##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2136550v1 #!genome-build-accession NCBI_Assembly:GCF_021365505.1 #!annotation-date 12/08/2022 16:36:52 #!annotation-source NCBI RefSeq ##sequence-region NZ_CP089940.1 1 4938018 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=65700 NZ_CP089940.1 RefSeq region 1 4938018 . + . ID=NZ_CP089940.1:1..4938018;Dbxref=taxon:65700;Is_circular=true;Name=ANONYMOUS;collection-date=2009;country=USA: Pennsylvania;gbkey=Src;genome=chromosome;isolation-source=Infected wild plant;mol_type=genomic DNA;nat-host=Cucurbita pepo ssp. texana;strain=BuffGH NZ_CP089940.1 RefSeq gene 1 1392 . + . ID=gene-LU631_RS00005;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=LU631_RS00005;old_locus_tag=LU631_00005 NZ_CP089940.1 Protein Homology CDS 1 1392 . + 0 ID=cds-WP_016192425.1;Parent=gene-LU631_RS00005;Dbxref=Genbank:WP_016192425.1;Name=WP_016192425.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161180.1;locus_tag=LU631_RS00005;product=chromosomal replication initiator protein DnaA;protein_id=WP_016192425.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1397 2497 . + . ID=gene-LU631_RS00010;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=LU631_RS00010;old_locus_tag=LU631_00010 NZ_CP089940.1 Protein Homology CDS 1397 2497 . + 0 ID=cds-WP_016192426.1;Parent=gene-LU631_RS00010;Dbxref=Genbank:WP_016192426.1;Name=WP_016192426.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=LU631_RS00010;product=DNA polymerase III subunit beta;protein_id=WP_016192426.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2649 3734 . + . ID=gene-LU631_RS00015;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=LU631_RS00015;old_locus_tag=LU631_00015 NZ_CP089940.1 Protein Homology CDS 2649 3734 . + 0 ID=cds-WP_016192427.1;Parent=gene-LU631_RS00015;Dbxref=Genbank:WP_016192427.1;Name=WP_016192427.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875688.1;locus_tag=LU631_RS00015;product=DNA replication/repair protein RecF;protein_id=WP_016192427.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3753 6158 . + . ID=gene-LU631_RS00020;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=LU631_RS00020;old_locus_tag=LU631_00020 NZ_CP089940.1 Protein Homology CDS 3753 6158 . + 0 ID=cds-WP_016192428.1;Parent=gene-LU631_RS00020;Dbxref=Genbank:WP_016192428.1;Name=WP_016192428.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=LU631_RS00020;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_016192428.1;transl_table=11 NZ_CP089940.1 RefSeq gene 6423 7019 . - . ID=gene-LU631_RS00025;Name=LU631_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00025;old_locus_tag=LU631_00025 NZ_CP089940.1 Protein Homology CDS 6423 7019 . - 0 ID=cds-WP_157275262.1;Parent=gene-LU631_RS00025;Dbxref=Genbank:WP_157275262.1;Name=WP_157275262.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.2;locus_tag=LU631_RS00025;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_157275262.1;transl_table=11 NZ_CP089940.1 RefSeq gene 7342 8151 . + . ID=gene-LU631_RS00030;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=LU631_RS00030;old_locus_tag=LU631_00030 NZ_CP089940.1 Protein Homology CDS 7342 8151 . + 0 ID=cds-WP_016192430.1;Parent=gene-LU631_RS00030;Dbxref=Genbank:WP_016192430.1;Name=WP_016192430.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443118.1;locus_tag=LU631_RS00030;product=sugar-phosphatase;protein_id=WP_016192430.1;transl_table=11 NZ_CP089940.1 RefSeq gene 8261 9532 . + . ID=gene-LU631_RS00035;Name=LU631_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00035;old_locus_tag=LU631_00035 NZ_CP089940.1 Protein Homology CDS 8261 9532 . + 0 ID=cds-WP_016192431.1;Parent=gene-LU631_RS00035;Dbxref=Genbank:WP_016192431.1;Name=WP_016192431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013507209.1;locus_tag=LU631_RS00035;product=DUF3748 domain-containing protein;protein_id=WP_016192431.1;transl_table=11 NZ_CP089940.1 RefSeq gene 9529 9900 . - . ID=gene-LU631_RS00040;Name=LU631_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00040;old_locus_tag=LU631_00040 NZ_CP089940.1 Protein Homology CDS 9529 9900 . - 0 ID=cds-WP_016192432.1;Parent=gene-LU631_RS00040;Dbxref=Genbank:WP_016192432.1;Name=WP_016192432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443116.1;locus_tag=LU631_RS00040;product=YceK/YidQ family lipoprotein;protein_id=WP_016192432.1;transl_table=11 NZ_CP089940.1 RefSeq gene 10200 10616 . + . ID=gene-LU631_RS00045;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=LU631_RS00045;old_locus_tag=LU631_00045 NZ_CP089940.1 Protein Homology CDS 10200 10616 . + 0 ID=cds-WP_016192433.1;Parent=gene-LU631_RS00045;Dbxref=Genbank:WP_016192433.1;Name=WP_016192433.1;gbkey=CDS;gene=ibpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010617843.1;locus_tag=LU631_RS00045;product=heat shock chaperone IbpA;protein_id=WP_016192433.1;transl_table=11 NZ_CP089940.1 RefSeq gene 10744 10977 . - . ID=gene-LU631_RS00050;Name=LU631_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00050;old_locus_tag=LU631_00050 NZ_CP089940.1 GeneMarkS-2+ CDS 10744 10977 . - 0 ID=cds-WP_016192434.1;Parent=gene-LU631_RS00050;Dbxref=Genbank:WP_016192434.1;Name=WP_016192434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS00050;product=hypothetical protein;protein_id=WP_016192434.1;transl_table=11 NZ_CP089940.1 RefSeq gene 11018 12268 . - . ID=gene-LU631_RS00055;Name=LU631_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00055;old_locus_tag=LU631_00055 NZ_CP089940.1 Protein Homology CDS 11018 12268 . - 0 ID=cds-WP_016192435.1;Parent=gene-LU631_RS00055;Dbxref=Genbank:WP_016192435.1;Name=WP_016192435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161159.1;locus_tag=LU631_RS00055;product=valine--pyruvate transaminase;protein_id=WP_016192435.1;transl_table=11 NZ_CP089940.1 RefSeq gene 12621 13382 . + . ID=gene-LU631_RS00060;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=LU631_RS00060;old_locus_tag=LU631_00060 NZ_CP089940.1 Protein Homology CDS 12621 13382 . + 0 ID=cds-WP_016192436.1;Parent=gene-LU631_RS00060;Dbxref=Genbank:WP_016192436.1;Name=WP_016192436.1;Ontology_term=GO:0000272,GO:0008678,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=2-deoxy-D-gluconate 3-dehydrogenase activity|0008678||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228631.1;locus_tag=LU631_RS00060;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_016192436.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 13473 14210 . - . ID=gene-LU631_RS00065;Name=LU631_RS00065;end_range=14210,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00065;old_locus_tag=LU631_00065;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 13473 14210 . - 0 ID=cds-LU631_RS00065;Parent=gene-LU631_RS00065;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0051287;end_range=14210,.;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004530.1;locus_tag=LU631_RS00065;partial=true;product=NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 14164 14787 . - . ID=gene-LU631_RS00070;Name=LU631_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00070;old_locus_tag=LU631_00070 NZ_CP089940.1 GeneMarkS-2+ CDS 14164 14787 . - 0 ID=cds-WP_016192438.1;Parent=gene-LU631_RS00070;Dbxref=Genbank:WP_016192438.1;Name=WP_016192438.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS00070;product=hypothetical protein;protein_id=WP_016192438.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 14931 15386 . - . ID=gene-LU631_RS00075;Name=LU631_RS00075;end_range=15386,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00075;old_locus_tag=LU631_00075;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 14931 15386 . - 0 ID=cds-LU631_RS00075;Parent=gene-LU631_RS00075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=15386,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542809.1;locus_tag=LU631_RS00075;partial=true;product=substrate-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 15538 16752 . - . ID=gene-LU631_RS00080;Name=LU631_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00080;old_locus_tag=LU631_00080 NZ_CP089940.1 Protein Homology CDS 15538 16752 . - 0 ID=cds-WP_046371879.1;Parent=gene-LU631_RS00080;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS00080;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 16761 17096 . - . ID=gene-LU631_RS00085;Name=LU631_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00085;old_locus_tag=LU631_00085 NZ_CP089940.1 GeneMarkS-2+ CDS 16761 17096 . - 0 ID=cds-WP_052734695.1;Parent=gene-LU631_RS00085;Dbxref=Genbank:WP_052734695.1;Name=WP_052734695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS00085;product=hypothetical protein;protein_id=WP_052734695.1;transl_table=11 NZ_CP089940.1 RefSeq gene 17928 18689 . + . ID=gene-LU631_RS00090;Name=LU631_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00090;old_locus_tag=LU631_00090 NZ_CP089940.1 Protein Homology CDS 17928 18689 . + 0 ID=cds-WP_040465790.1;Parent=gene-LU631_RS00090;Dbxref=Genbank:WP_040465790.1;Name=WP_040465790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006808839.1;locus_tag=LU631_RS00090;product=hypothetical protein;protein_id=WP_040465790.1;transl_table=11 NZ_CP089940.1 RefSeq gene 18763 19290 . + . ID=gene-LU631_RS00095;Name=LU631_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00095;old_locus_tag=LU631_00095 NZ_CP089940.1 Protein Homology CDS 18763 19290 . + 0 ID=cds-WP_016192441.1;Parent=gene-LU631_RS00095;Dbxref=Genbank:WP_016192441.1;Name=WP_016192441.1;Ontology_term=GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006808838.1;locus_tag=LU631_RS00095;product=CS1 type fimbrial major subunit;protein_id=WP_016192441.1;transl_table=11 NZ_CP089940.1 RefSeq gene 19353 21782 . + . ID=gene-LU631_RS00100;Name=LU631_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00100;old_locus_tag=LU631_00100 NZ_CP089940.1 Protein Homology CDS 19353 21782 . + 0 ID=cds-WP_051124405.1;Parent=gene-LU631_RS00100;Dbxref=Genbank:WP_051124405.1;Name=WP_051124405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016857075.1;locus_tag=LU631_RS00100;product=TcfC E-set like domain-containing protein;protein_id=WP_051124405.1;transl_table=11 NZ_CP089940.1 RefSeq gene 21782 23050 . + . ID=gene-LU631_RS00105;Name=LU631_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00105;old_locus_tag=LU631_00105 NZ_CP089940.1 Protein Homology CDS 21782 23050 . + 0 ID=cds-WP_040465776.1;Parent=gene-LU631_RS00105;Dbxref=Genbank:WP_040465776.1;Name=WP_040465776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008924632.1;locus_tag=LU631_RS00105;product=hypothetical protein;protein_id=WP_040465776.1;transl_table=11 NZ_CP089940.1 RefSeq gene 23139 23600 . - . ID=gene-LU631_RS00110;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=LU631_RS00110;old_locus_tag=LU631_00110 NZ_CP089940.1 Protein Homology CDS 23139 23600 . - 0 ID=cds-WP_016192443.1;Parent=gene-LU631_RS00110;Dbxref=Genbank:WP_016192443.1;Name=WP_016192443.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359557.1;locus_tag=LU631_RS00110;product=transcriptional regulator AsnC;protein_id=WP_016192443.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 23721 25586 . - . ID=gene-LU631_RS00115;Name=ovoA;end_range=25586,.;gbkey=Gene;gene=ovoA;gene_biotype=pseudogene;locus_tag=LU631_RS00115;old_locus_tag=LU631_00115;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 23721 25586 . - 0 ID=cds-LU631_RS00115;Parent=gene-LU631_RS00115;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=25586,.;gbkey=CDS;gene=ovoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666395.1;locus_tag=LU631_RS00115;partial=true;product=5-histidylcysteine sulfoxide synthase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 25741 26955 . - . ID=gene-LU631_RS00120;Name=LU631_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00120;old_locus_tag=LU631_00120 NZ_CP089940.1 Protein Homology CDS 25741 26955 . - 0 ID=cds-WP_046371879.1-2;Parent=gene-LU631_RS00120;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS00120;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 26964 27104 . - . ID=gene-LU631_RS00125;Name=LU631_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00125;old_locus_tag=LU631_00125 NZ_CP089940.1 GeneMarkS-2+ CDS 26964 27104 . - 0 ID=cds-WP_161796965.1;Parent=gene-LU631_RS00125;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS00125;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 27662 28129 . + . ID=gene-LU631_RS00130;Name=LU631_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00130;old_locus_tag=LU631_00130 NZ_CP089940.1 Protein Homology CDS 27662 28129 . + 0 ID=cds-WP_016191770.1;Parent=gene-LU631_RS00130;Dbxref=Genbank:WP_016191770.1;Name=WP_016191770.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036841.2;locus_tag=LU631_RS00130;product=HI1506-related protein;protein_id=WP_016191770.1;transl_table=11 NZ_CP089940.1 RefSeq gene 28126 28578 . + . ID=gene-LU631_RS00135;Name=LU631_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00135;old_locus_tag=LU631_00135 NZ_CP089940.1 Protein Homology CDS 28126 28578 . + 0 ID=cds-WP_016191771.1;Parent=gene-LU631_RS00135;Dbxref=Genbank:WP_016191771.1;Name=WP_016191771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185012.1;locus_tag=LU631_RS00135;product=DUF1320 family protein;protein_id=WP_016191771.1;transl_table=11 NZ_CP089940.1 RefSeq gene 28580 29146 . + . ID=gene-LU631_RS00140;Name=LU631_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00140;old_locus_tag=LU631_00140 NZ_CP089940.1 Protein Homology CDS 28580 29146 . + 0 ID=cds-WP_016191772.1;Parent=gene-LU631_RS00140;Dbxref=Genbank:WP_016191772.1;Name=WP_016191772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185013.1;locus_tag=LU631_RS00140;product=DUF1834 family protein;protein_id=WP_016191772.1;transl_table=11 NZ_CP089940.1 RefSeq gene 29139 29318 . + . ID=gene-LU631_RS00145;Name=LU631_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00145;old_locus_tag=LU631_00145 NZ_CP089940.1 Protein Homology CDS 29139 29318 . + 0 ID=cds-WP_016191773.1;Parent=gene-LU631_RS00145;Dbxref=Genbank:WP_016191773.1;Name=WP_016191773.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022401.2;locus_tag=LU631_RS00145;product=DUF2635 domain-containing protein;protein_id=WP_016191773.1;transl_table=11 NZ_CP089940.1 RefSeq gene 29318 30784 . + . ID=gene-LU631_RS00150;Name=LU631_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00150;old_locus_tag=LU631_00150 NZ_CP089940.1 Protein Homology CDS 29318 30784 . + 0 ID=cds-WP_016191774.1;Parent=gene-LU631_RS00150;Dbxref=Genbank:WP_016191774.1;Name=WP_016191774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185015.1;locus_tag=LU631_RS00150;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_016191774.1;transl_table=11 NZ_CP089940.1 RefSeq gene 30794 31153 . + . ID=gene-LU631_RS00155;Name=LU631_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00155;old_locus_tag=LU631_00155 NZ_CP089940.1 Protein Homology CDS 30794 31153 . + 0 ID=cds-WP_016191775.1;Parent=gene-LU631_RS00155;Dbxref=Genbank:WP_016191775.1;Name=WP_016191775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185016.1;locus_tag=LU631_RS00155;product=phage tail tube protein;protein_id=WP_016191775.1;transl_table=11 NZ_CP089940.1 RefSeq gene 31157 31510 . + . ID=gene-LU631_RS00160;Name=LU631_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00160;old_locus_tag=LU631_00160 NZ_CP089940.1 Protein Homology CDS 31157 31510 . + 0 ID=cds-WP_016191776.1;Parent=gene-LU631_RS00160;Dbxref=Genbank:WP_016191776.1;Name=WP_016191776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185017.1;locus_tag=LU631_RS00160;product=phage tail assembly protein;protein_id=WP_016191776.1;transl_table=11 NZ_CP089940.1 RefSeq gene 31512 31643 . + . ID=gene-LU631_RS25930;Name=LU631_RS25930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25930 NZ_CP089940.1 GeneMarkS-2+ CDS 31512 31643 . + 0 ID=cds-WP_016191777.1;Parent=gene-LU631_RS25930;Dbxref=Genbank:WP_016191777.1;Name=WP_016191777.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS25930;product=hypothetical protein;protein_id=WP_016191777.1;transl_table=11 NZ_CP089940.1 RefSeq gene 31644 33452 . + . ID=gene-LU631_RS00165;Name=LU631_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00165;old_locus_tag=LU631_00165 NZ_CP089940.1 GeneMarkS-2+ CDS 31644 33452 . + 0 ID=cds-WP_016191778.1;Parent=gene-LU631_RS00165;Dbxref=Genbank:WP_016191778.1;Name=WP_016191778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS00165;product=hypothetical protein;protein_id=WP_016191778.1;transl_table=11 NZ_CP089940.1 RefSeq gene 33452 34768 . + . ID=gene-LU631_RS00170;Name=LU631_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00170;old_locus_tag=LU631_00170 NZ_CP089940.1 Protein Homology CDS 33452 34768 . + 0 ID=cds-WP_016191779.1;Parent=gene-LU631_RS00170;Dbxref=Genbank:WP_016191779.1;Name=WP_016191779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847257.1;locus_tag=LU631_RS00170;product=DNA circularization N-terminal domain-containing protein;protein_id=WP_016191779.1;transl_table=11 NZ_CP089940.1 RefSeq gene 34752 35849 . + . ID=gene-LU631_RS00175;Name=LU631_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00175;old_locus_tag=LU631_00175 NZ_CP089940.1 Protein Homology CDS 34752 35849 . + 0 ID=cds-WP_016191780.1;Parent=gene-LU631_RS00175;Dbxref=Genbank:WP_016191780.1;Name=WP_016191780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012989062.1;locus_tag=LU631_RS00175;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_016191780.1;transl_table=11 NZ_CP089940.1 RefSeq gene 35846 36394 . + . ID=gene-LU631_RS00180;Name=LU631_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00180;old_locus_tag=LU631_00180 NZ_CP089940.1 Protein Homology CDS 35846 36394 . + 0 ID=cds-WP_016191781.1;Parent=gene-LU631_RS00180;Dbxref=Genbank:WP_016191781.1;Name=WP_016191781.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185021.1;locus_tag=LU631_RS00180;product=phage baseplate assembly protein V;protein_id=WP_016191781.1;transl_table=11 NZ_CP089940.1 RefSeq gene 36391 36831 . + . ID=gene-LU631_RS00185;Name=LU631_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00185;old_locus_tag=LU631_00185 NZ_CP089940.1 Protein Homology CDS 36391 36831 . + 0 ID=cds-WP_016191782.1;Parent=gene-LU631_RS00185;Dbxref=Genbank:WP_016191782.1;Name=WP_016191782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185022.1;locus_tag=LU631_RS00185;product=phage GP46 family protein;protein_id=WP_016191782.1;transl_table=11 NZ_CP089940.1 RefSeq gene 36832 37911 . + . ID=gene-LU631_RS00190;Name=LU631_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00190;old_locus_tag=LU631_00190 NZ_CP089940.1 Protein Homology CDS 36832 37911 . + 0 ID=cds-WP_016191783.1;Parent=gene-LU631_RS00190;Dbxref=Genbank:WP_016191783.1;Name=WP_016191783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012989059.1;locus_tag=LU631_RS00190;product=baseplate J/gp47 family protein;protein_id=WP_016191783.1;transl_table=11 NZ_CP089940.1 RefSeq gene 37902 38486 . + . ID=gene-LU631_RS00195;Name=LU631_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00195;old_locus_tag=LU631_00195 NZ_CP089940.1 Protein Homology CDS 37902 38486 . + 0 ID=cds-WP_016191784.1;Parent=gene-LU631_RS00195;Dbxref=Genbank:WP_016191784.1;Name=WP_016191784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012989058.1;locus_tag=LU631_RS00195;product=DUF2313 domain-containing protein;protein_id=WP_016191784.1;transl_table=11 NZ_CP089940.1 RefSeq gene 38489 39181 . + . ID=gene-LU631_RS00200;Name=LU631_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00200;old_locus_tag=LU631_00200 NZ_CP089940.1 Protein Homology CDS 38489 39181 . + 0 ID=cds-WP_016191785.1;Parent=gene-LU631_RS00200;Dbxref=Genbank:WP_016191785.1;Name=WP_016191785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246703.1;locus_tag=LU631_RS00200;product=phage tail protein;protein_id=WP_016191785.1;transl_table=11 NZ_CP089940.1 RefSeq gene 39181 39777 . + . ID=gene-LU631_RS00205;Name=LU631_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00205;old_locus_tag=LU631_00205 NZ_CP089940.1 Protein Homology CDS 39181 39777 . + 0 ID=cds-WP_016191786.1;Parent=gene-LU631_RS00205;Dbxref=Genbank:WP_016191786.1;Name=WP_016191786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243405.1;locus_tag=LU631_RS00205;product=tail fiber assembly protein;protein_id=WP_016191786.1;transl_table=11 NZ_CP089940.1 RefSeq gene 39982 40545 . - . ID=gene-LU631_RS00210;Name=LU631_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00210;old_locus_tag=LU631_00210 NZ_CP089940.1 Protein Homology CDS 39982 40545 . - 0 ID=cds-WP_016193058.1;Parent=gene-LU631_RS00210;Dbxref=Genbank:WP_016193058.1;Name=WP_016193058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369225.1;locus_tag=LU631_RS00210;product=DNA-3-methyladenine glycosylase I;protein_id=WP_016193058.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 40630 41209 . - . ID=gene-LU631_RS00215;Name=LU631_RS00215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00215;old_locus_tag=LU631_00215;pseudo=true NZ_CP089940.1 Protein Homology CDS 40630 41209 . - 0 ID=cds-LU631_RS00215;Parent=gene-LU631_RS00215;Note=frameshifted%3B internal stop;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359615.1;locus_tag=LU631_RS00215;product=glutathione S-transferase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 41268 42188 . - . ID=gene-LU631_RS00220;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=LU631_RS00220;old_locus_tag=LU631_00220 NZ_CP089940.1 Protein Homology CDS 41268 42188 . - 0 ID=cds-WP_016193055.1;Parent=gene-LU631_RS00220;Dbxref=Genbank:WP_016193055.1;Name=WP_016193055.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359616.1;locus_tag=LU631_RS00220;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_016193055.1;transl_table=11 NZ_CP089940.1 RefSeq gene 42530 43279 . + . ID=gene-LU631_RS00225;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=LU631_RS00225;old_locus_tag=LU631_00225 NZ_CP089940.1 Protein Homology CDS 42530 43279 . + 0 ID=cds-WP_040465912.1;Parent=gene-LU631_RS00225;Dbxref=Genbank:WP_040465912.1;Name=WP_040465912.1;Ontology_term=GO:0009061,GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359620.1;locus_tag=LU631_RS00225;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_040465912.1;transl_table=11 NZ_CP089940.1 RefSeq gene 43288 44064 . - . ID=gene-LU631_RS00230;Name=LU631_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00230;old_locus_tag=LU631_00230 NZ_CP089940.1 Protein Homology CDS 43288 44064 . - 0 ID=cds-WP_016193053.1;Parent=gene-LU631_RS00230;Dbxref=Genbank:WP_016193053.1;Name=WP_016193053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204532.1;locus_tag=LU631_RS00230;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_016193053.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 44236 45472 . + . ID=gene-LU631_RS00235;Name=LU631_RS00235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00235;old_locus_tag=LU631_00235;pseudo=true NZ_CP089940.1 Protein Homology CDS 44236 45472 . + 0 ID=cds-LU631_RS00235;Parent=gene-LU631_RS00235;Note=frameshifted;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542802.1;locus_tag=LU631_RS00235;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 45519 45953 . - . ID=gene-LU631_RS00240;Name=LU631_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00240;old_locus_tag=LU631_00240 NZ_CP089940.1 GeneMarkS-2+ CDS 45519 45953 . - 0 ID=cds-WP_016193052.1;Parent=gene-LU631_RS00240;Dbxref=Genbank:WP_016193052.1;Name=WP_016193052.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS00240;product=hypothetical protein;protein_id=WP_016193052.1;transl_table=11 NZ_CP089940.1 RefSeq gene 46115 47116 . + . ID=gene-LU631_RS00245;Name=LU631_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00245;old_locus_tag=LU631_00245 NZ_CP089940.1 Protein Homology CDS 46115 47116 . + 0 ID=cds-WP_016193051.1;Parent=gene-LU631_RS00245;Dbxref=Genbank:WP_016193051.1;Name=WP_016193051.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013884.2;locus_tag=LU631_RS00245;product=acyltransferase;protein_id=WP_016193051.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 47165 47266 . - . ID=gene-LU631_RS00250;Name=LU631_RS00250;end_range=47266,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00250;old_locus_tag=LU631_00250;partial=true;pseudo=true;start_range=.,47165 NZ_CP089940.1 Protein Homology CDS 47165 47266 . - 0 ID=cds-LU631_RS00250;Parent=gene-LU631_RS00250;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=47266,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007921764.1;locus_tag=LU631_RS00250;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,47165;transl_table=11 NZ_CP089940.1 RefSeq gene 47402 48019 . + . ID=gene-LU631_RS00255;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=LU631_RS00255;old_locus_tag=LU631_00255 NZ_CP089940.1 Protein Homology CDS 47402 48019 . + 0 ID=cds-WP_016193050.1;Parent=gene-LU631_RS00255;Dbxref=Genbank:WP_016193050.1;Name=WP_016193050.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462936.1;locus_tag=LU631_RS00255;product=superoxide dismutase [Mn];protein_id=WP_016193050.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 48282 49253 . + . ID=gene-LU631_RS00260;Name=LU631_RS00260;end_range=49253,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00260;old_locus_tag=LU631_00260;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 48282 49253 . + 0 ID=cds-LU631_RS00260;Parent=gene-LU631_RS00260;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;end_range=49253,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008460347.1;locus_tag=LU631_RS00260;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 49273 49635 . - . ID=gene-LU631_RS00265;Name=LU631_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00265;old_locus_tag=LU631_00265 NZ_CP089940.1 Protein Homology CDS 49273 49635 . - 0 ID=cds-WP_016193047.1;Parent=gene-LU631_RS00265;Dbxref=Genbank:WP_016193047.1;Name=WP_016193047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161101.1;locus_tag=LU631_RS00265;product=YibL family ribosome-associated protein;protein_id=WP_016193047.1;transl_table=11 NZ_CP089940.1 RefSeq gene 49707 50231 . - . ID=gene-LU631_RS00270;Name=LU631_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00270;old_locus_tag=LU631_00270 NZ_CP089940.1 Protein Homology CDS 49707 50231 . - 0 ID=cds-WP_016193046.1;Parent=gene-LU631_RS00270;Dbxref=Genbank:WP_016193046.1;Name=WP_016193046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121396.1;locus_tag=LU631_RS00270;product=MltR family transcriptional regulator;protein_id=WP_016193046.1;transl_table=11 NZ_CP089940.1 RefSeq gene 50331 51476 . - . ID=gene-LU631_RS00275;Name=LU631_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00275;old_locus_tag=LU631_00275 NZ_CP089940.1 Protein Homology CDS 50331 51476 . - 0 ID=cds-WP_016193045.1;Parent=gene-LU631_RS00275;Dbxref=Genbank:WP_016193045.1;Name=WP_016193045.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848038.1;locus_tag=LU631_RS00275;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_016193045.1;transl_table=11 NZ_CP089940.1 RefSeq gene 51570 53489 . - . ID=gene-LU631_RS00280;Name=LU631_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00280;old_locus_tag=LU631_00280 NZ_CP089940.1 Protein Homology CDS 51570 53489 . - 0 ID=cds-WP_016193044.1;Parent=gene-LU631_RS00280;Dbxref=Genbank:WP_016193044.1;Name=WP_016193044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204522.1;locus_tag=LU631_RS00280;product=PTS mannitol transporter subunit IICBA;protein_id=WP_016193044.1;transl_table=11 NZ_CP089940.1 RefSeq gene 53941 54150 . - . ID=gene-LU631_RS25935;Name=LU631_RS25935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25935 NZ_CP089940.1 Protein Homology CDS 53941 54150 . - 0 ID=cds-WP_252120247.1;Parent=gene-LU631_RS25935;Dbxref=Genbank:WP_252120247.1;Name=WP_252120247.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017866.2;locus_tag=LU631_RS25935;product=DUF943 family protein;protein_id=WP_252120247.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 54349 55124 . - . ID=gene-LU631_RS00290;Name=LU631_RS00290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00290;old_locus_tag=LU631_00290;partial=true;pseudo=true;start_range=.,54349 NZ_CP089940.1 Protein Homology CDS 54349 55124 . - 0 ID=cds-LU631_RS00290;Parent=gene-LU631_RS00290;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS00290;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,54349;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 55164 55853 . - . ID=gene-LU631_RS00295;Name=LU631_RS00295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00295;old_locus_tag=LU631_00295;pseudo=true NZ_CP089940.1 Protein Homology CDS 55164 55853 . - 0 ID=cds-LU631_RS00295;Parent=gene-LU631_RS00295;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=LU631_RS00295;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 55945 56526 . + . ID=gene-LU631_RS00300;Name=LU631_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00300;old_locus_tag=LU631_00300 NZ_CP089940.1 GeneMarkS-2+ CDS 55945 56526 . + 0 ID=cds-WP_016193039.1;Parent=gene-LU631_RS00300;Dbxref=Genbank:WP_016193039.1;Name=WP_016193039.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS00300;product=hypothetical protein;protein_id=WP_016193039.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 56616 57107 . - . ID=gene-LU631_RS00305;Name=LU631_RS00305;end_range=57107,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00305;old_locus_tag=LU631_00305;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 56616 57107 . - 0 ID=cds-LU631_RS00305;Parent=gene-LU631_RS00305;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=57107,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=LU631_RS00305;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 57465 58181 . - . ID=gene-LU631_RS00310;Name=LU631_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00310;old_locus_tag=LU631_00310 NZ_CP089940.1 Protein Homology CDS 57465 58181 . - 0 ID=cds-WP_016193035.1;Parent=gene-LU631_RS00310;Dbxref=Genbank:WP_016193035.1;Name=WP_016193035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539918.1;locus_tag=LU631_RS00310;product=DUF3053 domain-containing protein;protein_id=WP_016193035.1;transl_table=11 NZ_CP089940.1 RefSeq gene 58775 60844 . - . ID=gene-LU631_RS00315;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=LU631_RS00315;old_locus_tag=LU631_00315 NZ_CP089940.1 Protein Homology CDS 58775 60844 . - 0 ID=cds-WP_016193033.1;Parent=gene-LU631_RS00315;Dbxref=Genbank:WP_016193033.1;Name=WP_016193033.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462555.1;locus_tag=LU631_RS00315;product=glycine--tRNA ligase subunit beta;protein_id=WP_016193033.1;transl_table=11 NZ_CP089940.1 RefSeq gene 60854 61765 . - . ID=gene-LU631_RS00320;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=LU631_RS00320;old_locus_tag=LU631_00320 NZ_CP089940.1 Protein Homology CDS 60854 61765 . - 0 ID=cds-WP_016193032.1;Parent=gene-LU631_RS00320;Dbxref=Genbank:WP_016193032.1;Name=WP_016193032.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004387598.1;locus_tag=LU631_RS00320;product=glycine--tRNA ligase subunit alpha;protein_id=WP_016193032.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 61963 62971 . + . ID=gene-LU631_RS00325;Name=LU631_RS00325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00325;old_locus_tag=LU631_00325;pseudo=true NZ_CP089940.1 Protein Homology CDS 61963 62971 . + 0 ID=cds-LU631_RS00325;Parent=gene-LU631_RS00325;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359613.1;locus_tag=LU631_RS00325;product=acyltransferase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 62959 63815 . - . ID=gene-LU631_RS00330;Name=LU631_RS00330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00330;old_locus_tag=LU631_00330;pseudo=true NZ_CP089940.1 Protein Homology CDS 62959 63815 . - 0 ID=cds-LU631_RS00330;Parent=gene-LU631_RS00330;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008105253.1;locus_tag=LU631_RS00330;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 63792 64328 . - . ID=gene-LU631_RS00335;Name=LU631_RS00335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00335;old_locus_tag=LU631_00335;partial=true;pseudo=true;start_range=.,63792 NZ_CP089940.1 Protein Homology CDS 63792 64328 . - 0 ID=cds-LU631_RS00335;Parent=gene-LU631_RS00335;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436757.1;locus_tag=LU631_RS00335;partial=true;product=isochorismatase family protein;pseudo=true;start_range=.,63792;transl_table=11 NZ_CP089940.1 RefSeq gene 65191 65436 . - . ID=gene-LU631_RS00340;Name=LU631_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00340;old_locus_tag=LU631_00340 NZ_CP089940.1 GeneMarkS-2+ CDS 65191 65436 . - 0 ID=cds-WP_016193029.1;Parent=gene-LU631_RS00340;Dbxref=Genbank:WP_016193029.1;Name=WP_016193029.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS00340;product=hypothetical protein;protein_id=WP_016193029.1;transl_table=11 NZ_CP089940.1 RefSeq gene 65724 66503 . + . ID=gene-LU631_RS00345;Name=LU631_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00345;old_locus_tag=LU631_00345 NZ_CP089940.1 Protein Homology CDS 65724 66503 . + 0 ID=cds-WP_161796989.1;Parent=gene-LU631_RS00345;Dbxref=Genbank:WP_161796989.1;Name=WP_161796989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147010.1;locus_tag=LU631_RS00345;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_161796989.1;transl_table=11 NZ_CP089940.1 RefSeq gene 66529 67806 . + . ID=gene-LU631_RS00350;Name=LU631_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00350;old_locus_tag=LU631_00350 NZ_CP089940.1 Protein Homology CDS 66529 67806 . + 0 ID=cds-WP_040465910.1;Parent=gene-LU631_RS00350;Dbxref=Genbank:WP_040465910.1;Name=WP_040465910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838470.1;locus_tag=LU631_RS00350;product=glycoside hydrolase family 10 protein;protein_id=WP_040465910.1;transl_table=11 NZ_CP089940.1 RefSeq gene 68106 68588 . + . ID=gene-LU631_RS00355;Name=LU631_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00355;old_locus_tag=LU631_00355 NZ_CP089940.1 Protein Homology CDS 68106 68588 . + 0 ID=cds-WP_016193026.1;Parent=gene-LU631_RS00355;Dbxref=Genbank:WP_016193026.1;Name=WP_016193026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204422.1;locus_tag=LU631_RS00355;product=RcnB family protein;protein_id=WP_016193026.1;transl_table=11 NZ_CP089940.1 RefSeq gene 68618 69208 . - . ID=gene-LU631_RS00360;Name=LU631_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00360;old_locus_tag=LU631_00360 NZ_CP089940.1 Protein Homology CDS 68618 69208 . - 0 ID=cds-WP_016193025.1;Parent=gene-LU631_RS00360;Dbxref=Genbank:WP_016193025.1;Name=WP_016193025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204419.1;locus_tag=LU631_RS00360;product=HD domain-containing protein;protein_id=WP_016193025.1;transl_table=11 NZ_CP089940.1 RefSeq gene 69270 69728 . + . ID=gene-LU631_RS00365;Name=LU631_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00365;old_locus_tag=LU631_00365 NZ_CP089940.1 Protein Homology CDS 69270 69728 . + 0 ID=cds-WP_016193024.1;Parent=gene-LU631_RS00365;Dbxref=Genbank:WP_016193024.1;Name=WP_016193024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161070.1;locus_tag=LU631_RS00365;product=MarR family transcriptional regulator;protein_id=WP_016193024.1;transl_table=11 NZ_CP089940.1 RefSeq gene 69834 70262 . + . ID=gene-LU631_RS00370;Name=LU631_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00370;old_locus_tag=LU631_00370 NZ_CP089940.1 Protein Homology CDS 69834 70262 . + 0 ID=cds-WP_016193023.1;Parent=gene-LU631_RS00370;Dbxref=Genbank:WP_016193023.1;Name=WP_016193023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161069.1;locus_tag=LU631_RS00370;product=organic hydroperoxide resistance protein;protein_id=WP_016193023.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 70540 72238 . + . ID=gene-LU631_RS00375;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=pseudogene;locus_tag=LU631_RS00375;old_locus_tag=LU631_00375;pseudo=true NZ_CP089940.1 Protein Homology CDS 70540 72238 . + 0 ID=cds-LU631_RS00375;Parent=gene-LU631_RS00375;Note=frameshifted;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848053.1;locus_tag=LU631_RS00375;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 72332 74293 . - . ID=gene-LU631_RS00380;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=LU631_RS00380;old_locus_tag=LU631_00380 NZ_CP089940.1 Protein Homology CDS 72332 74293 . - 0 ID=cds-WP_016193022.1;Parent=gene-LU631_RS00380;Dbxref=Genbank:WP_016193022.1;Name=WP_016193022.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071034.1;locus_tag=LU631_RS00380;product=catecholate siderophore receptor CirA;protein_id=WP_016193022.1;transl_table=11 NZ_CP089940.1 RefSeq gene 74342 75493 . - . ID=gene-LU631_RS00385;Name=LU631_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00385;old_locus_tag=LU631_00385 NZ_CP089940.1 Protein Homology CDS 74342 75493 . - 0 ID=cds-WP_016193021.1;Parent=gene-LU631_RS00385;Dbxref=Genbank:WP_016193021.1;Name=WP_016193021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004700605.1;locus_tag=LU631_RS00385;product=ABC transporter substrate-binding protein;protein_id=WP_016193021.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 76075 76414 . + . ID=gene-LU631_RS00390;Name=LU631_RS00390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00390;old_locus_tag=LU631_00390;pseudo=true NZ_CP089940.1 Protein Homology CDS 76075 76414 . + 0 ID=cds-LU631_RS00390;Parent=gene-LU631_RS00390;Note=frameshifted;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201803.1;locus_tag=LU631_RS00390;product=SMR family transporter;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 77029 78639 . + . ID=gene-LU631_RS00395;Name=LU631_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00395;old_locus_tag=LU631_00395 NZ_CP089940.1 Protein Homology CDS 77029 78639 . + 0 ID=cds-WP_016193019.1;Parent=gene-LU631_RS00395;Dbxref=Genbank:WP_016193019.1;Name=WP_016193019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106234.1;locus_tag=LU631_RS00395;product=ABC transporter substrate-binding protein;protein_id=WP_016193019.1;transl_table=11 NZ_CP089940.1 RefSeq gene 78852 79871 . + . ID=gene-LU631_RS00400;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=LU631_RS00400;old_locus_tag=LU631_00400 NZ_CP089940.1 Protein Homology CDS 78852 79871 . + 0 ID=cds-WP_016193018.1;Parent=gene-LU631_RS00400;Dbxref=Genbank:WP_016193018.1;Name=WP_016193018.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=LU631_RS00400;product=dipeptide ABC transporter permease DppB;protein_id=WP_016193018.1;transl_table=11 NZ_CP089940.1 RefSeq gene 79882 80784 . + . ID=gene-LU631_RS00405;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=LU631_RS00405;old_locus_tag=LU631_00405 NZ_CP089940.1 Protein Homology CDS 79882 80784 . + 0 ID=cds-WP_016193017.1;Parent=gene-LU631_RS00405;Dbxref=Genbank:WP_016193017.1;Name=WP_016193017.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010257425.1;locus_tag=LU631_RS00405;product=dipeptide ABC transporter permease DppC;protein_id=WP_016193017.1;transl_table=11 NZ_CP089940.1 RefSeq gene 80794 81780 . + . ID=gene-LU631_RS00410;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=LU631_RS00410;old_locus_tag=LU631_00410 NZ_CP089940.1 Protein Homology CDS 80794 81780 . + 0 ID=cds-WP_016193016.1;Parent=gene-LU631_RS00410;Dbxref=Genbank:WP_016193016.1;Name=WP_016193016.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010257423.1;locus_tag=LU631_RS00410;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_016193016.1;transl_table=11 NZ_CP089940.1 RefSeq gene 81752 82771 . + . ID=gene-LU631_RS00415;Name=LU631_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00415;old_locus_tag=LU631_00415 NZ_CP089940.1 Protein Homology CDS 81752 82771 . + 0 ID=cds-WP_152664292.1;Parent=gene-LU631_RS00415;Dbxref=Genbank:WP_152664292.1;Name=WP_152664292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024032.1;locus_tag=LU631_RS00415;product=ABC transporter ATP-binding protein;protein_id=WP_152664292.1;transl_table=11 NZ_CP089940.1 RefSeq gene 82916 83944 . + . ID=gene-LU631_RS00420;Name=LU631_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00420;old_locus_tag=LU631_00420 NZ_CP089940.1 GeneMarkS-2+ CDS 82916 83944 . + 0 ID=cds-WP_046372112.1;Parent=gene-LU631_RS00420;Dbxref=Genbank:WP_046372112.1;Name=WP_046372112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS00420;product=hypothetical protein;protein_id=WP_046372112.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 83976 84319 . + . ID=gene-LU631_RS00425;Name=LU631_RS00425;end_range=84319,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00425;old_locus_tag=LU631_00425;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 83976 84319 . + 0 ID=cds-LU631_RS00425;Parent=gene-LU631_RS00425;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=84319,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU631_RS00425;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 84420 85460 . + . ID=gene-LU631_RS00430;Name=LU631_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00430;old_locus_tag=LU631_00430 NZ_CP089940.1 Protein Homology CDS 84420 85460 . + 0 ID=cds-WP_046371813.1;Parent=gene-LU631_RS00430;Dbxref=Genbank:WP_046371813.1;Name=WP_046371813.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS00430;product=IS481 family transposase;protein_id=WP_046371813.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 85519 85881 . + . ID=gene-LU631_RS00435;Name=LU631_RS00435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00435;old_locus_tag=LU631_00435;partial=true;pseudo=true;start_range=.,85519 NZ_CP089940.1 Protein Homology CDS 85519 85881 . + 0 ID=cds-LU631_RS00435;Parent=gene-LU631_RS00435;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU631_RS00435;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,85519;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 86100 86299 . + . ID=gene-LU631_RS00440;Name=LU631_RS00440;end_range=86299,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00440;old_locus_tag=LU631_00440;partial=true;pseudo=true;start_range=.,86100 NZ_CP089940.1 Protein Homology CDS 86100 86299 . + 0 ID=cds-LU631_RS00440;Parent=gene-LU631_RS00440;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006011,GO:0016020;end_range=86299,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=UDP-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594991.1;locus_tag=LU631_RS00440;partial=true;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;pseudo=true;start_range=.,86100;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 86314 87656 . - . ID=gene-LU631_RS00445;Name=LU631_RS00445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00445;old_locus_tag=LU631_00445;pseudo=true NZ_CP089940.1 Protein Homology CDS 86314 87656 . - 0 ID=cds-LU631_RS00445;Parent=gene-LU631_RS00445;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS00445;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 87787 88218 . - . ID=gene-LU631_RS25940;Name=LU631_RS25940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25940 NZ_CP089940.1 Protein Homology CDS 87787 88218 . - 0 ID=cds-WP_046372013.1;Parent=gene-LU631_RS25940;Dbxref=Genbank:WP_046372013.1;Name=WP_046372013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS25940;product=IS91 family transposase;protein_id=WP_046372013.1;transl_table=11 NZ_CP089940.1 RefSeq gene 88230 89000 . - . ID=gene-LU631_RS25945;Name=LU631_RS25945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25945 NZ_CP089940.1 Protein Homology CDS 88230 89000 . - 0 ID=cds-WP_267921497.1;Parent=gene-LU631_RS25945;Dbxref=Genbank:WP_267921497.1;Name=WP_267921497.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS25945;product=transposase zinc-binding domain-containing protein;protein_id=WP_267921497.1;transl_table=11 NZ_CP089940.1 RefSeq gene 89009 89149 . - . ID=gene-LU631_RS00455;Name=LU631_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00455;old_locus_tag=LU631_00455 NZ_CP089940.1 GeneMarkS-2+ CDS 89009 89149 . - 0 ID=cds-WP_161796965.1-2;Parent=gene-LU631_RS00455;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS00455;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 89683 90018 . - . ID=gene-LU631_RS25950;Name=LU631_RS25950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25950 NZ_CP089940.1 Protein Homology CDS 89683 90018 . - 0 ID=cds-WP_233481440.1;Parent=gene-LU631_RS25950;Dbxref=Genbank:WP_233481440.1;Name=WP_233481440.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS25950;product=hypothetical protein;protein_id=WP_233481440.1;transl_table=11 NZ_CP089940.1 RefSeq gene 90030 90908 . - . ID=gene-LU631_RS00460;Name=LU631_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00460;old_locus_tag=LU631_00460 NZ_CP089940.1 Protein Homology CDS 90030 90908 . - 0 ID=cds-WP_267958441.1;Parent=gene-LU631_RS00460;Dbxref=Genbank:WP_267958441.1;Name=WP_267958441.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU631_RS00460;product=IS91 family transposase;protein_id=WP_267958441.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 91004 91231 . + . ID=gene-LU631_RS00465;Name=LU631_RS00465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00465;old_locus_tag=LU631_00465;partial=true;pseudo=true;start_range=.,91004 NZ_CP089940.1 Protein Homology CDS 91004 91231 . + 0 ID=cds-LU631_RS00465;Parent=gene-LU631_RS00465;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=LU631_RS00465;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,91004;transl_table=11 NZ_CP089940.1 RefSeq gene 91391 91759 . - . ID=gene-LU631_RS00470;Name=LU631_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00470;old_locus_tag=LU631_00470 NZ_CP089940.1 GeneMarkS-2+ CDS 91391 91759 . - 0 ID=cds-WP_152664222.1;Parent=gene-LU631_RS00470;Dbxref=Genbank:WP_152664222.1;Name=WP_152664222.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS00470;product=hypothetical protein;protein_id=WP_152664222.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 92391 92485 . + . ID=gene-LU631_RS00475;Name=LU631_RS00475;end_range=92485,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00475;old_locus_tag=LU631_00475;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 92391 92485 . + 0 ID=cds-LU631_RS00475;Parent=gene-LU631_RS00475;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=92485,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=LU631_RS00475;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 92504 93201 . - . ID=gene-LU631_RS00480;Name=LU631_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00480;old_locus_tag=LU631_00480 NZ_CP089940.1 Protein Homology CDS 92940 93201 . - 0 ID=cds-WP_233481968.1;Parent=gene-LU631_RS00480;Dbxref=Genbank:WP_233481968.1;Name=WP_233481968.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS00480;product=IS1 family transposase;protein_id=WP_233481968.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 92504 92940 . - 2 ID=cds-WP_233481968.1;Parent=gene-LU631_RS00480;Dbxref=Genbank:WP_233481968.1;Name=WP_233481968.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS00480;product=IS1 family transposase;protein_id=WP_233481968.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 93285 93434 . - . ID=gene-LU631_RS00485;Name=LU631_RS00485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00485;old_locus_tag=LU631_00485;partial=true;pseudo=true;start_range=.,93285 NZ_CP089940.1 Protein Homology CDS 93285 93434 . - 0 ID=cds-LU631_RS00485;Parent=gene-LU631_RS00485;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006674370.1;locus_tag=LU631_RS00485;partial=true;product=replicase;pseudo=true;start_range=.,93285;transl_table=11 NZ_CP089940.1 RefSeq gene 93912 94130 . - . ID=gene-LU631_RS00490;Name=LU631_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00490;old_locus_tag=LU631_00490 NZ_CP089940.1 GeneMarkS-2+ CDS 93912 94130 . - 0 ID=cds-WP_233481969.1;Parent=gene-LU631_RS00490;Dbxref=Genbank:WP_233481969.1;Name=WP_233481969.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS00490;product=hypothetical protein;protein_id=WP_233481969.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 94969 95102 . - . ID=gene-LU631_RS00495;Name=LU631_RS00495;end_range=95102,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00495;old_locus_tag=LU631_00495;partial=true;pseudo=true;start_range=.,94969 NZ_CP089940.1 Protein Homology CDS 94969 95102 . - 0 ID=cds-LU631_RS00495;Parent=gene-LU631_RS00495;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=95102,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612362.1;locus_tag=LU631_RS00495;partial=true;product=IS91 family transposase;pseudo=true;start_range=.,94969;transl_table=11 NZ_CP089940.1 RefSeq gene 95523 96254 . + . ID=gene-LU631_RS00500;Name=LU631_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00500;old_locus_tag=LU631_00500 NZ_CP089940.1 Protein Homology CDS 95523 96254 . + 0 ID=cds-WP_046372116.1;Parent=gene-LU631_RS00500;Dbxref=Genbank:WP_046372116.1;Name=WP_046372116.1;Ontology_term=GO:0030248;gbkey=CDS;go_function=cellulose binding|0030248||IEA;inference=COORDINATES: protein motif:HMM:NF041144.1;locus_tag=LU631_RS00500;product=expansin EXLX1 family cellulose-binding protein;protein_id=WP_046372116.1;transl_table=11 NZ_CP089940.1 RefSeq gene 96357 97244 . + . ID=gene-LU631_RS00505;Name=LU631_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00505;old_locus_tag=LU631_00505 NZ_CP089940.1 Protein Homology CDS 96357 97244 . + 0 ID=cds-WP_233481970.1;Parent=gene-LU631_RS00505;Dbxref=Genbank:WP_233481970.1;Name=WP_233481970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122111.1;locus_tag=LU631_RS00505;product=glycoside hydrolase family 5 protein;protein_id=WP_233481970.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 97341 98037 . - . ID=gene-LU631_RS00510;Name=LU631_RS00510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00510;old_locus_tag=LU631_00510;pseudo=true NZ_CP089940.1 Protein Homology CDS 97341 98037 . - 0 ID=cds-LU631_RS00510;Parent=gene-LU631_RS00510;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013183412.1;locus_tag=LU631_RS00510;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 98296 99495 . - . ID=gene-LU631_RS00515;Name=LU631_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00515;old_locus_tag=LU631_00515 NZ_CP089940.1 Protein Homology CDS 98296 99495 . - 0 ID=cds-WP_046372110.1;Parent=gene-LU631_RS00515;Dbxref=Genbank:WP_046372110.1;Name=WP_046372110.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU631_RS00515;product=IS91 family transposase;protein_id=WP_046372110.1;transl_table=11 NZ_CP089940.1 RefSeq gene 99504 99692 . - . ID=gene-LU631_RS00520;Name=LU631_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00520;old_locus_tag=LU631_00520 NZ_CP089940.1 Protein Homology CDS 99504 99692 . - 0 ID=cds-WP_020322936.1;Parent=gene-LU631_RS00520;Dbxref=Genbank:WP_020322936.1;Name=WP_020322936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192885.1;locus_tag=LU631_RS00520;product=hypothetical protein;protein_id=WP_020322936.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 99810 100025 . + . ID=gene-LU631_RS00525;Name=LU631_RS00525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00525;old_locus_tag=LU631_00525;partial=true;pseudo=true;start_range=.,99810 NZ_CP089940.1 Protein Homology CDS 99810 100025 . + 0 ID=cds-LU631_RS00525;Parent=gene-LU631_RS00525;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006508,GO:0004175,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=endopeptidase activity|0004175||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026564.1;locus_tag=LU631_RS00525;partial=true;product=omptin family outer membrane protease;pseudo=true;start_range=.,99810;transl_table=11 NZ_CP089940.1 RefSeq gene 100990 102360 . + . ID=gene-LU631_RS00530;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=LU631_RS00530;old_locus_tag=LU631_00530 NZ_CP089940.1 Protein Homology CDS 100990 102360 . + 0 ID=cds-WP_016193005.1;Parent=gene-LU631_RS00530;Dbxref=Genbank:WP_016193005.1;Name=WP_016193005.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443139.1;locus_tag=LU631_RS00530;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_016193005.1;transl_table=11 NZ_CP089940.1 RefSeq gene 102523 104352 . + . ID=gene-LU631_RS00535;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LU631_RS00535;old_locus_tag=LU631_00535 NZ_CP089940.1 Protein Homology CDS 102523 104352 . + 0 ID=cds-WP_016193004.1;Parent=gene-LU631_RS00535;Dbxref=Genbank:WP_016193004.1;Name=WP_016193004.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=LU631_RS00535;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_016193004.1;transl_table=11 NZ_CP089940.1 RefSeq gene 104597 105637 . + . ID=gene-LU631_RS00540;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=LU631_RS00540;old_locus_tag=LU631_00540 NZ_CP089940.1 Protein Homology CDS 104597 105637 . + 0 ID=cds-WP_016193003.1;Parent=gene-LU631_RS00540;Dbxref=Genbank:WP_016193003.1;Name=WP_016193003.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204579.1;locus_tag=LU631_RS00540;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_016193003.1;transl_table=11 NZ_CP089940.1 RefSeq gene 105720 106682 . + . ID=gene-LU631_RS00545;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=LU631_RS00545;old_locus_tag=LU631_00545 NZ_CP089940.1 Protein Homology CDS 105720 106682 . + 0 ID=cds-WP_016193002.1;Parent=gene-LU631_RS00545;Dbxref=Genbank:WP_016193002.1;Name=WP_016193002.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017349360.1;locus_tag=LU631_RS00545;product=phosphate ABC transporter permease PstC;protein_id=WP_016193002.1;transl_table=11 NZ_CP089940.1 RefSeq gene 106679 107566 . + . ID=gene-LU631_RS00550;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=LU631_RS00550;old_locus_tag=LU631_00550 NZ_CP089940.1 Protein Homology CDS 106679 107566 . + 0 ID=cds-WP_016193001.1;Parent=gene-LU631_RS00550;Dbxref=Genbank:WP_016193001.1;Name=WP_016193001.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161214.1;locus_tag=LU631_RS00550;product=phosphate ABC transporter permease PstA;protein_id=WP_016193001.1;transl_table=11 NZ_CP089940.1 RefSeq gene 107610 108380 . + . ID=gene-LU631_RS00555;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=LU631_RS00555;old_locus_tag=LU631_00555 NZ_CP089940.1 Protein Homology CDS 107610 108380 . + 0 ID=cds-WP_016193000.1;Parent=gene-LU631_RS00555;Dbxref=Genbank:WP_016193000.1;Name=WP_016193000.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161212.1;locus_tag=LU631_RS00555;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_016193000.1;transl_table=11 NZ_CP089940.1 RefSeq gene 108398 109135 . + . ID=gene-LU631_RS00560;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=LU631_RS00560;old_locus_tag=LU631_00560 NZ_CP089940.1 Protein Homology CDS 108398 109135 . + 0 ID=cds-WP_016192999.1;Parent=gene-LU631_RS00560;Dbxref=Genbank:WP_016192999.1;Name=WP_016192999.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=cellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161204.1;locus_tag=LU631_RS00560;product=phosphate signaling complex protein PhoU;protein_id=WP_016192999.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 109556 110376 . - . ID=gene-LU631_RS00565;Name=LU631_RS00565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00565;old_locus_tag=LU631_00565;pseudo=true NZ_CP089940.1 Protein Homology CDS 109556 110376 . - 0 ID=cds-LU631_RS00565;Parent=gene-LU631_RS00565;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS00565;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 110830 112113 . + . ID=gene-LU631_RS00570;Name=LU631_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00570;old_locus_tag=LU631_00570 NZ_CP089940.1 Protein Homology CDS 110830 112113 . + 0 ID=cds-WP_016192996.1;Parent=gene-LU631_RS00570;Dbxref=Genbank:WP_016192996.1;Name=WP_016192996.1;Ontology_term=GO:0006865,GO:0015171,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015698783.1;locus_tag=LU631_RS00570;product=serine/threonine transporter;protein_id=WP_016192996.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 112353 113286 . - . ID=gene-LU631_RS25955;Name=LU631_RS25955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25955;partial=true;pseudo=true;start_range=.,112353 NZ_CP089940.1 Protein Homology CDS 112353 113286 . - 0 ID=cds-LU631_RS25955;Parent=gene-LU631_RS25955;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947205.1;locus_tag=LU631_RS25955;partial=true;product=IS91 family transposase;pseudo=true;start_range=.,112353;transl_table=11 NZ_CP089940.1 RefSeq gene 113295 113483 . - . ID=gene-LU631_RS00590;Name=LU631_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00590;old_locus_tag=LU631_00590 NZ_CP089940.1 Protein Homology CDS 113295 113483 . - 0 ID=cds-WP_040465908.1;Parent=gene-LU631_RS00590;Dbxref=Genbank:WP_040465908.1;Name=WP_040465908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322936.1;locus_tag=LU631_RS00590;product=hypothetical protein;protein_id=WP_040465908.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 113599 114303 . - . ID=gene-LU631_RS00595;Name=LU631_RS00595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00595;old_locus_tag=LU631_00595;partial=true;pseudo=true;start_range=.,113599 NZ_CP089940.1 Protein Homology CDS 113599 114303 . - 0 ID=cds-LU631_RS00595;Parent=gene-LU631_RS00595;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858395.1;locus_tag=LU631_RS00595;partial=true;product=IS91 family transposase;pseudo=true;start_range=.,113599;transl_table=11 NZ_CP089940.1 RefSeq gene 114312 114500 . - . ID=gene-LU631_RS00600;Name=LU631_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00600;old_locus_tag=LU631_00600 NZ_CP089940.1 Protein Homology CDS 114312 114500 . - 0 ID=cds-WP_020322936.1-2;Parent=gene-LU631_RS00600;Dbxref=Genbank:WP_020322936.1;Name=WP_020322936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192885.1;locus_tag=LU631_RS00600;product=hypothetical protein;protein_id=WP_020322936.1;transl_table=11 NZ_CP089940.1 RefSeq gene 115243 116784 . + . ID=gene-LU631_RS00605;Name=LU631_RS00605;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU631_RS00605;old_locus_tag=LU631_00605 NZ_CP089940.1 cmsearch rRNA 115243 116784 . + . ID=rna-LU631_RS00605;Parent=gene-LU631_RS00605;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS00605;product=16S ribosomal RNA NZ_CP089940.1 cmsearch exon 115243 116784 . + . ID=exon-LU631_RS00605-1;Parent=rna-LU631_RS00605;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS00605;product=16S ribosomal RNA NZ_CP089940.1 RefSeq gene 116857 116932 . + . ID=gene-LU631_RS00610;Name=LU631_RS00610;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS00610;old_locus_tag=LU631_00610 NZ_CP089940.1 tRNAscan-SE tRNA 116857 116932 . + . ID=rna-LU631_RS00610;Parent=gene-LU631_RS00610;anticodon=(pos:116891..116893);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS00610;product=tRNA-Glu NZ_CP089940.1 tRNAscan-SE exon 116857 116932 . + . ID=exon-LU631_RS00610-1;Parent=rna-LU631_RS00610;anticodon=(pos:116891..116893);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS00610;product=tRNA-Glu NZ_CP089940.1 RefSeq gene 117135 120037 . + . ID=gene-LU631_RS00615;Name=LU631_RS00615;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU631_RS00615;old_locus_tag=LU631_00615 NZ_CP089940.1 cmsearch rRNA 117135 120037 . + . ID=rna-LU631_RS00615;Parent=gene-LU631_RS00615;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS00615;product=23S ribosomal RNA NZ_CP089940.1 cmsearch exon 117135 120037 . + . ID=exon-LU631_RS00615-1;Parent=rna-LU631_RS00615;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS00615;product=23S ribosomal RNA NZ_CP089940.1 RefSeq gene 120241 120356 . + . ID=gene-LU631_RS00620;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LU631_RS00620;old_locus_tag=LU631_00620 NZ_CP089940.1 cmsearch rRNA 120241 120356 . + . ID=rna-LU631_RS00620;Parent=gene-LU631_RS00620;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS00620;product=5S ribosomal RNA NZ_CP089940.1 cmsearch exon 120241 120356 . + . ID=exon-LU631_RS00620-1;Parent=rna-LU631_RS00620;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS00620;product=5S ribosomal RNA NZ_CP089940.1 RefSeq gene 120468 120544 . + . ID=gene-LU631_RS00625;Name=LU631_RS00625;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS00625;old_locus_tag=LU631_00625 NZ_CP089940.1 tRNAscan-SE tRNA 120468 120544 . + . ID=rna-LU631_RS00625;Parent=gene-LU631_RS00625;anticodon=(pos:120502..120504);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS00625;product=tRNA-Asp NZ_CP089940.1 tRNAscan-SE exon 120468 120544 . + . ID=exon-LU631_RS00625-1;Parent=rna-LU631_RS00625;anticodon=(pos:120502..120504);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS00625;product=tRNA-Asp NZ_CP089940.1 RefSeq gene 120552 120627 . + . ID=gene-LU631_RS00630;Name=LU631_RS00630;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS00630;old_locus_tag=LU631_00630 NZ_CP089940.1 tRNAscan-SE tRNA 120552 120627 . + . ID=rna-LU631_RS00630;Parent=gene-LU631_RS00630;anticodon=(pos:120585..120587);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS00630;product=tRNA-Trp NZ_CP089940.1 tRNAscan-SE exon 120552 120627 . + . ID=exon-LU631_RS00630-1;Parent=rna-LU631_RS00630;anticodon=(pos:120585..120587);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS00630;product=tRNA-Trp NZ_CP089940.1 RefSeq gene 120846 121543 . - . ID=gene-LU631_RS00635;Name=LU631_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00635;old_locus_tag=LU631_00635 NZ_CP089940.1 Protein Homology CDS 121294 121543 . - 0 ID=cds-WP_233481971.1;Parent=gene-LU631_RS00635;Dbxref=Genbank:WP_233481971.1;Name=WP_233481971.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS00635;product=IS1 family transposase;protein_id=WP_233481971.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 120846 121294 . - 2 ID=cds-WP_233481971.1;Parent=gene-LU631_RS00635;Dbxref=Genbank:WP_233481971.1;Name=WP_233481971.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS00635;product=IS1 family transposase;protein_id=WP_233481971.1;transl_table=11 NZ_CP089940.1 RefSeq gene 121691 122515 . - . ID=gene-LU631_RS00640;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=LU631_RS00640;old_locus_tag=LU631_00640 NZ_CP089940.1 Protein Homology CDS 121691 122515 . - 0 ID=cds-WP_016191556.1;Parent=gene-LU631_RS00640;Dbxref=Genbank:WP_016191556.1;Name=WP_016191556.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200219.1;locus_tag=LU631_RS00640;product=HTH-type transcriptional regulator HdfR;protein_id=WP_016191556.1;transl_table=11 NZ_CP089940.1 RefSeq gene 122636 122974 . + . ID=gene-LU631_RS00645;Name=LU631_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00645;old_locus_tag=LU631_00645 NZ_CP089940.1 Protein Homology CDS 122636 122974 . + 0 ID=cds-WP_016191555.1;Parent=gene-LU631_RS00645;Dbxref=Genbank:WP_016191555.1;Name=WP_016191555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312726.1;locus_tag=LU631_RS00645;product=DUF413 domain-containing protein;protein_id=WP_016191555.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 123238 123629 . + . ID=gene-LU631_RS00650;Name=LU631_RS00650;end_range=123629,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00650;old_locus_tag=LU631_00650;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 123238 123629 . + 0 ID=cds-LU631_RS00650;Parent=gene-LU631_RS00650;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=123629,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=LU631_RS00650;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 123766 124729 . + . ID=gene-LU631_RS00655;Name=LU631_RS00655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00655;old_locus_tag=LU631_00655;pseudo=true NZ_CP089940.1 Protein Homology CDS 123766 124729 . + 0 ID=cds-LU631_RS00655;Parent=gene-LU631_RS00655;Note=frameshifted;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236494.1;locus_tag=LU631_RS00655;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 124807 125915 . + . ID=gene-LU631_RS00660;Name=LU631_RS00660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00660;old_locus_tag=LU631_00660;pseudo=true NZ_CP089940.1 Protein Homology CDS 124807 125915 . + 0 ID=cds-LU631_RS00660;Parent=gene-LU631_RS00660;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS00660;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 126100 127623 . - . ID=gene-LU631_RS00665;Name=LU631_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00665;old_locus_tag=LU631_00665 NZ_CP089940.1 Protein Homology CDS 126100 127623 . - 0 ID=cds-WP_016191552.1;Parent=gene-LU631_RS00665;Dbxref=Genbank:WP_016191552.1;Name=WP_016191552.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015699327.1;locus_tag=LU631_RS00665;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_016191552.1;transl_table=11 NZ_CP089940.1 RefSeq gene 127970 128068 . + . ID=gene-LU631_RS00670;Name=LU631_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00670;old_locus_tag=LU631_00670 NZ_CP089940.1 Protein Homology CDS 127970 128068 . + 0 ID=cds-WP_152664223.1;Parent=gene-LU631_RS00670;Dbxref=Genbank:WP_152664223.1;Name=WP_152664223.1;Ontology_term=GO:0009082;gbkey=CDS;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=LU631_RS00670;product=IlvGEDA operon leader peptide;protein_id=WP_152664223.1;transl_table=11 NZ_CP089940.1 RefSeq gene 128209 129855 . + . ID=gene-LU631_RS00675;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=LU631_RS00675;old_locus_tag=LU631_00675 NZ_CP089940.1 Protein Homology CDS 128209 129855 . + 0 ID=cds-WP_016191551.1;Parent=gene-LU631_RS00675;Dbxref=Genbank:WP_016191551.1;Name=WP_016191551.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212017.1;locus_tag=LU631_RS00675;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_016191551.1;transl_table=11 NZ_CP089940.1 RefSeq gene 129852 130109 . + . ID=gene-LU631_RS00680;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=LU631_RS00680;old_locus_tag=LU631_00680 NZ_CP089940.1 Protein Homology CDS 129852 130109 . + 0 ID=cds-WP_016191550.1;Parent=gene-LU631_RS00680;Dbxref=Genbank:WP_016191550.1;Name=WP_016191550.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800629.1;locus_tag=LU631_RS00680;product=acetolactate synthase 2 small subunit;protein_id=WP_016191550.1;transl_table=11 NZ_CP089940.1 RefSeq gene 130128 131057 . + . ID=gene-LU631_RS00685;Name=LU631_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00685;old_locus_tag=LU631_00685 NZ_CP089940.1 Protein Homology CDS 130128 131057 . + 0 ID=cds-WP_016191549.1;Parent=gene-LU631_RS00685;Dbxref=Genbank:WP_016191549.1;Name=WP_016191549.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191549.1;locus_tag=LU631_RS00685;product=branched-chain amino acid transaminase;protein_id=WP_016191549.1;transl_table=11 NZ_CP089940.1 RefSeq gene 131116 132966 . + . ID=gene-LU631_RS00690;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=LU631_RS00690;old_locus_tag=LU631_00690 NZ_CP089940.1 Protein Homology CDS 131116 132966 . + 0 ID=cds-WP_016191548.1;Parent=gene-LU631_RS00690;Dbxref=Genbank:WP_016191548.1;Name=WP_016191548.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=LU631_RS00690;product=dihydroxy-acid dehydratase;protein_id=WP_016191548.1;transl_table=11 NZ_CP089940.1 RefSeq gene 132972 134531 . + . ID=gene-LU631_RS00695;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=LU631_RS00695;old_locus_tag=LU631_00695 NZ_CP089940.1 Protein Homology CDS 132972 134531 . + 0 ID=cds-WP_016191547.1;Parent=gene-LU631_RS00695;Dbxref=Genbank:WP_016191547.1;Name=WP_016191547.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585418.1;locus_tag=LU631_RS00695;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_016191547.1;transl_table=11 NZ_CP089940.1 RefSeq gene 134641 135522 . - . ID=gene-LU631_RS00700;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=LU631_RS00700;old_locus_tag=LU631_00700 NZ_CP089940.1 Protein Homology CDS 134641 135522 . - 0 ID=cds-WP_016191546.1;Parent=gene-LU631_RS00700;Dbxref=Genbank:WP_016191546.1;Name=WP_016191546.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080226.1;locus_tag=LU631_RS00700;product=HTH-type transcriptional activator IlvY;protein_id=WP_016191546.1;transl_table=11 NZ_CP089940.1 RefSeq gene 135688 137166 . + . ID=gene-LU631_RS00705;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=LU631_RS00705;old_locus_tag=LU631_00705 NZ_CP089940.1 Protein Homology CDS 135688 137166 . + 0 ID=cds-WP_016191545.1;Parent=gene-LU631_RS00705;Dbxref=Genbank:WP_016191545.1;Name=WP_016191545.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=LU631_RS00705;product=ketol-acid reductoisomerase;protein_id=WP_016191545.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 137356 137851 . + . ID=gene-LU631_RS00710;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS00710;old_locus_tag=LU631_00710;pseudo=true NZ_CP089940.1 Protein Homology CDS 137356 137851 . + 0 ID=cds-LU631_RS00710;Parent=gene-LU631_RS00710;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192470.1;locus_tag=LU631_RS00710;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 137888 138593 . + . ID=gene-LU631_RS00715;Name=LU631_RS00715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00715;old_locus_tag=LU631_00715;pseudo=true NZ_CP089940.1 Protein Homology CDS 137888 138593 . + 0 ID=cds-LU631_RS00715;Parent=gene-LU631_RS00715;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU631_RS00715;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 138641 139363 . - . ID=gene-LU631_RS00720;Name=LU631_RS00720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00720;old_locus_tag=LU631_00720;partial=true;pseudo=true;start_range=.,138641 NZ_CP089940.1 Protein Homology CDS 138641 139363 . - 0 ID=cds-LU631_RS00720;Parent=gene-LU631_RS00720;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000117208.1;locus_tag=LU631_RS00720;partial=true;product=ParB/RepB/Spo0J family partition protein;pseudo=true;start_range=.,138641;transl_table=11 NZ_CP089940.1 RefSeq gene 139704 140135 . - . ID=gene-LU631_RS25960;Name=LU631_RS25960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25960 NZ_CP089940.1 Protein Homology CDS 139704 140135 . - 0 ID=cds-WP_046372013.1-2;Parent=gene-LU631_RS25960;Dbxref=Genbank:WP_046372013.1;Name=WP_046372013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS25960;product=IS91 family transposase;protein_id=WP_046372013.1;transl_table=11 NZ_CP089940.1 RefSeq gene 140147 140917 . - . ID=gene-LU631_RS25965;Name=LU631_RS25965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25965 NZ_CP089940.1 Protein Homology CDS 140147 140917 . - 0 ID=cds-WP_267921497.1-2;Parent=gene-LU631_RS25965;Dbxref=Genbank:WP_267921497.1;Name=WP_267921497.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS25965;product=transposase zinc-binding domain-containing protein;protein_id=WP_267921497.1;transl_table=11 NZ_CP089940.1 RefSeq gene 140926 141066 . - . ID=gene-LU631_RS00730;Name=LU631_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00730;old_locus_tag=LU631_00730 NZ_CP089940.1 GeneMarkS-2+ CDS 140926 141066 . - 0 ID=cds-WP_161796965.1-3;Parent=gene-LU631_RS00730;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS00730;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 141621 143081 . + . ID=gene-LU631_RS00735;Name=LU631_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00735;old_locus_tag=LU631_00735 NZ_CP089940.1 Protein Homology CDS 141621 143081 . + 0 ID=cds-WP_016191542.1;Parent=gene-LU631_RS00735;Dbxref=Genbank:WP_016191542.1;Name=WP_016191542.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021508.2;locus_tag=LU631_RS00735;product=DUF2235 domain-containing protein;protein_id=WP_016191542.1;transl_table=11 NZ_CP089940.1 RefSeq gene 143490 144386 . - . ID=gene-LU631_RS00740;Name=LU631_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00740;old_locus_tag=LU631_00740 NZ_CP089940.1 Protein Homology CDS 143490 144386 . - 0 ID=cds-WP_016191541.1;Parent=gene-LU631_RS00740;Dbxref=Genbank:WP_016191541.1;Name=WP_016191541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000594647.1;locus_tag=LU631_RS00740;product=Bpu10I family restriction endonuclease;protein_id=WP_016191541.1;transl_table=11 NZ_CP089940.1 RefSeq gene 144379 145557 . - . ID=gene-LU631_RS00745;Name=LU631_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00745;old_locus_tag=LU631_00745 NZ_CP089940.1 Protein Homology CDS 144379 145557 . - 0 ID=cds-WP_016191540.1;Parent=gene-LU631_RS00745;Dbxref=Genbank:WP_016191540.1;Name=WP_016191540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000048865.1;locus_tag=LU631_RS00745;product=DNA cytosine methyltransferase;protein_id=WP_016191540.1;transl_table=11 NZ_CP089940.1 RefSeq gene 146017 148050 . + . ID=gene-LU631_RS00750;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=LU631_RS00750;old_locus_tag=LU631_00750 NZ_CP089940.1 Protein Homology CDS 146017 148050 . + 0 ID=cds-WP_046372330.1;Parent=gene-LU631_RS00750;Dbxref=Genbank:WP_046372330.1;Name=WP_046372330.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171315.1;locus_tag=LU631_RS00750;product=biofilm formation regulator HmsP;protein_id=WP_046372330.1;transl_table=11 NZ_CP089940.1 RefSeq gene 148273 149553 . + . ID=gene-LU631_RS00755;Name=LU631_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00755;old_locus_tag=LU631_00755 NZ_CP089940.1 Protein Homology CDS 148273 149553 . + 0 ID=cds-WP_016191538.1;Parent=gene-LU631_RS00755;Dbxref=Genbank:WP_016191538.1;Name=WP_016191538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008460613.1;locus_tag=LU631_RS00755;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_016191538.1;transl_table=11 NZ_CP089940.1 RefSeq gene 149791 151284 . + . ID=gene-LU631_RS00760;Name=LU631_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00760;old_locus_tag=LU631_00760 NZ_CP089940.1 Protein Homology CDS 149791 151284 . + 0 ID=cds-WP_016191537.1;Parent=gene-LU631_RS00760;Dbxref=Genbank:WP_016191537.1;Name=WP_016191537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204389.1;locus_tag=LU631_RS00760;product=pitrilysin family protein;protein_id=WP_016191537.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 151355 151960 . + . ID=gene-LU631_RS00765;Name=LU631_RS00765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00765;old_locus_tag=LU631_00765;partial=true;pseudo=true;start_range=.,151355 NZ_CP089940.1 Protein Homology CDS 151355 151960 . + 0 ID=cds-LU631_RS00765;Parent=gene-LU631_RS00765;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=LU631_RS00765;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,151355;transl_table=11 NZ_CP089940.1 RefSeq gene 152224 152997 . + . ID=gene-LU631_RS00770;Name=LU631_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00770;old_locus_tag=LU631_00770 NZ_CP089940.1 Protein Homology CDS 152224 152997 . + 0 ID=cds-WP_052734721.1;Parent=gene-LU631_RS00770;Dbxref=Genbank:WP_052734721.1;Name=WP_052734721.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020844.2;locus_tag=LU631_RS00770;product=hypothetical protein;protein_id=WP_052734721.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 153054 154377 . + . ID=gene-LU631_RS00775;Name=LU631_RS00775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00775;old_locus_tag=LU631_00775;pseudo=true NZ_CP089940.1 Protein Homology CDS 153054 154377 . + 0 ID=cds-LU631_RS00775;Parent=gene-LU631_RS00775;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS00775;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 154428 155276 . + . ID=gene-LU631_RS00780;Name=LU631_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00780;old_locus_tag=LU631_00780 NZ_CP089940.1 Protein Homology CDS 154428 155276 . + 0 ID=cds-WP_016191533.1;Parent=gene-LU631_RS00780;Dbxref=Genbank:WP_016191533.1;Name=WP_016191533.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026034.2;locus_tag=LU631_RS00780;product=polysaccharide lyase family protein;protein_id=WP_016191533.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 155460 155651 . - . ID=gene-LU631_RS00785;Name=LU631_RS00785;end_range=155651,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00785;old_locus_tag=LU631_00785;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 155460 155651 . - 0 ID=cds-LU631_RS00785;Parent=gene-LU631_RS00785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=155651,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000766597.1;locus_tag=LU631_RS00785;partial=true;product=ISKra4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 155685 156150 . - . ID=gene-LU631_RS00790;Name=LU631_RS00790;end_range=156150,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00790;old_locus_tag=LU631_00790;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 155685 156150 . - 0 ID=cds-LU631_RS00790;Parent=gene-LU631_RS00790;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=156150,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611683.1;locus_tag=LU631_RS00790;partial=true;product=Tn3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 156516 157441 . - . ID=gene-LU631_RS00795;Name=LU631_RS00795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00795;old_locus_tag=LU631_00795;pseudo=true NZ_CP089940.1 Protein Homology CDS 156516 157441 . - 0 ID=cds-LU631_RS00795;Parent=gene-LU631_RS00795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009351674.1;locus_tag=LU631_RS00795;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 157398 158182 . - . ID=gene-LU631_RS00800;Name=LU631_RS00800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00800;old_locus_tag=LU631_00800;partial=true;pseudo=true;start_range=.,157398 NZ_CP089940.1 Protein Homology CDS 157398 158182 . - 0 ID=cds-LU631_RS00800;Parent=gene-LU631_RS00800;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611902.1;locus_tag=LU631_RS00800;partial=true;product=ISNCY family transposase;pseudo=true;start_range=.,157398;transl_table=11 NZ_CP089940.1 RefSeq gene 158691 159503 . - . ID=gene-LU631_RS00805;Name=LU631_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00805;old_locus_tag=LU631_00805 NZ_CP089940.1 Protein Homology CDS 158691 159503 . - 0 ID=cds-WP_016191525.1;Parent=gene-LU631_RS00805;Dbxref=Genbank:WP_016191525.1;Name=WP_016191525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673659.1;locus_tag=LU631_RS00805;product=DUF4225 domain-containing protein;protein_id=WP_016191525.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 159689 160005 . + . ID=gene-LU631_RS00810;Name=LU631_RS00810;end_range=160005,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00810;old_locus_tag=LU631_00810;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 159689 160005 . + 0 ID=cds-LU631_RS00810;Parent=gene-LU631_RS00810;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=160005,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=LU631_RS00810;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 160160 161092 . - . ID=gene-LU631_RS00815;Name=LU631_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00815;old_locus_tag=LU631_00815 NZ_CP089940.1 Protein Homology CDS 160160 161092 . - 0 ID=cds-WP_016191523.1;Parent=gene-LU631_RS00815;Dbxref=Genbank:WP_016191523.1;Name=WP_016191523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315827.1;locus_tag=LU631_RS00815;product=sugar kinase;protein_id=WP_016191523.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 161367 163382 . + . ID=gene-LU631_RS00820;Name=LU631_RS00820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00820;old_locus_tag=LU631_00820;pseudo=true NZ_CP089940.1 Protein Homology CDS 161367 163382 . + 0 ID=cds-LU631_RS00820;Parent=gene-LU631_RS00820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001231893.1;locus_tag=LU631_RS00820;product=AsmA family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 163862 164593 . - . ID=gene-LU631_RS00825;Name=LU631_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00825;old_locus_tag=LU631_00825 NZ_CP089940.1 GeneMarkS-2+ CDS 163862 164593 . - 0 ID=cds-WP_016191521.1;Parent=gene-LU631_RS00825;Dbxref=Genbank:WP_016191521.1;Name=WP_016191521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS00825;product=hypothetical protein;protein_id=WP_016191521.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 164726 165212 . - . ID=gene-LU631_RS00830;Name=LU631_RS00830;end_range=165212,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00830;old_locus_tag=LU631_00830;partial=true;pseudo=true;start_range=.,164726 NZ_CP089940.1 Protein Homology CDS 164726 165212 . - 0 ID=cds-LU631_RS00830;Parent=gene-LU631_RS00830;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=165212,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS00830;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,164726;transl_table=11 NZ_CP089940.1 RefSeq gene 165395 166609 . - . ID=gene-LU631_RS00835;Name=LU631_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00835;old_locus_tag=LU631_00835 NZ_CP089940.1 Protein Homology CDS 165395 166609 . - 0 ID=cds-WP_046371879.1-3;Parent=gene-LU631_RS00835;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS00835;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 166618 166758 . - . ID=gene-LU631_RS00840;Name=LU631_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00840;old_locus_tag=LU631_00840 NZ_CP089940.1 GeneMarkS-2+ CDS 166618 166758 . - 0 ID=cds-WP_161796965.1-4;Parent=gene-LU631_RS00840;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS00840;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 167320 168519 . - . ID=gene-LU631_RS00845;Name=LU631_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00845;old_locus_tag=LU631_00845 NZ_CP089940.1 Protein Homology CDS 167320 168519 . - 0 ID=cds-WP_046372110.1-2;Parent=gene-LU631_RS00845;Dbxref=Genbank:WP_046372110.1;Name=WP_046372110.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU631_RS00845;product=IS91 family transposase;protein_id=WP_046372110.1;transl_table=11 NZ_CP089940.1 RefSeq gene 168528 168716 . - . ID=gene-LU631_RS00850;Name=LU631_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00850;old_locus_tag=LU631_00850 NZ_CP089940.1 Protein Homology CDS 168528 168716 . - 0 ID=cds-WP_020322936.1-3;Parent=gene-LU631_RS00850;Dbxref=Genbank:WP_020322936.1;Name=WP_020322936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192885.1;locus_tag=LU631_RS00850;product=hypothetical protein;protein_id=WP_020322936.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 168832 169095 . - . ID=gene-LU631_RS00855;Name=LU631_RS00855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS00855;old_locus_tag=LU631_00855;partial=true;pseudo=true;start_range=.,168832 NZ_CP089940.1 Protein Homology CDS 168832 169095 . - 0 ID=cds-LU631_RS00855;Parent=gene-LU631_RS00855;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS00855;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,168832;transl_table=11 NZ_CP089940.1 RefSeq gene 169217 169639 . - . ID=gene-LU631_RS00860;Name=LU631_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00860;old_locus_tag=LU631_00860 NZ_CP089940.1 GeneMarkS-2+ CDS 169217 169639 . - 0 ID=cds-WP_016191517.1;Parent=gene-LU631_RS00860;Dbxref=Genbank:WP_016191517.1;Name=WP_016191517.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS00860;product=hypothetical protein;protein_id=WP_016191517.1;transl_table=11 NZ_CP089940.1 RefSeq gene 169620 170330 . - . ID=gene-LU631_RS00865;Name=LU631_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00865;old_locus_tag=LU631_00865 NZ_CP089940.1 Protein Homology CDS 169620 170330 . - 0 ID=cds-WP_046372121.1;Parent=gene-LU631_RS00865;Dbxref=Genbank:WP_046372121.1;Name=WP_046372121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122194.1;locus_tag=LU631_RS00865;product=hypothetical protein;protein_id=WP_046372121.1;transl_table=11 NZ_CP089940.1 RefSeq gene 170317 170871 . - . ID=gene-LU631_RS00870;Name=LU631_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00870;old_locus_tag=LU631_00870 NZ_CP089940.1 Protein Homology CDS 170317 170871 . - 0 ID=cds-WP_016191515.1;Parent=gene-LU631_RS00870;Dbxref=Genbank:WP_016191515.1;Name=WP_016191515.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021031.2;locus_tag=LU631_RS00870;product=type III secretion system protein;protein_id=WP_016191515.1;transl_table=11 NZ_CP089940.1 RefSeq gene 170868 171638 . - . ID=gene-LU631_RS00875;Name=sctJ;gbkey=Gene;gene=sctJ;gene_biotype=protein_coding;locus_tag=LU631_RS00875;old_locus_tag=LU631_00875 NZ_CP089940.1 Protein Homology CDS 170868 171638 . - 0 ID=cds-WP_016191514.1;Parent=gene-LU631_RS00875;Dbxref=Genbank:WP_016191514.1;Name=WP_016191514.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctJ;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155855.1;locus_tag=LU631_RS00875;product=type III secretion inner membrane ring lipoprotein SctJ;protein_id=WP_016191514.1;transl_table=11 NZ_CP089940.1 RefSeq gene 171638 171961 . - . ID=gene-LU631_RS00880;Name=sctI;gbkey=Gene;gene=sctI;gene_biotype=protein_coding;locus_tag=LU631_RS00880;old_locus_tag=LU631_00880 NZ_CP089940.1 Protein Homology CDS 171638 171961 . - 0 ID=cds-WP_016191513.1;Parent=gene-LU631_RS00880;Dbxref=Genbank:WP_016191513.1;Name=WP_016191513.1;gbkey=CDS;gene=sctI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157270.1;locus_tag=LU631_RS00880;product=type III secretion system inner rod subunit SctI;protein_id=WP_016191513.1;transl_table=11 NZ_CP089940.1 RefSeq gene 172016 172288 . - . ID=gene-LU631_RS00885;Name=sctF;gbkey=Gene;gene=sctF;gene_biotype=protein_coding;locus_tag=LU631_RS00885;old_locus_tag=LU631_00885 NZ_CP089940.1 Protein Homology CDS 172016 172288 . - 0 ID=cds-WP_016191512.1;Parent=gene-LU631_RS00885;Dbxref=Genbank:WP_016191512.1;Name=WP_016191512.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctF;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155857.1;locus_tag=LU631_RS00885;product=type III secretion system needle filament subunit SctF;protein_id=WP_016191512.1;transl_table=11 NZ_CP089940.1 RefSeq gene 172292 173545 . - . ID=gene-LU631_RS00890;Name=LU631_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00890;old_locus_tag=LU631_00890 NZ_CP089940.1 Protein Homology CDS 172292 173545 . - 0 ID=cds-WP_016191511.1;Parent=gene-LU631_RS00890;Dbxref=Genbank:WP_016191511.1;Name=WP_016191511.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168754.1;locus_tag=LU631_RS00890;product=PrgH/EprH family type III secretion apparatus protein;protein_id=WP_016191511.1;transl_table=11 NZ_CP089940.1 RefSeq gene 173835 174713 . + . ID=gene-LU631_RS00895;Name=LU631_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00895;old_locus_tag=LU631_00895 NZ_CP089940.1 Protein Homology CDS 173835 174713 . + 0 ID=cds-WP_016191510.1;Parent=gene-LU631_RS00895;Dbxref=Genbank:WP_016191510.1;Name=WP_016191510.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=LU631_RS00895;product=helix-turn-helix domain-containing protein;protein_id=WP_016191510.1;transl_table=11 NZ_CP089940.1 RefSeq gene 174706 176478 . + . ID=gene-LU631_RS00900;Name=sctC;gbkey=Gene;gene=sctC;gene_biotype=protein_coding;locus_tag=LU631_RS00900;old_locus_tag=LU631_00900 NZ_CP089940.1 Protein Homology CDS 174706 176478 . + 0 ID=cds-WP_016191509.1;Parent=gene-LU631_RS00900;Dbxref=Genbank:WP_016191509.1;Name=WP_016191509.1;gbkey=CDS;gene=sctC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820287.1;locus_tag=LU631_RS00900;product=type III secretion system outer membrane ring subunit SctC;protein_id=WP_016191509.1;transl_table=11 NZ_CP089940.1 RefSeq gene 176485 177606 . + . ID=gene-LU631_RS00905;Name=sctW;gbkey=Gene;gene=sctW;gene_biotype=protein_coding;locus_tag=LU631_RS00905;old_locus_tag=LU631_00905 NZ_CP089940.1 Protein Homology CDS 176485 177606 . + 0 ID=cds-WP_016191508.1;Parent=gene-LU631_RS00905;Dbxref=Genbank:WP_016191508.1;Name=WP_016191508.1;Ontology_term=GO:0030254,GO:0050709,GO:0009986;gbkey=CDS;gene=sctW;go_component=cell surface|0009986||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA,negative regulation of protein secretion|0050709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155871.1;locus_tag=LU631_RS00905;product=type III secretion system gatekeeper subunit SctW;protein_id=WP_016191508.1;transl_table=11 NZ_CP089940.1 RefSeq gene 177637 179691 . + . ID=gene-LU631_RS00910;Name=LU631_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00910;old_locus_tag=LU631_00910 NZ_CP089940.1 Protein Homology CDS 177637 179691 . + 0 ID=cds-WP_016191507.1;Parent=gene-LU631_RS00910;Dbxref=Genbank:WP_016191507.1;Name=WP_016191507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820285.1;locus_tag=LU631_RS00910;product=EscV/YscV/HrcV family type III secretion system export apparatus protein;protein_id=WP_016191507.1;transl_table=11 NZ_CP089940.1 RefSeq gene 179701 180108 . + . ID=gene-LU631_RS00915;Name=LU631_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00915;old_locus_tag=LU631_00915 NZ_CP089940.1 Protein Homology CDS 179701 180108 . + 0 ID=cds-WP_016191506.1;Parent=gene-LU631_RS00915;Dbxref=Genbank:WP_016191506.1;Name=WP_016191506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155875.1;locus_tag=LU631_RS00915;product=type III secretion system protein;protein_id=WP_016191506.1;transl_table=11 NZ_CP089940.1 RefSeq gene 180127 181422 . + . ID=gene-LU631_RS00920;Name=sctN;gbkey=Gene;gene=sctN;gene_biotype=protein_coding;locus_tag=LU631_RS00920;old_locus_tag=LU631_00920 NZ_CP089940.1 Protein Homology CDS 180127 181422 . + 0 ID=cds-WP_046372122.1;Parent=gene-LU631_RS00920;Dbxref=Genbank:WP_046372122.1;Name=WP_046372122.1;gbkey=CDS;gene=sctN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169605.1;locus_tag=LU631_RS00920;product=type III secretion system ATPase SctN;protein_id=WP_046372122.1;transl_table=11 NZ_CP089940.1 RefSeq gene 181406 181867 . + . ID=gene-LU631_RS00925;Name=LU631_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00925;old_locus_tag=LU631_00925 NZ_CP089940.1 GeneMarkS-2+ CDS 181406 181867 . + 0 ID=cds-WP_016191504.1;Parent=gene-LU631_RS00925;Dbxref=Genbank:WP_016191504.1;Name=WP_016191504.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS00925;product=hypothetical protein;protein_id=WP_016191504.1;transl_table=11 NZ_CP089940.1 RefSeq gene 181848 182756 . + . ID=gene-LU631_RS00930;Name=LU631_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00930;old_locus_tag=LU631_00930 NZ_CP089940.1 Protein Homology CDS 181848 182756 . + 0 ID=cds-WP_016191503.1;Parent=gene-LU631_RS00930;Dbxref=Genbank:WP_016191503.1;Name=WP_016191503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544129.1;locus_tag=LU631_RS00930;product=hypothetical protein;protein_id=WP_016191503.1;transl_table=11 NZ_CP089940.1 RefSeq gene 182753 183679 . + . ID=gene-LU631_RS00935;Name=LU631_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00935;old_locus_tag=LU631_00935 NZ_CP089940.1 Protein Homology CDS 182753 183679 . + 0 ID=cds-WP_016191502.1;Parent=gene-LU631_RS00935;Dbxref=Genbank:WP_016191502.1;Name=WP_016191502.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013236.2;locus_tag=LU631_RS00935;product=FliM/FliN family flagellar motor switch protein;protein_id=WP_016191502.1;transl_table=11 NZ_CP089940.1 RefSeq gene 183669 184340 . + . ID=gene-LU631_RS00940;Name=LU631_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00940;old_locus_tag=LU631_00940 NZ_CP089940.1 Protein Homology CDS 183669 184340 . + 0 ID=cds-WP_016191501.1;Parent=gene-LU631_RS00940;Dbxref=Genbank:WP_016191501.1;Name=WP_016191501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950425.1;locus_tag=LU631_RS00940;product=EscR/YscR/HrcR family type III secretion system export apparatus protein;protein_id=WP_016191501.1;transl_table=11 NZ_CP089940.1 RefSeq gene 184337 184591 . + . ID=gene-LU631_RS00945;Name=sctS;gbkey=Gene;gene=sctS;gene_biotype=protein_coding;locus_tag=LU631_RS00945;old_locus_tag=LU631_00945 NZ_CP089940.1 Protein Homology CDS 184337 184591 . + 0 ID=cds-WP_016191500.1;Parent=gene-LU631_RS00945;Dbxref=Genbank:WP_016191500.1;Name=WP_016191500.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155885.1;locus_tag=LU631_RS00945;product=type III secretion system export apparatus subunit SctS;protein_id=WP_016191500.1;transl_table=11 NZ_CP089940.1 RefSeq gene 184604 185368 . + . ID=gene-LU631_RS00950;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=LU631_RS00950;old_locus_tag=LU631_00950 NZ_CP089940.1 Protein Homology CDS 184604 185368 . + 0 ID=cds-WP_016191499.1;Parent=gene-LU631_RS00950;Dbxref=Genbank:WP_016191499.1;Name=WP_016191499.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctT;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168769.1;locus_tag=LU631_RS00950;product=type III secretion system export apparatus subunit SctT;protein_id=WP_016191499.1;transl_table=11 NZ_CP089940.1 RefSeq gene 185378 186469 . + . ID=gene-LU631_RS00955;Name=LU631_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00955;old_locus_tag=LU631_00955 NZ_CP089940.1 Protein Homology CDS 185378 186469 . + 0 ID=cds-WP_016191498.1;Parent=gene-LU631_RS00955;Dbxref=Genbank:WP_016191498.1;Name=WP_016191498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668284.1;locus_tag=LU631_RS00955;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;protein_id=WP_016191498.1;transl_table=11 NZ_CP089940.1 RefSeq gene 186604 187140 . + . ID=gene-LU631_RS00960;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=LU631_RS00960;old_locus_tag=LU631_00960 NZ_CP089940.1 Protein Homology CDS 186604 187140 . + 0 ID=cds-WP_016191497.1;Parent=gene-LU631_RS00960;Dbxref=Genbank:WP_016191497.1;Name=WP_016191497.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442390.1;locus_tag=LU631_RS00960;product=type III secretion system translocator chaperone SicA;protein_id=WP_016191497.1;transl_table=11 NZ_CP089940.1 RefSeq gene 187155 189026 . + . ID=gene-LU631_RS00965;Name=sctE;gbkey=Gene;gene=sctE;gene_biotype=protein_coding;locus_tag=LU631_RS00965;old_locus_tag=LU631_00965 NZ_CP089940.1 Protein Homology CDS 187155 189026 . + 0 ID=cds-WP_016191496.1;Parent=gene-LU631_RS00965;Dbxref=Genbank:WP_016191496.1;Name=WP_016191496.1;gbkey=CDS;gene=sctE;inference=COORDINATES: protein motif:HMM:NF016759.2;locus_tag=LU631_RS00965;product=type III secretion system translocon subunit SctE;protein_id=WP_016191496.1;transl_table=11 NZ_CP089940.1 RefSeq gene 189061 190266 . + . ID=gene-LU631_RS00970;Name=LU631_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00970;old_locus_tag=LU631_00970 NZ_CP089940.1 GeneMarkS-2+ CDS 189061 190266 . + 0 ID=cds-WP_016191495.1;Parent=gene-LU631_RS00970;Dbxref=Genbank:WP_016191495.1;Name=WP_016191495.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS00970;product=hypothetical protein;protein_id=WP_016191495.1;transl_table=11 NZ_CP089940.1 RefSeq gene 190337 191515 . + . ID=gene-LU631_RS00975;Name=LU631_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00975;old_locus_tag=LU631_00975 NZ_CP089940.1 Protein Homology CDS 190337 191515 . + 0 ID=cds-WP_016191494.1;Parent=gene-LU631_RS00975;Dbxref=Genbank:WP_016191494.1;Name=WP_016191494.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018244.2;locus_tag=LU631_RS00975;product=IpaD/SipD/SspD family type III secretion system needle tip protein;protein_id=WP_016191494.1;transl_table=11 NZ_CP089940.1 RefSeq gene 191714 194947 . + . ID=gene-LU631_RS00980;Name=LU631_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00980;old_locus_tag=LU631_00980 NZ_CP089940.1 GeneMarkS-2+ CDS 191714 194947 . + 0 ID=cds-WP_016191493.1;Parent=gene-LU631_RS00980;Dbxref=Genbank:WP_016191493.1;Name=WP_016191493.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS00980;product=hypothetical protein;protein_id=WP_016191493.1;transl_table=11 NZ_CP089940.1 RefSeq gene 195006 195275 . + . ID=gene-LU631_RS00985;Name=LU631_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00985;old_locus_tag=LU631_00985 NZ_CP089940.1 Protein Homology CDS 195006 195275 . + 0 ID=cds-WP_016191492.1;Parent=gene-LU631_RS00985;Dbxref=Genbank:WP_016191492.1;Name=WP_016191492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157295.1;locus_tag=LU631_RS00985;product=acyl carrier protein;protein_id=WP_016191492.1;transl_table=11 NZ_CP089940.1 RefSeq gene 195508 196548 . - . ID=gene-LU631_RS00990;Name=LU631_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00990;old_locus_tag=LU631_00990 NZ_CP089940.1 Protein Homology CDS 195508 196548 . - 0 ID=cds-WP_046372123.1;Parent=gene-LU631_RS00990;Dbxref=Genbank:WP_046372123.1;Name=WP_046372123.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS00990;product=IS481 family transposase;protein_id=WP_046372123.1;transl_table=11 NZ_CP089940.1 RefSeq gene 196863 197414 . + . ID=gene-LU631_RS00995;Name=LU631_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS00995;old_locus_tag=LU631_00995 NZ_CP089940.1 Protein Homology CDS 196863 197414 . + 0 ID=cds-WP_016191491.1;Parent=gene-LU631_RS00995;Dbxref=Genbank:WP_016191491.1;Name=WP_016191491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669100.1;locus_tag=LU631_RS00995;product=DUF1440 domain-containing protein;protein_id=WP_016191491.1;transl_table=11 NZ_CP089940.1 RefSeq gene 197455 198777 . - . ID=gene-LU631_RS01000;Name=LU631_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01000;old_locus_tag=LU631_01000 NZ_CP089940.1 Protein Homology CDS 197455 198777 . - 0 ID=cds-WP_046371900.1;Parent=gene-LU631_RS01000;Dbxref=Genbank:WP_046371900.1;Name=WP_046371900.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS01000;product=IS4 family transposase;protein_id=WP_046371900.1;transl_table=11 NZ_CP089940.1 RefSeq gene 199026 200354 . - . ID=gene-LU631_RS01005;Name=LU631_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01005;old_locus_tag=LU631_01005 NZ_CP089940.1 Protein Homology CDS 199026 200354 . - 0 ID=cds-WP_016191490.1;Parent=gene-LU631_RS01005;Dbxref=Genbank:WP_016191490.1;Name=WP_016191490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443050.1;locus_tag=LU631_RS01005;product=MFS transporter;protein_id=WP_016191490.1;transl_table=11 NZ_CP089940.1 RefSeq gene 200561 200716 . - . ID=gene-LU631_RS01010;Name=LU631_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01010;old_locus_tag=LU631_01010 NZ_CP089940.1 GeneMarkS-2+ CDS 200561 200716 . - 0 ID=cds-WP_157275238.1;Parent=gene-LU631_RS01010;Dbxref=Genbank:WP_157275238.1;Name=WP_157275238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS01010;product=hypothetical protein;protein_id=WP_157275238.1;transl_table=11 NZ_CP089940.1 RefSeq gene 200810 201055 . + . ID=gene-LU631_RS01015;Name=LU631_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01015;old_locus_tag=LU631_01015 NZ_CP089940.1 GeneMarkS-2+ CDS 200810 201055 . + 0 ID=cds-WP_016191489.1;Parent=gene-LU631_RS01015;Dbxref=Genbank:WP_016191489.1;Name=WP_016191489.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS01015;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_016191489.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 201106 201261 . - . ID=gene-LU631_RS01020;Name=LU631_RS01020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01020;old_locus_tag=LU631_01020;partial=true;pseudo=true;start_range=.,201106 NZ_CP089940.1 Protein Homology CDS 201106 201261 . - 0 ID=cds-LU631_RS01020;Parent=gene-LU631_RS01020;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000905001.1;locus_tag=LU631_RS01020;partial=true;product=recombinase family protein;pseudo=true;start_range=.,201106;transl_table=11 NZ_CP089940.1 RefSeq gene 201390 201632 . - . ID=gene-LU631_RS01025;Name=LU631_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01025;old_locus_tag=LU631_01025 NZ_CP089940.1 Protein Homology CDS 201390 201632 . - 0 ID=cds-WP_016191487.1;Parent=gene-LU631_RS01025;Dbxref=Genbank:WP_016191487.1;Name=WP_016191487.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=LU631_RS01025;product=SDR family oxidoreductase;protein_id=WP_016191487.1;transl_table=11 NZ_CP089940.1 RefSeq gene 202452 203012 . + . ID=gene-LU631_RS01030;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=LU631_RS01030;old_locus_tag=LU631_01030 NZ_CP089940.1 Protein Homology CDS 202452 203012 . + 0 ID=cds-WP_016191485.1;Parent=gene-LU631_RS01030;Dbxref=Genbank:WP_016191485.1;Name=WP_016191485.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161038.1;locus_tag=LU631_RS01030;product=manganese efflux pump MntP;protein_id=WP_016191485.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 203503 204234 . + . ID=gene-LU631_RS01035;Name=LU631_RS01035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01035;old_locus_tag=LU631_01035;pseudo=true NZ_CP089940.1 Protein Homology CDS 203503 204234 . + 0 ID=cds-LU631_RS01035;Parent=gene-LU631_RS01035;Note=internal stop;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083096.1;locus_tag=LU631_RS01035;product=glucose 1-dehydrogenase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 204347 205282 . + . ID=gene-LU631_RS01040;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=pseudogene;locus_tag=LU631_RS01040;old_locus_tag=LU631_01040;pseudo=true NZ_CP089940.1 Protein Homology CDS 204347 205282 . + 0 ID=cds-LU631_RS01040;Parent=gene-LU631_RS01040;Note=frameshifted;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006709009.1;locus_tag=LU631_RS01040;product=curved DNA-binding protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 205279 205434 . + . ID=gene-LU631_RS01045;Name=LU631_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01045;old_locus_tag=LU631_01045 NZ_CP089940.1 GeneMarkS-2+ CDS 205279 205434 . + 0 ID=cds-WP_016191480.1;Parent=gene-LU631_RS01045;Dbxref=Genbank:WP_016191480.1;Name=WP_016191480.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS01045;product=hypothetical protein;protein_id=WP_016191480.1;transl_table=11 NZ_CP089940.1 RefSeq gene 205606 205941 . - . ID=gene-LU631_RS01050;Name=LU631_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01050;old_locus_tag=LU631_01050 NZ_CP089940.1 GeneMarkS-2+ CDS 205606 205941 . - 0 ID=cds-WP_016191478.1;Parent=gene-LU631_RS01050;Dbxref=Genbank:WP_016191478.1;Name=WP_016191478.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS01050;product=hypothetical protein;protein_id=WP_016191478.1;transl_table=11 NZ_CP089940.1 RefSeq gene 206244 206696 . - . ID=gene-LU631_RS01055;Name=LU631_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01055;old_locus_tag=LU631_01055 NZ_CP089940.1 Protein Homology CDS 206244 206696 . - 0 ID=cds-WP_016191477.1;Parent=gene-LU631_RS01055;Dbxref=Genbank:WP_016191477.1;Name=WP_016191477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204373.1;locus_tag=LU631_RS01055;product=SgcJ/EcaC family oxidoreductase;protein_id=WP_016191477.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 206857 207080 . + . ID=gene-LU631_RS01060;Name=LU631_RS01060;end_range=207080,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01060;old_locus_tag=LU631_01060;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 206857 207080 . + 0 ID=cds-LU631_RS01060;Parent=gene-LU631_RS01060;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=207080,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011787828.1;locus_tag=LU631_RS01060;partial=true;product=helix-turn-helix domain containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 207185 208225 . + . ID=gene-LU631_RS01065;Name=LU631_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01065;old_locus_tag=LU631_01065 NZ_CP089940.1 Protein Homology CDS 207185 208225 . + 0 ID=cds-WP_046371791.1;Parent=gene-LU631_RS01065;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS01065;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 208260 209036 . - . ID=gene-LU631_RS01070;Name=LU631_RS01070;end_range=209036,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01070;old_locus_tag=LU631_01070;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 208260 209036 . - 0 ID=cds-LU631_RS01070;Parent=gene-LU631_RS01070;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=209036,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=LU631_RS01070;partial=true;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 209097 210137 . - . ID=gene-LU631_RS01075;Name=LU631_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01075;old_locus_tag=LU631_01075 NZ_CP089940.1 Protein Homology CDS 209097 210137 . - 0 ID=cds-WP_046372125.1;Parent=gene-LU631_RS01075;Dbxref=Genbank:WP_046372125.1;Name=WP_046372125.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS01075;product=IS481 family transposase;protein_id=WP_046372125.1;transl_table=11 NZ_CP089940.1 RefSeq gene 210768 211409 . - . ID=gene-LU631_RS01080;Name=LU631_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01080;old_locus_tag=LU631_01080 NZ_CP089940.1 Protein Homology CDS 210768 211409 . - 0 ID=cds-WP_016191474.1;Parent=gene-LU631_RS01080;Dbxref=Genbank:WP_016191474.1;Name=WP_016191474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004960963.1;locus_tag=LU631_RS01080;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_016191474.1;transl_table=11 NZ_CP089940.1 RefSeq gene 211452 212213 . - . ID=gene-LU631_RS01085;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=LU631_RS01085;old_locus_tag=LU631_01085 NZ_CP089940.1 Protein Homology CDS 211452 212213 . - 0 ID=cds-WP_016191473.1;Parent=gene-LU631_RS01085;Dbxref=Genbank:WP_016191473.1;Name=WP_016191473.1;Ontology_term=GO:0000272,GO:0008678,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=2-deoxy-D-gluconate 3-dehydrogenase activity|0008678||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434532.1;locus_tag=LU631_RS01085;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_016191473.1;transl_table=11 NZ_CP089940.1 RefSeq gene 212227 213366 . - . ID=gene-LU631_RS01090;Name=LU631_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01090;old_locus_tag=LU631_01090 NZ_CP089940.1 Protein Homology CDS 212227 213366 . - 0 ID=cds-WP_016191472.1;Parent=gene-LU631_RS01090;Dbxref=Genbank:WP_016191472.1;Name=WP_016191472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814237.1;locus_tag=LU631_RS01090;product=glycoside hydrolase family 88 protein;protein_id=WP_016191472.1;transl_table=11 NZ_CP089940.1 RefSeq gene 213389 214993 . - . ID=gene-LU631_RS01095;Name=LU631_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01095;old_locus_tag=LU631_01095 NZ_CP089940.1 Protein Homology CDS 213389 214993 . - 0 ID=cds-WP_046372126.1;Parent=gene-LU631_RS01095;Dbxref=Genbank:WP_046372126.1;Name=WP_046372126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768577.1;locus_tag=LU631_RS01095;product=MFS transporter;protein_id=WP_046372126.1;transl_table=11 NZ_CP089940.1 RefSeq gene 215317 216330 . + . ID=gene-LU631_RS01100;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=LU631_RS01100;old_locus_tag=LU631_01100 NZ_CP089940.1 Protein Homology CDS 215317 216330 . + 0 ID=cds-WP_016191471.1;Parent=gene-LU631_RS01100;Dbxref=Genbank:WP_016191471.1;Name=WP_016191471.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015697863.1;locus_tag=LU631_RS01100;product=alcohol dehydrogenase AdhP;protein_id=WP_016191471.1;transl_table=11 NZ_CP089940.1 RefSeq gene 216694 216924 . - . ID=gene-LU631_RS01105;Name=LU631_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01105;old_locus_tag=LU631_01105 NZ_CP089940.1 GeneMarkS-2+ CDS 216694 216924 . - 0 ID=cds-WP_233481972.1;Parent=gene-LU631_RS01105;Dbxref=Genbank:WP_233481972.1;Name=WP_233481972.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS01105;product=hypothetical protein;protein_id=WP_233481972.1;transl_table=11 NZ_CP089940.1 RefSeq gene 217943 218581 . + . ID=gene-LU631_RS01110;Name=LU631_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01110;old_locus_tag=LU631_01110 NZ_CP089940.1 Protein Homology CDS 217943 218581 . + 0 ID=cds-WP_016191469.1;Parent=gene-LU631_RS01110;Dbxref=Genbank:WP_016191469.1;Name=WP_016191469.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.2;locus_tag=LU631_RS01110;product=LuxR family transcriptional regulator;protein_id=WP_016191469.1;transl_table=11 NZ_CP089940.1 RefSeq gene 218646 219137 . - . ID=gene-LU631_RS01115;Name=LU631_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01115;old_locus_tag=LU631_01115 NZ_CP089940.1 Protein Homology CDS 218646 219137 . - 0 ID=cds-WP_016191468.1;Parent=gene-LU631_RS01115;Dbxref=Genbank:WP_016191468.1;Name=WP_016191468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178513.1;locus_tag=LU631_RS01115;product=DcrB-related protein;protein_id=WP_016191468.1;transl_table=11 NZ_CP089940.1 RefSeq gene 219147 220631 . - . ID=gene-LU631_RS01120;Name=LU631_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01120;old_locus_tag=LU631_01120 NZ_CP089940.1 Protein Homology CDS 219147 220631 . - 0 ID=cds-WP_016191467.1;Parent=gene-LU631_RS01120;Dbxref=Genbank:WP_016191467.1;Name=WP_016191467.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012894.2;locus_tag=LU631_RS01120;product=OmpA family protein;protein_id=WP_016191467.1;transl_table=11 NZ_CP089940.1 RefSeq gene 220631 221242 . - . ID=gene-LU631_RS01125;Name=LU631_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01125;old_locus_tag=LU631_01125 NZ_CP089940.1 GeneMarkS-2+ CDS 220631 221242 . - 0 ID=cds-WP_040465603.1;Parent=gene-LU631_RS01125;Dbxref=Genbank:WP_040465603.1;Name=WP_040465603.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS01125;product=DotU family type IV/VI secretion system protein;protein_id=WP_040465603.1;transl_table=11 NZ_CP089940.1 RefSeq gene 221236 222576 . - . ID=gene-LU631_RS01130;Name=LU631_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01130;old_locus_tag=LU631_01130 NZ_CP089940.1 Protein Homology CDS 221236 222576 . - 0 ID=cds-WP_152664227.1;Parent=gene-LU631_RS01130;Dbxref=Genbank:WP_152664227.1;Name=WP_152664227.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022839.2;locus_tag=LU631_RS01130;product=glycosyltransferase;protein_id=WP_152664227.1;transl_table=11 NZ_CP089940.1 RefSeq gene 222599 223600 . - . ID=gene-LU631_RS01135;Name=LU631_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01135;old_locus_tag=LU631_01135 NZ_CP089940.1 Protein Homology CDS 222599 223600 . - 0 ID=cds-WP_040465602.1;Parent=gene-LU631_RS01135;Dbxref=Genbank:WP_040465602.1;Name=WP_040465602.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.2;locus_tag=LU631_RS01135;product=fimbrial protein;protein_id=WP_040465602.1;transl_table=11 NZ_CP089940.1 RefSeq gene 223606 224667 . - . ID=gene-LU631_RS01140;Name=LU631_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01140;old_locus_tag=LU631_01140 NZ_CP089940.1 Protein Homology CDS 223606 224667 . - 0 ID=cds-WP_016191463.1;Parent=gene-LU631_RS01140;Dbxref=Genbank:WP_016191463.1;Name=WP_016191463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713769.1;locus_tag=LU631_RS01140;product=type VI secretion system ImpA family N-terminal domain-containing protein;protein_id=WP_016191463.1;transl_table=11 NZ_CP089940.1 RefSeq gene 224745 225770 . - . ID=gene-LU631_RS01145;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LU631_RS01145;old_locus_tag=LU631_01145 NZ_CP089940.1 Protein Homology CDS 224745 225770 . - 0 ID=cds-WP_016191462.1;Parent=gene-LU631_RS01145;Dbxref=Genbank:WP_016191462.1;Name=WP_016191462.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008454357.1;locus_tag=LU631_RS01145;product=type VI secretion system baseplate subunit TssG;protein_id=WP_016191462.1;transl_table=11 NZ_CP089940.1 RefSeq gene 225770 227647 . - . ID=gene-LU631_RS01150;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LU631_RS01150;old_locus_tag=LU631_01150 NZ_CP089940.1 Protein Homology CDS 225770 227647 . - 0 ID=cds-WP_016191461.1;Parent=gene-LU631_RS01150;Dbxref=Genbank:WP_016191461.1;Name=WP_016191461.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875821.1;locus_tag=LU631_RS01150;product=type VI secretion system baseplate subunit TssF;protein_id=WP_016191461.1;transl_table=11 NZ_CP089940.1 RefSeq gene 228256 230946 . + . ID=gene-LU631_RS01155;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=LU631_RS01155;old_locus_tag=LU631_01155 NZ_CP089940.1 Protein Homology CDS 228256 230946 . + 0 ID=cds-WP_016191460.1;Parent=gene-LU631_RS01155;Dbxref=Genbank:WP_016191460.1;Name=WP_016191460.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749066.1;locus_tag=LU631_RS01155;product=type VI secretion system ATPase TssH;protein_id=WP_016191460.1;transl_table=11 NZ_CP089940.1 RefSeq gene 231021 231572 . + . ID=gene-LU631_RS01160;Name=LU631_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01160;old_locus_tag=LU631_01160 NZ_CP089940.1 Protein Homology CDS 231021 231572 . + 0 ID=cds-WP_016191459.1;Parent=gene-LU631_RS01160;Dbxref=Genbank:WP_016191459.1;Name=WP_016191459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728506.1;locus_tag=LU631_RS01160;product=fimbrial protein;protein_id=WP_016191459.1;transl_table=11 NZ_CP089940.1 RefSeq gene 231732 232478 . + . ID=gene-LU631_RS01165;Name=LU631_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01165;old_locus_tag=LU631_01165 NZ_CP089940.1 Protein Homology CDS 231732 232478 . + 0 ID=cds-WP_040465639.1;Parent=gene-LU631_RS01165;Dbxref=Genbank:WP_040465639.1;Name=WP_040465639.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699305.1;locus_tag=LU631_RS01165;product=fimbria/pilus periplasmic chaperone;protein_id=WP_040465639.1;transl_table=11 NZ_CP089940.1 RefSeq gene 232585 235221 . + . ID=gene-LU631_RS01170;Name=LU631_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01170;old_locus_tag=LU631_01170 NZ_CP089940.1 Protein Homology CDS 232585 235221 . + 0 ID=cds-WP_152664228.1;Parent=gene-LU631_RS01170;Dbxref=Genbank:WP_152664228.1;Name=WP_152664228.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012786.2;locus_tag=LU631_RS01170;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_152664228.1;transl_table=11 NZ_CP089940.1 RefSeq gene 235209 235802 . + . ID=gene-LU631_RS01175;Name=LU631_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01175;old_locus_tag=LU631_01175 NZ_CP089940.1 Protein Homology CDS 235209 235802 . + 0 ID=cds-WP_016191456.1;Parent=gene-LU631_RS01175;Dbxref=Genbank:WP_016191456.1;Name=WP_016191456.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012635.2;locus_tag=LU631_RS01175;product=fimbrial protein;protein_id=WP_016191456.1;transl_table=11 NZ_CP089940.1 RefSeq gene 235927 236460 . + . ID=gene-LU631_RS01180;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=LU631_RS01180;old_locus_tag=LU631_01180 NZ_CP089940.1 Protein Homology CDS 235927 236460 . + 0 ID=cds-WP_040465600.1;Parent=gene-LU631_RS01180;Dbxref=Genbank:WP_040465600.1;Name=WP_040465600.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728496.1;locus_tag=LU631_RS01180;product=type VI secretion system contractile sheath small subunit;protein_id=WP_040465600.1;transl_table=11 NZ_CP089940.1 RefSeq gene 236478 237977 . + . ID=gene-LU631_RS01185;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LU631_RS01185;old_locus_tag=LU631_01185 NZ_CP089940.1 Protein Homology CDS 236478 237977 . + 0 ID=cds-WP_016191454.1;Parent=gene-LU631_RS01185;Dbxref=Genbank:WP_016191454.1;Name=WP_016191454.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005157570.1;locus_tag=LU631_RS01185;product=type VI secretion system contractile sheath large subunit;protein_id=WP_016191454.1;transl_table=11 NZ_CP089940.1 RefSeq gene 238129 238614 . + . ID=gene-LU631_RS01190;Name=LU631_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01190;old_locus_tag=LU631_01190 NZ_CP089940.1 Protein Homology CDS 238129 238614 . + 0 ID=cds-WP_016191453.1;Parent=gene-LU631_RS01190;Dbxref=Genbank:WP_016191453.1;Name=WP_016191453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211573.1;locus_tag=LU631_RS01190;product=Hcp family type VI secretion system effector;protein_id=WP_016191453.1;transl_table=11 NZ_CP089940.1 RefSeq gene 238745 239293 . + . ID=gene-LU631_RS01195;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LU631_RS01195;old_locus_tag=LU631_01195 NZ_CP089940.1 Protein Homology CDS 238745 239293 . + 0 ID=cds-WP_046372127.1;Parent=gene-LU631_RS01195;Dbxref=Genbank:WP_046372127.1;Name=WP_046372127.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR03352.1;locus_tag=LU631_RS01195;product=type VI secretion system lipoprotein TssJ;protein_id=WP_046372127.1;transl_table=11 NZ_CP089940.1 RefSeq gene 239297 240643 . + . ID=gene-LU631_RS01200;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LU631_RS01200;old_locus_tag=LU631_01200 NZ_CP089940.1 Protein Homology CDS 239297 240643 . + 0 ID=cds-WP_016191451.1;Parent=gene-LU631_RS01200;Dbxref=Genbank:WP_016191451.1;Name=WP_016191451.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007848145.1;locus_tag=LU631_RS01200;product=type VI secretion system baseplate subunit TssK;protein_id=WP_016191451.1;transl_table=11 NZ_CP089940.1 RefSeq gene 240643 242010 . + . ID=gene-LU631_RS01205;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=LU631_RS01205;old_locus_tag=LU631_01205 NZ_CP089940.1 Protein Homology CDS 240643 242010 . + 0 ID=cds-WP_016191450.1;Parent=gene-LU631_RS01205;Dbxref=Genbank:WP_016191450.1;Name=WP_016191450.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906931.1;locus_tag=LU631_RS01205;product=type VI secretion system protein TssL%2C long form;protein_id=WP_016191450.1;transl_table=11 NZ_CP089940.1 RefSeq gene 242022 245831 . + . ID=gene-LU631_RS01210;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=LU631_RS01210;old_locus_tag=LU631_01210 NZ_CP089940.1 Protein Homology CDS 242022 245831 . + 0 ID=cds-WP_016191449.1;Parent=gene-LU631_RS01210;Dbxref=Genbank:WP_016191449.1;Name=WP_016191449.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssM;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR03348.1;locus_tag=LU631_RS01210;product=type VI secretion system membrane subunit TssM;protein_id=WP_016191449.1;transl_table=11 NZ_CP089940.1 RefSeq gene 245883 246527 . + . ID=gene-LU631_RS01215;Name=LU631_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01215;old_locus_tag=LU631_01215 NZ_CP089940.1 GeneMarkS-2+ CDS 245883 246527 . + 0 ID=cds-WP_052734722.1;Parent=gene-LU631_RS01215;Dbxref=Genbank:WP_052734722.1;Name=WP_052734722.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS01215;product=hypothetical protein;protein_id=WP_052734722.1;transl_table=11 NZ_CP089940.1 RefSeq gene 246585 248948 . + . ID=gene-LU631_RS01220;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=LU631_RS01220;old_locus_tag=LU631_01220 NZ_CP089940.1 Protein Homology CDS 246585 248948 . + 0 ID=cds-WP_233481973.1;Parent=gene-LU631_RS01220;Dbxref=Genbank:WP_233481973.1;Name=WP_233481973.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssI;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906929.1;locus_tag=LU631_RS01220;product=type VI secretion system tip protein TssI/VgrG;protein_id=WP_233481973.1;transl_table=11 NZ_CP089940.1 RefSeq gene 249072 249341 . + . ID=gene-LU631_RS01225;Name=LU631_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01225;old_locus_tag=LU631_01225 NZ_CP089940.1 Protein Homology CDS 249072 249341 . + 0 ID=cds-WP_016191446.1;Parent=gene-LU631_RS01225;Dbxref=Genbank:WP_016191446.1;Name=WP_016191446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209684.1;locus_tag=LU631_RS01225;product=PAAR domain-containing protein;protein_id=WP_016191446.1;transl_table=11 NZ_CP089940.1 RefSeq gene 249404 250183 . + . ID=gene-LU631_RS01230;Name=LU631_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01230;old_locus_tag=LU631_01230 NZ_CP089940.1 Protein Homology CDS 249404 250183 . + 0 ID=cds-WP_157275236.1;Parent=gene-LU631_RS01230;Dbxref=Genbank:WP_157275236.1;Name=WP_157275236.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033419.1;locus_tag=LU631_RS01230;product=TagK domain-containing protein;protein_id=WP_157275236.1;transl_table=11 NZ_CP089940.1 RefSeq gene 250202 250999 . + . ID=gene-LU631_RS01235;Name=LU631_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01235;old_locus_tag=LU631_01235 NZ_CP089940.1 Protein Homology CDS 250202 250999 . + 0 ID=cds-WP_016191444.1;Parent=gene-LU631_RS01235;Dbxref=Genbank:WP_016191444.1;Name=WP_016191444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906927.1;locus_tag=LU631_RS01235;product=type VI secretion system accessory protein TagJ;protein_id=WP_016191444.1;transl_table=11 NZ_CP089940.1 RefSeq gene 251011 251502 . + . ID=gene-LU631_RS01240;Name=LU631_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01240;old_locus_tag=LU631_01240 NZ_CP089940.1 Protein Homology CDS 251011 251502 . + 0 ID=cds-WP_016191443.1;Parent=gene-LU631_RS01240;Dbxref=Genbank:WP_016191443.1;Name=WP_016191443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005168546.1;locus_tag=LU631_RS01240;product=GPW/gp25 family protein;protein_id=WP_016191443.1;transl_table=11 NZ_CP089940.1 RefSeq gene 251762 252802 . - . ID=gene-LU631_RS01245;Name=LU631_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01245;old_locus_tag=LU631_01245 NZ_CP089940.1 Protein Homology CDS 251762 252802 . - 0 ID=cds-WP_046372128.1;Parent=gene-LU631_RS01245;Dbxref=Genbank:WP_046372128.1;Name=WP_046372128.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS01245;product=IS481 family transposase;protein_id=WP_046372128.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 252947 253643 . - . ID=gene-LU631_RS01250;Name=LU631_RS01250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01250;old_locus_tag=LU631_01250;pseudo=true NZ_CP089940.1 Protein Homology CDS 252947 253643 . - 0 ID=cds-LU631_RS01250;Parent=gene-LU631_RS01250;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=LU631_RS01250;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 254600 255205 . + . ID=gene-LU631_RS01255;Name=LU631_RS01255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01255;old_locus_tag=LU631_01255;pseudo=true NZ_CP089940.1 Protein Homology CDS 254600 255205 . + 0 ID=cds-LU631_RS01255;Parent=gene-LU631_RS01255;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=LU631_RS01255;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 255447 255536 . + . ID=gene-LU631_RS01260;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=LU631_RS01260;old_locus_tag=LU631_01260 NZ_CP089940.1 Protein Homology CDS 255447 255536 . + 0 ID=cds-WP_124232527.1;Parent=gene-LU631_RS01260;Dbxref=Genbank:WP_124232527.1;Name=WP_124232527.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=LU631_RS01260;product=K(+)-transporting ATPase subunit F;protein_id=WP_124232527.1;transl_table=11 NZ_CP089940.1 RefSeq gene 255536 257221 . + . ID=gene-LU631_RS01265;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=LU631_RS01265;old_locus_tag=LU631_01265 NZ_CP089940.1 Protein Homology CDS 255536 257221 . + 0 ID=cds-WP_016191442.1;Parent=gene-LU631_RS01265;Dbxref=Genbank:WP_016191442.1;Name=WP_016191442.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161013.1;locus_tag=LU631_RS01265;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_016191442.1;transl_table=11 NZ_CP089940.1 RefSeq gene 257240 259288 . + . ID=gene-LU631_RS01270;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=LU631_RS01270;old_locus_tag=LU631_01270 NZ_CP089940.1 Protein Homology CDS 257240 259288 . + 0 ID=cds-WP_016191441.1;Parent=gene-LU631_RS01270;Dbxref=Genbank:WP_016191441.1;Name=WP_016191441.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpB;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204341.1;locus_tag=LU631_RS01270;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_016191441.1;transl_table=11 NZ_CP089940.1 RefSeq gene 259299 259886 . + . ID=gene-LU631_RS01275;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=LU631_RS01275;old_locus_tag=LU631_01275 NZ_CP089940.1 Protein Homology CDS 259299 259886 . + 0 ID=cds-WP_016191440.1;Parent=gene-LU631_RS01275;Dbxref=Genbank:WP_016191440.1;Name=WP_016191440.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542751.1;locus_tag=LU631_RS01275;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_016191440.1;transl_table=11 NZ_CP089940.1 RefSeq gene 260234 262906 . + . ID=gene-LU631_RS01280;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=LU631_RS01280;old_locus_tag=LU631_01280 NZ_CP089940.1 Protein Homology CDS 260234 262906 . + 0 ID=cds-WP_016191439.1;Parent=gene-LU631_RS01280;Dbxref=Genbank:WP_016191439.1;Name=WP_016191439.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204339.1;locus_tag=LU631_RS01280;product=two-component system sensor histidine kinase KdpD;protein_id=WP_016191439.1;transl_table=11 NZ_CP089940.1 RefSeq gene 263338 264462 . - . ID=gene-LU631_RS01285;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=LU631_RS01285;old_locus_tag=LU631_01285 NZ_CP089940.1 Protein Homology CDS 263338 264462 . - 0 ID=cds-WP_016191437.1;Parent=gene-LU631_RS01285;Dbxref=Genbank:WP_016191437.1;Name=WP_016191437.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008924659.1;locus_tag=LU631_RS01285;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_016191437.1;transl_table=11 NZ_CP089940.1 RefSeq gene 264490 265329 . - . ID=gene-LU631_RS01290;Name=LU631_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01290;old_locus_tag=LU631_01290 NZ_CP089940.1 Protein Homology CDS 264490 265329 . - 0 ID=cds-WP_016191436.1;Parent=gene-LU631_RS01290;Dbxref=Genbank:WP_016191436.1;Name=WP_016191436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145023.1;locus_tag=LU631_RS01290;product=carbohydrate ABC transporter permease;protein_id=WP_016191436.1;transl_table=11 NZ_CP089940.1 RefSeq gene 265319 266227 . - . ID=gene-LU631_RS01295;Name=LU631_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01295;old_locus_tag=LU631_01295 NZ_CP089940.1 Protein Homology CDS 265319 266227 . - 0 ID=cds-WP_016191435.1;Parent=gene-LU631_RS01295;Dbxref=Genbank:WP_016191435.1;Name=WP_016191435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799014.1;locus_tag=LU631_RS01295;product=sugar ABC transporter permease;protein_id=WP_016191435.1;transl_table=11 NZ_CP089940.1 RefSeq gene 266237 267487 . - . ID=gene-LU631_RS01300;Name=LU631_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01300;old_locus_tag=LU631_01300 NZ_CP089940.1 Protein Homology CDS 266237 267487 . - 0 ID=cds-WP_016191434.1;Parent=gene-LU631_RS01300;Dbxref=Genbank:WP_016191434.1;Name=WP_016191434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204333.1;locus_tag=LU631_RS01300;product=extracellular solute-binding protein;protein_id=WP_016191434.1;transl_table=11 NZ_CP089940.1 RefSeq gene 267698 268639 . - . ID=gene-LU631_RS01305;Name=LU631_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01305;old_locus_tag=LU631_01305 NZ_CP089940.1 Protein Homology CDS 267698 268639 . - 0 ID=cds-WP_016191433.1;Parent=gene-LU631_RS01305;Dbxref=Genbank:WP_016191433.1;Name=WP_016191433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031933.1;locus_tag=LU631_RS01305;product=ROK family protein;protein_id=WP_016191433.1;transl_table=11 NZ_CP089940.1 RefSeq gene 268636 269661 . - . ID=gene-LU631_RS01310;Name=LU631_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01310;old_locus_tag=LU631_01310 NZ_CP089940.1 Protein Homology CDS 268636 269661 . - 0 ID=cds-WP_016191432.1;Parent=gene-LU631_RS01310;Dbxref=Genbank:WP_016191432.1;Name=WP_016191432.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204331.1;locus_tag=LU631_RS01310;product=SIS domain-containing protein;protein_id=WP_016191432.1;transl_table=11 NZ_CP089940.1 RefSeq gene 269855 270631 . + . ID=gene-LU631_RS01315;Name=LU631_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01315;old_locus_tag=LU631_01315 NZ_CP089940.1 Protein Homology CDS 269855 270631 . + 0 ID=cds-WP_016191431.1;Parent=gene-LU631_RS01315;Dbxref=Genbank:WP_016191431.1;Name=WP_016191431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204330.1;locus_tag=LU631_RS01315;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_016191431.1;transl_table=11 NZ_CP089940.1 RefSeq gene 270708 271355 . - . ID=gene-LU631_RS01320;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=LU631_RS01320;old_locus_tag=LU631_01320 NZ_CP089940.1 Protein Homology CDS 270708 271355 . - 0 ID=cds-WP_016191430.1;Parent=gene-LU631_RS01320;Dbxref=Genbank:WP_016191430.1;Name=WP_016191430.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809664.1;locus_tag=LU631_RS01320;product=metal-binding protein ZinT;protein_id=WP_016191430.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 271540 273298 . + . ID=gene-LU631_RS01325;Name=LU631_RS01325;end_range=273298,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01325;old_locus_tag=LU631_01325;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 271540 273298 . + 0 ID=cds-LU631_RS01325;Parent=gene-LU631_RS01325;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=273298,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012479597.1;locus_tag=LU631_RS01325;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 273367 274491 . - . ID=gene-LU631_RS01330;Name=LU631_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01330;old_locus_tag=LU631_01330 NZ_CP089940.1 Protein Homology CDS 273367 274491 . - 0 ID=cds-WP_016191429.1;Parent=gene-LU631_RS01330;Dbxref=Genbank:WP_016191429.1;Name=WP_016191429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008926336.1;locus_tag=LU631_RS01330;product=GNAT family N-acetyltransferase;protein_id=WP_016191429.1;transl_table=11 NZ_CP089940.1 RefSeq gene 275011 275343 . + . ID=gene-LU631_RS01335;Name=LU631_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01335;old_locus_tag=LU631_01335 NZ_CP089940.1 Protein Homology CDS 275011 275343 . + 0 ID=cds-WP_016191428.1;Parent=gene-LU631_RS01335;Dbxref=Genbank:WP_016191428.1;Name=WP_016191428.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204324.1;locus_tag=LU631_RS01335;product=helix-turn-helix domain-containing protein;protein_id=WP_016191428.1;transl_table=11 NZ_CP089940.1 RefSeq gene 275475 275981 . + . ID=gene-LU631_RS01340;Name=LU631_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01340;old_locus_tag=LU631_01340 NZ_CP089940.1 Protein Homology CDS 275475 275981 . + 0 ID=cds-WP_016191427.1;Parent=gene-LU631_RS01340;Dbxref=Genbank:WP_016191427.1;Name=WP_016191427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004384868.1;locus_tag=LU631_RS01340;product=TIGR00645 family protein;protein_id=WP_016191427.1;transl_table=11 NZ_CP089940.1 RefSeq gene 276216 277133 . + . ID=gene-LU631_RS01345;Name=LU631_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01345;old_locus_tag=LU631_01345 NZ_CP089940.1 Protein Homology CDS 276216 277133 . + 0 ID=cds-WP_046372129.1;Parent=gene-LU631_RS01345;Dbxref=Genbank:WP_046372129.1;Name=WP_046372129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852102.1;locus_tag=LU631_RS01345;product=alpha/beta hydrolase;protein_id=WP_046372129.1;transl_table=11 NZ_CP089940.1 RefSeq gene 277149 278096 . - . ID=gene-LU631_RS01350;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=LU631_RS01350;old_locus_tag=LU631_01350 NZ_CP089940.1 Protein Homology CDS 277149 278096 . - 0 ID=cds-WP_016191425.1;Parent=gene-LU631_RS01350;Dbxref=Genbank:WP_016191425.1;Name=WP_016191425.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439917.1;locus_tag=LU631_RS01350;product=type I pantothenate kinase;protein_id=WP_016191425.1;transl_table=11 NZ_CP089940.1 RefSeq gene 279205 279280 . + . ID=gene-LU631_RS01355;Name=LU631_RS01355;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS01355;old_locus_tag=LU631_01355 NZ_CP089940.1 tRNAscan-SE tRNA 279205 279280 . + . ID=rna-LU631_RS01355;Parent=gene-LU631_RS01355;anticodon=(pos:279238..279240);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS01355;product=tRNA-Thr NZ_CP089940.1 tRNAscan-SE exon 279205 279280 . + . ID=exon-LU631_RS01355-1;Parent=rna-LU631_RS01355;anticodon=(pos:279238..279240);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS01355;product=tRNA-Thr NZ_CP089940.1 RefSeq gene 279293 279377 . + . ID=gene-LU631_RS01360;Name=LU631_RS01360;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS01360;old_locus_tag=LU631_01360 NZ_CP089940.1 tRNAscan-SE tRNA 279293 279377 . + . ID=rna-LU631_RS01360;Parent=gene-LU631_RS01360;anticodon=(pos:279327..279329);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS01360;product=tRNA-Tyr NZ_CP089940.1 tRNAscan-SE exon 279293 279377 . + . ID=exon-LU631_RS01360-1;Parent=rna-LU631_RS01360;anticodon=(pos:279327..279329);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS01360;product=tRNA-Tyr NZ_CP089940.1 RefSeq gene 279525 279599 . + . ID=gene-LU631_RS01365;Name=LU631_RS01365;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS01365;old_locus_tag=LU631_01365 NZ_CP089940.1 tRNAscan-SE tRNA 279525 279599 . + . ID=rna-LU631_RS01365;Parent=gene-LU631_RS01365;anticodon=(pos:279558..279560);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS01365;product=tRNA-Gly NZ_CP089940.1 tRNAscan-SE exon 279525 279599 . + . ID=exon-LU631_RS01365-1;Parent=rna-LU631_RS01365;anticodon=(pos:279558..279560);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS01365;product=tRNA-Gly NZ_CP089940.1 RefSeq gene 279606 279681 . + . ID=gene-LU631_RS01370;Name=LU631_RS01370;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS01370;old_locus_tag=LU631_01370 NZ_CP089940.1 tRNAscan-SE tRNA 279606 279681 . + . ID=rna-LU631_RS01370;Parent=gene-LU631_RS01370;anticodon=(pos:279639..279641);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS01370;product=tRNA-Thr NZ_CP089940.1 tRNAscan-SE exon 279606 279681 . + . ID=exon-LU631_RS01370-1;Parent=rna-LU631_RS01370;anticodon=(pos:279639..279641);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS01370;product=tRNA-Thr NZ_CP089940.1 RefSeq gene 279795 280979 . + . ID=gene-LU631_RS01375;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LU631_RS01375;old_locus_tag=LU631_01375 NZ_CP089940.1 Protein Homology CDS 279795 280979 . + 0 ID=cds-WP_016191423.1;Parent=gene-LU631_RS01375;Dbxref=Genbank:WP_016191423.1;Name=WP_016191423.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147227.1;locus_tag=LU631_RS01375;product=elongation factor Tu;protein_id=WP_016191423.1;transl_table=11 NZ_CP089940.1 RefSeq gene 281332 281715 . + . ID=gene-LU631_RS01380;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=LU631_RS01380;old_locus_tag=LU631_01380 NZ_CP089940.1 Protein Homology CDS 281332 281715 . + 0 ID=cds-WP_016191422.1;Parent=gene-LU631_RS01380;Dbxref=Genbank:WP_016191422.1;Name=WP_016191422.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=LU631_RS01380;product=preprotein translocase subunit SecE;protein_id=WP_016191422.1;transl_table=11 NZ_CP089940.1 RefSeq gene 281717 282262 . + . ID=gene-LU631_RS01385;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=LU631_RS01385;old_locus_tag=LU631_01385 NZ_CP089940.1 Protein Homology CDS 281717 282262 . + 0 ID=cds-WP_016191421.1;Parent=gene-LU631_RS01385;Dbxref=Genbank:WP_016191421.1;Name=WP_016191421.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953928.1;locus_tag=LU631_RS01385;product=transcription termination/antitermination protein NusG;protein_id=WP_016191421.1;transl_table=11 NZ_CP089940.1 RefSeq gene 282447 282875 . + . ID=gene-LU631_RS01390;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=LU631_RS01390;old_locus_tag=LU631_01390 NZ_CP089940.1 Protein Homology CDS 282447 282875 . + 0 ID=cds-WP_012439921.1;Parent=gene-LU631_RS01390;Dbxref=Genbank:WP_012439921.1;Name=WP_012439921.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=LU631_RS01390;product=50S ribosomal protein L11;protein_id=WP_012439921.1;transl_table=11 NZ_CP089940.1 RefSeq gene 282879 283583 . + . ID=gene-LU631_RS01395;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=LU631_RS01395;old_locus_tag=LU631_01395 NZ_CP089940.1 Protein Homology CDS 282879 283583 . + 0 ID=cds-WP_016191420.1;Parent=gene-LU631_RS01395;Dbxref=Genbank:WP_016191420.1;Name=WP_016191420.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312934.1;locus_tag=LU631_RS01395;product=50S ribosomal protein L1;protein_id=WP_016191420.1;transl_table=11 NZ_CP089940.1 RefSeq gene 284010 284507 . + . ID=gene-LU631_RS01400;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=LU631_RS01400;old_locus_tag=LU631_01400 NZ_CP089940.1 Protein Homology CDS 284010 284507 . + 0 ID=cds-WP_016191419.1;Parent=gene-LU631_RS01400;Dbxref=Genbank:WP_016191419.1;Name=WP_016191419.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=LU631_RS01400;product=50S ribosomal protein L10;protein_id=WP_016191419.1;transl_table=11 NZ_CP089940.1 RefSeq gene 284574 284939 . + . ID=gene-LU631_RS01405;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=LU631_RS01405;old_locus_tag=LU631_01405 NZ_CP089940.1 Protein Homology CDS 284574 284939 . + 0 ID=cds-WP_016191418.1;Parent=gene-LU631_RS01405;Dbxref=Genbank:WP_016191418.1;Name=WP_016191418.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=LU631_RS01405;product=50S ribosomal protein L7/L12;protein_id=WP_016191418.1;transl_table=11 NZ_CP089940.1 RefSeq gene 285280 289308 . + . ID=gene-LU631_RS01410;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=LU631_RS01410;old_locus_tag=LU631_01410 NZ_CP089940.1 Protein Homology CDS 285280 289308 . + 0 ID=cds-WP_233481974.1;Parent=gene-LU631_RS01410;Dbxref=Genbank:WP_233481974.1;Name=WP_233481974.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=LU631_RS01410;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_233481974.1;transl_table=11 NZ_CP089940.1 RefSeq gene 289384 293604 . + . ID=gene-LU631_RS01415;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=LU631_RS01415;old_locus_tag=LU631_01415 NZ_CP089940.1 Protein Homology CDS 289384 293604 . + 0 ID=cds-WP_016191416.1;Parent=gene-LU631_RS01415;Dbxref=Genbank:WP_016191416.1;Name=WP_016191416.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200298.1;locus_tag=LU631_RS01415;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_016191416.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 293717 294294 . + . ID=gene-LU631_RS01420;Name=LU631_RS01420;end_range=294294,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01420;old_locus_tag=LU631_01420;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 293717 294294 . + 0 ID=cds-LU631_RS01420;Parent=gene-LU631_RS01420;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=294294,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001179707.1;locus_tag=LU631_RS01420;partial=true;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 294374 295504 . - . ID=gene-LU631_RS01425;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=pseudogene;locus_tag=LU631_RS01425;old_locus_tag=LU631_01425;pseudo=true NZ_CP089940.1 Protein Homology CDS 294374 295504 . - 0 ID=cds-LU631_RS01425;Parent=gene-LU631_RS01425;Note=internal stop;Ontology_term=GO:0009228,GO:0016829,GO:1904047;gbkey=CDS;gene=thiH;go_function=lyase activity|0016829||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089444.1;locus_tag=LU631_RS01425;product=2-iminoacetate synthase ThiH;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 295501 296277 . - . ID=gene-LU631_RS01430;Name=LU631_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01430;old_locus_tag=LU631_01430 NZ_CP089940.1 Protein Homology CDS 295501 296277 . - 0 ID=cds-WP_016191413.1;Parent=gene-LU631_RS01430;Dbxref=Genbank:WP_016191413.1;Name=WP_016191413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004747.1;locus_tag=LU631_RS01430;product=thiazole synthase;protein_id=WP_016191413.1;transl_table=11 NZ_CP089940.1 RefSeq gene 296280 296480 . - . ID=gene-LU631_RS01435;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=LU631_RS01435;old_locus_tag=LU631_01435 NZ_CP089940.1 Protein Homology CDS 296280 296480 . - 0 ID=cds-WP_016191412.1;Parent=gene-LU631_RS01435;Dbxref=Genbank:WP_016191412.1;Name=WP_016191412.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492754.1;locus_tag=LU631_RS01435;product=sulfur carrier protein ThiS;protein_id=WP_016191412.1;transl_table=11 NZ_CP089940.1 RefSeq gene 296464 297225 . - . ID=gene-LU631_RS01440;Name=LU631_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01440;old_locus_tag=LU631_01440 NZ_CP089940.1 Protein Homology CDS 296464 297225 . - 0 ID=cds-WP_016191411.1;Parent=gene-LU631_RS01440;Dbxref=Genbank:WP_016191411.1;Name=WP_016191411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015344231.1;locus_tag=LU631_RS01440;product=HesA/MoeB/ThiF family protein;protein_id=WP_016191411.1;transl_table=11 NZ_CP089940.1 RefSeq gene 297215 297862 . - . ID=gene-LU631_RS01445;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=LU631_RS01445;old_locus_tag=LU631_01445 NZ_CP089940.1 Protein Homology CDS 297215 297862 . - 0 ID=cds-WP_016191410.1;Parent=gene-LU631_RS01445;Dbxref=Genbank:WP_016191410.1;Name=WP_016191410.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200304.1;locus_tag=LU631_RS01445;product=thiamine phosphate synthase;protein_id=WP_016191410.1;transl_table=11 NZ_CP089940.1 RefSeq gene 297859 299793 . - . ID=gene-LU631_RS01450;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=LU631_RS01450;old_locus_tag=LU631_01450 NZ_CP089940.1 Protein Homology CDS 297859 299793 . - 0 ID=cds-WP_016191409.1;Parent=gene-LU631_RS01450;Dbxref=Genbank:WP_016191409.1;Name=WP_016191409.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200305.1;locus_tag=LU631_RS01450;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_016191409.1;transl_table=11 NZ_CP089940.1 cmsearch riboswitch 299885 299985 . - . ID=id-NZ_CP089940.1:299885..299985;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP089940.1 RefSeq gene 300105 300614 . - . ID=gene-LU631_RS01455;Name=LU631_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01455;old_locus_tag=LU631_01455 NZ_CP089940.1 Protein Homology CDS 300105 300614 . - 0 ID=cds-WP_016191408.1;Parent=gene-LU631_RS01455;Dbxref=Genbank:WP_016191408.1;Name=WP_016191408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542986.1;locus_tag=LU631_RS01455;product=Rsd/AlgQ family anti-sigma factor;protein_id=WP_016191408.1;transl_table=11 NZ_CP089940.1 RefSeq gene 300700 301473 . + . ID=gene-LU631_RS01460;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=LU631_RS01460;old_locus_tag=LU631_01460 NZ_CP089940.1 Protein Homology CDS 300700 301473 . + 0 ID=cds-WP_016191407.1;Parent=gene-LU631_RS01460;Dbxref=Genbank:WP_016191407.1;Name=WP_016191407.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830249.1;locus_tag=LU631_RS01460;product=NAD(+) diphosphatase;protein_id=WP_016191407.1;transl_table=11 NZ_CP089940.1 RefSeq gene 301512 302579 . + . ID=gene-LU631_RS01465;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=LU631_RS01465;old_locus_tag=LU631_01465 NZ_CP089940.1 Protein Homology CDS 301512 302579 . + 0 ID=cds-WP_016191406.1;Parent=gene-LU631_RS01465;Dbxref=Genbank:WP_016191406.1;Name=WP_016191406.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013035768.1;locus_tag=LU631_RS01465;product=uroporphyrinogen decarboxylase;protein_id=WP_016191406.1;transl_table=11 NZ_CP089940.1 RefSeq gene 302581 303249 . + . ID=gene-LU631_RS01470;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=LU631_RS01470;old_locus_tag=LU631_01470 NZ_CP089940.1 Protein Homology CDS 302581 303249 . + 0 ID=cds-WP_016191405.1;Parent=gene-LU631_RS01470;Dbxref=Genbank:WP_016191405.1;Name=WP_016191405.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200310.1;locus_tag=LU631_RS01470;product=deoxyribonuclease V;protein_id=WP_016191405.1;transl_table=11 NZ_CP089940.1 RefSeq gene 303317 303907 . + . ID=gene-LU631_RS01475;Name=LU631_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01475;old_locus_tag=LU631_01475 NZ_CP089940.1 Protein Homology CDS 303317 303907 . + 0 ID=cds-WP_016191404.1;Parent=gene-LU631_RS01475;Dbxref=Genbank:WP_016191404.1;Name=WP_016191404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418427.1;locus_tag=LU631_RS01475;product=YjaG family protein;protein_id=WP_016191404.1;transl_table=11 NZ_CP089940.1 RefSeq gene 304096 304368 . + . ID=gene-LU631_RS01480;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=LU631_RS01480;old_locus_tag=LU631_01480 NZ_CP089940.1 Protein Homology CDS 304096 304368 . + 0 ID=cds-WP_002438605.1;Parent=gene-LU631_RS01480;Dbxref=Genbank:WP_002438605.1;Name=WP_002438605.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=LU631_RS01480;product=DNA-binding protein HU-alpha;protein_id=WP_002438605.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 304536 304976 . + . ID=gene-LU631_RS01485;Name=tnpA;end_range=304976,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS01485;old_locus_tag=LU631_01485;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 304536 304976 . + 0 ID=cds-LU631_RS01485;Parent=gene-LU631_RS01485;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=304976,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000525033.1;locus_tag=LU631_RS01485;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 305167 305316 . + . ID=gene-LU631_RS01490;Name=LU631_RS01490;end_range=305316,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01490;old_locus_tag=LU631_01490;partial=true;pseudo=true;start_range=.,305167 NZ_CP089940.1 Protein Homology CDS 305167 305316 . + 0 ID=cds-LU631_RS01490;Parent=gene-LU631_RS01490;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=305316,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927715.1;locus_tag=LU631_RS01490;partial=true;product=sugar phosphate isomerase/epimerase;pseudo=true;start_range=.,305167;transl_table=11 NZ_CP089940.1 RefSeq gene 305480 306760 . - . ID=gene-LU631_RS01495;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=LU631_RS01495;old_locus_tag=LU631_01495 NZ_CP089940.1 Protein Homology CDS 305480 306760 . - 0 ID=cds-WP_016191402.1;Parent=gene-LU631_RS01495;Dbxref=Genbank:WP_016191402.1;Name=WP_016191402.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007886263.1;locus_tag=LU631_RS01495;product=phosphoribosylamine--glycine ligase;protein_id=WP_016191402.1;transl_table=11 NZ_CP089940.1 RefSeq gene 306775 308364 . - . ID=gene-LU631_RS01500;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=LU631_RS01500;old_locus_tag=LU631_01500 NZ_CP089940.1 Protein Homology CDS 306775 308364 . - 0 ID=cds-WP_016191401.1;Parent=gene-LU631_RS01500;Dbxref=Genbank:WP_016191401.1;Name=WP_016191401.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=LU631_RS01500;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_016191401.1;transl_table=11 NZ_CP089940.1 RefSeq gene 308955 310496 . + . ID=gene-LU631_RS01505;Name=LU631_RS01505;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU631_RS01505;old_locus_tag=LU631_01505 NZ_CP089940.1 cmsearch rRNA 308955 310496 . + . ID=rna-LU631_RS01505;Parent=gene-LU631_RS01505;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS01505;product=16S ribosomal RNA NZ_CP089940.1 cmsearch exon 308955 310496 . + . ID=exon-LU631_RS01505-1;Parent=rna-LU631_RS01505;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS01505;product=16S ribosomal RNA NZ_CP089940.1 RefSeq gene 310569 310644 . + . ID=gene-LU631_RS01510;Name=LU631_RS01510;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS01510;old_locus_tag=LU631_01510 NZ_CP089940.1 tRNAscan-SE tRNA 310569 310644 . + . ID=rna-LU631_RS01510;Parent=gene-LU631_RS01510;anticodon=(pos:310603..310605);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS01510;product=tRNA-Glu NZ_CP089940.1 tRNAscan-SE exon 310569 310644 . + . ID=exon-LU631_RS01510-1;Parent=rna-LU631_RS01510;anticodon=(pos:310603..310605);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS01510;product=tRNA-Glu NZ_CP089940.1 RefSeq gene 310847 313749 . + . ID=gene-LU631_RS01515;Name=LU631_RS01515;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU631_RS01515;old_locus_tag=LU631_01515 NZ_CP089940.1 cmsearch rRNA 310847 313749 . + . ID=rna-LU631_RS01515;Parent=gene-LU631_RS01515;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS01515;product=23S ribosomal RNA NZ_CP089940.1 cmsearch exon 310847 313749 . + . ID=exon-LU631_RS01515-1;Parent=rna-LU631_RS01515;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS01515;product=23S ribosomal RNA NZ_CP089940.1 RefSeq gene 313953 314068 . + . ID=gene-LU631_RS01520;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LU631_RS01520;old_locus_tag=LU631_01520 NZ_CP089940.1 cmsearch rRNA 313953 314068 . + . ID=rna-LU631_RS01520;Parent=gene-LU631_RS01520;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS01520;product=5S ribosomal RNA NZ_CP089940.1 cmsearch exon 313953 314068 . + . ID=exon-LU631_RS01520-1;Parent=rna-LU631_RS01520;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS01520;product=5S ribosomal RNA NZ_CP089940.1 RefSeq gene 314206 314352 . + . ID=gene-LU631_RS01525;Name=LU631_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01525;old_locus_tag=LU631_01525 NZ_CP089940.1 GeneMarkS-2+ CDS 314206 314352 . + 0 ID=cds-WP_161796987.1;Parent=gene-LU631_RS01525;Dbxref=Genbank:WP_161796987.1;Name=WP_161796987.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS01525;product=hypothetical protein;protein_id=WP_161796987.1;transl_table=11 NZ_CP089940.1 RefSeq gene 315220 316149 . + . ID=gene-LU631_RS01530;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=LU631_RS01530;old_locus_tag=LU631_01530 NZ_CP089940.1 Protein Homology CDS 315220 316149 . + 0 ID=cds-WP_016191399.1;Parent=gene-LU631_RS01530;Dbxref=Genbank:WP_016191399.1;Name=WP_016191399.1;Ontology_term=GO:0009086,GO:0008899;gbkey=CDS;gene=metA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312958.1;locus_tag=LU631_RS01530;product=homoserine O-succinyltransferase;protein_id=WP_016191399.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 316792 317037 . + . ID=gene-LU631_RS01535;Name=LU631_RS01535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01535;old_locus_tag=LU631_01535;partial=true;pseudo=true;start_range=.,316792 NZ_CP089940.1 Protein Homology CDS 316792 317037 . + 0 ID=cds-LU631_RS01535;Parent=gene-LU631_RS01535;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936660.1;locus_tag=LU631_RS01535;partial=true;product=ABC transporter substrate-binding protein;pseudo=true;start_range=.,316792;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 317047 317666 . + . ID=gene-LU631_RS01540;Name=LU631_RS01540;end_range=317666,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01540;old_locus_tag=LU631_01540;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 317047 317666 . + 0 ID=cds-LU631_RS01540;Parent=gene-LU631_RS01540;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=317666,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024150.1;locus_tag=LU631_RS01540;partial=true;product=alkaline phosphatase family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 317691 318066 . + . ID=gene-LU631_RS01545;Name=LU631_RS01545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01545;old_locus_tag=LU631_01545;partial=true;pseudo=true;start_range=.,317691 NZ_CP089940.1 Protein Homology CDS 317691 318066 . + 0 ID=cds-LU631_RS01545;Parent=gene-LU631_RS01545;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0005524,GO:0022857,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379245.1;locus_tag=LU631_RS01545;partial=true;product=TOBE domain-containing protein;pseudo=true;start_range=.,317691;transl_table=11 NZ_CP089940.1 RefSeq gene 318195 319820 . + . ID=gene-LU631_RS01550;Name=LU631_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01550;old_locus_tag=LU631_01550 NZ_CP089940.1 Protein Homology CDS 318195 319820 . + 0 ID=cds-WP_016191394.1;Parent=gene-LU631_RS01550;Dbxref=Genbank:WP_016191394.1;Name=WP_016191394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542579.1;locus_tag=LU631_RS01550;product=Na/Pi cotransporter family protein;protein_id=WP_016191394.1;transl_table=11 NZ_CP089940.1 RefSeq gene 319852 320769 . - . ID=gene-LU631_RS01555;Name=LU631_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01555;old_locus_tag=LU631_01555 NZ_CP089940.1 Protein Homology CDS 319852 320769 . - 0 ID=cds-WP_016191393.1;Parent=gene-LU631_RS01555;Dbxref=Genbank:WP_016191393.1;Name=WP_016191393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200334.1;locus_tag=LU631_RS01555;product=bile acid:sodium symporter family protein;protein_id=WP_016191393.1;transl_table=11 NZ_CP089940.1 RefSeq gene 321418 322773 . - . ID=gene-LU631_RS01560;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=LU631_RS01560;old_locus_tag=LU631_01560 NZ_CP089940.1 Protein Homology CDS 321418 322773 . - 0 ID=cds-WP_016191392.1;Parent=gene-LU631_RS01560;Dbxref=Genbank:WP_016191392.1;Name=WP_016191392.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171107.1;locus_tag=LU631_RS01560;product=lysine-sensitive aspartokinase 3;protein_id=WP_016191392.1;transl_table=11 NZ_CP089940.1 cmsearch riboswitch 322869 323116 . - . ID=id-NZ_CP089940.1:322869..323116;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP089940.1 RefSeq gene 323660 325309 . + . ID=gene-LU631_RS01565;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=LU631_RS01565;old_locus_tag=LU631_01565 NZ_CP089940.1 Protein Homology CDS 323660 325309 . + 0 ID=cds-WP_016191391.1;Parent=gene-LU631_RS01565;Dbxref=Genbank:WP_016191391.1;Name=WP_016191391.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016517411.1;locus_tag=LU631_RS01565;product=glucose-6-phosphate isomerase;protein_id=WP_016191391.1;transl_table=11 NZ_CP089940.1 RefSeq gene 325865 326113 . + . ID=gene-LU631_RS01570;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=LU631_RS01570;old_locus_tag=LU631_01570 NZ_CP089940.1 Protein Homology CDS 325865 326113 . + 0 ID=cds-WP_016191390.1;Parent=gene-LU631_RS01570;Dbxref=Genbank:WP_016191390.1;Name=WP_016191390.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010252668.1;locus_tag=LU631_RS01570;product=exopolysaccharide production protein YjbE;protein_id=WP_016191390.1;transl_table=11 NZ_CP089940.1 RefSeq gene 326193 326840 . + . ID=gene-LU631_RS01575;Name=LU631_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01575;old_locus_tag=LU631_01575 NZ_CP089940.1 Protein Homology CDS 326193 326840 . + 0 ID=cds-WP_016191389.1;Parent=gene-LU631_RS01575;Dbxref=Genbank:WP_016191389.1;Name=WP_016191389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171103.1;locus_tag=LU631_RS01575;product=YjbF family lipoprotein;protein_id=WP_016191389.1;transl_table=11 NZ_CP089940.1 RefSeq gene 326837 327592 . + . ID=gene-LU631_RS01580;Name=LU631_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01580;old_locus_tag=LU631_01580 NZ_CP089940.1 Protein Homology CDS 326837 327592 . + 0 ID=cds-WP_016191388.1;Parent=gene-LU631_RS01580;Dbxref=Genbank:WP_016191388.1;Name=WP_016191388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160507.1;locus_tag=LU631_RS01580;product=capsule biosynthesis GfcC family protein;protein_id=WP_016191388.1;transl_table=11 NZ_CP089940.1 RefSeq gene 327592 329688 . + . ID=gene-LU631_RS01585;Name=LU631_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01585;old_locus_tag=LU631_01585 NZ_CP089940.1 Protein Homology CDS 327592 329688 . + 0 ID=cds-WP_016191387.1;Parent=gene-LU631_RS01585;Dbxref=Genbank:WP_016191387.1;Name=WP_016191387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160506.1;locus_tag=LU631_RS01585;product=YjbH domain-containing protein;protein_id=WP_016191387.1;transl_table=11 NZ_CP089940.1 RefSeq gene 329842 330240 . + . ID=gene-LU631_RS01590;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=LU631_RS01590;old_locus_tag=LU631_01590 NZ_CP089940.1 Protein Homology CDS 329842 330240 . + 0 ID=cds-WP_016191386.1;Parent=gene-LU631_RS01590;Dbxref=Genbank:WP_016191386.1;Name=WP_016191386.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200341.1;locus_tag=LU631_RS01590;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_016191386.1;transl_table=11 NZ_CP089940.1 RefSeq gene 330382 330909 . + . ID=gene-LU631_RS01595;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=LU631_RS01595;old_locus_tag=LU631_01595 NZ_CP089940.1 Protein Homology CDS 330382 330909 . + 0 ID=cds-WP_016191385.1;Parent=gene-LU631_RS01595;Dbxref=Genbank:WP_016191385.1;Name=WP_016191385.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539619.1;locus_tag=LU631_RS01595;product=chorismate lyase;protein_id=WP_016191385.1;transl_table=11 NZ_CP089940.1 RefSeq gene 330911 331795 . + . ID=gene-LU631_RS01600;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=LU631_RS01600;old_locus_tag=LU631_01600 NZ_CP089940.1 Protein Homology CDS 330911 331795 . + 0 ID=cds-WP_016191384.1;Parent=gene-LU631_RS01600;Dbxref=Genbank:WP_016191384.1;Name=WP_016191384.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009128586.1;locus_tag=LU631_RS01600;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_016191384.1;transl_table=11 NZ_CP089940.1 RefSeq gene 331969 334389 . - . ID=gene-LU631_RS01605;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=LU631_RS01605;old_locus_tag=LU631_01605 NZ_CP089940.1 Protein Homology CDS 331969 334389 . - 0 ID=cds-WP_016191383.1;Parent=gene-LU631_RS01605;Dbxref=Genbank:WP_016191383.1;Name=WP_016191383.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010252237.1;locus_tag=LU631_RS01605;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_016191383.1;transl_table=11 NZ_CP089940.1 RefSeq gene 334519 334887 . + . ID=gene-LU631_RS01610;Name=LU631_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01610;old_locus_tag=LU631_01610 NZ_CP089940.1 Protein Homology CDS 334519 334887 . + 0 ID=cds-WP_016191382.1;Parent=gene-LU631_RS01610;Dbxref=Genbank:WP_016191382.1;Name=WP_016191382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503365.1;locus_tag=LU631_RS01610;product=diacylglycerol kinase;protein_id=WP_016191382.1;transl_table=11 NZ_CP089940.1 RefSeq gene 334994 335602 . + . ID=gene-LU631_RS01615;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=LU631_RS01615;old_locus_tag=LU631_01615 NZ_CP089940.1 Protein Homology CDS 334994 335602 . + 0 ID=cds-WP_016191381.1;Parent=gene-LU631_RS01615;Dbxref=Genbank:WP_016191381.1;Name=WP_016191381.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=LU631_RS01615;product=transcriptional repressor LexA;protein_id=WP_016191381.1;transl_table=11 NZ_CP089940.1 RefSeq gene 335694 335939 . + . ID=gene-LU631_RS01620;Name=LU631_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01620;old_locus_tag=LU631_01620 NZ_CP089940.1 GeneMarkS-2+ CDS 335694 335939 . + 0 ID=cds-WP_198292525.1;Parent=gene-LU631_RS01620;Dbxref=Genbank:WP_198292525.1;Name=WP_198292525.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS01620;product=hypothetical protein;protein_id=WP_198292525.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 335872 336072 . + . ID=gene-LU631_RS01625;Name=LU631_RS01625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01625;old_locus_tag=LU631_01625;partial=true;pseudo=true;start_range=.,335872 NZ_CP089940.1 Protein Homology CDS 335872 336072 . + 0 ID=cds-LU631_RS01625;Parent=gene-LU631_RS01625;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359775.1;locus_tag=LU631_RS01625;partial=true;product=MATE family efflux transporter DinF;pseudo=true;start_range=.,335872;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 336335 336539 . + . ID=gene-LU631_RS01630;Name=LU631_RS01630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01630;old_locus_tag=LU631_01630;pseudo=true NZ_CP089940.1 Protein Homology CDS 336335 336539 . + 0 ID=cds-LU631_RS01630;Parent=gene-LU631_RS01630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=LU631_RS01630;product=CsbD family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 336662 337177 . - . ID=gene-LU631_RS01635;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=LU631_RS01635;old_locus_tag=LU631_01635 NZ_CP089940.1 Protein Homology CDS 336662 337177 . - 0 ID=cds-WP_016191377.1;Parent=gene-LU631_RS01635;Dbxref=Genbank:WP_016191377.1;Name=WP_016191377.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200349.1;locus_tag=LU631_RS01635;product=zinc uptake transcriptional repressor Zur;protein_id=WP_016191377.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 337764 338486 . - . ID=gene-LU631_RS01640;Name=LU631_RS01640;end_range=338486,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01640;old_locus_tag=LU631_01640;partial=true;pseudo=true;start_range=.,337764 NZ_CP089940.1 Protein Homology CDS 337764 338486 . - 0 ID=cds-LU631_RS01640;Parent=gene-LU631_RS01640;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=338486,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332260.1;locus_tag=LU631_RS01640;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,337764;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 338598 339131 . + . ID=gene-LU631_RS01645;Name=LU631_RS01645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01645;old_locus_tag=LU631_01645;pseudo=true NZ_CP089940.1 Protein Homology CDS 338598 339131 . + 0 ID=cds-LU631_RS01645;Parent=gene-LU631_RS01645;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091963.1;locus_tag=LU631_RS01645;product=recombinase family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 339288 339974 . + . ID=gene-LU631_RS01650;Name=LU631_RS01650;end_range=339974,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01650;old_locus_tag=LU631_01650;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 339288 339974 . + 0 ID=cds-LU631_RS01650;Parent=gene-LU631_RS01650;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=339974,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004148938.1;locus_tag=LU631_RS01650;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 340153 340359 . - . ID=gene-LU631_RS01655;Name=LU631_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01655;old_locus_tag=LU631_01655 NZ_CP089940.1 Protein Homology CDS 340153 340359 . - 0 ID=cds-WP_016191372.1;Parent=gene-LU631_RS01655;Dbxref=Genbank:WP_016191372.1;Name=WP_016191372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311540.1;locus_tag=LU631_RS01655;product=AlpA family transcriptional regulator;protein_id=WP_016191372.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 340620 341829 . + . ID=gene-LU631_RS01660;Name=LU631_RS01660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01660;old_locus_tag=LU631_01660;pseudo=true NZ_CP089940.1 Protein Homology CDS 340620 341829 . + 0 ID=cds-LU631_RS01660;Parent=gene-LU631_RS01660;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS01660;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 341855 341977 . - . ID=gene-LU631_RS01665;Name=LU631_RS01665;end_range=341977,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01665;old_locus_tag=LU631_01665;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 341855 341977 . - 0 ID=cds-LU631_RS01665;Parent=gene-LU631_RS01665;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=341977,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311541.1;locus_tag=LU631_RS01665;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 341994 342691 . - . ID=gene-LU631_RS01670;Name=LU631_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01670;old_locus_tag=LU631_01670 NZ_CP089940.1 Protein Homology CDS 342430 342691 . - 0 ID=cds-WP_233481975.1;Parent=gene-LU631_RS01670;Dbxref=Genbank:WP_233481975.1;Name=WP_233481975.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS01670;product=IS1 family transposase;protein_id=WP_233481975.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 341994 342430 . - 2 ID=cds-WP_233481975.1;Parent=gene-LU631_RS01670;Dbxref=Genbank:WP_233481975.1;Name=WP_233481975.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS01670;product=IS1 family transposase;protein_id=WP_233481975.1;transl_table=11 NZ_CP089940.1 RefSeq gene 342715 343080 . + . ID=gene-LU631_RS01675;Name=LU631_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01675;old_locus_tag=LU631_01675 NZ_CP089940.1 Protein Homology CDS 342715 343080 . + 0 ID=cds-WP_046372133.1;Parent=gene-LU631_RS01675;Dbxref=Genbank:WP_046372133.1;Name=WP_046372133.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017866.2;locus_tag=LU631_RS01675;product=DUF943 family protein;protein_id=WP_046372133.1;transl_table=11 NZ_CP089940.1 RefSeq gene 343639 343914 . - . ID=gene-LU631_RS01680;Name=LU631_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01680;old_locus_tag=LU631_01680 NZ_CP089940.1 Protein Homology CDS 343639 343914 . - 0 ID=cds-WP_016191368.1;Parent=gene-LU631_RS01680;Dbxref=Genbank:WP_016191368.1;Name=WP_016191368.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024252.2;locus_tag=LU631_RS01680;product=helix-turn-helix transcriptional regulator;protein_id=WP_016191368.1;transl_table=11 NZ_CP089940.1 RefSeq gene 344025 344276 . + . ID=gene-LU631_RS01685;Name=LU631_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01685;old_locus_tag=LU631_01685 NZ_CP089940.1 Protein Homology CDS 344025 344276 . + 0 ID=cds-WP_016191367.1;Parent=gene-LU631_RS01685;Dbxref=Genbank:WP_016191367.1;Name=WP_016191367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012773560.1;locus_tag=LU631_RS01685;product=helix-turn-helix transcriptional regulator;protein_id=WP_016191367.1;transl_table=11 NZ_CP089940.1 RefSeq gene 344761 344985 . - . ID=gene-LU631_RS01690;Name=LU631_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01690;old_locus_tag=LU631_01690 NZ_CP089940.1 GeneMarkS-2+ CDS 344761 344985 . - 0 ID=cds-WP_016191366.1;Parent=gene-LU631_RS01690;Dbxref=Genbank:WP_016191366.1;Name=WP_016191366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS01690;product=hypothetical protein;protein_id=WP_016191366.1;transl_table=11 NZ_CP089940.1 RefSeq gene 345035 345385 . - . ID=gene-LU631_RS01695;Name=LU631_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01695;old_locus_tag=LU631_01695 NZ_CP089940.1 Protein Homology CDS 345035 345385 . - 0 ID=cds-WP_016191365.1;Parent=gene-LU631_RS01695;Dbxref=Genbank:WP_016191365.1;Name=WP_016191365.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017273.2;locus_tag=LU631_RS01695;product=AzlD domain-containing protein;protein_id=WP_016191365.1;transl_table=11 NZ_CP089940.1 RefSeq gene 345375 346073 . - . ID=gene-LU631_RS01700;Name=LU631_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01700;old_locus_tag=LU631_01700 NZ_CP089940.1 Protein Homology CDS 345375 346073 . - 0 ID=cds-WP_016191364.1;Parent=gene-LU631_RS01700;Dbxref=Genbank:WP_016191364.1;Name=WP_016191364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009112279.1;locus_tag=LU631_RS01700;product=AzlC family ABC transporter permease;protein_id=WP_016191364.1;transl_table=11 NZ_CP089940.1 RefSeq gene 346076 348055 . - . ID=gene-LU631_RS01705;Name=LU631_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01705;old_locus_tag=LU631_01705 NZ_CP089940.1 Protein Homology CDS 346076 348055 . - 0 ID=cds-WP_016191363.1;Parent=gene-LU631_RS01705;Dbxref=Genbank:WP_016191363.1;Name=WP_016191363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009112280.1;locus_tag=LU631_RS01705;product=helix-turn-helix domain-containing protein;protein_id=WP_016191363.1;transl_table=11 NZ_CP089940.1 RefSeq gene 348252 348584 . + . ID=gene-LU631_RS01710;Name=LU631_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01710;old_locus_tag=LU631_01710 NZ_CP089940.1 Protein Homology CDS 348252 348584 . + 0 ID=cds-WP_016191362.1;Parent=gene-LU631_RS01710;Dbxref=Genbank:WP_016191362.1;Name=WP_016191362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000212737.1;locus_tag=LU631_RS01710;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_016191362.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 348769 348852 . + . ID=gene-LU631_RS01715;Name=LU631_RS01715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01715;old_locus_tag=LU631_01715;partial=true;pseudo=true;start_range=.,348769 NZ_CP089940.1 Protein Homology CDS 348769 348852 . + 0 ID=cds-LU631_RS01715;Parent=gene-LU631_RS01715;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000924288.1;locus_tag=LU631_RS01715;partial=true;product=trimeric intracellular cation channel family protein;pseudo=true;start_range=.,348769;transl_table=11 NZ_CP089940.1 RefSeq gene 348827 350518 . - . ID=gene-LU631_RS01720;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=LU631_RS01720;old_locus_tag=LU631_01720 NZ_CP089940.1 Protein Homology CDS 348827 350518 . - 0 ID=cds-WP_016191361.1;Parent=gene-LU631_RS01720;Dbxref=Genbank:WP_016191361.1;Name=WP_016191361.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200086.1;locus_tag=LU631_RS01720;product=NAD-dependent DNA ligase LigB;protein_id=WP_016191361.1;transl_table=11 NZ_CP089940.1 RefSeq gene 350768 351391 . + . ID=gene-LU631_RS01725;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=LU631_RS01725;old_locus_tag=LU631_01725 NZ_CP089940.1 Protein Homology CDS 350768 351391 . + 0 ID=cds-WP_016191360.1;Parent=gene-LU631_RS01725;Dbxref=Genbank:WP_016191360.1;Name=WP_016191360.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=LU631_RS01725;product=guanylate kinase;protein_id=WP_016191360.1;transl_table=11 NZ_CP089940.1 RefSeq gene 351445 351720 . + . ID=gene-LU631_RS01730;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=LU631_RS01730;old_locus_tag=LU631_01730 NZ_CP089940.1 Protein Homology CDS 351445 351720 . + 0 ID=cds-WP_016191359.1;Parent=gene-LU631_RS01730;Dbxref=Genbank:WP_016191359.1;Name=WP_016191359.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=LU631_RS01730;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_016191359.1;transl_table=11 NZ_CP089940.1 RefSeq gene 351743 353857 . + . ID=gene-LU631_RS01735;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=LU631_RS01735;old_locus_tag=LU631_01735 NZ_CP089940.1 Protein Homology CDS 351743 353857 . + 0 ID=cds-WP_016191358.1;Parent=gene-LU631_RS01735;Dbxref=Genbank:WP_016191358.1;Name=WP_016191358.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=LU631_RS01735;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_016191358.1;transl_table=11 NZ_CP089940.1 RefSeq gene 353861 354559 . + . ID=gene-LU631_RS01740;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=LU631_RS01740;old_locus_tag=LU631_01740 NZ_CP089940.1 Protein Homology CDS 353861 354559 . + 0 ID=cds-WP_016191357.1;Parent=gene-LU631_RS01740;Dbxref=Genbank:WP_016191357.1;Name=WP_016191357.1;Ontology_term=GO:0030488,GO:0008173,GO:0009020;gbkey=CDS;gene=trmH;go_function=RNA methyltransferase activity|0008173||IEA,tRNA (guanosine-2'-O-)-methyltransferase activity|0009020||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200083.1;locus_tag=LU631_RS01740;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_016191357.1;transl_table=11 NZ_CP089940.1 RefSeq gene 354556 356637 . + . ID=gene-LU631_RS01745;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=LU631_RS01745;old_locus_tag=LU631_01745 NZ_CP089940.1 Protein Homology CDS 354556 356637 . + 0 ID=cds-WP_016191356.1;Parent=gene-LU631_RS01745;Dbxref=Genbank:WP_016191356.1;Name=WP_016191356.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010672104.1;locus_tag=LU631_RS01745;product=ATP-dependent DNA helicase RecG;protein_id=WP_016191356.1;transl_table=11 NZ_CP089940.1 RefSeq gene 356810 358183 . + . ID=gene-LU631_RS01750;Name=LU631_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01750;old_locus_tag=LU631_01750 NZ_CP089940.1 Protein Homology CDS 356810 358183 . + 0 ID=cds-WP_016191355.1;Parent=gene-LU631_RS01750;Dbxref=Genbank:WP_016191355.1;Name=WP_016191355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200080.1;locus_tag=LU631_RS01750;product=uracil-xanthine permease family protein;protein_id=WP_016191355.1;transl_table=11 NZ_CP089940.1 RefSeq gene 358303 359985 . + . ID=gene-LU631_RS01755;Name=LU631_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01755;old_locus_tag=LU631_01755 NZ_CP089940.1 Protein Homology CDS 358303 359985 . + 0 ID=cds-WP_016191354.1;Parent=gene-LU631_RS01755;Dbxref=Genbank:WP_016191354.1;Name=WP_016191354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154759.1;locus_tag=LU631_RS01755;product=AsmA family protein;protein_id=WP_016191354.1;transl_table=11 NZ_CP089940.1 RefSeq gene 360024 360890 . + . ID=gene-LU631_RS01760;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=LU631_RS01760;old_locus_tag=LU631_01760 NZ_CP089940.1 Protein Homology CDS 360024 360890 . + 0 ID=cds-WP_016191353.1;Parent=gene-LU631_RS01760;Dbxref=Genbank:WP_016191353.1;Name=WP_016191353.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511642.1;locus_tag=LU631_RS01760;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_016191353.1;transl_table=11 NZ_CP089940.1 RefSeq gene 360903 361841 . - . ID=gene-LU631_RS01765;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=LU631_RS01765;old_locus_tag=LU631_01765 NZ_CP089940.1 Protein Homology CDS 360903 361841 . - 0 ID=cds-WP_016191352.1;Parent=gene-LU631_RS01765;Dbxref=Genbank:WP_016191352.1;Name=WP_016191352.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542874.1;locus_tag=LU631_RS01765;product=fatty acid biosynthesis protein FabY;protein_id=WP_016191352.1;transl_table=11 NZ_CP089940.1 RefSeq gene 361898 362335 . - . ID=gene-LU631_RS01770;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=LU631_RS01770;old_locus_tag=LU631_01770 NZ_CP089940.1 Protein Homology CDS 361898 362335 . - 0 ID=cds-WP_016191351.1;Parent=gene-LU631_RS01770;Dbxref=Genbank:WP_016191351.1;Name=WP_016191351.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147545.1;locus_tag=LU631_RS01770;product=D-aminoacyl-tRNA deacylase;protein_id=WP_016191351.1;transl_table=11 NZ_CP089940.1 RefSeq gene 362332 363207 . - . ID=gene-LU631_RS01775;Name=LU631_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01775;old_locus_tag=LU631_01775 NZ_CP089940.1 Protein Homology CDS 362332 363207 . - 0 ID=cds-WP_016191350.1;Parent=gene-LU631_RS01775;Dbxref=Genbank:WP_016191350.1;Name=WP_016191350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359530.1;locus_tag=LU631_RS01775;product=virulence factor BrkB family protein;protein_id=WP_016191350.1;transl_table=11 NZ_CP089940.1 RefSeq gene 363207 363803 . - . ID=gene-LU631_RS01780;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=LU631_RS01780;old_locus_tag=LU631_01780 NZ_CP089940.1 Protein Homology CDS 363207 363803 . - 0 ID=cds-WP_016191349.1;Parent=gene-LU631_RS01780;Dbxref=Genbank:WP_016191349.1;Name=WP_016191349.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017801613.1;locus_tag=LU631_RS01780;product=glucose-1-phosphatase;protein_id=WP_016191349.1;transl_table=11 NZ_CP089940.1 RefSeq gene 363956 365779 . - . ID=gene-LU631_RS01785;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=LU631_RS01785;old_locus_tag=LU631_01785 NZ_CP089940.1 Protein Homology CDS 363956 365779 . - 0 ID=cds-WP_016191348.1;Parent=gene-LU631_RS01785;Dbxref=Genbank:WP_016191348.1;Name=WP_016191348.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966559.1;locus_tag=LU631_RS01785;product=ribosome-dependent GTPase TypA;protein_id=WP_016191348.1;transl_table=11 NZ_CP089940.1 RefSeq gene 365962 367284 . + . ID=gene-LU631_RS01790;Name=LU631_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01790;old_locus_tag=LU631_01790 NZ_CP089940.1 Protein Homology CDS 365962 367284 . + 0 ID=cds-WP_046371900.1-2;Parent=gene-LU631_RS01790;Dbxref=Genbank:WP_046371900.1;Name=WP_046371900.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS01790;product=IS4 family transposase;protein_id=WP_046371900.1;transl_table=11 NZ_CP089940.1 RefSeq gene 367647 369056 . + . ID=gene-LU631_RS01795;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=LU631_RS01795;old_locus_tag=LU631_01795 NZ_CP089940.1 Protein Homology CDS 367647 369056 . + 0 ID=cds-WP_016191347.1;Parent=gene-LU631_RS01795;Dbxref=Genbank:WP_016191347.1;Name=WP_016191347.1;Ontology_term=GO:0006542,GO:0006807,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462887.1;locus_tag=LU631_RS01795;product=glutamate--ammonia ligase;protein_id=WP_016191347.1;transl_table=11 NZ_CP089940.1 RefSeq gene 369243 370292 . + . ID=gene-LU631_RS01800;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=LU631_RS01800;old_locus_tag=LU631_01800 NZ_CP089940.1 Protein Homology CDS 369243 370292 . + 0 ID=cds-WP_016191345.1;Parent=gene-LU631_RS01800;Dbxref=Genbank:WP_016191345.1;Name=WP_016191345.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=LU631_RS01800;product=nitrogen regulation protein NR(II);protein_id=WP_016191345.1;transl_table=11 NZ_CP089940.1 RefSeq gene 370300 371709 . + . ID=gene-LU631_RS01805;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=LU631_RS01805;old_locus_tag=LU631_01805 NZ_CP089940.1 Protein Homology CDS 370300 371709 . + 0 ID=cds-WP_016191344.1;Parent=gene-LU631_RS01805;Dbxref=Genbank:WP_016191344.1;Name=WP_016191344.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=LU631_RS01805;product=nitrogen regulation protein NR(I);protein_id=WP_016191344.1;transl_table=11 NZ_CP089940.1 RefSeq gene 371810 371923 . + . ID=gene-LU631_RS01810;Name=LU631_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01810;old_locus_tag=LU631_01810 NZ_CP089940.1 Protein Homology CDS 371810 371923 . + 0 ID=cds-WP_152664229.1;Parent=gene-LU631_RS01810;Dbxref=Genbank:WP_152664229.1;Name=WP_152664229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007872049.1;locus_tag=LU631_RS01810;product=YshB family small membrane protein;protein_id=WP_152664229.1;transl_table=11 NZ_CP089940.1 RefSeq gene 372251 372460 . - . ID=gene-LU631_RS01815;Name=LU631_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01815;old_locus_tag=LU631_01815 NZ_CP089940.1 GeneMarkS-2+ CDS 372251 372460 . - 0 ID=cds-WP_152664230.1;Parent=gene-LU631_RS01815;Dbxref=Genbank:WP_152664230.1;Name=WP_152664230.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS01815;product=hypothetical protein;protein_id=WP_152664230.1;transl_table=11 NZ_CP089940.1 RefSeq gene 372604 374232 . - . ID=gene-LU631_RS01820;Name=LU631_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01820;old_locus_tag=LU631_01820 NZ_CP089940.1 Protein Homology CDS 372604 374232 . - 0 ID=cds-WP_016191343.1;Parent=gene-LU631_RS01820;Dbxref=Genbank:WP_016191343.1;Name=WP_016191343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012016880.1;locus_tag=LU631_RS01820;product=ABC transporter substrate-binding protein;protein_id=WP_016191343.1;transl_table=11 NZ_CP089940.1 RefSeq gene 374456 375811 . - . ID=gene-LU631_RS01825;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=LU631_RS01825;old_locus_tag=LU631_01825 NZ_CP089940.1 Protein Homology CDS 374456 375811 . - 0 ID=cds-WP_016191342.1;Parent=gene-LU631_RS01825;Dbxref=Genbank:WP_016191342.1;Name=WP_016191342.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemN;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015842304.1;locus_tag=LU631_RS01825;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_016191342.1;transl_table=11 NZ_CP089940.1 RefSeq gene 376075 376596 . - . ID=gene-LU631_RS01830;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=LU631_RS01830;old_locus_tag=LU631_01830 NZ_CP089940.1 Protein Homology CDS 376075 376596 . - 0 ID=cds-WP_016191341.1;Parent=gene-LU631_RS01830;Dbxref=Genbank:WP_016191341.1;Name=WP_016191341.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154746.1;locus_tag=LU631_RS01830;product=Der GTPase-activating protein YihI;protein_id=WP_016191341.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 377261 378316 . + . ID=gene-LU631_RS01835;Name=LU631_RS01835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01835;old_locus_tag=LU631_01835;pseudo=true NZ_CP089940.1 Protein Homology CDS 377261 378316 . + 0 ID=cds-LU631_RS01835;Parent=gene-LU631_RS01835;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS01835;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 378366 378765 . - . ID=gene-LU631_RS01840;Name=LU631_RS01840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01840;old_locus_tag=LU631_01840;partial=true;pseudo=true;start_range=.,378366 NZ_CP089940.1 Protein Homology CDS 378366 378765 . - 0 ID=cds-LU631_RS01840;Parent=gene-LU631_RS01840;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS01840;partial=true;product=transposase;pseudo=true;start_range=.,378366;transl_table=11 NZ_CP089940.1 RefSeq gene 379185 381773 . - . ID=gene-LU631_RS01845;Name=LU631_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01845;old_locus_tag=LU631_01845 NZ_CP089940.1 Protein Homology CDS 379185 381773 . - 0 ID=cds-WP_232426874.1;Parent=gene-LU631_RS01845;Dbxref=Genbank:WP_232426874.1;Name=WP_232426874.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023351.2;locus_tag=LU631_RS01845;product=inverse autotransporter beta domain-containing protein;protein_id=WP_232426874.1;transl_table=11 NZ_CP089940.1 RefSeq gene 381730 382326 . - . ID=gene-LU631_RS01850;Name=LU631_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01850;old_locus_tag=LU631_01850 NZ_CP089940.1 GeneMarkS-2+ CDS 381730 382326 . - 0 ID=cds-WP_232426873.1;Parent=gene-LU631_RS01850;Dbxref=Genbank:WP_232426873.1;Name=WP_232426873.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS01850;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_232426873.1;transl_table=11 NZ_CP089940.1 RefSeq gene 382420 382689 . - . ID=gene-LU631_RS01855;Name=LU631_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01855;old_locus_tag=LU631_01855 NZ_CP089940.1 GeneMarkS-2+ CDS 382420 382689 . - 0 ID=cds-WP_046372134.1;Parent=gene-LU631_RS01855;Dbxref=Genbank:WP_046372134.1;Name=WP_046372134.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS01855;product=hypothetical protein;protein_id=WP_046372134.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 382798 383088 . + . ID=gene-LU631_RS01860;Name=LU631_RS01860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01860;old_locus_tag=LU631_01860;partial=true;pseudo=true;start_range=.,382798 NZ_CP089940.1 Protein Homology CDS 382798 383088 . + 0 ID=cds-LU631_RS01860;Parent=gene-LU631_RS01860;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU631_RS01860;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,382798;transl_table=11 NZ_CP089940.1 RefSeq gene 383388 383882 . + . ID=gene-LU631_RS01865;Name=LU631_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01865;old_locus_tag=LU631_01865 NZ_CP089940.1 Protein Homology CDS 383388 383882 . + 0 ID=cds-WP_232426872.1;Parent=gene-LU631_RS01865;Dbxref=Genbank:WP_232426872.1;Name=WP_232426872.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022590.2;locus_tag=LU631_RS01865;product=DUF2913 family protein;protein_id=WP_232426872.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 384010 384225 . - . ID=gene-LU631_RS01870;Name=LU631_RS01870;end_range=384225,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01870;old_locus_tag=LU631_01870;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 384010 384225 . - 0 ID=cds-LU631_RS01870;Parent=gene-LU631_RS01870;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=384225,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=LU631_RS01870;partial=true;product=ISNCY family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 384532 385652 . + . ID=gene-LU631_RS01875;Name=LU631_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01875;old_locus_tag=LU631_01875 NZ_CP089940.1 Protein Homology CDS 384532 384790 . + 0 ID=cds-WP_152664232.1;Parent=gene-LU631_RS01875;Dbxref=Genbank:WP_152664232.1;Name=WP_152664232.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS01875;product=IS3 family transposase;protein_id=WP_152664232.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 384790 385652 . + 2 ID=cds-WP_152664232.1;Parent=gene-LU631_RS01875;Dbxref=Genbank:WP_152664232.1;Name=WP_152664232.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS01875;product=IS3 family transposase;protein_id=WP_152664232.1;transl_table=11 NZ_CP089940.1 RefSeq gene 385645 386049 . - . ID=gene-LU631_RS01880;Name=LU631_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01880;old_locus_tag=LU631_01880 NZ_CP089940.1 Protein Homology CDS 385645 386049 . - 0 ID=cds-WP_233482020.1;Parent=gene-LU631_RS01880;Dbxref=Genbank:WP_233482020.1;Name=WP_233482020.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024750.2;locus_tag=LU631_RS01880;product=hypothetical protein;protein_id=WP_233482020.1;transl_table=11 NZ_CP089940.1 RefSeq gene 385950 386231 . - . ID=gene-LU631_RS01885;Name=LU631_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01885;old_locus_tag=LU631_01885 NZ_CP089940.1 GeneMarkS-2+ CDS 385950 386231 . - 0 ID=cds-WP_016191330.1;Parent=gene-LU631_RS01885;Dbxref=Genbank:WP_016191330.1;Name=WP_016191330.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS01885;product=Arm DNA-binding domain-containing protein;protein_id=WP_016191330.1;transl_table=11 NZ_CP089940.1 RefSeq gene 386583 387062 . - . ID=gene-LU631_RS01890;Name=LU631_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01890;old_locus_tag=LU631_01890 NZ_CP089940.1 Protein Homology CDS 386583 387062 . - 0 ID=cds-WP_016191329.1;Parent=gene-LU631_RS01890;Dbxref=Genbank:WP_016191329.1;Name=WP_016191329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105390.1;locus_tag=LU631_RS01890;product=DUF943 family protein;protein_id=WP_016191329.1;transl_table=11 NZ_CP089940.1 RefSeq gene 387062 387874 . - . ID=gene-LU631_RS01895;Name=LU631_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01895;old_locus_tag=LU631_01895 NZ_CP089940.1 Protein Homology CDS 387062 387874 . - 0 ID=cds-WP_016191328.1;Parent=gene-LU631_RS01895;Dbxref=Genbank:WP_016191328.1;Name=WP_016191328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851338.1;locus_tag=LU631_RS01895;product=DUF3289 family protein;protein_id=WP_016191328.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 388259 388348 . - . ID=gene-LU631_RS01900;Name=LU631_RS01900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS01900;old_locus_tag=LU631_01900;partial=true;pseudo=true;start_range=.,388259 NZ_CP089940.1 Protein Homology CDS 388259 388348 . - 0 ID=cds-LU631_RS01900;Parent=gene-LU631_RS01900;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611588.1;locus_tag=LU631_RS01900;partial=true;product=transposase;pseudo=true;start_range=.,388259;transl_table=11 NZ_CP089940.1 RefSeq gene 388660 389523 . - . ID=gene-LU631_RS01905;Name=LU631_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01905;old_locus_tag=LU631_01905 NZ_CP089940.1 Protein Homology CDS 388660 389523 . - 0 ID=cds-WP_016191326.1;Parent=gene-LU631_RS01905;Dbxref=Genbank:WP_016191326.1;Name=WP_016191326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=LU631_RS01905;product=YicC family protein;protein_id=WP_016191326.1;transl_table=11 NZ_CP089940.1 RefSeq gene 389958 391673 . + . ID=gene-LU631_RS01910;Name=LU631_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01910;old_locus_tag=LU631_01910 NZ_CP089940.1 Protein Homology CDS 389958 391673 . + 0 ID=cds-WP_016191325.1;Parent=gene-LU631_RS01910;Dbxref=Genbank:WP_016191325.1;Name=WP_016191325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015344250.1;locus_tag=LU631_RS01910;product=lysophospholipid acyltransferase family protein;protein_id=WP_016191325.1;transl_table=11 NZ_CP089940.1 RefSeq gene 391868 392677 . + . ID=gene-LU631_RS01915;Name=LU631_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01915;old_locus_tag=LU631_01915 NZ_CP089940.1 Protein Homology CDS 391868 392677 . + 0 ID=cds-WP_016191324.1;Parent=gene-LU631_RS01915;Dbxref=Genbank:WP_016191324.1;Name=WP_016191324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004216993.1;locus_tag=LU631_RS01915;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_016191324.1;transl_table=11 NZ_CP089940.1 RefSeq gene 392658 393569 . + . ID=gene-LU631_RS01920;Name=LU631_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01920;old_locus_tag=LU631_01920 NZ_CP089940.1 Protein Homology CDS 392658 393569 . + 0 ID=cds-WP_016191323.1;Parent=gene-LU631_RS01920;Dbxref=Genbank:WP_016191323.1;Name=WP_016191323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007370281.1;locus_tag=LU631_RS01920;product=ABC transporter ATP-binding protein;protein_id=WP_016191323.1;transl_table=11 NZ_CP089940.1 RefSeq gene 393595 394686 . + . ID=gene-LU631_RS01925;Name=LU631_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01925;old_locus_tag=LU631_01925 NZ_CP089940.1 Protein Homology CDS 393595 394686 . + 0 ID=cds-WP_161797002.1;Parent=gene-LU631_RS01925;Dbxref=Genbank:WP_161797002.1;Name=WP_161797002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229447.1;locus_tag=LU631_RS01925;product=ABC transporter permease;protein_id=WP_161797002.1;transl_table=11 NZ_CP089940.1 RefSeq gene 394821 395063 . + . ID=gene-LU631_RS01930;Name=LU631_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01930;old_locus_tag=LU631_01930 NZ_CP089940.1 GeneMarkS-2+ CDS 394821 395063 . + 0 ID=cds-WP_016191321.1;Parent=gene-LU631_RS01930;Dbxref=Genbank:WP_016191321.1;Name=WP_016191321.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS01930;product=hypothetical protein;protein_id=WP_016191321.1;transl_table=11 NZ_CP089940.1 RefSeq gene 395120 395836 . + . ID=gene-LU631_RS01935;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=LU631_RS01935;old_locus_tag=LU631_01935 NZ_CP089940.1 Protein Homology CDS 395120 395836 . + 0 ID=cds-WP_016191320.1;Parent=gene-LU631_RS01935;Dbxref=Genbank:WP_016191320.1;Name=WP_016191320.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462634.1;locus_tag=LU631_RS01935;product=ribonuclease PH;protein_id=WP_016191320.1;transl_table=11 NZ_CP089940.1 RefSeq gene 395890 396531 . + . ID=gene-LU631_RS01940;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=LU631_RS01940;old_locus_tag=LU631_01940 NZ_CP089940.1 Protein Homology CDS 395890 396531 . + 0 ID=cds-WP_016191319.1;Parent=gene-LU631_RS01940;Dbxref=Genbank:WP_016191319.1;Name=WP_016191319.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=LU631_RS01940;product=orotate phosphoribosyltransferase;protein_id=WP_016191319.1;transl_table=11 NZ_CP089940.1 RefSeq gene 396562 397158 . - . ID=gene-LU631_RS01945;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=LU631_RS01945;old_locus_tag=LU631_01945 NZ_CP089940.1 Protein Homology CDS 396562 397158 . - 0 ID=cds-WP_016191318.1;Parent=gene-LU631_RS01945;Dbxref=Genbank:WP_016191318.1;Name=WP_016191318.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017348857.1;locus_tag=LU631_RS01945;product=nucleoid occlusion factor SlmA;protein_id=WP_016191318.1;transl_table=11 NZ_CP089940.1 RefSeq gene 397276 397734 . - . ID=gene-LU631_RS01950;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=LU631_RS01950;old_locus_tag=LU631_01950 NZ_CP089940.1 Protein Homology CDS 397276 397734 . - 0 ID=cds-WP_040465595.1;Parent=gene-LU631_RS01950;Dbxref=Genbank:WP_040465595.1;Name=WP_040465595.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=LU631_RS01950;product=dUTP diphosphatase;protein_id=WP_040465595.1;transl_table=11 NZ_CP089940.1 RefSeq gene 397712 398926 . - . ID=gene-LU631_RS01955;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=LU631_RS01955;old_locus_tag=LU631_01955 NZ_CP089940.1 Protein Homology CDS 397712 398926 . - 0 ID=cds-WP_016191316.1;Parent=gene-LU631_RS01955;Dbxref=Genbank:WP_016191316.1;Name=WP_016191316.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666466.1;locus_tag=LU631_RS01955;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_016191316.1;transl_table=11 NZ_CP089940.1 RefSeq gene 399109 400329 . - . ID=gene-LU631_RS01960;Name=LU631_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01960;old_locus_tag=LU631_01960 NZ_CP089940.1 Protein Homology CDS 399109 400329 . - 0 ID=cds-WP_046371929.1;Parent=gene-LU631_RS01960;Dbxref=Genbank:WP_046371929.1;Name=WP_046371929.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343765.1;locus_tag=LU631_RS01960;product=ISL3 family transposase;protein_id=WP_046371929.1;transl_table=11 NZ_CP089940.1 RefSeq gene 400363 401070 . - . ID=gene-LU631_RS01965;Name=LU631_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01965;old_locus_tag=LU631_01965 NZ_CP089940.1 Protein Homology CDS 400363 401070 . - 0 ID=cds-WP_046372137.1;Parent=gene-LU631_RS01965;Dbxref=Genbank:WP_046372137.1;Name=WP_046372137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308877.1;locus_tag=LU631_RS01965;product=M91 family zinc metallopeptidase;protein_id=WP_046372137.1;transl_table=11 NZ_CP089940.1 RefSeq gene 401194 401877 . + . ID=gene-LU631_RS01970;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=LU631_RS01970;old_locus_tag=LU631_01970 NZ_CP089940.1 Protein Homology CDS 401194 401877 . + 0 ID=cds-WP_016191315.1;Parent=gene-LU631_RS01970;Dbxref=Genbank:WP_016191315.1;Name=WP_016191315.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154797.1;locus_tag=LU631_RS01970;product=DNA repair protein RadC;protein_id=WP_016191315.1;transl_table=11 NZ_CP089940.1 RefSeq gene 402137 402373 . + . ID=gene-LU631_RS01975;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=LU631_RS01975;old_locus_tag=LU631_01975 NZ_CP089940.1 Protein Homology CDS 402137 402373 . + 0 ID=cds-WP_016191314.1;Parent=gene-LU631_RS01975;Dbxref=Genbank:WP_016191314.1;Name=WP_016191314.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=LU631_RS01975;product=50S ribosomal protein L28;protein_id=WP_016191314.1;transl_table=11 NZ_CP089940.1 RefSeq gene 402390 402557 . + . ID=gene-LU631_RS01980;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LU631_RS01980;old_locus_tag=LU631_01980 NZ_CP089940.1 Protein Homology CDS 402390 402557 . + 0 ID=cds-WP_013094893.1;Parent=gene-LU631_RS01980;Dbxref=Genbank:WP_013094893.1;Name=WP_013094893.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=LU631_RS01980;product=50S ribosomal protein L33;protein_id=WP_013094893.1;transl_table=11 NZ_CP089940.1 RefSeq gene 402635 403444 . + . ID=gene-LU631_RS01985;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=LU631_RS01985;old_locus_tag=LU631_01985 NZ_CP089940.1 Protein Homology CDS 402635 403444 . + 0 ID=cds-WP_016191313.1;Parent=gene-LU631_RS01985;Dbxref=Genbank:WP_016191313.1;Name=WP_016191313.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312537.1;locus_tag=LU631_RS01985;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_016191313.1;transl_table=11 NZ_CP089940.1 RefSeq gene 403464 403940 . - . ID=gene-LU631_RS01990;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=LU631_RS01990;old_locus_tag=LU631_01990 NZ_CP089940.1 Protein Homology CDS 403464 403940 . - 0 ID=cds-WP_016191312.1;Parent=gene-LU631_RS01990;Dbxref=Genbank:WP_016191312.1;Name=WP_016191312.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439842.1;locus_tag=LU631_RS01990;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_016191312.1;transl_table=11 NZ_CP089940.1 RefSeq gene 403937 404722 . - . ID=gene-LU631_RS01995;Name=LU631_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS01995;old_locus_tag=LU631_01995 NZ_CP089940.1 Protein Homology CDS 403937 404722 . - 0 ID=cds-WP_016191311.1;Parent=gene-LU631_RS01995;Dbxref=Genbank:WP_016191311.1;Name=WP_016191311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200104.1;locus_tag=LU631_RS01995;product=glycosyltransferase family 2 protein;protein_id=WP_016191311.1;transl_table=11 NZ_CP089940.1 RefSeq gene 404723 405997 . - . ID=gene-LU631_RS02000;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=LU631_RS02000;old_locus_tag=LU631_02000 NZ_CP089940.1 Protein Homology CDS 404723 405997 . - 0 ID=cds-WP_016191310.1;Parent=gene-LU631_RS02000;Dbxref=Genbank:WP_016191310.1;Name=WP_016191310.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455749.1;locus_tag=LU631_RS02000;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_016191310.1;transl_table=11 NZ_CP089940.1 RefSeq gene 406100 407233 . - . ID=gene-LU631_RS02005;Name=LU631_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02005;old_locus_tag=LU631_02005 NZ_CP089940.1 Protein Homology CDS 406100 407233 . - 0 ID=cds-WP_016191309.1;Parent=gene-LU631_RS02005;Dbxref=Genbank:WP_016191309.1;Name=WP_016191309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200106.1;locus_tag=LU631_RS02005;product=glycosyltransferase family 4 protein;protein_id=WP_016191309.1;transl_table=11 NZ_CP089940.1 RefSeq gene 407226 408317 . - . ID=gene-LU631_RS02010;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=LU631_RS02010;old_locus_tag=LU631_02010 NZ_CP089940.1 Protein Homology CDS 407226 408317 . - 0 ID=cds-WP_152664234.1;Parent=gene-LU631_RS02010;Dbxref=Genbank:WP_152664234.1;Name=WP_152664234.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200107.1;locus_tag=LU631_RS02010;product=putative lipopolysaccharide heptosyltransferase III;protein_id=WP_152664234.1;transl_table=11 NZ_CP089940.1 RefSeq gene 408645 409724 . - . ID=gene-LU631_RS02015;Name=LU631_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02015;old_locus_tag=LU631_02015 NZ_CP089940.1 Protein Homology CDS 408645 409724 . - 0 ID=cds-WP_016191307.1;Parent=gene-LU631_RS02015;Dbxref=Genbank:WP_016191307.1;Name=WP_016191307.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013257.2;locus_tag=LU631_RS02015;product=glycosyltransferase family 9 protein;protein_id=WP_016191307.1;transl_table=11 NZ_CP089940.1 RefSeq gene 409925 411070 . - . ID=gene-LU631_RS02020;Name=LU631_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02020;old_locus_tag=LU631_02020 NZ_CP089940.1 Protein Homology CDS 409925 411070 . - 0 ID=cds-WP_232426871.1;Parent=gene-LU631_RS02020;Dbxref=Genbank:WP_232426871.1;Name=WP_232426871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200110.1;locus_tag=LU631_RS02020;product=glycosyltransferase;protein_id=WP_232426871.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 411346 412323 . + . ID=gene-LU631_RS02025;Name=LU631_RS02025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS02025;old_locus_tag=LU631_02025;pseudo=true NZ_CP089940.1 Protein Homology CDS 411346 412323 . + 0 ID=cds-LU631_RS02025;Parent=gene-LU631_RS02025;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200111.1;locus_tag=LU631_RS02025;product=deacetylase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 412366 413283 . - . ID=gene-LU631_RS02030;Name=LU631_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02030;old_locus_tag=LU631_02030 NZ_CP089940.1 Protein Homology CDS 412366 413283 . - 0 ID=cds-WP_016191303.1;Parent=gene-LU631_RS02030;Dbxref=Genbank:WP_016191303.1;Name=WP_016191303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200113.1;locus_tag=LU631_RS02030;product=glycosyltransferase family 2 protein;protein_id=WP_016191303.1;transl_table=11 NZ_CP089940.1 RefSeq gene 413290 414264 . - . ID=gene-LU631_RS02035;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=LU631_RS02035;old_locus_tag=LU631_02035 NZ_CP089940.1 Protein Homology CDS 413290 414264 . - 0 ID=cds-WP_016191302.1;Parent=gene-LU631_RS02035;Dbxref=Genbank:WP_016191302.1;Name=WP_016191302.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511017.1;locus_tag=LU631_RS02035;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_016191302.1;transl_table=11 NZ_CP089940.1 RefSeq gene 414252 415313 . - . ID=gene-LU631_RS02040;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=LU631_RS02040;old_locus_tag=LU631_02040 NZ_CP089940.1 Protein Homology CDS 414252 415313 . - 0 ID=cds-WP_016191301.1;Parent=gene-LU631_RS02040;Dbxref=Genbank:WP_016191301.1;Name=WP_016191301.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013027723.1;locus_tag=LU631_RS02040;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_016191301.1;transl_table=11 NZ_CP089940.1 RefSeq gene 415329 416261 . - . ID=gene-LU631_RS02045;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=LU631_RS02045;old_locus_tag=LU631_02045 NZ_CP089940.1 Protein Homology CDS 415329 416261 . - 0 ID=cds-WP_016191300.1;Parent=gene-LU631_RS02045;Dbxref=Genbank:WP_016191300.1;Name=WP_016191300.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121268.1;locus_tag=LU631_RS02045;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_016191300.1;transl_table=11 NZ_CP089940.1 RefSeq gene 416382 417293 . - . ID=gene-LU631_RS02050;Name=LU631_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02050;old_locus_tag=LU631_02050 NZ_CP089940.1 Protein Homology CDS 416382 417293 . - 0 ID=cds-WP_016191299.1;Parent=gene-LU631_RS02050;Dbxref=Genbank:WP_016191299.1;Name=WP_016191299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882674.1;locus_tag=LU631_RS02050;product=hypothetical protein;protein_id=WP_016191299.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 417346 418520 . - . ID=gene-LU631_RS02055;Name=LU631_RS02055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS02055;old_locus_tag=LU631_02055;pseudo=true NZ_CP089940.1 Protein Homology CDS 417346 418520 . - 0 ID=cds-LU631_RS02055;Parent=gene-LU631_RS02055;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200120.1;locus_tag=LU631_RS02055;product=glycosyltransferase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 418572 419507 . - . ID=gene-LU631_RS02060;Name=LU631_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02060;old_locus_tag=LU631_02060 NZ_CP089940.1 Protein Homology CDS 418572 419507 . - 0 ID=cds-WP_040465594.1;Parent=gene-LU631_RS02060;Dbxref=Genbank:WP_040465594.1;Name=WP_040465594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200121.1;locus_tag=LU631_RS02060;product=divergent polysaccharide deacetylase family protein;protein_id=WP_040465594.1;transl_table=11 NZ_CP089940.1 RefSeq gene 419510 420808 . - . ID=gene-LU631_RS02065;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=LU631_RS02065;old_locus_tag=LU631_02065 NZ_CP089940.1 Protein Homology CDS 419510 420808 . - 0 ID=cds-WP_016191297.1;Parent=gene-LU631_RS02065;Dbxref=Genbank:WP_016191297.1;Name=WP_016191297.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007885324.1;locus_tag=LU631_RS02065;product=murein hydrolase activator EnvC;protein_id=WP_016191297.1;transl_table=11 NZ_CP089940.1 RefSeq gene 421130 421561 . + . ID=gene-LU631_RS02070;Name=LU631_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02070;old_locus_tag=LU631_02070 NZ_CP089940.1 Protein Homology CDS 421130 421561 . + 0 ID=cds-WP_016191296.1;Parent=gene-LU631_RS02070;Dbxref=Genbank:WP_016191296.1;Name=WP_016191296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511012.1;locus_tag=LU631_RS02070;product=rhodanese-like domain-containing protein;protein_id=WP_016191296.1;transl_table=11 NZ_CP089940.1 RefSeq gene 421580 421831 . + . ID=gene-LU631_RS02075;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=LU631_RS02075;old_locus_tag=LU631_02075 NZ_CP089940.1 Protein Homology CDS 421580 421831 . + 0 ID=cds-WP_016191295.1;Parent=gene-LU631_RS02075;Dbxref=Genbank:WP_016191295.1;Name=WP_016191295.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=LU631_RS02075;product=glutaredoxin 3;protein_id=WP_016191295.1;transl_table=11 NZ_CP089940.1 RefSeq gene 421874 422341 . + . ID=gene-LU631_RS02080;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=LU631_RS02080;old_locus_tag=LU631_02080 NZ_CP089940.1 Protein Homology CDS 421874 422341 . + 0 ID=cds-WP_016191294.1;Parent=gene-LU631_RS02080;Dbxref=Genbank:WP_016191294.1;Name=WP_016191294.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462601.1;locus_tag=LU631_RS02080;product=protein-export chaperone SecB;protein_id=WP_016191294.1;transl_table=11 NZ_CP089940.1 RefSeq gene 422341 423360 . + . ID=gene-LU631_RS02085;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=LU631_RS02085;old_locus_tag=LU631_02085 NZ_CP089940.1 Protein Homology CDS 422341 423360 . + 0 ID=cds-WP_016191293.1;Parent=gene-LU631_RS02085;Dbxref=Genbank:WP_016191293.1;Name=WP_016191293.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167822.1;locus_tag=LU631_RS02085;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_016191293.1;transl_table=11 NZ_CP089940.1 RefSeq gene 423426 424247 . + . ID=gene-LU631_RS02090;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=LU631_RS02090;old_locus_tag=LU631_02090 NZ_CP089940.1 Protein Homology CDS 423426 424247 . + 0 ID=cds-WP_016191292.1;Parent=gene-LU631_RS02090;Dbxref=Genbank:WP_016191292.1;Name=WP_016191292.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=LU631_RS02090;product=serine O-acetyltransferase;protein_id=WP_016191292.1;transl_table=11 NZ_CP089940.1 RefSeq gene 424244 424720 . - . ID=gene-LU631_RS02095;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=LU631_RS02095;old_locus_tag=LU631_02095 NZ_CP089940.1 Protein Homology CDS 424244 424720 . - 0 ID=cds-WP_016191291.1;Parent=gene-LU631_RS02095;Dbxref=Genbank:WP_016191291.1;Name=WP_016191291.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094923.1;locus_tag=LU631_RS02095;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_016191291.1;transl_table=11 NZ_CP089940.1 RefSeq gene 424763 426139 . - . ID=gene-LU631_RS02100;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=LU631_RS02100;old_locus_tag=LU631_02100 NZ_CP089940.1 Protein Homology CDS 424763 426139 . - 0 ID=cds-WP_016191290.1;Parent=gene-LU631_RS02100;Dbxref=Genbank:WP_016191290.1;Name=WP_016191290.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200128.1;locus_tag=LU631_RS02100;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_016191290.1;transl_table=11 NZ_CP089940.1 RefSeq gene 426136 426831 . - . ID=gene-LU631_RS02105;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=LU631_RS02105;old_locus_tag=LU631_02105 NZ_CP089940.1 Protein Homology CDS 426136 426831 . - 0 ID=cds-WP_016191289.1;Parent=gene-LU631_RS02105;Dbxref=Genbank:WP_016191289.1;Name=WP_016191289.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312865.1;locus_tag=LU631_RS02105;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_016191289.1;transl_table=11 NZ_CP089940.1 RefSeq gene 426983 427483 . + . ID=gene-LU631_RS02110;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=LU631_RS02110;old_locus_tag=LU631_02110 NZ_CP089940.1 Protein Homology CDS 426983 427483 . + 0 ID=cds-WP_016191288.1;Parent=gene-LU631_RS02110;Dbxref=Genbank:WP_016191288.1;Name=WP_016191288.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007885340.1;locus_tag=LU631_RS02110;product=cell-envelope stress modulator CpxP;protein_id=WP_016191288.1;transl_table=11 NZ_CP089940.1 RefSeq gene 427811 428704 . + . ID=gene-LU631_RS02115;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=LU631_RS02115;old_locus_tag=LU631_02115 NZ_CP089940.1 Protein Homology CDS 427811 428704 . + 0 ID=cds-WP_016191286.1;Parent=gene-LU631_RS02115;Dbxref=Genbank:WP_016191286.1;Name=WP_016191286.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208967.1;locus_tag=LU631_RS02115;product=CDF family cation-efflux transporter FieF;protein_id=WP_016191286.1;transl_table=11 NZ_CP089940.1 RefSeq gene 428917 429879 . + . ID=gene-LU631_RS02120;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=LU631_RS02120;old_locus_tag=LU631_02120 NZ_CP089940.1 Protein Homology CDS 428917 429879 . + 0 ID=cds-WP_016191285.1;Parent=gene-LU631_RS02120;Dbxref=Genbank:WP_016191285.1;Name=WP_016191285.1;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=LU631_RS02120;product=6-phosphofructokinase;protein_id=WP_016191285.1;transl_table=11 NZ_CP089940.1 RefSeq gene 430033 430470 . + . ID=gene-LU631_RS02125;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS02125;old_locus_tag=LU631_02125 NZ_CP089940.1 Protein Homology CDS 430033 430470 . + 0 ID=cds-WP_046372138.1;Parent=gene-LU631_RS02125;Dbxref=Genbank:WP_046372138.1;Name=WP_046372138.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS02125;product=IS200/IS605 family transposase;protein_id=WP_046372138.1;transl_table=11 NZ_CP089940.1 RefSeq gene 430657 431649 . + . ID=gene-LU631_RS02130;Name=LU631_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02130;old_locus_tag=LU631_02130 NZ_CP089940.1 Protein Homology CDS 430657 431649 . + 0 ID=cds-WP_016191284.1;Parent=gene-LU631_RS02130;Dbxref=Genbank:WP_016191284.1;Name=WP_016191284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229474.1;locus_tag=LU631_RS02130;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_016191284.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 431751 432651 . + . ID=gene-LU631_RS02135;Name=LU631_RS02135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS02135;old_locus_tag=LU631_02135;pseudo=true NZ_CP089940.1 Protein Homology CDS 431751 432651 . + 0 ID=cds-LU631_RS02135;Parent=gene-LU631_RS02135;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS02135;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 432737 433495 . + . ID=gene-LU631_RS02140;Name=LU631_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02140;old_locus_tag=LU631_02140 NZ_CP089940.1 Protein Homology CDS 432737 433495 . + 0 ID=cds-WP_016191282.1;Parent=gene-LU631_RS02140;Dbxref=Genbank:WP_016191282.1;Name=WP_016191282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200171.1;locus_tag=LU631_RS02140;product=CDP-diacylglycerol diphosphatase;protein_id=WP_016191282.1;transl_table=11 NZ_CP089940.1 RefSeq gene 433490 434503 . - . ID=gene-LU631_RS02145;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=LU631_RS02145;old_locus_tag=LU631_02145 NZ_CP089940.1 Protein Homology CDS 433490 434503 . - 0 ID=cds-WP_016191281.1;Parent=gene-LU631_RS02145;Dbxref=Genbank:WP_016191281.1;Name=WP_016191281.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666499.1;locus_tag=LU631_RS02145;product=inner membrane protein YhjD;protein_id=WP_016191281.1;transl_table=11 NZ_CP089940.1 RefSeq gene 434563 435603 . - . ID=gene-LU631_RS02150;Name=LU631_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02150;old_locus_tag=LU631_02150 NZ_CP089940.1 Protein Homology CDS 434563 435603 . - 0 ID=cds-WP_046371813.1-2;Parent=gene-LU631_RS02150;Dbxref=Genbank:WP_046371813.1;Name=WP_046371813.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS02150;product=IS481 family transposase;protein_id=WP_046371813.1;transl_table=11 NZ_CP089940.1 RefSeq gene 435745 436113 . - . ID=gene-LU631_RS02155;Name=LU631_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02155;old_locus_tag=LU631_02155 NZ_CP089940.1 Protein Homology CDS 435745 436113 . - 0 ID=cds-WP_016191280.1;Parent=gene-LU631_RS02155;Dbxref=Genbank:WP_016191280.1;Name=WP_016191280.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF014609.2;locus_tag=LU631_RS02155;product=PhzF family phenazine biosynthesis protein;protein_id=WP_016191280.1;transl_table=11 NZ_CP089940.1 RefSeq gene 436298 437496 . - . ID=gene-LU631_RS02160;Name=LU631_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02160;old_locus_tag=LU631_02160 NZ_CP089940.1 Protein Homology CDS 436353 437496 . - 0 ID=cds-WP_233481976.1;Parent=gene-LU631_RS02160;Dbxref=Genbank:WP_233481976.1;Name=WP_233481976.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU631_RS02160;product=IS91 family transposase;protein_id=WP_233481976.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 436298 436353 . - 2 ID=cds-WP_233481976.1;Parent=gene-LU631_RS02160;Dbxref=Genbank:WP_233481976.1;Name=WP_233481976.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU631_RS02160;product=IS91 family transposase;protein_id=WP_233481976.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 437520 437693 . - . ID=gene-LU631_RS02165;Name=LU631_RS02165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS02165;old_locus_tag=LU631_02165;partial=true;pseudo=true;start_range=.,437520 NZ_CP089940.1 Protein Homology CDS 437520 437693 . - 0 ID=cds-LU631_RS02165;Parent=gene-LU631_RS02165;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707455.1;locus_tag=LU631_RS02165;partial=true;product=hypothetical protein;pseudo=true;start_range=.,437520;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 437828 438330 . - . ID=gene-LU631_RS02170;Name=LU631_RS02170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS02170;old_locus_tag=LU631_02170;partial=true;pseudo=true;start_range=.,437828 NZ_CP089940.1 Protein Homology CDS 437828 438330 . - 0 ID=cds-LU631_RS02170;Parent=gene-LU631_RS02170;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154839.1;locus_tag=LU631_RS02170;partial=true;product=PhzF family phenazine biosynthesis protein;pseudo=true;start_range=.,437828;transl_table=11 NZ_CP089940.1 RefSeq gene 438407 438769 . + . ID=gene-LU631_RS02175;Name=LU631_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02175;old_locus_tag=LU631_02175 NZ_CP089940.1 Protein Homology CDS 438407 438769 . + 0 ID=cds-WP_232426870.1;Parent=gene-LU631_RS02175;Dbxref=Genbank:WP_232426870.1;Name=WP_232426870.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: protein motif:HMM:NF024809.2;locus_tag=LU631_RS02175;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_232426870.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 438918 439417 . + . ID=gene-LU631_RS02180;Name=LU631_RS02180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS02180;old_locus_tag=LU631_02180;pseudo=true NZ_CP089940.1 Protein Homology CDS 438918 439417 . + 0 ID=cds-LU631_RS02180;Parent=gene-LU631_RS02180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852024.1;locus_tag=LU631_RS02180;product=LysE family translocator;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 439513 441102 . - . ID=gene-LU631_RS02185;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=LU631_RS02185;old_locus_tag=LU631_02185 NZ_CP089940.1 Protein Homology CDS 439513 441102 . - 0 ID=cds-WP_016191277.1;Parent=gene-LU631_RS02185;Dbxref=Genbank:WP_016191277.1;Name=WP_016191277.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200179.1;locus_tag=LU631_RS02185;product=malate dehydrogenase (quinone);protein_id=WP_016191277.1;transl_table=11 NZ_CP089940.1 RefSeq gene 441673 442440 . - . ID=gene-LU631_RS02190;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=LU631_RS02190;old_locus_tag=LU631_02190 NZ_CP089940.1 Protein Homology CDS 441673 442440 . - 0 ID=cds-WP_016191276.1;Parent=gene-LU631_RS02190;Dbxref=Genbank:WP_016191276.1;Name=WP_016191276.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175887.1;locus_tag=LU631_RS02190;product=triose-phosphate isomerase;protein_id=WP_016191276.1;transl_table=11 NZ_CP089940.1 RefSeq gene 442561 443130 . - . ID=gene-LU631_RS02195;Name=LU631_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02195;old_locus_tag=LU631_02195 NZ_CP089940.1 Protein Homology CDS 442561 443130 . - 0 ID=cds-WP_232426876.1;Parent=gene-LU631_RS02195;Dbxref=Genbank:WP_232426876.1;Name=WP_232426876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010258195.1;locus_tag=LU631_RS02195;product=DUF1454 family protein;protein_id=WP_232426876.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 443245 443660 . + . ID=gene-LU631_RS02200;Name=LU631_RS02200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS02200;old_locus_tag=LU631_02200;pseudo=true NZ_CP089940.1 Protein Homology CDS 443245 443660 . + 0 ID=cds-LU631_RS02200;Parent=gene-LU631_RS02200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441864.1;locus_tag=LU631_RS02200;product=DUF805 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 443661 444407 . - . ID=gene-LU631_RS02205;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=LU631_RS02205;old_locus_tag=LU631_02205 NZ_CP089940.1 Protein Homology CDS 443661 444407 . - 0 ID=cds-WP_016191272.1;Parent=gene-LU631_RS02205;Dbxref=Genbank:WP_016191272.1;Name=WP_016191272.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851251.1;locus_tag=LU631_RS02205;product=ferredoxin--NADP(+) reductase;protein_id=WP_016191272.1;transl_table=11 NZ_CP089940.1 RefSeq gene 444591 445601 . - . ID=gene-LU631_RS02210;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=LU631_RS02210;old_locus_tag=LU631_02210 NZ_CP089940.1 Protein Homology CDS 444591 445601 . - 0 ID=cds-WP_016191271.1;Parent=gene-LU631_RS02210;Dbxref=Genbank:WP_016191271.1;Name=WP_016191271.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229467.1;locus_tag=LU631_RS02210;product=class II fructose-bisphosphatase;protein_id=WP_016191271.1;transl_table=11 NZ_CP089940.1 RefSeq gene 445698 447212 . - . ID=gene-LU631_RS02215;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=LU631_RS02215;old_locus_tag=LU631_02215 NZ_CP089940.1 Protein Homology CDS 445698 447212 . - 0 ID=cds-WP_016191270.1;Parent=gene-LU631_RS02215;Dbxref=Genbank:WP_016191270.1;Name=WP_016191270.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154856.1;locus_tag=LU631_RS02215;product=glycerol kinase GlpK;protein_id=WP_016191270.1;transl_table=11 NZ_CP089940.1 RefSeq gene 447245 448093 . - . ID=gene-LU631_RS02220;Name=LU631_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02220;old_locus_tag=LU631_02220 NZ_CP089940.1 Protein Homology CDS 447245 448093 . - 0 ID=cds-WP_016191269.1;Parent=gene-LU631_RS02220;Dbxref=Genbank:WP_016191269.1;Name=WP_016191269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007885383.1;locus_tag=LU631_RS02220;product=aquaporin family protein;protein_id=WP_016191269.1;transl_table=11 NZ_CP089940.1 RefSeq gene 448529 448768 . + . ID=gene-LU631_RS02225;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=LU631_RS02225;old_locus_tag=LU631_02225 NZ_CP089940.1 Protein Homology CDS 448529 448768 . + 0 ID=cds-WP_016191268.1;Parent=gene-LU631_RS02225;Dbxref=Genbank:WP_016191268.1;Name=WP_016191268.1;Ontology_term=GO:0043093,GO:0090529,GO:0005737;gbkey=CDS;gene=zapB;go_component=cytoplasm|0005737||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114846.1;locus_tag=LU631_RS02225;product=cell division protein ZapB;protein_id=WP_016191268.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 448930 449367 . + . ID=gene-LU631_RS02230;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS02230;old_locus_tag=LU631_02230;pseudo=true NZ_CP089940.1 Protein Homology CDS 448930 449367 . + 0 ID=cds-LU631_RS02230;Parent=gene-LU631_RS02230;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS02230;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 449449 449934 . - . ID=gene-LU631_RS02235;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=LU631_RS02235;old_locus_tag=LU631_02235 NZ_CP089940.1 Protein Homology CDS 449449 449934 . - 0 ID=cds-WP_016191267.1;Parent=gene-LU631_RS02235;Dbxref=Genbank:WP_016191267.1;Name=WP_016191267.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=LU631_RS02235;product=ribonuclease E activity regulator RraA;protein_id=WP_016191267.1;transl_table=11 NZ_CP089940.1 RefSeq gene 450041 450970 . - . ID=gene-LU631_RS02240;Name=LU631_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02240;old_locus_tag=LU631_02240 NZ_CP089940.1 Protein Homology CDS 450041 450970 . - 0 ID=cds-WP_016191266.1;Parent=gene-LU631_RS02240;Dbxref=Genbank:WP_016191266.1;Name=WP_016191266.1;Ontology_term=GO:0009234,GO:0046428,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase activity|0046428||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200192.1;locus_tag=LU631_RS02240;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_016191266.1;transl_table=11 NZ_CP089940.1 RefSeq gene 451259 452590 . - . ID=gene-LU631_RS02245;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=LU631_RS02245;old_locus_tag=LU631_02245 NZ_CP089940.1 Protein Homology CDS 451259 452590 . - 0 ID=cds-WP_016191265.1;Parent=gene-LU631_RS02245;Dbxref=Genbank:WP_016191265.1;Name=WP_016191265.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524;gbkey=CDS;gene=hslU;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=LU631_RS02245;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_016191265.1;transl_table=11 NZ_CP089940.1 RefSeq gene 452601 453131 . - . ID=gene-LU631_RS02250;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=LU631_RS02250;old_locus_tag=LU631_02250 NZ_CP089940.1 Protein Homology CDS 452601 453131 . - 0 ID=cds-WP_016191264.1;Parent=gene-LU631_RS02250;Dbxref=Genbank:WP_016191264.1;Name=WP_016191264.1;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007704206.1;locus_tag=LU631_RS02250;product=ATP-dependent protease subunit HslV;protein_id=WP_016191264.1;transl_table=11 NZ_CP089940.1 RefSeq gene 453226 454119 . - . ID=gene-LU631_RS02255;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=LU631_RS02255;old_locus_tag=LU631_02255 NZ_CP089940.1 Protein Homology CDS 453226 454119 . - 0 ID=cds-WP_016191263.1;Parent=gene-LU631_RS02255;Dbxref=Genbank:WP_016191263.1;Name=WP_016191263.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsN;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666526.1;locus_tag=LU631_RS02255;product=cell division protein FtsN;protein_id=WP_016191263.1;transl_table=11 NZ_CP089940.1 RefSeq gene 454291 455328 . - . ID=gene-LU631_RS02260;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=LU631_RS02260;old_locus_tag=LU631_02260 NZ_CP089940.1 Protein Homology CDS 454291 455328 . - 0 ID=cds-WP_016191262.1;Parent=gene-LU631_RS02260;Dbxref=Genbank:WP_016191262.1;Name=WP_016191262.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013510987.1;locus_tag=LU631_RS02260;product=DNA-binding transcriptional regulator CytR;protein_id=WP_016191262.1;transl_table=11 NZ_CP089940.1 RefSeq gene 455530 457728 . - . ID=gene-LU631_RS02265;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=LU631_RS02265;old_locus_tag=LU631_02265 NZ_CP089940.1 Protein Homology CDS 455530 457728 . - 0 ID=cds-WP_016191261.1;Parent=gene-LU631_RS02265;Dbxref=Genbank:WP_016191261.1;Name=WP_016191261.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147463.1;locus_tag=LU631_RS02265;product=primosomal protein N';protein_id=WP_016191261.1;transl_table=11 NZ_CP089940.1 RefSeq gene 457945 458160 . + . ID=gene-LU631_RS02270;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=LU631_RS02270;old_locus_tag=LU631_02270 NZ_CP089940.1 Protein Homology CDS 457945 458160 . + 0 ID=cds-WP_016191260.1;Parent=gene-LU631_RS02270;Dbxref=Genbank:WP_016191260.1;Name=WP_016191260.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847674.1;locus_tag=LU631_RS02270;product=50S ribosomal protein L31;protein_id=WP_016191260.1;transl_table=11 NZ_CP089940.1 RefSeq gene 458725 459042 . - . ID=gene-LU631_RS02275;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=LU631_RS02275;old_locus_tag=LU631_02275 NZ_CP089940.1 Protein Homology CDS 458725 459042 . - 0 ID=cds-WP_016191259.1;Parent=gene-LU631_RS02275;Dbxref=Genbank:WP_016191259.1;Name=WP_016191259.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=LU631_RS02275;product=met regulon transcriptional regulator MetJ;protein_id=WP_016191259.1;transl_table=11 NZ_CP089940.1 RefSeq gene 459286 460446 . + . ID=gene-LU631_RS02280;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=LU631_RS02280;old_locus_tag=LU631_02280 NZ_CP089940.1 Protein Homology CDS 459286 460446 . + 0 ID=cds-WP_016191258.1;Parent=gene-LU631_RS02280;Dbxref=Genbank:WP_016191258.1;Name=WP_016191258.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455964.1;locus_tag=LU631_RS02280;product=cystathionine gamma-synthase;protein_id=WP_016191258.1;transl_table=11 NZ_CP089940.1 RefSeq gene 460449 462878 . + . ID=gene-LU631_RS02285;Name=LU631_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02285;old_locus_tag=LU631_02285 NZ_CP089940.1 Protein Homology CDS 460449 462878 . + 0 ID=cds-WP_016191257.1;Parent=gene-LU631_RS02285;Dbxref=Genbank:WP_016191257.1;Name=WP_016191257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666535.1;locus_tag=LU631_RS02285;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_016191257.1;transl_table=11 NZ_CP089940.1 RefSeq gene 463092 463988 . + . ID=gene-LU631_RS02290;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=LU631_RS02290;old_locus_tag=LU631_02290 NZ_CP089940.1 Protein Homology CDS 463092 463988 . + 0 ID=cds-WP_016191256.1;Parent=gene-LU631_RS02290;Dbxref=Genbank:WP_016191256.1;Name=WP_016191256.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008926936.1;locus_tag=LU631_RS02290;product=methylenetetrahydrofolate reductase;protein_id=WP_016191256.1;transl_table=11 NZ_CP089940.1 RefSeq gene 464401 467052 . - . ID=gene-LU631_RS02295;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=LU631_RS02295;old_locus_tag=LU631_02295 NZ_CP089940.1 Protein Homology CDS 464401 467052 . - 0 ID=cds-WP_016191254.1;Parent=gene-LU631_RS02295;Dbxref=Genbank:WP_016191254.1;Name=WP_016191254.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=LU631_RS02295;product=phosphoenolpyruvate carboxylase;protein_id=WP_016191254.1;transl_table=11 NZ_CP089940.1 RefSeq gene 467418 468569 . - . ID=gene-LU631_RS02300;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=LU631_RS02300;old_locus_tag=LU631_02300 NZ_CP089940.1 Protein Homology CDS 467418 468569 . - 0 ID=cds-WP_016191253.1;Parent=gene-LU631_RS02300;Dbxref=Genbank:WP_016191253.1;Name=WP_016191253.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418392.1;locus_tag=LU631_RS02300;product=acetylornithine deacetylase;protein_id=WP_016191253.1;transl_table=11 NZ_CP089940.1 RefSeq gene 468763 469767 . + . ID=gene-LU631_RS02305;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=LU631_RS02305;old_locus_tag=LU631_02305 NZ_CP089940.1 Protein Homology CDS 468763 469767 . + 0 ID=cds-WP_016191252.1;Parent=gene-LU631_RS02305;Dbxref=Genbank:WP_016191252.1;Name=WP_016191252.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278246.1;locus_tag=LU631_RS02305;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_016191252.1;transl_table=11 NZ_CP089940.1 RefSeq gene 469783 470559 . + . ID=gene-LU631_RS02310;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=LU631_RS02310;old_locus_tag=LU631_02310 NZ_CP089940.1 Protein Homology CDS 469783 470559 . + 0 ID=cds-WP_016191251.1;Parent=gene-LU631_RS02310;Dbxref=Genbank:WP_016191251.1;Name=WP_016191251.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575262.1;locus_tag=LU631_RS02310;product=acetylglutamate kinase;protein_id=WP_016191251.1;transl_table=11 NZ_CP089940.1 RefSeq gene 470579 471793 . + . ID=gene-LU631_RS02315;Name=LU631_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02315;old_locus_tag=LU631_02315 NZ_CP089940.1 Protein Homology CDS 470579 471793 . + 0 ID=cds-WP_016191250.1;Parent=gene-LU631_RS02315;Dbxref=Genbank:WP_016191250.1;Name=WP_016191250.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666542.1;locus_tag=LU631_RS02315;product=argininosuccinate synthase;protein_id=WP_016191250.1;transl_table=11 NZ_CP089940.1 RefSeq gene 471878 473251 . + . ID=gene-LU631_RS02320;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=LU631_RS02320;old_locus_tag=LU631_02320 NZ_CP089940.1 Protein Homology CDS 471878 473251 . + 0 ID=cds-WP_016191249.1;Parent=gene-LU631_RS02320;Dbxref=Genbank:WP_016191249.1;Name=WP_016191249.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154878.1;locus_tag=LU631_RS02320;product=argininosuccinate lyase;protein_id=WP_016191249.1;transl_table=11 NZ_CP089940.1 RefSeq gene 473606 474043 . + . ID=gene-LU631_RS02325;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS02325;old_locus_tag=LU631_02325 NZ_CP089940.1 Protein Homology CDS 473606 474043 . + 0 ID=cds-WP_016191248.1;Parent=gene-LU631_RS02325;Dbxref=Genbank:WP_016191248.1;Name=WP_016191248.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS02325;product=IS200/IS605 family transposase;protein_id=WP_016191248.1;transl_table=11 NZ_CP089940.1 RefSeq gene 474254 475156 . + . ID=gene-LU631_RS02330;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=LU631_RS02330;old_locus_tag=LU631_02330 NZ_CP089940.1 Protein Homology CDS 474254 475156 . + 0 ID=cds-WP_016191247.1;Parent=gene-LU631_RS02330;Dbxref=Genbank:WP_016191247.1;Name=WP_016191247.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010308165.1;locus_tag=LU631_RS02330;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_016191247.1;transl_table=11 NZ_CP089940.1 RefSeq gene 475153 476553 . - . ID=gene-LU631_RS02335;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=LU631_RS02335;old_locus_tag=LU631_02335 NZ_CP089940.1 Protein Homology CDS 475153 476553 . - 0 ID=cds-WP_016191246.1;Parent=gene-LU631_RS02335;Dbxref=Genbank:WP_016191246.1;Name=WP_016191246.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (B-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=LU631_RS02335;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_016191246.1;transl_table=11 NZ_CP089940.1 RefSeq gene 476746 477381 . + . ID=gene-LU631_RS02340;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=LU631_RS02340;old_locus_tag=LU631_02340 NZ_CP089940.1 Protein Homology CDS 476746 477381 . + 0 ID=cds-WP_016191245.1;Parent=gene-LU631_RS02340;Dbxref=Genbank:WP_016191245.1;Name=WP_016191245.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154882.1;locus_tag=LU631_RS02340;product=HTH-type transcriptional repressor FabR;protein_id=WP_016191245.1;transl_table=11 NZ_CP089940.1 RefSeq gene 477530 478738 . + . ID=gene-LU631_RS02345;Name=LU631_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02345;old_locus_tag=LU631_02345 NZ_CP089940.1 Protein Homology CDS 477530 478738 . + 0 ID=cds-WP_046372139.1;Parent=gene-LU631_RS02345;Dbxref=Genbank:WP_046372139.1;Name=WP_046372139.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS02345;product=IS256 family transposase;protein_id=WP_046372139.1;transl_table=11 NZ_CP089940.1 RefSeq gene 479124 479672 . - . ID=gene-LU631_RS02350;Name=LU631_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02350;old_locus_tag=LU631_02350 NZ_CP089940.1 Protein Homology CDS 479124 479672 . - 0 ID=cds-WP_016191243.1;Parent=gene-LU631_RS02350;Dbxref=Genbank:WP_016191243.1;Name=WP_016191243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303420.1;locus_tag=LU631_RS02350;product=hypothetical protein;protein_id=WP_016191243.1;transl_table=11 NZ_CP089940.1 RefSeq gene 479831 480067 . + . ID=gene-LU631_RS02355;Name=LU631_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02355;old_locus_tag=LU631_02355 NZ_CP089940.1 Protein Homology CDS 479831 480067 . + 0 ID=cds-WP_016191242.1;Parent=gene-LU631_RS02355;Dbxref=Genbank:WP_016191242.1;Name=WP_016191242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000989761.1;locus_tag=LU631_RS02355;product=helix-turn-helix domain-containing protein;protein_id=WP_016191242.1;transl_table=11 NZ_CP089940.1 RefSeq gene 480069 480857 . + . ID=gene-LU631_RS02360;Name=LU631_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02360;old_locus_tag=LU631_02360 NZ_CP089940.1 Protein Homology CDS 480069 480857 . + 0 ID=cds-WP_016191241.1;Parent=gene-LU631_RS02360;Dbxref=Genbank:WP_016191241.1;Name=WP_016191241.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF014380.2;locus_tag=LU631_RS02360;product=DNA-binding protein;protein_id=WP_016191241.1;transl_table=11 NZ_CP089940.1 RefSeq gene 480857 481030 . + . ID=gene-LU631_RS02365;Name=LU631_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02365;old_locus_tag=LU631_02365 NZ_CP089940.1 GeneMarkS-2+ CDS 480857 481030 . + 0 ID=cds-WP_016191240.1;Parent=gene-LU631_RS02365;Dbxref=Genbank:WP_016191240.1;Name=WP_016191240.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02365;product=hypothetical protein;protein_id=WP_016191240.1;transl_table=11 NZ_CP089940.1 RefSeq gene 481169 481396 . + . ID=gene-LU631_RS02370;Name=LU631_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02370;old_locus_tag=LU631_02370 NZ_CP089940.1 Protein Homology CDS 481169 481396 . + 0 ID=cds-WP_016191238.1;Parent=gene-LU631_RS02370;Dbxref=Genbank:WP_016191238.1;Name=WP_016191238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088902.1;locus_tag=LU631_RS02370;product=hypothetical protein;protein_id=WP_016191238.1;transl_table=11 NZ_CP089940.1 RefSeq gene 481386 482012 . + . ID=gene-LU631_RS02375;Name=LU631_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02375;old_locus_tag=LU631_02375 NZ_CP089940.1 Protein Homology CDS 481386 482012 . + 0 ID=cds-WP_046372140.1;Parent=gene-LU631_RS02375;Dbxref=Genbank:WP_046372140.1;Name=WP_046372140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088898.1;locus_tag=LU631_RS02375;product=DUF3164 family protein;protein_id=WP_046372140.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 482022 482117 . + . ID=gene-LU631_RS02380;Name=LU631_RS02380;end_range=482117,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS02380;old_locus_tag=LU631_02380;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 482022 482117 . + 0 ID=cds-LU631_RS02380;Parent=gene-LU631_RS02380;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=482117,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033650.1;locus_tag=LU631_RS02380;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 482491 482664 . + . ID=gene-LU631_RS02385;Name=LU631_RS02385;end_range=482664,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS02385;old_locus_tag=LU631_02385;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 482491 482664 . + 0 ID=cds-LU631_RS02385;Parent=gene-LU631_RS02385;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=482664,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707455.1;locus_tag=LU631_RS02385;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 482659 483834 . + . ID=gene-LU631_RS02390;Name=LU631_RS02390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS02390;old_locus_tag=LU631_02390;pseudo=true NZ_CP089940.1 Protein Homology CDS 482659 483834 . + 0 ID=cds-LU631_RS02390;Parent=gene-LU631_RS02390;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558175.1;locus_tag=LU631_RS02390;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 483998 484147 . - . ID=gene-LU631_RS02395;Name=LU631_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02395;old_locus_tag=LU631_02395 NZ_CP089940.1 GeneMarkS-2+ CDS 483998 484147 . - 0 ID=cds-WP_157275234.1;Parent=gene-LU631_RS02395;Dbxref=Genbank:WP_157275234.1;Name=WP_157275234.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02395;product=hypothetical protein;protein_id=WP_157275234.1;transl_table=11 NZ_CP089940.1 RefSeq gene 484394 485494 . - . ID=gene-LU631_RS02400;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=LU631_RS02400;old_locus_tag=LU631_02400 NZ_CP089940.1 Protein Homology CDS 484394 485494 . - 0 ID=cds-WP_016191236.1;Parent=gene-LU631_RS02400;Dbxref=Genbank:WP_016191236.1;Name=WP_016191236.1;Ontology_term=GO:0006400,GO:0030697;gbkey=CDS;gene=trmA;go_function=S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity|0030697||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041460630.1;locus_tag=LU631_RS02400;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_016191236.1;transl_table=11 NZ_CP089940.1 RefSeq gene 486258 487124 . + . ID=gene-LU631_RS02405;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=LU631_RS02405;old_locus_tag=LU631_02405 NZ_CP089940.1 Protein Homology CDS 486258 487124 . + 0 ID=cds-WP_016191235.1;Parent=gene-LU631_RS02405;Dbxref=Genbank:WP_016191235.1;Name=WP_016191235.1;Ontology_term=GO:0006807,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001312258.1;locus_tag=LU631_RS02405;product=glutamate racemase;protein_id=WP_016191235.1;transl_table=11 NZ_CP089940.1 RefSeq gene 487505 489046 . + . ID=gene-LU631_RS02410;Name=LU631_RS02410;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU631_RS02410;old_locus_tag=LU631_02410 NZ_CP089940.1 cmsearch rRNA 487505 489046 . + . ID=rna-LU631_RS02410;Parent=gene-LU631_RS02410;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS02410;product=16S ribosomal RNA NZ_CP089940.1 cmsearch exon 487505 489046 . + . ID=exon-LU631_RS02410-1;Parent=rna-LU631_RS02410;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS02410;product=16S ribosomal RNA NZ_CP089940.1 RefSeq gene 489119 489194 . + . ID=gene-LU631_RS02415;Name=LU631_RS02415;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS02415;old_locus_tag=LU631_02415 NZ_CP089940.1 tRNAscan-SE tRNA 489119 489194 . + . ID=rna-LU631_RS02415;Parent=gene-LU631_RS02415;anticodon=(pos:489153..489155);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS02415;product=tRNA-Glu NZ_CP089940.1 tRNAscan-SE exon 489119 489194 . + . ID=exon-LU631_RS02415-1;Parent=rna-LU631_RS02415;anticodon=(pos:489153..489155);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS02415;product=tRNA-Glu NZ_CP089940.1 RefSeq gene 489397 492299 . + . ID=gene-LU631_RS02420;Name=LU631_RS02420;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU631_RS02420;old_locus_tag=LU631_02420 NZ_CP089940.1 cmsearch rRNA 489397 492299 . + . ID=rna-LU631_RS02420;Parent=gene-LU631_RS02420;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS02420;product=23S ribosomal RNA NZ_CP089940.1 cmsearch exon 489397 492299 . + . ID=exon-LU631_RS02420-1;Parent=rna-LU631_RS02420;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS02420;product=23S ribosomal RNA NZ_CP089940.1 RefSeq gene 492503 492618 . + . ID=gene-LU631_RS02425;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LU631_RS02425;old_locus_tag=LU631_02425 NZ_CP089940.1 cmsearch rRNA 492503 492618 . + . ID=rna-LU631_RS02425;Parent=gene-LU631_RS02425;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS02425;product=5S ribosomal RNA NZ_CP089940.1 cmsearch exon 492503 492618 . + . ID=exon-LU631_RS02425-1;Parent=rna-LU631_RS02425;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS02425;product=5S ribosomal RNA NZ_CP089940.1 RefSeq gene 492756 493793 . + . ID=gene-LU631_RS02430;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=LU631_RS02430;old_locus_tag=LU631_02430 NZ_CP089940.1 Protein Homology CDS 492756 493793 . + 0 ID=cds-WP_046372142.1;Parent=gene-LU631_RS02430;Dbxref=Genbank:WP_046372142.1;Name=WP_046372142.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200287.1;locus_tag=LU631_RS02430;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_046372142.1;transl_table=11 NZ_CP089940.1 RefSeq gene 493790 494758 . + . ID=gene-LU631_RS02435;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=LU631_RS02435;old_locus_tag=LU631_02435 NZ_CP089940.1 Protein Homology CDS 493790 494758 . + 0 ID=cds-WP_016191233.1;Parent=gene-LU631_RS02435;Dbxref=Genbank:WP_016191233.1;Name=WP_016191233.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542967.1;locus_tag=LU631_RS02435;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_016191233.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 494836 495623 . - . ID=gene-LU631_RS02440;Name=LU631_RS02440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS02440;old_locus_tag=LU631_02440;partial=true;pseudo=true;start_range=.,494836 NZ_CP089940.1 Protein Homology CDS 494836 495623 . - 0 ID=cds-LU631_RS02440;Parent=gene-LU631_RS02440;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171269.1;locus_tag=LU631_RS02440;partial=true;product=alpha/beta hydrolase;pseudo=true;start_range=.,494836;transl_table=11 NZ_CP089940.1 RefSeq gene 495861 498044 . - . ID=gene-LU631_RS02445;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=LU631_RS02445;old_locus_tag=LU631_02445 NZ_CP089940.1 Protein Homology CDS 495861 498044 . - 0 ID=cds-WP_016191232.1;Parent=gene-LU631_RS02445;Dbxref=Genbank:WP_016191232.1;Name=WP_016191232.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418377.1;locus_tag=LU631_RS02445;product=catalase/peroxidase HPI;protein_id=WP_016191232.1;transl_table=11 NZ_CP089940.1 RefSeq gene 498379 499731 . - . ID=gene-LU631_RS02450;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=LU631_RS02450;old_locus_tag=LU631_02450 NZ_CP089940.1 Protein Homology CDS 498379 499731 . - 0 ID=cds-WP_016191231.1;Parent=gene-LU631_RS02450;Dbxref=Genbank:WP_016191231.1;Name=WP_016191231.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=LU631_RS02450;product=glutathione-disulfide reductase;protein_id=WP_016191231.1;transl_table=11 NZ_CP089940.1 RefSeq gene 499890 500957 . - . ID=gene-LU631_RS02455;Name=LU631_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02455;old_locus_tag=LU631_02455 NZ_CP089940.1 Protein Homology CDS 499890 500957 . - 0 ID=cds-WP_016191230.1;Parent=gene-LU631_RS02455;Dbxref=Genbank:WP_016191230.1;Name=WP_016191230.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006797148.1;locus_tag=LU631_RS02455;product=phage integrase Arm DNA-binding domain-containing protein;protein_id=WP_016191230.1;transl_table=11 NZ_CP089940.1 RefSeq gene 500932 501177 . - . ID=gene-LU631_RS02460;Name=LU631_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02460;old_locus_tag=LU631_02460 NZ_CP089940.1 Protein Homology CDS 500932 501177 . - 0 ID=cds-WP_016191229.1;Parent=gene-LU631_RS02460;Dbxref=Genbank:WP_016191229.1;Name=WP_016191229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813303.1;locus_tag=LU631_RS02460;product=Excisionase domain protein;protein_id=WP_016191229.1;transl_table=11 NZ_CP089940.1 RefSeq gene 501207 501461 . - . ID=gene-LU631_RS02465;Name=LU631_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02465;old_locus_tag=LU631_02465 NZ_CP089940.1 GeneMarkS-2+ CDS 501207 501461 . - 0 ID=cds-WP_152664237.1;Parent=gene-LU631_RS02465;Dbxref=Genbank:WP_152664237.1;Name=WP_152664237.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02465;product=hypothetical protein;protein_id=WP_152664237.1;transl_table=11 NZ_CP089940.1 RefSeq gene 501606 501971 . - . ID=gene-LU631_RS02470;Name=LU631_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02470;old_locus_tag=LU631_02470 NZ_CP089940.1 GeneMarkS-2+ CDS 501606 501971 . - 0 ID=cds-WP_040465591.1;Parent=gene-LU631_RS02470;Dbxref=Genbank:WP_040465591.1;Name=WP_040465591.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02470;product=hypothetical protein;protein_id=WP_040465591.1;transl_table=11 NZ_CP089940.1 RefSeq gene 501968 502189 . - . ID=gene-LU631_RS02475;Name=LU631_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02475;old_locus_tag=LU631_02475 NZ_CP089940.1 Protein Homology CDS 501968 502189 . - 0 ID=cds-WP_016191225.1;Parent=gene-LU631_RS02475;Dbxref=Genbank:WP_016191225.1;Name=WP_016191225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009637423.1;locus_tag=LU631_RS02475;product=hypothetical protein;protein_id=WP_016191225.1;transl_table=11 NZ_CP089940.1 RefSeq gene 502186 502455 . - . ID=gene-LU631_RS02480;Name=LU631_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02480;old_locus_tag=LU631_02480 NZ_CP089940.1 Protein Homology CDS 502186 502455 . - 0 ID=cds-WP_016191224.1;Parent=gene-LU631_RS02480;Dbxref=Genbank:WP_016191224.1;Name=WP_016191224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008109311.1;locus_tag=LU631_RS02480;product=DUF5405 family protein;protein_id=WP_016191224.1;transl_table=11 NZ_CP089940.1 RefSeq gene 502554 503327 . - . ID=gene-LU631_RS02485;Name=LU631_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02485;old_locus_tag=LU631_02485 NZ_CP089940.1 Protein Homology CDS 502554 503327 . - 0 ID=cds-WP_082103801.1;Parent=gene-LU631_RS02485;Dbxref=Genbank:WP_082103801.1;Name=WP_082103801.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016343.2;locus_tag=LU631_RS02485;product=DUF551 domain-containing protein;protein_id=WP_082103801.1;transl_table=11 NZ_CP089940.1 RefSeq gene 503324 503548 . - . ID=gene-LU631_RS02490;Name=LU631_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02490;old_locus_tag=LU631_02490 NZ_CP089940.1 Protein Homology CDS 503324 503548 . - 0 ID=cds-WP_046372144.1;Parent=gene-LU631_RS02490;Dbxref=Genbank:WP_046372144.1;Name=WP_046372144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236813.1;locus_tag=LU631_RS02490;product=hypothetical protein;protein_id=WP_046372144.1;transl_table=11 NZ_CP089940.1 RefSeq gene 503541 504458 . - . ID=gene-LU631_RS02495;Name=LU631_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02495;old_locus_tag=LU631_02495 NZ_CP089940.1 GeneMarkS-2+ CDS 503541 504458 . - 0 ID=cds-WP_046372145.1;Parent=gene-LU631_RS02495;Dbxref=Genbank:WP_046372145.1;Name=WP_046372145.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02495;product=hypothetical protein;protein_id=WP_046372145.1;transl_table=11 NZ_CP089940.1 RefSeq gene 504455 505036 . - . ID=gene-LU631_RS02500;Name=LU631_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02500;old_locus_tag=LU631_02500 NZ_CP089940.1 Protein Homology CDS 504455 505036 . - 0 ID=cds-WP_232426869.1;Parent=gene-LU631_RS02500;Dbxref=Genbank:WP_232426869.1;Name=WP_232426869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016530552.1;locus_tag=LU631_RS02500;product=hypothetical protein;protein_id=WP_232426869.1;transl_table=11 NZ_CP089940.1 RefSeq gene 505046 505315 . - . ID=gene-LU631_RS02505;Name=LU631_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02505;old_locus_tag=LU631_02505 NZ_CP089940.1 GeneMarkS-2+ CDS 505046 505315 . - 0 ID=cds-WP_016191220.1;Parent=gene-LU631_RS02505;Dbxref=Genbank:WP_016191220.1;Name=WP_016191220.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02505;product=hypothetical protein;protein_id=WP_016191220.1;transl_table=11 NZ_CP089940.1 RefSeq gene 505336 505971 . - . ID=gene-LU631_RS02510;Name=LU631_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02510;old_locus_tag=LU631_02510 NZ_CP089940.1 Protein Homology CDS 505336 505971 . - 0 ID=cds-WP_016191219.1;Parent=gene-LU631_RS02510;Dbxref=Genbank:WP_016191219.1;Name=WP_016191219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000031374.1;locus_tag=LU631_RS02510;product=ERF family protein;protein_id=WP_016191219.1;transl_table=11 NZ_CP089940.1 RefSeq gene 506284 506415 . - . ID=gene-LU631_RS02515;Name=LU631_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02515;old_locus_tag=LU631_02515 NZ_CP089940.1 Protein Homology CDS 506284 506415 . - 0 ID=cds-WP_016191218.1;Parent=gene-LU631_RS02515;Dbxref=Genbank:WP_016191218.1;Name=WP_016191218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017346155.1;locus_tag=LU631_RS02515;product=protease FtsH-inhibitory lysogeny factor CIII;protein_id=WP_016191218.1;transl_table=11 NZ_CP089940.1 RefSeq gene 506427 506918 . - . ID=gene-LU631_RS02520;Name=LU631_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02520;old_locus_tag=LU631_02520 NZ_CP089940.1 Protein Homology CDS 506427 506918 . - 0 ID=cds-WP_016191217.1;Parent=gene-LU631_RS02520;Dbxref=Genbank:WP_016191217.1;Name=WP_016191217.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013043.2;locus_tag=LU631_RS02520;product=HNH endonuclease;protein_id=WP_016191217.1;transl_table=11 NZ_CP089940.1 RefSeq gene 507353 507583 . - . ID=gene-LU631_RS02525;Name=LU631_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02525;old_locus_tag=LU631_02525 NZ_CP089940.1 GeneMarkS-2+ CDS 507353 507583 . - 0 ID=cds-WP_016191216.1;Parent=gene-LU631_RS02525;Dbxref=Genbank:WP_016191216.1;Name=WP_016191216.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02525;product=hypothetical protein;protein_id=WP_016191216.1;transl_table=11 NZ_CP089940.1 RefSeq gene 507585 507920 . - . ID=gene-LU631_RS02530;Name=LU631_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02530;old_locus_tag=LU631_02530 NZ_CP089940.1 Protein Homology CDS 507585 507920 . - 0 ID=cds-WP_016191215.1;Parent=gene-LU631_RS02530;Dbxref=Genbank:WP_016191215.1;Name=WP_016191215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088201.1;locus_tag=LU631_RS02530;product=hypothetical protein;protein_id=WP_016191215.1;transl_table=11 NZ_CP089940.1 RefSeq gene 508289 508462 . + . ID=gene-LU631_RS02535;Name=LU631_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02535;old_locus_tag=LU631_02535 NZ_CP089940.1 Protein Homology CDS 508289 508462 . + 0 ID=cds-WP_016191214.1;Parent=gene-LU631_RS02535;Dbxref=Genbank:WP_016191214.1;Name=WP_016191214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004223168.1;locus_tag=LU631_RS02535;product=DUF2767 family protein;protein_id=WP_016191214.1;transl_table=11 NZ_CP089940.1 RefSeq gene 508497 509003 . - . ID=gene-LU631_RS02540;Name=LU631_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02540;old_locus_tag=LU631_02540 NZ_CP089940.1 Protein Homology CDS 508497 509003 . - 0 ID=cds-WP_016191213.1;Parent=gene-LU631_RS02540;Dbxref=Genbank:WP_016191213.1;Name=WP_016191213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244714.1;locus_tag=LU631_RS02540;product=DUF4411 family protein;protein_id=WP_016191213.1;transl_table=11 NZ_CP089940.1 RefSeq gene 509000 510124 . - . ID=gene-LU631_RS02545;Name=LU631_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02545;old_locus_tag=LU631_02545 NZ_CP089940.1 Protein Homology CDS 509000 510124 . - 0 ID=cds-WP_040465590.1;Parent=gene-LU631_RS02545;Dbxref=Genbank:WP_040465590.1;Name=WP_040465590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244715.1;locus_tag=LU631_RS02545;product=XRE family transcriptional regulator;protein_id=WP_040465590.1;transl_table=11 NZ_CP089940.1 RefSeq gene 510263 510955 . - . ID=gene-LU631_RS02550;Name=LU631_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02550;old_locus_tag=LU631_02550 NZ_CP089940.1 Protein Homology CDS 510263 510955 . - 0 ID=cds-WP_016191211.1;Parent=gene-LU631_RS02550;Dbxref=Genbank:WP_016191211.1;Name=WP_016191211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015835682.1;locus_tag=LU631_RS02550;product=helix-turn-helix domain-containing protein;protein_id=WP_016191211.1;transl_table=11 NZ_CP089940.1 RefSeq gene 511031 511258 . + . ID=gene-LU631_RS02555;Name=LU631_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02555;old_locus_tag=LU631_02555 NZ_CP089940.1 Protein Homology CDS 511031 511258 . + 0 ID=cds-WP_016191210.1;Parent=gene-LU631_RS02555;Dbxref=Genbank:WP_016191210.1;Name=WP_016191210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001180318.1;locus_tag=LU631_RS02555;product=regulatory protein from bacteriophage origin;protein_id=WP_016191210.1;transl_table=11 NZ_CP089940.1 RefSeq gene 511394 511699 . + . ID=gene-LU631_RS02560;Name=LU631_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02560;old_locus_tag=LU631_02560 NZ_CP089940.1 Protein Homology CDS 511394 511699 . + 0 ID=cds-WP_016191209.1;Parent=gene-LU631_RS02560;Dbxref=Genbank:WP_016191209.1;Name=WP_016191209.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010281906.1;locus_tag=LU631_RS02560;product=CII family transcriptional regulator;protein_id=WP_016191209.1;transl_table=11 NZ_CP089940.1 RefSeq gene 511718 512419 . + . ID=gene-LU631_RS02565;Name=LU631_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02565;old_locus_tag=LU631_02565 NZ_CP089940.1 Protein Homology CDS 511718 512419 . + 0 ID=cds-WP_016191208.1;Parent=gene-LU631_RS02565;Dbxref=Genbank:WP_016191208.1;Name=WP_016191208.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002383577.1;locus_tag=LU631_RS02565;product=phage antirepressor KilAC domain-containing protein;protein_id=WP_016191208.1;transl_table=11 NZ_CP089940.1 RefSeq gene 512416 512778 . + . ID=gene-LU631_RS02570;Name=LU631_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02570;old_locus_tag=LU631_02570 NZ_CP089940.1 Protein Homology CDS 512416 512778 . + 0 ID=cds-WP_016191207.1;Parent=gene-LU631_RS02570;Dbxref=Genbank:WP_016191207.1;Name=WP_016191207.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247723.1;locus_tag=LU631_RS02570;product=HNH endonuclease;protein_id=WP_016191207.1;transl_table=11 NZ_CP089940.1 RefSeq gene 512759 513478 . + . ID=gene-LU631_RS02575;Name=LU631_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02575;old_locus_tag=LU631_02575 NZ_CP089940.1 Protein Homology CDS 512759 513478 . + 0 ID=cds-WP_016191206.1;Parent=gene-LU631_RS02575;Dbxref=Genbank:WP_016191206.1;Name=WP_016191206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559621.1;locus_tag=LU631_RS02575;product=helix-turn-helix domain-containing protein;protein_id=WP_016191206.1;transl_table=11 NZ_CP089940.1 RefSeq gene 513475 514236 . + . ID=gene-LU631_RS02580;Name=LU631_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02580;old_locus_tag=LU631_02580 NZ_CP089940.1 Protein Homology CDS 513475 514236 . + 0 ID=cds-WP_016191205.1;Parent=gene-LU631_RS02580;Dbxref=Genbank:WP_016191205.1;Name=WP_016191205.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837634.1;locus_tag=LU631_RS02580;product=replication protein P;protein_id=WP_016191205.1;transl_table=11 NZ_CP089940.1 RefSeq gene 514411 514719 . + . ID=gene-LU631_RS02585;Name=LU631_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02585;old_locus_tag=LU631_02585 NZ_CP089940.1 Protein Homology CDS 514411 514719 . + 0 ID=cds-WP_040465589.1;Parent=gene-LU631_RS02585;Dbxref=Genbank:WP_040465589.1;Name=WP_040465589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012815646.1;locus_tag=LU631_RS02585;product=hypothetical protein;protein_id=WP_040465589.1;transl_table=11 NZ_CP089940.1 RefSeq gene 515041 515313 . + . ID=gene-LU631_RS02590;Name=LU631_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02590;old_locus_tag=LU631_02590 NZ_CP089940.1 GeneMarkS-2+ CDS 515041 515313 . + 0 ID=cds-WP_016191201.1;Parent=gene-LU631_RS02590;Dbxref=Genbank:WP_016191201.1;Name=WP_016191201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02590;product=hypothetical protein;protein_id=WP_016191201.1;transl_table=11 NZ_CP089940.1 RefSeq gene 515310 515552 . + . ID=gene-LU631_RS02595;Name=LU631_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02595;old_locus_tag=LU631_02595 NZ_CP089940.1 GeneMarkS-2+ CDS 515310 515552 . + 0 ID=cds-WP_016191200.1;Parent=gene-LU631_RS02595;Dbxref=Genbank:WP_016191200.1;Name=WP_016191200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02595;product=hypothetical protein;protein_id=WP_016191200.1;transl_table=11 NZ_CP089940.1 RefSeq gene 515521 515979 . + . ID=gene-LU631_RS02600;Name=LU631_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02600;old_locus_tag=LU631_02600 NZ_CP089940.1 Protein Homology CDS 515521 515979 . + 0 ID=cds-WP_016191199.1;Parent=gene-LU631_RS02600;Dbxref=Genbank:WP_016191199.1;Name=WP_016191199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011410799.1;locus_tag=LU631_RS02600;product=recombination protein NinB;protein_id=WP_016191199.1;transl_table=11 NZ_CP089940.1 RefSeq gene 516177 516566 . + . ID=gene-LU631_RS02605;Name=LU631_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02605;old_locus_tag=LU631_02605 NZ_CP089940.1 Protein Homology CDS 516177 516566 . + 0 ID=cds-WP_016191198.1;Parent=gene-LU631_RS02605;Dbxref=Genbank:WP_016191198.1;Name=WP_016191198.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215636.1;locus_tag=LU631_RS02605;product=antiterminator Q family protein;protein_id=WP_016191198.1;transl_table=11 NZ_CP089940.1 RefSeq gene 516745 516894 . + . ID=gene-LU631_RS02610;Name=LU631_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02610;old_locus_tag=LU631_02610 NZ_CP089940.1 Protein Homology CDS 516745 516894 . + 0 ID=cds-WP_016191197.1;Parent=gene-LU631_RS02610;Dbxref=Genbank:WP_016191197.1;Name=WP_016191197.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000809168.1;locus_tag=LU631_RS02610;product=Hok/Gef family protein;protein_id=WP_016191197.1;transl_table=11 NZ_CP089940.1 RefSeq gene 517189 517974 . + . ID=gene-LU631_RS02615;Name=LU631_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02615;old_locus_tag=LU631_02615 NZ_CP089940.1 Protein Homology CDS 517189 517974 . + 0 ID=cds-WP_233481332.1;Parent=gene-LU631_RS02615;Dbxref=Genbank:WP_233481332.1;Name=WP_233481332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750874.1;locus_tag=LU631_RS02615;product=Bro-N domain-containing protein;protein_id=WP_233481332.1;transl_table=11 NZ_CP089940.1 RefSeq gene 518413 518784 . + . ID=gene-LU631_RS02620;Name=LU631_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02620;old_locus_tag=LU631_02620 NZ_CP089940.1 Protein Homology CDS 518413 518784 . + 0 ID=cds-WP_016191195.1;Parent=gene-LU631_RS02620;Dbxref=Genbank:WP_016191195.1;Name=WP_016191195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891426.1;locus_tag=LU631_RS02620;product=hypothetical protein;protein_id=WP_016191195.1;transl_table=11 NZ_CP089940.1 RefSeq gene 518781 519083 . + . ID=gene-LU631_RS02625;Name=LU631_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02625;old_locus_tag=LU631_02625 NZ_CP089940.1 Protein Homology CDS 518781 519083 . + 0 ID=cds-WP_016191194.1;Parent=gene-LU631_RS02625;Dbxref=Genbank:WP_016191194.1;Name=WP_016191194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008926859.1;locus_tag=LU631_RS02625;product=hypothetical protein;protein_id=WP_016191194.1;transl_table=11 NZ_CP089940.1 RefSeq gene 519080 519547 . + . ID=gene-LU631_RS02630;Name=LU631_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02630;old_locus_tag=LU631_02630 NZ_CP089940.1 Protein Homology CDS 519080 519547 . + 0 ID=cds-WP_016191193.1;Parent=gene-LU631_RS02630;Dbxref=Genbank:WP_016191193.1;Name=WP_016191193.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008108958.1;locus_tag=LU631_RS02630;product=glycoside hydrolase family protein;protein_id=WP_016191193.1;transl_table=11 NZ_CP089940.1 RefSeq gene 519544 519888 . + . ID=gene-LU631_RS02635;Name=LU631_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02635;old_locus_tag=LU631_02635 NZ_CP089940.1 Protein Homology CDS 519544 519888 . + 0 ID=cds-WP_016191192.1;Parent=gene-LU631_RS02635;Dbxref=Genbank:WP_016191192.1;Name=WP_016191192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136191.1;locus_tag=LU631_RS02635;product=hypothetical protein;protein_id=WP_016191192.1;transl_table=11 NZ_CP089940.1 RefSeq gene 519885 520166 . + . ID=gene-LU631_RS02640;Name=LU631_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02640;old_locus_tag=LU631_02640 NZ_CP089940.1 GeneMarkS-2+ CDS 519885 520166 . + 0 ID=cds-WP_016191191.1;Parent=gene-LU631_RS02640;Dbxref=Genbank:WP_016191191.1;Name=WP_016191191.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02640;product=hypothetical protein;protein_id=WP_016191191.1;transl_table=11 NZ_CP089940.1 RefSeq gene 520599 520790 . + . ID=gene-LU631_RS02645;Name=LU631_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02645;old_locus_tag=LU631_02645 NZ_CP089940.1 GeneMarkS-2+ CDS 520599 520790 . + 0 ID=cds-WP_016191190.1;Parent=gene-LU631_RS02645;Dbxref=Genbank:WP_016191190.1;Name=WP_016191190.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02645;product=hypothetical protein;protein_id=WP_016191190.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 520999 521238 . + . ID=gene-LU631_RS02650;Name=LU631_RS02650;end_range=521238,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS02650;old_locus_tag=LU631_02650;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 520999 521238 . + 0 ID=cds-LU631_RS02650;Parent=gene-LU631_RS02650;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=521238,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015584733.1;locus_tag=LU631_RS02650;partial=true;product=KilA-N domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 521415 521942 . + . ID=gene-LU631_RS02655;Name=LU631_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02655;old_locus_tag=LU631_02655 NZ_CP089940.1 Protein Homology CDS 521415 521942 . + 0 ID=cds-WP_016191189.1;Parent=gene-LU631_RS02655;Dbxref=Genbank:WP_016191189.1;Name=WP_016191189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196871.1;locus_tag=LU631_RS02655;product=terminase small subunit;protein_id=WP_016191189.1;transl_table=11 NZ_CP089940.1 RefSeq gene 522042 523298 . + . ID=gene-LU631_RS02660;Name=LU631_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02660;old_locus_tag=LU631_02660 NZ_CP089940.1 Protein Homology CDS 522042 523298 . + 0 ID=cds-WP_232426875.1;Parent=gene-LU631_RS02660;Dbxref=Genbank:WP_232426875.1;Name=WP_232426875.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01547.1;locus_tag=LU631_RS02660;product=PBSX family phage terminase large subunit;protein_id=WP_232426875.1;transl_table=11 NZ_CP089940.1 RefSeq gene 523334 524716 . + . ID=gene-LU631_RS02665;Name=LU631_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02665;old_locus_tag=LU631_02665 NZ_CP089940.1 Protein Homology CDS 523334 524716 . + 0 ID=cds-WP_233481977.1;Parent=gene-LU631_RS02665;Dbxref=Genbank:WP_233481977.1;Name=WP_233481977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007851391.1;locus_tag=LU631_RS02665;product=DUF1073 domain-containing protein;protein_id=WP_233481977.1;transl_table=11 NZ_CP089940.1 RefSeq gene 524706 525464 . + . ID=gene-LU631_RS02670;Name=LU631_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02670;old_locus_tag=LU631_02670 NZ_CP089940.1 Protein Homology CDS 524706 525464 . + 0 ID=cds-WP_016191186.1;Parent=gene-LU631_RS02670;Dbxref=Genbank:WP_016191186.1;Name=WP_016191186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007851389.1;locus_tag=LU631_RS02670;product=phage minor head protein;protein_id=WP_016191186.1;transl_table=11 NZ_CP089940.1 RefSeq gene 525529 526638 . + . ID=gene-LU631_RS02675;Name=LU631_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02675;old_locus_tag=LU631_02675 NZ_CP089940.1 Protein Homology CDS 525529 526638 . + 0 ID=cds-WP_016191185.1;Parent=gene-LU631_RS02675;Dbxref=Genbank:WP_016191185.1;Name=WP_016191185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606374.1;locus_tag=LU631_RS02675;product=DUF2213 domain-containing protein;protein_id=WP_016191185.1;transl_table=11 NZ_CP089940.1 RefSeq gene 526640 527128 . + . ID=gene-LU631_RS02680;Name=LU631_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02680;old_locus_tag=LU631_02680 NZ_CP089940.1 Protein Homology CDS 526640 527128 . + 0 ID=cds-WP_016191184.1;Parent=gene-LU631_RS02680;Dbxref=Genbank:WP_016191184.1;Name=WP_016191184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606373.1;locus_tag=LU631_RS02680;product=hypothetical protein;protein_id=WP_016191184.1;transl_table=11 NZ_CP089940.1 RefSeq gene 527128 528153 . + . ID=gene-LU631_RS02685;Name=LU631_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02685;old_locus_tag=LU631_02685 NZ_CP089940.1 Protein Homology CDS 527128 528153 . + 0 ID=cds-WP_016191183.1;Parent=gene-LU631_RS02685;Dbxref=Genbank:WP_016191183.1;Name=WP_016191183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606372.1;locus_tag=LU631_RS02685;product=hypothetical protein;protein_id=WP_016191183.1;transl_table=11 NZ_CP089940.1 RefSeq gene 528156 528482 . + . ID=gene-LU631_RS02690;Name=LU631_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02690;old_locus_tag=LU631_02690 NZ_CP089940.1 GeneMarkS-2+ CDS 528156 528482 . + 0 ID=cds-WP_016191182.1;Parent=gene-LU631_RS02690;Dbxref=Genbank:WP_016191182.1;Name=WP_016191182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02690;product=hypothetical protein;protein_id=WP_016191182.1;transl_table=11 NZ_CP089940.1 RefSeq gene 528483 528878 . + . ID=gene-LU631_RS02695;Name=LU631_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02695;old_locus_tag=LU631_02695 NZ_CP089940.1 Protein Homology CDS 528483 528878 . + 0 ID=cds-WP_016191181.1;Parent=gene-LU631_RS02695;Dbxref=Genbank:WP_016191181.1;Name=WP_016191181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606370.1;locus_tag=LU631_RS02695;product=DUF4054 domain-containing protein;protein_id=WP_016191181.1;transl_table=11 NZ_CP089940.1 RefSeq gene 528881 529351 . + . ID=gene-LU631_RS02700;Name=LU631_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02700;old_locus_tag=LU631_02700 NZ_CP089940.1 Protein Homology CDS 528881 529351 . + 0 ID=cds-WP_016191180.1;Parent=gene-LU631_RS02700;Dbxref=Genbank:WP_016191180.1;Name=WP_016191180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606369.1;locus_tag=LU631_RS02700;product=hypothetical protein;protein_id=WP_016191180.1;transl_table=11 NZ_CP089940.1 RefSeq gene 529323 529700 . + . ID=gene-LU631_RS02705;Name=LU631_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02705;old_locus_tag=LU631_02705 NZ_CP089940.1 Protein Homology CDS 529323 529700 . + 0 ID=cds-WP_232426868.1;Parent=gene-LU631_RS02705;Dbxref=Genbank:WP_232426868.1;Name=WP_232426868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001438164.1;locus_tag=LU631_RS02705;product=hypothetical protein;protein_id=WP_232426868.1;transl_table=11 NZ_CP089940.1 RefSeq gene 529697 530215 . + . ID=gene-LU631_RS02710;Name=LU631_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02710;old_locus_tag=LU631_02710 NZ_CP089940.1 Protein Homology CDS 529697 530215 . + 0 ID=cds-WP_016191178.1;Parent=gene-LU631_RS02710;Dbxref=Genbank:WP_016191178.1;Name=WP_016191178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000997697.1;locus_tag=LU631_RS02710;product=hypothetical protein;protein_id=WP_016191178.1;transl_table=11 NZ_CP089940.1 RefSeq gene 530212 531696 . + . ID=gene-LU631_RS02715;Name=LU631_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02715;old_locus_tag=LU631_02715 NZ_CP089940.1 Protein Homology CDS 530212 531696 . + 0 ID=cds-WP_016191177.1;Parent=gene-LU631_RS02715;Dbxref=Genbank:WP_016191177.1;Name=WP_016191177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001609803.1;locus_tag=LU631_RS02715;product=DUF3383 domain-containing protein;protein_id=WP_016191177.1;transl_table=11 NZ_CP089940.1 RefSeq gene 531707 532141 . + . ID=gene-LU631_RS02720;Name=LU631_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02720;old_locus_tag=LU631_02720 NZ_CP089940.1 Protein Homology CDS 531707 532141 . + 0 ID=cds-WP_016191176.1;Parent=gene-LU631_RS02720;Dbxref=Genbank:WP_016191176.1;Name=WP_016191176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001121033.1;locus_tag=LU631_RS02720;product=hypothetical protein;protein_id=WP_016191176.1;transl_table=11 NZ_CP089940.1 RefSeq gene 532141 532545 . + . ID=gene-LU631_RS02725;Name=LU631_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02725;old_locus_tag=LU631_02725 NZ_CP089940.1 Protein Homology CDS 532141 532545 . + 0 ID=cds-WP_016191175.1;Parent=gene-LU631_RS02725;Dbxref=Genbank:WP_016191175.1;Name=WP_016191175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003920119.1;locus_tag=LU631_RS02725;product=hypothetical protein;protein_id=WP_016191175.1;transl_table=11 NZ_CP089940.1 RefSeq gene 532760 534580 . + . ID=gene-LU631_RS02730;Name=LU631_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02730;old_locus_tag=LU631_02730 NZ_CP089940.1 Protein Homology CDS 532760 534580 . + 0 ID=cds-WP_016191174.1;Parent=gene-LU631_RS02730;Dbxref=Genbank:WP_016191174.1;Name=WP_016191174.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013618.2;locus_tag=LU631_RS02730;product=lytic transglycosylase domain-containing protein;protein_id=WP_016191174.1;transl_table=11 NZ_CP089940.1 RefSeq gene 534685 535725 . + . ID=gene-LU631_RS02735;Name=LU631_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02735;old_locus_tag=LU631_02735 NZ_CP089940.1 Protein Homology CDS 534685 535725 . + 0 ID=cds-WP_046371813.1-3;Parent=gene-LU631_RS02735;Dbxref=Genbank:WP_046371813.1;Name=WP_046371813.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS02735;product=IS481 family transposase;protein_id=WP_046371813.1;transl_table=11 NZ_CP089940.1 RefSeq gene 535790 536209 . - . ID=gene-LU631_RS02740;Name=LU631_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02740;old_locus_tag=LU631_02740 NZ_CP089940.1 GeneMarkS-2+ CDS 535790 536209 . - 0 ID=cds-WP_016191173.1;Parent=gene-LU631_RS02740;Dbxref=Genbank:WP_016191173.1;Name=WP_016191173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02740;product=hypothetical protein;protein_id=WP_016191173.1;transl_table=11 NZ_CP089940.1 RefSeq gene 536236 536580 . - . ID=gene-LU631_RS02745;Name=LU631_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02745;old_locus_tag=LU631_02745 NZ_CP089940.1 GeneMarkS-2+ CDS 536236 536580 . - 0 ID=cds-WP_016191172.1;Parent=gene-LU631_RS02745;Dbxref=Genbank:WP_016191172.1;Name=WP_016191172.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02745;product=hypothetical protein;protein_id=WP_016191172.1;transl_table=11 NZ_CP089940.1 RefSeq gene 536564 536794 . + . ID=gene-LU631_RS02750;Name=LU631_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02750;old_locus_tag=LU631_02750 NZ_CP089940.1 GeneMarkS-2+ CDS 536564 536794 . + 0 ID=cds-WP_016191171.1;Parent=gene-LU631_RS02750;Dbxref=Genbank:WP_016191171.1;Name=WP_016191171.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02750;product=hypothetical protein;protein_id=WP_016191171.1;transl_table=11 NZ_CP089940.1 RefSeq gene 536806 537234 . - . ID=gene-LU631_RS02755;Name=LU631_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02755;old_locus_tag=LU631_02755 NZ_CP089940.1 Protein Homology CDS 536806 537234 . - 0 ID=cds-WP_082103803.1;Parent=gene-LU631_RS02755;Dbxref=Genbank:WP_082103803.1;Name=WP_082103803.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF015807.2;locus_tag=LU631_RS02755;product=Arc family DNA-binding protein;protein_id=WP_082103803.1;transl_table=11 NZ_CP089940.1 RefSeq gene 537366 537533 . + . ID=gene-LU631_RS02760;Name=LU631_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02760;old_locus_tag=LU631_02760 NZ_CP089940.1 Protein Homology CDS 537366 537533 . + 0 ID=cds-WP_152664239.1;Parent=gene-LU631_RS02760;Dbxref=Genbank:WP_152664239.1;Name=WP_152664239.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF015807.2;locus_tag=LU631_RS02760;product=Arc family DNA-binding protein;protein_id=WP_152664239.1;transl_table=11 NZ_CP089940.1 RefSeq gene 537607 538245 . + . ID=gene-LU631_RS02765;Name=LU631_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02765;old_locus_tag=LU631_02765 NZ_CP089940.1 Protein Homology CDS 537607 538245 . + 0 ID=cds-WP_016191169.1;Parent=gene-LU631_RS02765;Dbxref=Genbank:WP_016191169.1;Name=WP_016191169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001028069.1;locus_tag=LU631_RS02765;product=BRO family protein;protein_id=WP_016191169.1;transl_table=11 NZ_CP089940.1 RefSeq gene 538325 539113 . + . ID=gene-LU631_RS02770;Name=LU631_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02770;old_locus_tag=LU631_02770 NZ_CP089940.1 Protein Homology CDS 538325 539113 . + 0 ID=cds-WP_016191168.1;Parent=gene-LU631_RS02770;Dbxref=Genbank:WP_016191168.1;Name=WP_016191168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001187765.1;locus_tag=LU631_RS02770;product=ORF6N domain-containing protein;protein_id=WP_016191168.1;transl_table=11 NZ_CP089940.1 RefSeq gene 539122 539463 . - . ID=gene-LU631_RS02775;Name=LU631_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02775;old_locus_tag=LU631_02775 NZ_CP089940.1 GeneMarkS-2+ CDS 539122 539463 . - 0 ID=cds-WP_233481978.1;Parent=gene-LU631_RS02775;Dbxref=Genbank:WP_233481978.1;Name=WP_233481978.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02775;product=hypothetical protein;protein_id=WP_233481978.1;transl_table=11 NZ_CP089940.1 RefSeq gene 539462 540274 . + . ID=gene-LU631_RS02780;Name=LU631_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02780;old_locus_tag=LU631_02780 NZ_CP089940.1 Protein Homology CDS 539462 540274 . + 0 ID=cds-WP_016191167.1;Parent=gene-LU631_RS02780;Dbxref=Genbank:WP_016191167.1;Name=WP_016191167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000511334.1;locus_tag=LU631_RS02780;product=hypothetical protein;protein_id=WP_016191167.1;transl_table=11 NZ_CP089940.1 RefSeq gene 540275 540580 . + . ID=gene-LU631_RS02785;Name=LU631_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02785;old_locus_tag=LU631_02785 NZ_CP089940.1 Protein Homology CDS 540275 540580 . + 0 ID=cds-WP_016191166.1;Parent=gene-LU631_RS02785;Dbxref=Genbank:WP_016191166.1;Name=WP_016191166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001602020.1;locus_tag=LU631_RS02785;product=hypothetical protein;protein_id=WP_016191166.1;transl_table=11 NZ_CP089940.1 RefSeq gene 540570 541418 . + . ID=gene-LU631_RS02790;Name=LU631_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02790;old_locus_tag=LU631_02790 NZ_CP089940.1 GeneMarkS-2+ CDS 540570 541418 . + 0 ID=cds-WP_016191165.1;Parent=gene-LU631_RS02790;Dbxref=Genbank:WP_016191165.1;Name=WP_016191165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02790;product=hypothetical protein;protein_id=WP_016191165.1;transl_table=11 NZ_CP089940.1 RefSeq gene 541411 542121 . + . ID=gene-LU631_RS02795;Name=LU631_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02795;old_locus_tag=LU631_02795 NZ_CP089940.1 Protein Homology CDS 541411 542121 . + 0 ID=cds-WP_016191164.1;Parent=gene-LU631_RS02795;Dbxref=Genbank:WP_016191164.1;Name=WP_016191164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001620615.1;locus_tag=LU631_RS02795;product=hypothetical protein;protein_id=WP_016191164.1;transl_table=11 NZ_CP089940.1 RefSeq gene 542118 542477 . + . ID=gene-LU631_RS02800;Name=LU631_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02800;old_locus_tag=LU631_02800 NZ_CP089940.1 Protein Homology CDS 542118 542477 . + 0 ID=cds-WP_016191163.1;Parent=gene-LU631_RS02800;Dbxref=Genbank:WP_016191163.1;Name=WP_016191163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001602023.1;locus_tag=LU631_RS02800;product=hypothetical protein;protein_id=WP_016191163.1;transl_table=11 NZ_CP089940.1 RefSeq gene 542474 543706 . + . ID=gene-LU631_RS02805;Name=LU631_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02805;old_locus_tag=LU631_02805 NZ_CP089940.1 Protein Homology CDS 542474 543706 . + 0 ID=cds-WP_016191162.1;Parent=gene-LU631_RS02805;Dbxref=Genbank:WP_016191162.1;Name=WP_016191162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000209684.1;locus_tag=LU631_RS02805;product=baseplate J/gp47 family protein;protein_id=WP_016191162.1;transl_table=11 NZ_CP089940.1 RefSeq gene 543703 544344 . + . ID=gene-LU631_RS02810;Name=LU631_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02810;old_locus_tag=LU631_02810 NZ_CP089940.1 Protein Homology CDS 543703 544344 . + 0 ID=cds-WP_016191161.1;Parent=gene-LU631_RS02810;Dbxref=Genbank:WP_016191161.1;Name=WP_016191161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001609815.1;locus_tag=LU631_RS02810;product=DUF2612 domain-containing protein;protein_id=WP_016191161.1;transl_table=11 NZ_CP089940.1 RefSeq gene 544345 545670 . + . ID=gene-LU631_RS02815;Name=LU631_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02815;old_locus_tag=LU631_02815 NZ_CP089940.1 Protein Homology CDS 544345 545670 . + 0 ID=cds-WP_016191160.1;Parent=gene-LU631_RS02815;Dbxref=Genbank:WP_016191160.1;Name=WP_016191160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001488238.1;locus_tag=LU631_RS02815;product=hypothetical protein;protein_id=WP_016191160.1;transl_table=11 NZ_CP089940.1 RefSeq gene 545670 546146 . + . ID=gene-LU631_RS02820;Name=LU631_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02820;old_locus_tag=LU631_02820 NZ_CP089940.1 GeneMarkS-2+ CDS 545670 546146 . + 0 ID=cds-WP_016191159.1;Parent=gene-LU631_RS02820;Dbxref=Genbank:WP_016191159.1;Name=WP_016191159.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02820;product=hypothetical protein;protein_id=WP_016191159.1;transl_table=11 NZ_CP089940.1 RefSeq gene 546447 547361 . + . ID=gene-LU631_RS02825;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=LU631_RS02825;old_locus_tag=LU631_02825 NZ_CP089940.1 Protein Homology CDS 546447 547361 . + 0 ID=cds-WP_016191158.1;Parent=gene-LU631_RS02825;Dbxref=Genbank:WP_016191158.1;Name=WP_016191158.1;Ontology_term=GO:0042779,GO:0016891;gbkey=CDS;gene=rnz;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-trailer cleavage|0042779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000419093.1;locus_tag=LU631_RS02825;product=ribonuclease Z;protein_id=WP_016191158.1;transl_table=11 NZ_CP089940.1 RefSeq gene 547401 548243 . - . ID=gene-LU631_RS02830;Name=LU631_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02830;old_locus_tag=LU631_02830 NZ_CP089940.1 Protein Homology CDS 547401 548243 . - 0 ID=cds-WP_016191157.1;Parent=gene-LU631_RS02830;Dbxref=Genbank:WP_016191157.1;Name=WP_016191157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417956.1;locus_tag=LU631_RS02830;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_016191157.1;transl_table=11 NZ_CP089940.1 RefSeq gene 548568 549305 . + . ID=gene-LU631_RS02835;Name=LU631_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02835;old_locus_tag=LU631_02835 NZ_CP089940.1 Protein Homology CDS 548568 549305 . + 0 ID=cds-WP_016191156.1;Parent=gene-LU631_RS02835;Dbxref=Genbank:WP_016191156.1;Name=WP_016191156.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010431262.1;locus_tag=LU631_RS02835;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=WP_016191156.1;transl_table=11 NZ_CP089940.1 RefSeq gene 549495 549734 . - . ID=gene-LU631_RS02840;Name=LU631_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02840;old_locus_tag=LU631_02840 NZ_CP089940.1 Protein Homology CDS 549495 549734 . - 0 ID=cds-WP_232426867.1;Parent=gene-LU631_RS02840;Dbxref=Genbank:WP_232426867.1;Name=WP_232426867.1;Ontology_term=GO:0071586,GO:0004222,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: protein motif:HMM:NF014566.2;locus_tag=LU631_RS02840;product=CPBP family glutamic-type intramembrane protease;protein_id=WP_232426867.1;transl_table=11 NZ_CP089940.1 RefSeq gene 550022 552070 . + . ID=gene-LU631_RS02845;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=LU631_RS02845;old_locus_tag=LU631_02845 NZ_CP089940.1 Protein Homology CDS 550022 552070 . + 0 ID=cds-WP_016191154.1;Parent=gene-LU631_RS02845;Dbxref=Genbank:WP_016191154.1;Name=WP_016191154.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160938.1;locus_tag=LU631_RS02845;product=oligopeptidase A;protein_id=WP_016191154.1;transl_table=11 NZ_CP089940.1 RefSeq gene 552067 552822 . + . ID=gene-LU631_RS02850;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=LU631_RS02850;old_locus_tag=LU631_02850 NZ_CP089940.1 Protein Homology CDS 552067 552822 . + 0 ID=cds-WP_016191153.1;Parent=gene-LU631_RS02850;Dbxref=Genbank:WP_016191153.1;Name=WP_016191153.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204312.1;locus_tag=LU631_RS02850;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_016191153.1;transl_table=11 NZ_CP089940.1 RefSeq gene 553028 553462 . - . ID=gene-LU631_RS02855;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=LU631_RS02855;old_locus_tag=LU631_02855 NZ_CP089940.1 Protein Homology CDS 553028 553462 . - 0 ID=cds-WP_016191152.1;Parent=gene-LU631_RS02855;Dbxref=Genbank:WP_016191152.1;Name=WP_016191152.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312394.1;locus_tag=LU631_RS02855;product=universal stress protein UspA;protein_id=WP_016191152.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 553683 554020 . + . ID=gene-LU631_RS02860;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=pseudogene;locus_tag=LU631_RS02860;old_locus_tag=LU631_02860;pseudo=true NZ_CP089940.1 Protein Homology CDS 553683 554020 . + 0 ID=cds-LU631_RS02860;Parent=gene-LU631_RS02860;Note=frameshifted%3B internal stop;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013510884.1;locus_tag=LU631_RS02860;product=universal stress protein UspB;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 554086 555585 . - . ID=gene-LU631_RS02865;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=LU631_RS02865;old_locus_tag=LU631_02865 NZ_CP089940.1 Protein Homology CDS 554086 555585 . - 0 ID=cds-WP_016191151.1;Parent=gene-LU631_RS02865;Dbxref=Genbank:WP_016191151.1;Name=WP_016191151.1;Ontology_term=GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000933250.1;locus_tag=LU631_RS02865;product=inorganic phosphate transporter PitA;protein_id=WP_016191151.1;transl_table=11 NZ_CP089940.1 RefSeq gene 555810 556994 . + . ID=gene-LU631_RS02870;Name=LU631_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02870;old_locus_tag=LU631_02870 NZ_CP089940.1 Protein Homology CDS 555810 556994 . + 0 ID=cds-WP_016191150.1;Parent=gene-LU631_RS02870;Dbxref=Genbank:WP_016191150.1;Name=WP_016191150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014604810.1;locus_tag=LU631_RS02870;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_016191150.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 557576 558355 . - . ID=gene-LU631_RS02875;Name=LU631_RS02875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS02875;old_locus_tag=LU631_02875;partial=true;pseudo=true;start_range=.,557576 NZ_CP089940.1 Protein Homology CDS 557576 558355 . - 0 ID=cds-LU631_RS02875;Parent=gene-LU631_RS02875;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS02875;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,557576;transl_table=11 NZ_CP089940.1 RefSeq gene 558670 559367 . + . ID=gene-LU631_RS02880;Name=LU631_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02880;old_locus_tag=LU631_02880 NZ_CP089940.1 Protein Homology CDS 558670 558919 . + 0 ID=cds-WP_233481979.1;Parent=gene-LU631_RS02880;Dbxref=Genbank:WP_233481979.1;Name=WP_233481979.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS02880;product=IS1 family transposase;protein_id=WP_233481979.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 558919 559367 . + 2 ID=cds-WP_233481979.1;Parent=gene-LU631_RS02880;Dbxref=Genbank:WP_233481979.1;Name=WP_233481979.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS02880;product=IS1 family transposase;protein_id=WP_233481979.1;transl_table=11 NZ_CP089940.1 RefSeq gene 560209 562989 . + . ID=gene-LU631_RS02885;Name=LU631_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02885;old_locus_tag=LU631_02885 NZ_CP089940.1 Protein Homology CDS 560209 562989 . + 0 ID=cds-WP_016191146.1;Parent=gene-LU631_RS02885;Dbxref=Genbank:WP_016191146.1;Name=WP_016191146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011410355.1;locus_tag=LU631_RS02885;product=inverse autotransporter beta domain-containing protein;protein_id=WP_016191146.1;transl_table=11 NZ_CP089940.1 RefSeq gene 563077 564129 . + . ID=gene-LU631_RS02890;Name=LU631_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02890;old_locus_tag=LU631_02890 NZ_CP089940.1 GeneMarkS-2+ CDS 563077 564129 . + 0 ID=cds-WP_016191145.1;Parent=gene-LU631_RS02890;Dbxref=Genbank:WP_016191145.1;Name=WP_016191145.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02890;product=hypothetical protein;protein_id=WP_016191145.1;transl_table=11 NZ_CP089940.1 RefSeq gene 564912 568286 . + . ID=gene-LU631_RS02895;Name=LU631_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02895;old_locus_tag=LU631_02895 NZ_CP089940.1 Protein Homology CDS 564912 568286 . + 0 ID=cds-WP_016191144.1;Parent=gene-LU631_RS02895;Dbxref=Genbank:WP_016191144.1;Name=WP_016191144.1;Ontology_term=GO:0046819,GO:0015474,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=autotransporter activity|0015474||IEA;go_process=protein secretion by the type V secretion system|0046819||IEA;inference=COORDINATES: protein motif:HMM:TIGR01414.1;locus_tag=LU631_RS02895;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_016191144.1;transl_table=11 NZ_CP089940.1 RefSeq gene 568485 570617 . + . ID=gene-LU631_RS02900;Name=LU631_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02900;old_locus_tag=LU631_02900 NZ_CP089940.1 Protein Homology CDS 568485 570617 . + 0 ID=cds-WP_016191143.1;Parent=gene-LU631_RS02900;Dbxref=Genbank:WP_016191143.1;Name=WP_016191143.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204294.1;locus_tag=LU631_RS02900;product=TonB-dependent siderophore receptor;protein_id=WP_016191143.1;transl_table=11 NZ_CP089940.1 RefSeq gene 570630 571733 . + . ID=gene-LU631_RS02905;Name=LU631_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02905;old_locus_tag=LU631_02905 NZ_CP089940.1 Protein Homology CDS 570630 571733 . + 0 ID=cds-WP_016191142.1;Parent=gene-LU631_RS02905;Dbxref=Genbank:WP_016191142.1;Name=WP_016191142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016536450.1;locus_tag=LU631_RS02905;product=ABC transporter substrate-binding protein;protein_id=WP_016191142.1;transl_table=11 NZ_CP089940.1 RefSeq gene 571818 573323 . - . ID=gene-LU631_RS02910;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=LU631_RS02910;old_locus_tag=LU631_02910 NZ_CP089940.1 Protein Homology CDS 571818 573323 . - 0 ID=cds-WP_016191141.1;Parent=gene-LU631_RS02910;Dbxref=Genbank:WP_016191141.1;Name=WP_016191141.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007760414.1;locus_tag=LU631_RS02910;product=glycine betaine/L-proline transporter ProP;protein_id=WP_016191141.1;transl_table=11 NZ_CP089940.1 RefSeq gene 573716 574045 . + . ID=gene-LU631_RS02915;Name=LU631_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02915;old_locus_tag=LU631_02915 NZ_CP089940.1 Protein Homology CDS 573716 574045 . + 0 ID=cds-WP_051124381.1;Parent=gene-LU631_RS02915;Dbxref=Genbank:WP_051124381.1;Name=WP_051124381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094295.1;locus_tag=LU631_RS02915;product=DHCW motif cupin fold protein;protein_id=WP_051124381.1;transl_table=11 NZ_CP089940.1 RefSeq gene 574306 575520 . - . ID=gene-LU631_RS02920;Name=LU631_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02920;old_locus_tag=LU631_02920 NZ_CP089940.1 Protein Homology CDS 574306 575520 . - 0 ID=cds-WP_046371879.1-4;Parent=gene-LU631_RS02920;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS02920;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 575529 575669 . - . ID=gene-LU631_RS02925;Name=LU631_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02925;old_locus_tag=LU631_02925 NZ_CP089940.1 GeneMarkS-2+ CDS 575529 575669 . - 0 ID=cds-WP_161796965.1-5;Parent=gene-LU631_RS02925;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02925;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 576090 576233 . + . ID=gene-LU631_RS02930;Name=LU631_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02930;old_locus_tag=LU631_02930 NZ_CP089940.1 GeneMarkS-2+ CDS 576090 576233 . + 0 ID=cds-WP_016191139.1;Parent=gene-LU631_RS02930;Dbxref=Genbank:WP_016191139.1;Name=WP_016191139.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02930;product=hypothetical protein;protein_id=WP_016191139.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 576236 577425 . + . ID=gene-LU631_RS02935;Name=LU631_RS02935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS02935;old_locus_tag=LU631_02935;pseudo=true NZ_CP089940.1 Protein Homology CDS 576236 577425 . + 0 ID=cds-LU631_RS02935;Parent=gene-LU631_RS02935;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120658.1;locus_tag=LU631_RS02935;product=baseplate J/gp47 family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 577422 578075 . + . ID=gene-LU631_RS02940;Name=LU631_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02940;old_locus_tag=LU631_02940 NZ_CP089940.1 Protein Homology CDS 577422 578075 . + 0 ID=cds-WP_016191138.1;Parent=gene-LU631_RS02940;Dbxref=Genbank:WP_016191138.1;Name=WP_016191138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409961.1;locus_tag=LU631_RS02940;product=DUF2612 domain-containing protein;protein_id=WP_016191138.1;transl_table=11 NZ_CP089940.1 RefSeq gene 578151 578348 . + . ID=gene-LU631_RS02945;Name=LU631_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02945;old_locus_tag=LU631_02945 NZ_CP089940.1 GeneMarkS-2+ CDS 578151 578348 . + 0 ID=cds-WP_016191137.1;Parent=gene-LU631_RS02945;Dbxref=Genbank:WP_016191137.1;Name=WP_016191137.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02945;product=hypothetical protein;protein_id=WP_016191137.1;transl_table=11 NZ_CP089940.1 RefSeq gene 578486 579526 . + . ID=gene-LU631_RS02950;Name=LU631_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02950;old_locus_tag=LU631_02950 NZ_CP089940.1 Protein Homology CDS 578486 579526 . + 0 ID=cds-WP_046371818.1;Parent=gene-LU631_RS02950;Dbxref=Genbank:WP_046371818.1;Name=WP_046371818.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS02950;product=IS481 family transposase;protein_id=WP_046371818.1;transl_table=11 NZ_CP089940.1 RefSeq gene 579696 580067 . + . ID=gene-LU631_RS02955;Name=LU631_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02955;old_locus_tag=LU631_02955 NZ_CP089940.1 Protein Homology CDS 579696 580067 . + 0 ID=cds-WP_052734724.1;Parent=gene-LU631_RS02955;Dbxref=Genbank:WP_052734724.1;Name=WP_052734724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009112593.1;locus_tag=LU631_RS02955;product=DUF2335 domain-containing protein;protein_id=WP_052734724.1;transl_table=11 NZ_CP089940.1 RefSeq gene 580187 581509 . + . ID=gene-LU631_RS02960;Name=LU631_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02960;old_locus_tag=LU631_02960 NZ_CP089940.1 Protein Homology CDS 580187 581509 . + 0 ID=cds-WP_233481980.1;Parent=gene-LU631_RS02960;Dbxref=Genbank:WP_233481980.1;Name=WP_233481980.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013317037.1;locus_tag=LU631_RS02960;product=IS4 family transposase;protein_id=WP_233481980.1;transl_table=11 NZ_CP089940.1 RefSeq gene 581917 582546 . - . ID=gene-LU631_RS02965;Name=LU631_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02965;old_locus_tag=LU631_02965 NZ_CP089940.1 Protein Homology CDS 581917 582546 . - 0 ID=cds-WP_016191136.1;Parent=gene-LU631_RS02965;Dbxref=Genbank:WP_016191136.1;Name=WP_016191136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303797.1;locus_tag=LU631_RS02965;product=XRE family transcriptional regulator;protein_id=WP_016191136.1;transl_table=11 NZ_CP089940.1 RefSeq gene 582684 582890 . + . ID=gene-LU631_RS02970;Name=LU631_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02970;old_locus_tag=LU631_02970 NZ_CP089940.1 Protein Homology CDS 582684 582890 . + 0 ID=cds-WP_016191135.1;Parent=gene-LU631_RS02970;Dbxref=Genbank:WP_016191135.1;Name=WP_016191135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247477.1;locus_tag=LU631_RS02970;product=helix-turn-helix transcriptional regulator;protein_id=WP_016191135.1;transl_table=11 NZ_CP089940.1 RefSeq gene 582894 585050 . + . ID=gene-LU631_RS02975;Name=LU631_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02975;old_locus_tag=LU631_02975 NZ_CP089940.1 Protein Homology CDS 582894 585050 . + 0 ID=cds-WP_016191134.1;Parent=gene-LU631_RS02975;Dbxref=Genbank:WP_016191134.1;Name=WP_016191134.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024872.2;locus_tag=LU631_RS02975;product=AAA family ATPase;protein_id=WP_016191134.1;transl_table=11 NZ_CP089940.1 RefSeq gene 585097 585264 . - . ID=gene-LU631_RS02980;Name=LU631_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02980;old_locus_tag=LU631_02980 NZ_CP089940.1 GeneMarkS-2+ CDS 585097 585264 . - 0 ID=cds-WP_157275232.1;Parent=gene-LU631_RS02980;Dbxref=Genbank:WP_157275232.1;Name=WP_157275232.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS02980;product=hypothetical protein;protein_id=WP_157275232.1;transl_table=11 NZ_CP089940.1 RefSeq gene 585378 586112 . + . ID=gene-LU631_RS02985;Name=LU631_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02985;old_locus_tag=LU631_02985 NZ_CP089940.1 Protein Homology CDS 585378 586112 . + 0 ID=cds-WP_016191133.1;Parent=gene-LU631_RS02985;Dbxref=Genbank:WP_016191133.1;Name=WP_016191133.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017832.2;locus_tag=LU631_RS02985;product=competence protein CoiA family protein;protein_id=WP_016191133.1;transl_table=11 NZ_CP089940.1 RefSeq gene 586187 586612 . + . ID=gene-LU631_RS02990;Name=LU631_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02990;old_locus_tag=LU631_02990 NZ_CP089940.1 Protein Homology CDS 586187 586612 . + 0 ID=cds-WP_016191132.1;Parent=gene-LU631_RS02990;Dbxref=Genbank:WP_016191132.1;Name=WP_016191132.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303801.1;locus_tag=LU631_RS02990;product=antiterminator Q family protein;protein_id=WP_016191132.1;transl_table=11 NZ_CP089940.1 RefSeq gene 586990 587298 . + . ID=gene-LU631_RS02995;Name=LU631_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS02995;old_locus_tag=LU631_02995 NZ_CP089940.1 Protein Homology CDS 586990 587298 . + 0 ID=cds-WP_046372149.1;Parent=gene-LU631_RS02995;Dbxref=Genbank:WP_046372149.1;Name=WP_046372149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814359.1;locus_tag=LU631_RS02995;product=phage holin family protein;protein_id=WP_046372149.1;transl_table=11 NZ_CP089940.1 RefSeq gene 587288 587827 . + . ID=gene-LU631_RS03000;Name=LU631_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03000;old_locus_tag=LU631_03000 NZ_CP089940.1 Protein Homology CDS 587288 587827 . + 0 ID=cds-WP_016193236.1;Parent=gene-LU631_RS03000;Dbxref=Genbank:WP_016193236.1;Name=WP_016193236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001504514.1;locus_tag=LU631_RS03000;product=NUMOD4 motif-containing HNH endonuclease;protein_id=WP_016193236.1;transl_table=11 NZ_CP089940.1 RefSeq gene 587824 588249 . + . ID=gene-LU631_RS03005;Name=LU631_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03005;old_locus_tag=LU631_03005 NZ_CP089940.1 Protein Homology CDS 587824 588249 . + 0 ID=cds-WP_016193237.1;Parent=gene-LU631_RS03005;Dbxref=Genbank:WP_016193237.1;Name=WP_016193237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117831.1;locus_tag=LU631_RS03005;product=lysozyme;protein_id=WP_016193237.1;transl_table=11 NZ_CP089940.1 RefSeq gene 588442 588639 . + . ID=gene-LU631_RS03010;Name=LU631_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03010;old_locus_tag=LU631_03010 NZ_CP089940.1 Protein Homology CDS 588442 588639 . + 0 ID=cds-WP_071598980.1;Parent=gene-LU631_RS03010;Dbxref=Genbank:WP_071598980.1;Name=WP_071598980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012578895.1;locus_tag=LU631_RS03010;product=Rz1 family lipoprotein;protein_id=WP_071598980.1;transl_table=11 NZ_CP089940.1 RefSeq gene 588735 589505 . + . ID=gene-LU631_RS03015;Name=LU631_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03015;old_locus_tag=LU631_03015 NZ_CP089940.1 GeneMarkS-2+ CDS 588735 589505 . + 0 ID=cds-WP_233481981.1;Parent=gene-LU631_RS03015;Dbxref=Genbank:WP_233481981.1;Name=WP_233481981.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03015;product=hypothetical protein;protein_id=WP_233481981.1;transl_table=11 NZ_CP089940.1 RefSeq gene 589515 589943 . + . ID=gene-LU631_RS03020;Name=LU631_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03020;old_locus_tag=LU631_03020 NZ_CP089940.1 GeneMarkS-2+ CDS 589515 589943 . + 0 ID=cds-WP_046372151.1;Parent=gene-LU631_RS03020;Dbxref=Genbank:WP_046372151.1;Name=WP_046372151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03020;product=hypothetical protein;protein_id=WP_046372151.1;transl_table=11 NZ_CP089940.1 RefSeq gene 589962 590216 . + . ID=gene-LU631_RS03025;Name=LU631_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03025;old_locus_tag=LU631_03025 NZ_CP089940.1 GeneMarkS-2+ CDS 589962 590216 . + 0 ID=cds-WP_046372152.1;Parent=gene-LU631_RS03025;Dbxref=Genbank:WP_046372152.1;Name=WP_046372152.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03025;product=hypothetical protein;protein_id=WP_046372152.1;transl_table=11 NZ_CP089940.1 RefSeq gene 590222 590704 . + . ID=gene-LU631_RS03030;Name=LU631_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03030;old_locus_tag=LU631_03030 NZ_CP089940.1 Protein Homology CDS 590222 590704 . + 0 ID=cds-WP_046372153.1;Parent=gene-LU631_RS03030;Dbxref=Genbank:WP_046372153.1;Name=WP_046372153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729926.1;locus_tag=LU631_RS03030;product=DNA-packaging protein;protein_id=WP_046372153.1;transl_table=11 NZ_CP089940.1 RefSeq gene 590688 592181 . + . ID=gene-LU631_RS03035;Name=LU631_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03035;old_locus_tag=LU631_03035 NZ_CP089940.1 Protein Homology CDS 590688 592181 . + 0 ID=cds-WP_046372154.1;Parent=gene-LU631_RS03035;Dbxref=Genbank:WP_046372154.1;Name=WP_046372154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813169.1;locus_tag=LU631_RS03035;product=terminase large subunit;protein_id=WP_046372154.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 592181 594209 . + . ID=gene-LU631_RS03040;Name=LU631_RS03040;end_range=594209,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03040;old_locus_tag=LU631_03040;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 592181 594209 . + 0 ID=cds-LU631_RS03040;Parent=gene-LU631_RS03040;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=594209,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813168.1;locus_tag=LU631_RS03040;partial=true;product=portal protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 594310 595216 . + . ID=gene-LU631_RS03045;Name=LU631_RS03045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03045;old_locus_tag=LU631_03045;pseudo=true NZ_CP089940.1 Protein Homology CDS 594310 595216 . + 0 ID=cds-LU631_RS03045;Parent=gene-LU631_RS03045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193239.1;locus_tag=LU631_RS03045;product=scaffolding protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 595228 596523 . + . ID=gene-LU631_RS03050;Name=LU631_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03050;old_locus_tag=LU631_03050 NZ_CP089940.1 Protein Homology CDS 595228 596523 . + 0 ID=cds-WP_016193240.1;Parent=gene-LU631_RS03050;Dbxref=Genbank:WP_016193240.1;Name=WP_016193240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907908.1;locus_tag=LU631_RS03050;product=hypothetical protein;protein_id=WP_016193240.1;transl_table=11 NZ_CP089940.1 RefSeq gene 596565 596915 . + . ID=gene-LU631_RS03055;Name=LU631_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03055;old_locus_tag=LU631_03055 NZ_CP089940.1 Protein Homology CDS 596565 596915 . + 0 ID=cds-WP_072052850.1;Parent=gene-LU631_RS03055;Dbxref=Genbank:WP_072052850.1;Name=WP_072052850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001383366.1;locus_tag=LU631_RS03055;product=hypothetical protein;protein_id=WP_072052850.1;transl_table=11 NZ_CP089940.1 RefSeq gene 596899 597384 . + . ID=gene-LU631_RS03060;Name=LU631_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03060;old_locus_tag=LU631_03060 NZ_CP089940.1 Protein Homology CDS 596899 597384 . + 0 ID=cds-WP_046372155.1;Parent=gene-LU631_RS03060;Dbxref=Genbank:WP_046372155.1;Name=WP_046372155.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023080.2;locus_tag=LU631_RS03060;product=hypothetical protein;protein_id=WP_046372155.1;transl_table=11 NZ_CP089940.1 RefSeq gene 597356 598885 . + . ID=gene-LU631_RS03065;Name=LU631_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03065;old_locus_tag=LU631_03065 NZ_CP089940.1 Protein Homology CDS 597356 598885 . + 0 ID=cds-WP_267958442.1;Parent=gene-LU631_RS03065;Dbxref=Genbank:WP_267958442.1;Name=WP_267958442.1;Ontology_term=GO:0019073;gbkey=CDS;go_process=viral DNA genome packaging|0019073||IEA;inference=COORDINATES: protein motif:HMM:NF022584.2;locus_tag=LU631_RS03065;product=packaged DNA stabilization protein;protein_id=WP_267958442.1;transl_table=11 NZ_CP089940.1 RefSeq gene 598818 599132 . + . ID=gene-LU631_RS25970;Name=LU631_RS25970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25970 NZ_CP089940.1 Protein Homology CDS 598818 599132 . + 0 ID=cds-WP_267958443.1;Parent=gene-LU631_RS25970;Dbxref=Genbank:WP_267958443.1;Name=WP_267958443.1;Ontology_term=GO:0019073;gbkey=CDS;go_process=viral DNA genome packaging|0019073||IEA;inference=COORDINATES: protein motif:HMM:NF022584.2;locus_tag=LU631_RS25970;product=packaged DNA stabilization protein;protein_id=WP_267958443.1;transl_table=11 NZ_CP089940.1 RefSeq gene 599125 599619 . + . ID=gene-LU631_RS03070;Name=LU631_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03070;old_locus_tag=LU631_03070 NZ_CP089940.1 Protein Homology CDS 599125 599619 . + 0 ID=cds-WP_046372156.1;Parent=gene-LU631_RS03070;Dbxref=Genbank:WP_046372156.1;Name=WP_046372156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749455.1;locus_tag=LU631_RS03070;product=hypothetical protein;protein_id=WP_046372156.1;transl_table=11 NZ_CP089940.1 RefSeq gene 599622 599984 . + . ID=gene-LU631_RS03075;Name=LU631_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03075;old_locus_tag=LU631_03075 NZ_CP089940.1 GeneMarkS-2+ CDS 599622 599984 . + 0 ID=cds-WP_020323013.1;Parent=gene-LU631_RS03075;Dbxref=Genbank:WP_020323013.1;Name=WP_020323013.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03075;product=hypothetical protein;protein_id=WP_020323013.1;transl_table=11 NZ_CP089940.1 RefSeq gene 599986 600570 . + . ID=gene-LU631_RS03080;Name=LU631_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03080;old_locus_tag=LU631_03080 NZ_CP089940.1 Protein Homology CDS 599986 600570 . + 0 ID=cds-WP_020323012.1;Parent=gene-LU631_RS03080;Dbxref=Genbank:WP_020323012.1;Name=WP_020323012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191788.1;locus_tag=LU631_RS03080;product=hypothetical protein;protein_id=WP_020323012.1;transl_table=11 NZ_CP089940.1 RefSeq gene 600570 601859 . + . ID=gene-LU631_RS03085;Name=LU631_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03085;old_locus_tag=LU631_03085 NZ_CP089940.1 Protein Homology CDS 600570 601859 . + 0 ID=cds-WP_020323011.1;Parent=gene-LU631_RS03085;Dbxref=Genbank:WP_020323011.1;Name=WP_020323011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191789.1;locus_tag=LU631_RS03085;product=phage DNA ejection protein;protein_id=WP_020323011.1;transl_table=11 NZ_CP089940.1 RefSeq gene 601859 603985 . + . ID=gene-LU631_RS03090;Name=LU631_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03090;old_locus_tag=LU631_03090 NZ_CP089940.1 Protein Homology CDS 601859 603985 . + 0 ID=cds-WP_020323010.1;Parent=gene-LU631_RS03090;Dbxref=Genbank:WP_020323010.1;Name=WP_020323010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005759981.1;locus_tag=LU631_RS03090;product=hypothetical protein;protein_id=WP_020323010.1;transl_table=11 NZ_CP089940.1 RefSeq gene 604700 605497 . - . ID=gene-LU631_RS03095;Name=LU631_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03095;old_locus_tag=LU631_03095 NZ_CP089940.1 Protein Homology CDS 604700 605497 . - 0 ID=cds-WP_020323008.1;Parent=gene-LU631_RS03095;Dbxref=Genbank:WP_020323008.1;Name=WP_020323008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001028068.1;locus_tag=LU631_RS03095;product=BRO family protein;protein_id=WP_020323008.1;transl_table=11 NZ_CP089940.1 RefSeq gene 605553 605699 . + . ID=gene-LU631_RS03100;Name=LU631_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03100;old_locus_tag=LU631_03100 NZ_CP089940.1 Protein Homology CDS 605553 605699 . + 0 ID=cds-WP_198292519.1;Parent=gene-LU631_RS03100;Dbxref=Genbank:WP_198292519.1;Name=WP_198292519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001421228.1;locus_tag=LU631_RS03100;product=hypothetical protein;protein_id=WP_198292519.1;transl_table=11 NZ_CP089940.1 RefSeq gene 605845 607116 . + . ID=gene-LU631_RS03105;Name=LU631_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03105;old_locus_tag=LU631_03105 NZ_CP089940.1 Protein Homology CDS 605845 607116 . + 0 ID=cds-WP_052734726.1;Parent=gene-LU631_RS03105;Dbxref=Genbank:WP_052734726.1;Name=WP_052734726.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020577.2;locus_tag=LU631_RS03105;product=phage tailspike protein;protein_id=WP_052734726.1;transl_table=11 NZ_CP089940.1 RefSeq gene 607146 607472 . - . ID=gene-LU631_RS03110;Name=LU631_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03110;old_locus_tag=LU631_03110 NZ_CP089940.1 Protein Homology CDS 607146 607472 . - 0 ID=cds-WP_016191793.1;Parent=gene-LU631_RS03110;Dbxref=Genbank:WP_016191793.1;Name=WP_016191793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007763609.1;locus_tag=LU631_RS03110;product=DUF1493 family protein;protein_id=WP_016191793.1;transl_table=11 NZ_CP089940.1 RefSeq gene 607466 607912 . - . ID=gene-LU631_RS03115;Name=LU631_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03115;old_locus_tag=LU631_03115 NZ_CP089940.1 Protein Homology CDS 607466 607912 . - 0 ID=cds-WP_020323001.1;Parent=gene-LU631_RS03115;Dbxref=Genbank:WP_020323001.1;Name=WP_020323001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078279.1;locus_tag=LU631_RS03115;product=hypothetical protein;protein_id=WP_020323001.1;transl_table=11 NZ_CP089940.1 RefSeq gene 607978 609075 . - . ID=gene-LU631_RS03120;Name=LU631_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03120;old_locus_tag=LU631_03120 NZ_CP089940.1 Protein Homology CDS 607978 609075 . - 0 ID=cds-WP_020323000.1;Parent=gene-LU631_RS03120;Dbxref=Genbank:WP_020323000.1;Name=WP_020323000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619049.1;locus_tag=LU631_RS03120;product=site-specific integrase;protein_id=WP_020323000.1;transl_table=11 NZ_CP089940.1 RefSeq gene 609165 610214 . + . ID=gene-LU631_RS03125;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=LU631_RS03125;old_locus_tag=LU631_03125 NZ_CP089940.1 Protein Homology CDS 609165 610214 . + 0 ID=cds-WP_020322999.1;Parent=gene-LU631_RS03125;Dbxref=Genbank:WP_020322999.1;Name=WP_020322999.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160445.1;locus_tag=LU631_RS03125;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_020322999.1;transl_table=11 NZ_CP089940.1 RefSeq gene 610874 611571 . + . ID=gene-LU631_RS03130;Name=LU631_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03130;old_locus_tag=LU631_03130 NZ_CP089940.1 Protein Homology CDS 610874 611135 . + 0 ID=cds-WP_233481982.1;Parent=gene-LU631_RS03130;Dbxref=Genbank:WP_233481982.1;Name=WP_233481982.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS03130;product=IS1 family transposase;protein_id=WP_233481982.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 611135 611571 . + 2 ID=cds-WP_233481982.1;Parent=gene-LU631_RS03130;Dbxref=Genbank:WP_233481982.1;Name=WP_233481982.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS03130;product=IS1 family transposase;protein_id=WP_233481982.1;transl_table=11 NZ_CP089940.1 RefSeq gene 612293 612502 . + . ID=gene-LU631_RS03135;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=LU631_RS03135;old_locus_tag=LU631_03135 NZ_CP089940.1 Protein Homology CDS 612293 612502 . + 0 ID=cds-WP_020322997.1;Parent=gene-LU631_RS03135;Dbxref=Genbank:WP_020322997.1;Name=WP_020322997.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869694.1;locus_tag=LU631_RS03135;product=envelope stress response protein PspG;protein_id=WP_020322997.1;transl_table=11 NZ_CP089940.1 RefSeq gene 612746 613726 . - . ID=gene-LU631_RS03140;Name=LU631_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03140;old_locus_tag=LU631_03140 NZ_CP089940.1 Protein Homology CDS 612746 613726 . - 0 ID=cds-WP_020322995.1;Parent=gene-LU631_RS03140;Dbxref=Genbank:WP_020322995.1;Name=WP_020322995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007702297.1;locus_tag=LU631_RS03140;product=quinone oxidoreductase;protein_id=WP_020322995.1;transl_table=11 NZ_CP089940.1 RefSeq gene 613828 615243 . + . ID=gene-LU631_RS03145;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=LU631_RS03145;old_locus_tag=LU631_03145 NZ_CP089940.1 Protein Homology CDS 613828 615243 . + 0 ID=cds-WP_020322994.1;Parent=gene-LU631_RS03145;Dbxref=Genbank:WP_020322994.1;Name=WP_020322994.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539604.1;locus_tag=LU631_RS03145;product=replicative DNA helicase;protein_id=WP_020322994.1;transl_table=11 NZ_CP089940.1 RefSeq gene 615336 616033 . + . ID=gene-LU631_RS03150;Name=LU631_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03150;old_locus_tag=LU631_03150 NZ_CP089940.1 Protein Homology CDS 615336 615585 . + 0 ID=cds-WP_233481983.1;Parent=gene-LU631_RS03150;Dbxref=Genbank:WP_233481983.1;Name=WP_233481983.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS03150;product=IS1 family transposase;protein_id=WP_233481983.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 615585 616033 . + 2 ID=cds-WP_233481983.1;Parent=gene-LU631_RS03150;Dbxref=Genbank:WP_233481983.1;Name=WP_233481983.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS03150;product=IS1 family transposase;protein_id=WP_233481983.1;transl_table=11 NZ_CP089940.1 RefSeq gene 616311 616811 . + . ID=gene-LU631_RS03155;Name=LU631_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03155;old_locus_tag=LU631_03155 NZ_CP089940.1 GeneMarkS-2+ CDS 616311 616811 . + 0 ID=cds-WP_020322993.1;Parent=gene-LU631_RS03155;Dbxref=Genbank:WP_020322993.1;Name=WP_020322993.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03155;product=exochitinase;protein_id=WP_020322993.1;transl_table=11 NZ_CP089940.1 RefSeq gene 616963 618882 . + . ID=gene-LU631_RS03160;Name=LU631_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03160;old_locus_tag=LU631_03160 NZ_CP089940.1 Protein Homology CDS 616963 618882 . + 0 ID=cds-WP_020322992.1;Parent=gene-LU631_RS03160;Dbxref=Genbank:WP_020322992.1;Name=WP_020322992.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012311.2;locus_tag=LU631_RS03160;product=S8 family serine peptidase;protein_id=WP_020322992.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 619354 619759 . + . ID=gene-LU631_RS03165;Name=LU631_RS03165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03165;old_locus_tag=LU631_03165;pseudo=true NZ_CP089940.1 Protein Homology CDS 619354 619759 . + 0 ID=cds-LU631_RS03165;Parent=gene-LU631_RS03165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008926607.1;locus_tag=LU631_RS03165;product=Lrp/AsnC family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 619929 620366 . + . ID=gene-LU631_RS03170;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS03170;old_locus_tag=LU631_03170 NZ_CP089940.1 Protein Homology CDS 619929 620366 . + 0 ID=cds-WP_046372172.1;Parent=gene-LU631_RS03170;Dbxref=Genbank:WP_046372172.1;Name=WP_046372172.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS03170;product=IS200/IS605 family transposase;protein_id=WP_046372172.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 620651 621257 . + . ID=gene-LU631_RS03175;Name=LU631_RS03175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03175;old_locus_tag=LU631_03175;pseudo=true NZ_CP089940.1 Protein Homology CDS 620651 621257 . + 0 ID=cds-LU631_RS03175;Parent=gene-LU631_RS03175;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009092605.1;locus_tag=LU631_RS03175;product=YitT family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 621316 622509 . + . ID=gene-LU631_RS03180;Name=LU631_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03180;old_locus_tag=LU631_03180 NZ_CP089940.1 Protein Homology CDS 621316 622509 . + 0 ID=cds-WP_020322990.1;Parent=gene-LU631_RS03180;Dbxref=Genbank:WP_020322990.1;Name=WP_020322990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418478.1;locus_tag=LU631_RS03180;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=WP_020322990.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 622810 623222 . + . ID=gene-LU631_RS03185;Name=LU631_RS03185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03185;old_locus_tag=LU631_03185;pseudo=true NZ_CP089940.1 Protein Homology CDS 622810 623222 . + 0 ID=cds-LU631_RS03185;Parent=gene-LU631_RS03185;Note=frameshifted;Ontology_term=GO:0008150,GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206303.1;locus_tag=LU631_RS03185;product=secondary thiamine-phosphate synthase enzyme YjbQ;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 623260 623560 . + . ID=gene-LU631_RS03190;Name=LU631_RS03190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03190;old_locus_tag=LU631_03190;pseudo=true NZ_CP089940.1 Protein Homology CDS 623260 623560 . + 0 ID=cds-LU631_RS03190;Parent=gene-LU631_RS03190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200359.1;locus_tag=LU631_RS03190;product=MmcQ/YjbR family DNA-binding protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 623838 624890 . - . ID=gene-LU631_RS03195;Name=LU631_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03195;old_locus_tag=LU631_03195 NZ_CP089940.1 Protein Homology CDS 623838 624890 . - 0 ID=cds-WP_020322986.1;Parent=gene-LU631_RS03195;Dbxref=Genbank:WP_020322986.1;Name=WP_020322986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105658.1;locus_tag=LU631_RS03195;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_020322986.1;transl_table=11 NZ_CP089940.1 RefSeq gene 625253 628078 . - . ID=gene-LU631_RS03200;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=LU631_RS03200;old_locus_tag=LU631_03200 NZ_CP089940.1 Protein Homology CDS 625253 628078 . - 0 ID=cds-WP_020322985.1;Parent=gene-LU631_RS03200;Dbxref=Genbank:WP_020322985.1;Name=WP_020322985.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224582.1;locus_tag=LU631_RS03200;product=excinuclease ABC subunit UvrA;protein_id=WP_020322985.1;transl_table=11 NZ_CP089940.1 RefSeq gene 628381 628917 . + . ID=gene-LU631_RS03205;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=LU631_RS03205;old_locus_tag=LU631_03205 NZ_CP089940.1 Protein Homology CDS 628381 628917 . + 0 ID=cds-WP_020322984.1;Parent=gene-LU631_RS03205;Dbxref=Genbank:WP_020322984.1;Name=WP_020322984.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168322.1;locus_tag=LU631_RS03205;product=single-stranded DNA-binding protein SSB1;protein_id=WP_020322984.1;transl_table=11 NZ_CP089940.1 RefSeq gene 629481 630065 . + . ID=gene-LU631_RS25975;Name=LU631_RS25975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25975 NZ_CP089940.1 Protein Homology CDS 629481 630065 . + 0 ID=cds-WP_020322983.1;Parent=gene-LU631_RS25975;Dbxref=Genbank:WP_020322983.1;Name=WP_020322983.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012307.2;locus_tag=LU631_RS25975;product=reverse transcriptase domain-containing protein;protein_id=WP_020322983.1;transl_table=11 NZ_CP089940.1 RefSeq gene 629998 630591 . + . ID=gene-LU631_RS25980;Name=LU631_RS25980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25980 NZ_CP089940.1 Protein Homology CDS 629998 630591 . + 0 ID=cds-WP_198292518.1;Parent=gene-LU631_RS25980;Dbxref=Genbank:WP_198292518.1;Name=WP_198292518.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012307.2;locus_tag=LU631_RS25980;product=reverse transcriptase domain-containing protein;protein_id=WP_198292518.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 630702 631911 . + . ID=gene-LU631_RS03215;Name=LU631_RS03215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03215;old_locus_tag=LU631_03215;pseudo=true NZ_CP089940.1 Protein Homology CDS 630702 631911 . + 0 ID=cds-LU631_RS03215;Parent=gene-LU631_RS03215;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS03215;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 631996 633320 . + . ID=gene-LU631_RS03220;Name=LU631_RS03220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03220;old_locus_tag=LU631_03220;pseudo=true NZ_CP089940.1 Protein Homology CDS 631996 633320 . + 0 ID=cds-LU631_RS03220;Parent=gene-LU631_RS03220;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS03220;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 633696 633920 . - . ID=gene-LU631_RS03225;Name=LU631_RS03225;end_range=633920,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03225;old_locus_tag=LU631_03225;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 633696 633920 . - 0 ID=cds-LU631_RS03225;Parent=gene-LU631_RS03225;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=633920,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS03225;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 633979 635019 . - . ID=gene-LU631_RS03230;Name=LU631_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03230;old_locus_tag=LU631_03230 NZ_CP089940.1 Protein Homology CDS 633979 635019 . - 0 ID=cds-WP_046371791.1-2;Parent=gene-LU631_RS03230;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS03230;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 635120 636114 . - . ID=gene-LU631_RS03235;Name=LU631_RS03235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03235;old_locus_tag=LU631_03235;partial=true;pseudo=true;start_range=.,635120 NZ_CP089940.1 Protein Homology CDS 635120 636114 . - 0 ID=cds-LU631_RS03235;Parent=gene-LU631_RS03235;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU631_RS03235;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,635120;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 636543 637190 . + . ID=gene-LU631_RS03240;Name=LU631_RS03240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03240;old_locus_tag=LU631_03240;pseudo=true NZ_CP089940.1 Protein Homology CDS 636543 637190 . + 0 ID=cds-LU631_RS03240;Parent=gene-LU631_RS03240;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=LU631_RS03240;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 637346 637543 . + . ID=gene-LU631_RS03245;Name=LU631_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03245;old_locus_tag=LU631_03245 NZ_CP089940.1 GeneMarkS-2+ CDS 637346 637543 . + 0 ID=cds-WP_020322980.1;Parent=gene-LU631_RS03245;Dbxref=Genbank:WP_020322980.1;Name=WP_020322980.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03245;product=amidohydrolase;protein_id=WP_020322980.1;transl_table=11 NZ_CP089940.1 RefSeq gene 637639 638127 . + . ID=gene-LU631_RS03250;Name=LU631_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03250;old_locus_tag=LU631_03250 NZ_CP089940.1 GeneMarkS-2+ CDS 637639 638127 . + 0 ID=cds-WP_051124368.1;Parent=gene-LU631_RS03250;Dbxref=Genbank:WP_051124368.1;Name=WP_051124368.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03250;product=hypothetical protein;protein_id=WP_051124368.1;transl_table=11 NZ_CP089940.1 RefSeq gene 638120 638272 . + . ID=gene-LU631_RS03255;Name=LU631_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03255;old_locus_tag=LU631_03255 NZ_CP089940.1 GeneMarkS-2+ CDS 638120 638272 . + 0 ID=cds-WP_161796994.1;Parent=gene-LU631_RS03255;Dbxref=Genbank:WP_161796994.1;Name=WP_161796994.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03255;product=alpha/beta hydrolase;protein_id=WP_161796994.1;transl_table=11 NZ_CP089940.1 RefSeq gene 638405 638851 . + . ID=gene-LU631_RS03260;Name=LU631_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03260;old_locus_tag=LU631_03260 NZ_CP089940.1 Protein Homology CDS 638405 638851 . + 0 ID=cds-WP_020322979.1;Parent=gene-LU631_RS03260;Dbxref=Genbank:WP_020322979.1;Name=WP_020322979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442778.1;locus_tag=LU631_RS03260;product=DUF3828 domain-containing protein;protein_id=WP_020322979.1;transl_table=11 NZ_CP089940.1 RefSeq gene 638848 639039 . - . ID=gene-LU631_RS25985;Name=LU631_RS25985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25985 NZ_CP089940.1 Protein Homology CDS 638848 639039 . - 0 ID=cds-WP_252120248.1;Parent=gene-LU631_RS25985;Dbxref=Genbank:WP_252120248.1;Name=WP_252120248.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016293.2;locus_tag=LU631_RS25985;product=DUF535 family protein;protein_id=WP_252120248.1;transl_table=11 NZ_CP089940.1 RefSeq gene 639051 639143 . - . ID=gene-LU631_RS03265;Name=LU631_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03265;old_locus_tag=LU631_03265 NZ_CP089940.1 Protein Homology CDS 639051 639143 . - 0 ID=cds-WP_233479413.1;Parent=gene-LU631_RS03265;Dbxref=Genbank:WP_233479413.1;Name=WP_233479413.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016293.2;locus_tag=LU631_RS03265;product=VirK/YbjX family protein;protein_id=WP_233479413.1;transl_table=11 NZ_CP089940.1 RefSeq gene 639122 639460 . - . ID=gene-LU631_RS03270;Name=LU631_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03270;old_locus_tag=LU631_03270 NZ_CP089940.1 Protein Homology CDS 639122 639460 . - 0 ID=cds-WP_051124367.1;Parent=gene-LU631_RS03270;Dbxref=Genbank:WP_051124367.1;Name=WP_051124367.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016293.2;locus_tag=LU631_RS03270;product=DUF535 family protein;protein_id=WP_051124367.1;transl_table=11 NZ_CP089940.1 RefSeq gene 640490 641704 . - . ID=gene-LU631_RS03275;Name=LU631_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03275;old_locus_tag=LU631_03275 NZ_CP089940.1 Protein Homology CDS 640490 641704 . - 0 ID=cds-WP_046371879.1-5;Parent=gene-LU631_RS03275;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS03275;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 641713 641853 . - . ID=gene-LU631_RS03280;Name=LU631_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03280;old_locus_tag=LU631_03280 NZ_CP089940.1 GeneMarkS-2+ CDS 641713 641853 . - 0 ID=cds-WP_161796965.1-6;Parent=gene-LU631_RS03280;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03280;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 643516 643911 . - . ID=gene-LU631_RS03285;Name=LU631_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03285;old_locus_tag=LU631_03285 NZ_CP089940.1 Protein Homology CDS 643516 643911 . - 0 ID=cds-WP_020322977.1;Parent=gene-LU631_RS03285;Dbxref=Genbank:WP_020322977.1;Name=WP_020322977.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013677.2;locus_tag=LU631_RS03285;product=IS3 family transposase;protein_id=WP_020322977.1;transl_table=11 NZ_CP089940.1 RefSeq gene 644426 645697 . + . ID=gene-LU631_RS03290;Name=LU631_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03290;old_locus_tag=LU631_03290 NZ_CP089940.1 Protein Homology CDS 644426 645697 . + 0 ID=cds-WP_040465459.1;Parent=gene-LU631_RS03290;Dbxref=Genbank:WP_040465459.1;Name=WP_040465459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024178.1;locus_tag=LU631_RS03290;product=polysaccharide biosynthesis protein;protein_id=WP_040465459.1;transl_table=11 NZ_CP089940.1 RefSeq gene 645691 646644 . + . ID=gene-LU631_RS03295;Name=LU631_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03295;old_locus_tag=LU631_03295 NZ_CP089940.1 Protein Homology CDS 645691 646644 . + 0 ID=cds-WP_020322975.1;Parent=gene-LU631_RS03295;Dbxref=Genbank:WP_020322975.1;Name=WP_020322975.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025663.2;locus_tag=LU631_RS03295;product=ATP-grasp fold amidoligase family protein;protein_id=WP_020322975.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 646696 646951 . - . ID=gene-LU631_RS03300;Name=LU631_RS03300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03300;old_locus_tag=LU631_03300;pseudo=true NZ_CP089940.1 Protein Homology CDS 646696 646951 . - 0 ID=cds-LU631_RS03300;Parent=gene-LU631_RS03300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008109973.1;locus_tag=LU631_RS03300;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 647237 647581 . - . ID=gene-LU631_RS03305;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=LU631_RS03305;old_locus_tag=LU631_03305 NZ_CP089940.1 Protein Homology CDS 647237 647581 . - 0 ID=cds-WP_020322974.1;Parent=gene-LU631_RS03305;Dbxref=Genbank:WP_020322974.1;Name=WP_020322974.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200391.1;locus_tag=LU631_RS03305;product=superoxide response transcriptional regulator SoxS;protein_id=WP_020322974.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 647726 648172 . + . ID=gene-LU631_RS03310;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=pseudogene;locus_tag=LU631_RS03310;old_locus_tag=LU631_03310;pseudo=true NZ_CP089940.1 Protein Homology CDS 647726 648172 . + 0 ID=cds-LU631_RS03310;Parent=gene-LU631_RS03310;Note=internal stop;Ontology_term=GO:0006355,GO:0006979,GO:0003677,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008109977.1;locus_tag=LU631_RS03310;product=redox-sensitive transcriptional activator SoxR;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 648216 648878 . + . ID=gene-LU631_RS03315;Name=LU631_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03315;old_locus_tag=LU631_03315 NZ_CP089940.1 Protein Homology CDS 648216 648878 . + 0 ID=cds-WP_020322971.1;Parent=gene-LU631_RS03315;Dbxref=Genbank:WP_020322971.1;Name=WP_020322971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200393.1;locus_tag=LU631_RS03315;product=glutathione S-transferase;protein_id=WP_020322971.1;transl_table=11 NZ_CP089940.1 RefSeq gene 649102 650451 . + . ID=gene-LU631_RS03320;Name=LU631_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03320;old_locus_tag=LU631_03320 NZ_CP089940.1 Protein Homology CDS 649102 650451 . + 0 ID=cds-WP_020322969.1;Parent=gene-LU631_RS03320;Dbxref=Genbank:WP_020322969.1;Name=WP_020322969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=LU631_RS03320;product=NCS2 family permease;protein_id=WP_020322969.1;transl_table=11 NZ_CP089940.1 RefSeq gene 650623 652272 . + . ID=gene-LU631_RS03325;Name=LU631_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03325;old_locus_tag=LU631_03325 NZ_CP089940.1 Protein Homology CDS 650623 652272 . + 0 ID=cds-WP_020322968.1;Parent=gene-LU631_RS03325;Dbxref=Genbank:WP_020322968.1;Name=WP_020322968.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;gbkey=CDS;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005271285.1;locus_tag=LU631_RS03325;product=Na+/H+ antiporter;protein_id=WP_020322968.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 652336 653240 . - . ID=gene-LU631_RS03330;Name=LU631_RS03330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03330;old_locus_tag=LU631_03330;pseudo=true NZ_CP089940.1 Protein Homology CDS 652336 653240 . - 0 ID=cds-LU631_RS03330;Parent=gene-LU631_RS03330;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160403.1;locus_tag=LU631_RS03330;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 653340 653564 . + . ID=gene-LU631_RS03335;Name=LU631_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03335;old_locus_tag=LU631_03335 NZ_CP089940.1 Protein Homology CDS 653340 653564 . + 0 ID=cds-WP_051124366.1;Parent=gene-LU631_RS03335;Dbxref=Genbank:WP_051124366.1;Name=WP_051124366.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015729.2;locus_tag=LU631_RS03335;product=CidA/LrgA family protein;protein_id=WP_051124366.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 653641 653880 . + . ID=gene-LU631_RS03340;Name=LU631_RS03340;end_range=653880,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03340;old_locus_tag=LU631_03340;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 653641 653880 . + 0 ID=cds-LU631_RS03340;Parent=gene-LU631_RS03340;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=653880,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160396.1;locus_tag=LU631_RS03340;partial=true;product=LrgB family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 654182 654727 . + . ID=gene-LU631_RS03345;Name=LU631_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03345;old_locus_tag=LU631_03345 NZ_CP089940.1 Protein Homology CDS 654182 654727 . + 0 ID=cds-WP_040465519.1;Parent=gene-LU631_RS03345;Dbxref=Genbank:WP_040465519.1;Name=WP_040465519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160394.1;locus_tag=LU631_RS03345;product=YfaZ family outer membrane protein;protein_id=WP_040465519.1;transl_table=11 NZ_CP089940.1 RefSeq gene 654791 656746 . - . ID=gene-LU631_RS03350;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=LU631_RS03350;old_locus_tag=LU631_03350 NZ_CP089940.1 Protein Homology CDS 654791 656746 . - 0 ID=cds-WP_020322963.1;Parent=gene-LU631_RS03350;Dbxref=Genbank:WP_020322963.1;Name=WP_020322963.1;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539560.1;locus_tag=LU631_RS03350;product=acetate--CoA ligase;protein_id=WP_020322963.1;transl_table=11 NZ_CP089940.1 RefSeq gene 657243 658541 . + . ID=gene-LU631_RS03355;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=LU631_RS03355;old_locus_tag=LU631_03355 NZ_CP089940.1 Protein Homology CDS 657243 658541 . + 0 ID=cds-WP_020322961.1;Parent=gene-LU631_RS03355;Dbxref=Genbank:WP_020322961.1;Name=WP_020322961.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014595076.1;locus_tag=LU631_RS03355;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_020322961.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 658833 659226 . + . ID=gene-LU631_RS03360;Name=LU631_RS03360;end_range=659226,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03360;old_locus_tag=LU631_03360;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 658833 659226 . + 0 ID=cds-LU631_RS03360;Parent=gene-LU631_RS03360;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=659226,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000094721.1;locus_tag=LU631_RS03360;partial=true;product=PAS domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 659413 660272 . + . ID=gene-LU631_RS03365;Name=LU631_RS03365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03365;old_locus_tag=LU631_03365;partial=true;pseudo=true;start_range=.,659413 NZ_CP089940.1 Protein Homology CDS 659413 660272 . + 0 ID=cds-LU631_RS03365;Parent=gene-LU631_RS03365;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171055.1;locus_tag=LU631_RS03365;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;start_range=.,659413;transl_table=11 NZ_CP089940.1 RefSeq gene 660873 661061 . + . ID=gene-LU631_RS03370;Name=LU631_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03370;old_locus_tag=LU631_03370 NZ_CP089940.1 GeneMarkS-2+ CDS 660873 661061 . + 0 ID=cds-WP_051124365.1;Parent=gene-LU631_RS03370;Dbxref=Genbank:WP_051124365.1;Name=WP_051124365.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03370;product=hypothetical protein;protein_id=WP_051124365.1;transl_table=11 NZ_CP089940.1 RefSeq gene 661055 661948 . + . ID=gene-LU631_RS03375;Name=LU631_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03375;old_locus_tag=LU631_03375 NZ_CP089940.1 Protein Homology CDS 661055 661948 . + 0 ID=cds-WP_051124364.1;Parent=gene-LU631_RS03375;Dbxref=Genbank:WP_051124364.1;Name=WP_051124364.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: protein motif:HMM:NF014753.2;locus_tag=LU631_RS03375;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_051124364.1;transl_table=11 NZ_CP089940.1 RefSeq gene 661958 662128 . - . ID=gene-LU631_RS03380;Name=LU631_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03380;old_locus_tag=LU631_03380 NZ_CP089940.1 GeneMarkS-2+ CDS 661958 662128 . - 0 ID=cds-WP_232426839.1;Parent=gene-LU631_RS03380;Dbxref=Genbank:WP_232426839.1;Name=WP_232426839.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03380;product=hypothetical protein;protein_id=WP_232426839.1;transl_table=11 NZ_CP089940.1 RefSeq gene 662121 662273 . + . ID=gene-LU631_RS03385;Name=LU631_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03385;old_locus_tag=LU631_03385 NZ_CP089940.1 Protein Homology CDS 662121 662273 . + 0 ID=cds-WP_020322955.1;Parent=gene-LU631_RS03385;Dbxref=Genbank:WP_020322955.1;Name=WP_020322955.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: protein motif:HMM:NF014754.2;locus_tag=LU631_RS03385;product=DAK2 domain-containing protein;protein_id=WP_020322955.1;transl_table=11 NZ_CP089940.1 RefSeq gene 662332 663531 . - . ID=gene-LU631_RS03390;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=LU631_RS03390;old_locus_tag=LU631_03390 NZ_CP089940.1 Protein Homology CDS 662332 663531 . - 0 ID=cds-WP_020322954.1;Parent=gene-LU631_RS03390;Dbxref=Genbank:WP_020322954.1;Name=WP_020322954.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160384.1;locus_tag=LU631_RS03390;product=peptide antibiotic transporter SbmA;protein_id=WP_020322954.1;transl_table=11 NZ_CP089940.1 RefSeq gene 664209 664906 . + . ID=gene-LU631_RS03395;Name=LU631_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03395;old_locus_tag=LU631_03395 NZ_CP089940.1 Protein Homology CDS 664209 664458 . + 0 ID=cds-WP_233481984.1;Parent=gene-LU631_RS03395;Dbxref=Genbank:WP_233481984.1;Name=WP_233481984.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS03395;product=IS1 family transposase;protein_id=WP_233481984.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 664458 664906 . + 2 ID=cds-WP_233481984.1;Parent=gene-LU631_RS03395;Dbxref=Genbank:WP_233481984.1;Name=WP_233481984.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS03395;product=IS1 family transposase;protein_id=WP_233481984.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 665192 667315 . + . ID=gene-LU631_RS03400;Name=LU631_RS03400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03400;old_locus_tag=LU631_03400;partial=true;pseudo=true;start_range=.,665192 NZ_CP089940.1 Protein Homology CDS 665192 667315 . + 0 ID=cds-LU631_RS03400;Parent=gene-LU631_RS03400;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004173425.1;locus_tag=LU631_RS03400;partial=true;product=EAL domain-containing protein;pseudo=true;start_range=.,665192;transl_table=11 NZ_CP089940.1 RefSeq gene 667680 668459 . + . ID=gene-LU631_RS03405;Name=LU631_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03405;old_locus_tag=LU631_03405 NZ_CP089940.1 Protein Homology CDS 667680 668459 . + 0 ID=cds-WP_020322953.1;Parent=gene-LU631_RS03405;Dbxref=Genbank:WP_020322953.1;Name=WP_020322953.1;Ontology_term=GO:0003725;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442751.1;locus_tag=LU631_RS03405;product=Sua5/YciO/YrdC/YwlC family protein;protein_id=WP_020322953.1;transl_table=11 NZ_CP089940.1 RefSeq gene 668492 669388 . - . ID=gene-LU631_RS03410;Name=LU631_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03410;old_locus_tag=LU631_03410 NZ_CP089940.1 Protein Homology CDS 668492 669388 . - 0 ID=cds-WP_020322952.1;Parent=gene-LU631_RS03410;Dbxref=Genbank:WP_020322952.1;Name=WP_020322952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200419.1;locus_tag=LU631_RS03410;product=LysR family transcriptional regulator;protein_id=WP_020322952.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 669509 670608 . - . ID=gene-LU631_RS03415;Name=LU631_RS03415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03415;old_locus_tag=LU631_03415;pseudo=true NZ_CP089940.1 Protein Homology CDS 669509 670608 . - 0 ID=cds-LU631_RS03415;Parent=gene-LU631_RS03415;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200420.1;locus_tag=LU631_RS03415;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 671623 671922 . + . ID=gene-LU631_RS03420;Name=LU631_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03420;old_locus_tag=LU631_03420 NZ_CP089940.1 Protein Homology CDS 671623 671922 . + 0 ID=cds-WP_071598895.1;Parent=gene-LU631_RS03420;Dbxref=Genbank:WP_071598895.1;Name=WP_071598895.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: protein motif:HMM:NF013377.2;locus_tag=LU631_RS03420;product=trehalase family glycosidase;protein_id=WP_071598895.1;transl_table=11 NZ_CP089940.1 RefSeq gene 672048 672491 . + . ID=gene-LU631_RS03425;Name=LU631_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03425;old_locus_tag=LU631_03425 NZ_CP089940.1 Protein Homology CDS 672048 672491 . + 0 ID=cds-WP_051124360.1;Parent=gene-LU631_RS03425;Dbxref=Genbank:WP_051124360.1;Name=WP_051124360.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: protein motif:HMM:NF013377.2;locus_tag=LU631_RS03425;product=trehalase family glycosidase;protein_id=WP_051124360.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 672786 673599 . + . ID=gene-LU631_RS03430;Name=LU631_RS03430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03430;old_locus_tag=LU631_03430;pseudo=true NZ_CP089940.1 Protein Homology CDS 672786 673599 . + 0 ID=cds-LU631_RS03430;Parent=gene-LU631_RS03430;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191525.1;locus_tag=LU631_RS03430;product=DUF4225 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 673774 674982 . - . ID=gene-LU631_RS03435;Name=LU631_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03435;old_locus_tag=LU631_03435 NZ_CP089940.1 Protein Homology CDS 673774 674982 . - 0 ID=cds-WP_046372161.1;Parent=gene-LU631_RS03435;Dbxref=Genbank:WP_046372161.1;Name=WP_046372161.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS03435;product=IS256 family transposase;protein_id=WP_046372161.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 675472 676168 . + . ID=gene-LU631_RS03440;Name=LU631_RS03440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03440;old_locus_tag=LU631_03440;pseudo=true NZ_CP089940.1 Protein Homology CDS 675472 676168 . + 0 ID=cds-LU631_RS03440;Parent=gene-LU631_RS03440;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=LU631_RS03440;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 676676 678145 . + . ID=gene-LU631_RS03445;Name=LU631_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03445;old_locus_tag=LU631_03445 NZ_CP089940.1 GeneMarkS-2+ CDS 676676 678145 . + 0 ID=cds-WP_051124358.1;Parent=gene-LU631_RS03445;Dbxref=Genbank:WP_051124358.1;Name=WP_051124358.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03445;product=hypothetical protein;protein_id=WP_051124358.1;transl_table=11 NZ_CP089940.1 RefSeq gene 678622 679191 . + . ID=gene-LU631_RS03450;Name=LU631_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03450;old_locus_tag=LU631_03450 NZ_CP089940.1 GeneMarkS-2+ CDS 678622 679191 . + 0 ID=cds-WP_152664243.1;Parent=gene-LU631_RS03450;Dbxref=Genbank:WP_152664243.1;Name=WP_152664243.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03450;product=hypothetical protein;protein_id=WP_152664243.1;transl_table=11 NZ_CP089940.1 RefSeq gene 679142 680362 . - . ID=gene-LU631_RS03455;Name=LU631_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03455;old_locus_tag=LU631_03455 NZ_CP089940.1 Protein Homology CDS 679142 680362 . - 0 ID=cds-WP_046371806.1;Parent=gene-LU631_RS03455;Dbxref=Genbank:WP_046371806.1;Name=WP_046371806.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025244073.1;locus_tag=LU631_RS03455;product=ISL3 family transposase;protein_id=WP_046371806.1;transl_table=11 NZ_CP089940.1 RefSeq gene 680398 680913 . + . ID=gene-LU631_RS03460;Name=LU631_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03460;old_locus_tag=LU631_03460 NZ_CP089940.1 GeneMarkS-2+ CDS 680398 680913 . + 0 ID=cds-WP_046372163.1;Parent=gene-LU631_RS03460;Dbxref=Genbank:WP_046372163.1;Name=WP_046372163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03460;product=hypothetical protein;protein_id=WP_046372163.1;transl_table=11 NZ_CP089940.1 RefSeq gene 680976 682646 . + . ID=gene-LU631_RS03465;Name=LU631_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03465;old_locus_tag=LU631_03465 NZ_CP089940.1 GeneMarkS-2+ CDS 680976 682646 . + 0 ID=cds-WP_046372164.1;Parent=gene-LU631_RS03465;Dbxref=Genbank:WP_046372164.1;Name=WP_046372164.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03465;product=hypothetical protein;protein_id=WP_046372164.1;transl_table=11 NZ_CP089940.1 RefSeq gene 682559 683758 . - . ID=gene-LU631_RS03470;Name=LU631_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03470;old_locus_tag=LU631_03470 NZ_CP089940.1 Protein Homology CDS 682559 683758 . - 0 ID=cds-WP_046372110.1-3;Parent=gene-LU631_RS03470;Dbxref=Genbank:WP_046372110.1;Name=WP_046372110.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU631_RS03470;product=IS91 family transposase;protein_id=WP_046372110.1;transl_table=11 NZ_CP089940.1 RefSeq gene 683767 683955 . - . ID=gene-LU631_RS03475;Name=LU631_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03475;old_locus_tag=LU631_03475 NZ_CP089940.1 Protein Homology CDS 683767 683955 . - 0 ID=cds-WP_020322936.1-4;Parent=gene-LU631_RS03475;Dbxref=Genbank:WP_020322936.1;Name=WP_020322936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192885.1;locus_tag=LU631_RS03475;product=hypothetical protein;protein_id=WP_020322936.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 684048 684493 . - . ID=gene-LU631_RS03480;Name=LU631_RS03480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03480;old_locus_tag=LU631_03480;partial=true;pseudo=true;start_range=.,684048 NZ_CP089940.1 Protein Homology CDS 684048 684493 . - 0 ID=cds-LU631_RS03480;Parent=gene-LU631_RS03480;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098917.1;locus_tag=LU631_RS03480;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,684048;transl_table=11 NZ_CP089940.1 RefSeq gene 684663 685364 . + . ID=gene-LU631_RS03485;Name=LU631_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03485;old_locus_tag=LU631_03485 NZ_CP089940.1 Protein Homology CDS 684663 685364 . + 0 ID=cds-WP_020322933.1;Parent=gene-LU631_RS03485;Dbxref=Genbank:WP_020322933.1;Name=WP_020322933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539164.1;locus_tag=LU631_RS03485;product=hypothetical protein;protein_id=WP_020322933.1;transl_table=11 NZ_CP089940.1 RefSeq gene 685361 685792 . + . ID=gene-LU631_RS03490;Name=LU631_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03490;old_locus_tag=LU631_03490 NZ_CP089940.1 Protein Homology CDS 685361 685792 . + 0 ID=cds-WP_020322931.1;Parent=gene-LU631_RS03490;Dbxref=Genbank:WP_020322931.1;Name=WP_020322931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015672941.1;locus_tag=LU631_RS03490;product=hypothetical protein;protein_id=WP_020322931.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 685918 687122 . + . ID=gene-LU631_RS03495;Name=LU631_RS03495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03495;old_locus_tag=LU631_03495;pseudo=true NZ_CP089940.1 Protein Homology CDS 685918 687122 . + 0 ID=cds-LU631_RS03495;Parent=gene-LU631_RS03495;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU631_RS03495;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 687145 687435 . + . ID=gene-LU631_RS03500;Name=LU631_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03500;old_locus_tag=LU631_03500 NZ_CP089940.1 Protein Homology CDS 687145 687435 . + 0 ID=cds-WP_232426838.1;Parent=gene-LU631_RS03500;Dbxref=Genbank:WP_232426838.1;Name=WP_232426838.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014417.2;locus_tag=LU631_RS03500;product=hypothetical protein;protein_id=WP_232426838.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 687718 688275 . - . ID=gene-LU631_RS03505;Name=LU631_RS03505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03505;old_locus_tag=LU631_03505;partial=true;pseudo=true;start_range=.,687718 NZ_CP089940.1 Protein Homology CDS 687718 688275 . - 0 ID=cds-LU631_RS03505;Parent=gene-LU631_RS03505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001744774.1;locus_tag=LU631_RS03505;partial=true;product=transposase;pseudo=true;start_range=.,687718;transl_table=11 NZ_CP089940.1 RefSeq gene 688658 688885 . - . ID=gene-LU631_RS03510;Name=LU631_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03510;old_locus_tag=LU631_03510 NZ_CP089940.1 Protein Homology CDS 688658 688885 . - 0 ID=cds-WP_071598894.1;Parent=gene-LU631_RS03510;Dbxref=Genbank:WP_071598894.1;Name=WP_071598894.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF013739.2;locus_tag=LU631_RS03510;product=FAD-dependent oxidoreductase;protein_id=WP_071598894.1;transl_table=11 NZ_CP089940.1 RefSeq gene 689648 690907 . + . ID=gene-LU631_RS03515;Name=LU631_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03515;old_locus_tag=LU631_03515 NZ_CP089940.1 Protein Homology CDS 689648 690907 . + 0 ID=cds-WP_020322926.1;Parent=gene-LU631_RS03515;Dbxref=Genbank:WP_020322926.1;Name=WP_020322926.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012296.2;locus_tag=LU631_RS03515;product=cytochrome P450;protein_id=WP_020322926.1;transl_table=11 NZ_CP089940.1 RefSeq gene 690900 692102 . + . ID=gene-LU631_RS03520;Name=LU631_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03520;old_locus_tag=LU631_03520 NZ_CP089940.1 Protein Homology CDS 690900 692102 . + 0 ID=cds-WP_020322925.1;Parent=gene-LU631_RS03520;Dbxref=Genbank:WP_020322925.1;Name=WP_020322925.1;Ontology_term=GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: protein motif:HMM:NF012296.2;locus_tag=LU631_RS03520;product=cytochrome P450;protein_id=WP_020322925.1;transl_table=11 NZ_CP089940.1 RefSeq gene 692186 693487 . + . ID=gene-LU631_RS03525;Name=LU631_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03525;old_locus_tag=LU631_03525 NZ_CP089940.1 Protein Homology CDS 692186 693487 . + 0 ID=cds-WP_020322924.1;Parent=gene-LU631_RS03525;Dbxref=Genbank:WP_020322924.1;Name=WP_020322924.1;Ontology_term=GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: protein motif:HMM:NF012296.2;locus_tag=LU631_RS03525;product=cytochrome P450;protein_id=WP_020322924.1;transl_table=11 NZ_CP089940.1 RefSeq gene 693489 693758 . + . ID=gene-LU631_RS03530;Name=LU631_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03530;old_locus_tag=LU631_03530 NZ_CP089940.1 Protein Homology CDS 693489 693758 . + 0 ID=cds-WP_020322923.1;Parent=gene-LU631_RS03530;Dbxref=Genbank:WP_020322923.1;Name=WP_020322923.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018595.2;locus_tag=LU631_RS03530;product=ferredoxin;protein_id=WP_020322923.1;transl_table=11 NZ_CP089940.1 RefSeq gene 693755 694591 . + . ID=gene-LU631_RS03535;Name=LU631_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03535;old_locus_tag=LU631_03535 NZ_CP089940.1 Protein Homology CDS 693755 694591 . + 0 ID=cds-WP_020322922.1;Parent=gene-LU631_RS03535;Dbxref=Genbank:WP_020322922.1;Name=WP_020322922.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF005559.1;locus_tag=LU631_RS03535;product=SDR family oxidoreductase;protein_id=WP_020322922.1;transl_table=11 NZ_CP089940.1 RefSeq gene 694656 695969 . + . ID=gene-LU631_RS03540;Name=LU631_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03540;old_locus_tag=LU631_03540 NZ_CP089940.1 Protein Homology CDS 694656 695969 . + 0 ID=cds-WP_198292516.1;Parent=gene-LU631_RS03540;Dbxref=Genbank:WP_198292516.1;Name=WP_198292516.1;Ontology_term=GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: protein motif:HMM:NF012296.2;locus_tag=LU631_RS03540;product=cytochrome P450;protein_id=WP_198292516.1;transl_table=11 NZ_CP089940.1 RefSeq gene 696117 697100 . + . ID=gene-LU631_RS03545;Name=LU631_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03545;old_locus_tag=LU631_03545 NZ_CP089940.1 Protein Homology CDS 696117 697100 . + 0 ID=cds-WP_020322920.1;Parent=gene-LU631_RS03545;Dbxref=Genbank:WP_020322920.1;Name=WP_020322920.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: protein motif:HMM:NF012568.2;locus_tag=LU631_RS03545;product=polyprenyl synthetase family protein;protein_id=WP_020322920.1;transl_table=11 NZ_CP089940.1 RefSeq gene 697152 698723 . + . ID=gene-LU631_RS03550;Name=LU631_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03550;old_locus_tag=LU631_03550 NZ_CP089940.1 GeneMarkS-2+ CDS 697152 698723 . + 0 ID=cds-WP_020322919.1;Parent=gene-LU631_RS03550;Dbxref=Genbank:WP_020322919.1;Name=WP_020322919.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03550;product=ent-copalyl diphosphate synthase;protein_id=WP_020322919.1;transl_table=11 NZ_CP089940.1 RefSeq gene 698720 699670 . + . ID=gene-LU631_RS03555;Name=LU631_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03555;old_locus_tag=LU631_03555 NZ_CP089940.1 Protein Homology CDS 698720 699670 . + 0 ID=cds-WP_020322918.1;Parent=gene-LU631_RS03555;Dbxref=Genbank:WP_020322918.1;Name=WP_020322918.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040195.1;locus_tag=LU631_RS03555;product=hypothetical protein;protein_id=WP_020322918.1;transl_table=11 NZ_CP089940.1 RefSeq gene 699657 700706 . + . ID=gene-LU631_RS03560;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=LU631_RS03560;old_locus_tag=LU631_03560 NZ_CP089940.1 Protein Homology CDS 699657 700706 . + 0 ID=cds-WP_020322916.1;Parent=gene-LU631_RS03560;Dbxref=Genbank:WP_020322916.1;Name=WP_020322916.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007778169.1;locus_tag=LU631_RS03560;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=WP_020322916.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 700808 700933 . + . ID=gene-LU631_RS03565;Name=LU631_RS03565;end_range=700933,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03565;old_locus_tag=LU631_03565;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 700808 700933 . + 0 ID=cds-LU631_RS03565;Parent=gene-LU631_RS03565;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=700933,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU631_RS03565;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 700912 701037 . + . ID=gene-LU631_RS03570;Name=LU631_RS03570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03570;old_locus_tag=LU631_03570;partial=true;pseudo=true;start_range=.,700912 NZ_CP089940.1 Protein Homology CDS 700912 701037 . + 0 ID=cds-LU631_RS03570;Parent=gene-LU631_RS03570;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322936.1;locus_tag=LU631_RS03570;partial=true;product=hypothetical protein;pseudo=true;start_range=.,700912;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 701046 701701 . + . ID=gene-LU631_RS03575;Name=LU631_RS03575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03575;old_locus_tag=LU631_03575;pseudo=true NZ_CP089940.1 Protein Homology CDS 701046 701701 . + 0 ID=cds-LU631_RS03575;Parent=gene-LU631_RS03575;Note=frameshifted%3B internal stop;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU631_RS03575;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 701983 702889 . + . ID=gene-LU631_RS03580;Name=LU631_RS03580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03580;old_locus_tag=LU631_03580;pseudo=true NZ_CP089940.1 Protein Homology CDS 701983 702889 . + 0 ID=cds-LU631_RS03580;Parent=gene-LU631_RS03580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=LU631_RS03580;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 703150 704370 . + . ID=gene-LU631_RS03585;Name=LU631_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03585;old_locus_tag=LU631_03585 NZ_CP089940.1 GeneMarkS-2+ CDS 703150 704370 . + 0 ID=cds-WP_051124356.1;Parent=gene-LU631_RS03585;Dbxref=Genbank:WP_051124356.1;Name=WP_051124356.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03585;product=hypothetical protein;protein_id=WP_051124356.1;transl_table=11 NZ_CP089940.1 RefSeq gene 704389 706257 . + . ID=gene-LU631_RS03590;Name=LU631_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03590;old_locus_tag=LU631_03590 NZ_CP089940.1 GeneMarkS-2+ CDS 704389 706257 . + 0 ID=cds-WP_051124355.1;Parent=gene-LU631_RS03590;Dbxref=Genbank:WP_051124355.1;Name=WP_051124355.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03590;product=hypothetical protein;protein_id=WP_051124355.1;transl_table=11 NZ_CP089940.1 RefSeq gene 706265 706768 . - . ID=gene-LU631_RS03595;Name=LU631_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03595;old_locus_tag=LU631_03595 NZ_CP089940.1 Protein Homology CDS 706265 706768 . - 0 ID=cds-WP_046372165.1;Parent=gene-LU631_RS03595;Dbxref=Genbank:WP_046372165.1;Name=WP_046372165.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU631_RS03595;product=IS1 family transposase;protein_id=WP_046372165.1;transl_table=11 NZ_CP089940.1 RefSeq gene 706687 706962 . - . ID=gene-LU631_RS03600;Name=LU631_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03600;old_locus_tag=LU631_03600 NZ_CP089940.1 Protein Homology CDS 706687 706962 . - 0 ID=cds-WP_072052854.1;Parent=gene-LU631_RS03600;Dbxref=Genbank:WP_072052854.1;Name=WP_072052854.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU631_RS03600;product=IS1-like element transposase;protein_id=WP_072052854.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 707476 708475 . - . ID=gene-LU631_RS03605;Name=LU631_RS03605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03605;old_locus_tag=LU631_03605;partial=true;pseudo=true;start_range=.,707476 NZ_CP089940.1 Protein Homology CDS 707476 708475 . - 0 ID=cds-LU631_RS03605;Parent=gene-LU631_RS03605;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU631_RS03605;partial=true;product=transposase;pseudo=true;start_range=.,707476;transl_table=11 NZ_CP089940.1 RefSeq gene 708824 709030 . + . ID=gene-LU631_RS03620;Name=LU631_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03620;old_locus_tag=LU631_03620 NZ_CP089940.1 Protein Homology CDS 708824 709030 . + 0 ID=cds-WP_020322907.1;Parent=gene-LU631_RS03620;Dbxref=Genbank:WP_020322907.1;Name=WP_020322907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006707089.1;locus_tag=LU631_RS03620;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_020322907.1;transl_table=11 NZ_CP089940.1 RefSeq gene 709027 709404 . + . ID=gene-LU631_RS03625;Name=LU631_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03625;old_locus_tag=LU631_03625 NZ_CP089940.1 Protein Homology CDS 709027 709404 . + 0 ID=cds-WP_020322906.1;Parent=gene-LU631_RS03625;Dbxref=Genbank:WP_020322906.1;Name=WP_020322906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122240.1;locus_tag=LU631_RS03625;product=hypothetical protein;protein_id=WP_020322906.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 709875 711074 . - . ID=gene-LU631_RS03630;Name=LU631_RS03630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03630;old_locus_tag=LU631_03630;pseudo=true NZ_CP089940.1 Protein Homology CDS 709875 711074 . - 0 ID=cds-LU631_RS03630;Parent=gene-LU631_RS03630;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU631_RS03630;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 711098 711271 . - . ID=gene-LU631_RS03635;Name=LU631_RS03635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03635;old_locus_tag=LU631_03635;partial=true;pseudo=true;start_range=.,711098 NZ_CP089940.1 Protein Homology CDS 711098 711271 . - 0 ID=cds-LU631_RS03635;Parent=gene-LU631_RS03635;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707455.1;locus_tag=LU631_RS03635;partial=true;product=hypothetical protein;pseudo=true;start_range=.,711098;transl_table=11 NZ_CP089940.1 RefSeq gene 711804 713285 . + . ID=gene-LU631_RS03640;Name=LU631_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03640;old_locus_tag=LU631_03640 NZ_CP089940.1 Protein Homology CDS 711804 713285 . + 0 ID=cds-WP_200896939.1;Parent=gene-LU631_RS03640;Dbxref=Genbank:WP_200896939.1;Name=WP_200896939.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012512.2;locus_tag=LU631_RS03640;product=threonine/serine dehydratase;protein_id=WP_200896939.1;transl_table=11 NZ_CP089940.1 RefSeq gene 713311 714525 . - . ID=gene-LU631_RS03645;Name=LU631_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03645;old_locus_tag=LU631_03645 NZ_CP089940.1 Protein Homology CDS 713311 714525 . - 0 ID=cds-WP_046371879.1-6;Parent=gene-LU631_RS03645;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS03645;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 714534 714869 . - . ID=gene-LU631_RS03650;Name=LU631_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03650;old_locus_tag=LU631_03650 NZ_CP089940.1 GeneMarkS-2+ CDS 714534 714869 . - 0 ID=cds-WP_052734695.1-2;Parent=gene-LU631_RS03650;Dbxref=Genbank:WP_052734695.1;Name=WP_052734695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03650;product=hypothetical protein;protein_id=WP_052734695.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 716238 716333 . + . ID=gene-LU631_RS03655;Name=LU631_RS03655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03655;old_locus_tag=LU631_03655;partial=true;pseudo=true;start_range=.,716238 NZ_CP089940.1 Protein Homology CDS 716238 716333 . + 0 ID=cds-LU631_RS03655;Parent=gene-LU631_RS03655;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000956455.1;locus_tag=LU631_RS03655;partial=true;product=Hok/Gef family protein;pseudo=true;start_range=.,716238;transl_table=11 NZ_CP089940.1 RefSeq gene 716598 717989 . + . ID=gene-LU631_RS03660;Name=LU631_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03660;old_locus_tag=LU631_03660 NZ_CP089940.1 Protein Homology CDS 716598 717989 . + 0 ID=cds-WP_161796995.1;Parent=gene-LU631_RS03660;Dbxref=Genbank:WP_161796995.1;Name=WP_161796995.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03760.1;locus_tag=LU631_RS03660;product=TraI domain-containing protein;protein_id=WP_161796995.1;transl_table=11 NZ_CP089940.1 RefSeq gene 718067 718309 . + . ID=gene-LU631_RS03665;Name=LU631_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03665;old_locus_tag=LU631_03665 NZ_CP089940.1 Protein Homology CDS 718067 718309 . + 0 ID=cds-WP_020322900.1;Parent=gene-LU631_RS03665;Dbxref=Genbank:WP_020322900.1;Name=WP_020322900.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022183.2;locus_tag=LU631_RS03665;product=hypothetical protein;protein_id=WP_020322900.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 718530 719072 . + . ID=gene-LU631_RS03670;Name=repA;end_range=719072,.;gbkey=Gene;gene=repA;gene_biotype=pseudogene;locus_tag=LU631_RS03670;old_locus_tag=LU631_03670;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 718530 719072 . + 0 ID=cds-LU631_RS03670;Parent=gene-LU631_RS03670;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=719072,.;gbkey=CDS;gene=repA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490498.3;locus_tag=LU631_RS03670;partial=true;product=plasmid replication initiator RepA;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 719325 719546 . + . ID=gene-LU631_RS03675;Name=LU631_RS03675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03675;old_locus_tag=LU631_03675;partial=true;pseudo=true;start_range=.,719325 NZ_CP089940.1 Protein Homology CDS 719325 719546 . + 0 ID=cds-LU631_RS03675;Parent=gene-LU631_RS03675;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012976033.1;locus_tag=LU631_RS03675;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,719325;transl_table=11 NZ_CP089940.1 RefSeq gene 719579 719830 . + . ID=gene-LU631_RS03680;Name=LU631_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03680;old_locus_tag=LU631_03680 NZ_CP089940.1 Protein Homology CDS 719579 719830 . + 0 ID=cds-WP_020322896.1;Parent=gene-LU631_RS03680;Dbxref=Genbank:WP_020322896.1;Name=WP_020322896.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: protein motif:HMM:NF013377.2;locus_tag=LU631_RS03680;product=trehalase family glycosidase;protein_id=WP_020322896.1;transl_table=11 NZ_CP089940.1 RefSeq gene 719897 720316 . - . ID=gene-LU631_RS03685;Name=LU631_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03685;old_locus_tag=LU631_03685 NZ_CP089940.1 Protein Homology CDS 719897 720316 . - 0 ID=cds-WP_020322895.1;Parent=gene-LU631_RS03685;Dbxref=Genbank:WP_020322895.1;Name=WP_020322895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594531.1;locus_tag=LU631_RS03685;product=helix-turn-helix domain-containing protein;protein_id=WP_020322895.1;transl_table=11 NZ_CP089940.1 RefSeq gene 720440 721303 . + . ID=gene-LU631_RS03690;Name=LU631_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03690;old_locus_tag=LU631_03690 NZ_CP089940.1 Protein Homology CDS 720440 721303 . + 0 ID=cds-WP_020322893.1;Parent=gene-LU631_RS03690;Dbxref=Genbank:WP_020322893.1;Name=WP_020322893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200436.1;locus_tag=LU631_RS03690;product=SDR family oxidoreductase;protein_id=WP_020322893.1;transl_table=11 NZ_CP089940.1 RefSeq gene 721872 724022 . - . ID=gene-LU631_RS03695;Name=LU631_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03695;old_locus_tag=LU631_03695 NZ_CP089940.1 Protein Homology CDS 721872 724022 . - 0 ID=cds-WP_046372171.1;Parent=gene-LU631_RS03695;Dbxref=Genbank:WP_046372171.1;Name=WP_046372171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356588.1;locus_tag=LU631_RS03695;product=peptidase domain-containing ABC transporter;protein_id=WP_046372171.1;transl_table=11 NZ_CP089940.1 RefSeq gene 724052 725311 . - . ID=gene-LU631_RS03700;Name=LU631_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03700;old_locus_tag=LU631_03700 NZ_CP089940.1 Protein Homology CDS 724052 725311 . - 0 ID=cds-WP_040465454.1;Parent=gene-LU631_RS03700;Dbxref=Genbank:WP_040465454.1;Name=WP_040465454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010256789.1;locus_tag=LU631_RS03700;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_040465454.1;transl_table=11 NZ_CP089940.1 RefSeq gene 725335 726651 . - . ID=gene-LU631_RS03705;Name=LU631_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03705;old_locus_tag=LU631_03705 NZ_CP089940.1 Protein Homology CDS 725335 726651 . - 0 ID=cds-WP_020322889.1;Parent=gene-LU631_RS03705;Dbxref=Genbank:WP_020322889.1;Name=WP_020322889.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01844.1;locus_tag=LU631_RS03705;product=TolC family outer membrane protein;protein_id=WP_020322889.1;transl_table=11 NZ_CP089940.1 RefSeq gene 726656 727111 . - . ID=gene-LU631_RS03710;Name=LU631_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03710;old_locus_tag=LU631_03710 NZ_CP089940.1 GeneMarkS-2+ CDS 726656 727111 . - 0 ID=cds-WP_020322888.1;Parent=gene-LU631_RS03710;Dbxref=Genbank:WP_020322888.1;Name=WP_020322888.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03710;product=hypothetical protein;protein_id=WP_020322888.1;transl_table=11 NZ_CP089940.1 RefSeq gene 728269 728868 . + . ID=gene-LU631_RS03715;Name=LU631_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03715;old_locus_tag=LU631_03715 NZ_CP089940.1 Protein Homology CDS 728269 728868 . + 0 ID=cds-WP_020322887.1;Parent=gene-LU631_RS03715;Dbxref=Genbank:WP_020322887.1;Name=WP_020322887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356578.1;locus_tag=LU631_RS03715;product=helix-turn-helix domain-containing protein;protein_id=WP_020322887.1;transl_table=11 NZ_CP089940.1 RefSeq gene 729240 731003 . - . ID=gene-LU631_RS03720;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=LU631_RS03720;old_locus_tag=LU631_03720 NZ_CP089940.1 Protein Homology CDS 729240 731003 . - 0 ID=cds-WP_020322886.1;Parent=gene-LU631_RS03720;Dbxref=Genbank:WP_020322886.1;Name=WP_020322886.1;Ontology_term=GO:0006750;gbkey=CDS;gene=ggt;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012772805.1;locus_tag=LU631_RS03720;product=gamma-glutamyltransferase;protein_id=WP_020322886.1;transl_table=11 NZ_CP089940.1 RefSeq gene 731073 731852 . - . ID=gene-LU631_RS03725;Name=LU631_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03725;old_locus_tag=LU631_03725 NZ_CP089940.1 Protein Homology CDS 731073 731852 . - 0 ID=cds-WP_020322885.1;Parent=gene-LU631_RS03725;Dbxref=Genbank:WP_020322885.1;Name=WP_020322885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155296.1;locus_tag=LU631_RS03725;product=phytochelatin synthase family protein;protein_id=WP_020322885.1;transl_table=11 NZ_CP089940.1 RefSeq gene 731927 732478 . - . ID=gene-LU631_RS03730;Name=LU631_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03730;old_locus_tag=LU631_03730 NZ_CP089940.1 Protein Homology CDS 731927 732478 . - 0 ID=cds-WP_020322884.1;Parent=gene-LU631_RS03730;Dbxref=Genbank:WP_020322884.1;Name=WP_020322884.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543222.1;locus_tag=LU631_RS03730;product=disulfide bond formation protein B;protein_id=WP_020322884.1;transl_table=11 NZ_CP089940.1 RefSeq gene 732487 732639 . - . ID=gene-LU631_RS03735;Name=LU631_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03735;old_locus_tag=LU631_03735 NZ_CP089940.1 Protein Homology CDS 732487 732639 . - 0 ID=cds-WP_232426850.1;Parent=gene-LU631_RS03735;Dbxref=Genbank:WP_232426850.1;Name=WP_232426850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039621.1;locus_tag=LU631_RS03735;product=DUF5993 family protein;protein_id=WP_232426850.1;transl_table=11 NZ_CP089940.1 RefSeq gene 733401 733901 . + . ID=gene-LU631_RS03740;Name=LU631_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03740;old_locus_tag=LU631_03740 NZ_CP089940.1 GeneMarkS-2+ CDS 733401 733901 . + 0 ID=cds-WP_233481985.1;Parent=gene-LU631_RS03740;Dbxref=Genbank:WP_233481985.1;Name=WP_233481985.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03740;product=hypothetical protein;protein_id=WP_233481985.1;transl_table=11 NZ_CP089940.1 RefSeq gene 733895 734488 . + . ID=gene-LU631_RS03745;Name=LU631_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03745;old_locus_tag=LU631_03745 NZ_CP089940.1 GeneMarkS-2+ CDS 733895 734488 . + 0 ID=cds-WP_232426835.1;Parent=gene-LU631_RS03745;Dbxref=Genbank:WP_232426835.1;Name=WP_232426835.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03745;product=hypothetical protein;protein_id=WP_232426835.1;transl_table=11 NZ_CP089940.1 RefSeq gene 734622 735866 . + . ID=gene-LU631_RS03750;Name=LU631_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03750;old_locus_tag=LU631_03750 NZ_CP089940.1 Protein Homology CDS 734622 735866 . + 0 ID=cds-WP_052734728.1;Parent=gene-LU631_RS03750;Dbxref=Genbank:WP_052734728.1;Name=WP_052734728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168413.1;locus_tag=LU631_RS03750;product=serine kinase;protein_id=WP_052734728.1;transl_table=11 NZ_CP089940.1 RefSeq gene 735892 737106 . - . ID=gene-LU631_RS03755;Name=LU631_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03755;old_locus_tag=LU631_03755 NZ_CP089940.1 Protein Homology CDS 735892 737106 . - 0 ID=cds-WP_046371879.1-7;Parent=gene-LU631_RS03755;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS03755;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 737115 737450 . - . ID=gene-LU631_RS03760;Name=LU631_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03760;old_locus_tag=LU631_03760 NZ_CP089940.1 GeneMarkS-2+ CDS 737115 737450 . - 0 ID=cds-WP_052734695.1-3;Parent=gene-LU631_RS03760;Dbxref=Genbank:WP_052734695.1;Name=WP_052734695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03760;product=hypothetical protein;protein_id=WP_052734695.1;transl_table=11 NZ_CP089940.1 RefSeq gene 737997 738701 . + . ID=gene-LU631_RS03765;Name=LU631_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03765;old_locus_tag=LU631_03765 NZ_CP089940.1 Protein Homology CDS 737997 738701 . + 0 ID=cds-WP_233481986.1;Parent=gene-LU631_RS03765;Dbxref=Genbank:WP_233481986.1;Name=WP_233481986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442930.1;locus_tag=LU631_RS03765;product=hypothetical protein;protein_id=WP_233481986.1;transl_table=11 NZ_CP089940.1 RefSeq gene 738698 738880 . + . ID=gene-LU631_RS03770;Name=LU631_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03770;old_locus_tag=LU631_03770 NZ_CP089940.1 Protein Homology CDS 738698 738880 . + 0 ID=cds-WP_020322880.1;Parent=gene-LU631_RS03770;Dbxref=Genbank:WP_020322880.1;Name=WP_020322880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367319.1;locus_tag=LU631_RS03770;product=hypothetical protein;protein_id=WP_020322880.1;transl_table=11 NZ_CP089940.1 RefSeq gene 739287 739502 . - . ID=gene-LU631_RS03775;Name=LU631_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03775;old_locus_tag=LU631_03775 NZ_CP089940.1 GeneMarkS-2+ CDS 739287 739502 . - 0 ID=cds-WP_072052855.1;Parent=gene-LU631_RS03775;Dbxref=Genbank:WP_072052855.1;Name=WP_072052855.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03775;product=hypothetical protein;protein_id=WP_072052855.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 739515 740511 . - . ID=gene-LU631_RS03780;Name=LU631_RS03780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03780;old_locus_tag=LU631_03780;pseudo=true NZ_CP089940.1 Protein Homology CDS 739515 740511 . - 0 ID=cds-LU631_RS03780;Parent=gene-LU631_RS03780;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS03780;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 740986 741111 . + . ID=gene-LU631_RS25990;Name=LU631_RS25990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25990 NZ_CP089940.1 GeneMarkS-2+ CDS 740986 741111 . + 0 ID=cds-WP_256371735.1;Parent=gene-LU631_RS25990;Dbxref=Genbank:WP_256371735.1;Name=WP_256371735.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS25990;product=hypothetical protein;protein_id=WP_256371735.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 741675 741929 . + . ID=gene-LU631_RS03785;Name=LU631_RS03785;end_range=741929,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03785;old_locus_tag=LU631_03785;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 741675 741929 . + 0 ID=cds-LU631_RS03785;Parent=gene-LU631_RS03785;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=741929,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608353.1;locus_tag=LU631_RS03785;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 742334 742618 . + . ID=gene-LU631_RS03790;Name=LU631_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03790;old_locus_tag=LU631_03790 NZ_CP089940.1 GeneMarkS-2+ CDS 742334 742618 . + 0 ID=cds-WP_152664245.1;Parent=gene-LU631_RS03790;Dbxref=Genbank:WP_152664245.1;Name=WP_152664245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03790;product=hypothetical protein;protein_id=WP_152664245.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 742634 742783 . + . ID=gene-LU631_RS03795;Name=ssb;end_range=742783,.;gbkey=Gene;gene=ssb;gene_biotype=pseudogene;locus_tag=LU631_RS03795;old_locus_tag=LU631_03795;partial=true;pseudo=true;start_range=.,742634 NZ_CP089940.1 Protein Homology CDS 742634 742783 . + 0 ID=cds-LU631_RS03795;Parent=gene-LU631_RS03795;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;end_range=742783,.;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168322.1;locus_tag=LU631_RS03795;partial=true;product=single-stranded DNA-binding protein;pseudo=true;start_range=.,742634;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 742959 744012 . + . ID=gene-LU631_RS03800;Name=LU631_RS03800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03800;old_locus_tag=LU631_03800;pseudo=true NZ_CP089940.1 Protein Homology CDS 742959 744012 . + 0 ID=cds-LU631_RS03800;Parent=gene-LU631_RS03800;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS03800;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 744087 744272 . + . ID=gene-LU631_RS03805;Name=LU631_RS03805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03805;old_locus_tag=LU631_03805;pseudo=true NZ_CP089940.1 Protein Homology CDS 744087 744272 . + 0 ID=cds-LU631_RS03805;Parent=gene-LU631_RS03805;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190699.1;locus_tag=LU631_RS03805;product=DUF2442 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 744312 745075 . - . ID=gene-LU631_RS03810;Name=LU631_RS03810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03810;old_locus_tag=LU631_03810;partial=true;pseudo=true;start_range=.,744312 NZ_CP089940.1 Protein Homology CDS 744312 745075 . - 0 ID=cds-LU631_RS03810;Parent=gene-LU631_RS03810;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS03810;partial=true;product=transposase domain-containing protein;pseudo=true;start_range=.,744312;transl_table=11 NZ_CP089940.1 RefSeq gene 745397 746905 . - . ID=gene-LU631_RS03815;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=LU631_RS03815;old_locus_tag=LU631_03815 NZ_CP089940.1 Protein Homology CDS 745397 746905 . - 0 ID=cds-WP_020322869.1;Parent=gene-LU631_RS03815;Dbxref=Genbank:WP_020322869.1;Name=WP_020322869.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229244.1;locus_tag=LU631_RS03815;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_020322869.1;transl_table=11 NZ_CP089940.1 RefSeq gene 747129 747458 . + . ID=gene-LU631_RS03820;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=LU631_RS03820;old_locus_tag=LU631_03820 NZ_CP089940.1 Protein Homology CDS 747129 747458 . + 0 ID=cds-WP_020322866.1;Parent=gene-LU631_RS03820;Dbxref=Genbank:WP_020322866.1;Name=WP_020322866.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204219.1;locus_tag=LU631_RS03820;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_020322866.1;transl_table=11 NZ_CP089940.1 RefSeq gene 747528 748346 . + . ID=gene-LU631_RS03825;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=LU631_RS03825;old_locus_tag=LU631_03825 NZ_CP089940.1 Protein Homology CDS 747528 748346 . + 0 ID=cds-WP_040465502.1;Parent=gene-LU631_RS03825;Dbxref=Genbank:WP_040465502.1;Name=WP_040465502.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106467.1;locus_tag=LU631_RS03825;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_040465502.1;transl_table=11 NZ_CP089940.1 RefSeq gene 748374 749132 . + . ID=gene-LU631_RS03830;Name=LU631_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03830;old_locus_tag=LU631_03830 NZ_CP089940.1 Protein Homology CDS 748374 749132 . + 0 ID=cds-WP_020322864.1;Parent=gene-LU631_RS03830;Dbxref=Genbank:WP_020322864.1;Name=WP_020322864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=LU631_RS03830;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_020322864.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 749386 750056 . + . ID=gene-LU631_RS03835;Name=LU631_RS03835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS03835;old_locus_tag=LU631_03835;pseudo=true NZ_CP089940.1 Protein Homology CDS 749386 750056 . + 0 ID=cds-LU631_RS03835;Parent=gene-LU631_RS03835;Note=frameshifted%3B internal stop;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012563.2;locus_tag=LU631_RS03835;product=glycogen/starch/alpha-glucan phosphorylase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 750082 750297 . + . ID=gene-LU631_RS25995;Name=LU631_RS25995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25995;pseudo=true NZ_CP089940.1 Protein Homology CDS 750082 750297 . + 0 ID=cds-LU631_RS25995;Parent=gene-LU631_RS25995;Note=internal stop;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012563.2;locus_tag=LU631_RS25995;product=glycogen/starch/alpha-glucan phosphorylase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 750373 751938 . + . ID=gene-LU631_RS03840;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=pseudogene;locus_tag=LU631_RS03840;old_locus_tag=LU631_03840;partial=true;pseudo=true;start_range=.,750373 NZ_CP089940.1 Protein Homology CDS 750373 751938 . + 0 ID=cds-LU631_RS03840;Parent=gene-LU631_RS03840;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005980,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436475.1;locus_tag=LU631_RS03840;partial=true;product=4-alpha-glucanotransferase;pseudo=true;start_range=.,750373;transl_table=11 NZ_CP089940.1 RefSeq gene 751962 752537 . - . ID=gene-LU631_RS03845;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=LU631_RS03845;old_locus_tag=LU631_03845 NZ_CP089940.1 Protein Homology CDS 751962 752537 . - 0 ID=cds-WP_020322858.1;Parent=gene-LU631_RS03845;Dbxref=Genbank:WP_020322858.1;Name=WP_020322858.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=LU631_RS03845;product=Fe-S biogenesis protein NfuA;protein_id=WP_020322858.1;transl_table=11 NZ_CP089940.1 RefSeq gene 752596 753279 . - . ID=gene-LU631_RS03850;Name=LU631_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03850;old_locus_tag=LU631_03850 NZ_CP089940.1 Protein Homology CDS 752596 753279 . - 0 ID=cds-WP_040465451.1;Parent=gene-LU631_RS03850;Dbxref=Genbank:WP_040465451.1;Name=WP_040465451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014604845.1;locus_tag=LU631_RS03850;product=phosphoribosyltransferase;protein_id=WP_040465451.1;transl_table=11 NZ_CP089940.1 RefSeq gene 753314 754090 . + . ID=gene-LU631_RS03855;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=LU631_RS03855;old_locus_tag=LU631_03855 NZ_CP089940.1 Protein Homology CDS 753314 754090 . + 0 ID=cds-WP_020322856.1;Parent=gene-LU631_RS03855;Dbxref=Genbank:WP_020322856.1;Name=WP_020322856.1;Ontology_term=GO:0009102,GO:0003824;gbkey=CDS;gene=bioH;go_function=catalytic activity|0003824||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013510833.1;locus_tag=LU631_RS03855;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_020322856.1;transl_table=11 NZ_CP089940.1 RefSeq gene 754262 754531 . + . ID=gene-LU631_RS03860;Name=LU631_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03860;old_locus_tag=LU631_03860 NZ_CP089940.1 Protein Homology CDS 754262 754531 . + 0 ID=cds-WP_020322855.1;Parent=gene-LU631_RS03860;Dbxref=Genbank:WP_020322855.1;Name=WP_020322855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208921.1;locus_tag=LU631_RS03860;product=DUF1471 domain-containing protein;protein_id=WP_020322855.1;transl_table=11 NZ_CP089940.1 RefSeq gene 755245 757545 . - . ID=gene-LU631_RS03865;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=LU631_RS03865;old_locus_tag=LU631_03865 NZ_CP089940.1 Protein Homology CDS 755245 757545 . - 0 ID=cds-WP_020322854.1;Parent=gene-LU631_RS03865;Dbxref=Genbank:WP_020322854.1;Name=WP_020322854.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091014.1;locus_tag=LU631_RS03865;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_020322854.1;transl_table=11 NZ_CP089940.1 RefSeq gene 757559 757783 . - . ID=gene-LU631_RS03870;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=LU631_RS03870;old_locus_tag=LU631_03870 NZ_CP089940.1 Protein Homology CDS 757559 757783 . - 0 ID=cds-WP_020322853.1;Parent=gene-LU631_RS03870;Dbxref=Genbank:WP_020322853.1;Name=WP_020322853.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246763.1;locus_tag=LU631_RS03870;product=ferrous iron transporter A;protein_id=WP_020322853.1;transl_table=11 NZ_CP089940.1 RefSeq gene 757930 760248 . - . ID=gene-LU631_RS03875;Name=LU631_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03875;old_locus_tag=LU631_03875 NZ_CP089940.1 Protein Homology CDS 757930 760248 . - 0 ID=cds-WP_020322852.1;Parent=gene-LU631_RS03875;Dbxref=Genbank:WP_020322852.1;Name=WP_020322852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171179.1;locus_tag=LU631_RS03875;product=Tex family protein;protein_id=WP_020322852.1;transl_table=11 NZ_CP089940.1 RefSeq gene 760342 760821 . - . ID=gene-LU631_RS03880;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=LU631_RS03880;old_locus_tag=LU631_03880 NZ_CP089940.1 Protein Homology CDS 760342 760821 . - 0 ID=cds-WP_020322851.1;Parent=gene-LU631_RS03880;Dbxref=Genbank:WP_020322851.1;Name=WP_020322851.1;Ontology_term=GO:0006354,GO:0003711;gbkey=CDS;gene=greB;go_function=transcription elongation factor activity|0003711||IEA;go_process=DNA-templated transcription elongation|0006354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899111.1;locus_tag=LU631_RS03880;product=transcription elongation factor GreB;protein_id=WP_020322851.1;transl_table=11 NZ_CP089940.1 RefSeq gene 761125 761844 . + . ID=gene-LU631_RS03885;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=LU631_RS03885;old_locus_tag=LU631_03885 NZ_CP089940.1 Protein Homology CDS 761125 761844 . + 0 ID=cds-WP_001157751.1;Parent=gene-LU631_RS03885;Dbxref=Genbank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014646135.1;locus_tag=LU631_RS03885;product=two-component system response regulator OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_CP089940.1 RefSeq gene 761841 763193 . + . ID=gene-LU631_RS03890;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=LU631_RS03890;old_locus_tag=LU631_03890 NZ_CP089940.1 Protein Homology CDS 761841 763193 . + 0 ID=cds-WP_020322848.1;Parent=gene-LU631_RS03890;Dbxref=Genbank:WP_020322848.1;Name=WP_020322848.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010617402.1;locus_tag=LU631_RS03890;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_020322848.1;transl_table=11 NZ_CP089940.1 RefSeq gene 763294 763677 . + . ID=gene-LU631_RS03895;Name=LU631_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03895;old_locus_tag=LU631_03895 NZ_CP089940.1 GeneMarkS-2+ CDS 763294 763677 . + 0 ID=cds-WP_020322847.1;Parent=gene-LU631_RS03895;Dbxref=Genbank:WP_020322847.1;Name=WP_020322847.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03895;product=hypothetical protein;protein_id=WP_020322847.1;transl_table=11 NZ_CP089940.1 RefSeq gene 763756 765369 . - . ID=gene-LU631_RS03900;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=LU631_RS03900;old_locus_tag=LU631_03900 NZ_CP089940.1 Protein Homology CDS 763756 765369 . - 0 ID=cds-WP_020322846.1;Parent=gene-LU631_RS03900;Dbxref=Genbank:WP_020322846.1;Name=WP_020322846.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004385527.1;locus_tag=LU631_RS03900;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_020322846.1;transl_table=11 NZ_CP089940.1 RefSeq gene 765709 766587 . - . ID=gene-LU631_RS03905;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=LU631_RS03905;old_locus_tag=LU631_03905 NZ_CP089940.1 Protein Homology CDS 765709 766587 . - 0 ID=cds-WP_020322845.1;Parent=gene-LU631_RS03905;Dbxref=Genbank:WP_020322845.1;Name=WP_020322845.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539702.1;locus_tag=LU631_RS03905;product=Hsp33 family molecular chaperone HslO;protein_id=WP_020322845.1;transl_table=11 NZ_CP089940.1 RefSeq gene 766610 767011 . - . ID=gene-LU631_RS03910;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=LU631_RS03910;old_locus_tag=LU631_03910 NZ_CP089940.1 Protein Homology CDS 766610 767011 . - 0 ID=cds-WP_020322844.1;Parent=gene-LU631_RS03910;Dbxref=Genbank:WP_020322844.1;Name=WP_020322844.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003853009.1;locus_tag=LU631_RS03910;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_020322844.1;transl_table=11 NZ_CP089940.1 RefSeq gene 767142 769280 . - . ID=gene-LU631_RS03915;Name=LU631_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03915;old_locus_tag=LU631_03915 NZ_CP089940.1 Protein Homology CDS 767142 769280 . - 0 ID=cds-WP_020322843.1;Parent=gene-LU631_RS03915;Dbxref=Genbank:WP_020322843.1;Name=WP_020322843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442890.1;locus_tag=LU631_RS03915;product=intracellular growth attenuator family protein;protein_id=WP_020322843.1;transl_table=11 NZ_CP089940.1 RefSeq gene 769685 770251 . + . ID=gene-LU631_RS03920;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=LU631_RS03920;old_locus_tag=LU631_03920 NZ_CP089940.1 Protein Homology CDS 769685 770251 . + 0 ID=cds-WP_020322842.1;Parent=gene-LU631_RS03920;Dbxref=Genbank:WP_020322842.1;Name=WP_020322842.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160701.1;locus_tag=LU631_RS03920;product=ADP compounds hydrolase NudE;protein_id=WP_020322842.1;transl_table=11 NZ_CP089940.1 RefSeq gene 770422 770859 . + . ID=gene-LU631_RS03925;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS03925;old_locus_tag=LU631_03925 NZ_CP089940.1 Protein Homology CDS 770422 770859 . + 0 ID=cds-WP_046372172.1-2;Parent=gene-LU631_RS03925;Dbxref=Genbank:WP_046372172.1;Name=WP_046372172.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS03925;product=IS200/IS605 family transposase;protein_id=WP_046372172.1;transl_table=11 NZ_CP089940.1 RefSeq gene 771087 773633 . - . ID=gene-LU631_RS03930;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=LU631_RS03930;old_locus_tag=LU631_03930 NZ_CP089940.1 Protein Homology CDS 771087 773633 . - 0 ID=cds-WP_020322841.1;Parent=gene-LU631_RS03930;Dbxref=Genbank:WP_020322841.1;Name=WP_020322841.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=LU631_RS03930;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_020322841.1;transl_table=11 NZ_CP089940.1 RefSeq gene 773785 774609 . + . ID=gene-LU631_RS03935;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=LU631_RS03935;old_locus_tag=LU631_03935 NZ_CP089940.1 Protein Homology CDS 773785 774609 . + 0 ID=cds-WP_020322840.1;Parent=gene-LU631_RS03935;Dbxref=Genbank:WP_020322840.1;Name=WP_020322840.1;gbkey=CDS;gene=pilM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204198.1;locus_tag=LU631_RS03935;product=pilus assembly protein PilM;protein_id=WP_020322840.1;transl_table=11 NZ_CP089940.1 RefSeq gene 774609 775193 . + . ID=gene-LU631_RS03940;Name=LU631_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03940;old_locus_tag=LU631_03940 NZ_CP089940.1 Protein Homology CDS 774609 775193 . + 0 ID=cds-WP_020322839.1;Parent=gene-LU631_RS03940;Dbxref=Genbank:WP_020322839.1;Name=WP_020322839.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016992.2;locus_tag=LU631_RS03940;product=PilN domain-containing protein;protein_id=WP_020322839.1;transl_table=11 NZ_CP089940.1 RefSeq gene 775183 775686 . + . ID=gene-LU631_RS03945;Name=LU631_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03945;old_locus_tag=LU631_03945 NZ_CP089940.1 GeneMarkS-2+ CDS 775183 775686 . + 0 ID=cds-WP_020322838.1;Parent=gene-LU631_RS03945;Dbxref=Genbank:WP_020322838.1;Name=WP_020322838.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03945;product=hypothetical protein;protein_id=WP_020322838.1;transl_table=11 NZ_CP089940.1 RefSeq gene 775673 776077 . + . ID=gene-LU631_RS03950;Name=LU631_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03950;old_locus_tag=LU631_03950 NZ_CP089940.1 GeneMarkS-2+ CDS 775673 776077 . + 0 ID=cds-WP_082103813.1;Parent=gene-LU631_RS03950;Dbxref=Genbank:WP_082103813.1;Name=WP_082103813.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS03950;product=DNA utilization family protein;protein_id=WP_082103813.1;transl_table=11 NZ_CP089940.1 RefSeq gene 776013 777269 . + . ID=gene-LU631_RS03955;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=LU631_RS03955;old_locus_tag=LU631_03955 NZ_CP089940.1 Protein Homology CDS 776013 777269 . + 0 ID=cds-WP_082103814.1;Parent=gene-LU631_RS03955;Dbxref=Genbank:WP_082103814.1;Name=WP_082103814.1;gbkey=CDS;gene=hofQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004173502.1;locus_tag=LU631_RS03955;product=DNA uptake porin HofQ;protein_id=WP_082103814.1;transl_table=11 NZ_CP089940.1 RefSeq gene 777652 778173 . + . ID=gene-LU631_RS03960;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=LU631_RS03960;old_locus_tag=LU631_03960 NZ_CP089940.1 Protein Homology CDS 777652 778173 . + 0 ID=cds-WP_020322835.1;Parent=gene-LU631_RS03960;Dbxref=Genbank:WP_020322835.1;Name=WP_020322835.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=LU631_RS03960;product=shikimate kinase AroK;protein_id=WP_020322835.1;transl_table=11 NZ_CP089940.1 RefSeq gene 778224 779312 . + . ID=gene-LU631_RS03965;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=LU631_RS03965;old_locus_tag=LU631_03965 NZ_CP089940.1 Protein Homology CDS 778224 779312 . + 0 ID=cds-WP_020322834.1;Parent=gene-LU631_RS03965;Dbxref=Genbank:WP_020322834.1;Name=WP_020322834.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312258.1;locus_tag=LU631_RS03965;product=3-dehydroquinate synthase;protein_id=WP_020322834.1;transl_table=11 NZ_CP089940.1 RefSeq gene 779408 780388 . + . ID=gene-LU631_RS03970;Name=LU631_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03970;old_locus_tag=LU631_03970 NZ_CP089940.1 Protein Homology CDS 779408 780388 . + 0 ID=cds-WP_020322833.1;Parent=gene-LU631_RS03970;Dbxref=Genbank:WP_020322833.1;Name=WP_020322833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542628.1;locus_tag=LU631_RS03970;product=SPOR domain-containing protein;protein_id=WP_020322833.1;transl_table=11 NZ_CP089940.1 RefSeq gene 780515 781336 . + . ID=gene-LU631_RS03975;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=LU631_RS03975;old_locus_tag=LU631_03975 NZ_CP089940.1 Protein Homology CDS 780515 781336 . + 0 ID=cds-WP_020322829.1;Parent=gene-LU631_RS03975;Dbxref=Genbank:WP_020322829.1;Name=WP_020322829.1;Ontology_term=GO:0032775,GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171163.1;locus_tag=LU631_RS03975;product=adenine-specific DNA-methyltransferase;protein_id=WP_020322829.1;transl_table=11 NZ_CP089940.1 RefSeq gene 781390 782076 . + . ID=gene-LU631_RS03980;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=LU631_RS03980;old_locus_tag=LU631_03980 NZ_CP089940.1 Protein Homology CDS 781390 782076 . + 0 ID=cds-WP_020322828.1;Parent=gene-LU631_RS03980;Dbxref=Genbank:WP_020322828.1;Name=WP_020322828.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008107883.1;locus_tag=LU631_RS03980;product=ribulose-phosphate 3-epimerase;protein_id=WP_020322828.1;transl_table=11 NZ_CP089940.1 RefSeq gene 782060 782758 . + . ID=gene-LU631_RS03985;Name=LU631_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03985;old_locus_tag=LU631_03985 NZ_CP089940.1 Protein Homology CDS 782060 782758 . + 0 ID=cds-WP_020322827.1;Parent=gene-LU631_RS03985;Dbxref=Genbank:WP_020322827.1;Name=WP_020322827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171161.1;locus_tag=LU631_RS03985;product=phosphoglycolate phosphatase;protein_id=WP_020322827.1;transl_table=11 NZ_CP089940.1 RefSeq gene 782755 783759 . + . ID=gene-LU631_RS03990;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=LU631_RS03990;old_locus_tag=LU631_03990 NZ_CP089940.1 Protein Homology CDS 782755 783759 . + 0 ID=cds-WP_020322826.1;Parent=gene-LU631_RS03990;Dbxref=Genbank:WP_020322826.1;Name=WP_020322826.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539686.1;locus_tag=LU631_RS03990;product=tryptophan--tRNA ligase;protein_id=WP_020322826.1;transl_table=11 NZ_CP089940.1 RefSeq gene 783798 784199 . - . ID=gene-LU631_RS03995;Name=LU631_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS03995;old_locus_tag=LU631_03995 NZ_CP089940.1 Protein Homology CDS 783798 784199 . - 0 ID=cds-WP_232426834.1;Parent=gene-LU631_RS03995;Dbxref=Genbank:WP_232426834.1;Name=WP_232426834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004165744.1;locus_tag=LU631_RS03995;product=hypothetical protein;protein_id=WP_232426834.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 784390 785667 . + . ID=gene-LU631_RS04000;Name=LU631_RS04000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04000;old_locus_tag=LU631_04000;pseudo=true NZ_CP089940.1 Protein Homology CDS 784390 785667 . + 0 ID=cds-LU631_RS04000;Parent=gene-LU631_RS04000;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899105.1;locus_tag=LU631_RS04000;product=cytosine deaminase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 785713 786897 . - . ID=gene-LU631_RS04005;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=LU631_RS04005;old_locus_tag=LU631_04005 NZ_CP089940.1 Protein Homology CDS 785713 786897 . - 0 ID=cds-WP_020322819.1;Parent=gene-LU631_RS04005;Dbxref=Genbank:WP_020322819.1;Name=WP_020322819.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007892246.1;locus_tag=LU631_RS04005;product=MFS transporter TsgA;protein_id=WP_020322819.1;transl_table=11 NZ_CP089940.1 RefSeq gene 787172 787744 . + . ID=gene-LU631_RS04010;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=LU631_RS04010;old_locus_tag=LU631_04010 NZ_CP089940.1 Protein Homology CDS 787172 787744 . + 0 ID=cds-WP_020322818.1;Parent=gene-LU631_RS04010;Dbxref=Genbank:WP_020322818.1;Name=WP_020322818.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=LU631_RS04010;product=peptidylprolyl isomerase A;protein_id=WP_020322818.1;transl_table=11 NZ_CP089940.1 RefSeq gene 787847 788422 . + . ID=gene-LU631_RS04015;Name=LU631_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04015;old_locus_tag=LU631_04015 NZ_CP089940.1 Protein Homology CDS 787847 788422 . + 0 ID=cds-WP_020322817.1;Parent=gene-LU631_RS04015;Dbxref=Genbank:WP_020322817.1;Name=WP_020322817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171152.1;locus_tag=LU631_RS04015;product=aminodeoxychorismate synthase component II;protein_id=WP_020322817.1;transl_table=11 NZ_CP089940.1 RefSeq gene 788507 789727 . + . ID=gene-LU631_RS04020;Name=LU631_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04020;old_locus_tag=LU631_04020 NZ_CP089940.1 Protein Homology CDS 788507 789727 . + 0 ID=cds-WP_020322816.1;Parent=gene-LU631_RS04020;Dbxref=Genbank:WP_020322816.1;Name=WP_020322816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963792.1;locus_tag=LU631_RS04020;product=aspartate aminotransferase family protein;protein_id=WP_020322816.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 789759 791374 . - . ID=gene-LU631_RS04025;Name=LU631_RS04025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04025;old_locus_tag=LU631_04025;pseudo=true NZ_CP089940.1 Protein Homology CDS 789759 791374 . - 0 ID=cds-LU631_RS04025;Parent=gene-LU631_RS04025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899103.1;locus_tag=LU631_RS04025;product=FUSC family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 791432 792064 . - . ID=gene-LU631_RS04030;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=LU631_RS04030;old_locus_tag=LU631_04030 NZ_CP089940.1 Protein Homology CDS 791432 792064 . - 0 ID=cds-WP_020322815.1;Parent=gene-LU631_RS04030;Dbxref=Genbank:WP_020322815.1;Name=WP_020322815.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462369.1;locus_tag=LU631_RS04030;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_020322815.1;transl_table=11 NZ_CP089940.1 RefSeq gene 792375 792782 . + . ID=gene-LU631_RS04035;Name=LU631_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04035;old_locus_tag=LU631_04035 NZ_CP089940.1 Protein Homology CDS 792375 792782 . + 0 ID=cds-WP_020322814.1;Parent=gene-LU631_RS04035;Dbxref=Genbank:WP_020322814.1;Name=WP_020322814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852949.1;locus_tag=LU631_RS04035;product=OsmC family protein;protein_id=WP_020322814.1;transl_table=11 NZ_CP089940.1 RefSeq gene 792812 793681 . - . ID=gene-LU631_RS04040;Name=LU631_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04040;old_locus_tag=LU631_04040 NZ_CP089940.1 Protein Homology CDS 792812 793681 . - 0 ID=cds-WP_046372173.1;Parent=gene-LU631_RS04040;Dbxref=Genbank:WP_046372173.1;Name=WP_046372173.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417814.1;locus_tag=LU631_RS04040;product=phosphoribulokinase;protein_id=WP_046372173.1;transl_table=11 NZ_CP089940.1 RefSeq gene 793998 794219 . - . ID=gene-LU631_RS04045;Name=LU631_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04045;old_locus_tag=LU631_04045 NZ_CP089940.1 Protein Homology CDS 793998 794219 . - 0 ID=cds-WP_020322812.1;Parent=gene-LU631_RS04045;Dbxref=Genbank:WP_020322812.1;Name=WP_020322812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003023615.1;locus_tag=LU631_RS04045;product=YheU family protein;protein_id=WP_020322812.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 794245 795207 . - . ID=gene-LU631_RS04050;Name=LU631_RS04050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04050;old_locus_tag=LU631_04050;pseudo=true NZ_CP089940.1 Protein Homology CDS 794245 795207 . - 0 ID=cds-LU631_RS04050;Parent=gene-LU631_RS04050;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542614.1;locus_tag=LU631_RS04050;product=hydrolase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 795292 795894 . + . ID=gene-LU631_RS04055;Name=LU631_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04055;old_locus_tag=LU631_04055 NZ_CP089940.1 Protein Homology CDS 795292 795894 . + 0 ID=cds-WP_020322807.1;Parent=gene-LU631_RS04055;Dbxref=Genbank:WP_020322807.1;Name=WP_020322807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852942.1;locus_tag=LU631_RS04055;product=LysE family translocator;protein_id=WP_020322807.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 795954 796715 . + . ID=gene-LU631_RS04060;Name=LU631_RS04060;end_range=796715,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04060;old_locus_tag=LU631_04060;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 795954 796715 . + 0 ID=cds-LU631_RS04060;Parent=gene-LU631_RS04060;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=796715,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS04060;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 797038 798021 . + . ID=gene-LU631_RS04065;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=LU631_RS04065;old_locus_tag=LU631_04065 NZ_CP089940.1 Protein Homology CDS 797038 798021 . + 0 ID=cds-WP_020322804.1;Parent=gene-LU631_RS04065;Dbxref=Genbank:WP_020322804.1;Name=WP_020322804.1;Ontology_term=GO:0055085,GO:0022857,GO:0042597,GO:0043190;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171144.1;locus_tag=LU631_RS04065;product=taurine ABC transporter substrate-binding protein;protein_id=WP_020322804.1;transl_table=11 NZ_CP089940.1 RefSeq gene 798033 798800 . + . ID=gene-LU631_RS04070;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=LU631_RS04070;old_locus_tag=LU631_04070 NZ_CP089940.1 Protein Homology CDS 798033 798800 . + 0 ID=cds-WP_020322803.1;Parent=gene-LU631_RS04070;Dbxref=Genbank:WP_020322803.1;Name=WP_020322803.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;gene=tauB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814805.1;locus_tag=LU631_RS04070;product=taurine ABC transporter ATP-binding subunit;protein_id=WP_020322803.1;transl_table=11 NZ_CP089940.1 RefSeq gene 798797 799621 . + . ID=gene-LU631_RS04075;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=LU631_RS04075;old_locus_tag=LU631_04075 NZ_CP089940.1 Protein Homology CDS 798797 799621 . + 0 ID=cds-WP_020322802.1;Parent=gene-LU631_RS04075;Dbxref=Genbank:WP_020322802.1;Name=WP_020322802.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tauC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308448.1;locus_tag=LU631_RS04075;product=taurine ABC transporter permease TauC;protein_id=WP_020322802.1;transl_table=11 NZ_CP089940.1 RefSeq gene 799622 800461 . + . ID=gene-LU631_RS04080;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=LU631_RS04080;old_locus_tag=LU631_04080 NZ_CP089940.1 Protein Homology CDS 799622 800461 . + 0 ID=cds-WP_020322801.1;Parent=gene-LU631_RS04080;Dbxref=Genbank:WP_020322801.1;Name=WP_020322801.1;Ontology_term=GO:0016491;gbkey=CDS;gene=tauD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171140.1;locus_tag=LU631_RS04080;product=taurine dioxygenase;protein_id=WP_020322801.1;transl_table=11 NZ_CP089940.1 RefSeq gene 800703 802610 . - . ID=gene-LU631_RS04085;Name=LU631_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04085;old_locus_tag=LU631_04085 NZ_CP089940.1 Protein Homology CDS 800703 802610 . - 0 ID=cds-WP_020322799.1;Parent=gene-LU631_RS04085;Dbxref=Genbank:WP_020322799.1;Name=WP_020322799.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229188.1;locus_tag=LU631_RS04085;product=ABC transporter ATP-binding protein;protein_id=WP_020322799.1;transl_table=11 NZ_CP089940.1 RefSeq gene 802839 803390 . + . ID=gene-LU631_RS04090;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=LU631_RS04090;old_locus_tag=LU631_04090 NZ_CP089940.1 Protein Homology CDS 802839 803390 . + 0 ID=cds-WP_020322798.1;Parent=gene-LU631_RS04090;Dbxref=Genbank:WP_020322798.1;Name=WP_020322798.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374173.1;locus_tag=LU631_RS04090;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_020322798.1;transl_table=11 NZ_CP089940.1 RefSeq gene 803391 805196 . + . ID=gene-LU631_RS04095;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=LU631_RS04095;old_locus_tag=LU631_04095 NZ_CP089940.1 Protein Homology CDS 803391 805196 . + 0 ID=cds-WP_020322797.1;Parent=gene-LU631_RS04095;Dbxref=Genbank:WP_020322797.1;Name=WP_020322797.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455504.1;locus_tag=LU631_RS04095;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_020322797.1;transl_table=11 NZ_CP089940.1 RefSeq gene 805205 805399 . + . ID=gene-LU631_RS04100;Name=LU631_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04100;old_locus_tag=LU631_04100 NZ_CP089940.1 Protein Homology CDS 805205 805399 . + 0 ID=cds-WP_020322796.1;Parent=gene-LU631_RS04100;Dbxref=Genbank:WP_020322796.1;Name=WP_020322796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803029.1;locus_tag=LU631_RS04100;product=YheV family putative metal-binding protein;protein_id=WP_020322796.1;transl_table=11 NZ_CP089940.1 RefSeq gene 805536 806057 . + . ID=gene-LU631_RS04105;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=LU631_RS04105;old_locus_tag=LU631_04105 NZ_CP089940.1 Protein Homology CDS 805536 806057 . + 0 ID=cds-WP_020322795.1;Parent=gene-LU631_RS04105;Dbxref=Genbank:WP_020322795.1;Name=WP_020322795.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542604.1;locus_tag=LU631_RS04105;product=peptidylprolyl isomerase;protein_id=WP_020322795.1;transl_table=11 NZ_CP089940.1 RefSeq gene 806188 806403 . - . ID=gene-LU631_RS04110;Name=LU631_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04110;old_locus_tag=LU631_04110 NZ_CP089940.1 Protein Homology CDS 806188 806403 . - 0 ID=cds-WP_020322794.1;Parent=gene-LU631_RS04110;Dbxref=Genbank:WP_020322794.1;Name=WP_020322794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442853.1;locus_tag=LU631_RS04110;product=SlyX family protein;protein_id=WP_020322794.1;transl_table=11 NZ_CP089940.1 RefSeq gene 806690 807529 . + . ID=gene-LU631_RS04115;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=LU631_RS04115;old_locus_tag=LU631_04115 NZ_CP089940.1 Protein Homology CDS 806690 807529 . + 0 ID=cds-WP_020322793.1;Parent=gene-LU631_RS04115;Dbxref=Genbank:WP_020322793.1;Name=WP_020322793.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359250.1;locus_tag=LU631_RS04115;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_020322793.1;transl_table=11 NZ_CP089940.1 RefSeq gene 807726 808448 . + . ID=gene-LU631_RS04120;Name=LU631_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04120;old_locus_tag=LU631_04120 NZ_CP089940.1 Protein Homology CDS 807726 808448 . + 0 ID=cds-WP_020322792.1;Parent=gene-LU631_RS04120;Dbxref=Genbank:WP_020322792.1;Name=WP_020322792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312224.2;locus_tag=LU631_RS04120;product=transcriptional regulator;protein_id=WP_020322792.1;transl_table=11 NZ_CP089940.1 RefSeq gene 808448 808834 . + . ID=gene-LU631_RS04125;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=LU631_RS04125;old_locus_tag=LU631_04125 NZ_CP089940.1 Protein Homology CDS 808448 808834 . + 0 ID=cds-WP_020322791.1;Parent=gene-LU631_RS04125;Dbxref=Genbank:WP_020322791.1;Name=WP_020322791.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960724.1;locus_tag=LU631_RS04125;product=sulfurtransferase complex subunit TusD;protein_id=WP_020322791.1;transl_table=11 NZ_CP089940.1 RefSeq gene 808834 809193 . + . ID=gene-LU631_RS04130;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=LU631_RS04130;old_locus_tag=LU631_04130 NZ_CP089940.1 Protein Homology CDS 808834 809193 . + 0 ID=cds-WP_020322788.1;Parent=gene-LU631_RS04130;Dbxref=Genbank:WP_020322788.1;Name=WP_020322788.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160606.1;locus_tag=LU631_RS04130;product=sulfurtransferase complex subunit TusC;protein_id=WP_020322788.1;transl_table=11 NZ_CP089940.1 RefSeq gene 809200 809487 . + . ID=gene-LU631_RS04135;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=LU631_RS04135;old_locus_tag=LU631_04135 NZ_CP089940.1 Protein Homology CDS 809200 809487 . + 0 ID=cds-WP_020322787.1;Parent=gene-LU631_RS04135;Dbxref=Genbank:WP_020322787.1;Name=WP_020322787.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160605.1;locus_tag=LU631_RS04135;product=sulfurtransferase complex subunit TusB;protein_id=WP_020322787.1;transl_table=11 NZ_CP089940.1 RefSeq gene 809614 809988 . + . ID=gene-LU631_RS04140;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=LU631_RS04140;old_locus_tag=LU631_04140 NZ_CP089940.1 Protein Homology CDS 809614 809988 . + 0 ID=cds-WP_013204141.1;Parent=gene-LU631_RS04140;Dbxref=Genbank:WP_013204141.1;Name=WP_013204141.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=LU631_RS04140;product=30S ribosomal protein S12;protein_id=WP_013204141.1;transl_table=11 NZ_CP089940.1 RefSeq gene 810085 810555 . + . ID=gene-LU631_RS04145;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=LU631_RS04145;old_locus_tag=LU631_04145 NZ_CP089940.1 Protein Homology CDS 810085 810555 . + 0 ID=cds-WP_017350059.1;Parent=gene-LU631_RS04145;Dbxref=Genbank:WP_017350059.1;Name=WP_017350059.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=LU631_RS04145;product=30S ribosomal protein S7;protein_id=WP_017350059.1;transl_table=11 NZ_CP089940.1 RefSeq gene 810643 812757 . + . ID=gene-LU631_RS04150;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LU631_RS04150;old_locus_tag=LU631_04150 NZ_CP089940.1 Protein Homology CDS 810643 812757 . + 0 ID=cds-WP_020322786.1;Parent=gene-LU631_RS04150;Dbxref=Genbank:WP_020322786.1;Name=WP_020322786.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=LU631_RS04150;product=elongation factor G;protein_id=WP_020322786.1;transl_table=11 NZ_CP089940.1 RefSeq gene 812828 814012 . + . ID=gene-LU631_RS04155;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LU631_RS04155;old_locus_tag=LU631_04155 NZ_CP089940.1 Protein Homology CDS 812828 814012 . + 0 ID=cds-WP_020322785.1;Parent=gene-LU631_RS04155;Dbxref=Genbank:WP_020322785.1;Name=WP_020322785.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312930.1;locus_tag=LU631_RS04155;product=elongation factor Tu;protein_id=WP_020322785.1;transl_table=11 NZ_CP089940.1 RefSeq gene 814199 814801 . + . ID=gene-LU631_RS04160;Name=LU631_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04160;old_locus_tag=LU631_04160 NZ_CP089940.1 Protein Homology CDS 814199 814801 . + 0 ID=cds-WP_020322784.1;Parent=gene-LU631_RS04160;Dbxref=Genbank:WP_020322784.1;Name=WP_020322784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192362.1;locus_tag=LU631_RS04160;product=hypothetical protein;protein_id=WP_020322784.1;transl_table=11 NZ_CP089940.1 RefSeq gene 814798 815211 . + . ID=gene-LU631_RS04165;Name=LU631_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04165;old_locus_tag=LU631_04165 NZ_CP089940.1 GeneMarkS-2+ CDS 814798 815211 . + 0 ID=cds-WP_020322783.1;Parent=gene-LU631_RS04165;Dbxref=Genbank:WP_020322783.1;Name=WP_020322783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS04165;product=hypothetical protein;protein_id=WP_020322783.1;transl_table=11 NZ_CP089940.1 RefSeq gene 815478 815789 . + . ID=gene-LU631_RS04170;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=LU631_RS04170;old_locus_tag=LU631_04170 NZ_CP089940.1 Protein Homology CDS 815478 815789 . + 0 ID=cds-WP_001181005.1;Parent=gene-LU631_RS04170;Dbxref=Genbank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=LU631_RS04170;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_CP089940.1 RefSeq gene 815822 816451 . + . ID=gene-LU631_RS04175;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=LU631_RS04175;old_locus_tag=LU631_04175 NZ_CP089940.1 Protein Homology CDS 815822 816451 . + 0 ID=cds-WP_020322782.1;Parent=gene-LU631_RS04175;Dbxref=Genbank:WP_020322782.1;Name=WP_020322782.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=LU631_RS04175;product=50S ribosomal protein L3;protein_id=WP_020322782.1;transl_table=11 NZ_CP089940.1 RefSeq gene 816462 817067 . + . ID=gene-LU631_RS04180;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=LU631_RS04180;old_locus_tag=LU631_04180 NZ_CP089940.1 Protein Homology CDS 816462 817067 . + 0 ID=cds-WP_020322781.1;Parent=gene-LU631_RS04180;Dbxref=Genbank:WP_020322781.1;Name=WP_020322781.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=LU631_RS04180;product=50S ribosomal protein L4;protein_id=WP_020322781.1;transl_table=11 NZ_CP089940.1 RefSeq gene 817064 817366 . + . ID=gene-LU631_RS04185;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=LU631_RS04185;old_locus_tag=LU631_04185 NZ_CP089940.1 Protein Homology CDS 817064 817366 . + 0 ID=cds-WP_020322779.1;Parent=gene-LU631_RS04185;Dbxref=Genbank:WP_020322779.1;Name=WP_020322779.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=LU631_RS04185;product=50S ribosomal protein L23;protein_id=WP_020322779.1;transl_table=11 NZ_CP089940.1 RefSeq gene 817384 818205 . + . ID=gene-LU631_RS04190;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=LU631_RS04190;old_locus_tag=LU631_04190 NZ_CP089940.1 Protein Homology CDS 817384 818205 . + 0 ID=cds-WP_020322778.1;Parent=gene-LU631_RS04190;Dbxref=Genbank:WP_020322778.1;Name=WP_020322778.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=LU631_RS04190;product=50S ribosomal protein L2;protein_id=WP_020322778.1;transl_table=11 NZ_CP089940.1 RefSeq gene 818222 818500 . + . ID=gene-LU631_RS04195;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=LU631_RS04195;old_locus_tag=LU631_04195 NZ_CP089940.1 Protein Homology CDS 818222 818500 . + 0 ID=cds-WP_013204132.1;Parent=gene-LU631_RS04195;Dbxref=Genbank:WP_013204132.1;Name=WP_013204132.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=LU631_RS04195;product=30S ribosomal protein S19;protein_id=WP_013204132.1;transl_table=11 NZ_CP089940.1 RefSeq gene 818513 818845 . + . ID=gene-LU631_RS04200;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=LU631_RS04200;old_locus_tag=LU631_04200 NZ_CP089940.1 Protein Homology CDS 818513 818845 . + 0 ID=cds-WP_020322777.1;Parent=gene-LU631_RS04200;Dbxref=Genbank:WP_020322777.1;Name=WP_020322777.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=LU631_RS04200;product=50S ribosomal protein L22;protein_id=WP_020322777.1;transl_table=11 NZ_CP089940.1 RefSeq gene 818863 819561 . + . ID=gene-LU631_RS04205;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=LU631_RS04205;old_locus_tag=LU631_04205 NZ_CP089940.1 Protein Homology CDS 818863 819561 . + 0 ID=cds-WP_020322775.1;Parent=gene-LU631_RS04205;Dbxref=Genbank:WP_020322775.1;Name=WP_020322775.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=LU631_RS04205;product=30S ribosomal protein S3;protein_id=WP_020322775.1;transl_table=11 NZ_CP089940.1 RefSeq gene 819574 819984 . + . ID=gene-LU631_RS04210;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=LU631_RS04210;old_locus_tag=LU631_04210 NZ_CP089940.1 Protein Homology CDS 819574 819984 . + 0 ID=cds-WP_002919759.1;Parent=gene-LU631_RS04210;Dbxref=Genbank:WP_002919759.1;Name=WP_002919759.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=LU631_RS04210;product=50S ribosomal protein L16;protein_id=WP_002919759.1;transl_table=11 NZ_CP089940.1 RefSeq gene 819984 820175 . + . ID=gene-LU631_RS04215;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=LU631_RS04215;old_locus_tag=LU631_04215 NZ_CP089940.1 Protein Homology CDS 819984 820175 . + 0 ID=cds-WP_020322773.1;Parent=gene-LU631_RS04215;Dbxref=Genbank:WP_020322773.1;Name=WP_020322773.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929762.1;locus_tag=LU631_RS04215;product=50S ribosomal protein L29;protein_id=WP_020322773.1;transl_table=11 NZ_CP089940.1 RefSeq gene 820175 820429 . + . ID=gene-LU631_RS04220;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=LU631_RS04220;old_locus_tag=LU631_04220 NZ_CP089940.1 Protein Homology CDS 820175 820429 . + 0 ID=cds-WP_020322772.1;Parent=gene-LU631_RS04220;Dbxref=Genbank:WP_020322772.1;Name=WP_020322772.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=LU631_RS04220;product=30S ribosomal protein S17;protein_id=WP_020322772.1;transl_table=11 NZ_CP089940.1 RefSeq gene 820596 820967 . + . ID=gene-LU631_RS04225;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=LU631_RS04225;old_locus_tag=LU631_04225 NZ_CP089940.1 Protein Homology CDS 820596 820967 . + 0 ID=cds-WP_020322771.1;Parent=gene-LU631_RS04225;Dbxref=Genbank:WP_020322771.1;Name=WP_020322771.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=LU631_RS04225;product=50S ribosomal protein L14;protein_id=WP_020322771.1;transl_table=11 NZ_CP089940.1 RefSeq gene 820978 821292 . + . ID=gene-LU631_RS04230;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=LU631_RS04230;old_locus_tag=LU631_04230 NZ_CP089940.1 Protein Homology CDS 820978 821292 . + 0 ID=cds-WP_020322770.1;Parent=gene-LU631_RS04230;Dbxref=Genbank:WP_020322770.1;Name=WP_020322770.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=LU631_RS04230;product=50S ribosomal protein L24;protein_id=WP_020322770.1;transl_table=11 NZ_CP089940.1 RefSeq gene 821307 821846 . + . ID=gene-LU631_RS04235;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=LU631_RS04235;old_locus_tag=LU631_04235 NZ_CP089940.1 Protein Homology CDS 821307 821846 . + 0 ID=cds-WP_020322769.1;Parent=gene-LU631_RS04235;Dbxref=Genbank:WP_020322769.1;Name=WP_020322769.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=LU631_RS04235;product=50S ribosomal protein L5;protein_id=WP_020322769.1;transl_table=11 NZ_CP089940.1 RefSeq gene 821861 822166 . + . ID=gene-LU631_RS04240;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=LU631_RS04240;old_locus_tag=LU631_04240 NZ_CP089940.1 Protein Homology CDS 821861 822166 . + 0 ID=cds-WP_020322768.1;Parent=gene-LU631_RS04240;Dbxref=Genbank:WP_020322768.1;Name=WP_020322768.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=LU631_RS04240;product=30S ribosomal protein S14;protein_id=WP_020322768.1;transl_table=11 NZ_CP089940.1 RefSeq gene 822197 822589 . + . ID=gene-LU631_RS04245;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=LU631_RS04245;old_locus_tag=LU631_04245 NZ_CP089940.1 Protein Homology CDS 822197 822589 . + 0 ID=cds-WP_020322766.1;Parent=gene-LU631_RS04245;Dbxref=Genbank:WP_020322766.1;Name=WP_020322766.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=LU631_RS04245;product=30S ribosomal protein S8;protein_id=WP_020322766.1;transl_table=11 NZ_CP089940.1 RefSeq gene 822601 823134 . + . ID=gene-LU631_RS04250;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=LU631_RS04250;old_locus_tag=LU631_04250 NZ_CP089940.1 Protein Homology CDS 822601 823134 . + 0 ID=cds-WP_020322765.1;Parent=gene-LU631_RS04250;Dbxref=Genbank:WP_020322765.1;Name=WP_020322765.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=LU631_RS04250;product=50S ribosomal protein L6;protein_id=WP_020322765.1;transl_table=11 NZ_CP089940.1 RefSeq gene 823144 823497 . + . ID=gene-LU631_RS04255;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=LU631_RS04255;old_locus_tag=LU631_04255 NZ_CP089940.1 Protein Homology CDS 823144 823497 . + 0 ID=cds-WP_020322764.1;Parent=gene-LU631_RS04255;Dbxref=Genbank:WP_020322764.1;Name=WP_020322764.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=LU631_RS04255;product=50S ribosomal protein L18;protein_id=WP_020322764.1;transl_table=11 NZ_CP089940.1 RefSeq gene 823512 824012 . + . ID=gene-LU631_RS04260;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=LU631_RS04260;old_locus_tag=LU631_04260 NZ_CP089940.1 Protein Homology CDS 823512 824012 . + 0 ID=cds-WP_020322763.1;Parent=gene-LU631_RS04260;Dbxref=Genbank:WP_020322763.1;Name=WP_020322763.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445361.1;locus_tag=LU631_RS04260;product=30S ribosomal protein S5;protein_id=WP_020322763.1;transl_table=11 NZ_CP089940.1 RefSeq gene 824018 824197 . + . ID=gene-LU631_RS04265;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=LU631_RS04265;old_locus_tag=LU631_04265 NZ_CP089940.1 Protein Homology CDS 824018 824197 . + 0 ID=cds-WP_004160569.1;Parent=gene-LU631_RS04265;Dbxref=Genbank:WP_004160569.1;Name=WP_004160569.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=LU631_RS04265;product=50S ribosomal protein L30;protein_id=WP_004160569.1;transl_table=11 NZ_CP089940.1 RefSeq gene 824201 824635 . + . ID=gene-LU631_RS04270;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=LU631_RS04270;old_locus_tag=LU631_04270 NZ_CP089940.1 Protein Homology CDS 824201 824635 . + 0 ID=cds-WP_020322762.1;Parent=gene-LU631_RS04270;Dbxref=Genbank:WP_020322762.1;Name=WP_020322762.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=LU631_RS04270;product=50S ribosomal protein L15;protein_id=WP_020322762.1;transl_table=11 NZ_CP089940.1 RefSeq gene 824643 825974 . + . ID=gene-LU631_RS04275;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=LU631_RS04275;old_locus_tag=LU631_04275 NZ_CP089940.1 Protein Homology CDS 824643 825974 . + 0 ID=cds-WP_020322761.1;Parent=gene-LU631_RS04275;Dbxref=Genbank:WP_020322761.1;Name=WP_020322761.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312192.1;locus_tag=LU631_RS04275;product=preprotein translocase subunit SecY;protein_id=WP_020322761.1;transl_table=11 NZ_CP089940.1 RefSeq gene 826006 826122 . + . ID=gene-LU631_RS04280;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=LU631_RS04280;old_locus_tag=LU631_04280 NZ_CP089940.1 Protein Homology CDS 826006 826122 . + 0 ID=cds-WP_020322760.1;Parent=gene-LU631_RS04280;Dbxref=Genbank:WP_020322760.1;Name=WP_020322760.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=LU631_RS04280;product=50S ribosomal protein L36;protein_id=WP_020322760.1;transl_table=11 NZ_CP089940.1 RefSeq gene 826259 826615 . + . ID=gene-LU631_RS04285;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=LU631_RS04285;old_locus_tag=LU631_04285 NZ_CP089940.1 Protein Homology CDS 826259 826615 . + 0 ID=cds-WP_020322759.1;Parent=gene-LU631_RS04285;Dbxref=Genbank:WP_020322759.1;Name=WP_020322759.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=LU631_RS04285;product=30S ribosomal protein S13;protein_id=WP_020322759.1;transl_table=11 NZ_CP089940.1 RefSeq gene 826632 827021 . + . ID=gene-LU631_RS04290;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=LU631_RS04290;old_locus_tag=LU631_04290 NZ_CP089940.1 Protein Homology CDS 826632 827021 . + 0 ID=cds-WP_020322758.1;Parent=gene-LU631_RS04290;Dbxref=Genbank:WP_020322758.1;Name=WP_020322758.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=LU631_RS04290;product=30S ribosomal protein S11;protein_id=WP_020322758.1;transl_table=11 NZ_CP089940.1 RefSeq gene 827054 827674 . + . ID=gene-LU631_RS04295;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=LU631_RS04295;old_locus_tag=LU631_04295 NZ_CP089940.1 Protein Homology CDS 827054 827674 . + 0 ID=cds-WP_020322757.1;Parent=gene-LU631_RS04295;Dbxref=Genbank:WP_020322757.1;Name=WP_020322757.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=LU631_RS04295;product=30S ribosomal protein S4;protein_id=WP_020322757.1;transl_table=11 NZ_CP089940.1 RefSeq gene 827700 828689 . + . ID=gene-LU631_RS04300;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=LU631_RS04300;old_locus_tag=LU631_04300 NZ_CP089940.1 Protein Homology CDS 827700 828689 . + 0 ID=cds-WP_020322756.1;Parent=gene-LU631_RS04300;Dbxref=Genbank:WP_020322756.1;Name=WP_020322756.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=LU631_RS04300;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_020322756.1;transl_table=11 NZ_CP089940.1 RefSeq gene 828730 829116 . + . ID=gene-LU631_RS04305;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=LU631_RS04305;old_locus_tag=LU631_04305 NZ_CP089940.1 Protein Homology CDS 828730 829116 . + 0 ID=cds-WP_020322755.1;Parent=gene-LU631_RS04305;Dbxref=Genbank:WP_020322755.1;Name=WP_020322755.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229143.1;locus_tag=LU631_RS04305;product=50S ribosomal protein L17;protein_id=WP_020322755.1;transl_table=11 NZ_CP089940.1 RefSeq gene 829221 829580 . + . ID=gene-LU631_RS04310;Name=LU631_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04310;old_locus_tag=LU631_04310 NZ_CP089940.1 Protein Homology CDS 829221 829580 . + 0 ID=cds-WP_020322754.1;Parent=gene-LU631_RS04310;Dbxref=Genbank:WP_020322754.1;Name=WP_020322754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807052.1;locus_tag=LU631_RS04310;product=DUF1992 domain-containing protein;protein_id=WP_020322754.1;transl_table=11 NZ_CP089940.1 RefSeq gene 829580 830002 . + . ID=gene-LU631_RS04315;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=LU631_RS04315;old_locus_tag=LU631_04315 NZ_CP089940.1 Protein Homology CDS 829580 830002 . + 0 ID=cds-WP_020322752.1;Parent=gene-LU631_RS04315;Dbxref=Genbank:WP_020322752.1;Name=WP_020322752.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539642.1;locus_tag=LU631_RS04315;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_020322752.1;transl_table=11 NZ_CP089940.1 RefSeq gene 830140 830837 . - . ID=gene-LU631_RS04320;Name=LU631_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04320;old_locus_tag=LU631_04320 NZ_CP089940.1 Protein Homology CDS 830576 830837 . - 0 ID=cds-WP_233481987.1;Parent=gene-LU631_RS04320;Dbxref=Genbank:WP_233481987.1;Name=WP_233481987.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS04320;product=IS1 family transposase;protein_id=WP_233481987.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 830140 830576 . - 2 ID=cds-WP_233481987.1;Parent=gene-LU631_RS04320;Dbxref=Genbank:WP_233481987.1;Name=WP_233481987.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS04320;product=IS1 family transposase;protein_id=WP_233481987.1;transl_table=11 NZ_CP089940.1 RefSeq gene 831015 832235 . - . ID=gene-LU631_RS04325;Name=LU631_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04325;old_locus_tag=LU631_04325 NZ_CP089940.1 Protein Homology CDS 831015 832235 . - 0 ID=cds-WP_046372176.1;Parent=gene-LU631_RS04325;Dbxref=Genbank:WP_046372176.1;Name=WP_046372176.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025244073.1;locus_tag=LU631_RS04325;product=ISL3 family transposase;protein_id=WP_046372176.1;transl_table=11 NZ_CP089940.1 RefSeq gene 832415 833623 . - . ID=gene-LU631_RS04330;Name=LU631_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04330;old_locus_tag=LU631_04330 NZ_CP089940.1 Protein Homology CDS 832415 833623 . - 0 ID=cds-WP_046372177.1;Parent=gene-LU631_RS04330;Dbxref=Genbank:WP_046372177.1;Name=WP_046372177.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS04330;product=IS256 family transposase;protein_id=WP_046372177.1;transl_table=11 NZ_CP089940.1 RefSeq gene 833671 834057 . - . ID=gene-LU631_RS04335;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=LU631_RS04335;old_locus_tag=LU631_04335 NZ_CP089940.1 Protein Homology CDS 833671 834057 . - 0 ID=cds-WP_046372353.1;Parent=gene-LU631_RS04335;Dbxref=Genbank:WP_046372353.1;Name=WP_046372353.1;Ontology_term=GO:0034220,GO:0008381;gbkey=CDS;gene=mscL;go_function=mechanosensitive ion channel activity|0008381||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160553.1;locus_tag=LU631_RS04335;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_046372353.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 834091 834625 . - . ID=gene-LU631_RS04340;Name=LU631_RS04340;end_range=834625,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04340;old_locus_tag=LU631_04340;partial=true;pseudo=true;start_range=.,834091 NZ_CP089940.1 Protein Homology CDS 834091 834625 . - 2 ID=cds-LU631_RS04340;Parent=gene-LU631_RS04340;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=834625,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611700.1;locus_tag=LU631_RS04340;partial=true;product=hypothetical protein;pseudo=true;start_range=.,834091;transl_table=11 NZ_CP089940.1 RefSeq gene 834686 835806 . - . ID=gene-LU631_RS04345;Name=LU631_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04345;old_locus_tag=LU631_04345 NZ_CP089940.1 Protein Homology CDS 835548 835806 . - 0 ID=cds-WP_152664246.1;Parent=gene-LU631_RS04345;Dbxref=Genbank:WP_152664246.1;Name=WP_152664246.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS04345;product=IS3 family transposase;protein_id=WP_152664246.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 834686 835548 . - 2 ID=cds-WP_152664246.1;Parent=gene-LU631_RS04345;Dbxref=Genbank:WP_152664246.1;Name=WP_152664246.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS04345;product=IS3 family transposase;protein_id=WP_152664246.1;transl_table=11 NZ_CP089940.1 RefSeq gene 836089 837129 . - . ID=gene-LU631_RS04350;Name=LU631_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04350;old_locus_tag=LU631_04350 NZ_CP089940.1 Protein Homology CDS 836089 837129 . - 0 ID=cds-WP_046371813.1-4;Parent=gene-LU631_RS04350;Dbxref=Genbank:WP_046371813.1;Name=WP_046371813.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS04350;product=IS481 family transposase;protein_id=WP_046371813.1;transl_table=11 NZ_CP089940.1 RefSeq gene 837376 837924 . - . ID=gene-LU631_RS04355;Name=LU631_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04355;old_locus_tag=LU631_04355 NZ_CP089940.1 GeneMarkS-2+ CDS 837376 837924 . - 0 ID=cds-WP_020322745.1;Parent=gene-LU631_RS04355;Dbxref=Genbank:WP_020322745.1;Name=WP_020322745.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS04355;product=transcriptional regulator;protein_id=WP_020322745.1;transl_table=11 NZ_CP089940.1 RefSeq gene 838071 838337 . + . ID=gene-LU631_RS04360;Name=LU631_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04360;old_locus_tag=LU631_04360 NZ_CP089940.1 Protein Homology CDS 838071 838337 . + 0 ID=cds-WP_020322744.1;Parent=gene-LU631_RS04360;Dbxref=Genbank:WP_020322744.1;Name=WP_020322744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114533.1;locus_tag=LU631_RS04360;product=helix-turn-helix domain-containing protein;protein_id=WP_020322744.1;transl_table=11 NZ_CP089940.1 RefSeq gene 838352 839935 . + . ID=gene-LU631_RS04365;Name=LU631_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04365;old_locus_tag=LU631_04365 NZ_CP089940.1 Protein Homology CDS 838352 839935 . + 0 ID=cds-WP_071598886.1;Parent=gene-LU631_RS04365;Dbxref=Genbank:WP_071598886.1;Name=WP_071598886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192741.1;locus_tag=LU631_RS04365;product=Mu transposase C-terminal domain-containing protein;protein_id=WP_071598886.1;transl_table=11 NZ_CP089940.1 RefSeq gene 839946 840866 . + . ID=gene-LU631_RS04370;Name=LU631_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04370;old_locus_tag=LU631_04370 NZ_CP089940.1 Protein Homology CDS 839946 840866 . + 0 ID=cds-WP_020322742.1;Parent=gene-LU631_RS04370;Dbxref=Genbank:WP_020322742.1;Name=WP_020322742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192740.1;locus_tag=LU631_RS04370;product=AAA family ATPase;protein_id=WP_020322742.1;transl_table=11 NZ_CP089940.1 RefSeq gene 840877 841275 . + . ID=gene-LU631_RS04375;Name=LU631_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04375;old_locus_tag=LU631_04375 NZ_CP089940.1 GeneMarkS-2+ CDS 840877 841275 . + 0 ID=cds-WP_020322741.1;Parent=gene-LU631_RS04375;Dbxref=Genbank:WP_020322741.1;Name=WP_020322741.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS04375;product=hypothetical protein;protein_id=WP_020322741.1;transl_table=11 NZ_CP089940.1 RefSeq gene 841296 841520 . + . ID=gene-LU631_RS04380;Name=LU631_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04380;old_locus_tag=LU631_04380 NZ_CP089940.1 Protein Homology CDS 841296 841520 . + 0 ID=cds-WP_020322740.1;Parent=gene-LU631_RS04380;Dbxref=Genbank:WP_020322740.1;Name=WP_020322740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361028.1;locus_tag=LU631_RS04380;product=hypothetical protein;protein_id=WP_020322740.1;transl_table=11 NZ_CP089940.1 RefSeq gene 841774 841968 . + . ID=gene-LU631_RS04385;Name=LU631_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04385;old_locus_tag=LU631_04385 NZ_CP089940.1 GeneMarkS-2+ CDS 841774 841968 . + 0 ID=cds-WP_020322738.1;Parent=gene-LU631_RS04385;Dbxref=Genbank:WP_020322738.1;Name=WP_020322738.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS04385;product=hypothetical protein;protein_id=WP_020322738.1;transl_table=11 NZ_CP089940.1 RefSeq gene 841969 842196 . + . ID=gene-LU631_RS04390;Name=LU631_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04390;old_locus_tag=LU631_04390 NZ_CP089940.1 Protein Homology CDS 841969 842196 . + 0 ID=cds-WP_020322737.1;Parent=gene-LU631_RS04390;Dbxref=Genbank:WP_020322737.1;Name=WP_020322737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192738.1;locus_tag=LU631_RS04390;product=hypothetical protein;protein_id=WP_020322737.1;transl_table=11 NZ_CP089940.1 RefSeq gene 842251 842811 . + . ID=gene-LU631_RS04395;Name=LU631_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04395;old_locus_tag=LU631_04395 NZ_CP089940.1 Protein Homology CDS 842251 842811 . + 0 ID=cds-WP_233481988.1;Parent=gene-LU631_RS04395;Dbxref=Genbank:WP_233481988.1;Name=WP_233481988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095200.1;locus_tag=LU631_RS04395;product=DUF3164 family protein;protein_id=WP_233481988.1;transl_table=11 NZ_CP089940.1 RefSeq gene 842813 843046 . + . ID=gene-LU631_RS04400;Name=LU631_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04400;old_locus_tag=LU631_04400 NZ_CP089940.1 Protein Homology CDS 842813 843046 . + 0 ID=cds-WP_046372180.1;Parent=gene-LU631_RS04400;Dbxref=Genbank:WP_046372180.1;Name=WP_046372180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553850.1;locus_tag=LU631_RS04400;product=ANR family transcriptional regulator;protein_id=WP_046372180.1;transl_table=11 NZ_CP089940.1 RefSeq gene 843027 843218 . + . ID=gene-LU631_RS04405;Name=LU631_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04405;old_locus_tag=LU631_04405 NZ_CP089940.1 Protein Homology CDS 843027 843218 . + 0 ID=cds-WP_046372181.1;Parent=gene-LU631_RS04405;Dbxref=Genbank:WP_046372181.1;Name=WP_046372181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644728.1;locus_tag=LU631_RS04405;product=hypothetical protein;protein_id=WP_046372181.1;transl_table=11 NZ_CP089940.1 RefSeq gene 843296 843511 . + . ID=gene-LU631_RS04410;Name=LU631_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04410;old_locus_tag=LU631_04410 NZ_CP089940.1 GeneMarkS-2+ CDS 843296 843511 . + 0 ID=cds-WP_046372182.1;Parent=gene-LU631_RS04410;Dbxref=Genbank:WP_046372182.1;Name=WP_046372182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS04410;product=hypothetical protein;protein_id=WP_046372182.1;transl_table=11 NZ_CP089940.1 RefSeq gene 843691 845220 . + . ID=gene-LU631_RS04415;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=LU631_RS04415;old_locus_tag=LU631_04415 NZ_CP089940.1 Protein Homology CDS 843691 845220 . + 0 ID=cds-WP_046372016.1;Parent=gene-LU631_RS04415;Dbxref=Genbank:WP_046372016.1;Name=WP_046372016.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001907982.1;locus_tag=LU631_RS04415;product=IS21 family transposase;protein_id=WP_046372016.1;transl_table=11 NZ_CP089940.1 RefSeq gene 845231 845971 . + . ID=gene-LU631_RS04420;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=LU631_RS04420;old_locus_tag=LU631_04420 NZ_CP089940.1 Protein Homology CDS 845231 845971 . + 0 ID=cds-WP_046372183.1;Parent=gene-LU631_RS04420;Dbxref=Genbank:WP_046372183.1;Name=WP_046372183.1;Ontology_term=GO:0005524;gbkey=CDS;gene=istB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802959.1;locus_tag=LU631_RS04420;product=IS21-like element helper ATPase IstB;protein_id=WP_046372183.1;transl_table=11 NZ_CP089940.1 RefSeq gene 846143 846298 . + . ID=gene-LU631_RS04425;Name=LU631_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04425;old_locus_tag=LU631_04425 NZ_CP089940.1 Protein Homology CDS 846143 846298 . + 0 ID=cds-WP_020322734.1;Parent=gene-LU631_RS04425;Dbxref=Genbank:WP_020322734.1;Name=WP_020322734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536757.1;locus_tag=LU631_RS04425;product=DUF1378 family protein;protein_id=WP_020322734.1;transl_table=11 NZ_CP089940.1 RefSeq gene 846365 847018 . - . ID=gene-LU631_RS26000;Name=LU631_RS26000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26000 NZ_CP089940.1 Protein Homology CDS 846365 847018 . - 0 ID=cds-WP_051124347.1;Parent=gene-LU631_RS26000;Dbxref=Genbank:WP_051124347.1;Name=WP_051124347.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF013884.2;locus_tag=LU631_RS26000;product=acyltransferase;protein_id=WP_051124347.1;transl_table=11 NZ_CP089940.1 RefSeq gene 847039 847473 . - . ID=gene-LU631_RS26005;Name=LU631_RS26005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26005 NZ_CP089940.1 Protein Homology CDS 847039 847473 . - 0 ID=cds-WP_051124346.1;Parent=gene-LU631_RS26005;Dbxref=Genbank:WP_051124346.1;Name=WP_051124346.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013884.2;locus_tag=LU631_RS26005;product=acyltransferase;protein_id=WP_051124346.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 847750 848533 . + . ID=gene-LU631_RS04435;Name=LU631_RS04435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04435;old_locus_tag=LU631_04435;pseudo=true NZ_CP089940.1 Protein Homology CDS 847750 848533 . + 0 ID=cds-LU631_RS04435;Parent=gene-LU631_RS04435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192697.1;locus_tag=LU631_RS04435;product=DNA adenine methylase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 848502 848738 . - . ID=gene-LU631_RS04440;Name=LU631_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04440;old_locus_tag=LU631_04440 NZ_CP089940.1 Protein Homology CDS 848502 848738 . - 0 ID=cds-WP_020322732.1;Parent=gene-LU631_RS04440;Dbxref=Genbank:WP_020322732.1;Name=WP_020322732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088781.1;locus_tag=LU631_RS04440;product=hypothetical protein;protein_id=WP_020322732.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 848965 849173 . - . ID=gene-LU631_RS04445;Name=LU631_RS04445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04445;old_locus_tag=LU631_04445;partial=true;pseudo=true;start_range=.,848965 NZ_CP089940.1 Protein Homology CDS 848965 849173 . - 0 ID=cds-LU631_RS04445;Parent=gene-LU631_RS04445;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611678.1;locus_tag=LU631_RS04445;partial=true;product=transposase;pseudo=true;start_range=.,848965;transl_table=11 NZ_CP089940.1 RefSeq gene 849326 850702 . - . ID=gene-LU631_RS04450;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=LU631_RS04450;old_locus_tag=LU631_04450 NZ_CP089940.1 Protein Homology CDS 849326 850702 . - 0 ID=cds-WP_020322730.1;Parent=gene-LU631_RS04450;Dbxref=Genbank:WP_020322730.1;Name=WP_020322730.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=LU631_RS04450;product=Trk system potassium transporter TrkA;protein_id=WP_020322730.1;transl_table=11 NZ_CP089940.1 RefSeq gene 850749 852038 . - . ID=gene-LU631_RS04455;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=LU631_RS04455;old_locus_tag=LU631_04455 NZ_CP089940.1 Protein Homology CDS 850749 852038 . - 0 ID=cds-WP_020322729.1;Parent=gene-LU631_RS04455;Dbxref=Genbank:WP_020322729.1;Name=WP_020322729.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442824.1;locus_tag=LU631_RS04455;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_020322729.1;transl_table=11 NZ_CP089940.1 RefSeq gene 852086 853027 . - . ID=gene-LU631_RS04460;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=LU631_RS04460;old_locus_tag=LU631_04460 NZ_CP089940.1 Protein Homology CDS 852086 853027 . - 0 ID=cds-WP_020322728.1;Parent=gene-LU631_RS04460;Dbxref=Genbank:WP_020322728.1;Name=WP_020322728.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010615709.1;locus_tag=LU631_RS04460;product=methionyl-tRNA formyltransferase;protein_id=WP_020322728.1;transl_table=11 NZ_CP089940.1 RefSeq gene 853049 853561 . - . ID=gene-LU631_RS04465;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=LU631_RS04465;old_locus_tag=LU631_04465 NZ_CP089940.1 Protein Homology CDS 853049 853561 . - 0 ID=cds-WP_020322727.1;Parent=gene-LU631_RS04465;Dbxref=Genbank:WP_020322727.1;Name=WP_020322727.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204109.1;locus_tag=LU631_RS04465;product=peptide deformylase;protein_id=WP_020322727.1;transl_table=11 NZ_CP089940.1 RefSeq gene 853678 854802 . + . ID=gene-LU631_RS04470;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=LU631_RS04470;old_locus_tag=LU631_04470 NZ_CP089940.1 Protein Homology CDS 853678 854802 . + 0 ID=cds-WP_020322726.1;Parent=gene-LU631_RS04470;Dbxref=Genbank:WP_020322726.1;Name=WP_020322726.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171118.1;locus_tag=LU631_RS04470;product=DNA-protecting protein DprA;protein_id=WP_020322726.1;transl_table=11 NZ_CP089940.1 RefSeq gene 854774 855247 . + . ID=gene-LU631_RS04475;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=LU631_RS04475;old_locus_tag=LU631_04475 NZ_CP089940.1 Protein Homology CDS 854774 855247 . + 0 ID=cds-WP_020322724.1;Parent=gene-LU631_RS04475;Dbxref=Genbank:WP_020322724.1;Name=WP_020322724.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=LU631_RS04475;product=DUF494 family protein Smg;protein_id=WP_020322724.1;transl_table=11 NZ_CP089940.1 RefSeq gene 855275 855829 . + . ID=gene-LU631_RS04480;Name=LU631_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04480;old_locus_tag=LU631_04480 NZ_CP089940.1 Protein Homology CDS 855275 855829 . + 0 ID=cds-WP_020322722.1;Parent=gene-LU631_RS04480;Dbxref=Genbank:WP_020322722.1;Name=WP_020322722.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807061.1;locus_tag=LU631_RS04480;product=type I DNA topoisomerase;protein_id=WP_020322722.1;transl_table=11 NZ_CP089940.1 RefSeq gene 855822 856394 . + . ID=gene-LU631_RS04485;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=LU631_RS04485;old_locus_tag=LU631_04485 NZ_CP089940.1 Protein Homology CDS 855822 856394 . + 0 ID=cds-WP_020322721.1;Parent=gene-LU631_RS04485;Dbxref=Genbank:WP_020322721.1;Name=WP_020322721.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803693.1;locus_tag=LU631_RS04485;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_020322721.1;transl_table=11 NZ_CP089940.1 RefSeq gene 856400 857221 . + . ID=gene-LU631_RS04490;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=LU631_RS04490;old_locus_tag=LU631_04490 NZ_CP089940.1 Protein Homology CDS 856400 857221 . + 0 ID=cds-WP_020322720.1;Parent=gene-LU631_RS04490;Dbxref=Genbank:WP_020322720.1;Name=WP_020322720.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456197.1;locus_tag=LU631_RS04490;product=shikimate dehydrogenase;protein_id=WP_020322720.1;transl_table=11 NZ_CP089940.1 RefSeq gene 857218 857469 . + . ID=gene-LU631_RS04495;Name=LU631_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04495;old_locus_tag=LU631_04495 NZ_CP089940.1 Protein Homology CDS 857218 857469 . + 0 ID=cds-WP_020322719.1;Parent=gene-LU631_RS04495;Dbxref=Genbank:WP_020322719.1;Name=WP_020322719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812183.1;locus_tag=LU631_RS04495;product=DUF1488 domain-containing protein;protein_id=WP_020322719.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 857445 857999 . - . ID=gene-LU631_RS04500;Name=LU631_RS04500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04500;old_locus_tag=LU631_04500;pseudo=true NZ_CP089940.1 Protein Homology CDS 857445 857999 . - 0 ID=cds-LU631_RS04500;Parent=gene-LU631_RS04500;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863357.1;locus_tag=LU631_RS04500;product=gamma carbonic anhydrase family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 858508 860049 . + . ID=gene-LU631_RS04505;Name=LU631_RS04505;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU631_RS04505;old_locus_tag=LU631_04505 NZ_CP089940.1 cmsearch rRNA 858508 860049 . + . ID=rna-LU631_RS04505;Parent=gene-LU631_RS04505;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS04505;product=16S ribosomal RNA NZ_CP089940.1 cmsearch exon 858508 860049 . + . ID=exon-LU631_RS04505-1;Parent=rna-LU631_RS04505;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS04505;product=16S ribosomal RNA NZ_CP089940.1 RefSeq gene 860122 860198 . + . ID=gene-LU631_RS04510;Name=LU631_RS04510;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS04510;old_locus_tag=LU631_04510 NZ_CP089940.1 tRNAscan-SE tRNA 860122 860198 . + . ID=rna-LU631_RS04510;Parent=gene-LU631_RS04510;anticodon=(pos:860156..860158);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS04510;product=tRNA-Ile NZ_CP089940.1 tRNAscan-SE exon 860122 860198 . + . ID=exon-LU631_RS04510-1;Parent=rna-LU631_RS04510;anticodon=(pos:860156..860158);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS04510;product=tRNA-Ile NZ_CP089940.1 RefSeq gene 860341 860416 . + . ID=gene-LU631_RS04515;Name=LU631_RS04515;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS04515;old_locus_tag=LU631_04515 NZ_CP089940.1 tRNAscan-SE tRNA 860341 860416 . + . ID=rna-LU631_RS04515;Parent=gene-LU631_RS04515;anticodon=(pos:860374..860376);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS04515;product=tRNA-Ala NZ_CP089940.1 tRNAscan-SE exon 860341 860416 . + . ID=exon-LU631_RS04515-1;Parent=rna-LU631_RS04515;anticodon=(pos:860374..860376);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS04515;product=tRNA-Ala NZ_CP089940.1 RefSeq gene 860615 863517 . + . ID=gene-LU631_RS04520;Name=LU631_RS04520;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU631_RS04520;old_locus_tag=LU631_04520 NZ_CP089940.1 cmsearch rRNA 860615 863517 . + . ID=rna-LU631_RS04520;Parent=gene-LU631_RS04520;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS04520;product=23S ribosomal RNA NZ_CP089940.1 cmsearch exon 860615 863517 . + . ID=exon-LU631_RS04520-1;Parent=rna-LU631_RS04520;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS04520;product=23S ribosomal RNA NZ_CP089940.1 RefSeq gene 863721 863836 . + . ID=gene-LU631_RS04525;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LU631_RS04525;old_locus_tag=LU631_04525 NZ_CP089940.1 cmsearch rRNA 863721 863836 . + . ID=rna-LU631_RS04525;Parent=gene-LU631_RS04525;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS04525;product=5S ribosomal RNA NZ_CP089940.1 cmsearch exon 863721 863836 . + . ID=exon-LU631_RS04525-1;Parent=rna-LU631_RS04525;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS04525;product=5S ribosomal RNA NZ_CP089940.1 RefSeq pseudogene 864027 864604 . - . ID=gene-LU631_RS04530;Name=LU631_RS04530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04530;old_locus_tag=LU631_04530;partial=true;pseudo=true;start_range=.,864027 NZ_CP089940.1 Protein Homology CDS 864027 864604 . - 0 ID=cds-LU631_RS04530;Parent=gene-LU631_RS04530;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_065945178.1;locus_tag=LU631_RS04530;partial=true;product=transposase family protein;pseudo=true;start_range=.,864027;transl_table=11 NZ_CP089940.1 RefSeq gene 865003 865728 . - . ID=gene-LU631_RS04535;Name=LU631_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04535;old_locus_tag=LU631_04535 NZ_CP089940.1 Protein Homology CDS 865003 865728 . - 0 ID=cds-WP_198292520.1;Parent=gene-LU631_RS04535;Dbxref=Genbank:WP_198292520.1;Name=WP_198292520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631384.1;locus_tag=LU631_RS04535;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_198292520.1;transl_table=11 NZ_CP089940.1 RefSeq gene 865776 866876 . - . ID=gene-LU631_RS04540;Name=LU631_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04540;old_locus_tag=LU631_04540 NZ_CP089940.1 Protein Homology CDS 865776 866876 . - 0 ID=cds-WP_020322715.1;Parent=gene-LU631_RS04540;Dbxref=Genbank:WP_020322715.1;Name=WP_020322715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359220.1;locus_tag=LU631_RS04540;product=amino acid ABC transporter permease;protein_id=WP_020322715.1;transl_table=11 NZ_CP089940.1 RefSeq gene 866893 868071 . - . ID=gene-LU631_RS04545;Name=LU631_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04545;old_locus_tag=LU631_04545 NZ_CP089940.1 Protein Homology CDS 866893 868071 . - 0 ID=cds-WP_020322714.1;Parent=gene-LU631_RS04545;Dbxref=Genbank:WP_020322714.1;Name=WP_020322714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312169.2;locus_tag=LU631_RS04545;product=amino acid ABC transporter permease;protein_id=WP_020322714.1;transl_table=11 NZ_CP089940.1 RefSeq gene 868144 869169 . - . ID=gene-LU631_RS04550;Name=LU631_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04550;old_locus_tag=LU631_04550 NZ_CP089940.1 Protein Homology CDS 868144 869169 . - 0 ID=cds-WP_020322712.1;Parent=gene-LU631_RS04550;Dbxref=Genbank:WP_020322712.1;Name=WP_020322712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121390.1;locus_tag=LU631_RS04550;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_020322712.1;transl_table=11 NZ_CP089940.1 RefSeq gene 869509 870429 . - . ID=gene-LU631_RS04555;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=LU631_RS04555;old_locus_tag=LU631_04555 NZ_CP089940.1 Protein Homology CDS 869509 870429 . - 0 ID=cds-WP_020322710.1;Parent=gene-LU631_RS04555;Dbxref=Genbank:WP_020322710.1;Name=WP_020322710.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000183364.1;locus_tag=LU631_RS04555;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_020322710.1;transl_table=11 NZ_CP089940.1 RefSeq gene 871327 871725 . + . ID=gene-LU631_RS04560;Name=LU631_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04560;old_locus_tag=LU631_04560 NZ_CP089940.1 GeneMarkS-2+ CDS 871327 871725 . + 0 ID=cds-WP_052734730.1;Parent=gene-LU631_RS04560;Dbxref=Genbank:WP_052734730.1;Name=WP_052734730.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS04560;product=hypothetical protein;protein_id=WP_052734730.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 871626 871868 . + . ID=gene-LU631_RS04565;Name=LU631_RS04565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04565;old_locus_tag=LU631_04565;partial=true;pseudo=true;start_range=.,871626 NZ_CP089940.1 Protein Homology CDS 871626 871868 . + 0 ID=cds-LU631_RS04565;Parent=gene-LU631_RS04565;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078279.1;locus_tag=LU631_RS04565;partial=true;product=hypothetical protein;pseudo=true;start_range=.,871626;transl_table=11 NZ_CP089940.1 RefSeq gene 871862 872188 . + . ID=gene-LU631_RS04570;Name=LU631_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04570;old_locus_tag=LU631_04570 NZ_CP089940.1 Protein Homology CDS 871862 872188 . + 0 ID=cds-WP_020322708.1;Parent=gene-LU631_RS04570;Dbxref=Genbank:WP_020322708.1;Name=WP_020322708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007763609.1;locus_tag=LU631_RS04570;product=DUF1493 family protein;protein_id=WP_020322708.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 872465 872611 . + . ID=gene-LU631_RS04575;Name=LU631_RS04575;end_range=872611,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04575;old_locus_tag=LU631_04575;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 872465 872611 . + 0 ID=cds-LU631_RS04575;Parent=gene-LU631_RS04575;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=872611,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077814.1;locus_tag=LU631_RS04575;partial=true;product=phage major capsid protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 872609 872902 . - . ID=gene-LU631_RS04580;Name=LU631_RS04580;end_range=872902,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04580;old_locus_tag=LU631_04580;partial=true;pseudo=true;start_range=.,872609 NZ_CP089940.1 Protein Homology CDS 872609 872902 . - 0 ID=cds-LU631_RS04580;Parent=gene-LU631_RS04580;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=872902,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004150955.1;locus_tag=LU631_RS04580;partial=true;product=terminase large subunit;pseudo=true;start_range=.,872609;transl_table=11 NZ_CP089940.1 RefSeq gene 873396 873599 . + . ID=gene-LU631_RS04585;Name=LU631_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04585;old_locus_tag=LU631_04585 NZ_CP089940.1 Protein Homology CDS 873396 873599 . + 0 ID=cds-WP_020322706.1;Parent=gene-LU631_RS04585;Dbxref=Genbank:WP_020322706.1;Name=WP_020322706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014701555.1;locus_tag=LU631_RS04585;product=DUF2065 domain-containing protein;protein_id=WP_020322706.1;transl_table=11 NZ_CP089940.1 RefSeq gene 873725 875023 . + . ID=gene-LU631_RS04590;Name=LU631_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04590;old_locus_tag=LU631_04590 NZ_CP089940.1 Protein Homology CDS 873725 875023 . + 0 ID=cds-WP_020322705.1;Parent=gene-LU631_RS04590;Dbxref=Genbank:WP_020322705.1;Name=WP_020322705.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=LU631_RS04590;product=adenylosuccinate synthase;protein_id=WP_020322705.1;transl_table=11 NZ_CP089940.1 RefSeq gene 875555 878011 . + . ID=gene-LU631_RS04595;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=LU631_RS04595;old_locus_tag=LU631_04595 NZ_CP089940.1 Protein Homology CDS 875555 878011 . + 0 ID=cds-WP_020322704.1;Parent=gene-LU631_RS04595;Dbxref=Genbank:WP_020322704.1;Name=WP_020322704.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=ribonuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160121.1;locus_tag=LU631_RS04595;product=ribonuclease R;protein_id=WP_020322704.1;transl_table=11 NZ_CP089940.1 RefSeq gene 878027 878761 . + . ID=gene-LU631_RS04600;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=LU631_RS04600;old_locus_tag=LU631_04600 NZ_CP089940.1 Protein Homology CDS 878027 878761 . + 0 ID=cds-WP_020322703.1;Parent=gene-LU631_RS04600;Dbxref=Genbank:WP_020322703.1;Name=WP_020322703.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359175.1;locus_tag=LU631_RS04600;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_020322703.1;transl_table=11 NZ_CP089940.1 RefSeq gene 878884 879924 . + . ID=gene-LU631_RS04605;Name=LU631_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04605;old_locus_tag=LU631_04605 NZ_CP089940.1 Protein Homology CDS 878884 879924 . + 0 ID=cds-WP_046371791.1-3;Parent=gene-LU631_RS04605;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS04605;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq gene 879975 880172 . - . ID=gene-LU631_RS04610;Name=LU631_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04610;old_locus_tag=LU631_04610 NZ_CP089940.1 GeneMarkS-2+ CDS 879975 880172 . - 0 ID=cds-WP_046372185.1;Parent=gene-LU631_RS04610;Dbxref=Genbank:WP_046372185.1;Name=WP_046372185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS04610;product=DUF1471 domain-containing protein;protein_id=WP_046372185.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 880178 880744 . - . ID=gene-LU631_RS04615;Name=LU631_RS04615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04615;old_locus_tag=LU631_04615;pseudo=true NZ_CP089940.1 Protein Homology CDS 880178 880744 . - 0 ID=cds-LU631_RS04615;Parent=gene-LU631_RS04615;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028510.2;locus_tag=LU631_RS04615;product=Cache 3/Cache 2 fusion domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 880813 882136 . - . ID=gene-LU631_RS04620;Name=LU631_RS04620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04620;old_locus_tag=LU631_04620;pseudo=true NZ_CP089940.1 Protein Homology CDS 880813 882136 . - 0 ID=cds-LU631_RS04620;Parent=gene-LU631_RS04620;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS04620;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 882696 883445 . + . ID=gene-LU631_RS04625;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=LU631_RS04625;old_locus_tag=LU631_04625 NZ_CP089940.1 Protein Homology CDS 882696 883445 . + 0 ID=cds-WP_020322696.1;Parent=gene-LU631_RS04625;Dbxref=Genbank:WP_020322696.1;Name=WP_020322696.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120929.1;locus_tag=LU631_RS04625;product=esterase;protein_id=WP_020322696.1;transl_table=11 NZ_CP089940.1 RefSeq gene 883667 884059 . + . ID=gene-LU631_RS04630;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=LU631_RS04630;old_locus_tag=LU631_04630 NZ_CP089940.1 Protein Homology CDS 883667 884059 . + 0 ID=cds-WP_020322695.1;Parent=gene-LU631_RS04630;Dbxref=Genbank:WP_020322695.1;Name=WP_020322695.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=LU631_RS04630;product=30S ribosomal protein S6;protein_id=WP_020322695.1;transl_table=11 NZ_CP089940.1 RefSeq gene 884066 884383 . + . ID=gene-LU631_RS04635;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=LU631_RS04635;old_locus_tag=LU631_04635 NZ_CP089940.1 Protein Homology CDS 884066 884383 . + 0 ID=cds-WP_020322694.1;Parent=gene-LU631_RS04635;Dbxref=Genbank:WP_020322694.1;Name=WP_020322694.1;Ontology_term=GO:0006269,GO:0003697;gbkey=CDS;gene=priB;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666877.1;locus_tag=LU631_RS04635;product=primosomal replication protein N;protein_id=WP_020322694.1;transl_table=11 NZ_CP089940.1 RefSeq gene 884388 884615 . + . ID=gene-LU631_RS04640;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=LU631_RS04640;old_locus_tag=LU631_04640 NZ_CP089940.1 Protein Homology CDS 884388 884615 . + 0 ID=cds-WP_000135199.1;Parent=gene-LU631_RS04640;Dbxref=Genbank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=LU631_RS04640;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_CP089940.1 RefSeq gene 884653 885105 . + . ID=gene-LU631_RS04645;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=LU631_RS04645;old_locus_tag=LU631_04645 NZ_CP089940.1 Protein Homology CDS 884653 885105 . + 0 ID=cds-WP_016190652.1;Parent=gene-LU631_RS04645;Dbxref=Genbank:WP_016190652.1;Name=WP_016190652.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148644.1;locus_tag=LU631_RS04645;product=50S ribosomal protein L9;protein_id=WP_016190652.1;transl_table=11 NZ_CP089940.1 RefSeq gene 885116 885646 . - . ID=gene-LU631_RS04650;Name=LU631_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04650;old_locus_tag=LU631_04650 NZ_CP089940.1 Protein Homology CDS 885116 885646 . - 0 ID=cds-WP_016190651.1;Parent=gene-LU631_RS04650;Dbxref=Genbank:WP_016190651.1;Name=WP_016190651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200503.1;locus_tag=LU631_RS04650;product=opacity-associated protein OapA;protein_id=WP_016190651.1;transl_table=11 NZ_CP089940.1 RefSeq gene 885947 886567 . + . ID=gene-LU631_RS04655;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=LU631_RS04655;old_locus_tag=LU631_04655 NZ_CP089940.1 Protein Homology CDS 885947 886567 . + 0 ID=cds-WP_016190650.1;Parent=gene-LU631_RS04655;Dbxref=Genbank:WP_016190650.1;Name=WP_016190650.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=LU631_RS04655;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_016190650.1;transl_table=11 NZ_CP089940.1 RefSeq gene 886842 887120 . + . ID=gene-LU631_RS04660;Name=LU631_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04660;old_locus_tag=LU631_04660 NZ_CP089940.1 GeneMarkS-2+ CDS 886842 887120 . + 0 ID=cds-WP_016190649.1;Parent=gene-LU631_RS04660;Dbxref=Genbank:WP_016190649.1;Name=WP_016190649.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS04660;product=hypothetical protein;protein_id=WP_016190649.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 888034 888844 . + . ID=gene-LU631_RS04665;Name=LU631_RS04665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04665;old_locus_tag=LU631_04665;pseudo=true NZ_CP089940.1 Protein Homology CDS 888034 888844 . + 0 ID=cds-LU631_RS04665;Parent=gene-LU631_RS04665;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS04665;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 888989 889342 . - . ID=gene-LU631_RS04670;Name=LU631_RS04670;end_range=889342,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04670;old_locus_tag=LU631_04670;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 888989 889342 . - 0 ID=cds-LU631_RS04670;Parent=gene-LU631_RS04670;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=889342,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612091.1;locus_tag=LU631_RS04670;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 889448 890145 . + . ID=gene-LU631_RS04675;Name=LU631_RS04675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04675;old_locus_tag=LU631_04675;pseudo=true NZ_CP089940.1 Protein Homology CDS 889448 890145 . + 0 ID=cds-LU631_RS04675;Parent=gene-LU631_RS04675;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS04675;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 890343 890594 . - . ID=gene-LU631_RS04680;Name=LU631_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04680;old_locus_tag=LU631_04680 NZ_CP089940.1 GeneMarkS-2+ CDS 890343 890594 . - 0 ID=cds-WP_016190644.1;Parent=gene-LU631_RS04680;Dbxref=Genbank:WP_016190644.1;Name=WP_016190644.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS04680;product=hypothetical protein;protein_id=WP_016190644.1;transl_table=11 NZ_CP089940.1 RefSeq gene 890548 892851 . + . ID=gene-LU631_RS04685;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=LU631_RS04685;old_locus_tag=LU631_04685 NZ_CP089940.1 Protein Homology CDS 890548 892851 . + 0 ID=cds-WP_040465448.1;Parent=gene-LU631_RS04685;Dbxref=Genbank:WP_040465448.1;Name=WP_040465448.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666786.1;locus_tag=LU631_RS04685;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_040465448.1;transl_table=11 NZ_CP089940.1 RefSeq gene 893132 894685 . + . ID=gene-LU631_RS04690;Name=LU631_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04690;old_locus_tag=LU631_04690 NZ_CP089940.1 Protein Homology CDS 893132 894685 . + 0 ID=cds-WP_016190642.1;Parent=gene-LU631_RS04690;Dbxref=Genbank:WP_016190642.1;Name=WP_016190642.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203908.1;locus_tag=LU631_RS04690;product=methyl-accepting chemotaxis protein;protein_id=WP_016190642.1;transl_table=11 NZ_CP089940.1 RefSeq gene 895005 896198 . + . ID=gene-LU631_RS04695;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=LU631_RS04695;old_locus_tag=LU631_04695 NZ_CP089940.1 Protein Homology CDS 895005 896198 . + 0 ID=cds-WP_016190641.1;Parent=gene-LU631_RS04695;Dbxref=Genbank:WP_016190641.1;Name=WP_016190641.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203909.1;locus_tag=LU631_RS04695;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_016190641.1;transl_table=11 NZ_CP089940.1 RefSeq gene 896195 896320 . - . ID=gene-LU631_RS26010;Name=LU631_RS26010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26010 NZ_CP089940.1 GeneMarkS-2+ CDS 896195 896320 . - 0 ID=cds-WP_016190640.1;Parent=gene-LU631_RS26010;Dbxref=Genbank:WP_016190640.1;Name=WP_016190640.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS26010;product=hypothetical protein;protein_id=WP_016190640.1;transl_table=11 NZ_CP089940.1 RefSeq gene 896802 897449 . + . ID=gene-LU631_RS04700;Name=LU631_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04700;old_locus_tag=LU631_04700 NZ_CP089940.1 Protein Homology CDS 896802 897449 . + 0 ID=cds-WP_016190639.1;Parent=gene-LU631_RS04700;Dbxref=Genbank:WP_016190639.1;Name=WP_016190639.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028064.2;locus_tag=LU631_RS04700;product=pesticin C-terminus-like muramidase;protein_id=WP_016190639.1;transl_table=11 NZ_CP089940.1 RefSeq gene 897436 897789 . + . ID=gene-LU631_RS04705;Name=LU631_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04705;old_locus_tag=LU631_04705 NZ_CP089940.1 GeneMarkS-2+ CDS 897436 897789 . + 0 ID=cds-WP_016190638.1;Parent=gene-LU631_RS04705;Dbxref=Genbank:WP_016190638.1;Name=WP_016190638.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS04705;product=hypothetical protein;protein_id=WP_016190638.1;transl_table=11 NZ_CP089940.1 RefSeq gene 897882 898579 . + . ID=gene-LU631_RS04710;Name=LU631_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04710;old_locus_tag=LU631_04710 NZ_CP089940.1 Protein Homology CDS 897882 898131 . + 0 ID=cds-WP_233481989.1;Parent=gene-LU631_RS04710;Dbxref=Genbank:WP_233481989.1;Name=WP_233481989.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS04710;product=IS1 family transposase;protein_id=WP_233481989.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 898131 898579 . + 2 ID=cds-WP_233481989.1;Parent=gene-LU631_RS04710;Dbxref=Genbank:WP_233481989.1;Name=WP_233481989.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS04710;product=IS1 family transposase;protein_id=WP_233481989.1;transl_table=11 NZ_CP089940.1 RefSeq gene 898817 899968 . + . ID=gene-LU631_RS04715;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=LU631_RS04715;old_locus_tag=LU631_04715 NZ_CP089940.1 Protein Homology CDS 898817 899968 . + 0 ID=cds-WP_016190637.1;Parent=gene-LU631_RS04715;Dbxref=Genbank:WP_016190637.1;Name=WP_016190637.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104888.1;locus_tag=LU631_RS04715;product=lactaldehyde reductase;protein_id=WP_016190637.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 900470 900894 . + . ID=gene-LU631_RS04720;Name=LU631_RS04720;end_range=900894,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04720;old_locus_tag=LU631_04720;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 900470 900894 . + 0 ID=cds-LU631_RS04720;Parent=gene-LU631_RS04720;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=900894,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS04720;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 901045 901242 . - . ID=gene-LU631_RS04725;Name=LU631_RS04725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04725;old_locus_tag=LU631_04725;partial=true;pseudo=true;start_range=.,901045 NZ_CP089940.1 Protein Homology CDS 901045 901242 . - 0 ID=cds-LU631_RS04725;Parent=gene-LU631_RS04725;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=LU631_RS04725;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,901045;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 901468 902070 . + . ID=gene-LU631_RS04730;Name=LU631_RS04730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04730;old_locus_tag=LU631_04730;pseudo=true NZ_CP089940.1 Protein Homology CDS 901468 902070 . + 0 ID=cds-LU631_RS04730;Parent=gene-LU631_RS04730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593759.1;locus_tag=LU631_RS04730;product=acyl-homoserine-lactone synthase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 902164 902337 . + . ID=gene-LU631_RS04735;Name=LU631_RS04735;end_range=902337,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04735;old_locus_tag=LU631_04735;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 902164 902337 . + 0 ID=cds-LU631_RS04735;Parent=gene-LU631_RS04735;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=902337,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=LU631_RS04735;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 902408 903571 . + . ID=gene-LU631_RS04740;Name=LU631_RS04740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04740;old_locus_tag=LU631_04740;pseudo=true NZ_CP089940.1 Protein Homology CDS 902408 903571 . + 0 ID=cds-LU631_RS04740;Parent=gene-LU631_RS04740;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612263.1;locus_tag=LU631_RS04740;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 903587 903916 . + . ID=gene-LU631_RS04745;Name=LU631_RS04745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04745;old_locus_tag=LU631_04745;partial=true;pseudo=true;start_range=.,903587 NZ_CP089940.1 Protein Homology CDS 903587 903916 . + 0 ID=cds-LU631_RS04745;Parent=gene-LU631_RS04745;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487120.1;locus_tag=LU631_RS04745;partial=true;product=transposase;pseudo=true;start_range=.,903587;transl_table=11 NZ_CP089940.1 RefSeq gene 905152 905463 . - . ID=gene-LU631_RS04750;Name=LU631_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04750;old_locus_tag=LU631_04750 NZ_CP089940.1 GeneMarkS-2+ CDS 905152 905463 . - 0 ID=cds-WP_016190632.1;Parent=gene-LU631_RS04750;Dbxref=Genbank:WP_016190632.1;Name=WP_016190632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS04750;product=hypothetical protein;protein_id=WP_016190632.1;transl_table=11 NZ_CP089940.1 RefSeq gene 905491 905748 . - . ID=gene-LU631_RS04755;Name=LU631_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04755;old_locus_tag=LU631_04755 NZ_CP089940.1 GeneMarkS-2+ CDS 905491 905748 . - 0 ID=cds-WP_016190631.1;Parent=gene-LU631_RS04755;Dbxref=Genbank:WP_016190631.1;Name=WP_016190631.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS04755;product=hypothetical protein;protein_id=WP_016190631.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 905934 906277 . + . ID=gene-LU631_RS04760;Name=traN;end_range=906277,.;gbkey=Gene;gene=traN;gene_biotype=pseudogene;locus_tag=LU631_RS04760;old_locus_tag=LU631_04760;partial=true;pseudo=true;start_range=.,905934 NZ_CP089940.1 Protein Homology CDS 905934 906277 . + 0 ID=cds-LU631_RS04760;Parent=gene-LU631_RS04760;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=906277,.;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000833260.1;locus_tag=LU631_RS04760;partial=true;product=conjugal transfer protein TraN;pseudo=true;start_range=.,905934;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 906551 907039 . + . ID=gene-LU631_RS04765;Name=traF;gbkey=Gene;gene=traF;gene_biotype=pseudogene;locus_tag=LU631_RS04765;old_locus_tag=LU631_04765;pseudo=true NZ_CP089940.1 Protein Homology CDS 906551 907039 . + 0 ID=cds-LU631_RS04765;Parent=gene-LU631_RS04765;Note=internal stop;gbkey=CDS;gene=traF;inference=COORDINATES: protein motif:HMM:NF025105.2;locus_tag=LU631_RS04765;product=conjugal transfer protein TraF;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 907092 907373 . - . ID=gene-LU631_RS04770;Name=LU631_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04770;old_locus_tag=LU631_04770 NZ_CP089940.1 Protein Homology CDS 907092 907373 . - 0 ID=cds-WP_016190628.1;Parent=gene-LU631_RS04770;Dbxref=Genbank:WP_016190628.1;Name=WP_016190628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001694627.1;locus_tag=LU631_RS04770;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_016190628.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 907418 907788 . - . ID=gene-LU631_RS04775;Name=LU631_RS04775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04775;old_locus_tag=LU631_04775;partial=true;pseudo=true;start_range=.,907418 NZ_CP089940.1 Protein Homology CDS 907418 907788 . - 0 ID=cds-LU631_RS04775;Parent=gene-LU631_RS04775;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=LU631_RS04775;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;start_range=.,907418;transl_table=11 NZ_CP089940.1 RefSeq gene 907925 908449 . - . ID=gene-LU631_RS04780;Name=LU631_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04780;old_locus_tag=LU631_04780 NZ_CP089940.1 Protein Homology CDS 907925 908449 . - 0 ID=cds-WP_016190625.1;Parent=gene-LU631_RS04780;Dbxref=Genbank:WP_016190625.1;Name=WP_016190625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012988025.1;locus_tag=LU631_RS04780;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_016190625.1;transl_table=11 NZ_CP089940.1 RefSeq gene 908451 908684 . - . ID=gene-LU631_RS04785;Name=LU631_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04785;old_locus_tag=LU631_04785 NZ_CP089940.1 GeneMarkS-2+ CDS 908451 908684 . - 0 ID=cds-WP_232426833.1;Parent=gene-LU631_RS04785;Dbxref=Genbank:WP_232426833.1;Name=WP_232426833.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS04785;product=hypothetical protein;protein_id=WP_232426833.1;transl_table=11 NZ_CP089940.1 RefSeq gene 908807 909475 . - . ID=gene-LU631_RS04790;Name=LU631_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04790;old_locus_tag=LU631_04790 NZ_CP089940.1 Protein Homology CDS 908807 909475 . - 0 ID=cds-WP_071598880.1;Parent=gene-LU631_RS04790;Dbxref=Genbank:WP_071598880.1;Name=WP_071598880.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016242.2;locus_tag=LU631_RS04790;product=peptidogalycan biosysnthesis protein;protein_id=WP_071598880.1;transl_table=11 NZ_CP089940.1 RefSeq gene 910464 914495 . - . ID=gene-LU631_RS04795;Name=LU631_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04795;old_locus_tag=LU631_04795 NZ_CP089940.1 GeneMarkS-2+ CDS 910464 914495 . - 0 ID=cds-WP_152664249.1;Parent=gene-LU631_RS04795;Dbxref=Genbank:WP_152664249.1;Name=WP_152664249.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS04795;product=hypothetical protein;protein_id=WP_152664249.1;transl_table=11 NZ_CP089940.1 RefSeq gene 914434 915507 . - . ID=gene-LU631_RS04800;Name=LU631_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04800;old_locus_tag=LU631_04800 NZ_CP089940.1 GeneMarkS-2+ CDS 914434 915507 . - 0 ID=cds-WP_051124343.1;Parent=gene-LU631_RS04800;Dbxref=Genbank:WP_051124343.1;Name=WP_051124343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS04800;product=hypothetical protein;protein_id=WP_051124343.1;transl_table=11 NZ_CP089940.1 RefSeq gene 916759 916944 . - . ID=gene-LU631_RS04805;Name=LU631_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04805;old_locus_tag=LU631_04805 NZ_CP089940.1 Protein Homology CDS 916759 916944 . - 0 ID=cds-WP_071598879.1;Parent=gene-LU631_RS04805;Dbxref=Genbank:WP_071598879.1;Name=WP_071598879.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS04805;product=transposase;protein_id=WP_071598879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 916995 917393 . - . ID=gene-LU631_RS04810;Name=LU631_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04810;old_locus_tag=LU631_04810 NZ_CP089940.1 Protein Homology CDS 916995 917393 . - 0 ID=cds-WP_071598878.1;Parent=gene-LU631_RS04810;Dbxref=Genbank:WP_071598878.1;Name=WP_071598878.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS04810;product=transposase;protein_id=WP_071598878.1;transl_table=11 NZ_CP089940.1 RefSeq gene 917595 917870 . + . ID=gene-LU631_RS04815;Name=LU631_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04815;old_locus_tag=LU631_04815 NZ_CP089940.1 Protein Homology CDS 917595 917870 . + 0 ID=cds-WP_016190621.1;Parent=gene-LU631_RS04815;Dbxref=Genbank:WP_016190621.1;Name=WP_016190621.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019023.2;locus_tag=LU631_RS04815;product=DUF1493 family protein;protein_id=WP_016190621.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 918107 918438 . + . ID=gene-LU631_RS04820;Name=LU631_RS04820;end_range=918438,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04820;old_locus_tag=LU631_04820;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 918107 918438 . + 0 ID=cds-LU631_RS04820;Parent=gene-LU631_RS04820;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=918438,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077814.1;locus_tag=LU631_RS04820;partial=true;product=terminase large subunit;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 918775 919161 . - . ID=gene-LU631_RS04825;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS04825;old_locus_tag=LU631_04825;pseudo=true NZ_CP089940.1 Protein Homology CDS 918775 919161 . - 0 ID=cds-LU631_RS04825;Parent=gene-LU631_RS04825;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS04825;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 919391 919687 . - . ID=gene-LU631_RS04830;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=LU631_RS04830;old_locus_tag=LU631_04830 NZ_CP089940.1 Protein Homology CDS 919391 919687 . - 0 ID=cds-WP_016190619.1;Parent=gene-LU631_RS04830;Dbxref=Genbank:WP_016190619.1;Name=WP_016190619.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=LU631_RS04830;product=DNA-binding transcriptional regulator Fis;protein_id=WP_016190619.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 919669 920677 . - . ID=gene-LU631_RS04835;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=pseudogene;locus_tag=LU631_RS04835;old_locus_tag=LU631_04835;pseudo=true NZ_CP089940.1 Protein Homology CDS 919669 920677 . - 0 ID=cds-LU631_RS04835;Parent=gene-LU631_RS04835;Note=frameshifted;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936856.1;locus_tag=LU631_RS04835;product=tRNA dihydrouridine synthase DusB;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 920993 921727 . - . ID=gene-LU631_RS04840;Name=LU631_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04840;old_locus_tag=LU631_04840 NZ_CP089940.1 Protein Homology CDS 920993 921727 . - 0 ID=cds-WP_016190617.1;Parent=gene-LU631_RS04840;Dbxref=Genbank:WP_016190617.1;Name=WP_016190617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010260554.1;locus_tag=LU631_RS04840;product=carbonic anhydrase family protein;protein_id=WP_016190617.1;transl_table=11 NZ_CP089940.1 RefSeq gene 921864 922745 . - . ID=gene-LU631_RS04845;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=LU631_RS04845;old_locus_tag=LU631_04845 NZ_CP089940.1 Protein Homology CDS 921864 922745 . - 0 ID=cds-WP_016190616.1;Parent=gene-LU631_RS04845;Dbxref=Genbank:WP_016190616.1;Name=WP_016190616.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001145856.1;locus_tag=LU631_RS04845;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_016190616.1;transl_table=11 NZ_CP089940.1 RefSeq gene 922757 924208 . - . ID=gene-LU631_RS04850;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=LU631_RS04850;old_locus_tag=LU631_04850 NZ_CP089940.1 Protein Homology CDS 922757 924208 . - 0 ID=cds-WP_016190615.1;Parent=gene-LU631_RS04850;Dbxref=Genbank:WP_016190615.1;Name=WP_016190615.1;Ontology_term=GO:0015887,GO:0015937,GO:0015498;gbkey=CDS;gene=panF;go_function=pantothenate:sodium symporter activity|0015498||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585636.1;locus_tag=LU631_RS04850;product=sodium/pantothenate symporter;protein_id=WP_016190615.1;transl_table=11 NZ_CP089940.1 RefSeq gene 924205 924441 . - . ID=gene-LU631_RS04855;Name=LU631_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04855;old_locus_tag=LU631_04855 NZ_CP089940.1 Protein Homology CDS 924205 924441 . - 0 ID=cds-WP_016190614.1;Parent=gene-LU631_RS04855;Dbxref=Genbank:WP_016190614.1;Name=WP_016190614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204093.1;locus_tag=LU631_RS04855;product=YhdT family protein;protein_id=WP_016190614.1;transl_table=11 NZ_CP089940.1 RefSeq gene 924511 925860 . - . ID=gene-LU631_RS04860;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=LU631_RS04860;old_locus_tag=LU631_04860 NZ_CP089940.1 Protein Homology CDS 924511 925860 . - 0 ID=cds-WP_016190613.1;Parent=gene-LU631_RS04860;Dbxref=Genbank:WP_016190613.1;Name=WP_016190613.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817284.1;locus_tag=LU631_RS04860;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_016190613.1;transl_table=11 NZ_CP089940.1 RefSeq gene 925872 926345 . - . ID=gene-LU631_RS04865;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=LU631_RS04865;old_locus_tag=LU631_04865 NZ_CP089940.1 Protein Homology CDS 925872 926345 . - 0 ID=cds-WP_016190612.1;Parent=gene-LU631_RS04865;Dbxref=Genbank:WP_016190612.1;Name=WP_016190612.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=LU631_RS04865;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_016190612.1;transl_table=11 NZ_CP089940.1 RefSeq gene 926367 926819 . - . ID=gene-LU631_RS04870;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=LU631_RS04870;old_locus_tag=LU631_04870 NZ_CP089940.1 Protein Homology CDS 926367 926819 . - 0 ID=cds-WP_016190611.1;Parent=gene-LU631_RS04870;Dbxref=Genbank:WP_016190611.1;Name=WP_016190611.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009087521.1;locus_tag=LU631_RS04870;product=type II 3-dehydroquinate dehydratase;protein_id=WP_016190611.1;transl_table=11 NZ_CP089940.1 RefSeq gene 927057 927659 . - . ID=gene-LU631_RS04875;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=LU631_RS04875;old_locus_tag=LU631_04875 NZ_CP089940.1 Protein Homology CDS 927057 927659 . - 0 ID=cds-WP_016190610.1;Parent=gene-LU631_RS04875;Dbxref=Genbank:WP_016190610.1;Name=WP_016190610.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009634912.1;locus_tag=LU631_RS04875;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_016190610.1;transl_table=11 NZ_CP089940.1 RefSeq gene 927659 928660 . - . ID=gene-LU631_RS04880;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=LU631_RS04880;old_locus_tag=LU631_04880 NZ_CP089940.1 Protein Homology CDS 927659 928660 . - 0 ID=cds-WP_016190609.1;Parent=gene-LU631_RS04880;Dbxref=Genbank:WP_016190609.1;Name=WP_016190609.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013034825.1;locus_tag=LU631_RS04880;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_016190609.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 928798 929772 . - . ID=gene-LU631_RS04885;Name=LU631_RS04885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04885;old_locus_tag=LU631_04885;pseudo=true NZ_CP089940.1 Protein Homology CDS 928798 929772 . - 0 ID=cds-LU631_RS04885;Parent=gene-LU631_RS04885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001679638.1;locus_tag=LU631_RS04885;product=oxidoreductase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 929965 931914 . + . ID=gene-LU631_RS04890;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=LU631_RS04890;old_locus_tag=LU631_04890 NZ_CP089940.1 Protein Homology CDS 929965 931914 . + 0 ID=cds-WP_040465446.1;Parent=gene-LU631_RS04890;Dbxref=Genbank:WP_040465446.1;Name=WP_040465446.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440048.1;locus_tag=LU631_RS04890;product=RNase E specificity factor CsrD;protein_id=WP_040465446.1;transl_table=11 NZ_CP089940.1 RefSeq gene 932239 933282 . + . ID=gene-LU631_RS04895;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=LU631_RS04895;old_locus_tag=LU631_04895 NZ_CP089940.1 Protein Homology CDS 932239 933282 . + 0 ID=cds-WP_016190605.1;Parent=gene-LU631_RS04895;Dbxref=Genbank:WP_016190605.1;Name=WP_016190605.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=LU631_RS04895;product=rod shape-determining protein MreB;protein_id=WP_016190605.1;transl_table=11 NZ_CP089940.1 RefSeq gene 933351 934388 . + . ID=gene-LU631_RS04900;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=LU631_RS04900;old_locus_tag=LU631_04900 NZ_CP089940.1 Protein Homology CDS 933351 934388 . + 0 ID=cds-WP_016190604.1;Parent=gene-LU631_RS04900;Dbxref=Genbank:WP_016190604.1;Name=WP_016190604.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594736.1;locus_tag=LU631_RS04900;product=rod shape-determining protein MreC;protein_id=WP_016190604.1;transl_table=11 NZ_CP089940.1 RefSeq gene 934385 934873 . + . ID=gene-LU631_RS04905;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=LU631_RS04905;old_locus_tag=LU631_04905 NZ_CP089940.1 Protein Homology CDS 934385 934873 . + 0 ID=cds-WP_016190603.1;Parent=gene-LU631_RS04905;Dbxref=Genbank:WP_016190603.1;Name=WP_016190603.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312148.1;locus_tag=LU631_RS04905;product=rod shape-determining protein MreD;protein_id=WP_016190603.1;transl_table=11 NZ_CP089940.1 RefSeq gene 934882 935478 . + . ID=gene-LU631_RS04910;Name=LU631_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04910;old_locus_tag=LU631_04910 NZ_CP089940.1 Protein Homology CDS 934882 935478 . + 0 ID=cds-WP_016190602.1;Parent=gene-LU631_RS04910;Dbxref=Genbank:WP_016190602.1;Name=WP_016190602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009087511.1;locus_tag=LU631_RS04910;product=Maf family protein;protein_id=WP_016190602.1;transl_table=11 NZ_CP089940.1 RefSeq gene 935468 936937 . + . ID=gene-LU631_RS04915;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=LU631_RS04915;old_locus_tag=LU631_04915 NZ_CP089940.1 Protein Homology CDS 935468 936937 . + 0 ID=cds-WP_016190601.1;Parent=gene-LU631_RS04915;Dbxref=Genbank:WP_016190601.1;Name=WP_016190601.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,ribonuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=LU631_RS04915;product=ribonuclease G;protein_id=WP_016190601.1;transl_table=11 NZ_CP089940.1 RefSeq gene 936969 940775 . + . ID=gene-LU631_RS04920;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=LU631_RS04920;old_locus_tag=LU631_04920 NZ_CP089940.1 Protein Homology CDS 936969 940775 . + 0 ID=cds-WP_040465485.1;Parent=gene-LU631_RS04920;Dbxref=Genbank:WP_040465485.1;Name=WP_040465485.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155049.1;locus_tag=LU631_RS04920;product=AsmA2 domain-containing protein YhdP;protein_id=WP_040465485.1;transl_table=11 NZ_CP089940.1 RefSeq gene 940859 942304 . + . ID=gene-LU631_RS04925;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=LU631_RS04925;old_locus_tag=LU631_04925 NZ_CP089940.1 Protein Homology CDS 940859 942304 . + 0 ID=cds-WP_016190599.1;Parent=gene-LU631_RS04925;Dbxref=Genbank:WP_016190599.1;Name=WP_016190599.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=LU631_RS04925;product=metalloprotease TldD;protein_id=WP_016190599.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 942337 943239 . - . ID=gene-LU631_RS04930;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=pseudogene;locus_tag=LU631_RS04930;old_locus_tag=LU631_04930;pseudo=true NZ_CP089940.1 Protein Homology CDS 942337 943239 . - 0 ID=cds-LU631_RS04930;Parent=gene-LU631_RS04930;Note=internal stop;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155051.1;locus_tag=LU631_RS04930;product=HTH-type transcriptional activator AaeR;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 943503 943706 . + . ID=gene-LU631_RS04935;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=LU631_RS04935;old_locus_tag=LU631_04935 NZ_CP089940.1 Protein Homology CDS 943503 943706 . + 0 ID=cds-WP_016190596.1;Parent=gene-LU631_RS04935;Dbxref=Genbank:WP_016190596.1;Name=WP_016190596.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229082.1;locus_tag=LU631_RS04935;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_016190596.1;transl_table=11 NZ_CP089940.1 RefSeq gene 943714 944646 . + . ID=gene-LU631_RS04940;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=LU631_RS04940;old_locus_tag=LU631_04940 NZ_CP089940.1 Protein Homology CDS 943714 944646 . + 0 ID=cds-WP_016190595.1;Parent=gene-LU631_RS04940;Dbxref=Genbank:WP_016190595.1;Name=WP_016190595.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155055.1;locus_tag=LU631_RS04940;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_016190595.1;transl_table=11 NZ_CP089940.1 RefSeq gene 944651 946609 . + . ID=gene-LU631_RS04945;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=LU631_RS04945;old_locus_tag=LU631_04945 NZ_CP089940.1 Protein Homology CDS 944651 946609 . + 0 ID=cds-WP_016190594.1;Parent=gene-LU631_RS04945;Dbxref=Genbank:WP_016190594.1;Name=WP_016190594.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155056.1;locus_tag=LU631_RS04945;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_016190594.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 946743 947096 . + . ID=gene-LU631_RS04950;Name=LU631_RS04950;end_range=947096,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04950;old_locus_tag=LU631_04950;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 946743 947096 . + 0 ID=cds-LU631_RS04950;Parent=gene-LU631_RS04950;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016491;end_range=947096,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359198.1;locus_tag=LU631_RS04950;partial=true;product=aldehyde dehydrogenase family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 947158 947937 . - . ID=gene-LU631_RS04955;Name=LU631_RS04955;end_range=947937,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04955;old_locus_tag=LU631_04955;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 947158 947937 . - 0 ID=cds-LU631_RS04955;Parent=gene-LU631_RS04955;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=947937,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011073373.1;locus_tag=LU631_RS04955;partial=true;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 947991 948143 . + . ID=gene-LU631_RS04960;Name=LU631_RS04960;end_range=948143,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04960;old_locus_tag=LU631_04960;partial=true;pseudo=true;start_range=.,947991 NZ_CP089940.1 Protein Homology CDS 947991 948143 . + 0 ID=cds-LU631_RS04960;Parent=gene-LU631_RS04960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016491;end_range=948143,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000358103.1;locus_tag=LU631_RS04960;partial=true;product=aldehyde dehydrogenase family protein;pseudo=true;start_range=.,947991;transl_table=11 NZ_CP089940.1 RefSeq gene 948181 948450 . + . ID=gene-LU631_RS04965;Name=LU631_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04965;old_locus_tag=LU631_04965 NZ_CP089940.1 Protein Homology CDS 948181 948450 . + 0 ID=cds-WP_016190591.1;Parent=gene-LU631_RS04965;Dbxref=Genbank:WP_016190591.1;Name=WP_016190591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204075.1;locus_tag=LU631_RS04965;product=barnase inhibitor;protein_id=WP_016190591.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 948530 948721 . - . ID=gene-LU631_RS04970;Name=LU631_RS04970;end_range=948721,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS04970;old_locus_tag=LU631_04970;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 948530 948721 . - 0 ID=cds-LU631_RS04970;Parent=gene-LU631_RS04970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=948721,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004928.1;locus_tag=LU631_RS04970;partial=true;product=DUF1471 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 949128 949598 . - . ID=gene-LU631_RS04975;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=LU631_RS04975;old_locus_tag=LU631_04975 NZ_CP089940.1 Protein Homology CDS 949128 949598 . - 0 ID=cds-WP_016190589.1;Parent=gene-LU631_RS04975;Dbxref=Genbank:WP_016190589.1;Name=WP_016190589.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=LU631_RS04975;product=transcriptional regulator ArgR;protein_id=WP_016190589.1;transl_table=11 NZ_CP089940.1 RefSeq gene 950014 950949 . + . ID=gene-LU631_RS04980;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=LU631_RS04980;old_locus_tag=LU631_04980 NZ_CP089940.1 Protein Homology CDS 950014 950949 . + 0 ID=cds-WP_016190588.1;Parent=gene-LU631_RS04980;Dbxref=Genbank:WP_016190588.1;Name=WP_016190588.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004707044.1;locus_tag=LU631_RS04980;product=malate dehydrogenase;protein_id=WP_016190588.1;transl_table=11 NZ_CP089940.1 RefSeq gene 950988 952046 . - . ID=gene-LU631_RS04985;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=LU631_RS04985;old_locus_tag=LU631_04985 NZ_CP089940.1 Protein Homology CDS 950988 952046 . - 0 ID=cds-WP_016190587.1;Parent=gene-LU631_RS04985;Dbxref=Genbank:WP_016190587.1;Name=WP_016190587.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883511.1;locus_tag=LU631_RS04985;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_016190587.1;transl_table=11 NZ_CP089940.1 RefSeq gene 952123 953490 . - . ID=gene-LU631_RS04990;Name=LU631_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS04990;old_locus_tag=LU631_04990 NZ_CP089940.1 Protein Homology CDS 952123 953490 . - 0 ID=cds-WP_016190586.1;Parent=gene-LU631_RS04990;Dbxref=Genbank:WP_016190586.1;Name=WP_016190586.1;Ontology_term=GO:0006508,GO:0006950,GO:0004252,GO:0005515,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011073684.1;locus_tag=LU631_RS04990;product=Do family serine endopeptidase;protein_id=WP_016190586.1;transl_table=11 NZ_CP089940.1 RefSeq gene 953605 954009 . - . ID=gene-LU631_RS04995;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=LU631_RS04995;old_locus_tag=LU631_04995 NZ_CP089940.1 Protein Homology CDS 953605 954009 . - 0 ID=cds-WP_016190585.1;Parent=gene-LU631_RS04995;Dbxref=Genbank:WP_016190585.1;Name=WP_016190585.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848291.1;locus_tag=LU631_RS04995;product=Z-ring associated protein ZapG;protein_id=WP_016190585.1;transl_table=11 NZ_CP089940.1 RefSeq gene 954196 955323 . + . ID=gene-LU631_RS05000;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=LU631_RS05000;old_locus_tag=LU631_05000 NZ_CP089940.1 Protein Homology CDS 954196 955323 . + 0 ID=cds-WP_016190584.1;Parent=gene-LU631_RS05000;Dbxref=Genbank:WP_016190584.1;Name=WP_016190584.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155065.1;locus_tag=LU631_RS05000;product=cell division protein ZapE;protein_id=WP_016190584.1;transl_table=11 NZ_CP089940.1 RefSeq gene 955566 955994 . + . ID=gene-LU631_RS05005;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=LU631_RS05005;old_locus_tag=LU631_05005 NZ_CP089940.1 Protein Homology CDS 955566 955994 . + 0 ID=cds-WP_016190583.1;Parent=gene-LU631_RS05005;Dbxref=Genbank:WP_016190583.1;Name=WP_016190583.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=LU631_RS05005;product=50S ribosomal protein L13;protein_id=WP_016190583.1;transl_table=11 NZ_CP089940.1 RefSeq gene 956010 956402 . + . ID=gene-LU631_RS05010;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=LU631_RS05010;old_locus_tag=LU631_05010 NZ_CP089940.1 Protein Homology CDS 956010 956402 . + 0 ID=cds-WP_016190582.1;Parent=gene-LU631_RS05010;Dbxref=Genbank:WP_016190582.1;Name=WP_016190582.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=LU631_RS05010;product=30S ribosomal protein S9;protein_id=WP_016190582.1;transl_table=11 NZ_CP089940.1 RefSeq gene 956711 957352 . + . ID=gene-LU631_RS05015;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=LU631_RS05015;old_locus_tag=LU631_05015 NZ_CP089940.1 Protein Homology CDS 956711 957352 . + 0 ID=cds-WP_016190581.1;Parent=gene-LU631_RS05015;Dbxref=Genbank:WP_016190581.1;Name=WP_016190581.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005162411.1;locus_tag=LU631_RS05015;product=stringent starvation protein A;protein_id=WP_016190581.1;transl_table=11 NZ_CP089940.1 RefSeq gene 957359 957853 . + . ID=gene-LU631_RS05020;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=LU631_RS05020;old_locus_tag=LU631_05020 NZ_CP089940.1 Protein Homology CDS 957359 957853 . + 0 ID=cds-WP_016190580.1;Parent=gene-LU631_RS05020;Dbxref=Genbank:WP_016190580.1;Name=WP_016190580.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229067.1;locus_tag=LU631_RS05020;product=ClpXP protease specificity-enhancing factor;protein_id=WP_016190580.1;transl_table=11 NZ_CP089940.1 RefSeq gene 958074 959492 . - . ID=gene-LU631_RS05025;Name=LU631_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05025;old_locus_tag=LU631_05025 NZ_CP089940.1 Protein Homology CDS 958074 959492 . - 0 ID=cds-WP_016190579.1;Parent=gene-LU631_RS05025;Dbxref=Genbank:WP_016190579.1;Name=WP_016190579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=LU631_RS05025;product=glutamate synthase small subunit;protein_id=WP_016190579.1;transl_table=11 NZ_CP089940.1 RefSeq gene 959502 963959 . - . ID=gene-LU631_RS05030;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=LU631_RS05030;old_locus_tag=LU631_05030 NZ_CP089940.1 Protein Homology CDS 959502 963959 . - 0 ID=cds-WP_016190578.1;Parent=gene-LU631_RS05030;Dbxref=Genbank:WP_016190578.1;Name=WP_016190578.1;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229064.1;locus_tag=LU631_RS05030;product=glutamate synthase large subunit;protein_id=WP_016190578.1;transl_table=11 NZ_CP089940.1 RefSeq gene 965036 967441 . + . ID=gene-LU631_RS05035;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=LU631_RS05035;old_locus_tag=LU631_05035 NZ_CP089940.1 Protein Homology CDS 965036 967441 . + 0 ID=cds-WP_016190577.1;Parent=gene-LU631_RS05035;Dbxref=Genbank:WP_016190577.1;Name=WP_016190577.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007704893.1;locus_tag=LU631_RS05035;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_016190577.1;transl_table=11 NZ_CP089940.1 RefSeq gene 968241 968960 . + . ID=gene-LU631_RS05040;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=LU631_RS05040;old_locus_tag=LU631_05040 NZ_CP089940.1 Protein Homology CDS 968241 968960 . + 0 ID=cds-WP_016190576.1;Parent=gene-LU631_RS05040;Dbxref=Genbank:WP_016190576.1;Name=WP_016190576.1;Ontology_term=GO:0009252,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155078.1;locus_tag=LU631_RS05040;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_016190576.1;transl_table=11 NZ_CP089940.1 RefSeq gene 969004 969276 . - . ID=gene-LU631_RS05045;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=LU631_RS05045;old_locus_tag=LU631_05045 NZ_CP089940.1 Protein Homology CDS 969004 969276 . - 0 ID=cds-WP_016190575.1;Parent=gene-LU631_RS05045;Dbxref=Genbank:WP_016190575.1;Name=WP_016190575.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312112.1;locus_tag=LU631_RS05045;product=PTS phosphocarrier protein NPr;protein_id=WP_016190575.1;transl_table=11 NZ_CP089940.1 RefSeq gene 969273 970127 . - . ID=gene-LU631_RS05050;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=LU631_RS05050;old_locus_tag=LU631_05050 NZ_CP089940.1 Protein Homology CDS 969273 970127 . - 0 ID=cds-WP_016190574.1;Parent=gene-LU631_RS05050;Dbxref=Genbank:WP_016190574.1;Name=WP_016190574.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229054.1;locus_tag=LU631_RS05050;product=RNase adapter RapZ;protein_id=WP_016190574.1;transl_table=11 NZ_CP089940.1 RefSeq gene 970444 971664 . + . ID=gene-LU631_RS05055;Name=LU631_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05055;old_locus_tag=LU631_05055 NZ_CP089940.1 Protein Homology CDS 970444 971664 . + 0 ID=cds-WP_046371806.1-2;Parent=gene-LU631_RS05055;Dbxref=Genbank:WP_046371806.1;Name=WP_046371806.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025244073.1;locus_tag=LU631_RS05055;product=ISL3 family transposase;protein_id=WP_046371806.1;transl_table=11 NZ_CP089940.1 RefSeq gene 972427 972912 . - . ID=gene-LU631_RS05060;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=LU631_RS05060;old_locus_tag=LU631_05060 NZ_CP089940.1 Protein Homology CDS 972427 972912 . - 0 ID=cds-WP_016190573.1;Parent=gene-LU631_RS05060;Dbxref=Genbank:WP_016190573.1;Name=WP_016190573.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204054.1;locus_tag=LU631_RS05060;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_016190573.1;transl_table=11 NZ_CP089940.1 RefSeq gene 973110 973397 . - . ID=gene-LU631_RS05065;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=LU631_RS05065;old_locus_tag=LU631_05065 NZ_CP089940.1 Protein Homology CDS 973110 973397 . - 0 ID=cds-WP_016190572.1;Parent=gene-LU631_RS05065;Dbxref=Genbank:WP_016190572.1;Name=WP_016190572.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312109.1;locus_tag=LU631_RS05065;product=ribosome hibernation promoting factor;protein_id=WP_016190572.1;transl_table=11 NZ_CP089940.1 RefSeq gene 973420 974853 . - . ID=gene-LU631_RS05070;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=LU631_RS05070;old_locus_tag=LU631_05070 NZ_CP089940.1 Protein Homology CDS 973420 974853 . - 0 ID=cds-WP_016190571.1;Parent=gene-LU631_RS05070;Dbxref=Genbank:WP_016190571.1;Name=WP_016190571.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312108.1;locus_tag=LU631_RS05070;product=RNA polymerase factor sigma-54;protein_id=WP_016190571.1;transl_table=11 NZ_CP089940.1 RefSeq gene 974900 975625 . - . ID=gene-LU631_RS05075;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=LU631_RS05075;old_locus_tag=LU631_05075 NZ_CP089940.1 Protein Homology CDS 974900 975625 . - 0 ID=cds-WP_016190570.1;Parent=gene-LU631_RS05075;Dbxref=Genbank:WP_016190570.1;Name=WP_016190570.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=LU631_RS05075;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_016190570.1;transl_table=11 NZ_CP089940.1 RefSeq gene 975636 976184 . - . ID=gene-LU631_RS05080;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=LU631_RS05080;old_locus_tag=LU631_05080 NZ_CP089940.1 Protein Homology CDS 975636 976184 . - 0 ID=cds-WP_016190569.1;Parent=gene-LU631_RS05080;Dbxref=Genbank:WP_016190569.1;Name=WP_016190569.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204050.1;locus_tag=LU631_RS05080;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_016190569.1;transl_table=11 NZ_CP089940.1 RefSeq gene 976156 976731 . - . ID=gene-LU631_RS05085;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=LU631_RS05085;old_locus_tag=LU631_05085 NZ_CP089940.1 Protein Homology CDS 976156 976731 . - 0 ID=cds-WP_016190568.1;Parent=gene-LU631_RS05085;Dbxref=Genbank:WP_016190568.1;Name=WP_016190568.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204049.1;locus_tag=LU631_RS05085;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_016190568.1;transl_table=11 NZ_CP089940.1 RefSeq gene 976728 977294 . - . ID=gene-LU631_RS05090;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=LU631_RS05090;old_locus_tag=LU631_05090 NZ_CP089940.1 Protein Homology CDS 976728 977294 . - 0 ID=cds-WP_016190567.1;Parent=gene-LU631_RS05090;Dbxref=Genbank:WP_016190567.1;Name=WP_016190567.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204048.1;locus_tag=LU631_RS05090;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_016190567.1;transl_table=11 NZ_CP089940.1 RefSeq gene 977310 978296 . - . ID=gene-LU631_RS05095;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=LU631_RS05095;old_locus_tag=LU631_05095 NZ_CP089940.1 Protein Homology CDS 977310 978296 . - 0 ID=cds-WP_016190566.1;Parent=gene-LU631_RS05095;Dbxref=Genbank:WP_016190566.1;Name=WP_016190566.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004958137.1;locus_tag=LU631_RS05095;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_016190566.1;transl_table=11 NZ_CP089940.1 RefSeq gene 978302 979291 . - . ID=gene-LU631_RS05100;Name=LU631_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05100;old_locus_tag=LU631_05100 NZ_CP089940.1 Protein Homology CDS 978302 979291 . - 0 ID=cds-WP_016190565.1;Parent=gene-LU631_RS05100;Dbxref=Genbank:WP_016190565.1;Name=WP_016190565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168040.1;locus_tag=LU631_RS05100;product=calcium/sodium antiporter;protein_id=WP_016190565.1;transl_table=11 NZ_CP089940.1 RefSeq gene 979517 980329 . + . ID=gene-LU631_RS05105;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=LU631_RS05105;old_locus_tag=LU631_05105 NZ_CP089940.1 Protein Homology CDS 979517 980329 . + 0 ID=cds-WP_016190564.1;Parent=gene-LU631_RS05105;Dbxref=Genbank:WP_016190564.1;Name=WP_016190564.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017801457.1;locus_tag=LU631_RS05105;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_016190564.1;transl_table=11 NZ_CP089940.1 RefSeq gene 980337 981119 . + . ID=gene-LU631_RS05110;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=LU631_RS05110;old_locus_tag=LU631_05110 NZ_CP089940.1 Protein Homology CDS 980337 981119 . + 0 ID=cds-WP_016190563.1;Parent=gene-LU631_RS05110;Dbxref=Genbank:WP_016190563.1;Name=WP_016190563.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190563.1;locus_tag=LU631_RS05110;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_016190563.1;transl_table=11 NZ_CP089940.1 RefSeq gene 981124 981684 . + . ID=gene-LU631_RS05115;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=LU631_RS05115;old_locus_tag=LU631_05115 NZ_CP089940.1 Protein Homology CDS 981124 981684 . + 0 ID=cds-WP_040465444.1;Parent=gene-LU631_RS05115;Dbxref=Genbank:WP_040465444.1;Name=WP_040465444.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440086.1;locus_tag=LU631_RS05115;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_040465444.1;transl_table=11 NZ_CP089940.1 RefSeq gene 981684 982322 . + . ID=gene-LU631_RS05120;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=LU631_RS05120;old_locus_tag=LU631_05120 NZ_CP089940.1 Protein Homology CDS 981684 982322 . + 0 ID=cds-WP_016190561.1;Parent=gene-LU631_RS05120;Dbxref=Genbank:WP_016190561.1;Name=WP_016190561.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168043.1;locus_tag=LU631_RS05120;product=phospholipid-binding protein MlaC;protein_id=WP_016190561.1;transl_table=11 NZ_CP089940.1 RefSeq gene 982319 982615 . + . ID=gene-LU631_RS05125;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=LU631_RS05125;old_locus_tag=LU631_05125 NZ_CP089940.1 Protein Homology CDS 982319 982615 . + 0 ID=cds-WP_016190560.1;Parent=gene-LU631_RS05125;Dbxref=Genbank:WP_016190560.1;Name=WP_016190560.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155101.1;locus_tag=LU631_RS05125;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_016190560.1;transl_table=11 NZ_CP089940.1 RefSeq gene 982740 982994 . + . ID=gene-LU631_RS05130;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=LU631_RS05130;old_locus_tag=LU631_05130 NZ_CP089940.1 Protein Homology CDS 982740 982994 . + 0 ID=cds-WP_016190559.1;Parent=gene-LU631_RS05130;Dbxref=Genbank:WP_016190559.1;Name=WP_016190559.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=LU631_RS05130;product=BolA family iron metabolism protein IbaG;protein_id=WP_016190559.1;transl_table=11 NZ_CP089940.1 RefSeq gene 983053 984315 . + . ID=gene-LU631_RS05135;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=LU631_RS05135;old_locus_tag=LU631_05135 NZ_CP089940.1 Protein Homology CDS 983053 984315 . + 0 ID=cds-WP_016190558.1;Parent=gene-LU631_RS05135;Dbxref=Genbank:WP_016190558.1;Name=WP_016190558.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204039.1;locus_tag=LU631_RS05135;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_016190558.1;transl_table=11 NZ_CP089940.1 RefSeq gene 984368 984628 . - . ID=gene-LU631_RS05140;Name=LU631_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05140;old_locus_tag=LU631_05140 NZ_CP089940.1 Protein Homology CDS 984368 984628 . - 0 ID=cds-WP_016190557.1;Parent=gene-LU631_RS05140;Dbxref=Genbank:WP_016190557.1;Name=WP_016190557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148389.1;locus_tag=LU631_RS05140;product=helix-turn-helix transcriptional regulator;protein_id=WP_016190557.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 985023 986230 . + . ID=gene-LU631_RS05145;Name=LU631_RS05145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05145;old_locus_tag=LU631_05145;pseudo=true NZ_CP089940.1 Protein Homology CDS 985023 986230 . + 0 ID=cds-LU631_RS05145;Parent=gene-LU631_RS05145;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU631_RS05145;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 986301 987272 . - . ID=gene-LU631_RS05150;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=LU631_RS05150;old_locus_tag=LU631_05150 NZ_CP089940.1 Protein Homology CDS 986301 987272 . - 0 ID=cds-WP_016190556.1;Parent=gene-LU631_RS05150;Dbxref=Genbank:WP_016190556.1;Name=WP_016190556.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010617356.1;locus_tag=LU631_RS05150;product=octaprenyl diphosphate synthase;protein_id=WP_016190556.1;transl_table=11 NZ_CP089940.1 RefSeq gene 987529 987840 . + . ID=gene-LU631_RS05155;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=LU631_RS05155;old_locus_tag=LU631_05155 NZ_CP089940.1 Protein Homology CDS 987529 987840 . + 0 ID=cds-WP_016190555.1;Parent=gene-LU631_RS05155;Dbxref=Genbank:WP_016190555.1;Name=WP_016190555.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=LU631_RS05155;product=50S ribosomal protein L21;protein_id=WP_016190555.1;transl_table=11 NZ_CP089940.1 RefSeq gene 987856 988113 . + . ID=gene-LU631_RS05160;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=LU631_RS05160;old_locus_tag=LU631_05160 NZ_CP089940.1 Protein Homology CDS 987856 988113 . + 0 ID=cds-WP_016190554.1;Parent=gene-LU631_RS05160;Dbxref=Genbank:WP_016190554.1;Name=WP_016190554.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=LU631_RS05160;product=50S ribosomal protein L27;protein_id=WP_016190554.1;transl_table=11 NZ_CP089940.1 RefSeq gene 988409 989575 . + . ID=gene-LU631_RS05165;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=LU631_RS05165;old_locus_tag=LU631_05165 NZ_CP089940.1 Protein Homology CDS 988409 989575 . + 0 ID=cds-WP_016190553.1;Parent=gene-LU631_RS05165;Dbxref=Genbank:WP_016190553.1;Name=WP_016190553.1;Ontology_term=GO:0042254,GO:0005525;gbkey=CDS;gene=cgtA;go_function=GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229032.1;locus_tag=LU631_RS05165;product=Obg family GTPase CgtA;protein_id=WP_016190553.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 990005 990589 . - . ID=gene-LU631_RS05170;Name=LU631_RS05170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05170;old_locus_tag=LU631_05170;partial=true;pseudo=true;start_range=.,990005 NZ_CP089940.1 Protein Homology CDS 990005 990589 . - 0 ID=cds-LU631_RS05170;Parent=gene-LU631_RS05170;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227439.1;locus_tag=LU631_RS05170;partial=true;product=two-component sensor histidine kinase;pseudo=true;start_range=.,990005;transl_table=11 NZ_CP089940.1 RefSeq gene 990586 991248 . - . ID=gene-LU631_RS05175;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=LU631_RS05175;old_locus_tag=LU631_05175 NZ_CP089940.1 Protein Homology CDS 990586 991248 . - 0 ID=cds-WP_016190551.1;Parent=gene-LU631_RS05175;Dbxref=Genbank:WP_016190551.1;Name=WP_016190551.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204028.1;locus_tag=LU631_RS05175;product=two-component system response regulator PmrA;protein_id=WP_016190551.1;transl_table=11 NZ_CP089940.1 RefSeq gene 991254 992687 . - . ID=gene-LU631_RS05180;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=LU631_RS05180;old_locus_tag=LU631_05180 NZ_CP089940.1 Protein Homology CDS 991254 992687 . - 0 ID=cds-WP_016190550.1;Parent=gene-LU631_RS05180;Dbxref=Genbank:WP_016190550.1;Name=WP_016190550.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720377.1;locus_tag=LU631_RS05180;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_016190550.1;transl_table=11 NZ_CP089940.1 RefSeq gene 992937 993413 . + . ID=gene-LU631_RS05185;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=LU631_RS05185;old_locus_tag=LU631_05185 NZ_CP089940.1 Protein Homology CDS 992937 993413 . + 0 ID=cds-WP_016190549.1;Parent=gene-LU631_RS05185;Dbxref=Genbank:WP_016190549.1;Name=WP_016190549.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462210.1;locus_tag=LU631_RS05185;product=transcription elongation factor GreA;protein_id=WP_016190549.1;transl_table=11 NZ_CP089940.1 RefSeq gene 993530 993823 . - . ID=gene-LU631_RS05190;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=LU631_RS05190;old_locus_tag=LU631_05190 NZ_CP089940.1 Protein Homology CDS 993530 993823 . - 0 ID=cds-WP_016190548.1;Parent=gene-LU631_RS05190;Dbxref=Genbank:WP_016190548.1;Name=WP_016190548.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=LU631_RS05190;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_016190548.1;transl_table=11 NZ_CP089940.1 RefSeq gene 993950 994579 . + . ID=gene-LU631_RS05195;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=LU631_RS05195;old_locus_tag=LU631_05195 NZ_CP089940.1 Protein Homology CDS 993950 994579 . + 0 ID=cds-WP_016190547.1;Parent=gene-LU631_RS05195;Dbxref=Genbank:WP_016190547.1;Name=WP_016190547.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156285.1;locus_tag=LU631_RS05195;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_016190547.1;transl_table=11 NZ_CP089940.1 RefSeq gene 994635 996566 . + . ID=gene-LU631_RS05200;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=LU631_RS05200;old_locus_tag=LU631_05200 NZ_CP089940.1 Protein Homology CDS 994635 996566 . + 0 ID=cds-WP_016190546.1;Parent=gene-LU631_RS05200;Dbxref=Genbank:WP_016190546.1;Name=WP_016190546.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=LU631_RS05200;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_016190546.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 996675 997680 . + . ID=gene-LU631_RS05205;Name=LU631_RS05205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05205;old_locus_tag=LU631_05205;pseudo=true NZ_CP089940.1 Protein Homology CDS 996675 997680 . + 0 ID=cds-LU631_RS05205;Parent=gene-LU631_RS05205;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315785.1;locus_tag=LU631_RS05205;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 997979 998815 . + . ID=gene-LU631_RS05210;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=LU631_RS05210;old_locus_tag=LU631_05210 NZ_CP089940.1 Protein Homology CDS 997979 998815 . + 0 ID=cds-WP_016190545.1;Parent=gene-LU631_RS05210;Dbxref=Genbank:WP_016190545.1;Name=WP_016190545.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168055.1;locus_tag=LU631_RS05210;product=dihydropteroate synthase;protein_id=WP_016190545.1;transl_table=11 NZ_CP089940.1 RefSeq gene 998820 1000154 . + . ID=gene-LU631_RS05215;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=LU631_RS05215;old_locus_tag=LU631_05215 NZ_CP089940.1 Protein Homology CDS 998820 1000154 . + 0 ID=cds-WP_016190544.1;Parent=gene-LU631_RS05215;Dbxref=Genbank:WP_016190544.1;Name=WP_016190544.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440104.1;locus_tag=LU631_RS05215;product=phosphoglucosamine mutase;protein_id=WP_016190544.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1000456 1000791 . + . ID=gene-LU631_RS05220;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=LU631_RS05220;old_locus_tag=LU631_05220 NZ_CP089940.1 Protein Homology CDS 1000456 1000791 . + 0 ID=cds-WP_016190543.1;Parent=gene-LU631_RS05220;Dbxref=Genbank:WP_016190543.1;Name=WP_016190543.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312081.1;locus_tag=LU631_RS05220;product=preprotein translocase subunit SecG;protein_id=WP_016190543.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1000842 1000928 . + . ID=gene-LU631_RS05225;Name=LU631_RS05225;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS05225;old_locus_tag=LU631_05225 NZ_CP089940.1 tRNAscan-SE tRNA 1000842 1000928 . + . ID=rna-LU631_RS05225;Parent=gene-LU631_RS05225;anticodon=(pos:1000876..1000878);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS05225;product=tRNA-Leu NZ_CP089940.1 tRNAscan-SE exon 1000842 1000928 . + . ID=exon-LU631_RS05225-1;Parent=rna-LU631_RS05225;anticodon=(pos:1000876..1000878);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS05225;product=tRNA-Leu NZ_CP089940.1 RefSeq gene 1000988 1001064 . + . ID=gene-LU631_RS05230;Name=LU631_RS05230;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS05230;old_locus_tag=LU631_05230 NZ_CP089940.1 tRNAscan-SE tRNA 1000988 1001064 . + . ID=rna-LU631_RS05230;Parent=gene-LU631_RS05230;anticodon=(pos:1001022..1001024);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS05230;product=tRNA-Met NZ_CP089940.1 tRNAscan-SE exon 1000988 1001064 . + . ID=exon-LU631_RS05230-1;Parent=rna-LU631_RS05230;anticodon=(pos:1001022..1001024);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS05230;product=tRNA-Met NZ_CP089940.1 RefSeq gene 1001273 1001725 . + . ID=gene-LU631_RS05235;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=LU631_RS05235;old_locus_tag=LU631_05235 NZ_CP089940.1 Protein Homology CDS 1001273 1001725 . + 0 ID=cds-WP_016190542.1;Parent=gene-LU631_RS05235;Dbxref=Genbank:WP_016190542.1;Name=WP_016190542.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=LU631_RS05235;product=ribosome maturation factor RimP;protein_id=WP_016190542.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1001750 1003255 . + . ID=gene-LU631_RS05240;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=LU631_RS05240;old_locus_tag=LU631_05240 NZ_CP089940.1 Protein Homology CDS 1001750 1003255 . + 0 ID=cds-WP_016190541.1;Parent=gene-LU631_RS05240;Dbxref=Genbank:WP_016190541.1;Name=WP_016190541.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=LU631_RS05240;product=transcription termination factor NusA;protein_id=WP_016190541.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1003280 1005964 . + . ID=gene-LU631_RS05245;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=LU631_RS05245;old_locus_tag=LU631_05245 NZ_CP089940.1 Protein Homology CDS 1003280 1005964 . + 0 ID=cds-WP_016190540.1;Parent=gene-LU631_RS05245;Dbxref=Genbank:WP_016190540.1;Name=WP_016190540.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015701096.1;locus_tag=LU631_RS05245;product=translation initiation factor IF-2;protein_id=WP_016190540.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1006117 1006518 . + . ID=gene-LU631_RS05250;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=LU631_RS05250;old_locus_tag=LU631_05250 NZ_CP089940.1 Protein Homology CDS 1006117 1006518 . + 0 ID=cds-WP_016190539.1;Parent=gene-LU631_RS05250;Dbxref=Genbank:WP_016190539.1;Name=WP_016190539.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462198.1;locus_tag=LU631_RS05250;product=30S ribosome-binding factor RbfA;protein_id=WP_016190539.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1006518 1007462 . + . ID=gene-LU631_RS05255;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=LU631_RS05255;old_locus_tag=LU631_05255 NZ_CP089940.1 Protein Homology CDS 1006518 1007462 . + 0 ID=cds-WP_016190538.1;Parent=gene-LU631_RS05255;Dbxref=Genbank:WP_016190538.1;Name=WP_016190538.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004949.1;locus_tag=LU631_RS05255;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_016190538.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1007572 1007841 . + . ID=gene-LU631_RS05260;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=LU631_RS05260;old_locus_tag=LU631_05260 NZ_CP089940.1 Protein Homology CDS 1007572 1007841 . + 0 ID=cds-WP_016190537.1;Parent=gene-LU631_RS05260;Dbxref=Genbank:WP_016190537.1;Name=WP_016190537.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=LU631_RS05260;product=30S ribosomal protein S15;protein_id=WP_016190537.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1008140 1010269 . + . ID=gene-LU631_RS05265;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=LU631_RS05265;old_locus_tag=LU631_05265 NZ_CP089940.1 Protein Homology CDS 1008140 1010269 . + 0 ID=cds-WP_016190536.1;Parent=gene-LU631_RS05265;Dbxref=Genbank:WP_016190536.1;Name=WP_016190536.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440112.1;locus_tag=LU631_RS05265;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_016190536.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1010408 1011292 . + . ID=gene-LU631_RS05270;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=LU631_RS05270;old_locus_tag=LU631_05270 NZ_CP089940.1 Protein Homology CDS 1010408 1011292 . + 0 ID=cds-WP_016190535.1;Parent=gene-LU631_RS05270;Dbxref=Genbank:WP_016190535.1;Name=WP_016190535.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=LU631_RS05270;product=lipoprotein NlpI;protein_id=WP_016190535.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1011469 1013328 . + . ID=gene-LU631_RS05275;Name=LU631_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05275;old_locus_tag=LU631_05275 NZ_CP089940.1 Protein Homology CDS 1011469 1013328 . + 0 ID=cds-WP_016190534.1;Parent=gene-LU631_RS05275;Dbxref=Genbank:WP_016190534.1;Name=WP_016190534.1;Ontology_term=GO:0000027,GO:0003724,GO:0005524;gbkey=CDS;go_function=RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171718.1;locus_tag=LU631_RS05275;product=DEAD/DEAH family ATP-dependent RNA helicase;protein_id=WP_016190534.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1013581 1014018 . + . ID=gene-LU631_RS05280;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS05280;old_locus_tag=LU631_05280;pseudo=true NZ_CP089940.1 Protein Homology CDS 1013581 1014018 . + 0 ID=cds-LU631_RS05280;Parent=gene-LU631_RS05280;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS05280;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1014116 1015079 . + . ID=gene-LU631_RS05285;Name=LU631_RS05285;end_range=1015079,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05285;old_locus_tag=LU631_05285;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1014116 1015079 . + 0 ID=cds-LU631_RS05285;Parent=gene-LU631_RS05285;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1015079,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315785.1;locus_tag=LU631_RS05285;partial=true;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1015316 1016227 . - . ID=gene-LU631_RS05290;Name=LU631_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05290;old_locus_tag=LU631_05290 NZ_CP089940.1 Protein Homology CDS 1015316 1016227 . - 0 ID=cds-WP_040465441.1;Parent=gene-LU631_RS05290;Dbxref=Genbank:WP_040465441.1;Name=WP_040465441.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785909.1;locus_tag=LU631_RS05290;product=U32 family peptidase;protein_id=WP_040465441.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1016218 1017213 . - . ID=gene-LU631_RS05295;Name=LU631_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05295;old_locus_tag=LU631_05295 NZ_CP089940.1 Protein Homology CDS 1016218 1017213 . - 0 ID=cds-WP_016190529.1;Parent=gene-LU631_RS05295;Dbxref=Genbank:WP_016190529.1;Name=WP_016190529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=LU631_RS05295;product=U32 family peptidase;protein_id=WP_016190529.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1017419 1017943 . + . ID=gene-LU631_RS05300;Name=LU631_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05300;old_locus_tag=LU631_05300 NZ_CP089940.1 Protein Homology CDS 1017419 1017943 . + 0 ID=cds-WP_016190528.1;Parent=gene-LU631_RS05300;Dbxref=Genbank:WP_016190528.1;Name=WP_016190528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017801415.1;locus_tag=LU631_RS05300;product=SCP2 domain-containing protein;protein_id=WP_016190528.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1017937 1018440 . + . ID=gene-LU631_RS05305;Name=LU631_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05305;old_locus_tag=LU631_05305 NZ_CP089940.1 Protein Homology CDS 1017937 1018440 . + 0 ID=cds-WP_016190527.1;Parent=gene-LU631_RS05305;Dbxref=Genbank:WP_016190527.1;Name=WP_016190527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543113.1;locus_tag=LU631_RS05305;product=N-acetyltransferase;protein_id=WP_016190527.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1018417 1018764 . - . ID=gene-LU631_RS05310;Name=LU631_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05310;old_locus_tag=LU631_05310 NZ_CP089940.1 Protein Homology CDS 1018417 1018764 . - 0 ID=cds-WP_152664253.1;Parent=gene-LU631_RS05310;Dbxref=Genbank:WP_152664253.1;Name=WP_152664253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851049.1;locus_tag=LU631_RS05310;product=GIY-YIG nuclease family protein;protein_id=WP_152664253.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1018837 1019265 . + . ID=gene-LU631_RS05315;Name=LU631_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05315;old_locus_tag=LU631_05315 NZ_CP089940.1 Protein Homology CDS 1018837 1019265 . + 0 ID=cds-WP_016190525.1;Parent=gene-LU631_RS05315;Dbxref=Genbank:WP_016190525.1;Name=WP_016190525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204004.1;locus_tag=LU631_RS05315;product=YhbP family protein;protein_id=WP_016190525.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1019271 1019735 . - . ID=gene-LU631_RS05320;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=LU631_RS05320;old_locus_tag=LU631_05320 NZ_CP089940.1 Protein Homology CDS 1019271 1019735 . - 0 ID=cds-WP_016190524.1;Parent=gene-LU631_RS05320;Dbxref=Genbank:WP_016190524.1;Name=WP_016190524.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224790.1;locus_tag=LU631_RS05320;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_016190524.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1019732 1021870 . - . ID=gene-LU631_RS05325;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=LU631_RS05325;old_locus_tag=LU631_05325 NZ_CP089940.1 Protein Homology CDS 1019732 1021870 . - 0 ID=cds-WP_016190523.1;Parent=gene-LU631_RS05325;Dbxref=Genbank:WP_016190523.1;Name=WP_016190523.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=LU631_RS05325;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_016190523.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1022130 1024706 . + . ID=gene-LU631_RS05330;Name=LU631_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05330;old_locus_tag=LU631_05330 NZ_CP089940.1 Protein Homology CDS 1022130 1024706 . + 0 ID=cds-WP_016190522.1;Parent=gene-LU631_RS05330;Dbxref=Genbank:WP_016190522.1;Name=WP_016190522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171720.1;locus_tag=LU631_RS05330;product=DEAD/DEAH box helicase;protein_id=WP_016190522.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1024693 1026372 . - . ID=gene-LU631_RS05335;Name=LU631_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05335;old_locus_tag=LU631_05335 NZ_CP089940.1 Protein Homology CDS 1024693 1026372 . - 0 ID=cds-WP_016190521.1;Parent=gene-LU631_RS05335;Dbxref=Genbank:WP_016190521.1;Name=WP_016190521.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017801405.1;locus_tag=LU631_RS05335;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_016190521.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1026574 1026960 . - . ID=gene-LU631_RS05340;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=LU631_RS05340;old_locus_tag=LU631_05340 NZ_CP089940.1 Protein Homology CDS 1026574 1026960 . - 0 ID=cds-WP_016190520.1;Parent=gene-LU631_RS05340;Dbxref=Genbank:WP_016190520.1;Name=WP_016190520.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=LU631_RS05340;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_016190520.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1027081 1027545 . - . ID=gene-LU631_RS05345;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=LU631_RS05345;old_locus_tag=LU631_05345 NZ_CP089940.1 Protein Homology CDS 1027081 1027545 . - 0 ID=cds-WP_016190519.1;Parent=gene-LU631_RS05345;Dbxref=Genbank:WP_016190519.1;Name=WP_016190519.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrI;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010251684.1;locus_tag=LU631_RS05345;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_016190519.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1027556 1028491 . - . ID=gene-LU631_RS05350;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=LU631_RS05350;old_locus_tag=LU631_05350 NZ_CP089940.1 Protein Homology CDS 1027556 1028491 . - 0 ID=cds-WP_016190518.1;Parent=gene-LU631_RS05350;Dbxref=Genbank:WP_016190518.1;Name=WP_016190518.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012125907.1;locus_tag=LU631_RS05350;product=aspartate carbamoyltransferase;protein_id=WP_016190518.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1028770 1029210 . + . ID=gene-LU631_RS05355;Name=tnpA;end_range=1029210,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS05355;old_locus_tag=LU631_05355;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1028770 1029210 . + 0 ID=cds-LU631_RS05355;Parent=gene-LU631_RS05355;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1029210,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU631_RS05355;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1029492 1029932 . - . ID=gene-LU631_RS05360;Name=LU631_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05360;old_locus_tag=LU631_05360 NZ_CP089940.1 GeneMarkS-2+ CDS 1029492 1029932 . - 0 ID=cds-WP_016190516.1;Parent=gene-LU631_RS05360;Dbxref=Genbank:WP_016190516.1;Name=WP_016190516.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS05360;product=hypothetical protein;protein_id=WP_016190516.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1030119 1030490 . - . ID=gene-LU631_RS05365;Name=LU631_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05365;old_locus_tag=LU631_05365 NZ_CP089940.1 GeneMarkS-2+ CDS 1030119 1030490 . - 0 ID=cds-WP_016190515.1;Parent=gene-LU631_RS05365;Dbxref=Genbank:WP_016190515.1;Name=WP_016190515.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS05365;product=hypothetical protein;protein_id=WP_016190515.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1030498 1031498 . - . ID=gene-LU631_RS05370;Name=LU631_RS05370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05370;old_locus_tag=LU631_05370;partial=true;pseudo=true;start_range=.,1030498 NZ_CP089940.1 Protein Homology CDS 1030498 1031498 . - 0 ID=cds-LU631_RS05370;Parent=gene-LU631_RS05370;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611500.1;locus_tag=LU631_RS05370;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1030498;transl_table=11 NZ_CP089940.1 RefSeq gene 1031573 1032160 . - . ID=gene-LU631_RS05375;Name=LU631_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05375;old_locus_tag=LU631_05375 NZ_CP089940.1 Protein Homology CDS 1031573 1032160 . - 0 ID=cds-WP_051124342.1;Parent=gene-LU631_RS05375;Dbxref=Genbank:WP_051124342.1;Name=WP_051124342.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF017640.2;locus_tag=LU631_RS05375;product=replication endonuclease;protein_id=WP_051124342.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1032525 1032848 . - . ID=gene-LU631_RS05380;Name=LU631_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05380;old_locus_tag=LU631_05380 NZ_CP089940.1 GeneMarkS-2+ CDS 1032525 1032848 . - 0 ID=cds-WP_051124341.1;Parent=gene-LU631_RS05380;Dbxref=Genbank:WP_051124341.1;Name=WP_051124341.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS05380;product=hypothetical protein;protein_id=WP_051124341.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1032927 1034792 . - . ID=gene-LU631_RS05385;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=LU631_RS05385;old_locus_tag=LU631_05385 NZ_CP089940.1 Protein Homology CDS 1032927 1034792 . - 0 ID=cds-WP_016190512.1;Parent=gene-LU631_RS05385;Dbxref=Genbank:WP_016190512.1;Name=WP_016190512.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013507617.1;locus_tag=LU631_RS05385;product=low affinity potassium transporter Kup;protein_id=WP_016190512.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1035094 1036527 . + . ID=gene-LU631_RS05390;Name=LU631_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05390;old_locus_tag=LU631_05390 NZ_CP089940.1 Protein Homology CDS 1035094 1036527 . + 0 ID=cds-WP_016190510.1;Parent=gene-LU631_RS05390;Dbxref=Genbank:WP_016190510.1;Name=WP_016190510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105785.1;locus_tag=LU631_RS05390;product=trehalose-6-phosphate synthase;protein_id=WP_016190510.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1036625 1037635 . - . ID=gene-LU631_RS05395;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=LU631_RS05395;old_locus_tag=LU631_05395 NZ_CP089940.1 Protein Homology CDS 1036625 1037635 . - 0 ID=cds-WP_016190509.1;Parent=gene-LU631_RS05395;Dbxref=Genbank:WP_016190509.1;Name=WP_016190509.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851006.1;locus_tag=LU631_RS05395;product=ornithine carbamoyltransferase;protein_id=WP_016190509.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1037793 1038209 . + . ID=gene-LU631_RS05400;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=LU631_RS05400;old_locus_tag=LU631_05400 NZ_CP089940.1 Protein Homology CDS 1037793 1038209 . + 0 ID=cds-WP_016190508.1;Parent=gene-LU631_RS05400;Dbxref=Genbank:WP_016190508.1;Name=WP_016190508.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440126.1;locus_tag=LU631_RS05400;product=ribonuclease E inhibitor RraB;protein_id=WP_016190508.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1038319 1039080 . + . ID=gene-LU631_RS05405;Name=LU631_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05405;old_locus_tag=LU631_05405 NZ_CP089940.1 Protein Homology CDS 1038319 1039080 . + 0 ID=cds-WP_016190507.1;Parent=gene-LU631_RS05405;Dbxref=Genbank:WP_016190507.1;Name=WP_016190507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013507726.1;locus_tag=LU631_RS05405;product=tRNA-(ms[2]io[6]A)-hydroxylase;protein_id=WP_016190507.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1039157 1039854 . + . ID=gene-LU631_RS05410;Name=LU631_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05410;old_locus_tag=LU631_05410 NZ_CP089940.1 Protein Homology CDS 1039157 1039418 . + 0 ID=cds-WP_233481990.1;Parent=gene-LU631_RS05410;Dbxref=Genbank:WP_233481990.1;Name=WP_233481990.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS05410;product=IS1 family transposase;protein_id=WP_233481990.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 1039418 1039854 . + 2 ID=cds-WP_233481990.1;Parent=gene-LU631_RS05410;Dbxref=Genbank:WP_233481990.1;Name=WP_233481990.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS05410;product=IS1 family transposase;protein_id=WP_233481990.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1039879 1040337 . + . ID=gene-LU631_RS05415;Name=LU631_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05415;old_locus_tag=LU631_05415 NZ_CP089940.1 Protein Homology CDS 1039879 1040337 . + 0 ID=cds-WP_051124340.1;Parent=gene-LU631_RS05415;Dbxref=Genbank:WP_051124340.1;Name=WP_051124340.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012521.2;locus_tag=LU631_RS05415;product=phosphoglycerate mutase family protein;protein_id=WP_051124340.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1040561 1041064 . - . ID=gene-LU631_RS05420;Name=LU631_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05420;old_locus_tag=LU631_05420 NZ_CP089940.1 Protein Homology CDS 1040561 1041064 . - 0 ID=cds-WP_016190504.1;Parent=gene-LU631_RS05420;Dbxref=Genbank:WP_016190504.1;Name=WP_016190504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008104250.1;locus_tag=LU631_RS05420;product=GNAT family N-acetyltransferase;protein_id=WP_016190504.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1041255 1041923 . + . ID=gene-LU631_RS05425;Name=LU631_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05425;old_locus_tag=LU631_05425 NZ_CP089940.1 GeneMarkS-2+ CDS 1041255 1041923 . + 0 ID=cds-WP_016190503.1;Parent=gene-LU631_RS05425;Dbxref=Genbank:WP_016190503.1;Name=WP_016190503.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS05425;product=hypothetical protein;protein_id=WP_016190503.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1042104 1044959 . - . ID=gene-LU631_RS05430;Name=LU631_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05430;old_locus_tag=LU631_05430 NZ_CP089940.1 Protein Homology CDS 1042104 1044959 . - 0 ID=cds-WP_016190502.1;Parent=gene-LU631_RS05430;Dbxref=Genbank:WP_016190502.1;Name=WP_016190502.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=LU631_RS05430;product=valine--tRNA ligase;protein_id=WP_016190502.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1044965 1045420 . - . ID=gene-LU631_RS05435;Name=LU631_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05435;old_locus_tag=LU631_05435 NZ_CP089940.1 Protein Homology CDS 1044965 1045420 . - 0 ID=cds-WP_016190501.1;Parent=gene-LU631_RS05435;Dbxref=Genbank:WP_016190501.1;Name=WP_016190501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666754.1;locus_tag=LU631_RS05435;product=DNA polymerase III subunit chi;protein_id=WP_016190501.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1045424 1046935 . - . ID=gene-LU631_RS05440;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=LU631_RS05440;old_locus_tag=LU631_05440 NZ_CP089940.1 Protein Homology CDS 1045424 1046935 . - 0 ID=cds-WP_016190500.1;Parent=gene-LU631_RS05440;Dbxref=Genbank:WP_016190500.1;Name=WP_016190500.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007767120.1;locus_tag=LU631_RS05440;product=leucyl aminopeptidase;protein_id=WP_016190500.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1047226 1048326 . + . ID=gene-LU631_RS05445;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=LU631_RS05445;old_locus_tag=LU631_05445 NZ_CP089940.1 Protein Homology CDS 1047226 1048326 . + 0 ID=cds-WP_016190499.1;Parent=gene-LU631_RS05445;Dbxref=Genbank:WP_016190499.1;Name=WP_016190499.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155163.1;locus_tag=LU631_RS05445;product=LPS export ABC transporter permease LptF;protein_id=WP_016190499.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1048326 1049402 . + . ID=gene-LU631_RS05450;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=LU631_RS05450;old_locus_tag=LU631_05450 NZ_CP089940.1 Protein Homology CDS 1048326 1049402 . + 0 ID=cds-WP_016190498.1;Parent=gene-LU631_RS05450;Dbxref=Genbank:WP_016190498.1;Name=WP_016190498.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155164.1;locus_tag=LU631_RS05450;product=LPS export ABC transporter permease LptG;protein_id=WP_016190498.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1049715 1051004 . - . ID=gene-LU631_RS05455;Name=LU631_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05455;old_locus_tag=LU631_05455 NZ_CP089940.1 Protein Homology CDS 1049715 1051004 . - 0 ID=cds-WP_040465480.1;Parent=gene-LU631_RS05455;Dbxref=Genbank:WP_040465480.1;Name=WP_040465480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121813.1;locus_tag=LU631_RS05455;product=DUF445 family protein;protein_id=WP_040465480.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1051165 1052547 . - . ID=gene-LU631_RS05460;Name=LU631_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05460;old_locus_tag=LU631_05460 NZ_CP089940.1 GeneMarkS-2+ CDS 1051165 1052547 . - 0 ID=cds-WP_016190496.1;Parent=gene-LU631_RS05460;Dbxref=Genbank:WP_016190496.1;Name=WP_016190496.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS05460;product=hypothetical protein;protein_id=WP_016190496.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1052867 1053307 . + . ID=gene-LU631_RS05465;Name=LU631_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05465;old_locus_tag=LU631_05465 NZ_CP089940.1 Protein Homology CDS 1052867 1053307 . + 0 ID=cds-WP_016190495.1;Parent=gene-LU631_RS05465;Dbxref=Genbank:WP_016190495.1;Name=WP_016190495.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: protein motif:HMM:NF013933.2;locus_tag=LU631_RS05465;product=LysE family transporter;protein_id=WP_016190495.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1053391 1053891 . - . ID=gene-LU631_RS05470;Name=LU631_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05470;old_locus_tag=LU631_05470 NZ_CP089940.1 Protein Homology CDS 1053391 1053891 . - 0 ID=cds-WP_016190494.1;Parent=gene-LU631_RS05470;Dbxref=Genbank:WP_016190494.1;Name=WP_016190494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001308243.1;locus_tag=LU631_RS05470;product=DUF2501 domain-containing protein;protein_id=WP_016190494.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1054289 1054373 . + . ID=gene-LU631_RS05475;Name=LU631_RS05475;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS05475;old_locus_tag=LU631_05475 NZ_CP089940.1 tRNAscan-SE tRNA 1054289 1054373 . + . ID=rna-LU631_RS05475;Parent=gene-LU631_RS05475;anticodon=(pos:1054323..1054325);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS05475;product=tRNA-Leu NZ_CP089940.1 tRNAscan-SE exon 1054289 1054373 . + . ID=exon-LU631_RS05475-1;Parent=rna-LU631_RS05475;anticodon=(pos:1054323..1054325);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS05475;product=tRNA-Leu NZ_CP089940.1 RefSeq gene 1054563 1055810 . + . ID=gene-LU631_RS05480;Name=LU631_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05480;old_locus_tag=LU631_05480 NZ_CP089940.1 Protein Homology CDS 1054563 1055810 . + 0 ID=cds-WP_016190493.1;Parent=gene-LU631_RS05480;Dbxref=Genbank:WP_016190493.1;Name=WP_016190493.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007705337.1;locus_tag=LU631_RS05480;product=tyrosine-type recombinase/integrase;protein_id=WP_016190493.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1055921 1056790 . + . ID=gene-LU631_RS05485;Name=LU631_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05485;old_locus_tag=LU631_05485 NZ_CP089940.1 Protein Homology CDS 1055921 1056790 . + 0 ID=cds-WP_016190492.1;Parent=gene-LU631_RS05485;Dbxref=Genbank:WP_016190492.1;Name=WP_016190492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844313.1;locus_tag=LU631_RS05485;product=DUF6387 family protein;protein_id=WP_016190492.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1057035 1057460 . - . ID=gene-LU631_RS05490;Name=LU631_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05490;old_locus_tag=LU631_05490 NZ_CP089940.1 Protein Homology CDS 1057035 1057460 . - 0 ID=cds-WP_016190491.1;Parent=gene-LU631_RS05490;Dbxref=Genbank:WP_016190491.1;Name=WP_016190491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000608199.1;locus_tag=LU631_RS05490;product=hypothetical protein;protein_id=WP_016190491.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1057884 1058087 . + . ID=gene-LU631_RS05495;Name=LU631_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05495;old_locus_tag=LU631_05495 NZ_CP089940.1 Protein Homology CDS 1057884 1058087 . + 0 ID=cds-WP_016190490.1;Parent=gene-LU631_RS05495;Dbxref=Genbank:WP_016190490.1;Name=WP_016190490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190490.1;locus_tag=LU631_RS05495;product=AlpA family transcriptional regulator;protein_id=WP_016190490.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1058467 1059672 . + . ID=gene-LU631_RS05500;Name=LU631_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05500;old_locus_tag=LU631_05500 NZ_CP089940.1 Protein Homology CDS 1058467 1059672 . + 0 ID=cds-WP_016190489.1;Parent=gene-LU631_RS05500;Dbxref=Genbank:WP_016190489.1;Name=WP_016190489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311539.1;locus_tag=LU631_RS05500;product=site-specific integrase;protein_id=WP_016190489.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1059674 1060987 . + . ID=gene-LU631_RS05505;Name=LU631_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05505;old_locus_tag=LU631_05505 NZ_CP089940.1 Protein Homology CDS 1059674 1060987 . + 0 ID=cds-WP_016190488.1;Parent=gene-LU631_RS05505;Dbxref=Genbank:WP_016190488.1;Name=WP_016190488.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311538.1;locus_tag=LU631_RS05505;product=tyrosine-type recombinase/integrase;protein_id=WP_016190488.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1060984 1062615 . + . ID=gene-LU631_RS05510;Name=LU631_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05510;old_locus_tag=LU631_05510 NZ_CP089940.1 Protein Homology CDS 1060984 1062615 . + 0 ID=cds-WP_016190487.1;Parent=gene-LU631_RS05510;Dbxref=Genbank:WP_016190487.1;Name=WP_016190487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311537.1;locus_tag=LU631_RS05510;product=hypothetical protein;protein_id=WP_016190487.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1062616 1063014 . + . ID=gene-LU631_RS05515;Name=LU631_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05515;old_locus_tag=LU631_05515 NZ_CP089940.1 Protein Homology CDS 1062616 1063014 . + 0 ID=cds-WP_016190486.1;Parent=gene-LU631_RS05515;Dbxref=Genbank:WP_016190486.1;Name=WP_016190486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311536.1;locus_tag=LU631_RS05515;product=hypothetical protein;protein_id=WP_016190486.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1063112 1063525 . + . ID=gene-LU631_RS05520;Name=LU631_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05520;old_locus_tag=LU631_05520 NZ_CP089940.1 Protein Homology CDS 1063112 1063525 . + 0 ID=cds-WP_040465440.1;Parent=gene-LU631_RS05520;Dbxref=Genbank:WP_040465440.1;Name=WP_040465440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311535.1;locus_tag=LU631_RS05520;product=hypothetical protein;protein_id=WP_040465440.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1063926 1065135 . + . ID=gene-LU631_RS05525;Name=LU631_RS05525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05525;old_locus_tag=LU631_05525;pseudo=true NZ_CP089940.1 Protein Homology CDS 1063926 1065135 . + 0 ID=cds-LU631_RS05525;Parent=gene-LU631_RS05525;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS05525;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1065230 1065520 . - . ID=gene-LU631_RS05530;Name=LU631_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05530;old_locus_tag=LU631_05530 NZ_CP089940.1 Protein Homology CDS 1065230 1065520 . - 0 ID=cds-WP_016190484.1;Parent=gene-LU631_RS05530;Dbxref=Genbank:WP_016190484.1;Name=WP_016190484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010305216.1;locus_tag=LU631_RS05530;product=hypothetical protein;protein_id=WP_016190484.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1065517 1066110 . - . ID=gene-LU631_RS05535;Name=LU631_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05535;old_locus_tag=LU631_05535 NZ_CP089940.1 Protein Homology CDS 1065517 1066110 . - 0 ID=cds-WP_233481991.1;Parent=gene-LU631_RS05535;Dbxref=Genbank:WP_233481991.1;Name=WP_233481991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269820.1;locus_tag=LU631_RS05535;product=DUF4755 domain-containing protein;protein_id=WP_233481991.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1066330 1067517 . - . ID=gene-LU631_RS05540;Name=LU631_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05540;old_locus_tag=LU631_05540 NZ_CP089940.1 Protein Homology CDS 1066330 1067517 . - 0 ID=cds-WP_016190482.1;Parent=gene-LU631_RS05540;Dbxref=Genbank:WP_016190482.1;Name=WP_016190482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009008308.1;locus_tag=LU631_RS05540;product=relaxase/mobilization nuclease domain-containing protein;protein_id=WP_016190482.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1067517 1067930 . - . ID=gene-LU631_RS05545;Name=LU631_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05545;old_locus_tag=LU631_05545 NZ_CP089940.1 Protein Homology CDS 1067517 1067930 . - 0 ID=cds-WP_016190481.1;Parent=gene-LU631_RS05545;Dbxref=Genbank:WP_016190481.1;Name=WP_016190481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190481.1;locus_tag=LU631_RS05545;product=hypothetical protein;protein_id=WP_016190481.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1068196 1068939 . - . ID=gene-LU631_RS05550;Name=LU631_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05550;old_locus_tag=LU631_05550 NZ_CP089940.1 GeneMarkS-2+ CDS 1068196 1068939 . - 0 ID=cds-WP_016190480.1;Parent=gene-LU631_RS05550;Dbxref=Genbank:WP_016190480.1;Name=WP_016190480.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS05550;product=hypothetical protein;protein_id=WP_016190480.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1068939 1070042 . - . ID=gene-LU631_RS05555;Name=LU631_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05555;old_locus_tag=LU631_05555 NZ_CP089940.1 GeneMarkS-2+ CDS 1068939 1070042 . - 0 ID=cds-WP_016190479.1;Parent=gene-LU631_RS05555;Dbxref=Genbank:WP_016190479.1;Name=WP_016190479.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS05555;product=hypothetical protein;protein_id=WP_016190479.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1070029 1072338 . - . ID=gene-LU631_RS05560;Name=LU631_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05560;old_locus_tag=LU631_05560 NZ_CP089940.1 Protein Homology CDS 1070029 1072338 . - 0 ID=cds-WP_016190478.1;Parent=gene-LU631_RS05560;Dbxref=Genbank:WP_016190478.1;Name=WP_016190478.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024977.2;locus_tag=LU631_RS05560;product=sensor histidine kinase;protein_id=WP_016190478.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1072331 1074016 . - . ID=gene-LU631_RS05565;Name=LU631_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05565;old_locus_tag=LU631_05565 NZ_CP089940.1 Protein Homology CDS 1072331 1074016 . - 0 ID=cds-WP_016190477.1;Parent=gene-LU631_RS05565;Dbxref=Genbank:WP_016190477.1;Name=WP_016190477.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=LU631_RS05565;product=N-6 DNA methylase;protein_id=WP_016190477.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1074769 1075362 . + . ID=gene-LU631_RS05570;Name=LU631_RS05570;end_range=1075362,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05570;old_locus_tag=LU631_05570;partial=true;pseudo=true;start_range=.,1074769 NZ_CP089940.1 Protein Homology CDS 1074769 1075362 . + 0 ID=cds-LU631_RS05570;Parent=gene-LU631_RS05570;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1075362,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322911.1;locus_tag=LU631_RS05570;partial=true;product=integrase;pseudo=true;start_range=.,1074769;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1075435 1076598 . + . ID=gene-LU631_RS05575;Name=LU631_RS05575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05575;old_locus_tag=LU631_05575;pseudo=true NZ_CP089940.1 Protein Homology CDS 1075435 1076598 . + 0 ID=cds-LU631_RS05575;Parent=gene-LU631_RS05575;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612263.1;locus_tag=LU631_RS05575;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1077010 1078851 . - . ID=gene-LU631_RS05580;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=LU631_RS05580;old_locus_tag=LU631_05580 NZ_CP089940.1 Protein Homology CDS 1077010 1078851 . - 0 ID=cds-WP_016190475.1;Parent=gene-LU631_RS05580;Dbxref=Genbank:WP_016190475.1;Name=WP_016190475.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228906.1;locus_tag=LU631_RS05580;product=RNA polymerase sigma factor RpoD;protein_id=WP_016190475.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1079162 1080919 . - . ID=gene-LU631_RS05585;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=LU631_RS05585;old_locus_tag=LU631_05585 NZ_CP089940.1 Protein Homology CDS 1079162 1080919 . - 0 ID=cds-WP_016190474.1;Parent=gene-LU631_RS05585;Dbxref=Genbank:WP_016190474.1;Name=WP_016190474.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168316.1;locus_tag=LU631_RS05585;product=DNA primase;protein_id=WP_016190474.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1081019 1081234 . - . ID=gene-LU631_RS05590;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LU631_RS05590;old_locus_tag=LU631_05590 NZ_CP089940.1 Protein Homology CDS 1081019 1081234 . - 0 ID=cds-WP_001144069.1;Parent=gene-LU631_RS05590;Dbxref=Genbank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=LU631_RS05590;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1081539 1082561 . + . ID=gene-LU631_RS05595;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=LU631_RS05595;old_locus_tag=LU631_05595 NZ_CP089940.1 Protein Homology CDS 1081539 1082561 . + 0 ID=cds-WP_016190473.1;Parent=gene-LU631_RS05595;Dbxref=Genbank:WP_016190473.1;Name=WP_016190473.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440175.1;locus_tag=LU631_RS05595;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_016190473.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1082936 1083633 . - . ID=gene-LU631_RS05600;Name=LU631_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05600;old_locus_tag=LU631_05600 NZ_CP089940.1 Protein Homology CDS 1083384 1083633 . - 0 ID=cds-WP_233481915.1;Parent=gene-LU631_RS05600;Dbxref=Genbank:WP_233481915.1;Name=WP_233481915.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS05600;product=IS1 family transposase;protein_id=WP_233481915.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 1082936 1083384 . - 2 ID=cds-WP_233481915.1;Parent=gene-LU631_RS05600;Dbxref=Genbank:WP_233481915.1;Name=WP_233481915.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS05600;product=IS1 family transposase;protein_id=WP_233481915.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1083817 1084413 . - . ID=gene-LU631_RS05605;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=LU631_RS05605;old_locus_tag=LU631_05605 NZ_CP089940.1 Protein Homology CDS 1083817 1084413 . - 0 ID=cds-WP_016190472.1;Parent=gene-LU631_RS05605;Dbxref=Genbank:WP_016190472.1;Name=WP_016190472.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666793.1;locus_tag=LU631_RS05605;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_016190472.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1084522 1084881 . + . ID=gene-LU631_RS05610;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=LU631_RS05610;old_locus_tag=LU631_05610 NZ_CP089940.1 Protein Homology CDS 1084522 1084881 . + 0 ID=cds-WP_016190471.1;Parent=gene-LU631_RS05610;Dbxref=Genbank:WP_016190471.1;Name=WP_016190471.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666794.1;locus_tag=LU631_RS05610;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_016190471.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1085024 1085848 . + . ID=gene-LU631_RS05615;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=LU631_RS05615;old_locus_tag=LU631_05615 NZ_CP089940.1 Protein Homology CDS 1085024 1085848 . + 0 ID=cds-WP_016190470.1;Parent=gene-LU631_RS05615;Dbxref=Genbank:WP_016190470.1;Name=WP_016190470.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000796236.1;locus_tag=LU631_RS05615;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_016190470.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1085866 1087110 . - . ID=gene-LU631_RS05620;Name=LU631_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05620;old_locus_tag=LU631_05620 NZ_CP089940.1 Protein Homology CDS 1085866 1087110 . - 0 ID=cds-WP_016190469.1;Parent=gene-LU631_RS05620;Dbxref=Genbank:WP_016190469.1;Name=WP_016190469.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155212.1;locus_tag=LU631_RS05620;product=multifunctional CCA addition/repair protein;protein_id=WP_016190469.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1087237 1087857 . - . ID=gene-LU631_RS05625;Name=LU631_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05625;old_locus_tag=LU631_05625 NZ_CP089940.1 Protein Homology CDS 1087237 1087857 . - 0 ID=cds-WP_016190468.1;Parent=gene-LU631_RS05625;Dbxref=Genbank:WP_016190468.1;Name=WP_016190468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009087298.1;locus_tag=LU631_RS05625;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_016190468.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1088065 1089369 . + . ID=gene-LU631_RS05630;Name=LU631_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05630;old_locus_tag=LU631_05630 NZ_CP089940.1 Protein Homology CDS 1088065 1089369 . + 0 ID=cds-WP_016190467.1;Parent=gene-LU631_RS05630;Dbxref=Genbank:WP_016190467.1;Name=WP_016190467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440181.1;locus_tag=LU631_RS05630;product=inorganic triphosphatase;protein_id=WP_016190467.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1089420 1092272 . + . ID=gene-LU631_RS05635;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=LU631_RS05635;old_locus_tag=LU631_05635 NZ_CP089940.1 Protein Homology CDS 1089420 1092272 . + 0 ID=cds-WP_016190466.1;Parent=gene-LU631_RS05635;Dbxref=Genbank:WP_016190466.1;Name=WP_016190466.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171847.1;locus_tag=LU631_RS05635;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_016190466.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1092376 1093803 . + . ID=gene-LU631_RS05640;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=LU631_RS05640;old_locus_tag=LU631_05640 NZ_CP089940.1 Protein Homology CDS 1092376 1093803 . + 0 ID=cds-WP_016190465.1;Parent=gene-LU631_RS05640;Dbxref=Genbank:WP_016190465.1;Name=WP_016190465.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017801262.1;locus_tag=LU631_RS05640;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_016190465.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1094142 1094405 . - . ID=gene-LU631_RS05645;Name=LU631_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05645;old_locus_tag=LU631_05645 NZ_CP089940.1 Protein Homology CDS 1094142 1094405 . - 0 ID=cds-WP_016190464.1;Parent=gene-LU631_RS05645;Dbxref=Genbank:WP_016190464.1;Name=WP_016190464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369643.1;locus_tag=LU631_RS05645;product=accessory factor UbiK family protein;protein_id=WP_016190464.1;transl_table=11 NZ_CP089940.1 cmsearch riboswitch 1094553 1094703 . + . ID=id-NZ_CP089940.1:1094553..1094703;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP089940.1 RefSeq gene 1094808 1095464 . + . ID=gene-LU631_RS05650;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=LU631_RS05650;old_locus_tag=LU631_05650 NZ_CP089940.1 Protein Homology CDS 1094808 1095464 . + 0 ID=cds-WP_016190462.1;Parent=gene-LU631_RS05650;Dbxref=Genbank:WP_016190462.1;Name=WP_016190462.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666802.1;locus_tag=LU631_RS05650;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_016190462.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1096128 1097336 . + . ID=gene-LU631_RS05655;Name=LU631_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05655;old_locus_tag=LU631_05655 NZ_CP089940.1 Protein Homology CDS 1096128 1097336 . + 0 ID=cds-WP_046372200.1;Parent=gene-LU631_RS05655;Dbxref=Genbank:WP_046372200.1;Name=WP_046372200.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS05655;product=IS256 family transposase;protein_id=WP_046372200.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1097827 1098612 . + . ID=gene-LU631_RS05660;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=pseudogene;locus_tag=LU631_RS05660;old_locus_tag=LU631_05660;pseudo=true NZ_CP089940.1 Protein Homology CDS 1097827 1098612 . + 0 ID=cds-LU631_RS05660;Parent=gene-LU631_RS05660;Note=internal stop;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001491319.1;locus_tag=LU631_RS05660;product=4%2C5-DOPA dioxygenase extradiol;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1098648 1099808 . - . ID=gene-LU631_RS05665;Name=LU631_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05665;old_locus_tag=LU631_05665 NZ_CP089940.1 Protein Homology CDS 1098648 1099808 . - 0 ID=cds-WP_016190459.1;Parent=gene-LU631_RS05665;Dbxref=Genbank:WP_016190459.1;Name=WP_016190459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359058.1;locus_tag=LU631_RS05665;product=glutathionylspermidine synthase family protein;protein_id=WP_016190459.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1099815 1100471 . - . ID=gene-LU631_RS05670;Name=LU631_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05670;old_locus_tag=LU631_05670 NZ_CP089940.1 Protein Homology CDS 1099815 1100471 . - 0 ID=cds-WP_016190458.1;Parent=gene-LU631_RS05670;Dbxref=Genbank:WP_016190458.1;Name=WP_016190458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013027244.1;locus_tag=LU631_RS05670;product=DUF1190 family protein;protein_id=WP_016190458.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1100614 1102080 . - . ID=gene-LU631_RS05675;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=LU631_RS05675;old_locus_tag=LU631_05675 NZ_CP089940.1 Protein Homology CDS 1100614 1102080 . - 0 ID=cds-WP_016190457.1;Parent=gene-LU631_RS05675;Dbxref=Genbank:WP_016190457.1;Name=WP_016190457.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155227.1;locus_tag=LU631_RS05675;product=outer membrane channel protein TolC;protein_id=WP_016190457.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1102298 1102932 . + . ID=gene-LU631_RS05680;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=pseudogene;locus_tag=LU631_RS05680;old_locus_tag=LU631_05680;pseudo=true NZ_CP089940.1 Protein Homology CDS 1102298 1102932 . + 0 ID=cds-LU631_RS05680;Parent=gene-LU631_RS05680;Note=frameshifted;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440190.1;locus_tag=LU631_RS05680;product=ADP-ribose diphosphatase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1102929 1103348 . + . ID=gene-LU631_RS05685;Name=LU631_RS05685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05685;old_locus_tag=LU631_05685;pseudo=true NZ_CP089940.1 Protein Homology CDS 1102929 1103348 . + 0 ID=cds-LU631_RS05685;Parent=gene-LU631_RS05685;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948286.1;locus_tag=LU631_RS05685;product=DUF1249 family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1103397 1104224 . + . ID=gene-LU631_RS05690;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=LU631_RS05690;old_locus_tag=LU631_05690 NZ_CP089940.1 Protein Homology CDS 1103397 1104224 . + 0 ID=cds-WP_016190453.1;Parent=gene-LU631_RS05690;Dbxref=Genbank:WP_016190453.1;Name=WP_016190453.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005180337.1;locus_tag=LU631_RS05690;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_016190453.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1104228 1104809 . + . ID=gene-LU631_RS05695;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=LU631_RS05695;old_locus_tag=LU631_05695 NZ_CP089940.1 Protein Homology CDS 1104228 1104809 . + 0 ID=cds-WP_016190452.1;Parent=gene-LU631_RS05695;Dbxref=Genbank:WP_016190452.1;Name=WP_016190452.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203870.1;locus_tag=LU631_RS05695;product=esterase YqiA;protein_id=WP_016190452.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1104863 1106758 . + . ID=gene-LU631_RS05700;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=LU631_RS05700;old_locus_tag=LU631_05700 NZ_CP089940.1 Protein Homology CDS 1104863 1106758 . + 0 ID=cds-WP_016190451.1;Parent=gene-LU631_RS05700;Dbxref=Genbank:WP_016190451.1;Name=WP_016190451.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257886.1;locus_tag=LU631_RS05700;product=DNA topoisomerase IV subunit B;protein_id=WP_016190451.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1107018 1107563 . - . ID=gene-LU631_RS05705;Name=LU631_RS05705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05705;old_locus_tag=LU631_05705;pseudo=true NZ_CP089940.1 Protein Homology CDS 1107018 1107563 . - 0 ID=cds-LU631_RS05705;Parent=gene-LU631_RS05705;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013317304.1;locus_tag=LU631_RS05705;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1107660 1108162 . + . ID=gene-LU631_RS05710;Name=LU631_RS05710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05710;old_locus_tag=LU631_05710;pseudo=true NZ_CP089940.1 Protein Homology CDS 1107660 1108162 . + 0 ID=cds-LU631_RS05710;Parent=gene-LU631_RS05710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378409.1;locus_tag=LU631_RS05710;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1108192 1109101 . - . ID=gene-LU631_RS05715;Name=LU631_RS05715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05715;old_locus_tag=LU631_05715;pseudo=true NZ_CP089940.1 Protein Homology CDS 1108192 1109101 . - 0 ID=cds-LU631_RS05715;Parent=gene-LU631_RS05715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443041.1;locus_tag=LU631_RS05715;product=nucleoside hydrolase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1109142 1109423 . - . ID=gene-LU631_RS05720;Name=LU631_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05720;old_locus_tag=LU631_05720 NZ_CP089940.1 Protein Homology CDS 1109142 1109423 . - 0 ID=cds-WP_016190448.1;Parent=gene-LU631_RS05720;Dbxref=Genbank:WP_016190448.1;Name=WP_016190448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666813.1;locus_tag=LU631_RS05720;product=antibiotic biosynthesis monooxygenase;protein_id=WP_016190448.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1110303 1111073 . + . ID=gene-LU631_RS05725;Name=LU631_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05725;old_locus_tag=LU631_05725 NZ_CP089940.1 Protein Homology CDS 1110303 1111073 . + 0 ID=cds-WP_046372355.1;Parent=gene-LU631_RS05725;Dbxref=Genbank:WP_046372355.1;Name=WP_046372355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019104842.1;locus_tag=LU631_RS05725;product=transporter substrate-binding domain-containing protein;protein_id=WP_046372355.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1111210 1113483 . + . ID=gene-LU631_RS05730;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=LU631_RS05730;old_locus_tag=LU631_05730 NZ_CP089940.1 Protein Homology CDS 1111210 1113483 . + 0 ID=cds-WP_016190446.1;Parent=gene-LU631_RS05730;Dbxref=Genbank:WP_016190446.1;Name=WP_016190446.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010249025.1;locus_tag=LU631_RS05730;product=DNA topoisomerase IV subunit A;protein_id=WP_016190446.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1113571 1114308 . + . ID=gene-LU631_RS05735;Name=LU631_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05735;old_locus_tag=LU631_05735 NZ_CP089940.1 Protein Homology CDS 1113571 1114308 . + 0 ID=cds-WP_016190445.1;Parent=gene-LU631_RS05735;Dbxref=Genbank:WP_016190445.1;Name=WP_016190445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594628.1;locus_tag=LU631_RS05735;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_016190445.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1114400 1115815 . + . ID=gene-LU631_RS05740;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=LU631_RS05740;old_locus_tag=LU631_05740 NZ_CP089940.1 Protein Homology CDS 1114400 1115815 . + 0 ID=cds-WP_016190444.1;Parent=gene-LU631_RS05740;Dbxref=Genbank:WP_016190444.1;Name=WP_016190444.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006328158.1;locus_tag=LU631_RS05740;product=cell division protein FtsP;protein_id=WP_016190444.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1116195 1116464 . - . ID=gene-LU631_RS05745;Name=LU631_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05745;old_locus_tag=LU631_05745 NZ_CP089940.1 Protein Homology CDS 1116195 1116464 . - 0 ID=cds-WP_016190443.1;Parent=gene-LU631_RS05745;Dbxref=Genbank:WP_016190443.1;Name=WP_016190443.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018986.2;locus_tag=LU631_RS05745;product=DUF1471 domain-containing protein;protein_id=WP_016190443.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1116942 1117477 . + . ID=gene-LU631_RS05750;Name=LU631_RS05750;end_range=1117477,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05750;old_locus_tag=LU631_05750;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1116942 1117477 . + 0 ID=cds-LU631_RS05750;Parent=gene-LU631_RS05750;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1117477,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611197.1;locus_tag=LU631_RS05750;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1117483 1118631 . + . ID=gene-LU631_RS05755;Name=LU631_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05755;old_locus_tag=LU631_05755 NZ_CP089940.1 Protein Homology CDS 1117483 1118631 . + 0 ID=cds-WP_016190440.1;Parent=gene-LU631_RS05755;Dbxref=Genbank:WP_016190440.1;Name=WP_016190440.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025563.2;locus_tag=LU631_RS05755;product=RICIN domain-containing protein;protein_id=WP_016190440.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1118987 1119643 . - . ID=gene-LU631_RS05760;Name=LU631_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05760;old_locus_tag=LU631_05760 NZ_CP089940.1 Protein Homology CDS 1118987 1119643 . - 0 ID=cds-WP_016190438.1;Parent=gene-LU631_RS05760;Dbxref=Genbank:WP_016190438.1;Name=WP_016190438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203841.1;locus_tag=LU631_RS05760;product=DedA family protein;protein_id=WP_016190438.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1119740 1120939 . - . ID=gene-LU631_RS05765;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=LU631_RS05765;old_locus_tag=LU631_05765 NZ_CP089940.1 Protein Homology CDS 1119740 1120939 . - 0 ID=cds-WP_016190437.1;Parent=gene-LU631_RS05765;Dbxref=Genbank:WP_016190437.1;Name=WP_016190437.1;Ontology_term=GO:0006520,GO:0019346,GO:0004121,GO:0030170;gbkey=CDS;gene=metC;go_function=cystathionine beta-lyase activity|0004121||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203840.1;locus_tag=LU631_RS05765;product=cystathionine beta-lyase;protein_id=WP_016190437.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1121173 1121907 . + . ID=gene-LU631_RS05770;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=LU631_RS05770;old_locus_tag=LU631_05770 NZ_CP089940.1 Protein Homology CDS 1121173 1121907 . + 0 ID=cds-WP_016190436.1;Parent=gene-LU631_RS05770;Dbxref=Genbank:WP_016190436.1;Name=WP_016190436.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=LU631_RS05770;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_016190436.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1121913 1122335 . + . ID=gene-LU631_RS05775;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=LU631_RS05775;old_locus_tag=LU631_05775 NZ_CP089940.1 Protein Homology CDS 1121913 1122335 . + 0 ID=cds-WP_016190435.1;Parent=gene-LU631_RS05775;Dbxref=Genbank:WP_016190435.1;Name=WP_016190435.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009127738.1;locus_tag=LU631_RS05775;product=TonB system transport protein ExbD;protein_id=WP_016190435.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1122599 1123912 . - . ID=gene-LU631_RS05780;Name=LU631_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05780;old_locus_tag=LU631_05780 NZ_CP089940.1 Protein Homology CDS 1122599 1123912 . - 0 ID=cds-WP_016190434.1;Parent=gene-LU631_RS05780;Dbxref=Genbank:WP_016190434.1;Name=WP_016190434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009127743.1;locus_tag=LU631_RS05780;product=MFS transporter;protein_id=WP_016190434.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1124223 1125092 . + . ID=gene-LU631_RS05785;Name=LU631_RS05785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05785;old_locus_tag=LU631_05785;pseudo=true NZ_CP089940.1 Protein Homology CDS 1124223 1125092 . + 0 ID=cds-LU631_RS05785;Parent=gene-LU631_RS05785;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455261.1;locus_tag=LU631_RS05785;product=SDR family oxidoreductase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1125213 1126604 . + . ID=gene-LU631_RS05790;Name=LU631_RS05790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05790;old_locus_tag=LU631_05790;pseudo=true NZ_CP089940.1 Protein Homology CDS 1125213 1126604 . + 0 ID=cds-LU631_RS05790;Parent=gene-LU631_RS05790;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010249003.1;locus_tag=LU631_RS05790;product=PLP-dependent aminotransferase family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1126578 1127057 . - . ID=gene-LU631_RS05795;Name=LU631_RS05795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05795;old_locus_tag=LU631_05795;pseudo=true NZ_CP089940.1 Protein Homology CDS 1126578 1127057 . - 0 ID=cds-LU631_RS05795;Parent=gene-LU631_RS05795;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022234.2;locus_tag=LU631_RS05795;product=YlaC family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1127265 1128254 . + . ID=gene-LU631_RS05800;Name=LU631_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05800;old_locus_tag=LU631_05800 NZ_CP089940.1 GeneMarkS-2+ CDS 1127265 1128254 . + 0 ID=cds-WP_016190430.1;Parent=gene-LU631_RS05800;Dbxref=Genbank:WP_016190430.1;Name=WP_016190430.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS05800;product=hypothetical protein;protein_id=WP_016190430.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1129179 1130387 . - . ID=gene-LU631_RS05805;Name=LU631_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05805;old_locus_tag=LU631_05805 NZ_CP089940.1 Protein Homology CDS 1129179 1130387 . - 0 ID=cds-WP_046371917.1;Parent=gene-LU631_RS05805;Dbxref=Genbank:WP_046371917.1;Name=WP_046371917.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS05805;product=IS256 family transposase;protein_id=WP_046371917.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1131021 1132058 . + . ID=gene-LU631_RS05810;Name=LU631_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05810;old_locus_tag=LU631_05810 NZ_CP089940.1 Protein Homology CDS 1131021 1132058 . + 0 ID=cds-WP_016190429.1;Parent=gene-LU631_RS05810;Dbxref=Genbank:WP_016190429.1;Name=WP_016190429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716636.1;locus_tag=LU631_RS05810;product=sigma-54 dependent transcriptional regulator;protein_id=WP_016190429.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1132133 1132309 . - . ID=gene-LU631_RS05815;Name=LU631_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05815;old_locus_tag=LU631_05815 NZ_CP089940.1 GeneMarkS-2+ CDS 1132133 1132309 . - 0 ID=cds-WP_157275220.1;Parent=gene-LU631_RS05815;Dbxref=Genbank:WP_157275220.1;Name=WP_157275220.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS05815;product=hypothetical protein;protein_id=WP_157275220.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1132388 1132723 . - . ID=gene-LU631_RS05820;Name=LU631_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05820;old_locus_tag=LU631_05820 NZ_CP089940.1 GeneMarkS-2+ CDS 1132388 1132723 . - 0 ID=cds-WP_016190428.1;Parent=gene-LU631_RS05820;Dbxref=Genbank:WP_016190428.1;Name=WP_016190428.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS05820;product=hypothetical protein;protein_id=WP_016190428.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1132781 1133212 . - . ID=gene-LU631_RS05825;Name=LU631_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05825;old_locus_tag=LU631_05825 NZ_CP089940.1 GeneMarkS-2+ CDS 1132781 1133212 . - 0 ID=cds-WP_016190427.1;Parent=gene-LU631_RS05825;Dbxref=Genbank:WP_016190427.1;Name=WP_016190427.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS05825;product=hypothetical protein;protein_id=WP_016190427.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1133157 1134173 . - . ID=gene-LU631_RS05830;Name=LU631_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05830;old_locus_tag=LU631_05830 NZ_CP089940.1 Protein Homology CDS 1133157 1134173 . - 0 ID=cds-WP_051124339.1;Parent=gene-LU631_RS05830;Dbxref=Genbank:WP_051124339.1;Name=WP_051124339.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012698.2;locus_tag=LU631_RS05830;product=transcriptional regulator;protein_id=WP_051124339.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1135032 1135499 . + . ID=gene-LU631_RS05835;Name=LU631_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05835;old_locus_tag=LU631_05835 NZ_CP089940.1 GeneMarkS-2+ CDS 1135032 1135499 . + 0 ID=cds-WP_152664254.1;Parent=gene-LU631_RS05835;Dbxref=Genbank:WP_152664254.1;Name=WP_152664254.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS05835;product=hypothetical protein;protein_id=WP_152664254.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1135499 1136197 . + . ID=gene-LU631_RS05840;Name=LU631_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05840;old_locus_tag=LU631_05840 NZ_CP089940.1 Protein Homology CDS 1135499 1136197 . + 0 ID=cds-WP_016190424.1;Parent=gene-LU631_RS05840;Dbxref=Genbank:WP_016190424.1;Name=WP_016190424.1;Ontology_term=GO:0006352,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389990.1;locus_tag=LU631_RS05840;product=FliA/WhiG family RNA polymerase sigma factor;protein_id=WP_016190424.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1136599 1136958 . + . ID=gene-LU631_RS05845;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS05845;old_locus_tag=LU631_05845 NZ_CP089940.1 Protein Homology CDS 1136599 1136958 . + 0 ID=cds-WP_233482022.1;Parent=gene-LU631_RS05845;Dbxref=Genbank:WP_233482022.1;Name=WP_233482022.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU631_RS05845;product=IS200/IS605 family transposase;protein_id=WP_233482022.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1137228 1137776 . + . ID=gene-LU631_RS05850;Name=LU631_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05850;old_locus_tag=LU631_05850 NZ_CP089940.1 Protein Homology CDS 1137228 1137776 . + 0 ID=cds-WP_233481992.1;Parent=gene-LU631_RS05850;Dbxref=Genbank:WP_233481992.1;Name=WP_233481992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203828.1;locus_tag=LU631_RS05850;product=hypothetical protein;protein_id=WP_233481992.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1137958 1139363 . + . ID=gene-LU631_RS05855;Name=LU631_RS05855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05855;old_locus_tag=LU631_05855;pseudo=true NZ_CP089940.1 Protein Homology CDS 1137958 1139363 . + 0 ID=cds-LU631_RS05855;Parent=gene-LU631_RS05855;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203827.1;locus_tag=LU631_RS05855;product=circularly permuted type 2 ATP-grasp protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1139357 1140062 . + . ID=gene-LU631_RS05860;Name=LU631_RS05860;end_range=1140062,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05860;old_locus_tag=LU631_05860;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1139357 1140062 . + 0 ID=cds-LU631_RS05860;Parent=gene-LU631_RS05860;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1140062,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080058.1;locus_tag=LU631_RS05860;partial=true;product=alpha-E domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1140800 1142953 . + . ID=gene-LU631_RS05865;Name=LU631_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05865;old_locus_tag=LU631_05865 NZ_CP089940.1 Protein Homology CDS 1140800 1142953 . + 0 ID=cds-WP_016190421.1;Parent=gene-LU631_RS05865;Dbxref=Genbank:WP_016190421.1;Name=WP_016190421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=LU631_RS05865;product=carbon starvation protein A;protein_id=WP_016190421.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1143000 1143203 . + . ID=gene-LU631_RS05870;Name=LU631_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05870;old_locus_tag=LU631_05870 NZ_CP089940.1 Protein Homology CDS 1143000 1143203 . + 0 ID=cds-WP_016190420.1;Parent=gene-LU631_RS05870;Dbxref=Genbank:WP_016190420.1;Name=WP_016190420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817000.1;locus_tag=LU631_RS05870;product=CstA-like transporter-associated (seleno)protein;protein_id=WP_016190420.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1143342 1144056 . - . ID=gene-LU631_RS05875;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=pseudogene;gene_synonym=yehT;locus_tag=LU631_RS05875;old_locus_tag=LU631_05875;pseudo=true NZ_CP089940.1 Protein Homology CDS 1143342 1144056 . - 0 ID=cds-LU631_RS05875;Parent=gene-LU631_RS05875;Note=frameshifted;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016153690.1;locus_tag=LU631_RS05875;product=two-component system response regulator BtsR;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1144050 1145735 . - . ID=gene-LU631_RS05880;Name=LU631_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05880;old_locus_tag=LU631_05880 NZ_CP089940.1 Protein Homology CDS 1144050 1145735 . - 0 ID=cds-WP_016190417.1;Parent=gene-LU631_RS05880;Dbxref=Genbank:WP_016190417.1;Name=WP_016190417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371204.1;locus_tag=LU631_RS05880;product=sensor histidine kinase;protein_id=WP_016190417.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1146421 1147462 . - . ID=gene-LU631_RS05885;Name=LU631_RS05885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05885;old_locus_tag=LU631_05885;pseudo=true NZ_CP089940.1 Protein Homology CDS 1146421 1147462 . - 0 ID=cds-LU631_RS05885;Parent=gene-LU631_RS05885;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS05885;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1147541 1148339 . - . ID=gene-LU631_RS05890;Name=LU631_RS05890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05890;old_locus_tag=LU631_05890;pseudo=true NZ_CP089940.1 Protein Homology CDS 1147541 1148339 . - 0 ID=cds-LU631_RS05890;Parent=gene-LU631_RS05890;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS05890;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1148421 1148513 . + . ID=gene-LU631_RS05895;Name=LU631_RS05895;end_range=1148513,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05895;old_locus_tag=LU631_05895;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1148421 1148513 . + 0 ID=cds-LU631_RS05895;Parent=gene-LU631_RS05895;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1148513,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012228774.1;locus_tag=LU631_RS05895;partial=true;product=DNA-binding protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1148516 1148674 . + . ID=gene-LU631_RS05900;Name=LU631_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05900;old_locus_tag=LU631_05900 NZ_CP089940.1 GeneMarkS-2+ CDS 1148516 1148674 . + 0 ID=cds-WP_157275219.1;Parent=gene-LU631_RS05900;Dbxref=Genbank:WP_157275219.1;Name=WP_157275219.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS05900;product=hypothetical protein;protein_id=WP_157275219.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1149542 1150819 . + . ID=gene-LU631_RS05905;Name=LU631_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05905;old_locus_tag=LU631_05905 NZ_CP089940.1 Protein Homology CDS 1149542 1150819 . + 0 ID=cds-WP_016190416.1;Parent=gene-LU631_RS05905;Dbxref=Genbank:WP_016190416.1;Name=WP_016190416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072200.1;locus_tag=LU631_RS05905;product=phosphatase PAP2 family protein;protein_id=WP_016190416.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1150995 1151207 . + . ID=gene-LU631_RS05910;Name=LU631_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05910;old_locus_tag=LU631_05910 NZ_CP089940.1 GeneMarkS-2+ CDS 1150995 1151207 . + 0 ID=cds-WP_232426832.1;Parent=gene-LU631_RS05910;Dbxref=Genbank:WP_232426832.1;Name=WP_232426832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS05910;product=hypothetical protein;protein_id=WP_232426832.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1151355 1151585 . + . ID=gene-LU631_RS05915;Name=LU631_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05915;old_locus_tag=LU631_05915 NZ_CP089940.1 Protein Homology CDS 1151355 1151585 . + 0 ID=cds-WP_016190414.1;Parent=gene-LU631_RS05915;Dbxref=Genbank:WP_016190414.1;Name=WP_016190414.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025054.2;locus_tag=LU631_RS05915;product=GNAT family N-acetyltransferase;protein_id=WP_016190414.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1152099 1152608 . - . ID=gene-LU631_RS05920;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=LU631_RS05920;old_locus_tag=LU631_05920 NZ_CP089940.1 Protein Homology CDS 1152099 1152608 . - 0 ID=cds-WP_016190413.1;Parent=gene-LU631_RS05920;Dbxref=Genbank:WP_016190413.1;Name=WP_016190413.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=cellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203806.1;locus_tag=LU631_RS05920;product=non-heme ferritin;protein_id=WP_016190413.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1153094 1153396 . - . ID=gene-LU631_RS05925;Name=LU631_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05925;old_locus_tag=LU631_05925 NZ_CP089940.1 GeneMarkS-2+ CDS 1153094 1153396 . - 0 ID=cds-WP_016190412.1;Parent=gene-LU631_RS05925;Dbxref=Genbank:WP_016190412.1;Name=WP_016190412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS05925;product=hypothetical protein;protein_id=WP_016190412.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1153397 1153528 . - . ID=gene-LU631_RS26015;Name=LU631_RS26015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26015 NZ_CP089940.1 GeneMarkS-2+ CDS 1153397 1153528 . - 0 ID=cds-WP_256371742.1;Parent=gene-LU631_RS26015;Dbxref=Genbank:WP_256371742.1;Name=WP_256371742.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS26015;product=hypothetical protein;protein_id=WP_256371742.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1153529 1155214 . - . ID=gene-LU631_RS05930;Name=LU631_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05930;old_locus_tag=LU631_05930 NZ_CP089940.1 Protein Homology CDS 1153529 1155214 . - 0 ID=cds-WP_232426846.1;Parent=gene-LU631_RS05930;Dbxref=Genbank:WP_232426846.1;Name=WP_232426846.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203793.1;locus_tag=LU631_RS05930;product=methyl-accepting chemotaxis protein;protein_id=WP_232426846.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1155523 1156746 . - . ID=gene-LU631_RS05935;Name=LU631_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05935;old_locus_tag=LU631_05935 NZ_CP089940.1 Protein Homology CDS 1155523 1156746 . - 0 ID=cds-WP_233481993.1;Parent=gene-LU631_RS05935;Dbxref=Genbank:WP_233481993.1;Name=WP_233481993.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU631_RS05935;product=IS91 family transposase;protein_id=WP_233481993.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1156985 1158055 . - . ID=gene-LU631_RS05940;Name=LU631_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05940;old_locus_tag=LU631_05940 NZ_CP089940.1 Protein Homology CDS 1156985 1158055 . - 0 ID=cds-WP_233481994.1;Parent=gene-LU631_RS05940;Dbxref=Genbank:WP_233481994.1;Name=WP_233481994.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU631_RS05940;product=IS91 family transposase;protein_id=WP_233481994.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1157991 1158200 . - . ID=gene-LU631_RS05945;Name=LU631_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05945;old_locus_tag=LU631_05945 NZ_CP089940.1 GeneMarkS-2+ CDS 1157991 1158200 . - 0 ID=cds-WP_046372206.1;Parent=gene-LU631_RS05945;Dbxref=Genbank:WP_046372206.1;Name=WP_046372206.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS05945;product=hypothetical protein;protein_id=WP_046372206.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1158209 1158544 . - . ID=gene-LU631_RS05950;Name=LU631_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05950;old_locus_tag=LU631_05950 NZ_CP089940.1 GeneMarkS-2+ CDS 1158209 1158544 . - 0 ID=cds-WP_052734695.1-4;Parent=gene-LU631_RS05950;Dbxref=Genbank:WP_052734695.1;Name=WP_052734695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS05950;product=hypothetical protein;protein_id=WP_052734695.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1159105 1159512 . - . ID=gene-LU631_RS05955;Name=LU631_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05955;old_locus_tag=LU631_05955 NZ_CP089940.1 Protein Homology CDS 1159105 1159512 . - 0 ID=cds-WP_016190409.1;Parent=gene-LU631_RS05955;Dbxref=Genbank:WP_016190409.1;Name=WP_016190409.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012955.2;locus_tag=LU631_RS05955;product=MBL fold metallo-hydrolase;protein_id=WP_016190409.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1159509 1159643 . - . ID=gene-LU631_RS26020;Name=LU631_RS26020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26020 NZ_CP089940.1 GeneMarkS-2+ CDS 1159509 1159643 . - 0 ID=cds-WP_256371743.1;Parent=gene-LU631_RS26020;Dbxref=Genbank:WP_256371743.1;Name=WP_256371743.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS26020;product=hypothetical protein;protein_id=WP_256371743.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1159676 1159956 . - . ID=gene-LU631_RS05960;Name=LU631_RS05960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05960;old_locus_tag=LU631_05960;pseudo=true NZ_CP089940.1 Protein Homology CDS 1159676 1159956 . - 0 ID=cds-LU631_RS05960;Parent=gene-LU631_RS05960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004571230.1;locus_tag=LU631_RS05960;product=SelT/SelW/SelH family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1160214 1162607 . + . ID=gene-LU631_RS05965;Name=LU631_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05965;old_locus_tag=LU631_05965 NZ_CP089940.1 Protein Homology CDS 1160214 1162607 . + 0 ID=cds-WP_016190407.1;Parent=gene-LU631_RS05965;Dbxref=Genbank:WP_016190407.1;Name=WP_016190407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203780.1;locus_tag=LU631_RS05965;product=TonB-dependent receptor;protein_id=WP_016190407.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1162680 1163711 . + . ID=gene-LU631_RS05970;Name=LU631_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05970;old_locus_tag=LU631_05970 NZ_CP089940.1 Protein Homology CDS 1162680 1163711 . + 0 ID=cds-WP_040465473.1;Parent=gene-LU631_RS05970;Dbxref=Genbank:WP_040465473.1;Name=WP_040465473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802153.1;locus_tag=LU631_RS05970;product=hemin-degrading factor;protein_id=WP_040465473.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1163708 1164526 . + . ID=gene-LU631_RS05975;Name=LU631_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05975;old_locus_tag=LU631_05975 NZ_CP089940.1 Protein Homology CDS 1163708 1164526 . + 0 ID=cds-WP_016190405.1;Parent=gene-LU631_RS05975;Dbxref=Genbank:WP_016190405.1;Name=WP_016190405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203778.1;locus_tag=LU631_RS05975;product=hemin ABC transporter substrate-binding protein;protein_id=WP_016190405.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1164523 1165521 . + . ID=gene-LU631_RS05980;Name=LU631_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05980;old_locus_tag=LU631_05980 NZ_CP089940.1 Protein Homology CDS 1164523 1165521 . + 0 ID=cds-WP_016190404.1;Parent=gene-LU631_RS05980;Dbxref=Genbank:WP_016190404.1;Name=WP_016190404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441561.1;locus_tag=LU631_RS05980;product=iron ABC transporter permease;protein_id=WP_016190404.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1165518 1166297 . + . ID=gene-LU631_RS05985;Name=LU631_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS05985;old_locus_tag=LU631_05985 NZ_CP089940.1 Protein Homology CDS 1165518 1166297 . + 0 ID=cds-WP_016190403.1;Parent=gene-LU631_RS05985;Dbxref=Genbank:WP_016190403.1;Name=WP_016190403.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203776.1;locus_tag=LU631_RS05985;product=heme ABC transporter ATP-binding protein;protein_id=WP_016190403.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1166332 1168227 . - . ID=gene-LU631_RS05990;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=LU631_RS05990;old_locus_tag=LU631_05990 NZ_CP089940.1 Protein Homology CDS 1166332 1168227 . - 0 ID=cds-WP_016190402.1;Parent=gene-LU631_RS05990;Dbxref=Genbank:WP_016190402.1;Name=WP_016190402.1;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203774.1;locus_tag=LU631_RS05990;product=penicillin-binding protein 2;protein_id=WP_016190402.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1168501 1169209 . + . ID=gene-LU631_RS05995;Name=LU631_RS05995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS05995;old_locus_tag=LU631_05995;pseudo=true NZ_CP089940.1 Protein Homology CDS 1168501 1169209 . + 0 ID=cds-LU631_RS05995;Parent=gene-LU631_RS05995;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU631_RS05995;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1169257 1169523 . + . ID=gene-LU631_RS06000;Name=LU631_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06000;old_locus_tag=LU631_06000 NZ_CP089940.1 GeneMarkS-2+ CDS 1169257 1169523 . + 0 ID=cds-WP_016190399.1;Parent=gene-LU631_RS06000;Dbxref=Genbank:WP_016190399.1;Name=WP_016190399.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06000;product=lactoylglutathione lyase family protein;protein_id=WP_016190399.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1169516 1169860 . + . ID=gene-LU631_RS06005;Name=LU631_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06005;old_locus_tag=LU631_06005 NZ_CP089940.1 GeneMarkS-2+ CDS 1169516 1169860 . + 0 ID=cds-WP_051124338.1;Parent=gene-LU631_RS06005;Dbxref=Genbank:WP_051124338.1;Name=WP_051124338.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06005;product=hypothetical protein;protein_id=WP_051124338.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1169787 1170263 . + . ID=gene-LU631_RS06010;Name=LU631_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06010;old_locus_tag=LU631_06010 NZ_CP089940.1 GeneMarkS-2+ CDS 1169787 1170263 . + 0 ID=cds-WP_152664256.1;Parent=gene-LU631_RS06010;Dbxref=Genbank:WP_152664256.1;Name=WP_152664256.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06010;product=hypothetical protein;protein_id=WP_152664256.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1170237 1170740 . - . ID=gene-LU631_RS06015;Name=LU631_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06015;old_locus_tag=LU631_06015 NZ_CP089940.1 Protein Homology CDS 1170237 1170740 . - 0 ID=cds-WP_016190398.1;Parent=gene-LU631_RS06015;Dbxref=Genbank:WP_016190398.1;Name=WP_016190398.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012422.2;locus_tag=LU631_RS06015;product=helix-turn-helix transcriptional regulator;protein_id=WP_016190398.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1170938 1172050 . - . ID=gene-LU631_RS06020;Name=LU631_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06020;old_locus_tag=LU631_06020 NZ_CP089940.1 Protein Homology CDS 1170938 1172050 . - 0 ID=cds-WP_016190397.1;Parent=gene-LU631_RS06020;Dbxref=Genbank:WP_016190397.1;Name=WP_016190397.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012635.2;locus_tag=LU631_RS06020;product=fimbrial protein;protein_id=WP_016190397.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1172090 1174666 . - . ID=gene-LU631_RS06025;Name=LU631_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06025;old_locus_tag=LU631_06025 NZ_CP089940.1 Protein Homology CDS 1172090 1174666 . - 0 ID=cds-WP_016190396.1;Parent=gene-LU631_RS06025;Dbxref=Genbank:WP_016190396.1;Name=WP_016190396.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012786.2;locus_tag=LU631_RS06025;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_016190396.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1174723 1175421 . - . ID=gene-LU631_RS06030;Name=LU631_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06030;old_locus_tag=LU631_06030 NZ_CP089940.1 Protein Homology CDS 1174723 1175421 . - 0 ID=cds-WP_016190395.1;Parent=gene-LU631_RS06030;Dbxref=Genbank:WP_016190395.1;Name=WP_016190395.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008106121.1;locus_tag=LU631_RS06030;product=fimbria/pilus periplasmic chaperone;protein_id=WP_016190395.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1175497 1176033 . - . ID=gene-LU631_RS06035;Name=LU631_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06035;old_locus_tag=LU631_06035 NZ_CP089940.1 Protein Homology CDS 1175497 1176033 . - 0 ID=cds-WP_016190394.1;Parent=gene-LU631_RS06035;Dbxref=Genbank:WP_016190394.1;Name=WP_016190394.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012635.2;locus_tag=LU631_RS06035;product=fimbrial protein;protein_id=WP_016190394.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1176134 1176541 . - . ID=gene-LU631_RS06040;Name=LU631_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06040;old_locus_tag=LU631_06040 NZ_CP089940.1 GeneMarkS-2+ CDS 1176134 1176541 . - 0 ID=cds-WP_016190393.1;Parent=gene-LU631_RS06040;Dbxref=Genbank:WP_016190393.1;Name=WP_016190393.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06040;product=hypothetical protein;protein_id=WP_016190393.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1178292 1178657 . - . ID=gene-LU631_RS06045;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS06045;old_locus_tag=LU631_06045 NZ_CP089940.1 Protein Homology CDS 1178292 1178657 . - 0 ID=cds-WP_087949680.1;Parent=gene-LU631_RS06045;Dbxref=Genbank:WP_087949680.1;Name=WP_087949680.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041205574.1;locus_tag=LU631_RS06045;product=IS200/IS605 family transposase;protein_id=WP_087949680.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1178776 1179938 . + . ID=gene-LU631_RS06050;Name=LU631_RS06050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06050;old_locus_tag=LU631_06050;pseudo=true NZ_CP089940.1 Protein Homology CDS 1178776 1179938 . + 0 ID=cds-LU631_RS06050;Parent=gene-LU631_RS06050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000942659.1;locus_tag=LU631_RS06050;product=RNA-guided endonuclease TnpB family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1180828 1181610 . + . ID=gene-LU631_RS06055;Name=LU631_RS06055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06055;old_locus_tag=LU631_06055;pseudo=true NZ_CP089940.1 Protein Homology CDS 1180828 1181610 . + 0 ID=cds-LU631_RS06055;Parent=gene-LU631_RS06055;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS06055;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1182658 1182842 . - . ID=gene-LU631_RS06060;Name=LU631_RS06060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06060;old_locus_tag=LU631_06060;partial=true;pseudo=true;start_range=.,1182658 NZ_CP089940.1 Protein Homology CDS 1182658 1182842 . - 0 ID=cds-LU631_RS06060;Parent=gene-LU631_RS06060;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011787828.1;locus_tag=LU631_RS06060;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,1182658;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1182956 1183063 . - . ID=gene-LU631_RS06065;Name=LU631_RS06065;end_range=1183063,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06065;old_locus_tag=LU631_06065;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1182956 1183063 . - 0 ID=cds-LU631_RS06065;Parent=gene-LU631_RS06065;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1183063,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158064.1;locus_tag=LU631_RS06065;partial=true;product=DUF4113 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1183059 1183190 . - . ID=gene-LU631_RS06070;Name=LU631_RS06070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06070;old_locus_tag=LU631_06070;partial=true;pseudo=true;start_range=.,1183059 NZ_CP089940.1 Protein Homology CDS 1183059 1183190 . - 0 ID=cds-LU631_RS06070;Parent=gene-LU631_RS06070;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000905001.1;locus_tag=LU631_RS06070;partial=true;product=recombinase family protein;pseudo=true;start_range=.,1183059;transl_table=11 NZ_CP089940.1 RefSeq gene 1183944 1184333 . + . ID=gene-LU631_RS06075;Name=LU631_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06075;old_locus_tag=LU631_06075 NZ_CP089940.1 Protein Homology CDS 1183944 1184333 . + 0 ID=cds-WP_016190389.1;Parent=gene-LU631_RS06075;Dbxref=Genbank:WP_016190389.1;Name=WP_016190389.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017719.2;locus_tag=LU631_RS06075;product=type III secretion system chaperone;protein_id=WP_016190389.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1184344 1185468 . + . ID=gene-LU631_RS06080;Name=LU631_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06080;old_locus_tag=LU631_06080 NZ_CP089940.1 Protein Homology CDS 1184344 1185468 . + 0 ID=cds-WP_016190388.1;Parent=gene-LU631_RS06080;Dbxref=Genbank:WP_016190388.1;Name=WP_016190388.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037672.2;locus_tag=LU631_RS06080;product=T3SS effector HopA1 family protein;protein_id=WP_016190388.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1185653 1186069 . - . ID=gene-LU631_RS06085;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS06085;old_locus_tag=LU631_06085 NZ_CP089940.1 Protein Homology CDS 1185653 1186069 . - 0 ID=cds-WP_016190387.1;Parent=gene-LU631_RS06085;Dbxref=Genbank:WP_016190387.1;Name=WP_016190387.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192838.1;locus_tag=LU631_RS06085;product=IS200/IS605 family transposase;protein_id=WP_016190387.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1186152 1186859 . + . ID=gene-LU631_RS06090;Name=LU631_RS06090;end_range=1186859,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06090;old_locus_tag=LU631_06090;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1186152 1186859 . + 0 ID=cds-LU631_RS06090;Parent=gene-LU631_RS06090;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1186859,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040570.1;locus_tag=LU631_RS06090;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1186896 1187576 . + . ID=gene-LU631_RS06095;Name=LU631_RS06095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06095;old_locus_tag=LU631_06095;partial=true;pseudo=true;start_range=.,1186896 NZ_CP089940.1 Protein Homology CDS 1186896 1187576 . + 0 ID=cds-LU631_RS06095;Parent=gene-LU631_RS06095;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343760.1;locus_tag=LU631_RS06095;partial=true;product=transposase;pseudo=true;start_range=.,1186896;transl_table=11 NZ_CP089940.1 RefSeq gene 1187863 1190460 . + . ID=gene-LU631_RS06100;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=LU631_RS06100;old_locus_tag=LU631_06100 NZ_CP089940.1 Protein Homology CDS 1187863 1190460 . + 0 ID=cds-WP_016190383.1;Parent=gene-LU631_RS06100;Dbxref=Genbank:WP_016190383.1;Name=WP_016190383.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=LU631_RS06100;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_016190383.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1191061 1191513 . - . ID=gene-LU631_RS06105;Name=LU631_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06105;old_locus_tag=LU631_06105 NZ_CP089940.1 GeneMarkS-2+ CDS 1191061 1191513 . - 0 ID=cds-WP_016190382.1;Parent=gene-LU631_RS06105;Dbxref=Genbank:WP_016190382.1;Name=WP_016190382.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06105;product=hypothetical protein;protein_id=WP_016190382.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1191967 1192663 . + . ID=gene-LU631_RS06110;Name=LU631_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06110;old_locus_tag=LU631_06110 NZ_CP089940.1 Protein Homology CDS 1191967 1192220 . + 0 ID=cds-WP_233481995.1;Parent=gene-LU631_RS06110;Dbxref=Genbank:WP_233481995.1;Name=WP_233481995.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS06110;product=IS1 family transposase;protein_id=WP_233481995.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 1192219 1192663 . + 1 ID=cds-WP_233481995.1;Parent=gene-LU631_RS06110;Dbxref=Genbank:WP_233481995.1;Name=WP_233481995.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS06110;product=IS1 family transposase;protein_id=WP_233481995.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1192895 1193552 . - . ID=gene-LU631_RS06115;Name=LU631_RS06115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06115;old_locus_tag=LU631_06115;pseudo=true NZ_CP089940.1 Protein Homology CDS 1192895 1193552 . - 0 ID=cds-LU631_RS06115;Parent=gene-LU631_RS06115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800420.1;locus_tag=LU631_RS06115;product=SDR family NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1193549 1193992 . - . ID=gene-LU631_RS06120;Name=LU631_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06120;old_locus_tag=LU631_06120 NZ_CP089940.1 Protein Homology CDS 1193549 1193992 . - 0 ID=cds-WP_082103822.1;Parent=gene-LU631_RS06120;Dbxref=Genbank:WP_082103822.1;Name=WP_082103822.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016000.2;locus_tag=LU631_RS06120;product=YhcH/YjgK/YiaL family protein;protein_id=WP_082103822.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1194037 1194429 . - . ID=gene-LU631_RS06125;Name=LU631_RS06125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06125;old_locus_tag=LU631_06125;partial=true;pseudo=true;start_range=.,1194037 NZ_CP089940.1 Protein Homology CDS 1194037 1194429 . - 0 ID=cds-LU631_RS06125;Parent=gene-LU631_RS06125;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014701358.1;locus_tag=LU631_RS06125;partial=true;product=iron-containing alcohol dehydrogenase;pseudo=true;start_range=.,1194037;transl_table=11 NZ_CP089940.1 RefSeq gene 1194613 1194903 . + . ID=gene-LU631_RS06130;Name=LU631_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06130;old_locus_tag=LU631_06130 NZ_CP089940.1 GeneMarkS-2+ CDS 1194613 1194903 . + 0 ID=cds-WP_040465432.1;Parent=gene-LU631_RS06130;Dbxref=Genbank:WP_040465432.1;Name=WP_040465432.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06130;product=hypothetical protein;protein_id=WP_040465432.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1194969 1195238 . + . ID=gene-LU631_RS06135;Name=LU631_RS06135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06135;old_locus_tag=LU631_06135;partial=true;pseudo=true;start_range=.,1194969 NZ_CP089940.1 Protein Homology CDS 1194969 1195238 . + 0 ID=cds-LU631_RS06135;Parent=gene-LU631_RS06135;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226860.1;locus_tag=LU631_RS06135;partial=true;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;pseudo=true;start_range=.,1194969;transl_table=11 NZ_CP089940.1 RefSeq gene 1195216 1196052 . + . ID=gene-LU631_RS06140;Name=LU631_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06140;old_locus_tag=LU631_06140 NZ_CP089940.1 Protein Homology CDS 1195216 1196052 . + 0 ID=cds-WP_082103823.1;Parent=gene-LU631_RS06140;Dbxref=Genbank:WP_082103823.1;Name=WP_082103823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200805.1;locus_tag=LU631_RS06140;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_082103823.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1195973 1196782 . - . ID=gene-LU631_RS06145;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=LU631_RS06145;old_locus_tag=LU631_06145 NZ_CP089940.1 Protein Homology CDS 1195973 1196782 . - 0 ID=cds-WP_016190376.1;Parent=gene-LU631_RS06145;Dbxref=Genbank:WP_016190376.1;Name=WP_016190376.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024649.1;locus_tag=LU631_RS06145;product=adenosylmethionine decarboxylase;protein_id=WP_016190376.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1196809 1197666 . - . ID=gene-LU631_RS06150;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=LU631_RS06150;old_locus_tag=LU631_06150 NZ_CP089940.1 Protein Homology CDS 1196809 1197666 . - 0 ID=cds-WP_016190375.1;Parent=gene-LU631_RS06150;Dbxref=Genbank:WP_016190375.1;Name=WP_016190375.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667175.1;locus_tag=LU631_RS06150;product=polyamine aminopropyltransferase;protein_id=WP_016190375.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1197776 1198123 . - . ID=gene-LU631_RS06155;Name=LU631_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06155;old_locus_tag=LU631_06155 NZ_CP089940.1 Protein Homology CDS 1197776 1198123 . - 0 ID=cds-WP_016190374.1;Parent=gene-LU631_RS06155;Dbxref=Genbank:WP_016190374.1;Name=WP_016190374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606565.1;locus_tag=LU631_RS06155;product=YacC family pilotin-like protein;protein_id=WP_016190374.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1198309 1199931 . + . ID=gene-LU631_RS06160;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=LU631_RS06160;old_locus_tag=LU631_06160 NZ_CP089940.1 Protein Homology CDS 1198309 1199931 . + 0 ID=cds-WP_016190373.1;Parent=gene-LU631_RS06160;Dbxref=Genbank:WP_016190373.1;Name=WP_016190373.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200809.1;locus_tag=LU631_RS06160;product=multicopper oxidase CueO;protein_id=WP_016190373.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1200385 1201599 . - . ID=gene-LU631_RS06165;Name=LU631_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06165;old_locus_tag=LU631_06165 NZ_CP089940.1 Protein Homology CDS 1200385 1201599 . - 0 ID=cds-WP_046371879.1-8;Parent=gene-LU631_RS06165;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS06165;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1201608 1201748 . - . ID=gene-LU631_RS06170;Name=LU631_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06170;old_locus_tag=LU631_06170 NZ_CP089940.1 GeneMarkS-2+ CDS 1201608 1201748 . - 0 ID=cds-WP_161796965.1-7;Parent=gene-LU631_RS06170;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06170;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1202422 1202976 . + . ID=gene-LU631_RS06175;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=LU631_RS06175;old_locus_tag=LU631_06175 NZ_CP089940.1 Protein Homology CDS 1202422 1202976 . + 0 ID=cds-WP_016190372.1;Parent=gene-LU631_RS06175;Dbxref=Genbank:WP_016190372.1;Name=WP_016190372.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459175.1;locus_tag=LU631_RS06175;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_016190372.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1203038 1203703 . - . ID=gene-LU631_RS06180;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=LU631_RS06180;old_locus_tag=LU631_06180 NZ_CP089940.1 Protein Homology CDS 1203038 1203703 . - 0 ID=cds-WP_016190371.1;Parent=gene-LU631_RS06180;Dbxref=Genbank:WP_016190371.1;Name=WP_016190371.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200813.1;locus_tag=LU631_RS06180;product=carbonate dehydratase;protein_id=WP_016190371.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1203810 1204736 . + . ID=gene-LU631_RS06185;Name=LU631_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06185;old_locus_tag=LU631_06185 NZ_CP089940.1 Protein Homology CDS 1203810 1204736 . + 0 ID=cds-WP_016190370.1;Parent=gene-LU631_RS06185;Dbxref=Genbank:WP_016190370.1;Name=WP_016190370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004387655.1;locus_tag=LU631_RS06185;product=ABC transporter ATP-binding protein;protein_id=WP_016190370.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1204733 1205503 . + . ID=gene-LU631_RS06190;Name=LU631_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06190;old_locus_tag=LU631_06190 NZ_CP089940.1 Protein Homology CDS 1204733 1205503 . + 0 ID=cds-WP_016190369.1;Parent=gene-LU631_RS06190;Dbxref=Genbank:WP_016190369.1;Name=WP_016190369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200815.1;locus_tag=LU631_RS06190;product=ABC transporter permease;protein_id=WP_016190369.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1205739 1206179 . + . ID=gene-LU631_RS06195;Name=tnpA;end_range=1206179,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS06195;old_locus_tag=LU631_06195;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1205739 1206179 . + 0 ID=cds-LU631_RS06195;Parent=gene-LU631_RS06195;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1206179,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU631_RS06195;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1206254 1206634 . - . ID=gene-LU631_RS06200;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=LU631_RS06200;old_locus_tag=LU631_06200 NZ_CP089940.1 Protein Homology CDS 1206254 1206634 . - 0 ID=cds-WP_016190367.1;Parent=gene-LU631_RS06200;Dbxref=Genbank:WP_016190367.1;Name=WP_016190367.1;Ontology_term=GO:0015940,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=LU631_RS06200;product=aspartate 1-decarboxylase;protein_id=WP_016190367.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1206704 1207558 . - . ID=gene-LU631_RS06205;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=LU631_RS06205;old_locus_tag=LU631_06205 NZ_CP089940.1 Protein Homology CDS 1206704 1207558 . - 0 ID=cds-WP_016190366.1;Parent=gene-LU631_RS06205;Dbxref=Genbank:WP_016190366.1;Name=WP_016190366.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456066.1;locus_tag=LU631_RS06205;product=pantoate--beta-alanine ligase;protein_id=WP_016190366.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1207574 1208368 . - . ID=gene-LU631_RS06210;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=LU631_RS06210;old_locus_tag=LU631_06210 NZ_CP089940.1 Protein Homology CDS 1207574 1208368 . - 0 ID=cds-WP_016190365.1;Parent=gene-LU631_RS06210;Dbxref=Genbank:WP_016190365.1;Name=WP_016190365.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414676.1;locus_tag=LU631_RS06210;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_016190365.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1208429 1208908 . - . ID=gene-LU631_RS06215;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=LU631_RS06215;old_locus_tag=LU631_06215 NZ_CP089940.1 Protein Homology CDS 1208429 1208908 . - 0 ID=cds-WP_016190364.1;Parent=gene-LU631_RS06215;Dbxref=Genbank:WP_016190364.1;Name=WP_016190364.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542095.1;locus_tag=LU631_RS06215;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_016190364.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1208905 1210320 . - . ID=gene-LU631_RS06220;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=LU631_RS06220;old_locus_tag=LU631_06220 NZ_CP089940.1 Protein Homology CDS 1208905 1210320 . - 0 ID=cds-WP_232426844.1;Parent=gene-LU631_RS06220;Dbxref=Genbank:WP_232426844.1;Name=WP_232426844.1;Ontology_term=GO:0006378,GO:0003723,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012885783.1;locus_tag=LU631_RS06220;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_232426844.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1210427 1211332 . - . ID=gene-LU631_RS06225;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=LU631_RS06225;old_locus_tag=LU631_06225 NZ_CP089940.1 Protein Homology CDS 1210427 1211332 . - 0 ID=cds-WP_016190362.1;Parent=gene-LU631_RS06225;Dbxref=Genbank:WP_016190362.1;Name=WP_016190362.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010254032.1;locus_tag=LU631_RS06225;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_016190362.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1211469 1211924 . - . ID=gene-LU631_RS06230;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=LU631_RS06230;old_locus_tag=LU631_06230 NZ_CP089940.1 Protein Homology CDS 1211469 1211924 . - 0 ID=cds-WP_016190361.1;Parent=gene-LU631_RS06230;Dbxref=Genbank:WP_016190361.1;Name=WP_016190361.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=LU631_RS06230;product=RNA polymerase-binding protein DksA;protein_id=WP_016190361.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1212095 1212799 . - . ID=gene-LU631_RS06235;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=LU631_RS06235;old_locus_tag=LU631_06235 NZ_CP089940.1 Protein Homology CDS 1212095 1212799 . - 0 ID=cds-WP_016190360.1;Parent=gene-LU631_RS06235;Dbxref=Genbank:WP_016190360.1;Name=WP_016190360.1;Ontology_term=GO:0000023,GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;go_process=maltose metabolic process|0000023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010254038.1;locus_tag=LU631_RS06235;product=DNA/RNA nuclease SfsA;protein_id=WP_016190360.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1212796 1213335 . - . ID=gene-LU631_RS06240;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=LU631_RS06240;old_locus_tag=LU631_06240 NZ_CP089940.1 Protein Homology CDS 1212796 1213335 . - 0 ID=cds-WP_016190359.1;Parent=gene-LU631_RS06240;Dbxref=Genbank:WP_016190359.1;Name=WP_016190359.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,2'-5'-RNA ligase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814559.1;locus_tag=LU631_RS06240;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_016190359.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1213413 1215854 . + . ID=gene-LU631_RS06245;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=LU631_RS06245;old_locus_tag=LU631_06245 NZ_CP089940.1 Protein Homology CDS 1213413 1215854 . + 0 ID=cds-WP_016190358.1;Parent=gene-LU631_RS06245;Dbxref=Genbank:WP_016190358.1;Name=WP_016190358.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200826.1;locus_tag=LU631_RS06245;product=ATP-dependent helicase HrpB;protein_id=WP_016190358.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1215950 1218433 . + . ID=gene-LU631_RS06250;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=LU631_RS06250;old_locus_tag=LU631_06250 NZ_CP089940.1 Protein Homology CDS 1215950 1218433 . + 0 ID=cds-WP_016190357.1;Parent=gene-LU631_RS06250;Dbxref=Genbank:WP_016190357.1;Name=WP_016190357.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159532.1;locus_tag=LU631_RS06250;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_016190357.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1218797 1219592 . + . ID=gene-LU631_RS06255;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=pseudogene;locus_tag=LU631_RS06255;old_locus_tag=LU631_06255;pseudo=true NZ_CP089940.1 Protein Homology CDS 1218797 1219592 . + 0 ID=cds-LU631_RS06255;Parent=gene-LU631_RS06255;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159512.1;locus_tag=LU631_RS06255;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1219607 1220488 . + . ID=gene-LU631_RS06260;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=LU631_RS06260;old_locus_tag=LU631_06260 NZ_CP089940.1 Protein Homology CDS 1219607 1220488 . + 0 ID=cds-WP_016190356.1;Parent=gene-LU631_RS06260;Dbxref=Genbank:WP_016190356.1;Name=WP_016190356.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800379.1;locus_tag=LU631_RS06260;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_016190356.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1220485 1222467 . + . ID=gene-LU631_RS06265;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=LU631_RS06265;old_locus_tag=LU631_06265 NZ_CP089940.1 Protein Homology CDS 1220485 1222467 . + 0 ID=cds-WP_016190355.1;Parent=gene-LU631_RS06265;Dbxref=Genbank:WP_016190355.1;Name=WP_016190355.1;gbkey=CDS;gene=fhuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200831.1;locus_tag=LU631_RS06265;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_016190355.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1222548 1223831 . - . ID=gene-LU631_RS06270;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=LU631_RS06270;old_locus_tag=LU631_06270 NZ_CP089940.1 Protein Homology CDS 1222548 1223831 . - 0 ID=cds-WP_016190354.1;Parent=gene-LU631_RS06270;Dbxref=Genbank:WP_016190354.1;Name=WP_016190354.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200832.1;locus_tag=LU631_RS06270;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_016190354.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1224036 1225273 . + . ID=gene-LU631_RS06275;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=pseudogene;locus_tag=LU631_RS06275;old_locus_tag=LU631_06275;pseudo=true NZ_CP089940.1 Protein Homology CDS 1224036 1225273 . + 0 ID=cds-LU631_RS06275;Parent=gene-LU631_RS06275;Note=frameshifted%3B internal stop;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929071.1;locus_tag=LU631_RS06275;product=H(+)/Cl(-) exchange transporter ClcA;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1225361 1225705 . + . ID=gene-LU631_RS06280;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=LU631_RS06280;old_locus_tag=LU631_06280 NZ_CP089940.1 Protein Homology CDS 1225361 1225705 . + 0 ID=cds-WP_016190350.1;Parent=gene-LU631_RS06280;Dbxref=Genbank:WP_016190350.1;Name=WP_016190350.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=LU631_RS06280;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_016190350.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1226453 1227151 . - . ID=gene-LU631_RS06285;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=LU631_RS06285;old_locus_tag=LU631_06285 NZ_CP089940.1 Protein Homology CDS 1226453 1227151 . - 0 ID=cds-WP_016190349.1;Parent=gene-LU631_RS06285;Dbxref=Genbank:WP_016190349.1;Name=WP_016190349.1;Ontology_term=GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009092013.1;locus_tag=LU631_RS06285;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_016190349.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1227333 1228847 . + . ID=gene-LU631_RS06290;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=LU631_RS06290;old_locus_tag=LU631_06290 NZ_CP089940.1 Protein Homology CDS 1227333 1228847 . + 0 ID=cds-WP_016190348.1;Parent=gene-LU631_RS06290;Dbxref=Genbank:WP_016190348.1;Name=WP_016190348.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811516.1;locus_tag=LU631_RS06290;product=dGTPase;protein_id=WP_016190348.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1228994 1230418 . + . ID=gene-LU631_RS06295;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=LU631_RS06295;old_locus_tag=LU631_06295 NZ_CP089940.1 Protein Homology CDS 1228994 1230418 . + 0 ID=cds-WP_040465429.1;Parent=gene-LU631_RS06295;Dbxref=Genbank:WP_040465429.1;Name=WP_040465429.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011073684.1;locus_tag=LU631_RS06295;product=serine endoprotease DegP;protein_id=WP_040465429.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1230875 1232032 . + . ID=gene-LU631_RS06300;Name=LU631_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06300;old_locus_tag=LU631_06300 NZ_CP089940.1 Protein Homology CDS 1230875 1232032 . + 0 ID=cds-WP_016190346.1;Parent=gene-LU631_RS06300;Dbxref=Genbank:WP_016190346.1;Name=WP_016190346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190346.1;locus_tag=LU631_RS06300;product=CdaR family transcriptional regulator;protein_id=WP_016190346.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1232131 1232523 . - . ID=gene-LU631_RS06305;Name=LU631_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06305;old_locus_tag=LU631_06305 NZ_CP089940.1 Protein Homology CDS 1232131 1232523 . - 0 ID=cds-WP_016190345.1;Parent=gene-LU631_RS06305;Dbxref=Genbank:WP_016190345.1;Name=WP_016190345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440633.1;locus_tag=LU631_RS06305;product=DUF3461 family protein;protein_id=WP_016190345.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1232845 1233669 . - . ID=gene-LU631_RS06310;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=LU631_RS06310;old_locus_tag=LU631_06310 NZ_CP089940.1 Protein Homology CDS 1232845 1233669 . - 0 ID=cds-WP_016190344.1;Parent=gene-LU631_RS06310;Dbxref=Genbank:WP_016190344.1;Name=WP_016190344.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=LU631_RS06310;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_016190344.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1233766 1236411 . - . ID=gene-LU631_RS06315;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=LU631_RS06315;old_locus_tag=LU631_06315 NZ_CP089940.1 Protein Homology CDS 1233766 1236411 . - 0 ID=cds-WP_016190343.1;Parent=gene-LU631_RS06315;Dbxref=Genbank:WP_016190343.1;Name=WP_016190343.1;Ontology_term=GO:0006807,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200842.1;locus_tag=LU631_RS06315;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_016190343.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1236609 1237403 . - . ID=gene-LU631_RS06320;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=LU631_RS06320;old_locus_tag=LU631_06320 NZ_CP089940.1 Protein Homology CDS 1236609 1237403 . - 0 ID=cds-WP_016190342.1;Parent=gene-LU631_RS06320;Dbxref=Genbank:WP_016190342.1;Name=WP_016190342.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159481.1;locus_tag=LU631_RS06320;product=type I methionyl aminopeptidase;protein_id=WP_016190342.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1237745 1238470 . + . ID=gene-LU631_RS06325;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=LU631_RS06325;old_locus_tag=LU631_06325 NZ_CP089940.1 Protein Homology CDS 1237745 1238470 . + 0 ID=cds-WP_016190341.1;Parent=gene-LU631_RS06325;Dbxref=Genbank:WP_016190341.1;Name=WP_016190341.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=LU631_RS06325;product=30S ribosomal protein S2;protein_id=WP_016190341.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1238779 1239630 . + . ID=gene-LU631_RS06330;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=LU631_RS06330;old_locus_tag=LU631_06330 NZ_CP089940.1 Protein Homology CDS 1238779 1239630 . + 0 ID=cds-WP_016190340.1;Parent=gene-LU631_RS06330;Dbxref=Genbank:WP_016190340.1;Name=WP_016190340.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459222.1;locus_tag=LU631_RS06330;product=translation elongation factor Ts;protein_id=WP_016190340.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1239784 1240509 . + . ID=gene-LU631_RS06335;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=LU631_RS06335;old_locus_tag=LU631_06335 NZ_CP089940.1 Protein Homology CDS 1239784 1240509 . + 0 ID=cds-WP_016190339.1;Parent=gene-LU631_RS06335;Dbxref=Genbank:WP_016190339.1;Name=WP_016190339.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931940.1;locus_tag=LU631_RS06335;product=UMP kinase;protein_id=WP_016190339.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1240644 1241201 . + . ID=gene-LU631_RS06340;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=LU631_RS06340;old_locus_tag=LU631_06340 NZ_CP089940.1 Protein Homology CDS 1240644 1241201 . + 0 ID=cds-WP_016190338.1;Parent=gene-LU631_RS06340;Dbxref=Genbank:WP_016190338.1;Name=WP_016190338.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225219.1;locus_tag=LU631_RS06340;product=ribosome recycling factor;protein_id=WP_016190338.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1241333 1242529 . + . ID=gene-LU631_RS06345;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=LU631_RS06345;old_locus_tag=LU631_06345 NZ_CP089940.1 Protein Homology CDS 1241333 1242529 . + 0 ID=cds-WP_016190337.1;Parent=gene-LU631_RS06345;Dbxref=Genbank:WP_016190337.1;Name=WP_016190337.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200848.1;locus_tag=LU631_RS06345;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_016190337.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1242725 1243477 . + . ID=gene-LU631_RS06350;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=LU631_RS06350;old_locus_tag=LU631_06350 NZ_CP089940.1 Protein Homology CDS 1242725 1243477 . + 0 ID=cds-WP_016190336.1;Parent=gene-LU631_RS06350;Dbxref=Genbank:WP_016190336.1;Name=WP_016190336.1;Ontology_term=GO:0043164,GO:0002094,GO:0008834;gbkey=CDS;gene=ispU;go_function=polyprenyltransferase activity|0002094||IEA,di-trans%2Cpoly-cis-decaprenylcistransferase activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017348525.1;locus_tag=LU631_RS06350;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_016190336.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1243496 1244353 . + . ID=gene-LU631_RS06355;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=LU631_RS06355;old_locus_tag=LU631_06355 NZ_CP089940.1 Protein Homology CDS 1243496 1244353 . + 0 ID=cds-WP_016190335.1;Parent=gene-LU631_RS06355;Dbxref=Genbank:WP_016190335.1;Name=WP_016190335.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426717.1;locus_tag=LU631_RS06355;product=phosphatidate cytidylyltransferase;protein_id=WP_016190335.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1244363 1245712 . + . ID=gene-LU631_RS06360;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=LU631_RS06360;old_locus_tag=LU631_06360 NZ_CP089940.1 Protein Homology CDS 1244363 1245712 . + 0 ID=cds-WP_016190334.1;Parent=gene-LU631_RS06360;Dbxref=Genbank:WP_016190334.1;Name=WP_016190334.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=LU631_RS06360;product=sigma E protease regulator RseP;protein_id=WP_016190334.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1245768 1248170 . + . ID=gene-LU631_RS06365;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=LU631_RS06365;old_locus_tag=LU631_06365 NZ_CP089940.1 Protein Homology CDS 1245768 1248170 . + 0 ID=cds-WP_016190333.1;Parent=gene-LU631_RS06365;Dbxref=Genbank:WP_016190333.1;Name=WP_016190333.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440646.1;locus_tag=LU631_RS06365;product=outer membrane protein assembly factor BamA;protein_id=WP_016190333.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1248333 1248830 . + . ID=gene-LU631_RS06370;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=LU631_RS06370;old_locus_tag=LU631_06370 NZ_CP089940.1 Protein Homology CDS 1248333 1248830 . + 0 ID=cds-WP_016190332.1;Parent=gene-LU631_RS06370;Dbxref=Genbank:WP_016190332.1;Name=WP_016190332.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212140.1;locus_tag=LU631_RS06370;product=molecular chaperone Skp;protein_id=WP_016190332.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1248834 1249856 . + . ID=gene-LU631_RS06375;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=LU631_RS06375;old_locus_tag=LU631_06375 NZ_CP089940.1 Protein Homology CDS 1248834 1249856 . + 0 ID=cds-WP_016190331.1;Parent=gene-LU631_RS06375;Dbxref=Genbank:WP_016190331.1;Name=WP_016190331.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170608.1;locus_tag=LU631_RS06375;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_016190331.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1250015 1250470 . + . ID=gene-LU631_RS06380;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=LU631_RS06380;old_locus_tag=LU631_06380 NZ_CP089940.1 Protein Homology CDS 1250015 1250470 . + 0 ID=cds-WP_016190330.1;Parent=gene-LU631_RS06380;Dbxref=Genbank:WP_016190330.1;Name=WP_016190330.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436969.1;locus_tag=LU631_RS06380;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_016190330.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1250474 1251262 . + . ID=gene-LU631_RS06385;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=LU631_RS06385;old_locus_tag=LU631_06385 NZ_CP089940.1 Protein Homology CDS 1250474 1251262 . + 0 ID=cds-WP_016190329.1;Parent=gene-LU631_RS06385;Dbxref=Genbank:WP_016190329.1;Name=WP_016190329.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=LU631_RS06385;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_016190329.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1251275 1252468 . + . ID=gene-LU631_RS06390;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=LU631_RS06390;old_locus_tag=LU631_06390 NZ_CP089940.1 Protein Homology CDS 1251275 1252468 . + 0 ID=cds-WP_046372209.1;Parent=gene-LU631_RS06390;Dbxref=Genbank:WP_046372209.1;Name=WP_046372209.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000132067.1;locus_tag=LU631_RS06390;product=lipid-A-disaccharide synthase;protein_id=WP_046372209.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1252465 1253088 . + . ID=gene-LU631_RS06395;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=LU631_RS06395;old_locus_tag=LU631_06395 NZ_CP089940.1 Protein Homology CDS 1252465 1253088 . + 0 ID=cds-WP_016190327.1;Parent=gene-LU631_RS06395;Dbxref=Genbank:WP_016190327.1;Name=WP_016190327.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200858.1;locus_tag=LU631_RS06395;product=ribonuclease HII;protein_id=WP_016190327.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1253121 1256603 . + . ID=gene-LU631_RS06400;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=LU631_RS06400;old_locus_tag=LU631_06400 NZ_CP089940.1 Protein Homology CDS 1253121 1256603 . + 0 ID=cds-WP_016190326.1;Parent=gene-LU631_RS06400;Dbxref=Genbank:WP_016190326.1;Name=WP_016190326.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225231.1;locus_tag=LU631_RS06400;product=DNA polymerase III subunit alpha;protein_id=WP_016190326.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1256615 1257574 . + . ID=gene-LU631_RS06405;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=LU631_RS06405;old_locus_tag=LU631_06405 NZ_CP089940.1 Protein Homology CDS 1256615 1257574 . + 0 ID=cds-WP_016190325.1;Parent=gene-LU631_RS06405;Dbxref=Genbank:WP_016190325.1;Name=WP_016190325.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=LU631_RS06405;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_016190325.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1258123 1258941 . + . ID=gene-LU631_RS06410;Name=LU631_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06410;old_locus_tag=LU631_06410 NZ_CP089940.1 Protein Homology CDS 1258123 1258941 . + 0 ID=cds-WP_040465428.1;Parent=gene-LU631_RS06410;Dbxref=Genbank:WP_040465428.1;Name=WP_040465428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374224.1;locus_tag=LU631_RS06410;product=A24 family peptidase;protein_id=WP_040465428.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1259150 1259539 . + . ID=gene-LU631_RS06415;Name=LU631_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06415;old_locus_tag=LU631_06415 NZ_CP089940.1 Protein Homology CDS 1259150 1259539 . + 0 ID=cds-WP_016190323.1;Parent=gene-LU631_RS06415;Dbxref=Genbank:WP_016190323.1;Name=WP_016190323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200862.1;locus_tag=LU631_RS06415;product=VOC family protein;protein_id=WP_016190323.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1259598 1260938 . + . ID=gene-LU631_RS06420;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=LU631_RS06420;old_locus_tag=LU631_06420 NZ_CP089940.1 Protein Homology CDS 1259598 1260938 . + 0 ID=cds-WP_016190322.1;Parent=gene-LU631_RS06420;Dbxref=Genbank:WP_016190322.1;Name=WP_016190322.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200863.1;locus_tag=LU631_RS06420;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_016190322.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1261083 1261346 . - . ID=gene-LU631_RS06425;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=LU631_RS06425;old_locus_tag=LU631_06425 NZ_CP089940.1 Protein Homology CDS 1261083 1261346 . - 0 ID=cds-WP_016190321.1;Parent=gene-LU631_RS06425;Dbxref=Genbank:WP_016190321.1;Name=WP_016190321.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159420.1;locus_tag=LU631_RS06425;product=Rho-binding antiterminator;protein_id=WP_016190321.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1261333 1261533 . - . ID=gene-LU631_RS06430;Name=LU631_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06430;old_locus_tag=LU631_06430 NZ_CP089940.1 Protein Homology CDS 1261333 1261533 . - 0 ID=cds-WP_016190320.1;Parent=gene-LU631_RS06430;Dbxref=Genbank:WP_016190320.1;Name=WP_016190320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146467.1;locus_tag=LU631_RS06430;product=YaeP family protein;protein_id=WP_016190320.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1261663 1262217 . + . ID=gene-LU631_RS06435;Name=LU631_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06435;old_locus_tag=LU631_06435 NZ_CP089940.1 Protein Homology CDS 1261663 1262217 . + 0 ID=cds-WP_016190319.1;Parent=gene-LU631_RS06435;Dbxref=Genbank:WP_016190319.1;Name=WP_016190319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200865.1;locus_tag=LU631_RS06435;product=YaeQ family protein;protein_id=WP_016190319.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1262214 1262633 . + . ID=gene-LU631_RS06440;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=LU631_RS06440;old_locus_tag=LU631_06440 NZ_CP089940.1 Protein Homology CDS 1262214 1262633 . + 0 ID=cds-WP_016190318.1;Parent=gene-LU631_RS06440;Dbxref=Genbank:WP_016190318.1;Name=WP_016190318.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810027.1;locus_tag=LU631_RS06440;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_016190318.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1263023 1264741 . - . ID=gene-LU631_RS06445;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=LU631_RS06445;old_locus_tag=LU631_06445 NZ_CP089940.1 Protein Homology CDS 1263023 1264741 . - 0 ID=cds-WP_016190317.1;Parent=gene-LU631_RS06445;Dbxref=Genbank:WP_016190317.1;Name=WP_016190317.1;Ontology_term=GO:0006433,GO:0004827,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163997.1;locus_tag=LU631_RS06445;product=proline--tRNA ligase;protein_id=WP_016190317.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1264851 1265558 . - . ID=gene-LU631_RS06450;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=LU631_RS06450;old_locus_tag=LU631_06450 NZ_CP089940.1 Protein Homology CDS 1264851 1265558 . - 0 ID=cds-WP_016190316.1;Parent=gene-LU631_RS06450;Dbxref=Genbank:WP_016190316.1;Name=WP_016190316.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024710.1;locus_tag=LU631_RS06450;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_016190316.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1265555 1265959 . - . ID=gene-LU631_RS06455;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=LU631_RS06455;old_locus_tag=LU631_06455 NZ_CP089940.1 Protein Homology CDS 1265555 1265959 . - 0 ID=cds-WP_016190315.1;Parent=gene-LU631_RS06455;Dbxref=Genbank:WP_016190315.1;Name=WP_016190315.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212158.1;locus_tag=LU631_RS06455;product=Rcs stress response system protein RcsF;protein_id=WP_016190315.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1266100 1266915 . - . ID=gene-LU631_RS06460;Name=LU631_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06460;old_locus_tag=LU631_06460 NZ_CP089940.1 Protein Homology CDS 1266100 1266915 . - 0 ID=cds-WP_016190314.1;Parent=gene-LU631_RS06460;Dbxref=Genbank:WP_016190314.1;Name=WP_016190314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016534993.1;locus_tag=LU631_RS06460;product=MetQ/NlpA family lipoprotein;protein_id=WP_016190314.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1266946 1267599 . - . ID=gene-LU631_RS06465;Name=LU631_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06465;old_locus_tag=LU631_06465 NZ_CP089940.1 Protein Homology CDS 1266946 1267599 . - 0 ID=cds-WP_016190313.1;Parent=gene-LU631_RS06465;Dbxref=Genbank:WP_016190313.1;Name=WP_016190313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=LU631_RS06465;product=methionine ABC transporter permease MetI;protein_id=WP_016190313.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1267592 1268623 . - . ID=gene-LU631_RS06470;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=LU631_RS06470;old_locus_tag=LU631_06470 NZ_CP089940.1 Protein Homology CDS 1267592 1268623 . - 0 ID=cds-WP_016190312.1;Parent=gene-LU631_RS06470;Dbxref=Genbank:WP_016190312.1;Name=WP_016190312.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009898,GO:0055052;gbkey=CDS;gene=metN;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308228.1;locus_tag=LU631_RS06470;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_016190312.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1268804 1269364 . + . ID=gene-LU631_RS06475;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=LU631_RS06475;old_locus_tag=LU631_06475 NZ_CP089940.1 Protein Homology CDS 1268804 1269364 . + 0 ID=cds-WP_016190311.1;Parent=gene-LU631_RS06475;Dbxref=Genbank:WP_016190311.1;Name=WP_016190311.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852609.1;locus_tag=LU631_RS06475;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_016190311.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1269764 1271305 . + . ID=gene-LU631_RS06480;Name=LU631_RS06480;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU631_RS06480;old_locus_tag=LU631_06480 NZ_CP089940.1 cmsearch rRNA 1269764 1271305 . + . ID=rna-LU631_RS06480;Parent=gene-LU631_RS06480;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS06480;product=16S ribosomal RNA NZ_CP089940.1 cmsearch exon 1269764 1271305 . + . ID=exon-LU631_RS06480-1;Parent=rna-LU631_RS06480;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS06480;product=16S ribosomal RNA NZ_CP089940.1 RefSeq gene 1271378 1271453 . + . ID=gene-LU631_RS06485;Name=LU631_RS06485;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS06485;old_locus_tag=LU631_06485 NZ_CP089940.1 tRNAscan-SE tRNA 1271378 1271453 . + . ID=rna-LU631_RS06485;Parent=gene-LU631_RS06485;anticodon=(pos:1271412..1271414);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS06485;product=tRNA-Glu NZ_CP089940.1 tRNAscan-SE exon 1271378 1271453 . + . ID=exon-LU631_RS06485-1;Parent=rna-LU631_RS06485;anticodon=(pos:1271412..1271414);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS06485;product=tRNA-Glu NZ_CP089940.1 RefSeq gene 1271656 1274558 . + . ID=gene-LU631_RS06490;Name=LU631_RS06490;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU631_RS06490;old_locus_tag=LU631_06490 NZ_CP089940.1 cmsearch rRNA 1271656 1274558 . + . ID=rna-LU631_RS06490;Parent=gene-LU631_RS06490;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS06490;product=23S ribosomal RNA NZ_CP089940.1 cmsearch exon 1271656 1274558 . + . ID=exon-LU631_RS06490-1;Parent=rna-LU631_RS06490;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS06490;product=23S ribosomal RNA NZ_CP089940.1 RefSeq gene 1274762 1274877 . + . ID=gene-LU631_RS06495;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LU631_RS06495;old_locus_tag=LU631_06495 NZ_CP089940.1 cmsearch rRNA 1274762 1274877 . + . ID=rna-LU631_RS06495;Parent=gene-LU631_RS06495;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS06495;product=5S ribosomal RNA NZ_CP089940.1 cmsearch exon 1274762 1274877 . + . ID=exon-LU631_RS06495-1;Parent=rna-LU631_RS06495;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS06495;product=5S ribosomal RNA NZ_CP089940.1 RefSeq gene 1274933 1275008 . + . ID=gene-LU631_RS06500;Name=LU631_RS06500;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS06500;old_locus_tag=LU631_06500 NZ_CP089940.1 tRNAscan-SE tRNA 1274933 1275008 . + . ID=rna-LU631_RS06500;Parent=gene-LU631_RS06500;anticodon=(pos:1274966..1274968);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS06500;product=tRNA-Thr NZ_CP089940.1 tRNAscan-SE exon 1274933 1275008 . + . ID=exon-LU631_RS06500-1;Parent=rna-LU631_RS06500;anticodon=(pos:1274966..1274968);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS06500;product=tRNA-Thr NZ_CP089940.1 RefSeq gene 1275038 1275153 . + . ID=gene-LU631_RS06505;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LU631_RS06505;old_locus_tag=LU631_06505 NZ_CP089940.1 cmsearch rRNA 1275038 1275153 . + . ID=rna-LU631_RS06505;Parent=gene-LU631_RS06505;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS06505;product=5S ribosomal RNA NZ_CP089940.1 cmsearch exon 1275038 1275153 . + . ID=exon-LU631_RS06505-1;Parent=rna-LU631_RS06505;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS06505;product=5S ribosomal RNA NZ_CP089940.1 RefSeq gene 1275265 1275341 . + . ID=gene-LU631_RS06510;Name=LU631_RS06510;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS06510;old_locus_tag=LU631_06510 NZ_CP089940.1 tRNAscan-SE tRNA 1275265 1275341 . + . ID=rna-LU631_RS06510;Parent=gene-LU631_RS06510;anticodon=(pos:1275299..1275301);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS06510;product=tRNA-Asp NZ_CP089940.1 tRNAscan-SE exon 1275265 1275341 . + . ID=exon-LU631_RS06510-1;Parent=rna-LU631_RS06510;anticodon=(pos:1275299..1275301);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS06510;product=tRNA-Asp NZ_CP089940.1 RefSeq gene 1275669 1276709 . - . ID=gene-LU631_RS06515;Name=LU631_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06515;old_locus_tag=LU631_06515 NZ_CP089940.1 Protein Homology CDS 1275669 1276709 . - 0 ID=cds-WP_046371791.1-4;Parent=gene-LU631_RS06515;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS06515;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1276899 1278010 . - . ID=gene-LU631_RS06520;Name=LU631_RS06520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06520;old_locus_tag=LU631_06520;pseudo=true NZ_CP089940.1 Protein Homology CDS 1276899 1278010 . - 0 ID=cds-LU631_RS06520;Parent=gene-LU631_RS06520;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_104918382.1;locus_tag=LU631_RS06520;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1278167 1278604 . - . ID=gene-LU631_RS06525;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS06525;old_locus_tag=LU631_06525 NZ_CP089940.1 Protein Homology CDS 1278167 1278604 . - 0 ID=cds-WP_046372210.1;Parent=gene-LU631_RS06525;Dbxref=Genbank:WP_046372210.1;Name=WP_046372210.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS06525;product=IS200/IS605 family transposase;protein_id=WP_046372210.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1278863 1279294 . - . ID=gene-LU631_RS26025;Name=LU631_RS26025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26025 NZ_CP089940.1 Protein Homology CDS 1278863 1279294 . - 0 ID=cds-WP_046372013.1-3;Parent=gene-LU631_RS26025;Dbxref=Genbank:WP_046372013.1;Name=WP_046372013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26025;product=IS91 family transposase;protein_id=WP_046372013.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1279306 1280076 . - . ID=gene-LU631_RS26030;Name=LU631_RS26030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26030 NZ_CP089940.1 Protein Homology CDS 1279306 1280076 . - 0 ID=cds-WP_267921497.1-3;Parent=gene-LU631_RS26030;Dbxref=Genbank:WP_267921497.1;Name=WP_267921497.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26030;product=transposase zinc-binding domain-containing protein;protein_id=WP_267921497.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1280085 1280372 . - . ID=gene-LU631_RS06535;Name=LU631_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06535;old_locus_tag=LU631_06535 NZ_CP089940.1 GeneMarkS-2+ CDS 1280085 1280372 . - 0 ID=cds-WP_152664259.1;Parent=gene-LU631_RS06535;Dbxref=Genbank:WP_152664259.1;Name=WP_152664259.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06535;product=hypothetical protein;protein_id=WP_152664259.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1280346 1280582 . + . ID=gene-LU631_RS06540;Name=LU631_RS06540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06540;old_locus_tag=LU631_06540;partial=true;pseudo=true;start_range=.,1280346 NZ_CP089940.1 Protein Homology CDS 1280346 1280582 . + 0 ID=cds-LU631_RS06540;Parent=gene-LU631_RS06540;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011625997.1;locus_tag=LU631_RS06540;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,1280346;transl_table=11 NZ_CP089940.1 RefSeq gene 1280943 1281749 . + . ID=gene-LU631_RS06545;Name=LU631_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06545;old_locus_tag=LU631_06545 NZ_CP089940.1 Protein Homology CDS 1280943 1281749 . + 0 ID=cds-WP_040465927.1;Parent=gene-LU631_RS06545;Dbxref=Genbank:WP_040465927.1;Name=WP_040465927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606543.1;locus_tag=LU631_RS06545;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_040465927.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1282109 1283497 . - . ID=gene-LU631_RS06550;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=LU631_RS06550;old_locus_tag=LU631_06550 NZ_CP089940.1 Protein Homology CDS 1282109 1283497 . - 0 ID=cds-WP_040465928.1;Parent=gene-LU631_RS06550;Dbxref=Genbank:WP_040465928.1;Name=WP_040465928.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156037.1;locus_tag=LU631_RS06550;product=murein transglycosylase D;protein_id=WP_040465928.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1283567 1284322 . - . ID=gene-LU631_RS06555;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=LU631_RS06555;old_locus_tag=LU631_06555 NZ_CP089940.1 Protein Homology CDS 1283567 1284322 . - 0 ID=cds-WP_046372212.1;Parent=gene-LU631_RS06555;Dbxref=Genbank:WP_046372212.1;Name=WP_046372212.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106317.1;locus_tag=LU631_RS06555;product=hydroxyacylglutathione hydrolase;protein_id=WP_046372212.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1284368 1285105 . + . ID=gene-LU631_RS06560;Name=LU631_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06560;old_locus_tag=LU631_06560 NZ_CP089940.1 Protein Homology CDS 1284368 1285105 . + 0 ID=cds-WP_016193121.1;Parent=gene-LU631_RS06560;Dbxref=Genbank:WP_016193121.1;Name=WP_016193121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024720.1;locus_tag=LU631_RS06560;product=class I SAM-dependent methyltransferase;protein_id=WP_016193121.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1285090 1285557 . - . ID=gene-LU631_RS06565;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=LU631_RS06565;old_locus_tag=LU631_06565 NZ_CP089940.1 Protein Homology CDS 1285090 1285557 . - 0 ID=cds-WP_016193122.1;Parent=gene-LU631_RS06565;Dbxref=Genbank:WP_016193122.1;Name=WP_016193122.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013507980.1;locus_tag=LU631_RS06565;product=ribonuclease HI;protein_id=WP_016193122.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1285609 1286343 . + . ID=gene-LU631_RS06570;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=LU631_RS06570;old_locus_tag=LU631_06570 NZ_CP089940.1 Protein Homology CDS 1285609 1286343 . + 0 ID=cds-WP_016193123.1;Parent=gene-LU631_RS06570;Dbxref=Genbank:WP_016193123.1;Name=WP_016193123.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=LU631_RS06570;product=DNA polymerase III subunit epsilon;protein_id=WP_016193123.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1286466 1286542 . + . ID=gene-LU631_RS06575;Name=LU631_RS06575;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS06575;old_locus_tag=LU631_06575 NZ_CP089940.1 tRNAscan-SE tRNA 1286466 1286542 . + . ID=rna-LU631_RS06575;Parent=gene-LU631_RS06575;anticodon=(pos:1286500..1286502);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS06575;product=tRNA-Asp NZ_CP089940.1 tRNAscan-SE exon 1286466 1286542 . + . ID=exon-LU631_RS06575-1;Parent=rna-LU631_RS06575;anticodon=(pos:1286500..1286502);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS06575;product=tRNA-Asp NZ_CP089940.1 RefSeq pseudogene 1287018 1287459 . + . ID=gene-LU631_RS06580;Name=mtnC;gbkey=Gene;gene=mtnC;gene_biotype=pseudogene;locus_tag=LU631_RS06580;old_locus_tag=LU631_06580;partial=true;pseudo=true;start_range=.,1287018 NZ_CP089940.1 Protein Homology CDS 1287018 1287459 . + 0 ID=cds-LU631_RS06580;Parent=gene-LU631_RS06580;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019509,GO:0016791,GO:0016862;gbkey=CDS;gene=mtnC;go_function=phosphatase activity|0016791||IEA,intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016537695.1;locus_tag=LU631_RS06580;partial=true;product=acireductone synthase;pseudo=true;start_range=.,1287018;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1287431 1287902 . + . ID=gene-LU631_RS06585;Name=LU631_RS06585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06585;old_locus_tag=LU631_06585;pseudo=true NZ_CP089940.1 Protein Homology CDS 1287431 1287902 . + 0 ID=cds-LU631_RS06585;Parent=gene-LU631_RS06585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225781.1;locus_tag=LU631_RS06585;product=acireductone dioxygenase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1288159 1289190 . - . ID=gene-LU631_RS06590;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=LU631_RS06590;old_locus_tag=LU631_06590 NZ_CP089940.1 Protein Homology CDS 1288159 1289190 . - 0 ID=cds-WP_016193127.1;Parent=gene-LU631_RS06590;Dbxref=Genbank:WP_016193127.1;Name=WP_016193127.1;Ontology_term=GO:0019509,GO:0046523;gbkey=CDS;gene=mtnA;go_function=S-methyl-5-thioribose-1-phosphate isomerase activity|0046523||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012764546.1;locus_tag=LU631_RS06590;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=WP_016193127.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1289339 1290538 . + . ID=gene-LU631_RS06595;Name=mtnK;gbkey=Gene;gene=mtnK;gene_biotype=protein_coding;locus_tag=LU631_RS06595;old_locus_tag=LU631_06595 NZ_CP089940.1 Protein Homology CDS 1289339 1290538 . + 0 ID=cds-WP_016193128.1;Parent=gene-LU631_RS06595;Dbxref=Genbank:WP_016193128.1;Name=WP_016193128.1;Ontology_term=GO:0019509,GO:0046522;gbkey=CDS;gene=mtnK;go_function=S-methyl-5-thioribose kinase activity|0046522||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543536.1;locus_tag=LU631_RS06595;product=S-methyl-5-thioribose kinase;protein_id=WP_016193128.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1290613 1291252 . - . ID=gene-LU631_RS06600;Name=LU631_RS06600;end_range=1291252,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06600;old_locus_tag=LU631_06600;partial=true;pseudo=true;start_range=.,1290613 NZ_CP089940.1 Protein Homology CDS 1290613 1291252 . - 0 ID=cds-LU631_RS06600;Parent=gene-LU631_RS06600;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1291252,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS06600;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1290613;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1291383 1292149 . - . ID=gene-LU631_RS06605;Name=LU631_RS06605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06605;old_locus_tag=LU631_06605;partial=true;pseudo=true;start_range=.,1291383 NZ_CP089940.1 Protein Homology CDS 1291383 1292149 . - 0 ID=cds-LU631_RS06605;Parent=gene-LU631_RS06605;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225261.1;locus_tag=LU631_RS06605;partial=true;product=acyl-CoA dehydrogenase family protein;pseudo=true;start_range=.,1291383;transl_table=11 NZ_CP089940.1 RefSeq gene 1292363 1292941 . + . ID=gene-LU631_RS06610;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=LU631_RS06610;old_locus_tag=LU631_06610 NZ_CP089940.1 Protein Homology CDS 1292363 1292941 . + 0 ID=cds-WP_016193132.1;Parent=gene-LU631_RS06610;Dbxref=Genbank:WP_016193132.1;Name=WP_016193132.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200911.1;locus_tag=LU631_RS06610;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_016193132.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1292985 1293752 . + . ID=gene-LU631_RS06615;Name=LU631_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06615;old_locus_tag=LU631_06615 NZ_CP089940.1 Protein Homology CDS 1292985 1293752 . + 0 ID=cds-WP_016193133.1;Parent=gene-LU631_RS06615;Dbxref=Genbank:WP_016193133.1;Name=WP_016193133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156100.1;locus_tag=LU631_RS06615;product=class II glutamine amidotransferase;protein_id=WP_016193133.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1293723 1294466 . - . ID=gene-LU631_RS06620;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=LU631_RS06620;old_locus_tag=LU631_06620 NZ_CP089940.1 Protein Homology CDS 1293723 1294466 . - 0 ID=cds-WP_016193134.1;Parent=gene-LU631_RS06620;Dbxref=Genbank:WP_016193134.1;Name=WP_016193134.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606503.1;locus_tag=LU631_RS06620;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_016193134.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1294710 1295930 . - . ID=gene-LU631_RS06625;Name=LU631_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06625;old_locus_tag=LU631_06625 NZ_CP089940.1 Protein Homology CDS 1294710 1295930 . - 0 ID=cds-WP_046371806.1-3;Parent=gene-LU631_RS06625;Dbxref=Genbank:WP_046371806.1;Name=WP_046371806.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025244073.1;locus_tag=LU631_RS06625;product=ISL3 family transposase;protein_id=WP_046371806.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1296025 1297080 . + . ID=gene-LU631_RS06630;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=LU631_RS06630;old_locus_tag=LU631_06630 NZ_CP089940.1 Protein Homology CDS 1296025 1297080 . + 0 ID=cds-WP_040465929.1;Parent=gene-LU631_RS06630;Dbxref=Genbank:WP_040465929.1;Name=WP_040465929.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414766.1;locus_tag=LU631_RS06630;product=DNA polymerase IV;protein_id=WP_040465929.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1297248 1298705 . - . ID=gene-LU631_RS06635;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=LU631_RS06635;old_locus_tag=LU631_06635 NZ_CP089940.1 Protein Homology CDS 1297248 1298705 . - 0 ID=cds-WP_016193136.1;Parent=gene-LU631_RS06635;Dbxref=Genbank:WP_016193136.1;Name=WP_016193136.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=LU631_RS06635;product=beta-Ala-His dipeptidase;protein_id=WP_016193136.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1298958 1299416 . + . ID=gene-LU631_RS06640;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=LU631_RS06640;old_locus_tag=LU631_06640 NZ_CP089940.1 Protein Homology CDS 1298958 1299416 . + 0 ID=cds-WP_016193137.1;Parent=gene-LU631_RS06640;Dbxref=Genbank:WP_016193137.1;Name=WP_016193137.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200916.1;locus_tag=LU631_RS06640;product=xanthine phosphoribosyltransferase;protein_id=WP_016193137.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1299561 1300781 . + . ID=gene-LU631_RS06645;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=LU631_RS06645;old_locus_tag=LU631_06645 NZ_CP089940.1 Protein Homology CDS 1299561 1300781 . + 0 ID=cds-WP_016193138.1;Parent=gene-LU631_RS06645;Dbxref=Genbank:WP_016193138.1;Name=WP_016193138.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008924842.1;locus_tag=LU631_RS06645;product=esterase FrsA;protein_id=WP_016193138.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1300886 1301287 . + . ID=gene-LU631_RS06650;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=LU631_RS06650;old_locus_tag=LU631_06650 NZ_CP089940.1 Protein Homology CDS 1300886 1301287 . + 0 ID=cds-WP_016193139.1;Parent=gene-LU631_RS06650;Dbxref=Genbank:WP_016193139.1;Name=WP_016193139.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000174676.1;locus_tag=LU631_RS06650;product=sigma factor-binding protein Crl;protein_id=WP_016193139.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1301482 1301817 . - . ID=gene-LU631_RS26035;Name=LU631_RS26035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26035 NZ_CP089940.1 GeneMarkS-2+ CDS 1301482 1301817 . - 0 ID=cds-WP_267958440.1;Parent=gene-LU631_RS26035;Dbxref=Genbank:WP_267958440.1;Name=WP_267958440.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS26035;product=hypothetical protein;protein_id=WP_267958440.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1301774 1302706 . - . ID=gene-LU631_RS06655;Name=LU631_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06655;old_locus_tag=LU631_06655 NZ_CP089940.1 Protein Homology CDS 1301774 1302706 . - 0 ID=cds-WP_267958444.1;Parent=gene-LU631_RS06655;Dbxref=Genbank:WP_267958444.1;Name=WP_267958444.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU631_RS06655;product=IS91 family transposase;protein_id=WP_267958444.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1302821 1303019 . - . ID=gene-LU631_RS06660;Name=LU631_RS06660;end_range=1303019,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06660;old_locus_tag=LU631_06660;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1302821 1303019 . - 0 ID=cds-LU631_RS06660;Parent=gene-LU631_RS06660;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0034220,GO:0015288,GO:0009279,GO:0016020;end_range=1303019,.;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210809.1;locus_tag=LU631_RS06660;partial=true;product=porin;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1303068 1303157 . - . ID=gene-LU631_RS06665;Name=LU631_RS06665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06665;old_locus_tag=LU631_06665;partial=true;pseudo=true;start_range=.,1303068 NZ_CP089940.1 Protein Homology CDS 1303068 1303157 . - 0 ID=cds-LU631_RS06665;Parent=gene-LU631_RS06665;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012489.2;locus_tag=LU631_RS06665;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1303068;transl_table=11 NZ_CP089940.1 RefSeq gene 1303479 1304582 . + . ID=gene-LU631_RS06670;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=LU631_RS06670;old_locus_tag=LU631_06670 NZ_CP089940.1 Protein Homology CDS 1303479 1304582 . + 0 ID=cds-WP_016193143.1;Parent=gene-LU631_RS06670;Dbxref=Genbank:WP_016193143.1;Name=WP_016193143.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118057.1;locus_tag=LU631_RS06670;product=glutamate 5-kinase;protein_id=WP_016193143.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1304598 1305851 . + . ID=gene-LU631_RS06675;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=LU631_RS06675;old_locus_tag=LU631_06675 NZ_CP089940.1 Protein Homology CDS 1304598 1305851 . + 0 ID=cds-WP_016193144.1;Parent=gene-LU631_RS06675;Dbxref=Genbank:WP_016193144.1;Name=WP_016193144.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356909.1;locus_tag=LU631_RS06675;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_016193144.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1305935 1306054 . + . ID=gene-LU631_RS06680;Name=LU631_RS06680;end_range=1306054,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06680;old_locus_tag=LU631_06680;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1305935 1306054 . + 0 ID=cds-LU631_RS06680;Parent=gene-LU631_RS06680;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1306054,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942203.1;locus_tag=LU631_RS06680;partial=true;product=LysE family translocator;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1306097 1306462 . + . ID=gene-LU631_RS06685;Name=LU631_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06685;old_locus_tag=LU631_06685 NZ_CP089940.1 Protein Homology CDS 1306097 1306462 . + 0 ID=cds-WP_016193146.1;Parent=gene-LU631_RS06685;Dbxref=Genbank:WP_016193146.1;Name=WP_016193146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003841963.1;locus_tag=LU631_RS06685;product=HNH endonuclease signature motif containing protein;protein_id=WP_016193146.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1306991 1308637 . - . ID=gene-LU631_RS06690;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=LU631_RS06690;old_locus_tag=LU631_06690 NZ_CP089940.1 Protein Homology CDS 1306991 1308637 . - 0 ID=cds-WP_016193147.1;Parent=gene-LU631_RS06690;Dbxref=Genbank:WP_016193147.1;Name=WP_016193147.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226720.1;locus_tag=LU631_RS06690;product=class I fumarate hydratase FumA;protein_id=WP_016193147.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1308692 1310128 . - . ID=gene-LU631_RS06695;Name=LU631_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06695;old_locus_tag=LU631_06695 NZ_CP089940.1 Protein Homology CDS 1308692 1310128 . - 0 ID=cds-WP_232426939.1;Parent=gene-LU631_RS06695;Dbxref=Genbank:WP_232426939.1;Name=WP_232426939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851326.1;locus_tag=LU631_RS06695;product=anion permease;protein_id=WP_232426939.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1310981 1311678 . + . ID=gene-LU631_RS06700;Name=LU631_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06700;old_locus_tag=LU631_06700 NZ_CP089940.1 Protein Homology CDS 1310981 1311230 . + 0 ID=cds-WP_233481996.1;Parent=gene-LU631_RS06700;Dbxref=Genbank:WP_233481996.1;Name=WP_233481996.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS06700;product=IS1 family transposase;protein_id=WP_233481996.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 1311230 1311678 . + 2 ID=cds-WP_233481996.1;Parent=gene-LU631_RS06700;Dbxref=Genbank:WP_233481996.1;Name=WP_233481996.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS06700;product=IS1 family transposase;protein_id=WP_233481996.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1311743 1312258 . + . ID=gene-LU631_RS06705;Name=LU631_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06705;old_locus_tag=LU631_06705 NZ_CP089940.1 GeneMarkS-2+ CDS 1311743 1312258 . + 0 ID=cds-WP_233480892.1;Parent=gene-LU631_RS06705;Dbxref=Genbank:WP_233480892.1;Name=WP_233480892.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06705;product=hypothetical protein;protein_id=WP_233480892.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1312406 1313086 . + . ID=gene-LU631_RS06710;Name=LU631_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06710;old_locus_tag=LU631_06710 NZ_CP089940.1 GeneMarkS-2+ CDS 1312406 1313086 . + 0 ID=cds-WP_016193150.1;Parent=gene-LU631_RS06710;Dbxref=Genbank:WP_016193150.1;Name=WP_016193150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06710;product=flavocytochrome c;protein_id=WP_016193150.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1313125 1313331 . + . ID=gene-LU631_RS06715;Name=LU631_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06715;old_locus_tag=LU631_06715 NZ_CP089940.1 GeneMarkS-2+ CDS 1313125 1313331 . + 0 ID=cds-WP_016193151.1;Parent=gene-LU631_RS06715;Dbxref=Genbank:WP_016193151.1;Name=WP_016193151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06715;product=FAD-binding protein;protein_id=WP_016193151.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1313350 1313913 . + . ID=gene-LU631_RS06720;Name=LU631_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06720;old_locus_tag=LU631_06720 NZ_CP089940.1 GeneMarkS-2+ CDS 1313350 1313913 . + 0 ID=cds-WP_016193152.1;Parent=gene-LU631_RS06720;Dbxref=Genbank:WP_016193152.1;Name=WP_016193152.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06720;product=FAD-binding protein;protein_id=WP_016193152.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1313979 1314116 . + . ID=gene-LU631_RS06725;Name=LU631_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06725;old_locus_tag=LU631_06725 NZ_CP089940.1 GeneMarkS-2+ CDS 1313979 1314116 . + 0 ID=cds-WP_016193153.1;Parent=gene-LU631_RS06725;Dbxref=Genbank:WP_016193153.1;Name=WP_016193153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06725;product=hypothetical protein;protein_id=WP_016193153.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1314101 1314346 . + . ID=gene-LU631_RS06730;Name=LU631_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06730;old_locus_tag=LU631_06730 NZ_CP089940.1 GeneMarkS-2+ CDS 1314101 1314346 . + 0 ID=cds-WP_016193154.1;Parent=gene-LU631_RS06730;Dbxref=Genbank:WP_016193154.1;Name=WP_016193154.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06730;product=FAD-binding protein;protein_id=WP_016193154.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1314397 1315365 . + . ID=gene-LU631_RS06735;Name=LU631_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06735;old_locus_tag=LU631_06735 NZ_CP089940.1 Protein Homology CDS 1314397 1315365 . + 0 ID=cds-WP_016193155.1;Parent=gene-LU631_RS06735;Dbxref=Genbank:WP_016193155.1;Name=WP_016193155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006176235.1;locus_tag=LU631_RS06735;product=FAD:protein FMN transferase;protein_id=WP_016193155.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1315343 1316066 . - . ID=gene-LU631_RS06740;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=pseudogene;locus_tag=LU631_RS06740;old_locus_tag=LU631_06740;pseudo=true NZ_CP089940.1 Protein Homology CDS 1315343 1316066 . - 0 ID=cds-LU631_RS06740;Parent=gene-LU631_RS06740;Note=frameshifted;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132485.1;locus_tag=LU631_RS06740;product=two-component system response regulator DcuR;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1316063 1316356 . - . ID=gene-LU631_RS06745;Name=LU631_RS06745;end_range=1316356,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06745;old_locus_tag=LU631_06745;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1316063 1316356 . - 0 ID=cds-LU631_RS06745;Parent=gene-LU631_RS06745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1316356,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457055.1;locus_tag=LU631_RS06745;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1316382 1317242 . - . ID=gene-LU631_RS06750;Name=LU631_RS06750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06750;old_locus_tag=LU631_06750;pseudo=true NZ_CP089940.1 Protein Homology CDS 1316382 1317242 . - 0 ID=cds-LU631_RS06750;Parent=gene-LU631_RS06750;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358191.1;locus_tag=LU631_RS06750;product=MurR/RpiR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1317417 1317554 . - . ID=gene-LU631_RS06755;Name=LU631_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06755;old_locus_tag=LU631_06755 NZ_CP089940.1 GeneMarkS-2+ CDS 1317417 1317554 . - 0 ID=cds-WP_157275276.1;Parent=gene-LU631_RS06755;Dbxref=Genbank:WP_157275276.1;Name=WP_157275276.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06755;product=hypothetical protein;protein_id=WP_157275276.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1317630 1318385 . - . ID=gene-LU631_RS06760;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=LU631_RS06760;old_locus_tag=LU631_06760 NZ_CP089940.1 Protein Homology CDS 1317630 1318385 . - 0 ID=cds-WP_016193159.1;Parent=gene-LU631_RS06760;Dbxref=Genbank:WP_016193159.1;Name=WP_016193159.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095301.1;locus_tag=LU631_RS06760;product=HTH-type transcriptional regulator UlaR;protein_id=WP_016193159.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1318491 1319555 . - . ID=gene-LU631_RS06765;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=LU631_RS06765;old_locus_tag=LU631_06765 NZ_CP089940.1 Protein Homology CDS 1318491 1319555 . - 0 ID=cds-WP_016193160.1;Parent=gene-LU631_RS06765;Dbxref=Genbank:WP_016193160.1;Name=WP_016193160.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=LU631_RS06765;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_016193160.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1319941 1320474 . + . ID=gene-LU631_RS06770;Name=LU631_RS06770;end_range=1320474,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06770;old_locus_tag=LU631_06770;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1319941 1320474 . + 0 ID=cds-LU631_RS06770;Parent=gene-LU631_RS06770;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1320474,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264459.1;locus_tag=LU631_RS06770;partial=true;product=PTS ascorbate transporter subunit IIC;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1320626 1321057 . - . ID=gene-LU631_RS26040;Name=LU631_RS26040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26040 NZ_CP089940.1 Protein Homology CDS 1320626 1321057 . - 0 ID=cds-WP_046372013.1-4;Parent=gene-LU631_RS26040;Dbxref=Genbank:WP_046372013.1;Name=WP_046372013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26040;product=IS91 family transposase;protein_id=WP_046372013.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1321069 1321839 . - . ID=gene-LU631_RS26045;Name=LU631_RS26045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26045 NZ_CP089940.1 Protein Homology CDS 1321069 1321839 . - 0 ID=cds-WP_267921497.1-4;Parent=gene-LU631_RS26045;Dbxref=Genbank:WP_267921497.1;Name=WP_267921497.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26045;product=transposase zinc-binding domain-containing protein;protein_id=WP_267921497.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1321848 1321988 . - . ID=gene-LU631_RS06780;Name=LU631_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06780;old_locus_tag=LU631_06780 NZ_CP089940.1 GeneMarkS-2+ CDS 1321848 1321988 . - 0 ID=cds-WP_161796965.1-8;Parent=gene-LU631_RS06780;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06780;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1322374 1323255 . + . ID=gene-LU631_RS06785;Name=LU631_RS06785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06785;old_locus_tag=LU631_06785;partial=true;pseudo=true;start_range=.,1322374 NZ_CP089940.1 Protein Homology CDS 1322374 1323255 . + 0 ID=cds-LU631_RS06785;Parent=gene-LU631_RS06785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091029.1;locus_tag=LU631_RS06785;partial=true;product=PTS ascorbate transporter subunit IIC;pseudo=true;start_range=.,1322374;transl_table=11 NZ_CP089940.1 RefSeq gene 1323288 1323596 . + . ID=gene-LU631_RS06790;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=LU631_RS06790;old_locus_tag=LU631_06790 NZ_CP089940.1 Protein Homology CDS 1323288 1323596 . + 0 ID=cds-WP_016193164.1;Parent=gene-LU631_RS06790;Dbxref=Genbank:WP_016193164.1;Name=WP_016193164.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=LU631_RS06790;product=PTS ascorbate transporter subunit IIB;protein_id=WP_016193164.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1323787 1324266 . + . ID=gene-LU631_RS06795;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=LU631_RS06795;old_locus_tag=LU631_06795 NZ_CP089940.1 Protein Homology CDS 1323787 1324266 . + 0 ID=cds-WP_016193165.1;Parent=gene-LU631_RS06795;Dbxref=Genbank:WP_016193165.1;Name=WP_016193165.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013573566.1;locus_tag=LU631_RS06795;product=PTS ascorbate transporter subunit IIA;protein_id=WP_016193165.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1324282 1324938 . + . ID=gene-LU631_RS06800;Name=LU631_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06800;old_locus_tag=LU631_06800 NZ_CP089940.1 Protein Homology CDS 1324282 1324938 . + 0 ID=cds-WP_016193166.1;Parent=gene-LU631_RS06800;Dbxref=Genbank:WP_016193166.1;Name=WP_016193166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014333496.1;locus_tag=LU631_RS06800;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_016193166.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1324948 1325808 . + . ID=gene-LU631_RS06805;Name=LU631_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06805;old_locus_tag=LU631_06805 NZ_CP089940.1 Protein Homology CDS 1324948 1325808 . + 0 ID=cds-WP_016193167.1;Parent=gene-LU631_RS06805;Dbxref=Genbank:WP_016193167.1;Name=WP_016193167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015704177.1;locus_tag=LU631_RS06805;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_016193167.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1325805 1326494 . + . ID=gene-LU631_RS06810;Name=LU631_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06810;old_locus_tag=LU631_06810 NZ_CP089940.1 Protein Homology CDS 1325805 1326494 . + 0 ID=cds-WP_016193168.1;Parent=gene-LU631_RS06810;Dbxref=Genbank:WP_016193168.1;Name=WP_016193168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014333498.1;locus_tag=LU631_RS06810;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_016193168.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1326655 1327074 . + . ID=gene-LU631_RS06815;Name=LU631_RS06815;end_range=1327074,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06815;old_locus_tag=LU631_06815;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1326655 1327074 . + 0 ID=cds-LU631_RS06815;Parent=gene-LU631_RS06815;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1327074,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015700189.1;locus_tag=LU631_RS06815;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1327147 1327882 . + . ID=gene-LU631_RS06820;Name=LU631_RS06820;end_range=1327882,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06820;old_locus_tag=LU631_06820;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1327147 1327882 . + 0 ID=cds-LU631_RS06820;Parent=gene-LU631_RS06820;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1327882,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315785.1;locus_tag=LU631_RS06820;partial=true;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1327976 1328326 . - . ID=gene-LU631_RS06825;Name=LU631_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06825;old_locus_tag=LU631_06825 NZ_CP089940.1 GeneMarkS-2+ CDS 1327976 1328326 . - 0 ID=cds-WP_046372213.1;Parent=gene-LU631_RS06825;Dbxref=Genbank:WP_046372213.1;Name=WP_046372213.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06825;product=hypothetical protein;protein_id=WP_046372213.1;transl_table=11 NZ_CP089940.1 cmsearch riboswitch 1328767 1328839 . + . ID=id-NZ_CP089940.1:1328767..1328839;Dbxref=RFAM:RF01734;Note=Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride%3B They are found in a wide variety of bacteria and archaea;bound_moiety=fluoride;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP089940.1 RefSeq gene 1328918 1329298 . + . ID=gene-LU631_RS06830;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=LU631_RS06830;old_locus_tag=LU631_06830 NZ_CP089940.1 Protein Homology CDS 1328918 1329298 . + 0 ID=cds-WP_016192839.1;Parent=gene-LU631_RS06830;Dbxref=Genbank:WP_016192839.1;Name=WP_016192839.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156125.1;locus_tag=LU631_RS06830;product=fluoride efflux transporter CrcB;protein_id=WP_016192839.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1329375 1329710 . - . ID=gene-LU631_RS06835;Name=LU631_RS06835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06835;old_locus_tag=LU631_06835;pseudo=true NZ_CP089940.1 Protein Homology CDS 1329375 1329710 . - 0 ID=cds-LU631_RS06835;Parent=gene-LU631_RS06835;Note=internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.2;locus_tag=LU631_RS06835;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1329742 1329882 . - . ID=gene-LU631_RS26050;Name=LU631_RS26050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26050 NZ_CP089940.1 Protein Homology CDS 1329742 1329882 . - 0 ID=cds-WP_252120232.1;Parent=gene-LU631_RS26050;Dbxref=Genbank:WP_252120232.1;Name=WP_252120232.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.2;locus_tag=LU631_RS26050;product=MFS transporter;protein_id=WP_252120232.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1329894 1330190 . - . ID=gene-LU631_RS06840;Name=LU631_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06840;old_locus_tag=LU631_06840 NZ_CP089940.1 Protein Homology CDS 1329894 1330190 . - 0 ID=cds-WP_233481997.1;Parent=gene-LU631_RS06840;Dbxref=Genbank:WP_233481997.1;Name=WP_233481997.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.2;locus_tag=LU631_RS06840;product=MFS transporter;protein_id=WP_233481997.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1330197 1330499 . - . ID=gene-LU631_RS06845;Name=LU631_RS06845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06845;old_locus_tag=LU631_06845;pseudo=true NZ_CP089940.1 Protein Homology CDS 1330197 1330499 . - 0 ID=cds-LU631_RS06845;Parent=gene-LU631_RS06845;Note=internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.2;locus_tag=LU631_RS06845;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1330616 1331032 . - . ID=gene-LU631_RS06850;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS06850;old_locus_tag=LU631_06850 NZ_CP089940.1 Protein Homology CDS 1330616 1331032 . - 0 ID=cds-WP_016192838.1;Parent=gene-LU631_RS06850;Dbxref=Genbank:WP_016192838.1;Name=WP_016192838.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192838.1;locus_tag=LU631_RS06850;product=IS200/IS605 family transposase;protein_id=WP_016192838.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1331055 1332263 . + . ID=gene-LU631_RS06855;Name=LU631_RS06855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06855;old_locus_tag=LU631_06855;pseudo=true NZ_CP089940.1 Protein Homology CDS 1331055 1332263 . + 0 ID=cds-LU631_RS06855;Parent=gene-LU631_RS06855;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368856.1;locus_tag=LU631_RS06855;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1332772 1340064 . + . ID=gene-LU631_RS06860;Name=LU631_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06860;old_locus_tag=LU631_06860 NZ_CP089940.1 Protein Homology CDS 1332772 1340064 . + 0 ID=cds-WP_082103826.1;Parent=gene-LU631_RS06860;Dbxref=Genbank:WP_082103826.1;Name=WP_082103826.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF006608.0;locus_tag=LU631_RS06860;product=type III effector protein XopAD;protein_id=WP_082103826.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1340610 1340759 . + . ID=gene-LU631_RS06865;Name=LU631_RS06865;end_range=1340759,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06865;old_locus_tag=LU631_06865;partial=true;pseudo=true;start_range=.,1340610 NZ_CP089940.1 Protein Homology CDS 1340610 1340759 . + 0 ID=cds-LU631_RS06865;Parent=gene-LU631_RS06865;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1340759,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=LU631_RS06865;partial=true;product=transposase;pseudo=true;start_range=.,1340610;transl_table=11 NZ_CP089940.1 RefSeq gene 1340893 1341948 . - . ID=gene-LU631_RS06870;Name=LU631_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06870;old_locus_tag=LU631_06870 NZ_CP089940.1 Protein Homology CDS 1340893 1341948 . - 0 ID=cds-WP_046372216.1;Parent=gene-LU631_RS06870;Dbxref=Genbank:WP_046372216.1;Name=WP_046372216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888349.1;locus_tag=LU631_RS06870;product=beta-propeller fold lactonase family protein;protein_id=WP_046372216.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1341993 1343213 . - . ID=gene-LU631_RS06875;Name=LU631_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06875;old_locus_tag=LU631_06875 NZ_CP089940.1 Protein Homology CDS 1341993 1343213 . - 0 ID=cds-WP_046371806.1-4;Parent=gene-LU631_RS06875;Dbxref=Genbank:WP_046371806.1;Name=WP_046371806.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025244073.1;locus_tag=LU631_RS06875;product=ISL3 family transposase;protein_id=WP_046371806.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1343319 1343480 . - . ID=gene-LU631_RS06880;Name=LU631_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06880;old_locus_tag=LU631_06880 NZ_CP089940.1 GeneMarkS-2+ CDS 1343319 1343480 . - 0 ID=cds-WP_161796998.1;Parent=gene-LU631_RS06880;Dbxref=Genbank:WP_161796998.1;Name=WP_161796998.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06880;product=hypothetical protein;protein_id=WP_161796998.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1343494 1343670 . - . ID=gene-LU631_RS06885;Name=LU631_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06885;old_locus_tag=LU631_06885 NZ_CP089940.1 GeneMarkS-2+ CDS 1343494 1343670 . - 0 ID=cds-WP_161796999.1;Parent=gene-LU631_RS06885;Dbxref=Genbank:WP_161796999.1;Name=WP_161796999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06885;product=hypothetical protein;protein_id=WP_161796999.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1343933 1344529 . - . ID=gene-LU631_RS06890;Name=LU631_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06890;old_locus_tag=LU631_06890 NZ_CP089940.1 Protein Homology CDS 1343933 1344529 . - 0 ID=cds-WP_016193254.1;Parent=gene-LU631_RS06890;Dbxref=Genbank:WP_016193254.1;Name=WP_016193254.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121032.1;locus_tag=LU631_RS06890;product=YhgN family NAAT transporter;protein_id=WP_016193254.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1344797 1345906 . + . ID=gene-LU631_RS06895;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=LU631_RS06895;old_locus_tag=LU631_06895 NZ_CP089940.1 Protein Homology CDS 1344797 1345906 . + 0 ID=cds-WP_016193253.1;Parent=gene-LU631_RS06895;Dbxref=Genbank:WP_016193253.1;Name=WP_016193253.1;Ontology_term=GO:0009089,GO:0004073;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160770.1;locus_tag=LU631_RS06895;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_016193253.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1345999 1346696 . + . ID=gene-LU631_RS06900;Name=LU631_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06900;old_locus_tag=LU631_06900 NZ_CP089940.1 Protein Homology CDS 1345999 1346248 . + 0 ID=cds-WP_233481998.1;Parent=gene-LU631_RS06900;Dbxref=Genbank:WP_233481998.1;Name=WP_233481998.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS06900;product=IS1 family transposase;protein_id=WP_233481998.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 1346248 1346696 . + 2 ID=cds-WP_233481998.1;Parent=gene-LU631_RS06900;Dbxref=Genbank:WP_233481998.1;Name=WP_233481998.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS06900;product=IS1 family transposase;protein_id=WP_233481998.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1346824 1347099 . - . ID=gene-LU631_RS06905;Name=LU631_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06905;old_locus_tag=LU631_06905 NZ_CP089940.1 Protein Homology CDS 1346824 1347099 . - 0 ID=cds-WP_016192653.1;Parent=gene-LU631_RS06905;Dbxref=Genbank:WP_016192653.1;Name=WP_016192653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009618209.1;locus_tag=LU631_RS06905;product=type II toxin-antitoxin system mRNA interferase toxin%2C RelE/StbE family;protein_id=WP_016192653.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1347086 1347286 . - . ID=gene-LU631_RS06910;Name=LU631_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06910;old_locus_tag=LU631_06910 NZ_CP089940.1 Protein Homology CDS 1347086 1347286 . - 0 ID=cds-WP_016192654.1;Parent=gene-LU631_RS06910;Dbxref=Genbank:WP_016192654.1;Name=WP_016192654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318280.1;locus_tag=LU631_RS06910;product=hypothetical protein;protein_id=WP_016192654.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1347583 1347936 . + . ID=gene-LU631_RS06915;Name=LU631_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06915;old_locus_tag=LU631_06915 NZ_CP089940.1 Protein Homology CDS 1347583 1347936 . + 0 ID=cds-WP_016192655.1;Parent=gene-LU631_RS06915;Dbxref=Genbank:WP_016192655.1;Name=WP_016192655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001242998.1;locus_tag=LU631_RS06915;product=RAQPRD family integrative conjugative element protein;protein_id=WP_016192655.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1347937 1348065 . + . ID=gene-LU631_RS06920;Name=LU631_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06920;old_locus_tag=LU631_06920 NZ_CP089940.1 Protein Homology CDS 1347937 1348065 . + 0 ID=cds-WP_016192656.1;Parent=gene-LU631_RS06920;Dbxref=Genbank:WP_016192656.1;Name=WP_016192656.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023090.2;locus_tag=LU631_RS06920;product=DUF3262 family protein;protein_id=WP_016192656.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1348102 1348479 . + . ID=gene-LU631_RS06925;Name=LU631_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06925;old_locus_tag=LU631_06925 NZ_CP089940.1 Protein Homology CDS 1348102 1348479 . + 0 ID=cds-WP_016192657.1;Parent=gene-LU631_RS06925;Dbxref=Genbank:WP_016192657.1;Name=WP_016192657.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004150882.1;locus_tag=LU631_RS06925;product=TIGR03745 family integrating conjugative element membrane protein;protein_id=WP_016192657.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1348491 1348580 . + . ID=gene-LU631_RS06930;Name=LU631_RS06930;end_range=1348580,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06930;old_locus_tag=LU631_06930;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1348491 1348580 . + 0 ID=cds-LU631_RS06930;Parent=gene-LU631_RS06930;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1348580,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228805.1;locus_tag=LU631_RS06930;partial=true;product=DUF3487 family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1348666 1349544 . + . ID=gene-LU631_RS06935;Name=LU631_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06935;old_locus_tag=LU631_06935 NZ_CP089940.1 Protein Homology CDS 1348666 1349544 . + 0 ID=cds-WP_016192659.1;Parent=gene-LU631_RS06935;Dbxref=Genbank:WP_016192659.1;Name=WP_016192659.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192745.1;locus_tag=LU631_RS06935;product=TIGR03749 family integrating conjugative element protein;protein_id=WP_016192659.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1349541 1351055 . + . ID=gene-LU631_RS06940;Name=LU631_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06940;old_locus_tag=LU631_06940 NZ_CP089940.1 Protein Homology CDS 1349541 1351055 . + 0 ID=cds-WP_152664262.1;Parent=gene-LU631_RS06940;Dbxref=Genbank:WP_152664262.1;Name=WP_152664262.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539520.1;locus_tag=LU631_RS06940;product=TIGR03752 family integrating conjugative element protein;protein_id=WP_152664262.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1351067 1351327 . + . ID=gene-LU631_RS06945;Name=LU631_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06945;old_locus_tag=LU631_06945 NZ_CP089940.1 Protein Homology CDS 1351067 1351327 . + 0 ID=cds-WP_016193251.1;Parent=gene-LU631_RS06945;Dbxref=Genbank:WP_016193251.1;Name=WP_016193251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192003.1;locus_tag=LU631_RS06945;product=hypothetical protein;protein_id=WP_016193251.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1351314 1351718 . + . ID=gene-LU631_RS06950;Name=LU631_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06950;old_locus_tag=LU631_06950 NZ_CP089940.1 Protein Homology CDS 1351314 1351718 . + 0 ID=cds-WP_016193250.1;Parent=gene-LU631_RS06950;Dbxref=Genbank:WP_016193250.1;Name=WP_016193250.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192002.1;locus_tag=LU631_RS06950;product=TIGR03751 family conjugal transfer lipoprotein;protein_id=WP_016193250.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1351718 1354537 . + . ID=gene-LU631_RS06955;Name=LU631_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06955;old_locus_tag=LU631_06955 NZ_CP089940.1 Protein Homology CDS 1351718 1354537 . + 0 ID=cds-WP_046372218.1;Parent=gene-LU631_RS06955;Dbxref=Genbank:WP_046372218.1;Name=WP_046372218.1;Ontology_term=GO:0008150,GO:0005524,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=ATP binding|0005524||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012822421.1;locus_tag=LU631_RS06955;product=conjugative transfer ATPase;protein_id=WP_046372218.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1354534 1354938 . + . ID=gene-LU631_RS06960;Name=LU631_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06960;old_locus_tag=LU631_06960 NZ_CP089940.1 Protein Homology CDS 1354534 1354938 . + 0 ID=cds-WP_016192662.1;Parent=gene-LU631_RS06960;Dbxref=Genbank:WP_016192662.1;Name=WP_016192662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192058.1;locus_tag=LU631_RS06960;product=hypothetical protein;protein_id=WP_016192662.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1355150 1355656 . - . ID=gene-LU631_RS06965;Name=LU631_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06965;old_locus_tag=LU631_06965 NZ_CP089940.1 Protein Homology CDS 1355150 1355656 . - 0 ID=cds-WP_046372219.1;Parent=gene-LU631_RS06965;Dbxref=Genbank:WP_046372219.1;Name=WP_046372219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000654195.1;locus_tag=LU631_RS06965;product=YrhA family protein;protein_id=WP_046372219.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1355666 1356325 . - . ID=gene-LU631_RS06970;Name=LU631_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06970;old_locus_tag=LU631_06970 NZ_CP089940.1 GeneMarkS-2+ CDS 1355666 1356325 . - 0 ID=cds-WP_040465833.1;Parent=gene-LU631_RS06970;Dbxref=Genbank:WP_040465833.1;Name=WP_040465833.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06970;product=HNH endonuclease;protein_id=WP_040465833.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1356702 1357916 . - . ID=gene-LU631_RS06975;Name=LU631_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06975;old_locus_tag=LU631_06975 NZ_CP089940.1 Protein Homology CDS 1356702 1357916 . - 0 ID=cds-WP_046371879.1-9;Parent=gene-LU631_RS06975;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS06975;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1357925 1358260 . - . ID=gene-LU631_RS06980;Name=LU631_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06980;old_locus_tag=LU631_06980 NZ_CP089940.1 GeneMarkS-2+ CDS 1357925 1358260 . - 0 ID=cds-WP_052734695.1-5;Parent=gene-LU631_RS06980;Dbxref=Genbank:WP_052734695.1;Name=WP_052734695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS06980;product=hypothetical protein;protein_id=WP_052734695.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1358454 1358678 . + . ID=gene-LU631_RS06985;Name=LU631_RS06985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS06985;old_locus_tag=LU631_06985;partial=true;pseudo=true;start_range=.,1358454 NZ_CP089940.1 Protein Homology CDS 1358454 1358678 . + 0 ID=cds-LU631_RS06985;Parent=gene-LU631_RS06985;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010891053.1;locus_tag=LU631_RS06985;partial=true;product=mobilization protein MobX;pseudo=true;start_range=.,1358454;transl_table=11 NZ_CP089940.1 RefSeq gene 1358791 1359642 . - . ID=gene-LU631_RS06990;Name=LU631_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06990;old_locus_tag=LU631_06990 NZ_CP089940.1 Protein Homology CDS 1358791 1359642 . - 0 ID=cds-WP_016192667.1;Parent=gene-LU631_RS06990;Dbxref=Genbank:WP_016192667.1;Name=WP_016192667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517644.1;locus_tag=LU631_RS06990;product=SDR family oxidoreductase;protein_id=WP_016192667.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1359744 1360136 . + . ID=gene-LU631_RS06995;Name=LU631_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS06995;old_locus_tag=LU631_06995 NZ_CP089940.1 Protein Homology CDS 1359744 1360136 . + 0 ID=cds-WP_016192668.1;Parent=gene-LU631_RS06995;Dbxref=Genbank:WP_016192668.1;Name=WP_016192668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017348651.1;locus_tag=LU631_RS06995;product=helix-turn-helix domain-containing protein;protein_id=WP_016192668.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1360386 1361405 . + . ID=gene-LU631_RS07000;Name=LU631_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07000;old_locus_tag=LU631_07000 NZ_CP089940.1 Protein Homology CDS 1360386 1361405 . + 0 ID=cds-WP_016192670.1;Parent=gene-LU631_RS07000;Dbxref=Genbank:WP_016192670.1;Name=WP_016192670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010284496.1;locus_tag=LU631_RS07000;product=alpha/beta hydrolase-fold protein;protein_id=WP_016192670.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1361587 1361844 . - . ID=gene-LU631_RS07005;Name=LU631_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07005;old_locus_tag=LU631_07005 NZ_CP089940.1 GeneMarkS-2+ CDS 1361587 1361844 . - 0 ID=cds-WP_016192671.1;Parent=gene-LU631_RS07005;Dbxref=Genbank:WP_016192671.1;Name=WP_016192671.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS07005;product=hypothetical protein;protein_id=WP_016192671.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1362058 1362573 . - . ID=gene-LU631_RS07010;Name=LU631_RS07010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS07010;old_locus_tag=LU631_07010;partial=true;pseudo=true;start_range=.,1362058 NZ_CP089940.1 Protein Homology CDS 1362058 1362573 . - 0 ID=cds-LU631_RS07010;Parent=gene-LU631_RS07010;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001312291.1;locus_tag=LU631_RS07010;partial=true;product=class I SAM-dependent methyltransferase;pseudo=true;start_range=.,1362058;transl_table=11 NZ_CP089940.1 RefSeq gene 1362566 1362841 . - . ID=gene-LU631_RS07015;Name=LU631_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07015;old_locus_tag=LU631_07015 NZ_CP089940.1 GeneMarkS-2+ CDS 1362566 1362841 . - 0 ID=cds-WP_016192673.1;Parent=gene-LU631_RS07015;Dbxref=Genbank:WP_016192673.1;Name=WP_016192673.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS07015;product=hypothetical protein;protein_id=WP_016192673.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1362834 1363112 . - . ID=gene-LU631_RS07020;Name=LU631_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07020;old_locus_tag=LU631_07020 NZ_CP089940.1 GeneMarkS-2+ CDS 1362834 1363112 . - 0 ID=cds-WP_016192674.1;Parent=gene-LU631_RS07020;Dbxref=Genbank:WP_016192674.1;Name=WP_016192674.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS07020;product=hypothetical protein;protein_id=WP_016192674.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1363150 1363413 . - . ID=gene-LU631_RS07025;Name=LU631_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07025;old_locus_tag=LU631_07025 NZ_CP089940.1 Protein Homology CDS 1363150 1363413 . - 0 ID=cds-WP_016192675.1;Parent=gene-LU631_RS07025;Dbxref=Genbank:WP_016192675.1;Name=WP_016192675.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012354.2;locus_tag=LU631_RS07025;product=LysR family transcriptional regulator;protein_id=WP_016192675.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1364094 1364657 . - . ID=gene-LU631_RS07030;Name=LU631_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07030;old_locus_tag=LU631_07030 NZ_CP089940.1 Protein Homology CDS 1364094 1364657 . - 0 ID=cds-WP_016192677.1;Parent=gene-LU631_RS07030;Dbxref=Genbank:WP_016192677.1;Name=WP_016192677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000733561.1;locus_tag=LU631_RS07030;product=hypothetical protein;protein_id=WP_016192677.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1364766 1365734 . - . ID=gene-LU631_RS07035;Name=LU631_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07035;old_locus_tag=LU631_07035 NZ_CP089940.1 Protein Homology CDS 1364766 1365734 . - 0 ID=cds-WP_016192678.1;Parent=gene-LU631_RS07035;Dbxref=Genbank:WP_016192678.1;Name=WP_016192678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192678.1;locus_tag=LU631_RS07035;product=hypothetical protein;protein_id=WP_016192678.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1366114 1366746 . + . ID=gene-LU631_RS07040;Name=LU631_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07040;old_locus_tag=LU631_07040 NZ_CP089940.1 Protein Homology CDS 1366114 1366746 . + 0 ID=cds-WP_016192680.1;Parent=gene-LU631_RS07040;Dbxref=Genbank:WP_016192680.1;Name=WP_016192680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593759.1;locus_tag=LU631_RS07040;product=AHL-synthase EanI;protein_id=WP_016192680.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1366718 1367473 . - . ID=gene-LU631_RS07045;Name=LU631_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07045;old_locus_tag=LU631_07045 NZ_CP089940.1 Protein Homology CDS 1366718 1367473 . - 0 ID=cds-WP_040465835.1;Parent=gene-LU631_RS07045;Dbxref=Genbank:WP_040465835.1;Name=WP_040465835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006119203.1;locus_tag=LU631_RS07045;product=LuxR family transcriptional regulator;protein_id=WP_040465835.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1368230 1368769 . - . ID=gene-LU631_RS07050;Name=LU631_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07050;old_locus_tag=LU631_07050 NZ_CP089940.1 Protein Homology CDS 1368230 1368769 . - 0 ID=cds-WP_016192683.1;Parent=gene-LU631_RS07050;Dbxref=Genbank:WP_016192683.1;Name=WP_016192683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666838.1;locus_tag=LU631_RS07050;product=hypothetical protein;protein_id=WP_016192683.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1368971 1370464 . + . ID=gene-LU631_RS07055;Name=LU631_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07055;old_locus_tag=LU631_07055 NZ_CP089940.1 Protein Homology CDS 1368971 1370464 . + 0 ID=cds-WP_040465855.1;Parent=gene-LU631_RS07055;Dbxref=Genbank:WP_040465855.1;Name=WP_040465855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669241.1;locus_tag=LU631_RS07055;product=TraI domain-containing protein;protein_id=WP_040465855.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1370499 1371458 . + . ID=gene-LU631_RS07060;Name=LU631_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07060;old_locus_tag=LU631_07060 NZ_CP089940.1 Protein Homology CDS 1370499 1371458 . + 0 ID=cds-WP_040465836.1;Parent=gene-LU631_RS07060;Dbxref=Genbank:WP_040465836.1;Name=WP_040465836.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666840.1;locus_tag=LU631_RS07060;product=site-specific integrase;protein_id=WP_040465836.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1371849 1372736 . + . ID=gene-LU631_RS07065;Name=LU631_RS07065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS07065;old_locus_tag=LU631_07065;pseudo=true NZ_CP089940.1 Protein Homology CDS 1371849 1372736 . + 0 ID=cds-LU631_RS07065;Parent=gene-LU631_RS07065;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105617.1;locus_tag=LU631_RS07065;product=ParA family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1372729 1374096 . + . ID=gene-LU631_RS07070;Name=dnaB-PI;gbkey=Gene;gene=dnaB-PI;gene_biotype=protein_coding;locus_tag=LU631_RS07070;old_locus_tag=LU631_07070 NZ_CP089940.1 Protein Homology CDS 1372729 1374096 . + 0 ID=cds-WP_016192687.1;Parent=gene-LU631_RS07070;Dbxref=Genbank:WP_016192687.1;Name=WP_016192687.1;gbkey=CDS;gene=dnaB-PI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606867.1;locus_tag=LU631_RS07070;product=SPI-7-type island replicative DNA helicase;protein_id=WP_016192687.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1374093 1375859 . + . ID=gene-LU631_RS07075;Name=LU631_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07075;old_locus_tag=LU631_07075 NZ_CP089940.1 Protein Homology CDS 1374093 1375859 . + 0 ID=cds-WP_016192688.1;Parent=gene-LU631_RS07075;Dbxref=Genbank:WP_016192688.1;Name=WP_016192688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105615.1;locus_tag=LU631_RS07075;product=ParB family protein;protein_id=WP_016192688.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1375852 1376109 . + . ID=gene-LU631_RS07080;Name=LU631_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07080;old_locus_tag=LU631_07080 NZ_CP089940.1 Protein Homology CDS 1375852 1376109 . + 0 ID=cds-WP_016192689.1;Parent=gene-LU631_RS07080;Dbxref=Genbank:WP_016192689.1;Name=WP_016192689.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372573.1;locus_tag=LU631_RS07080;product=TraR/DksA C4-type zinc finger protein;protein_id=WP_016192689.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1376099 1376839 . + . ID=gene-LU631_RS07085;Name=LU631_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07085;old_locus_tag=LU631_07085 NZ_CP089940.1 Protein Homology CDS 1376099 1376839 . + 0 ID=cds-WP_016192690.1;Parent=gene-LU631_RS07085;Dbxref=Genbank:WP_016192690.1;Name=WP_016192690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095147.1;locus_tag=LU631_RS07085;product=DUF2786 domain-containing protein;protein_id=WP_016192690.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1376924 1377520 . + . ID=gene-LU631_RS07090;Name=LU631_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07090;old_locus_tag=LU631_07090 NZ_CP089940.1 Protein Homology CDS 1376924 1377520 . + 0 ID=cds-WP_016192691.1;Parent=gene-LU631_RS07090;Dbxref=Genbank:WP_016192691.1;Name=WP_016192691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372575.1;locus_tag=LU631_RS07090;product=DUF2857 domain-containing protein;protein_id=WP_016192691.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1377517 1377750 . + . ID=gene-LU631_RS07095;Name=LU631_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07095;old_locus_tag=LU631_07095 NZ_CP089940.1 Protein Homology CDS 1377517 1377750 . + 0 ID=cds-WP_232426921.1;Parent=gene-LU631_RS07095;Dbxref=Genbank:WP_232426921.1;Name=WP_232426921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219499.1;locus_tag=LU631_RS07095;product=hypothetical protein;protein_id=WP_232426921.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1377829 1379064 . + . ID=gene-LU631_RS07100;Name=LU631_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07100;old_locus_tag=LU631_07100 NZ_CP089940.1 Protein Homology CDS 1377829 1379064 . + 0 ID=cds-WP_016192693.1;Parent=gene-LU631_RS07100;Dbxref=Genbank:WP_016192693.1;Name=WP_016192693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012822375.1;locus_tag=LU631_RS07100;product=STY4528 family pathogenicity island replication protein;protein_id=WP_016192693.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1379392 1380111 . + . ID=gene-LU631_RS07105;Name=LU631_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07105;old_locus_tag=LU631_07105 NZ_CP089940.1 Protein Homology CDS 1379392 1380111 . + 0 ID=cds-WP_016192694.1;Parent=gene-LU631_RS07105;Dbxref=Genbank:WP_016192694.1;Name=WP_016192694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542455.1;locus_tag=LU631_RS07105;product=TIGR03761 family integrating conjugative element protein;protein_id=WP_016192694.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1380128 1381774 . + . ID=gene-LU631_RS07110;Name=LU631_RS07110;end_range=1381774,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS07110;old_locus_tag=LU631_07110;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1380128 1381774 . + 0 ID=cds-LU631_RS07110;Parent=gene-LU631_RS07110;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1381774,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105610.1;locus_tag=LU631_RS07110;partial=true;product=DNA topoisomerase III;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1381923 1382963 . + . ID=gene-LU631_RS07115;Name=LU631_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07115;old_locus_tag=LU631_07115 NZ_CP089940.1 Protein Homology CDS 1381923 1382963 . + 0 ID=cds-WP_046371813.1-5;Parent=gene-LU631_RS07115;Dbxref=Genbank:WP_046371813.1;Name=WP_046371813.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS07115;product=IS481 family transposase;protein_id=WP_046371813.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1383205 1383441 . + . ID=gene-LU631_RS07120;Name=LU631_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07120;old_locus_tag=LU631_07120 NZ_CP089940.1 Protein Homology CDS 1383205 1383441 . + 0 ID=cds-WP_040465837.1;Parent=gene-LU631_RS07120;Dbxref=Genbank:WP_040465837.1;Name=WP_040465837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322732.1;locus_tag=LU631_RS07120;product=hypothetical protein;protein_id=WP_040465837.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1383410 1384195 . - . ID=gene-LU631_RS07125;Name=LU631_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07125;old_locus_tag=LU631_07125 NZ_CP089940.1 Protein Homology CDS 1383410 1384195 . - 0 ID=cds-WP_016192697.1;Parent=gene-LU631_RS07125;Dbxref=Genbank:WP_016192697.1;Name=WP_016192697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192697.1;locus_tag=LU631_RS07125;product=DNA adenine methylase;protein_id=WP_016192697.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1384322 1384906 . + . ID=gene-LU631_RS07130;Name=LU631_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07130;old_locus_tag=LU631_07130 NZ_CP089940.1 Protein Homology CDS 1384322 1384906 . + 0 ID=cds-WP_016192698.1;Parent=gene-LU631_RS07130;Dbxref=Genbank:WP_016192698.1;Name=WP_016192698.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025953.2;locus_tag=LU631_RS07130;product=sugar O-acetyltransferase;protein_id=WP_016192698.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1384976 1385128 . - . ID=gene-LU631_RS07135;Name=LU631_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07135;old_locus_tag=LU631_07135 NZ_CP089940.1 Protein Homology CDS 1384976 1385128 . - 0 ID=cds-WP_016192699.1;Parent=gene-LU631_RS07135;Dbxref=Genbank:WP_016192699.1;Name=WP_016192699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001213059.1;locus_tag=LU631_RS07135;product=DUF1378 family protein;protein_id=WP_016192699.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1385203 1385373 . - . ID=gene-LU631_RS07140;Name=LU631_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07140;old_locus_tag=LU631_07140 NZ_CP089940.1 Protein Homology CDS 1385203 1385373 . - 0 ID=cds-WP_152664264.1;Parent=gene-LU631_RS07140;Dbxref=Genbank:WP_152664264.1;Name=WP_152664264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533411.1;locus_tag=LU631_RS07140;product=DUF826 domain-containing protein;protein_id=WP_152664264.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1385461 1386033 . - . ID=gene-LU631_RS07145;Name=LU631_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07145;old_locus_tag=LU631_07145 NZ_CP089940.1 Protein Homology CDS 1385461 1386033 . - 0 ID=cds-WP_016192701.1;Parent=gene-LU631_RS07145;Dbxref=Genbank:WP_016192701.1;Name=WP_016192701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143175.1;locus_tag=LU631_RS07145;product=tail assembly chaperone;protein_id=WP_016192701.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1386030 1386698 . - . ID=gene-LU631_RS07150;Name=LU631_RS07150;end_range=1386698,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS07150;old_locus_tag=LU631_07150;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1386030 1386698 . - 0 ID=cds-LU631_RS07150;Parent=gene-LU631_RS07150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1386698,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083765.1;locus_tag=LU631_RS07150;partial=true;product=phage tail protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1386956 1387537 . - . ID=gene-LU631_RS07155;Name=LU631_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07155;old_locus_tag=LU631_07155 NZ_CP089940.1 Protein Homology CDS 1386956 1387537 . - 0 ID=cds-WP_016192703.1;Parent=gene-LU631_RS07155;Dbxref=Genbank:WP_016192703.1;Name=WP_016192703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088799.1;locus_tag=LU631_RS07155;product=DUF2313 domain-containing protein;protein_id=WP_016192703.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1387534 1388604 . - . ID=gene-LU631_RS07160;Name=LU631_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07160;old_locus_tag=LU631_07160 NZ_CP089940.1 Protein Homology CDS 1387534 1388604 . - 0 ID=cds-WP_016192704.1;Parent=gene-LU631_RS07160;Dbxref=Genbank:WP_016192704.1;Name=WP_016192704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088801.1;locus_tag=LU631_RS07160;product=baseplate J/gp47 family protein;protein_id=WP_016192704.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1388615 1388965 . - . ID=gene-LU631_RS07165;Name=LU631_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07165;old_locus_tag=LU631_07165 NZ_CP089940.1 Protein Homology CDS 1388615 1388965 . - 0 ID=cds-WP_016192705.1;Parent=gene-LU631_RS07165;Dbxref=Genbank:WP_016192705.1;Name=WP_016192705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088802.1;locus_tag=LU631_RS07165;product=phage GP46 family protein;protein_id=WP_016192705.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1389051 1389716 . - . ID=gene-LU631_RS07170;Name=LU631_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07170;old_locus_tag=LU631_07170 NZ_CP089940.1 Protein Homology CDS 1389051 1389716 . - 0 ID=cds-WP_016192706.1;Parent=gene-LU631_RS07170;Dbxref=Genbank:WP_016192706.1;Name=WP_016192706.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088803.1;locus_tag=LU631_RS07170;product=phage baseplate assembly protein V;protein_id=WP_016192706.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1389709 1390827 . - . ID=gene-LU631_RS07175;Name=LU631_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07175;old_locus_tag=LU631_07175 NZ_CP089940.1 Protein Homology CDS 1389709 1390827 . - 0 ID=cds-WP_016192707.1;Parent=gene-LU631_RS07175;Dbxref=Genbank:WP_016192707.1;Name=WP_016192707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088804.1;locus_tag=LU631_RS07175;product=phage tail protein;protein_id=WP_016192707.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1390811 1392130 . - . ID=gene-LU631_RS07180;Name=LU631_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07180;old_locus_tag=LU631_07180 NZ_CP089940.1 Protein Homology CDS 1390811 1392130 . - 0 ID=cds-WP_016192708.1;Parent=gene-LU631_RS07180;Dbxref=Genbank:WP_016192708.1;Name=WP_016192708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088805.1;locus_tag=LU631_RS07180;product=DNA circularization N-terminal domain-containing protein;protein_id=WP_016192708.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1392130 1394430 . - . ID=gene-LU631_RS07185;Name=LU631_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07185;old_locus_tag=LU631_07185 NZ_CP089940.1 Protein Homology CDS 1392130 1394430 . - 0 ID=cds-WP_016192709.1;Parent=gene-LU631_RS07185;Dbxref=Genbank:WP_016192709.1;Name=WP_016192709.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088807.1;locus_tag=LU631_RS07185;product=phage tail tape measure protein;protein_id=WP_016192709.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1394565 1394954 . - . ID=gene-LU631_RS07190;Name=LU631_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07190;old_locus_tag=LU631_07190 NZ_CP089940.1 Protein Homology CDS 1394565 1394954 . - 0 ID=cds-WP_016192710.1;Parent=gene-LU631_RS07190;Dbxref=Genbank:WP_016192710.1;Name=WP_016192710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192710.1;locus_tag=LU631_RS07190;product=hypothetical protein;protein_id=WP_016192710.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1394954 1395322 . - . ID=gene-LU631_RS07195;Name=LU631_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07195;old_locus_tag=LU631_07195 NZ_CP089940.1 Protein Homology CDS 1394954 1395322 . - 0 ID=cds-WP_016192711.1;Parent=gene-LU631_RS07195;Dbxref=Genbank:WP_016192711.1;Name=WP_016192711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192711.1;locus_tag=LU631_RS07195;product=hypothetical protein;protein_id=WP_016192711.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1395333 1396784 . - . ID=gene-LU631_RS07200;Name=LU631_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07200;old_locus_tag=LU631_07200 NZ_CP089940.1 Protein Homology CDS 1395333 1396784 . - 0 ID=cds-WP_016192712.1;Parent=gene-LU631_RS07200;Dbxref=Genbank:WP_016192712.1;Name=WP_016192712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192712.1;locus_tag=LU631_RS07200;product=phage sheath protein;protein_id=WP_016192712.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1396781 1397026 . - . ID=gene-LU631_RS07205;Name=LU631_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07205;old_locus_tag=LU631_07205 NZ_CP089940.1 Protein Homology CDS 1396781 1397026 . - 0 ID=cds-WP_016192713.1;Parent=gene-LU631_RS07205;Dbxref=Genbank:WP_016192713.1;Name=WP_016192713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088820.1;locus_tag=LU631_RS07205;product=DUF2635 domain-containing protein;protein_id=WP_016192713.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1397019 1397669 . - . ID=gene-LU631_RS07210;Name=LU631_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07210;old_locus_tag=LU631_07210 NZ_CP089940.1 Protein Homology CDS 1397019 1397669 . - 0 ID=cds-WP_016192714.1;Parent=gene-LU631_RS07210;Dbxref=Genbank:WP_016192714.1;Name=WP_016192714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088823.1;locus_tag=LU631_RS07210;product=DUF1834 family protein;protein_id=WP_016192714.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1397669 1398109 . - . ID=gene-LU631_RS07215;Name=LU631_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07215;old_locus_tag=LU631_07215 NZ_CP089940.1 Protein Homology CDS 1397669 1398109 . - 0 ID=cds-WP_016192715.1;Parent=gene-LU631_RS07215;Dbxref=Genbank:WP_016192715.1;Name=WP_016192715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088826.1;locus_tag=LU631_RS07215;product=DUF1320 family protein;protein_id=WP_016192715.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1398112 1399023 . - . ID=gene-LU631_RS07220;Name=LU631_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07220;old_locus_tag=LU631_07220 NZ_CP089940.1 Protein Homology CDS 1398112 1399023 . - 0 ID=cds-WP_040465838.1;Parent=gene-LU631_RS07220;Dbxref=Genbank:WP_040465838.1;Name=WP_040465838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088829.1;locus_tag=LU631_RS07220;product=Mu-like prophage major head subunit gpT family protein;protein_id=WP_040465838.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1399042 1399473 . - . ID=gene-LU631_RS07225;Name=LU631_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07225;old_locus_tag=LU631_07225 NZ_CP089940.1 Protein Homology CDS 1399042 1399473 . - 0 ID=cds-WP_016192717.1;Parent=gene-LU631_RS07225;Dbxref=Genbank:WP_016192717.1;Name=WP_016192717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192717.1;locus_tag=LU631_RS07225;product=hypothetical protein;protein_id=WP_016192717.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1399470 1400555 . - . ID=gene-LU631_RS07230;Name=LU631_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07230;old_locus_tag=LU631_07230 NZ_CP089940.1 Protein Homology CDS 1399470 1400555 . - 0 ID=cds-WP_016192718.1;Parent=gene-LU631_RS07230;Dbxref=Genbank:WP_016192718.1;Name=WP_016192718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088834.1;locus_tag=LU631_RS07230;product=phage protease;protein_id=WP_016192718.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1400807 1401283 . - . ID=gene-LU631_RS07235;Name=LU631_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07235;old_locus_tag=LU631_07235 NZ_CP089940.1 Protein Homology CDS 1400807 1401283 . - 0 ID=cds-WP_016192719.1;Parent=gene-LU631_RS07235;Dbxref=Genbank:WP_016192719.1;Name=WP_016192719.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088837.1;locus_tag=LU631_RS07235;product=phage virion morphogenesis protein;protein_id=WP_016192719.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1401280 1402536 . - . ID=gene-LU631_RS07240;Name=LU631_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07240;old_locus_tag=LU631_07240 NZ_CP089940.1 Protein Homology CDS 1401280 1402536 . - 0 ID=cds-WP_016192720.1;Parent=gene-LU631_RS07240;Dbxref=Genbank:WP_016192720.1;Name=WP_016192720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088840.1;locus_tag=LU631_RS07240;product=phage head morphogenesis protein;protein_id=WP_016192720.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1402529 1404088 . - . ID=gene-LU631_RS07245;Name=LU631_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07245;old_locus_tag=LU631_07245 NZ_CP089940.1 Protein Homology CDS 1402529 1404088 . - 0 ID=cds-WP_016192721.1;Parent=gene-LU631_RS07245;Dbxref=Genbank:WP_016192721.1;Name=WP_016192721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088844.1;locus_tag=LU631_RS07245;product=DUF935 family protein;protein_id=WP_016192721.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1404089 1405777 . - . ID=gene-LU631_RS07250;Name=terL;gbkey=Gene;gene=terL;gene_biotype=protein_coding;locus_tag=LU631_RS07250;old_locus_tag=LU631_07250 NZ_CP089940.1 Protein Homology CDS 1404089 1405777 . - 0 ID=cds-WP_016192722.1;Parent=gene-LU631_RS07250;Dbxref=Genbank:WP_016192722.1;Name=WP_016192722.1;gbkey=CDS;gene=terL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088847.1;locus_tag=LU631_RS07250;product=phage terminase large subunit;protein_id=WP_016192722.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1405788 1406018 . - . ID=gene-LU631_RS07255;Name=LU631_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07255;old_locus_tag=LU631_07255 NZ_CP089940.1 Protein Homology CDS 1405788 1406018 . - 0 ID=cds-WP_016192723.1;Parent=gene-LU631_RS07255;Dbxref=Genbank:WP_016192723.1;Name=WP_016192723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169768.1;locus_tag=LU631_RS07255;product=hypothetical protein;protein_id=WP_016192723.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1406011 1406532 . - . ID=gene-LU631_RS07260;Name=LU631_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07260;old_locus_tag=LU631_07260 NZ_CP089940.1 Protein Homology CDS 1406011 1406532 . - 0 ID=cds-WP_016192724.1;Parent=gene-LU631_RS07260;Dbxref=Genbank:WP_016192724.1;Name=WP_016192724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088853.1;locus_tag=LU631_RS07260;product=DUF1804 family protein;protein_id=WP_016192724.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1406532 1406798 . - . ID=gene-LU631_RS07265;Name=LU631_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07265;old_locus_tag=LU631_07265 NZ_CP089940.1 Protein Homology CDS 1406532 1406798 . - 0 ID=cds-WP_016169770.1;Parent=gene-LU631_RS07265;Dbxref=Genbank:WP_016169770.1;Name=WP_016169770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169770.1;locus_tag=LU631_RS07265;product=hypothetical protein;protein_id=WP_016169770.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1406801 1406962 . - . ID=gene-LU631_RS07270;Name=LU631_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07270;old_locus_tag=LU631_07270 NZ_CP089940.1 Protein Homology CDS 1406801 1406962 . - 0 ID=cds-WP_233481999.1;Parent=gene-LU631_RS07270;Dbxref=Genbank:WP_233481999.1;Name=WP_233481999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118109.1;locus_tag=LU631_RS07270;product=hypothetical protein;protein_id=WP_233481999.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1406994 1407473 . - . ID=gene-LU631_RS07275;Name=LU631_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07275;old_locus_tag=LU631_07275 NZ_CP089940.1 Protein Homology CDS 1406994 1407473 . - 0 ID=cds-WP_016192725.1;Parent=gene-LU631_RS07275;Dbxref=Genbank:WP_016192725.1;Name=WP_016192725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169771.1;locus_tag=LU631_RS07275;product=hypothetical protein;protein_id=WP_016192725.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1407457 1407714 . - . ID=gene-LU631_RS07280;Name=LU631_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07280;old_locus_tag=LU631_07280 NZ_CP089940.1 Protein Homology CDS 1407457 1407714 . - 0 ID=cds-WP_232426924.1;Parent=gene-LU631_RS07280;Dbxref=Genbank:WP_232426924.1;Name=WP_232426924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088864.1;locus_tag=LU631_RS07280;product=DUF2644 domain-containing protein;protein_id=WP_232426924.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1407732 1408187 . - . ID=gene-LU631_RS07285;Name=LU631_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07285;old_locus_tag=LU631_07285 NZ_CP089940.1 Protein Homology CDS 1407732 1408187 . - 0 ID=cds-WP_016192727.1;Parent=gene-LU631_RS07285;Dbxref=Genbank:WP_016192727.1;Name=WP_016192727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169773.1;locus_tag=LU631_RS07285;product=lysozyme;protein_id=WP_016192727.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1408272 1408721 . - . ID=gene-LU631_RS07290;Name=LU631_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07290;old_locus_tag=LU631_07290 NZ_CP089940.1 Protein Homology CDS 1408272 1408721 . - 0 ID=cds-WP_016192728.1;Parent=gene-LU631_RS07290;Dbxref=Genbank:WP_016192728.1;Name=WP_016192728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192728.1;locus_tag=LU631_RS07290;product=hypothetical protein;protein_id=WP_016192728.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1408723 1409118 . - . ID=gene-LU631_RS07295;Name=LU631_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07295;old_locus_tag=LU631_07295 NZ_CP089940.1 Protein Homology CDS 1408723 1409118 . - 0 ID=cds-WP_016192729.1;Parent=gene-LU631_RS07295;Dbxref=Genbank:WP_016192729.1;Name=WP_016192729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192729.1;locus_tag=LU631_RS07295;product=regulatory protein GemA;protein_id=WP_016192729.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1409263 1409589 . - . ID=gene-LU631_RS07300;Name=LU631_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07300;old_locus_tag=LU631_07300 NZ_CP089940.1 GeneMarkS-2+ CDS 1409263 1409589 . - 0 ID=cds-WP_046372221.1;Parent=gene-LU631_RS07300;Dbxref=Genbank:WP_046372221.1;Name=WP_046372221.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS07300;product=hypothetical protein;protein_id=WP_046372221.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1409899 1410126 . - . ID=gene-LU631_RS07305;Name=LU631_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07305;old_locus_tag=LU631_07305 NZ_CP089940.1 GeneMarkS-2+ CDS 1409899 1410126 . - 0 ID=cds-WP_016192732.1;Parent=gene-LU631_RS07305;Dbxref=Genbank:WP_016192732.1;Name=WP_016192732.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS07305;product=hypothetical protein;protein_id=WP_016192732.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1410119 1410955 . - . ID=gene-LU631_RS07310;Name=LU631_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07310;old_locus_tag=LU631_07310 NZ_CP089940.1 Protein Homology CDS 1410119 1410955 . - 0 ID=cds-WP_016192733.1;Parent=gene-LU631_RS07310;Dbxref=Genbank:WP_016192733.1;Name=WP_016192733.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027788.2;locus_tag=LU631_RS07310;product=3'-5' exonuclease;protein_id=WP_016192733.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1411296 1411487 . - . ID=gene-LU631_RS07315;Name=LU631_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07315;old_locus_tag=LU631_07315 NZ_CP089940.1 Protein Homology CDS 1411296 1411487 . - 0 ID=cds-WP_016192735.1;Parent=gene-LU631_RS07315;Dbxref=Genbank:WP_016192735.1;Name=WP_016192735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303413.1;locus_tag=LU631_RS07315;product=hypothetical protein;protein_id=WP_016192735.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1411477 1411698 . - . ID=gene-LU631_RS07320;Name=LU631_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07320;old_locus_tag=LU631_07320 NZ_CP089940.1 Protein Homology CDS 1411477 1411698 . - 0 ID=cds-WP_016192736.1;Parent=gene-LU631_RS07320;Dbxref=Genbank:WP_016192736.1;Name=WP_016192736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014565.1;locus_tag=LU631_RS07320;product=ANR family transcriptional regulator;protein_id=WP_016192736.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1411700 1412329 . - . ID=gene-LU631_RS07325;Name=LU631_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07325;old_locus_tag=LU631_07325 NZ_CP089940.1 Protein Homology CDS 1411700 1412329 . - 0 ID=cds-WP_016192737.1;Parent=gene-LU631_RS07325;Dbxref=Genbank:WP_016192737.1;Name=WP_016192737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480090.1;locus_tag=LU631_RS07325;product=DUF3164 family protein;protein_id=WP_016192737.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1412319 1412549 . - . ID=gene-LU631_RS07330;Name=LU631_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07330;old_locus_tag=LU631_07330 NZ_CP089940.1 Protein Homology CDS 1412319 1412549 . - 0 ID=cds-WP_016192738.1;Parent=gene-LU631_RS07330;Dbxref=Genbank:WP_016192738.1;Name=WP_016192738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088902.1;locus_tag=LU631_RS07330;product=hypothetical protein;protein_id=WP_016192738.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1412550 1412729 . - . ID=gene-LU631_RS07335;Name=LU631_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07335;old_locus_tag=LU631_07335 NZ_CP089940.1 GeneMarkS-2+ CDS 1412550 1412729 . - 0 ID=cds-WP_040465842.1;Parent=gene-LU631_RS07335;Dbxref=Genbank:WP_040465842.1;Name=WP_040465842.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS07335;product=hypothetical protein;protein_id=WP_040465842.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1412734 1412958 . - . ID=gene-LU631_RS07340;Name=LU631_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07340;old_locus_tag=LU631_07340 NZ_CP089940.1 Protein Homology CDS 1412734 1412958 . - 0 ID=cds-WP_016192739.1;Parent=gene-LU631_RS07340;Dbxref=Genbank:WP_016192739.1;Name=WP_016192739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361028.1;locus_tag=LU631_RS07340;product=hypothetical protein;protein_id=WP_016192739.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1412972 1413892 . - . ID=gene-LU631_RS07345;Name=LU631_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07345;old_locus_tag=LU631_07345 NZ_CP089940.1 Protein Homology CDS 1412972 1413892 . - 0 ID=cds-WP_016192740.1;Parent=gene-LU631_RS07345;Dbxref=Genbank:WP_016192740.1;Name=WP_016192740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192740.1;locus_tag=LU631_RS07345;product=AAA family ATPase;protein_id=WP_016192740.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1413903 1415975 . - . ID=gene-LU631_RS07350;Name=LU631_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07350;old_locus_tag=LU631_07350 NZ_CP089940.1 Protein Homology CDS 1413903 1415975 . - 0 ID=cds-WP_016192741.1;Parent=gene-LU631_RS07350;Dbxref=Genbank:WP_016192741.1;Name=WP_016192741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904659.1;locus_tag=LU631_RS07350;product=Mu transposase C-terminal domain-containing protein;protein_id=WP_016192741.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1415978 1416226 . - . ID=gene-LU631_RS07355;Name=LU631_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07355;old_locus_tag=LU631_07355 NZ_CP089940.1 Protein Homology CDS 1415978 1416226 . - 0 ID=cds-WP_040465859.1;Parent=gene-LU631_RS07355;Dbxref=Genbank:WP_040465859.1;Name=WP_040465859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312971.1;locus_tag=LU631_RS07355;product=helix-turn-helix domain-containing protein;protein_id=WP_040465859.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1416408 1417007 . + . ID=gene-LU631_RS07360;Name=LU631_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07360;old_locus_tag=LU631_07360 NZ_CP089940.1 Protein Homology CDS 1416408 1417007 . + 0 ID=cds-WP_016192743.1;Parent=gene-LU631_RS07360;Dbxref=Genbank:WP_016192743.1;Name=WP_016192743.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000542273.1;locus_tag=LU631_RS07360;product=helix-turn-helix domain-containing protein;protein_id=WP_016192743.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1417293 1417904 . + . ID=gene-LU631_RS07365;Name=LU631_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07365;old_locus_tag=LU631_07365 NZ_CP089940.1 Protein Homology CDS 1417293 1417904 . + 0 ID=cds-WP_046372367.1;Parent=gene-LU631_RS07365;Dbxref=Genbank:WP_046372367.1;Name=WP_046372367.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835649.1;locus_tag=LU631_RS07365;product=TIGR03746 family integrating conjugative element protein;protein_id=WP_046372367.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1417901 1418791 . + . ID=gene-LU631_RS07370;Name=LU631_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07370;old_locus_tag=LU631_07370 NZ_CP089940.1 Protein Homology CDS 1417901 1418791 . + 0 ID=cds-WP_016192745.1;Parent=gene-LU631_RS07370;Dbxref=Genbank:WP_016192745.1;Name=WP_016192745.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669263.1;locus_tag=LU631_RS07370;product=TIGR03749 family integrating conjugative element protein;protein_id=WP_016192745.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1418788 1420320 . + . ID=gene-LU631_RS07375;Name=LU631_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07375;old_locus_tag=LU631_07375 NZ_CP089940.1 Protein Homology CDS 1418788 1420320 . + 0 ID=cds-WP_152664265.1;Parent=gene-LU631_RS07375;Dbxref=Genbank:WP_152664265.1;Name=WP_152664265.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539520.1;locus_tag=LU631_RS07375;product=TIGR03752 family integrating conjugative element protein;protein_id=WP_152664265.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1420332 1420592 . + . ID=gene-LU631_RS07380;Name=LU631_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07380;old_locus_tag=LU631_07380 NZ_CP089940.1 Protein Homology CDS 1420332 1420592 . + 0 ID=cds-WP_016193251.1-2;Parent=gene-LU631_RS07380;Dbxref=Genbank:WP_016193251.1;Name=WP_016193251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192003.1;locus_tag=LU631_RS07380;product=hypothetical protein;protein_id=WP_016193251.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1420579 1420983 . + . ID=gene-LU631_RS07385;Name=LU631_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07385;old_locus_tag=LU631_07385 NZ_CP089940.1 Protein Homology CDS 1420579 1420983 . + 0 ID=cds-WP_016193250.1-2;Parent=gene-LU631_RS07385;Dbxref=Genbank:WP_016193250.1;Name=WP_016193250.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192002.1;locus_tag=LU631_RS07385;product=TIGR03751 family conjugal transfer lipoprotein;protein_id=WP_016193250.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1420983 1423808 . + . ID=gene-LU631_RS07390;Name=LU631_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07390;old_locus_tag=LU631_07390 NZ_CP089940.1 Protein Homology CDS 1420983 1423808 . + 0 ID=cds-WP_046372223.1;Parent=gene-LU631_RS07390;Dbxref=Genbank:WP_046372223.1;Name=WP_046372223.1;Ontology_term=GO:0008150,GO:0005524,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=ATP binding|0005524||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885406.1;locus_tag=LU631_RS07390;product=conjugative transfer ATPase;protein_id=WP_046372223.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1423805 1424209 . + . ID=gene-LU631_RS07395;Name=LU631_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07395;old_locus_tag=LU631_07395 NZ_CP089940.1 Protein Homology CDS 1423805 1424209 . + 0 ID=cds-WP_016192748.1;Parent=gene-LU631_RS07395;Dbxref=Genbank:WP_016192748.1;Name=WP_016192748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192058.1;locus_tag=LU631_RS07395;product=hypothetical protein;protein_id=WP_016192748.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1424395 1424712 . + . ID=gene-LU631_RS07400;Name=LU631_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07400;old_locus_tag=LU631_07400 NZ_CP089940.1 Protein Homology CDS 1424395 1424712 . + 0 ID=cds-WP_016192749.1;Parent=gene-LU631_RS07400;Dbxref=Genbank:WP_016192749.1;Name=WP_016192749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013512916.1;locus_tag=LU631_RS07400;product=hypothetical protein;protein_id=WP_016192749.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1424706 1425524 . - . ID=gene-LU631_RS07405;Name=LU631_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07405;old_locus_tag=LU631_07405 NZ_CP089940.1 Protein Homology CDS 1424706 1425524 . - 0 ID=cds-WP_016192750.1;Parent=gene-LU631_RS07405;Dbxref=Genbank:WP_016192750.1;Name=WP_016192750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013512915.1;locus_tag=LU631_RS07405;product=DUF4225 domain-containing protein;protein_id=WP_016192750.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1426268 1426903 . + . ID=gene-LU631_RS07410;Name=LU631_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07410;old_locus_tag=LU631_07410 NZ_CP089940.1 GeneMarkS-2+ CDS 1426268 1426903 . + 0 ID=cds-WP_200896942.1;Parent=gene-LU631_RS07410;Dbxref=Genbank:WP_200896942.1;Name=WP_200896942.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS07410;product=type III effector;protein_id=WP_200896942.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1427015 1428238 . + . ID=gene-LU631_RS07415;Name=LU631_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07415;old_locus_tag=LU631_07415 NZ_CP089940.1 GeneMarkS-2+ CDS 1427015 1428238 . + 0 ID=cds-WP_198292549.1;Parent=gene-LU631_RS07415;Dbxref=Genbank:WP_198292549.1;Name=WP_198292549.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS07415;product=hypothetical protein;protein_id=WP_198292549.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1428967 1431348 . + . ID=gene-LU631_RS07420;Name=LU631_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07420;old_locus_tag=LU631_07420 NZ_CP089940.1 Protein Homology CDS 1428967 1431348 . + 0 ID=cds-WP_046372224.1;Parent=gene-LU631_RS07420;Dbxref=Genbank:WP_046372224.1;Name=WP_046372224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372623.1;locus_tag=LU631_RS07420;product=ATP-binding protein;protein_id=WP_046372224.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1431519 1431923 . + . ID=gene-LU631_RS07425;Name=LU631_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07425;old_locus_tag=LU631_07425 NZ_CP089940.1 Protein Homology CDS 1431519 1431923 . + 0 ID=cds-WP_016192760.1;Parent=gene-LU631_RS07425;Dbxref=Genbank:WP_016192760.1;Name=WP_016192760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000783740.1;locus_tag=LU631_RS07425;product=TIGR03757 family integrating conjugative element protein;protein_id=WP_016192760.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1431920 1432891 . + . ID=gene-LU631_RS07430;Name=LU631_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07430;old_locus_tag=LU631_07430 NZ_CP089940.1 Protein Homology CDS 1431920 1432891 . + 0 ID=cds-WP_016192759.1;Parent=gene-LU631_RS07430;Dbxref=Genbank:WP_016192759.1;Name=WP_016192759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372625.1;locus_tag=LU631_RS07430;product=TIGR03756 family integrating conjugative element protein;protein_id=WP_016192759.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1432903 1434321 . + . ID=gene-LU631_RS07435;Name=LU631_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07435;old_locus_tag=LU631_07435 NZ_CP089940.1 Protein Homology CDS 1432903 1434321 . + 0 ID=cds-WP_233482023.1;Parent=gene-LU631_RS07435;Dbxref=Genbank:WP_233482023.1;Name=WP_233482023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192758.1;locus_tag=LU631_RS07435;product=integrating conjugative element protein;protein_id=WP_233482023.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1434323 1434658 . + . ID=gene-LU631_RS07440;Name=LU631_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07440;old_locus_tag=LU631_07440 NZ_CP089940.1 Protein Homology CDS 1434323 1434658 . + 0 ID=cds-WP_016192757.1;Parent=gene-LU631_RS07440;Dbxref=Genbank:WP_016192757.1;Name=WP_016192757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095183.1;locus_tag=LU631_RS07440;product=hypothetical protein;protein_id=WP_016192757.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1434669 1436207 . + . ID=gene-LU631_RS07445;Name=LU631_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07445;old_locus_tag=LU631_07445 NZ_CP089940.1 Protein Homology CDS 1434669 1436207 . + 0 ID=cds-WP_046372225.1;Parent=gene-LU631_RS07445;Dbxref=Genbank:WP_046372225.1;Name=WP_046372225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372628.1;locus_tag=LU631_RS07445;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=WP_046372225.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1436250 1436516 . - . ID=gene-LU631_RS07450;Name=LU631_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07450;old_locus_tag=LU631_07450 NZ_CP089940.1 Protein Homology CDS 1436250 1436516 . - 0 ID=cds-WP_016192763.1;Parent=gene-LU631_RS07450;Dbxref=Genbank:WP_016192763.1;Name=WP_016192763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817066.1;locus_tag=LU631_RS07450;product=hypothetical protein;protein_id=WP_016192763.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1436767 1437987 . + . ID=gene-LU631_RS07455;Name=LU631_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07455;old_locus_tag=LU631_07455 NZ_CP089940.1 Protein Homology CDS 1436767 1437987 . + 0 ID=cds-WP_016192764.1;Parent=gene-LU631_RS07455;Dbxref=Genbank:WP_016192764.1;Name=WP_016192764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122559.1;locus_tag=LU631_RS07455;product=hypothetical protein;protein_id=WP_016192764.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1438998 1439927 . + . ID=gene-LU631_RS07460;Name=LU631_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07460;old_locus_tag=LU631_07460 NZ_CP089940.1 Protein Homology CDS 1438998 1439927 . + 0 ID=cds-WP_040465846.1;Parent=gene-LU631_RS07460;Dbxref=Genbank:WP_040465846.1;Name=WP_040465846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846572.1;locus_tag=LU631_RS07460;product=integrase domain-containing protein;protein_id=WP_040465846.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1440427 1441467 . + . ID=gene-LU631_RS07465;Name=LU631_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07465;old_locus_tag=LU631_07465 NZ_CP089940.1 Protein Homology CDS 1440427 1441467 . + 0 ID=cds-WP_046371813.1-6;Parent=gene-LU631_RS07465;Dbxref=Genbank:WP_046371813.1;Name=WP_046371813.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS07465;product=IS481 family transposase;protein_id=WP_046371813.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1441591 1442187 . - . ID=gene-LU631_RS07470;Name=LU631_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07470;old_locus_tag=LU631_07470 NZ_CP089940.1 Protein Homology CDS 1441591 1442187 . - 0 ID=cds-WP_016191786.1-2;Parent=gene-LU631_RS07470;Dbxref=Genbank:WP_016191786.1;Name=WP_016191786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243405.1;locus_tag=LU631_RS07470;product=tail fiber assembly protein;protein_id=WP_016191786.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1442187 1442879 . - . ID=gene-LU631_RS07475;Name=LU631_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07475;old_locus_tag=LU631_07475 NZ_CP089940.1 Protein Homology CDS 1442187 1442879 . - 0 ID=cds-WP_016191785.1-2;Parent=gene-LU631_RS07475;Dbxref=Genbank:WP_016191785.1;Name=WP_016191785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246703.1;locus_tag=LU631_RS07475;product=phage tail protein;protein_id=WP_016191785.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1442882 1443466 . - . ID=gene-LU631_RS07480;Name=LU631_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07480;old_locus_tag=LU631_07480 NZ_CP089940.1 Protein Homology CDS 1442882 1443466 . - 0 ID=cds-WP_016191784.1-2;Parent=gene-LU631_RS07480;Dbxref=Genbank:WP_016191784.1;Name=WP_016191784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012989058.1;locus_tag=LU631_RS07480;product=DUF2313 domain-containing protein;protein_id=WP_016191784.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1443457 1444536 . - . ID=gene-LU631_RS07485;Name=LU631_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07485;old_locus_tag=LU631_07485 NZ_CP089940.1 Protein Homology CDS 1443457 1444536 . - 0 ID=cds-WP_016191783.1-2;Parent=gene-LU631_RS07485;Dbxref=Genbank:WP_016191783.1;Name=WP_016191783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012989059.1;locus_tag=LU631_RS07485;product=baseplate J/gp47 family protein;protein_id=WP_016191783.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1444537 1444977 . - . ID=gene-LU631_RS07490;Name=LU631_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07490;old_locus_tag=LU631_07490 NZ_CP089940.1 Protein Homology CDS 1444537 1444977 . - 0 ID=cds-WP_016191782.1-2;Parent=gene-LU631_RS07490;Dbxref=Genbank:WP_016191782.1;Name=WP_016191782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185022.1;locus_tag=LU631_RS07490;product=phage GP46 family protein;protein_id=WP_016191782.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1444974 1445522 . - . ID=gene-LU631_RS07495;Name=LU631_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07495;old_locus_tag=LU631_07495 NZ_CP089940.1 Protein Homology CDS 1444974 1445522 . - 0 ID=cds-WP_016191781.1-2;Parent=gene-LU631_RS07495;Dbxref=Genbank:WP_016191781.1;Name=WP_016191781.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185021.1;locus_tag=LU631_RS07495;product=phage baseplate assembly protein V;protein_id=WP_016191781.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1445519 1446616 . - . ID=gene-LU631_RS07500;Name=LU631_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07500;old_locus_tag=LU631_07500 NZ_CP089940.1 Protein Homology CDS 1445519 1446616 . - 0 ID=cds-WP_016191780.1-2;Parent=gene-LU631_RS07500;Dbxref=Genbank:WP_016191780.1;Name=WP_016191780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012989062.1;locus_tag=LU631_RS07500;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_016191780.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1446600 1447916 . - . ID=gene-LU631_RS07505;Name=LU631_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07505;old_locus_tag=LU631_07505 NZ_CP089940.1 Protein Homology CDS 1446600 1447916 . - 0 ID=cds-WP_016191779.1-2;Parent=gene-LU631_RS07505;Dbxref=Genbank:WP_016191779.1;Name=WP_016191779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847257.1;locus_tag=LU631_RS07505;product=DNA circularization N-terminal domain-containing protein;protein_id=WP_016191779.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1447916 1449724 . - . ID=gene-LU631_RS07510;Name=LU631_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07510;old_locus_tag=LU631_07510 NZ_CP089940.1 GeneMarkS-2+ CDS 1447916 1449724 . - 0 ID=cds-WP_016191778.1-2;Parent=gene-LU631_RS07510;Dbxref=Genbank:WP_016191778.1;Name=WP_016191778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS07510;product=hypothetical protein;protein_id=WP_016191778.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1449725 1449856 . - . ID=gene-LU631_RS26055;Name=LU631_RS26055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26055 NZ_CP089940.1 GeneMarkS-2+ CDS 1449725 1449856 . - 0 ID=cds-WP_016191777.1-2;Parent=gene-LU631_RS26055;Dbxref=Genbank:WP_016191777.1;Name=WP_016191777.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS26055;product=hypothetical protein;protein_id=WP_016191777.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1449858 1450211 . - . ID=gene-LU631_RS07515;Name=LU631_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07515;old_locus_tag=LU631_07515 NZ_CP089940.1 Protein Homology CDS 1449858 1450211 . - 0 ID=cds-WP_016191776.1-2;Parent=gene-LU631_RS07515;Dbxref=Genbank:WP_016191776.1;Name=WP_016191776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185017.1;locus_tag=LU631_RS07515;product=phage tail assembly protein;protein_id=WP_016191776.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1450215 1450574 . - . ID=gene-LU631_RS07520;Name=LU631_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07520;old_locus_tag=LU631_07520 NZ_CP089940.1 Protein Homology CDS 1450215 1450574 . - 0 ID=cds-WP_016191775.1-2;Parent=gene-LU631_RS07520;Dbxref=Genbank:WP_016191775.1;Name=WP_016191775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185016.1;locus_tag=LU631_RS07520;product=phage tail tube protein;protein_id=WP_016191775.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1450584 1452050 . - . ID=gene-LU631_RS07525;Name=LU631_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07525;old_locus_tag=LU631_07525 NZ_CP089940.1 Protein Homology CDS 1450584 1452050 . - 0 ID=cds-WP_016191774.1-2;Parent=gene-LU631_RS07525;Dbxref=Genbank:WP_016191774.1;Name=WP_016191774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185015.1;locus_tag=LU631_RS07525;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_016191774.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1452050 1452229 . - . ID=gene-LU631_RS07530;Name=LU631_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07530;old_locus_tag=LU631_07530 NZ_CP089940.1 Protein Homology CDS 1452050 1452229 . - 0 ID=cds-WP_016191773.1-2;Parent=gene-LU631_RS07530;Dbxref=Genbank:WP_016191773.1;Name=WP_016191773.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022401.2;locus_tag=LU631_RS07530;product=DUF2635 domain-containing protein;protein_id=WP_016191773.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1452222 1452788 . - . ID=gene-LU631_RS07535;Name=LU631_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07535;old_locus_tag=LU631_07535 NZ_CP089940.1 Protein Homology CDS 1452222 1452788 . - 0 ID=cds-WP_016191772.1-2;Parent=gene-LU631_RS07535;Dbxref=Genbank:WP_016191772.1;Name=WP_016191772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185013.1;locus_tag=LU631_RS07535;product=DUF1834 family protein;protein_id=WP_016191772.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1452790 1453242 . - . ID=gene-LU631_RS07540;Name=LU631_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07540;old_locus_tag=LU631_07540 NZ_CP089940.1 Protein Homology CDS 1452790 1453242 . - 0 ID=cds-WP_016191771.1-2;Parent=gene-LU631_RS07540;Dbxref=Genbank:WP_016191771.1;Name=WP_016191771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185012.1;locus_tag=LU631_RS07540;product=DUF1320 family protein;protein_id=WP_016191771.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1453239 1453706 . - . ID=gene-LU631_RS07545;Name=LU631_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07545;old_locus_tag=LU631_07545 NZ_CP089940.1 Protein Homology CDS 1453239 1453706 . - 0 ID=cds-WP_016191770.1-2;Parent=gene-LU631_RS07545;Dbxref=Genbank:WP_016191770.1;Name=WP_016191770.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036841.2;locus_tag=LU631_RS07545;product=HI1506-related protein;protein_id=WP_016191770.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1453784 1454707 . - . ID=gene-LU631_RS07550;Name=LU631_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07550;old_locus_tag=LU631_07550 NZ_CP089940.1 Protein Homology CDS 1453784 1454707 . - 0 ID=cds-WP_040465662.1;Parent=gene-LU631_RS07550;Dbxref=Genbank:WP_040465662.1;Name=WP_040465662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185010.1;locus_tag=LU631_RS07550;product=Mu-like prophage major head subunit gpT family protein;protein_id=WP_040465662.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1454707 1455903 . - . ID=gene-LU631_RS07555;Name=LU631_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07555;old_locus_tag=LU631_07555 NZ_CP089940.1 Protein Homology CDS 1454707 1455903 . - 0 ID=cds-WP_016191767.1;Parent=gene-LU631_RS07555;Dbxref=Genbank:WP_016191767.1;Name=WP_016191767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185009.1;locus_tag=LU631_RS07555;product=phage protease;protein_id=WP_016191767.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1456061 1456528 . - . ID=gene-LU631_RS07560;Name=LU631_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07560;old_locus_tag=LU631_07560 NZ_CP089940.1 Protein Homology CDS 1456061 1456528 . - 0 ID=cds-WP_016191766.1;Parent=gene-LU631_RS07560;Dbxref=Genbank:WP_016191766.1;Name=WP_016191766.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185008.1;locus_tag=LU631_RS07560;product=phage virion morphogenesis protein;protein_id=WP_016191766.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1456529 1457694 . - . ID=gene-LU631_RS07565;Name=LU631_RS07565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS07565;old_locus_tag=LU631_07565;pseudo=true NZ_CP089940.1 Protein Homology CDS 1456529 1457694 . - 0 ID=cds-LU631_RS07565;Parent=gene-LU631_RS07565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016148.2;locus_tag=LU631_RS07565;product=phage minor head protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1457834 1459417 . - . ID=gene-LU631_RS07570;Name=LU631_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07570;old_locus_tag=LU631_07570 NZ_CP089940.1 Protein Homology CDS 1457834 1459417 . - 0 ID=cds-WP_016191763.1;Parent=gene-LU631_RS07570;Dbxref=Genbank:WP_016191763.1;Name=WP_016191763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185007.1;locus_tag=LU631_RS07570;product=DUF935 domain-containing protein;protein_id=WP_016191763.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1459408 1460970 . - . ID=gene-LU631_RS07575;Name=LU631_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07575;old_locus_tag=LU631_07575 NZ_CP089940.1 Protein Homology CDS 1459408 1460970 . - 0 ID=cds-WP_016191762.1;Parent=gene-LU631_RS07575;Dbxref=Genbank:WP_016191762.1;Name=WP_016191762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185006.1;locus_tag=LU631_RS07575;product=terminase family protein;protein_id=WP_016191762.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1460970 1461542 . - . ID=gene-LU631_RS07580;Name=LU631_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07580;old_locus_tag=LU631_07580 NZ_CP089940.1 Protein Homology CDS 1460970 1461542 . - 0 ID=cds-WP_016191761.1;Parent=gene-LU631_RS07580;Dbxref=Genbank:WP_016191761.1;Name=WP_016191761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185005.1;locus_tag=LU631_RS07580;product=DUF3486 family protein;protein_id=WP_016191761.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1461544 1461831 . - . ID=gene-LU631_RS07585;Name=LU631_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07585;old_locus_tag=LU631_07585 NZ_CP089940.1 Protein Homology CDS 1461544 1461831 . - 0 ID=cds-WP_016191760.1;Parent=gene-LU631_RS07585;Dbxref=Genbank:WP_016191760.1;Name=WP_016191760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442919.1;locus_tag=LU631_RS07585;product=hypothetical protein;protein_id=WP_016191760.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1461834 1462127 . - . ID=gene-LU631_RS07590;Name=LU631_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07590;old_locus_tag=LU631_07590 NZ_CP089940.1 Protein Homology CDS 1461834 1462127 . - 0 ID=cds-WP_016191759.1;Parent=gene-LU631_RS07590;Dbxref=Genbank:WP_016191759.1;Name=WP_016191759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807466.1;locus_tag=LU631_RS07590;product=DUF2730 family protein;protein_id=WP_016191759.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1462120 1462344 . - . ID=gene-LU631_RS07595;Name=LU631_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07595;old_locus_tag=LU631_07595 NZ_CP089940.1 Protein Homology CDS 1462120 1462344 . - 0 ID=cds-WP_016191758.1;Parent=gene-LU631_RS07595;Dbxref=Genbank:WP_016191758.1;Name=WP_016191758.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF013427.2;locus_tag=LU631_RS07595;product=TraR/DksA C4-type zinc finger protein;protein_id=WP_016191758.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1462344 1462946 . - . ID=gene-LU631_RS07600;Name=LU631_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07600;old_locus_tag=LU631_07600 NZ_CP089940.1 GeneMarkS-2+ CDS 1462344 1462946 . - 0 ID=cds-WP_016191757.1;Parent=gene-LU631_RS07600;Dbxref=Genbank:WP_016191757.1;Name=WP_016191757.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS07600;product=hypothetical protein;protein_id=WP_016191757.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1462939 1463172 . - . ID=gene-LU631_RS07605;Name=LU631_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07605;old_locus_tag=LU631_07605 NZ_CP089940.1 Protein Homology CDS 1462939 1463172 . - 0 ID=cds-WP_016191756.1;Parent=gene-LU631_RS07605;Dbxref=Genbank:WP_016191756.1;Name=WP_016191756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185000.1;locus_tag=LU631_RS07605;product=hypothetical protein;protein_id=WP_016191756.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1463162 1463461 . - . ID=gene-LU631_RS07610;Name=LU631_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07610;old_locus_tag=LU631_07610 NZ_CP089940.1 Protein Homology CDS 1463162 1463461 . - 0 ID=cds-WP_016191755.1;Parent=gene-LU631_RS07610;Dbxref=Genbank:WP_016191755.1;Name=WP_016191755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184999.1;locus_tag=LU631_RS07610;product=hypothetical protein;protein_id=WP_016191755.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1463461 1463967 . - . ID=gene-LU631_RS07615;Name=LU631_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07615;old_locus_tag=LU631_07615 NZ_CP089940.1 Protein Homology CDS 1463461 1463967 . - 0 ID=cds-WP_016191754.1;Parent=gene-LU631_RS07615;Dbxref=Genbank:WP_016191754.1;Name=WP_016191754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184998.1;locus_tag=LU631_RS07615;product=glycoside hydrolase family 108 protein;protein_id=WP_016191754.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1464089 1464529 . - . ID=gene-LU631_RS07620;Name=LU631_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07620;old_locus_tag=LU631_07620 NZ_CP089940.1 Protein Homology CDS 1464089 1464529 . - 0 ID=cds-WP_016191753.1;Parent=gene-LU631_RS07620;Dbxref=Genbank:WP_016191753.1;Name=WP_016191753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184997.1;locus_tag=LU631_RS07620;product=transcriptional regulator;protein_id=WP_016191753.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1464526 1465035 . - . ID=gene-LU631_RS07625;Name=LU631_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07625;old_locus_tag=LU631_07625 NZ_CP089940.1 Protein Homology CDS 1464526 1465035 . - 0 ID=cds-WP_016191752.1;Parent=gene-LU631_RS07625;Dbxref=Genbank:WP_016191752.1;Name=WP_016191752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184995.1;locus_tag=LU631_RS07625;product=hypothetical protein;protein_id=WP_016191752.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1465032 1465586 . - . ID=gene-LU631_RS07630;Name=LU631_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07630;old_locus_tag=LU631_07630 NZ_CP089940.1 Protein Homology CDS 1465032 1465586 . - 0 ID=cds-WP_016191751.1;Parent=gene-LU631_RS07630;Dbxref=Genbank:WP_016191751.1;Name=WP_016191751.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018011.2;locus_tag=LU631_RS07630;product=regulatory protein GemA;protein_id=WP_016191751.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1465697 1465957 . - . ID=gene-LU631_RS07635;Name=LU631_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07635;old_locus_tag=LU631_07635 NZ_CP089940.1 GeneMarkS-2+ CDS 1465697 1465957 . - 0 ID=cds-WP_016191750.1;Parent=gene-LU631_RS07635;Dbxref=Genbank:WP_016191750.1;Name=WP_016191750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS07635;product=hypothetical protein;protein_id=WP_016191750.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1465959 1466573 . - . ID=gene-LU631_RS07640;Name=LU631_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07640;old_locus_tag=LU631_07640 NZ_CP089940.1 Protein Homology CDS 1465959 1466573 . - 0 ID=cds-WP_016191749.1;Parent=gene-LU631_RS07640;Dbxref=Genbank:WP_016191749.1;Name=WP_016191749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807477.1;locus_tag=LU631_RS07640;product=DUF3164 family protein;protein_id=WP_016191749.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1466566 1466808 . - . ID=gene-LU631_RS07645;Name=LU631_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07645;old_locus_tag=LU631_07645 NZ_CP089940.1 GeneMarkS-2+ CDS 1466566 1466808 . - 0 ID=cds-WP_016191748.1;Parent=gene-LU631_RS07645;Dbxref=Genbank:WP_016191748.1;Name=WP_016191748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS07645;product=hypothetical protein;protein_id=WP_016191748.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1466805 1467290 . - . ID=gene-LU631_RS07650;Name=LU631_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07650;old_locus_tag=LU631_07650 NZ_CP089940.1 Protein Homology CDS 1466805 1467290 . - 0 ID=cds-WP_233482000.1;Parent=gene-LU631_RS07650;Dbxref=Genbank:WP_233482000.1;Name=WP_233482000.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020643.2;locus_tag=LU631_RS07650;product=AAA family ATPase;protein_id=WP_233482000.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1467208 1467756 . - . ID=gene-LU631_RS07655;Name=LU631_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07655;old_locus_tag=LU631_07655 NZ_CP089940.1 GeneMarkS-2+ CDS 1467208 1467756 . - 0 ID=cds-WP_016191746.1;Parent=gene-LU631_RS07655;Dbxref=Genbank:WP_016191746.1;Name=WP_016191746.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS07655;product=DNA transposition protein;protein_id=WP_016191746.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1467759 1468499 . - . ID=gene-LU631_RS07660;Name=LU631_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07660;old_locus_tag=LU631_07660 NZ_CP089940.1 Protein Homology CDS 1467759 1468499 . - 0 ID=cds-WP_051124389.1;Parent=gene-LU631_RS07660;Dbxref=Genbank:WP_051124389.1;Name=WP_051124389.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020859.2;locus_tag=LU631_RS07660;product=Mu transposase C-terminal domain-containing protein;protein_id=WP_051124389.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1468742 1469209 . + . ID=gene-LU631_RS07665;Name=LU631_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07665;old_locus_tag=LU631_07665 NZ_CP089940.1 Protein Homology CDS 1468742 1469209 . + 0 ID=cds-WP_016191744.1;Parent=gene-LU631_RS07665;Dbxref=Genbank:WP_016191744.1;Name=WP_016191744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146808.1;locus_tag=LU631_RS07665;product=STY4534 family ICE replication protein;protein_id=WP_016191744.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1469287 1469490 . + . ID=gene-LU631_RS07670;Name=LU631_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07670;old_locus_tag=LU631_07670 NZ_CP089940.1 Protein Homology CDS 1469287 1469490 . + 0 ID=cds-WP_016191743.1;Parent=gene-LU631_RS07670;Dbxref=Genbank:WP_016191743.1;Name=WP_016191743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869776.1;locus_tag=LU631_RS07670;product=hypothetical protein;protein_id=WP_016191743.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1469503 1469988 . + . ID=gene-LU631_RS07675;Name=LU631_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07675;old_locus_tag=LU631_07675 NZ_CP089940.1 Protein Homology CDS 1469503 1469988 . + 0 ID=cds-WP_016191742.1;Parent=gene-LU631_RS07675;Dbxref=Genbank:WP_016191742.1;Name=WP_016191742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249162.1;locus_tag=LU631_RS07675;product=single-stranded DNA-binding protein;protein_id=WP_016191742.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1470067 1470501 . + . ID=gene-LU631_RS07680;Name=LU631_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07680;old_locus_tag=LU631_07680 NZ_CP089940.1 Protein Homology CDS 1470067 1470501 . + 0 ID=cds-WP_016191741.1;Parent=gene-LU631_RS07680;Dbxref=Genbank:WP_016191741.1;Name=WP_016191741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191741.1;locus_tag=LU631_RS07680;product=DUF29 domain-containing protein;protein_id=WP_016191741.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1470640 1471272 . + . ID=gene-LU631_RS07685;Name=LU631_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07685;old_locus_tag=LU631_07685 NZ_CP089940.1 Protein Homology CDS 1470640 1471272 . + 0 ID=cds-WP_016191740.1;Parent=gene-LU631_RS07685;Dbxref=Genbank:WP_016191740.1;Name=WP_016191740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191740.1;locus_tag=LU631_RS07685;product=PilL N-terminal domain-containing protein;protein_id=WP_016191740.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1471409 1471588 . + . ID=gene-LU631_RS07690;Name=LU631_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07690;old_locus_tag=LU631_07690 NZ_CP089940.1 GeneMarkS-2+ CDS 1471409 1471588 . + 0 ID=cds-WP_232426883.1;Parent=gene-LU631_RS07690;Dbxref=Genbank:WP_232426883.1;Name=WP_232426883.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS07690;product=hypothetical protein;protein_id=WP_232426883.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1471655 1472011 . + . ID=gene-LU631_RS07695;Name=LU631_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07695;old_locus_tag=LU631_07695 NZ_CP089940.1 GeneMarkS-2+ CDS 1471655 1472011 . + 0 ID=cds-WP_232426882.1;Parent=gene-LU631_RS07695;Dbxref=Genbank:WP_232426882.1;Name=WP_232426882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS07695;product=hypothetical protein;protein_id=WP_232426882.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1472022 1472732 . + . ID=gene-LU631_RS07700;Name=LU631_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07700;old_locus_tag=LU631_07700 NZ_CP089940.1 Protein Homology CDS 1472022 1472732 . + 0 ID=cds-WP_016191739.1;Parent=gene-LU631_RS07700;Dbxref=Genbank:WP_016191739.1;Name=WP_016191739.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191739.1;locus_tag=LU631_RS07700;product=TIGR03759 family integrating conjugative element protein;protein_id=WP_016191739.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1472711 1473403 . + . ID=gene-LU631_RS07705;Name=LU631_RS07705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS07705;old_locus_tag=LU631_07705;pseudo=true NZ_CP089940.1 Protein Homology CDS 1472711 1473403 . + 0 ID=cds-LU631_RS07705;Parent=gene-LU631_RS07705;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004790.1;locus_tag=LU631_RS07705;product=lytic transglycosylase domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1473406 1473930 . + . ID=gene-LU631_RS07710;Name=LU631_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07710;old_locus_tag=LU631_07710 NZ_CP089940.1 Protein Homology CDS 1473406 1473930 . + 0 ID=cds-WP_016191737.1;Parent=gene-LU631_RS07710;Dbxref=Genbank:WP_016191737.1;Name=WP_016191737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191737.1;locus_tag=LU631_RS07710;product=integrating conjugative element protein;protein_id=WP_016191737.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1473927 1474562 . + . ID=gene-LU631_RS07715;Name=LU631_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07715;old_locus_tag=LU631_07715 NZ_CP089940.1 Protein Homology CDS 1473927 1474562 . + 0 ID=cds-WP_016191736.1;Parent=gene-LU631_RS07715;Dbxref=Genbank:WP_016191736.1;Name=WP_016191736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060267.1;locus_tag=LU631_RS07715;product=restriction endonuclease;protein_id=WP_016191736.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1474559 1475332 . + . ID=gene-LU631_RS07720;Name=LU631_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07720;old_locus_tag=LU631_07720 NZ_CP089940.1 Protein Homology CDS 1474559 1475332 . + 0 ID=cds-WP_016191735.1;Parent=gene-LU631_RS07720;Dbxref=Genbank:WP_016191735.1;Name=WP_016191735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000675383.1;locus_tag=LU631_RS07720;product=hypothetical protein;protein_id=WP_016191735.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1475329 1477443 . + . ID=gene-LU631_RS07725;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=LU631_RS07725;old_locus_tag=LU631_07725 NZ_CP089940.1 Protein Homology CDS 1475329 1477443 . + 0 ID=cds-WP_016191734.1;Parent=gene-LU631_RS07725;Dbxref=Genbank:WP_016191734.1;Name=WP_016191734.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060269.1;locus_tag=LU631_RS07725;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_016191734.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1477424 1478182 . + . ID=gene-LU631_RS07730;Name=LU631_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07730;old_locus_tag=LU631_07730 NZ_CP089940.1 Protein Homology CDS 1477424 1478182 . + 0 ID=cds-WP_016191733.1;Parent=gene-LU631_RS07730;Dbxref=Genbank:WP_016191733.1;Name=WP_016191733.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811169.1;locus_tag=LU631_RS07730;product=TIGR03747 family integrating conjugative element membrane protein;protein_id=WP_016191733.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1478417 1478746 . + . ID=gene-LU631_RS07735;Name=LU631_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07735;old_locus_tag=LU631_07735 NZ_CP089940.1 Protein Homology CDS 1478417 1478746 . + 0 ID=cds-WP_016191732.1;Parent=gene-LU631_RS07735;Dbxref=Genbank:WP_016191732.1;Name=WP_016191732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191732.1;locus_tag=LU631_RS07735;product=RAQPRD family integrative conjugative element protein;protein_id=WP_016191732.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1478746 1478988 . + . ID=gene-LU631_RS07740;Name=LU631_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07740;old_locus_tag=LU631_07740 NZ_CP089940.1 Protein Homology CDS 1478746 1478988 . + 0 ID=cds-WP_016191731.1;Parent=gene-LU631_RS07740;Dbxref=Genbank:WP_016191731.1;Name=WP_016191731.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016260100.1;locus_tag=LU631_RS07740;product=TIGR03758 family integrating conjugative element protein;protein_id=WP_016191731.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1479056 1479421 . + . ID=gene-LU631_RS07745;Name=LU631_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07745;old_locus_tag=LU631_07745 NZ_CP089940.1 Protein Homology CDS 1479056 1479421 . + 0 ID=cds-WP_016191730.1;Parent=gene-LU631_RS07745;Dbxref=Genbank:WP_016191730.1;Name=WP_016191730.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060272.1;locus_tag=LU631_RS07745;product=TIGR03745 family integrating conjugative element membrane protein;protein_id=WP_016191730.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1479434 1479799 . + . ID=gene-LU631_RS07750;Name=LU631_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07750;old_locus_tag=LU631_07750 NZ_CP089940.1 Protein Homology CDS 1479434 1479799 . + 0 ID=cds-WP_016191729.1;Parent=gene-LU631_RS07750;Dbxref=Genbank:WP_016191729.1;Name=WP_016191729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060273.1;locus_tag=LU631_RS07750;product=TIGR03750 family conjugal transfer protein;protein_id=WP_016191729.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1479796 1480467 . + . ID=gene-LU631_RS07755;Name=LU631_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07755;old_locus_tag=LU631_07755 NZ_CP089940.1 Protein Homology CDS 1479796 1480467 . + 0 ID=cds-WP_016191728.1;Parent=gene-LU631_RS07755;Dbxref=Genbank:WP_016191728.1;Name=WP_016191728.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146792.1;locus_tag=LU631_RS07755;product=TIGR03746 family integrating conjugative element protein;protein_id=WP_016191728.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1480464 1481372 . + . ID=gene-LU631_RS07760;Name=LU631_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07760;old_locus_tag=LU631_07760 NZ_CP089940.1 Protein Homology CDS 1480464 1481372 . + 0 ID=cds-WP_016191727.1;Parent=gene-LU631_RS07760;Dbxref=Genbank:WP_016191727.1;Name=WP_016191727.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811174.1;locus_tag=LU631_RS07760;product=TIGR03749 family integrating conjugative element protein;protein_id=WP_016191727.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1481365 1482867 . + . ID=gene-LU631_RS07765;Name=LU631_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07765;old_locus_tag=LU631_07765 NZ_CP089940.1 Protein Homology CDS 1481365 1482867 . + 0 ID=cds-WP_016191726.1;Parent=gene-LU631_RS07765;Dbxref=Genbank:WP_016191726.1;Name=WP_016191726.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811175.1;locus_tag=LU631_RS07765;product=TIGR03752 family integrating conjugative element protein;protein_id=WP_016191726.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1482894 1483297 . + . ID=gene-LU631_RS07770;Name=LU631_RS07770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS07770;old_locus_tag=LU631_07770;pseudo=true NZ_CP089940.1 Protein Homology CDS 1482894 1483297 . + 0 ID=cds-LU631_RS07770;Parent=gene-LU631_RS07770;Note=frameshifted;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811177.1;locus_tag=LU631_RS07770;product=TIGR03751 family conjugal transfer lipoprotein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1483297 1486155 . + . ID=gene-LU631_RS07775;Name=LU631_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07775;old_locus_tag=LU631_07775 NZ_CP089940.1 Protein Homology CDS 1483297 1486155 . + 0 ID=cds-WP_016191725.1;Parent=gene-LU631_RS07775;Dbxref=Genbank:WP_016191725.1;Name=WP_016191725.1;Ontology_term=GO:0008150,GO:0005524,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=ATP binding|0005524||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191725.1;locus_tag=LU631_RS07775;product=conjugative transfer ATPase;protein_id=WP_016191725.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1486152 1486556 . + . ID=gene-LU631_RS07780;Name=LU631_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07780;old_locus_tag=LU631_07780 NZ_CP089940.1 Protein Homology CDS 1486152 1486556 . + 0 ID=cds-WP_016191724.1;Parent=gene-LU631_RS07780;Dbxref=Genbank:WP_016191724.1;Name=WP_016191724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191724.1;locus_tag=LU631_RS07780;product=hypothetical protein;protein_id=WP_016191724.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1486719 1487009 . + . ID=gene-LU631_RS07785;Name=LU631_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07785;old_locus_tag=LU631_07785 NZ_CP089940.1 Protein Homology CDS 1486719 1487009 . + 0 ID=cds-WP_016191723.1;Parent=gene-LU631_RS07785;Dbxref=Genbank:WP_016191723.1;Name=WP_016191723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016260101.1;locus_tag=LU631_RS07785;product=hypothetical protein;protein_id=WP_016191723.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1487095 1487214 . + . ID=gene-LU631_RS07790;Name=LU631_RS07790;end_range=1487214,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS07790;old_locus_tag=LU631_07790;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1487095 1487214 . + 0 ID=cds-LU631_RS07790;Parent=gene-LU631_RS07790;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1487214,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168255.1;locus_tag=LU631_RS07790;partial=true;product=DUF1795 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1487445 1490705 . + . ID=gene-LU631_RS07795;Name=LU631_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07795;old_locus_tag=LU631_07795 NZ_CP089940.1 Protein Homology CDS 1487445 1490705 . + 0 ID=cds-WP_016191722.1;Parent=gene-LU631_RS07795;Dbxref=Genbank:WP_016191722.1;Name=WP_016191722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060279.1;locus_tag=LU631_RS07795;product=hypothetical protein;protein_id=WP_016191722.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1490889 1491293 . + . ID=gene-LU631_RS07800;Name=LU631_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07800;old_locus_tag=LU631_07800 NZ_CP089940.1 Protein Homology CDS 1490889 1491293 . + 0 ID=cds-WP_016191721.1;Parent=gene-LU631_RS07800;Dbxref=Genbank:WP_016191721.1;Name=WP_016191721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191721.1;locus_tag=LU631_RS07800;product=TIGR03757 family integrating conjugative element protein;protein_id=WP_016191721.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1491295 1492302 . + . ID=gene-LU631_RS07805;Name=LU631_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07805;old_locus_tag=LU631_07805 NZ_CP089940.1 Protein Homology CDS 1491295 1492302 . + 0 ID=cds-WP_016191720.1;Parent=gene-LU631_RS07805;Dbxref=Genbank:WP_016191720.1;Name=WP_016191720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060281.1;locus_tag=LU631_RS07805;product=TIGR03756 family integrating conjugative element protein;protein_id=WP_016191720.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1492313 1493788 . + . ID=gene-LU631_RS07810;Name=LU631_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07810;old_locus_tag=LU631_07810 NZ_CP089940.1 Protein Homology CDS 1492313 1493788 . + 0 ID=cds-WP_016191719.1;Parent=gene-LU631_RS07810;Dbxref=Genbank:WP_016191719.1;Name=WP_016191719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146862.1;locus_tag=LU631_RS07810;product=integrating conjugative element protein;protein_id=WP_016191719.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1493805 1494176 . + . ID=gene-LU631_RS07815;Name=LU631_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07815;old_locus_tag=LU631_07815 NZ_CP089940.1 Protein Homology CDS 1493805 1494176 . + 0 ID=cds-WP_016191718.1;Parent=gene-LU631_RS07815;Dbxref=Genbank:WP_016191718.1;Name=WP_016191718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016260102.1;locus_tag=LU631_RS07815;product=hypothetical protein;protein_id=WP_016191718.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1494173 1494859 . + . ID=gene-LU631_RS07820;Name=LU631_RS07820;end_range=1494859,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS07820;old_locus_tag=LU631_07820;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1494173 1494859 . + 0 ID=cds-LU631_RS07820;Parent=gene-LU631_RS07820;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1494859,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811186.1;locus_tag=LU631_RS07820;partial=true;product=conjugal transfer protein TraG N-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1495097 1496542 . + . ID=gene-LU631_RS07825;Name=LU631_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07825;old_locus_tag=LU631_07825 NZ_CP089940.1 Protein Homology CDS 1495097 1496542 . + 0 ID=cds-WP_016191716.1;Parent=gene-LU631_RS07825;Dbxref=Genbank:WP_016191716.1;Name=WP_016191716.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060299.1;locus_tag=LU631_RS07825;product=UvrD-helicase domain-containing protein;protein_id=WP_016191716.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1496536 1498104 . + . ID=gene-LU631_RS07830;Name=LU631_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07830;old_locus_tag=LU631_07830 NZ_CP089940.1 Protein Homology CDS 1496536 1498104 . + 0 ID=cds-WP_016191715.1;Parent=gene-LU631_RS07830;Dbxref=Genbank:WP_016191715.1;Name=WP_016191715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811216.1;locus_tag=LU631_RS07830;product=TraI domain-containing protein;protein_id=WP_016191715.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1498422 1499462 . + . ID=gene-LU631_RS07835;Name=LU631_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07835;old_locus_tag=LU631_07835 NZ_CP089940.1 Protein Homology CDS 1498422 1499462 . + 0 ID=cds-WP_046371813.1-7;Parent=gene-LU631_RS07835;Dbxref=Genbank:WP_046371813.1;Name=WP_046371813.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS07835;product=IS481 family transposase;protein_id=WP_046371813.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1499589 1499978 . - . ID=gene-LU631_RS07840;Name=LU631_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07840;old_locus_tag=LU631_07840 NZ_CP089940.1 Protein Homology CDS 1499589 1499978 . - 0 ID=cds-WP_016191714.1;Parent=gene-LU631_RS07840;Dbxref=Genbank:WP_016191714.1;Name=WP_016191714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001281697.1;locus_tag=LU631_RS07840;product=phage transcriptional regulator;protein_id=WP_016191714.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1499975 1500400 . - . ID=gene-LU631_RS07845;Name=LU631_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07845;old_locus_tag=LU631_07845 NZ_CP089940.1 Protein Homology CDS 1499975 1500400 . - 0 ID=cds-WP_016191713.1;Parent=gene-LU631_RS07845;Dbxref=Genbank:WP_016191713.1;Name=WP_016191713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118590.1;locus_tag=LU631_RS07845;product=regulatory protein GemA;protein_id=WP_016191713.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1500400 1500609 . - . ID=gene-LU631_RS07850;Name=LU631_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07850;old_locus_tag=LU631_07850 NZ_CP089940.1 Protein Homology CDS 1500400 1500609 . - 0 ID=cds-WP_016191712.1;Parent=gene-LU631_RS07850;Dbxref=Genbank:WP_016191712.1;Name=WP_016191712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297463.1;locus_tag=LU631_RS07850;product=hypothetical protein;protein_id=WP_016191712.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1500606 1501253 . - . ID=gene-LU631_RS07855;Name=LU631_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07855;old_locus_tag=LU631_07855 NZ_CP089940.1 Protein Homology CDS 1500606 1501253 . - 0 ID=cds-WP_233482024.1;Parent=gene-LU631_RS07855;Dbxref=Genbank:WP_233482024.1;Name=WP_233482024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000344126.1;locus_tag=LU631_RS07855;product=DUF2786 domain-containing protein;protein_id=WP_233482024.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1501303 1501491 . - . ID=gene-LU631_RS07860;Name=LU631_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07860;old_locus_tag=LU631_07860 NZ_CP089940.1 Protein Homology CDS 1501303 1501491 . - 0 ID=cds-WP_016191710.1;Parent=gene-LU631_RS07860;Dbxref=Genbank:WP_016191710.1;Name=WP_016191710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000264906.1;locus_tag=LU631_RS07860;product=hypothetical protein;protein_id=WP_016191710.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1501494 1501712 . - . ID=gene-LU631_RS07865;Name=LU631_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07865;old_locus_tag=LU631_07865 NZ_CP089940.1 Protein Homology CDS 1501494 1501712 . - 0 ID=cds-WP_016191709.1;Parent=gene-LU631_RS07865;Dbxref=Genbank:WP_016191709.1;Name=WP_016191709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374218.1;locus_tag=LU631_RS07865;product=hypothetical protein;protein_id=WP_016191709.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1501702 1501896 . - . ID=gene-LU631_RS07870;Name=LU631_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07870;old_locus_tag=LU631_07870 NZ_CP089940.1 GeneMarkS-2+ CDS 1501702 1501896 . - 0 ID=cds-WP_016191708.1;Parent=gene-LU631_RS07870;Dbxref=Genbank:WP_016191708.1;Name=WP_016191708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS07870;product=hypothetical protein;protein_id=WP_016191708.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1501973 1502584 . - . ID=gene-LU631_RS07875;Name=LU631_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07875;old_locus_tag=LU631_07875 NZ_CP089940.1 Protein Homology CDS 1501973 1502584 . - 0 ID=cds-WP_016191707.1;Parent=gene-LU631_RS07875;Dbxref=Genbank:WP_016191707.1;Name=WP_016191707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803510.1;locus_tag=LU631_RS07875;product=DUF3164 family protein;protein_id=WP_016191707.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1502884 1504044 . - . ID=gene-LU631_RS07880;Name=LU631_RS07880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS07880;old_locus_tag=LU631_07880;partial=true;pseudo=true;start_range=.,1502884 NZ_CP089940.1 Protein Homology CDS 1502884 1504044 . - 0 ID=cds-LU631_RS07880;Parent=gene-LU631_RS07880;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803496.1;locus_tag=LU631_RS07880;partial=true;product=AAA family ATPase;pseudo=true;start_range=.,1502884;transl_table=11 NZ_CP089940.1 RefSeq gene 1504055 1505824 . - . ID=gene-LU631_RS07885;Name=LU631_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07885;old_locus_tag=LU631_07885 NZ_CP089940.1 Protein Homology CDS 1504055 1505824 . - 0 ID=cds-WP_016191705.1;Parent=gene-LU631_RS07885;Dbxref=Genbank:WP_016191705.1;Name=WP_016191705.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001756569.1;locus_tag=LU631_RS07885;product=DDE-type integrase/transposase/recombinase;protein_id=WP_016191705.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1505828 1506040 . - . ID=gene-LU631_RS07890;Name=LU631_RS07890;end_range=1506040,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS07890;old_locus_tag=LU631_07890;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1505828 1506040 . - 0 ID=cds-LU631_RS07890;Parent=gene-LU631_RS07890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1506040,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533825.1;locus_tag=LU631_RS07890;partial=true;product=DUF3102 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1506069 1507289 . - . ID=gene-LU631_RS07895;Name=LU631_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07895;old_locus_tag=LU631_07895 NZ_CP089940.1 Protein Homology CDS 1506069 1507289 . - 0 ID=cds-WP_046371806.1-5;Parent=gene-LU631_RS07895;Dbxref=Genbank:WP_046371806.1;Name=WP_046371806.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025244073.1;locus_tag=LU631_RS07895;product=ISL3 family transposase;protein_id=WP_046371806.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1507358 1508053 . - . ID=gene-LU631_RS07900;Name=LU631_RS07900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS07900;old_locus_tag=LU631_07900;partial=true;pseudo=true;start_range=.,1507358 NZ_CP089940.1 Protein Homology CDS 1507358 1508053 . - 0 ID=cds-LU631_RS07900;Parent=gene-LU631_RS07900;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533825.1;locus_tag=LU631_RS07900;partial=true;product=DUF3102 domain-containing protein;pseudo=true;start_range=.,1507358;transl_table=11 NZ_CP089940.1 RefSeq gene 1508063 1508368 . - . ID=gene-LU631_RS07905;Name=LU631_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07905;old_locus_tag=LU631_07905 NZ_CP089940.1 Protein Homology CDS 1508063 1508368 . - 0 ID=cds-WP_016191702.1;Parent=gene-LU631_RS07905;Dbxref=Genbank:WP_016191702.1;Name=WP_016191702.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000042842.1;locus_tag=LU631_RS07905;product=helix-turn-helix domain-containing protein;protein_id=WP_016191702.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1508421 1508609 . - . ID=gene-LU631_RS07910;Name=LU631_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07910;old_locus_tag=LU631_07910 NZ_CP089940.1 Protein Homology CDS 1508421 1508609 . - 0 ID=cds-WP_016191701.1;Parent=gene-LU631_RS07910;Dbxref=Genbank:WP_016191701.1;Name=WP_016191701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001510316.1;locus_tag=LU631_RS07910;product=DNA-binding protein;protein_id=WP_016191701.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1508672 1509064 . + . ID=gene-LU631_RS07915;Name=LU631_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07915;old_locus_tag=LU631_07915 NZ_CP089940.1 Protein Homology CDS 1508672 1509064 . + 0 ID=cds-WP_233480314.1;Parent=gene-LU631_RS07915;Dbxref=Genbank:WP_233480314.1;Name=WP_233480314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808595.1;locus_tag=LU631_RS07915;product=helix-turn-helix domain-containing protein;protein_id=WP_233480314.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1509185 1509451 . - . ID=gene-LU631_RS07920;Name=LU631_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07920;old_locus_tag=LU631_07920 NZ_CP089940.1 Protein Homology CDS 1509185 1509451 . - 0 ID=cds-WP_016191699.1;Parent=gene-LU631_RS07920;Dbxref=Genbank:WP_016191699.1;Name=WP_016191699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803518.1;locus_tag=LU631_RS07920;product=hypothetical protein;protein_id=WP_016191699.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1509509 1510279 . - . ID=gene-LU631_RS07925;Name=LU631_RS07925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS07925;old_locus_tag=LU631_07925;pseudo=true NZ_CP089940.1 Protein Homology CDS 1509509 1510279 . - 0 ID=cds-LU631_RS07925;Parent=gene-LU631_RS07925;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000664222.1;locus_tag=LU631_RS07925;product=DNA adenine methylase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1510523 1511089 . + . ID=gene-LU631_RS07930;Name=LU631_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07930;old_locus_tag=LU631_07930 NZ_CP089940.1 Protein Homology CDS 1510523 1511089 . + 0 ID=cds-WP_016191698.1;Parent=gene-LU631_RS07930;Dbxref=Genbank:WP_016191698.1;Name=WP_016191698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803513.1;locus_tag=LU631_RS07930;product=DUF2441 domain-containing protein;protein_id=WP_016191698.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1511010 1511333 . - . ID=gene-LU631_RS07935;Name=LU631_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07935;old_locus_tag=LU631_07935 NZ_CP089940.1 Protein Homology CDS 1511010 1511333 . - 0 ID=cds-WP_071598929.1;Parent=gene-LU631_RS07935;Dbxref=Genbank:WP_071598929.1;Name=WP_071598929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001555974.1;locus_tag=LU631_RS07935;product=hypothetical protein;protein_id=WP_071598929.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1511464 1511814 . + . ID=gene-LU631_RS07940;Name=LU631_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07940;old_locus_tag=LU631_07940 NZ_CP089940.1 Protein Homology CDS 1511464 1511814 . + 0 ID=cds-WP_016191696.1;Parent=gene-LU631_RS07940;Dbxref=Genbank:WP_016191696.1;Name=WP_016191696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365653.1;locus_tag=LU631_RS07940;product=putative holin;protein_id=WP_016191696.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1511817 1512539 . + . ID=gene-LU631_RS07945;Name=LU631_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07945;old_locus_tag=LU631_07945 NZ_CP089940.1 Protein Homology CDS 1511817 1512539 . + 0 ID=cds-WP_016191695.1;Parent=gene-LU631_RS07945;Dbxref=Genbank:WP_016191695.1;Name=WP_016191695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122431.1;locus_tag=LU631_RS07945;product=transglycosylase SLT domain-containing protein;protein_id=WP_016191695.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1512529 1513182 . + . ID=gene-LU631_RS07950;Name=LU631_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07950;old_locus_tag=LU631_07950 NZ_CP089940.1 Protein Homology CDS 1512529 1513182 . + 0 ID=cds-WP_016191694.1;Parent=gene-LU631_RS07950;Dbxref=Genbank:WP_016191694.1;Name=WP_016191694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000264665.1;locus_tag=LU631_RS07950;product=lipoprotein;protein_id=WP_016191694.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1513179 1513511 . + . ID=gene-LU631_RS07955;Name=LU631_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07955;old_locus_tag=LU631_07955 NZ_CP089940.1 Protein Homology CDS 1513179 1513511 . + 0 ID=cds-WP_000175096.1;Parent=gene-LU631_RS07955;Dbxref=Genbank:WP_000175096.1;Name=WP_000175096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175096.1;locus_tag=LU631_RS07955;product=hypothetical protein;protein_id=WP_000175096.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1513504 1513815 . + . ID=gene-LU631_RS07960;Name=LU631_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07960;old_locus_tag=LU631_07960 NZ_CP089940.1 Protein Homology CDS 1513504 1513815 . + 0 ID=cds-WP_016191693.1;Parent=gene-LU631_RS07960;Dbxref=Genbank:WP_016191693.1;Name=WP_016191693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227551.1;locus_tag=LU631_RS07960;product=hypothetical protein;protein_id=WP_016191693.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1513815 1514360 . + . ID=gene-LU631_RS07965;Name=LU631_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07965;old_locus_tag=LU631_07965 NZ_CP089940.1 Protein Homology CDS 1513815 1514360 . + 0 ID=cds-WP_016191692.1;Parent=gene-LU631_RS07965;Dbxref=Genbank:WP_016191692.1;Name=WP_016191692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001696566.1;locus_tag=LU631_RS07965;product=DUF3486 family protein;protein_id=WP_016191692.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1514357 1515880 . + . ID=gene-LU631_RS07970;Name=LU631_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07970;old_locus_tag=LU631_07970 NZ_CP089940.1 Protein Homology CDS 1514357 1515880 . + 0 ID=cds-WP_016191691.1;Parent=gene-LU631_RS07970;Dbxref=Genbank:WP_016191691.1;Name=WP_016191691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080258.1;locus_tag=LU631_RS07970;product=hypothetical protein;protein_id=WP_016191691.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1515880 1517376 . + . ID=gene-LU631_RS07975;Name=LU631_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07975;old_locus_tag=LU631_07975 NZ_CP089940.1 Protein Homology CDS 1515880 1517376 . + 0 ID=cds-WP_016191690.1;Parent=gene-LU631_RS07975;Dbxref=Genbank:WP_016191690.1;Name=WP_016191690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240624.1;locus_tag=LU631_RS07975;product=DUF935 domain-containing protein;protein_id=WP_016191690.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1517357 1518178 . + . ID=gene-LU631_RS07980;Name=LU631_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07980;old_locus_tag=LU631_07980 NZ_CP089940.1 Protein Homology CDS 1517357 1518178 . + 0 ID=cds-WP_016191689.1;Parent=gene-LU631_RS07980;Dbxref=Genbank:WP_016191689.1;Name=WP_016191689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191689.1;locus_tag=LU631_RS07980;product=phage minor head protein;protein_id=WP_016191689.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1518181 1518639 . + . ID=gene-LU631_RS07985;Name=LU631_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07985;old_locus_tag=LU631_07985 NZ_CP089940.1 Protein Homology CDS 1518181 1518639 . + 0 ID=cds-WP_016191688.1;Parent=gene-LU631_RS07985;Dbxref=Genbank:WP_016191688.1;Name=WP_016191688.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000135514.1;locus_tag=LU631_RS07985;product=phage virion morphogenesis protein;protein_id=WP_016191688.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1518844 1519941 . + . ID=gene-LU631_RS07990;Name=LU631_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07990;old_locus_tag=LU631_07990 NZ_CP089940.1 Protein Homology CDS 1518844 1519941 . + 0 ID=cds-WP_016191687.1;Parent=gene-LU631_RS07990;Dbxref=Genbank:WP_016191687.1;Name=WP_016191687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273074.1;locus_tag=LU631_RS07990;product=hypothetical protein;protein_id=WP_016191687.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1519955 1520908 . + . ID=gene-LU631_RS07995;Name=LU631_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS07995;old_locus_tag=LU631_07995 NZ_CP089940.1 Protein Homology CDS 1519955 1520908 . + 0 ID=cds-WP_016191686.1;Parent=gene-LU631_RS07995;Dbxref=Genbank:WP_016191686.1;Name=WP_016191686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803522.1;locus_tag=LU631_RS07995;product=hypothetical protein;protein_id=WP_016191686.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1520919 1521275 . + . ID=gene-LU631_RS08000;Name=LU631_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08000;old_locus_tag=LU631_08000 NZ_CP089940.1 Protein Homology CDS 1520919 1521275 . + 0 ID=cds-WP_016191685.1;Parent=gene-LU631_RS08000;Dbxref=Genbank:WP_016191685.1;Name=WP_016191685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191685.1;locus_tag=LU631_RS08000;product=DUF2190 family protein;protein_id=WP_016191685.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1521277 1521723 . + . ID=gene-LU631_RS08005;Name=LU631_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08005;old_locus_tag=LU631_08005 NZ_CP089940.1 Protein Homology CDS 1521277 1521723 . + 0 ID=cds-WP_016191684.1;Parent=gene-LU631_RS08005;Dbxref=Genbank:WP_016191684.1;Name=WP_016191684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271671.1;locus_tag=LU631_RS08005;product=DUF1320 domain-containing protein;protein_id=WP_016191684.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1521723 1522187 . + . ID=gene-LU631_RS08010;Name=LU631_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08010;old_locus_tag=LU631_08010 NZ_CP089940.1 Protein Homology CDS 1521723 1522187 . + 0 ID=cds-WP_016191683.1;Parent=gene-LU631_RS08010;Dbxref=Genbank:WP_016191683.1;Name=WP_016191683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191683.1;locus_tag=LU631_RS08010;product=Gp37 family protein;protein_id=WP_016191683.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1522187 1522438 . + . ID=gene-LU631_RS08015;Name=LU631_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08015;old_locus_tag=LU631_08015 NZ_CP089940.1 Protein Homology CDS 1522187 1522438 . + 0 ID=cds-WP_198292530.1;Parent=gene-LU631_RS08015;Dbxref=Genbank:WP_198292530.1;Name=WP_198292530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001513985.1;locus_tag=LU631_RS08015;product=hypothetical protein;protein_id=WP_198292530.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1522428 1523855 . + . ID=gene-LU631_RS08020;Name=LU631_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08020;old_locus_tag=LU631_08020 NZ_CP089940.1 Protein Homology CDS 1522428 1523855 . + 0 ID=cds-WP_016191681.1;Parent=gene-LU631_RS08020;Dbxref=Genbank:WP_016191681.1;Name=WP_016191681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001610519.1;locus_tag=LU631_RS08020;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_016191681.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1523855 1524376 . + . ID=gene-LU631_RS08025;Name=LU631_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08025;old_locus_tag=LU631_08025 NZ_CP089940.1 Protein Homology CDS 1523855 1524376 . + 0 ID=cds-WP_016191680.1;Parent=gene-LU631_RS08025;Dbxref=Genbank:WP_016191680.1;Name=WP_016191680.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001062395.1;locus_tag=LU631_RS08025;product=phage major tail tube protein;protein_id=WP_016191680.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1524505 1524840 . + . ID=gene-LU631_RS08030;Name=LU631_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08030;old_locus_tag=LU631_08030 NZ_CP089940.1 Protein Homology CDS 1524505 1524840 . + 0 ID=cds-WP_016191679.1;Parent=gene-LU631_RS08030;Dbxref=Genbank:WP_016191679.1;Name=WP_016191679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084214.1;locus_tag=LU631_RS08030;product=phage tail assembly protein;protein_id=WP_016191679.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1524782 1524922 . + . ID=gene-LU631_RS08035;Name=LU631_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08035;old_locus_tag=LU631_08035 NZ_CP089940.1 Protein Homology CDS 1524782 1524922 . + 0 ID=cds-WP_087949712.1;Parent=gene-LU631_RS08035;Dbxref=Genbank:WP_087949712.1;Name=WP_087949712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122450.1;locus_tag=LU631_RS08035;product=GpE family phage tail protein;protein_id=WP_087949712.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1525015 1527480 . + . ID=gene-LU631_RS08040;Name=LU631_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08040;old_locus_tag=LU631_08040 NZ_CP089940.1 Protein Homology CDS 1525015 1527480 . + 0 ID=cds-WP_016191678.1;Parent=gene-LU631_RS08040;Dbxref=Genbank:WP_016191678.1;Name=WP_016191678.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122451.1;locus_tag=LU631_RS08040;product=phage tail tape measure protein;protein_id=WP_016191678.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1527480 1528364 . + . ID=gene-LU631_RS08045;Name=LU631_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08045;old_locus_tag=LU631_08045 NZ_CP089940.1 Protein Homology CDS 1527480 1528364 . + 0 ID=cds-WP_016191677.1;Parent=gene-LU631_RS08045;Dbxref=Genbank:WP_016191677.1;Name=WP_016191677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458380.1;locus_tag=LU631_RS08045;product=phage tail protein;protein_id=WP_016191677.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1528364 1528576 . + . ID=gene-LU631_RS08050;Name=LU631_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08050;old_locus_tag=LU631_08050 NZ_CP089940.1 Protein Homology CDS 1528364 1528576 . + 0 ID=cds-WP_198292528.1;Parent=gene-LU631_RS08050;Dbxref=Genbank:WP_198292528.1;Name=WP_198292528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000478222.1;locus_tag=LU631_RS08050;product=tail protein X;protein_id=WP_198292528.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1528564 1529733 . + . ID=gene-LU631_RS08055;Name=LU631_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08055;old_locus_tag=LU631_08055 NZ_CP089940.1 Protein Homology CDS 1528564 1529733 . + 0 ID=cds-WP_016191675.1;Parent=gene-LU631_RS08055;Dbxref=Genbank:WP_016191675.1;Name=WP_016191675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000808003.1;locus_tag=LU631_RS08055;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_016191675.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1529733 1530245 . + . ID=gene-LU631_RS08060;Name=LU631_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08060;old_locus_tag=LU631_08060 NZ_CP089940.1 Protein Homology CDS 1529733 1530245 . + 0 ID=cds-WP_016191674.1;Parent=gene-LU631_RS08060;Dbxref=Genbank:WP_016191674.1;Name=WP_016191674.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122455.1;locus_tag=LU631_RS08060;product=phage baseplate assembly protein V;protein_id=WP_016191674.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1530300 1530647 . + . ID=gene-LU631_RS08065;Name=LU631_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08065;old_locus_tag=LU631_08065 NZ_CP089940.1 Protein Homology CDS 1530300 1530647 . + 0 ID=cds-WP_016191673.1;Parent=gene-LU631_RS08065;Dbxref=Genbank:WP_016191673.1;Name=WP_016191673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000859115.1;locus_tag=LU631_RS08065;product=GPW/gp25 family protein;protein_id=WP_016191673.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1530638 1531741 . + . ID=gene-LU631_RS08070;Name=LU631_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08070;old_locus_tag=LU631_08070 NZ_CP089940.1 Protein Homology CDS 1530638 1531741 . + 0 ID=cds-WP_016191672.1;Parent=gene-LU631_RS08070;Dbxref=Genbank:WP_016191672.1;Name=WP_016191672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191672.1;locus_tag=LU631_RS08070;product=baseplate J/gp47 family protein;protein_id=WP_016191672.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1531734 1532312 . + . ID=gene-LU631_RS08075;Name=LU631_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08075;old_locus_tag=LU631_08075 NZ_CP089940.1 Protein Homology CDS 1531734 1532312 . + 0 ID=cds-WP_016191671.1;Parent=gene-LU631_RS08075;Dbxref=Genbank:WP_016191671.1;Name=WP_016191671.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000852583.1;locus_tag=LU631_RS08075;product=phage tail protein I;protein_id=WP_016191671.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1532315 1533265 . + . ID=gene-LU631_RS08080;Name=LU631_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08080;old_locus_tag=LU631_08080 NZ_CP089940.1 Protein Homology CDS 1532315 1533265 . + 0 ID=cds-WP_082103854.1;Parent=gene-LU631_RS08080;Dbxref=Genbank:WP_082103854.1;Name=WP_082103854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297740.1;locus_tag=LU631_RS08080;product=phage tail protein;protein_id=WP_082103854.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1533265 1533861 . + . ID=gene-LU631_RS08085;Name=LU631_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08085;old_locus_tag=LU631_08085 NZ_CP089940.1 Protein Homology CDS 1533265 1533861 . + 0 ID=cds-WP_016191668.1;Parent=gene-LU631_RS08085;Dbxref=Genbank:WP_016191668.1;Name=WP_016191668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243405.1;locus_tag=LU631_RS08085;product=tail fiber assembly protein;protein_id=WP_016191668.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1533836 1534444 . - . ID=gene-LU631_RS08090;Name=LU631_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08090;old_locus_tag=LU631_08090 NZ_CP089940.1 Protein Homology CDS 1533836 1534444 . - 0 ID=cds-WP_016191669.1;Parent=gene-LU631_RS08090;Dbxref=Genbank:WP_016191669.1;Name=WP_016191669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243405.1;locus_tag=LU631_RS08090;product=tail assembly chaperone;protein_id=WP_016191669.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1534444 1534896 . - . ID=gene-LU631_RS08095;Name=LU631_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08095;old_locus_tag=LU631_08095 NZ_CP089940.1 Protein Homology CDS 1534444 1534896 . - 0 ID=cds-WP_046372381.1;Parent=gene-LU631_RS08095;Dbxref=Genbank:WP_046372381.1;Name=WP_046372381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001569398.1;locus_tag=LU631_RS08095;product=tail fiber protein;protein_id=WP_046372381.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1534946 1535527 . + . ID=gene-LU631_RS08100;Name=LU631_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08100;old_locus_tag=LU631_08100 NZ_CP089940.1 Protein Homology CDS 1534946 1535527 . + 0 ID=cds-WP_016191666.1;Parent=gene-LU631_RS08100;Dbxref=Genbank:WP_016191666.1;Name=WP_016191666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000268373.1;locus_tag=LU631_RS08100;product=recombinase family protein;protein_id=WP_016191666.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1535582 1536902 . + . ID=gene-LU631_RS08105;Name=LU631_RS08105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08105;old_locus_tag=LU631_08105;pseudo=true NZ_CP089940.1 Protein Homology CDS 1535582 1536902 . + 0 ID=cds-LU631_RS08105;Parent=gene-LU631_RS08105;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013317037.1;locus_tag=LU631_RS08105;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1537215 1538519 . + . ID=gene-LU631_RS08110;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=LU631_RS08110;old_locus_tag=LU631_08110 NZ_CP089940.1 Protein Homology CDS 1537215 1538519 . + 0 ID=cds-WP_016191665.1;Parent=gene-LU631_RS08110;Dbxref=Genbank:WP_016191665.1;Name=WP_016191665.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004707578.1;locus_tag=LU631_RS08110;product=trigger factor;protein_id=WP_016191665.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1538753 1539370 . + . ID=gene-LU631_RS08115;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=LU631_RS08115;old_locus_tag=LU631_08115 NZ_CP089940.1 Protein Homology CDS 1538753 1539370 . + 0 ID=cds-WP_016191664.1;Parent=gene-LU631_RS08115;Dbxref=Genbank:WP_016191664.1;Name=WP_016191664.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319787.1;locus_tag=LU631_RS08115;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_016191664.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1539489 1540763 . + . ID=gene-LU631_RS08120;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=LU631_RS08120;old_locus_tag=LU631_08120 NZ_CP089940.1 Protein Homology CDS 1539489 1540763 . + 0 ID=cds-WP_016191663.1;Parent=gene-LU631_RS08120;Dbxref=Genbank:WP_016191663.1;Name=WP_016191663.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0051082,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=LU631_RS08120;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_016191663.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1540957 1543311 . + . ID=gene-LU631_RS08125;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=LU631_RS08125;old_locus_tag=LU631_08125 NZ_CP089940.1 Protein Homology CDS 1540957 1543311 . + 0 ID=cds-WP_016191662.1;Parent=gene-LU631_RS08125;Dbxref=Genbank:WP_016191662.1;Name=WP_016191662.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=LU631_RS08125;product=endopeptidase La;protein_id=WP_016191662.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1543531 1543803 . + . ID=gene-LU631_RS08130;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=LU631_RS08130;old_locus_tag=LU631_08130 NZ_CP089940.1 Protein Homology CDS 1543531 1543803 . + 0 ID=cds-WP_016191661.1;Parent=gene-LU631_RS08130;Dbxref=Genbank:WP_016191661.1;Name=WP_016191661.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308521.1;locus_tag=LU631_RS08130;product=DNA-binding protein HU-beta;protein_id=WP_016191661.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1544005 1545876 . + . ID=gene-LU631_RS08135;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=LU631_RS08135;old_locus_tag=LU631_08135 NZ_CP089940.1 Protein Homology CDS 1544005 1545876 . + 0 ID=cds-WP_016191660.1;Parent=gene-LU631_RS08135;Dbxref=Genbank:WP_016191660.1;Name=WP_016191660.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168991.1;locus_tag=LU631_RS08135;product=peptidylprolyl isomerase;protein_id=WP_016191660.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1546016 1546396 . + . ID=gene-LU631_RS08140;Name=LU631_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08140;old_locus_tag=LU631_08140 NZ_CP089940.1 Protein Homology CDS 1546016 1546396 . + 0 ID=cds-WP_016191659.1;Parent=gene-LU631_RS08140;Dbxref=Genbank:WP_016191659.1;Name=WP_016191659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800943.1;locus_tag=LU631_RS08140;product=helix-hairpin-helix domain-containing protein;protein_id=WP_016191659.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1546504 1546899 . + . ID=gene-LU631_RS08145;Name=LU631_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08145;old_locus_tag=LU631_08145 NZ_CP089940.1 Protein Homology CDS 1546504 1546899 . + 0 ID=cds-WP_016191658.1;Parent=gene-LU631_RS08145;Dbxref=Genbank:WP_016191658.1;Name=WP_016191658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356998.1;locus_tag=LU631_RS08145;product=thioesterase family protein;protein_id=WP_016191658.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1546891 1547586 . - . ID=gene-LU631_RS08150;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=LU631_RS08150;old_locus_tag=LU631_08150 NZ_CP089940.1 Protein Homology CDS 1546891 1547586 . - 0 ID=cds-WP_016191657.1;Parent=gene-LU631_RS08150;Dbxref=Genbank:WP_016191657.1;Name=WP_016191657.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003850483.1;locus_tag=LU631_RS08150;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_016191657.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1547656 1548651 . - . ID=gene-LU631_RS08155;Name=LU631_RS08155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08155;old_locus_tag=LU631_08155;pseudo=true NZ_CP089940.1 Protein Homology CDS 1547656 1548651 . - 0 ID=cds-LU631_RS08155;Parent=gene-LU631_RS08155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003831022.1;locus_tag=LU631_RS08155;product=PLP-dependent cysteine synthase family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1548790 1548969 . + . ID=gene-LU631_RS08160;Name=LU631_RS08160;end_range=1548969,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08160;old_locus_tag=LU631_08160;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1548790 1548969 . + 0 ID=cds-LU631_RS08160;Parent=gene-LU631_RS08160;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1548969,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225452.1;locus_tag=LU631_RS08160;partial=true;product=winged helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1549065 1549301 . - . ID=gene-LU631_RS08165;Name=LU631_RS08165;end_range=1549301,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08165;old_locus_tag=LU631_08165;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1549065 1549301 . - 0 ID=cds-LU631_RS08165;Parent=gene-LU631_RS08165;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1549301,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611902.1;locus_tag=LU631_RS08165;partial=true;product=ISNCY family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1549479 1549745 . + . ID=gene-LU631_RS08170;Name=LU631_RS08170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08170;old_locus_tag=LU631_08170;partial=true;pseudo=true;start_range=.,1549479 NZ_CP089940.1 Protein Homology CDS 1549479 1549745 . + 0 ID=cds-LU631_RS08170;Parent=gene-LU631_RS08170;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017371436.1;locus_tag=LU631_RS08170;partial=true;product=Lrp/AsnC family transcriptional regulator;pseudo=true;start_range=.,1549479;transl_table=11 NZ_CP089940.1 RefSeq gene 1549779 1551548 . + . ID=gene-LU631_RS08175;Name=LU631_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08175;old_locus_tag=LU631_08175 NZ_CP089940.1 Protein Homology CDS 1549779 1551548 . + 0 ID=cds-WP_016191651.1;Parent=gene-LU631_RS08175;Dbxref=Genbank:WP_016191651.1;Name=WP_016191651.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010671214.1;locus_tag=LU631_RS08175;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_016191651.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1551541 1553319 . + . ID=gene-LU631_RS08180;Name=LU631_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08180;old_locus_tag=LU631_08180 NZ_CP089940.1 Protein Homology CDS 1551541 1553319 . + 0 ID=cds-WP_016191650.1;Parent=gene-LU631_RS08180;Dbxref=Genbank:WP_016191650.1;Name=WP_016191650.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668867.1;locus_tag=LU631_RS08180;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_016191650.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1553563 1553901 . + . ID=gene-LU631_RS08185;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=LU631_RS08185;old_locus_tag=LU631_08185 NZ_CP089940.1 Protein Homology CDS 1553563 1553901 . + 0 ID=cds-WP_016191649.1;Parent=gene-LU631_RS08185;Dbxref=Genbank:WP_016191649.1;Name=WP_016191649.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367937.1;locus_tag=LU631_RS08185;product=P-II family nitrogen regulator;protein_id=WP_016191649.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1553917 1555221 . + . ID=gene-LU631_RS08190;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=LU631_RS08190;old_locus_tag=LU631_08190 NZ_CP089940.1 Protein Homology CDS 1553917 1555221 . + 0 ID=cds-WP_087949710.1;Parent=gene-LU631_RS08190;Dbxref=Genbank:WP_087949710.1;Name=WP_087949710.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium transmembrane transporter activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543632.1;locus_tag=LU631_RS08190;product=ammonium transporter AmtB;protein_id=WP_087949710.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1555283 1556122 . - . ID=gene-LU631_RS08195;Name=LU631_RS08195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08195;old_locus_tag=LU631_08195;pseudo=true NZ_CP089940.1 Protein Homology CDS 1555283 1556122 . - 0 ID=cds-LU631_RS08195;Parent=gene-LU631_RS08195;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804789.1;locus_tag=LU631_RS08195;product=thioesterase family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1556375 1556934 . + . ID=gene-LU631_RS08200;Name=LU631_RS08200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08200;old_locus_tag=LU631_08200;pseudo=true NZ_CP089940.1 Protein Homology CDS 1556375 1556934 . + 0 ID=cds-LU631_RS08200;Parent=gene-LU631_RS08200;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117943.1;locus_tag=LU631_RS08200;product=YbaY family lipoprotein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1556894 1557241 . - . ID=gene-LU631_RS08205;Name=LU631_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08205;old_locus_tag=LU631_08205 NZ_CP089940.1 Protein Homology CDS 1556894 1557241 . - 0 ID=cds-WP_016191645.1;Parent=gene-LU631_RS08205;Dbxref=Genbank:WP_016191645.1;Name=WP_016191645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003850460.1;locus_tag=LU631_RS08205;product=MGMT family protein;protein_id=WP_016191645.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1557460 1557556 . + . ID=gene-LU631_RS08210;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=LU631_RS08210;old_locus_tag=LU631_08210 NZ_CP089940.1 cmsearch SRP_RNA 1557460 1557556 . + . ID=rna-LU631_RS08210;Parent=gene-LU631_RS08210;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS08210;product=signal recognition particle sRNA small type NZ_CP089940.1 cmsearch exon 1557460 1557556 . + . ID=exon-LU631_RS08210-1;Parent=rna-LU631_RS08210;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS08210;product=signal recognition particle sRNA small type NZ_CP089940.1 RefSeq gene 1557596 1557814 . - . ID=gene-LU631_RS08215;Name=LU631_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08215;old_locus_tag=LU631_08215 NZ_CP089940.1 Protein Homology CDS 1557596 1557814 . - 0 ID=cds-WP_016191644.1;Parent=gene-LU631_RS08215;Dbxref=Genbank:WP_016191644.1;Name=WP_016191644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=LU631_RS08215;product=HHA domain-containing protein;protein_id=WP_016191644.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1557839 1558219 . - . ID=gene-LU631_RS08220;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=LU631_RS08220;old_locus_tag=LU631_08220 NZ_CP089940.1 Protein Homology CDS 1557839 1558219 . - 0 ID=cds-WP_016191643.1;Parent=gene-LU631_RS08220;Dbxref=Genbank:WP_016191643.1;Name=WP_016191643.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013508152.1;locus_tag=LU631_RS08220;product=Hha toxicity modulator TomB;protein_id=WP_016191643.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1559114 1559800 . + . ID=gene-LU631_RS08225;Name=LU631_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08225;old_locus_tag=LU631_08225 NZ_CP089940.1 Protein Homology CDS 1559114 1559800 . + 0 ID=cds-WP_046372383.1;Parent=gene-LU631_RS08225;Dbxref=Genbank:WP_046372383.1;Name=WP_046372383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201060.1;locus_tag=LU631_RS08225;product=ABC transporter ATP-binding protein;protein_id=WP_046372383.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1559803 1560669 . + . ID=gene-LU631_RS08230;Name=LU631_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08230;old_locus_tag=LU631_08230 NZ_CP089940.1 Protein Homology CDS 1559803 1560669 . + 0 ID=cds-WP_040465679.1;Parent=gene-LU631_RS08230;Dbxref=Genbank:WP_040465679.1;Name=WP_040465679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201061.1;locus_tag=LU631_RS08230;product=metal ABC transporter permease;protein_id=WP_040465679.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1560666 1561544 . + . ID=gene-LU631_RS08235;Name=LU631_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08235;old_locus_tag=LU631_08235 NZ_CP089940.1 Protein Homology CDS 1560666 1561544 . + 0 ID=cds-WP_016191640.1;Parent=gene-LU631_RS08235;Dbxref=Genbank:WP_016191640.1;Name=WP_016191640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891854.1;locus_tag=LU631_RS08235;product=metal ABC transporter substrate-binding protein;protein_id=WP_016191640.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1561787 1562826 . - . ID=gene-LU631_RS08240;Name=LU631_RS08240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08240;old_locus_tag=LU631_08240;pseudo=true NZ_CP089940.1 Protein Homology CDS 1561787 1562826 . - 0 ID=cds-LU631_RS08240;Parent=gene-LU631_RS08240;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS08240;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1563139 1563276 . - . ID=gene-LU631_RS08245;Name=LU631_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08245;old_locus_tag=LU631_08245 NZ_CP089940.1 GeneMarkS-2+ CDS 1563139 1563276 . - 0 ID=cds-WP_157275241.1;Parent=gene-LU631_RS08245;Dbxref=Genbank:WP_157275241.1;Name=WP_157275241.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS08245;product=hypothetical protein;protein_id=WP_157275241.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1563535 1563954 . - . ID=gene-LU631_RS08250;Name=LU631_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08250;old_locus_tag=LU631_08250 NZ_CP089940.1 GeneMarkS-2+ CDS 1563535 1563954 . - 0 ID=cds-WP_046372402.1;Parent=gene-LU631_RS08250;Dbxref=Genbank:WP_046372402.1;Name=WP_046372402.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS08250;product=hypothetical protein;protein_id=WP_046372402.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1563905 1564636 . - . ID=gene-LU631_RS08255;Name=LU631_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08255;old_locus_tag=LU631_08255 NZ_CP089940.1 GeneMarkS-2+ CDS 1563905 1564636 . - 0 ID=cds-WP_016191638.1;Parent=gene-LU631_RS08255;Dbxref=Genbank:WP_016191638.1;Name=WP_016191638.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS08255;product=hypothetical protein;protein_id=WP_016191638.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1564797 1565836 . - . ID=gene-LU631_RS08260;Name=LU631_RS08260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08260;old_locus_tag=LU631_08260;pseudo=true NZ_CP089940.1 Protein Homology CDS 1564797 1565836 . - 0 ID=cds-LU631_RS08260;Parent=gene-LU631_RS08260;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS08260;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1565960 1566103 . - . ID=gene-LU631_RS08265;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=LU631_RS08265;old_locus_tag=LU631_08265 NZ_CP089940.1 Protein Homology CDS 1565960 1566103 . - 0 ID=cds-WP_016191637.1;Parent=gene-LU631_RS08265;Dbxref=Genbank:WP_016191637.1;Name=WP_016191637.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668859.1;locus_tag=LU631_RS08265;product=type B 50S ribosomal protein L36;protein_id=WP_016191637.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1566116 1566373 . - . ID=gene-LU631_RS08270;Name=LU631_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08270;old_locus_tag=LU631_08270 NZ_CP089940.1 Protein Homology CDS 1566116 1566373 . - 0 ID=cds-WP_016191636.1;Parent=gene-LU631_RS08270;Dbxref=Genbank:WP_016191636.1;Name=WP_016191636.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005564.1;locus_tag=LU631_RS08270;product=type B 50S ribosomal protein L31;protein_id=WP_016191636.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1566575 1569688 . - . ID=gene-LU631_RS08275;Name=LU631_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08275;old_locus_tag=LU631_08275 NZ_CP089940.1 Protein Homology CDS 1566575 1569688 . - 0 ID=cds-WP_016191635.1;Parent=gene-LU631_RS08275;Dbxref=Genbank:WP_016191635.1;Name=WP_016191635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008103890.1;locus_tag=LU631_RS08275;product=multidrug efflux RND transporter permease subunit AcrB;protein_id=WP_016191635.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1569705 1570889 . - . ID=gene-LU631_RS08280;Name=LU631_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08280;old_locus_tag=LU631_08280 NZ_CP089940.1 Protein Homology CDS 1569705 1570889 . - 0 ID=cds-WP_040465659.1;Parent=gene-LU631_RS08280;Dbxref=Genbank:WP_040465659.1;Name=WP_040465659.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201065.1;locus_tag=LU631_RS08280;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_040465659.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1571029 1571670 . + . ID=gene-LU631_RS08285;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=LU631_RS08285;old_locus_tag=LU631_08285 NZ_CP089940.1 Protein Homology CDS 1571029 1571670 . + 0 ID=cds-WP_016191633.1;Parent=gene-LU631_RS08285;Dbxref=Genbank:WP_016191633.1;Name=WP_016191633.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201066.1;locus_tag=LU631_RS08285;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_016191633.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1571667 1571822 . - . ID=gene-LU631_RS08290;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=LU631_RS08290;old_locus_tag=LU631_08290 NZ_CP089940.1 Protein Homology CDS 1571667 1571822 . - 0 ID=cds-WP_016191632.1;Parent=gene-LU631_RS08290;Dbxref=Genbank:WP_016191632.1;Name=WP_016191632.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240373.1;locus_tag=LU631_RS08290;product=pleiotropic regulatory protein RsmS;protein_id=WP_016191632.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1571983 1572315 . - . ID=gene-LU631_RS08295;Name=LU631_RS08295;end_range=1572315,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08295;old_locus_tag=LU631_08295;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1571983 1572315 . - 0 ID=cds-LU631_RS08295;Parent=gene-LU631_RS08295;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1572315,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012197853.1;locus_tag=LU631_RS08295;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1572458 1572793 . - . ID=gene-LU631_RS08300;Name=LU631_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08300;old_locus_tag=LU631_08300 NZ_CP089940.1 GeneMarkS-2+ CDS 1572458 1572793 . - 0 ID=cds-WP_072052878.1;Parent=gene-LU631_RS08300;Dbxref=Genbank:WP_072052878.1;Name=WP_072052878.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS08300;product=transposase;protein_id=WP_072052878.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1572794 1573682 . - . ID=gene-LU631_RS08305;Name=LU631_RS08305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08305;old_locus_tag=LU631_08305;pseudo=true NZ_CP089940.1 Protein Homology CDS 1572794 1573682 . - 0 ID=cds-LU631_RS08305;Parent=gene-LU631_RS08305;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS08305;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1573766 1574602 . - . ID=gene-LU631_RS08310;Name=LU631_RS08310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08310;old_locus_tag=LU631_08310;partial=true;pseudo=true;start_range=.,1573766 NZ_CP089940.1 Protein Homology CDS 1573766 1574602 . - 0 ID=cds-LU631_RS08310;Parent=gene-LU631_RS08310;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005054087.1;locus_tag=LU631_RS08310;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,1573766;transl_table=11 NZ_CP089940.1 RefSeq gene 1574840 1575370 . - . ID=gene-LU631_RS08315;Name=LU631_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08315;old_locus_tag=LU631_08315 NZ_CP089940.1 Protein Homology CDS 1574840 1575370 . - 0 ID=cds-WP_016191627.1;Parent=gene-LU631_RS08315;Dbxref=Genbank:WP_016191627.1;Name=WP_016191627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668852.1;locus_tag=LU631_RS08315;product=primosomal replication protein;protein_id=WP_016191627.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1575575 1576126 . + . ID=gene-LU631_RS08320;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=LU631_RS08320;old_locus_tag=LU631_08320 NZ_CP089940.1 Protein Homology CDS 1575575 1576126 . + 0 ID=cds-WP_016191626.1;Parent=gene-LU631_RS08320;Dbxref=Genbank:WP_016191626.1;Name=WP_016191626.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=LU631_RS08320;product=adenine phosphoribosyltransferase;protein_id=WP_016191626.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1576298 1579852 . - . ID=gene-LU631_RS26060;Name=LU631_RS26060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26060 NZ_CP089940.1 GeneMarkS-2+ CDS 1576298 1579852 . - 0 ID=cds-WP_016191625.1;Parent=gene-LU631_RS26060;Dbxref=Genbank:WP_016191625.1;Name=WP_016191625.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS26060;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_016191625.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1580324 1582264 . + . ID=gene-LU631_RS08350;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=LU631_RS08350;old_locus_tag=LU631_08350 NZ_CP089940.1 Protein Homology CDS 1580324 1582264 . + 0 ID=cds-WP_016191624.1;Parent=gene-LU631_RS08350;Dbxref=Genbank:WP_016191624.1;Name=WP_016191624.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668849.1;locus_tag=LU631_RS08350;product=DNA polymerase III subunit gamma/tau;protein_id=WP_016191624.1;transl_table=11 NZ_CP089940.1 cmsearch sequence_feature 1581606 1581667 . + . ID=id-LU631_RS08350;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS08350 NZ_CP089940.1 RefSeq gene 1582308 1582637 . + . ID=gene-LU631_RS08355;Name=LU631_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08355;old_locus_tag=LU631_08355 NZ_CP089940.1 Protein Homology CDS 1582308 1582637 . + 0 ID=cds-WP_016191623.1;Parent=gene-LU631_RS08355;Dbxref=Genbank:WP_016191623.1;Name=WP_016191623.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=LU631_RS08355;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_016191623.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1582637 1583242 . + . ID=gene-LU631_RS08360;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=LU631_RS08360;old_locus_tag=LU631_08360 NZ_CP089940.1 Protein Homology CDS 1582637 1583242 . + 0 ID=cds-WP_016191622.1;Parent=gene-LU631_RS08360;Dbxref=Genbank:WP_016191622.1;Name=WP_016191622.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005576.1;locus_tag=LU631_RS08360;product=recombination mediator RecR;protein_id=WP_016191622.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1583343 1585220 . + . ID=gene-LU631_RS08365;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=LU631_RS08365;old_locus_tag=LU631_08365 NZ_CP089940.1 Protein Homology CDS 1583343 1585220 . + 0 ID=cds-WP_040465657.1;Parent=gene-LU631_RS08365;Dbxref=Genbank:WP_040465657.1;Name=WP_040465657.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161888.1;locus_tag=LU631_RS08365;product=molecular chaperone HtpG;protein_id=WP_040465657.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1585543 1586187 . + . ID=gene-LU631_RS08370;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=LU631_RS08370;old_locus_tag=LU631_08370 NZ_CP089940.1 Protein Homology CDS 1585543 1586187 . + 0 ID=cds-WP_016191620.1;Parent=gene-LU631_RS08370;Dbxref=Genbank:WP_016191620.1;Name=WP_016191620.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=LU631_RS08370;product=adenylate kinase;protein_id=WP_016191620.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1586292 1587313 . + . ID=gene-LU631_RS08375;Name=LU631_RS08375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08375;old_locus_tag=LU631_08375;pseudo=true NZ_CP089940.1 Protein Homology CDS 1586292 1587313 . + 0 ID=cds-LU631_RS08375;Parent=gene-LU631_RS08375;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS08375;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1587493 1588452 . + . ID=gene-LU631_RS08380;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=LU631_RS08380;old_locus_tag=LU631_08380 NZ_CP089940.1 Protein Homology CDS 1587493 1588452 . + 0 ID=cds-WP_016191617.1;Parent=gene-LU631_RS08380;Dbxref=Genbank:WP_016191617.1;Name=WP_016191617.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003850410.1;locus_tag=LU631_RS08380;product=ferrochelatase;protein_id=WP_016191617.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1588534 1589842 . + . ID=gene-LU631_RS08385;Name=LU631_RS08385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08385;old_locus_tag=LU631_08385;pseudo=true NZ_CP089940.1 Protein Homology CDS 1588534 1589842 . + 0 ID=cds-LU631_RS08385;Parent=gene-LU631_RS08385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225504.1;locus_tag=LU631_RS08385;product=inosine/guanosine kinase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1589859 1591541 . - . ID=gene-LU631_RS08390;Name=LU631_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08390;old_locus_tag=LU631_08390 NZ_CP089940.1 Protein Homology CDS 1589859 1591541 . - 0 ID=cds-WP_016191615.1;Parent=gene-LU631_RS08390;Dbxref=Genbank:WP_016191615.1;Name=WP_016191615.1;Ontology_term=GO:0006813,GO:0008324,GO:0015299,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cation transmembrane transporter activity|0008324||IEA,solute:proton antiporter activity|0015299||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201084.1;locus_tag=LU631_RS08390;product=Kef family K(+) transporter;protein_id=WP_016191615.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1591762 1592961 . - . ID=gene-LU631_RS08395;Name=LU631_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08395;old_locus_tag=LU631_08395 NZ_CP089940.1 Protein Homology CDS 1591762 1592961 . - 0 ID=cds-WP_016191614.1;Parent=gene-LU631_RS08395;Dbxref=Genbank:WP_016191614.1;Name=WP_016191614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799382.1;locus_tag=LU631_RS08395;product=MFS transporter;protein_id=WP_016191614.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1593036 1594688 . + . ID=gene-LU631_RS08400;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=LU631_RS08400;old_locus_tag=LU631_08400 NZ_CP089940.1 Protein Homology CDS 1593036 1594688 . + 0 ID=cds-WP_016191613.1;Parent=gene-LU631_RS08400;Dbxref=Genbank:WP_016191613.1;Name=WP_016191613.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012883792.1;locus_tag=LU631_RS08400;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_016191613.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1595053 1595298 . + . ID=gene-LU631_RS08405;Name=LU631_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08405;old_locus_tag=LU631_08405 NZ_CP089940.1 Protein Homology CDS 1595053 1595298 . + 0 ID=cds-WP_046372384.1;Parent=gene-LU631_RS08405;Dbxref=Genbank:WP_046372384.1;Name=WP_046372384.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: protein motif:HMM:NF018262.2;locus_tag=LU631_RS08405;product=antiterminator Q family protein;protein_id=WP_046372384.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1595343 1596041 . + . ID=gene-LU631_RS08410;Name=LU631_RS08410;end_range=1596041,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08410;old_locus_tag=LU631_08410;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1595343 1596041 . + 0 ID=cds-LU631_RS08410;Parent=gene-LU631_RS08410;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1596041,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611429.1;locus_tag=LU631_RS08410;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1596032 1596514 . + . ID=gene-LU631_RS08415;Name=LU631_RS08415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08415;old_locus_tag=LU631_08415;partial=true;pseudo=true;start_range=.,1596032 NZ_CP089940.1 Protein Homology CDS 1596032 1596514 . + 0 ID=cds-LU631_RS08415;Parent=gene-LU631_RS08415;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343018.1;locus_tag=LU631_RS08415;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,1596032;transl_table=11 NZ_CP089940.1 RefSeq gene 1596565 1597131 . - . ID=gene-LU631_RS08420;Name=LU631_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08420;old_locus_tag=LU631_08420 NZ_CP089940.1 GeneMarkS-2+ CDS 1596565 1597131 . - 0 ID=cds-WP_016191609.1;Parent=gene-LU631_RS08420;Dbxref=Genbank:WP_016191609.1;Name=WP_016191609.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS08420;product=hypothetical protein;protein_id=WP_016191609.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1597133 1597576 . - . ID=gene-LU631_RS08425;Name=LU631_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08425;old_locus_tag=LU631_08425 NZ_CP089940.1 Protein Homology CDS 1597133 1597576 . - 0 ID=cds-WP_016191608.1;Parent=gene-LU631_RS08425;Dbxref=Genbank:WP_016191608.1;Name=WP_016191608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215417.1;locus_tag=LU631_RS08425;product=hypothetical protein;protein_id=WP_016191608.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1597832 1598005 . + . ID=gene-LU631_RS08430;Name=LU631_RS08430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08430;old_locus_tag=LU631_08430;partial=true;pseudo=true;start_range=.,1597832 NZ_CP089940.1 Protein Homology CDS 1597832 1598005 . + 0 ID=cds-LU631_RS08430;Parent=gene-LU631_RS08430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343765.1;locus_tag=LU631_RS08430;partial=true;product=transposase;pseudo=true;start_range=.,1597832;transl_table=11 NZ_CP089940.1 RefSeq gene 1598021 1598326 . - . ID=gene-LU631_RS08435;Name=LU631_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08435;old_locus_tag=LU631_08435 NZ_CP089940.1 GeneMarkS-2+ CDS 1598021 1598326 . - 0 ID=cds-WP_152664306.1;Parent=gene-LU631_RS08435;Dbxref=Genbank:WP_152664306.1;Name=WP_152664306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS08435;product=hypothetical protein;protein_id=WP_152664306.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1598605 1599197 . - . ID=gene-LU631_RS08440;Name=LU631_RS08440;end_range=1599197,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08440;old_locus_tag=LU631_08440;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1598605 1599197 . - 0 ID=cds-LU631_RS08440;Parent=gene-LU631_RS08440;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=1599197,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU631_RS08440;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1599119 1600000 . - . ID=gene-LU631_RS08445;Name=LU631_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08445;old_locus_tag=LU631_08445 NZ_CP089940.1 Protein Homology CDS 1599119 1600000 . - 0 ID=cds-WP_016191606.1;Parent=gene-LU631_RS08445;Dbxref=Genbank:WP_016191606.1;Name=WP_016191606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193072.1;locus_tag=LU631_RS08445;product=hypothetical protein;protein_id=WP_016191606.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1600159 1600557 . + . ID=gene-LU631_RS08450;Name=LU631_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08450;old_locus_tag=LU631_08450 NZ_CP089940.1 GeneMarkS-2+ CDS 1600159 1600557 . + 0 ID=cds-WP_016191605.1;Parent=gene-LU631_RS08450;Dbxref=Genbank:WP_016191605.1;Name=WP_016191605.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS08450;product=hypothetical protein;protein_id=WP_016191605.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1601554 1603152 . + . ID=gene-LU631_RS08455;Name=LU631_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08455;old_locus_tag=LU631_08455 NZ_CP089940.1 Protein Homology CDS 1601554 1603152 . + 0 ID=cds-WP_016191604.1;Parent=gene-LU631_RS08455;Dbxref=Genbank:WP_016191604.1;Name=WP_016191604.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015054.2;locus_tag=LU631_RS08455;product=lytic polysaccharide monooxygenase;protein_id=WP_016191604.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1603453 1604739 . - . ID=gene-LU631_RS08460;Name=LU631_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08460;old_locus_tag=LU631_08460 NZ_CP089940.1 Protein Homology CDS 1603453 1604739 . - 0 ID=cds-WP_016191603.1;Parent=gene-LU631_RS08460;Dbxref=Genbank:WP_016191603.1;Name=WP_016191603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017489846.1;locus_tag=LU631_RS08460;product=O-antigen ligase family protein;protein_id=WP_016191603.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1605004 1605843 . - . ID=gene-LU631_RS08465;Name=LU631_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08465;old_locus_tag=LU631_08465 NZ_CP089940.1 Protein Homology CDS 1605004 1605843 . - 0 ID=cds-WP_016191602.1;Parent=gene-LU631_RS08465;Dbxref=Genbank:WP_016191602.1;Name=WP_016191602.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848617.1;locus_tag=LU631_RS08465;product=MurR/RpiR family transcriptional regulator;protein_id=WP_016191602.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1606036 1606929 . + . ID=gene-LU631_RS08470;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=LU631_RS08470;old_locus_tag=LU631_08470 NZ_CP089940.1 Protein Homology CDS 1606036 1606929 . + 0 ID=cds-WP_016191600.1;Parent=gene-LU631_RS08470;Dbxref=Genbank:WP_016191600.1;Name=WP_016191600.1;Ontology_term=GO:0006040,GO:0009254,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906683.1;locus_tag=LU631_RS08470;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_016191600.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1607138 1607806 . + . ID=gene-LU631_RS08475;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=LU631_RS08475;old_locus_tag=LU631_08475 NZ_CP089940.1 Protein Homology CDS 1607138 1607806 . + 0 ID=cds-WP_087949706.1;Parent=gene-LU631_RS08475;Dbxref=Genbank:WP_087949706.1;Name=WP_087949706.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667363.1;locus_tag=LU631_RS08475;product=phosphatidylglycerophosphatase C;protein_id=WP_087949706.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1607851 1608357 . + . ID=gene-LU631_RS08480;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=LU631_RS08480;old_locus_tag=LU631_08480 NZ_CP089940.1 Protein Homology CDS 1607851 1608357 . + 0 ID=cds-WP_016191598.1;Parent=gene-LU631_RS08480;Dbxref=Genbank:WP_016191598.1;Name=WP_016191598.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009088680.1;locus_tag=LU631_RS08480;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_016191598.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1608368 1609828 . - . ID=gene-LU631_RS08485;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=LU631_RS08485;old_locus_tag=LU631_08485 NZ_CP089940.1 Protein Homology CDS 1608368 1609828 . - 0 ID=cds-WP_016191597.1;Parent=gene-LU631_RS08485;Dbxref=Genbank:WP_016191597.1;Name=WP_016191597.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848623.1;locus_tag=LU631_RS08485;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_016191597.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1610099 1613986 . + . ID=gene-LU631_RS08490;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=LU631_RS08490;old_locus_tag=LU631_08490 NZ_CP089940.1 Protein Homology CDS 1610099 1613986 . + 0 ID=cds-WP_040465655.1;Parent=gene-LU631_RS08490;Dbxref=Genbank:WP_040465655.1;Name=WP_040465655.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228253.1;locus_tag=LU631_RS08490;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_040465655.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1614122 1614885 . + . ID=gene-LU631_RS08495;Name=LU631_RS08495;end_range=1614885,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08495;old_locus_tag=LU631_08495;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1614122 1614885 . + 0 ID=cds-LU631_RS08495;Parent=gene-LU631_RS08495;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1614885,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS08495;partial=true;product=transposase domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1614925 1615026 . - . ID=gene-LU631_RS08500;Name=LU631_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08500;old_locus_tag=LU631_08500 NZ_CP089940.1 Protein Homology CDS 1614925 1615026 . - 0 ID=cds-WP_233482025.1;Parent=gene-LU631_RS08500;Dbxref=Genbank:WP_233482025.1;Name=WP_233482025.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021873.2;locus_tag=LU631_RS08500;product=DUF2442 domain-containing protein;protein_id=WP_233482025.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1615179 1615361 . + . ID=gene-LU631_RS08505;Name=LU631_RS08505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08505;old_locus_tag=LU631_08505;partial=true;pseudo=true;start_range=.,1615179 NZ_CP089940.1 Protein Homology CDS 1615179 1615361 . + 0 ID=cds-LU631_RS08505;Parent=gene-LU631_RS08505;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011623097.1;locus_tag=LU631_RS08505;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1615179;transl_table=11 NZ_CP089940.1 RefSeq gene 1616402 1617835 . + . ID=gene-LU631_RS08510;Name=LU631_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08510;old_locus_tag=LU631_08510 NZ_CP089940.1 Protein Homology CDS 1616402 1617835 . + 0 ID=cds-WP_016191594.1;Parent=gene-LU631_RS08510;Dbxref=Genbank:WP_016191594.1;Name=WP_016191594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014605263.1;locus_tag=LU631_RS08510;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_016191594.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1617832 1618560 . + . ID=gene-LU631_RS08515;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=LU631_RS08515;old_locus_tag=LU631_08515 NZ_CP089940.1 Protein Homology CDS 1617832 1618560 . + 0 ID=cds-WP_016191593.1;Parent=gene-LU631_RS08515;Dbxref=Genbank:WP_016191593.1;Name=WP_016191593.1;gbkey=CDS;gene=qseG;inference=COORDINATES: protein motif:HMM:NF007997.0;locus_tag=LU631_RS08515;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_016191593.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1618557 1619891 . + . ID=gene-LU631_RS08520;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=LU631_RS08520;old_locus_tag=LU631_08520 NZ_CP089940.1 Protein Homology CDS 1618557 1619891 . + 0 ID=cds-WP_016191592.1;Parent=gene-LU631_RS08520;Dbxref=Genbank:WP_016191592.1;Name=WP_016191592.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295369.1;locus_tag=LU631_RS08520;product=two-component system response regulator GlrR;protein_id=WP_016191592.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1620033 1620371 . + . ID=gene-LU631_RS08525;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=LU631_RS08525;old_locus_tag=LU631_08525 NZ_CP089940.1 Protein Homology CDS 1620033 1620371 . + 0 ID=cds-WP_016191591.1;Parent=gene-LU631_RS08525;Dbxref=Genbank:WP_016191591.1;Name=WP_016191591.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=LU631_RS08525;product=nitrogen regulatory protein P-II;protein_id=WP_016191591.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1620432 1621610 . - . ID=gene-LU631_RS08530;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=LU631_RS08530;old_locus_tag=LU631_08530 NZ_CP089940.1 Protein Homology CDS 1620432 1621610 . - 0 ID=cds-WP_016191590.1;Parent=gene-LU631_RS08530;Dbxref=Genbank:WP_016191590.1;Name=WP_016191590.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007763267.1;locus_tag=LU631_RS08530;product=NO-inducible flavohemoprotein;protein_id=WP_016191590.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1621805 1621936 . + . ID=gene-LU631_RS26065;Name=LU631_RS26065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26065 NZ_CP089940.1 GeneMarkS-2+ CDS 1621805 1621936 . + 0 ID=cds-WP_256371751.1;Parent=gene-LU631_RS26065;Dbxref=Genbank:WP_256371751.1;Name=WP_256371751.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS26065;product=hypothetical protein;protein_id=WP_256371751.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1621923 1623176 . + . ID=gene-LU631_RS08535;Name=LU631_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08535;old_locus_tag=LU631_08535 NZ_CP089940.1 Protein Homology CDS 1621923 1623176 . + 0 ID=cds-WP_016191589.1;Parent=gene-LU631_RS08535;Dbxref=Genbank:WP_016191589.1;Name=WP_016191589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=LU631_RS08535;product=serine hydroxymethyltransferase;protein_id=WP_016191589.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1623341 1623781 . + . ID=gene-LU631_RS08540;Name=tnpA;end_range=1623781,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS08540;old_locus_tag=LU631_08540;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1623341 1623781 . + 0 ID=cds-LU631_RS08540;Parent=gene-LU631_RS08540;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1623781,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU631_RS08540;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1624012 1624584 . - . ID=gene-LU631_RS08545;Name=LU631_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08545;old_locus_tag=LU631_08545 NZ_CP089940.1 Protein Homology CDS 1624012 1624584 . - 0 ID=cds-WP_051124386.1;Parent=gene-LU631_RS08545;Dbxref=Genbank:WP_051124386.1;Name=WP_051124386.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF013070.2;locus_tag=LU631_RS08545;product=PRD domain-containing protein;protein_id=WP_051124386.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1624692 1625057 . - . ID=gene-LU631_RS08550;Name=LU631_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08550;old_locus_tag=LU631_08550 NZ_CP089940.1 GeneMarkS-2+ CDS 1624692 1625057 . - 0 ID=cds-WP_232426879.1;Parent=gene-LU631_RS08550;Dbxref=Genbank:WP_232426879.1;Name=WP_232426879.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS08550;product=hypothetical protein;protein_id=WP_232426879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1625224 1625832 . + . ID=gene-LU631_RS08555;Name=LU631_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08555;old_locus_tag=LU631_08555 NZ_CP089940.1 Protein Homology CDS 1625224 1625832 . + 0 ID=cds-WP_040465666.1;Parent=gene-LU631_RS08555;Dbxref=Genbank:WP_040465666.1;Name=WP_040465666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803166.1;locus_tag=LU631_RS08555;product=DUF1007 family protein;protein_id=WP_040465666.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1625823 1626818 . + . ID=gene-LU631_RS08560;Name=LU631_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08560;old_locus_tag=LU631_08560 NZ_CP089940.1 Protein Homology CDS 1625823 1626818 . + 0 ID=cds-WP_016191585.1;Parent=gene-LU631_RS08560;Dbxref=Genbank:WP_016191585.1;Name=WP_016191585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803167.1;locus_tag=LU631_RS08560;product=nickel/cobalt transporter;protein_id=WP_016191585.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1626867 1627670 . - . ID=gene-LU631_RS08565;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=LU631_RS08565;old_locus_tag=LU631_08565 NZ_CP089940.1 Protein Homology CDS 1626867 1627670 . - 0 ID=cds-WP_016191584.1;Parent=gene-LU631_RS08565;Dbxref=Genbank:WP_016191584.1;Name=WP_016191584.1;Ontology_term=GO:0046854,GO:0046855,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA,inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311426.1;locus_tag=LU631_RS08565;product=inositol-1-monophosphatase;protein_id=WP_016191584.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1627790 1628518 . + . ID=gene-LU631_RS08570;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=LU631_RS08570;old_locus_tag=LU631_08570 NZ_CP089940.1 Protein Homology CDS 1627790 1628518 . + 0 ID=cds-WP_016191583.1;Parent=gene-LU631_RS08570;Dbxref=Genbank:WP_016191583.1;Name=WP_016191583.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191583.1;locus_tag=LU631_RS08570;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_016191583.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1628683 1629180 . + . ID=gene-LU631_RS08575;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=LU631_RS08575;old_locus_tag=LU631_08575 NZ_CP089940.1 Protein Homology CDS 1628683 1629180 . + 0 ID=cds-WP_016191582.1;Parent=gene-LU631_RS08575;Dbxref=Genbank:WP_016191582.1;Name=WP_016191582.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009638942.1;locus_tag=LU631_RS08575;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_016191582.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1629281 1630435 . + . ID=gene-LU631_RS08580;Name=LU631_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08580;old_locus_tag=LU631_08580 NZ_CP089940.1 Protein Homology CDS 1629281 1630435 . + 0 ID=cds-WP_016191581.1;Parent=gene-LU631_RS08580;Dbxref=Genbank:WP_016191581.1;Name=WP_016191581.1;Ontology_term=GO:0044571,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=[2Fe-2S] cluster assembly|0044571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311423.2;locus_tag=LU631_RS08580;product=IscS subfamily cysteine desulfurase;protein_id=WP_016191581.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1630592 1631875 . + . ID=gene-LU631_RS08585;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=LU631_RS08585;old_locus_tag=LU631_08585 NZ_CP089940.1 Protein Homology CDS 1630592 1631875 . + 0 ID=cds-WP_016191580.1;Parent=gene-LU631_RS08585;Dbxref=Genbank:WP_016191580.1;Name=WP_016191580.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358734.1;locus_tag=LU631_RS08585;product=aminopeptidase PepB;protein_id=WP_016191580.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1631949 1632728 . + . ID=gene-LU631_RS08590;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=LU631_RS08590;old_locus_tag=LU631_08590 NZ_CP089940.1 Protein Homology CDS 1631949 1632728 . + 0 ID=cds-WP_016191579.1;Parent=gene-LU631_RS08590;Dbxref=Genbank:WP_016191579.1;Name=WP_016191579.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203400.1;locus_tag=LU631_RS08590;product=enhanced serine sensitivity protein SseB;protein_id=WP_016191579.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1632830 1633678 . - . ID=gene-LU631_RS08595;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=LU631_RS08595;old_locus_tag=LU631_08595 NZ_CP089940.1 Protein Homology CDS 1632830 1633678 . - 0 ID=cds-WP_016191578.1;Parent=gene-LU631_RS08595;Dbxref=Genbank:WP_016191578.1;Name=WP_016191578.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853206.1;locus_tag=LU631_RS08595;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_016191578.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1634730 1635830 . + . ID=gene-LU631_RS08600;Name=LU631_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08600;old_locus_tag=LU631_08600 NZ_CP089940.1 GeneMarkS-2+ CDS 1634730 1635830 . + 0 ID=cds-WP_040465654.1;Parent=gene-LU631_RS08600;Dbxref=Genbank:WP_040465654.1;Name=WP_040465654.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS08600;product=hypothetical protein;protein_id=WP_040465654.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1635862 1638219 . + . ID=gene-LU631_RS08605;Name=LU631_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08605;old_locus_tag=LU631_08605 NZ_CP089940.1 Protein Homology CDS 1635862 1638219 . + 0 ID=cds-WP_051124384.1;Parent=gene-LU631_RS08605;Dbxref=Genbank:WP_051124384.1;Name=WP_051124384.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: protein motif:HMM:NF015000.2;locus_tag=LU631_RS08605;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_051124384.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1638411 1640570 . - . ID=gene-LU631_RS08610;Name=LU631_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08610;old_locus_tag=LU631_08610 NZ_CP089940.1 Protein Homology CDS 1638411 1640570 . - 0 ID=cds-WP_016191577.1;Parent=gene-LU631_RS08610;Dbxref=Genbank:WP_016191577.1;Name=WP_016191577.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013697.2;locus_tag=LU631_RS08610;product=extracellular solute-binding protein;protein_id=WP_016191577.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1640734 1641552 . + . ID=gene-LU631_RS08615;Name=LU631_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08615;old_locus_tag=LU631_08615 NZ_CP089940.1 Protein Homology CDS 1640734 1641552 . + 0 ID=cds-WP_040465664.1;Parent=gene-LU631_RS08615;Dbxref=Genbank:WP_040465664.1;Name=WP_040465664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099819.1;locus_tag=LU631_RS08615;product=MBL fold metallo-hydrolase;protein_id=WP_040465664.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1641567 1642781 . + . ID=gene-LU631_RS08620;Name=LU631_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08620;old_locus_tag=LU631_08620 NZ_CP089940.1 Protein Homology CDS 1641567 1642781 . + 0 ID=cds-WP_016191575.1;Parent=gene-LU631_RS08620;Dbxref=Genbank:WP_016191575.1;Name=WP_016191575.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016157287.1;locus_tag=LU631_RS08620;product=MFS transporter;protein_id=WP_016191575.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1642909 1643619 . + . ID=gene-LU631_RS08625;Name=LU631_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08625;old_locus_tag=LU631_08625 NZ_CP089940.1 Protein Homology CDS 1642909 1643619 . + 0 ID=cds-WP_040465653.1;Parent=gene-LU631_RS08625;Dbxref=Genbank:WP_040465653.1;Name=WP_040465653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911003.1;locus_tag=LU631_RS08625;product=MgtC/SapB family protein;protein_id=WP_040465653.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1644160 1644591 . + . ID=gene-LU631_RS08630;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=LU631_RS08630;old_locus_tag=LU631_08630 NZ_CP089940.1 Protein Homology CDS 1644160 1644591 . + 0 ID=cds-WP_016191573.1;Parent=gene-LU631_RS08630;Dbxref=Genbank:WP_016191573.1;Name=WP_016191573.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=LU631_RS08630;product=nucleoside-diphosphate kinase;protein_id=WP_016191573.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1644830 1646005 . + . ID=gene-LU631_RS08635;Name=LU631_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08635;old_locus_tag=LU631_08635 NZ_CP089940.1 Protein Homology CDS 1644830 1646005 . + 0 ID=cds-WP_016191572.1;Parent=gene-LU631_RS08635;Dbxref=Genbank:WP_016191572.1;Name=WP_016191572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017347778.1;locus_tag=LU631_RS08635;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_016191572.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1646088 1646825 . + . ID=gene-LU631_RS08640;Name=pilW;gbkey=Gene;gene=pilW;gene_biotype=protein_coding;locus_tag=LU631_RS08640;old_locus_tag=LU631_08640 NZ_CP089940.1 Protein Homology CDS 1646088 1646825 . + 0 ID=cds-WP_016191571.1;Parent=gene-LU631_RS08640;Dbxref=Genbank:WP_016191571.1;Name=WP_016191571.1;Ontology_term=GO:0005515;gbkey=CDS;gene=pilW;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203394.1;locus_tag=LU631_RS08640;product=type IV pilus biogenesis/stability protein PilW;protein_id=WP_016191571.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1646815 1647816 . + . ID=gene-LU631_RS08645;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=LU631_RS08645;old_locus_tag=LU631_08645 NZ_CP089940.1 Protein Homology CDS 1646815 1647816 . + 0 ID=cds-WP_016191570.1;Parent=gene-LU631_RS08645;Dbxref=Genbank:WP_016191570.1;Name=WP_016191570.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106080.1;locus_tag=LU631_RS08645;product=cytoskeleton protein RodZ;protein_id=WP_016191570.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1647854 1648975 . + . ID=gene-LU631_RS08650;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=LU631_RS08650;old_locus_tag=LU631_08650 NZ_CP089940.1 Protein Homology CDS 1647854 1648975 . + 0 ID=cds-WP_016191569.1;Parent=gene-LU631_RS08650;Dbxref=Genbank:WP_016191569.1;Name=WP_016191569.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311404.1;locus_tag=LU631_RS08650;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_016191569.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1649028 1650317 . + . ID=gene-LU631_RS08655;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=LU631_RS08655;old_locus_tag=LU631_08655 NZ_CP089940.1 Protein Homology CDS 1649028 1650317 . + 0 ID=cds-WP_016191568.1;Parent=gene-LU631_RS08655;Dbxref=Genbank:WP_016191568.1;Name=WP_016191568.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358726.1;locus_tag=LU631_RS08655;product=histidine--tRNA ligase;protein_id=WP_016191568.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1650331 1650951 . + . ID=gene-LU631_RS08660;Name=LU631_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08660;old_locus_tag=LU631_08660 NZ_CP089940.1 Protein Homology CDS 1650331 1650951 . + 0 ID=cds-WP_016191567.1;Parent=gene-LU631_RS08660;Dbxref=Genbank:WP_016191567.1;Name=WP_016191567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159105.1;locus_tag=LU631_RS08660;product=YfgM family protein;protein_id=WP_016191567.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1650998 1652179 . + . ID=gene-LU631_RS08665;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=LU631_RS08665;old_locus_tag=LU631_08665 NZ_CP089940.1 Protein Homology CDS 1650998 1652179 . + 0 ID=cds-WP_016191566.1;Parent=gene-LU631_RS08665;Dbxref=Genbank:WP_016191566.1;Name=WP_016191566.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=LU631_RS08665;product=outer membrane protein assembly factor BamB;protein_id=WP_016191566.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1652396 1653880 . + . ID=gene-LU631_RS08670;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=LU631_RS08670;old_locus_tag=LU631_08670 NZ_CP089940.1 Protein Homology CDS 1652396 1653880 . + 0 ID=cds-WP_016191565.1;Parent=gene-LU631_RS08670;Dbxref=Genbank:WP_016191565.1;Name=WP_016191565.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440778.1;locus_tag=LU631_RS08670;product=ribosome biogenesis GTPase Der;protein_id=WP_016191565.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1654104 1654322 . + . ID=gene-LU631_RS08675;Name=LU631_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08675;old_locus_tag=LU631_08675 NZ_CP089940.1 Protein Homology CDS 1654104 1654322 . + 0 ID=cds-WP_016191564.1;Parent=gene-LU631_RS08675;Dbxref=Genbank:WP_016191564.1;Name=WP_016191564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209811.1;locus_tag=LU631_RS08675;product=zinc ribbon domain-containing protein;protein_id=WP_016191564.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1654690 1657122 . + . ID=gene-LU631_RS08680;Name=LU631_RS08680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08680;old_locus_tag=LU631_08680;pseudo=true NZ_CP089940.1 Protein Homology CDS 1654690 1657122 . + 0 ID=cds-LU631_RS08680;Parent=gene-LU631_RS08680;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016161314.1;locus_tag=LU631_RS08680;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1658034 1658655 . - . ID=gene-LU631_RS08685;Name=LU631_RS08685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08685;old_locus_tag=LU631_08685;partial=true;pseudo=true;start_range=.,1658034 NZ_CP089940.1 Protein Homology CDS 1658034 1658655 . - 0 ID=cds-LU631_RS08685;Parent=gene-LU631_RS08685;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007370829.1;locus_tag=LU631_RS08685;partial=true;product=M4 family metallopeptidase;pseudo=true;start_range=.,1658034;transl_table=11 NZ_CP089940.1 RefSeq gene 1658736 1660145 . - . ID=gene-LU631_RS08690;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=LU631_RS08690;old_locus_tag=LU631_08690 NZ_CP089940.1 Protein Homology CDS 1658736 1660145 . - 0 ID=cds-WP_046372405.1;Parent=gene-LU631_RS08690;Dbxref=Genbank:WP_046372405.1;Name=WP_046372405.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848713.1;locus_tag=LU631_RS08690;product=exodeoxyribonuclease VII large subunit;protein_id=WP_046372405.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1660315 1661781 . + . ID=gene-LU631_RS08695;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=LU631_RS08695;old_locus_tag=LU631_08695 NZ_CP089940.1 Protein Homology CDS 1660315 1661781 . + 0 ID=cds-WP_016191559.1;Parent=gene-LU631_RS08695;Dbxref=Genbank:WP_016191559.1;Name=WP_016191559.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=LU631_RS08695;product=IMP dehydrogenase;protein_id=WP_016191559.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1661860 1663440 . + . ID=gene-LU631_RS08700;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=LU631_RS08700;old_locus_tag=LU631_08700 NZ_CP089940.1 Protein Homology CDS 1661860 1663440 . + 0 ID=cds-WP_016191558.1;Parent=gene-LU631_RS08700;Dbxref=Genbank:WP_016191558.1;Name=WP_016191558.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008108317.1;locus_tag=LU631_RS08700;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_016191558.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1663501 1664532 . - . ID=gene-LU631_RS08705;Name=LU631_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08705;old_locus_tag=LU631_08705 NZ_CP089940.1 Protein Homology CDS 1663501 1664532 . - 0 ID=cds-WP_016191557.1;Parent=gene-LU631_RS08705;Dbxref=Genbank:WP_016191557.1;Name=WP_016191557.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS08705;product=IS481 family transposase;protein_id=WP_016191557.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1664816 1665253 . - . ID=gene-LU631_RS08710;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS08710;old_locus_tag=LU631_08710 NZ_CP089940.1 Protein Homology CDS 1664816 1665253 . - 0 ID=cds-WP_046372389.1;Parent=gene-LU631_RS08710;Dbxref=Genbank:WP_046372389.1;Name=WP_046372389.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS08710;product=IS200/IS605 family transposase;protein_id=WP_046372389.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1665562 1665873 . + . ID=gene-LU631_RS08715;Name=LU631_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08715;old_locus_tag=LU631_08715 NZ_CP089940.1 Protein Homology CDS 1665562 1665873 . + 0 ID=cds-WP_233481953.1;Parent=gene-LU631_RS08715;Dbxref=Genbank:WP_233481953.1;Name=WP_233481953.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022362.2;locus_tag=LU631_RS08715;product=DUF2778 domain-containing protein;protein_id=WP_233481953.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1666476 1667173 . + . ID=gene-LU631_RS08720;Name=LU631_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08720;old_locus_tag=LU631_08720 NZ_CP089940.1 Protein Homology CDS 1666476 1666737 . + 0 ID=cds-WP_233482002.1;Parent=gene-LU631_RS08720;Dbxref=Genbank:WP_233482002.1;Name=WP_233482002.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS08720;product=IS1 family transposase;protein_id=WP_233482002.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 1666737 1667173 . + 2 ID=cds-WP_233482002.1;Parent=gene-LU631_RS08720;Dbxref=Genbank:WP_233482002.1;Name=WP_233482002.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS08720;product=IS1 family transposase;protein_id=WP_233482002.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1667734 1669653 . + . ID=gene-LU631_RS08725;Name=LU631_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08725;old_locus_tag=LU631_08725 NZ_CP089940.1 Protein Homology CDS 1667734 1669653 . + 0 ID=cds-WP_016193224.1;Parent=gene-LU631_RS08725;Dbxref=Genbank:WP_016193224.1;Name=WP_016193224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104563.1;locus_tag=LU631_RS08725;product=type VI secretion system tip protein VgrG;protein_id=WP_016193224.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1669759 1670178 . + . ID=gene-LU631_RS08730;Name=LU631_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08730;old_locus_tag=LU631_08730 NZ_CP089940.1 Protein Homology CDS 1669759 1670178 . + 0 ID=cds-WP_016193226.1;Parent=gene-LU631_RS08730;Dbxref=Genbank:WP_016193226.1;Name=WP_016193226.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020366.2;locus_tag=LU631_RS08730;product=DcrB-related protein;protein_id=WP_016193226.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1670228 1675042 . + . ID=gene-LU631_RS08735;Name=LU631_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08735;old_locus_tag=LU631_08735 NZ_CP089940.1 Protein Homology CDS 1670228 1675042 . + 0 ID=cds-WP_082103858.1;Parent=gene-LU631_RS08735;Dbxref=Genbank:WP_082103858.1;Name=WP_082103858.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025768.2;locus_tag=LU631_RS08735;product=PAAR domain-containing protein;protein_id=WP_082103858.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1675051 1675188 . + . ID=gene-LU631_RS08740;Name=LU631_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08740;old_locus_tag=LU631_08740 NZ_CP089940.1 GeneMarkS-2+ CDS 1675051 1675188 . + 0 ID=cds-WP_161797004.1;Parent=gene-LU631_RS08740;Dbxref=Genbank:WP_161797004.1;Name=WP_161797004.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS08740;product=hypothetical protein;protein_id=WP_161797004.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1675267 1676307 . + . ID=gene-LU631_RS08745;Name=LU631_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08745;old_locus_tag=LU631_08745 NZ_CP089940.1 Protein Homology CDS 1675267 1676307 . + 0 ID=cds-WP_046371791.1-5;Parent=gene-LU631_RS08745;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS08745;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1676970 1678170 . + . ID=gene-LU631_RS08750;Name=LU631_RS08750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08750;old_locus_tag=LU631_08750;pseudo=true NZ_CP089940.1 Protein Homology CDS 1676970 1678170 . + 0 ID=cds-LU631_RS08750;Parent=gene-LU631_RS08750;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU631_RS08750;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1678363 1679403 . + . ID=gene-LU631_RS08755;Name=LU631_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08755;old_locus_tag=LU631_08755 NZ_CP089940.1 Protein Homology CDS 1678363 1679403 . + 0 ID=cds-WP_046371818.1-2;Parent=gene-LU631_RS08755;Dbxref=Genbank:WP_046371818.1;Name=WP_046371818.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS08755;product=IS481 family transposase;protein_id=WP_046371818.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1679723 1680049 . - . ID=gene-LU631_RS08760;Name=LU631_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08760;old_locus_tag=LU631_08760 NZ_CP089940.1 GeneMarkS-2+ CDS 1679723 1680049 . - 0 ID=cds-WP_152664309.1;Parent=gene-LU631_RS08760;Dbxref=Genbank:WP_152664309.1;Name=WP_152664309.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS08760;product=hypothetical protein;protein_id=WP_152664309.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1680175 1680462 . - . ID=gene-LU631_RS08765;Name=LU631_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08765;old_locus_tag=LU631_08765 NZ_CP089940.1 GeneMarkS-2+ CDS 1680175 1680462 . - 0 ID=cds-WP_016192991.1;Parent=gene-LU631_RS08765;Dbxref=Genbank:WP_016192991.1;Name=WP_016192991.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS08765;product=hypothetical protein;protein_id=WP_016192991.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1680587 1680829 . - . ID=gene-LU631_RS08770;Name=LU631_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08770;old_locus_tag=LU631_08770 NZ_CP089940.1 GeneMarkS-2+ CDS 1680587 1680829 . - 0 ID=cds-WP_072052882.1;Parent=gene-LU631_RS08770;Dbxref=Genbank:WP_072052882.1;Name=WP_072052882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS08770;product=hypothetical protein;protein_id=WP_072052882.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1680871 1681348 . - . ID=gene-LU631_RS08775;Name=LU631_RS08775;end_range=1681348,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08775;old_locus_tag=LU631_08775;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1680871 1681348 . - 0 ID=cds-LU631_RS08775;Parent=gene-LU631_RS08775;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1681348,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU631_RS08775;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1681344 1681697 . + . ID=gene-LU631_RS08780;Name=LU631_RS08780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08780;old_locus_tag=LU631_08780;partial=true;pseudo=true;start_range=.,1681344 NZ_CP089940.1 Protein Homology CDS 1681344 1681697 . + 0 ID=cds-LU631_RS08780;Parent=gene-LU631_RS08780;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611477.1;locus_tag=LU631_RS08780;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,1681344;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1681690 1682427 . - . ID=gene-LU631_RS08785;Name=LU631_RS08785;end_range=1682427,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08785;old_locus_tag=LU631_08785;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1681690 1682427 . - 0 ID=cds-LU631_RS08785;Parent=gene-LU631_RS08785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=1682427,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324474.1;locus_tag=LU631_RS08785;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1682530 1683570 . + . ID=gene-LU631_RS08790;Name=LU631_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08790;old_locus_tag=LU631_08790 NZ_CP089940.1 Protein Homology CDS 1682530 1683570 . + 0 ID=cds-WP_046371791.1-6;Parent=gene-LU631_RS08790;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS08790;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1683621 1684172 . - . ID=gene-LU631_RS08795;Name=LU631_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08795;old_locus_tag=LU631_08795 NZ_CP089940.1 Protein Homology CDS 1683621 1684172 . - 0 ID=cds-WP_016192989.1;Parent=gene-LU631_RS08795;Dbxref=Genbank:WP_016192989.1;Name=WP_016192989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189958.1;locus_tag=LU631_RS08795;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_016192989.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1684377 1684453 . - . ID=gene-LU631_RS08800;Name=LU631_RS08800;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS08800;old_locus_tag=LU631_08800 NZ_CP089940.1 tRNAscan-SE tRNA 1684377 1684453 . - . ID=rna-LU631_RS08800;Parent=gene-LU631_RS08800;anticodon=(pos:complement(1684417..1684419));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS08800;product=tRNA-Pro NZ_CP089940.1 tRNAscan-SE exon 1684377 1684453 . - . ID=exon-LU631_RS08800-1;Parent=rna-LU631_RS08800;anticodon=(pos:complement(1684417..1684419));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS08800;product=tRNA-Pro NZ_CP089940.1 RefSeq gene 1684548 1686299 . - . ID=gene-LU631_RS08805;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=LU631_RS08805;old_locus_tag=LU631_08805 NZ_CP089940.1 Protein Homology CDS 1684548 1686299 . - 0 ID=cds-WP_016192988.1;Parent=gene-LU631_RS08805;Dbxref=Genbank:WP_016192988.1;Name=WP_016192988.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009089105.1;locus_tag=LU631_RS08805;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_016192988.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1686321 1686548 . - . ID=gene-LU631_RS08810;Name=LU631_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08810;old_locus_tag=LU631_08810 NZ_CP089940.1 Protein Homology CDS 1686321 1686548 . - 0 ID=cds-WP_016192987.1;Parent=gene-LU631_RS08810;Dbxref=Genbank:WP_016192987.1;Name=WP_016192987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004700534.1;locus_tag=LU631_RS08810;product=YejL family protein;protein_id=WP_016192987.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1686709 1687713 . + . ID=gene-LU631_RS08815;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=LU631_RS08815;old_locus_tag=LU631_08815 NZ_CP089940.1 Protein Homology CDS 1686709 1687713 . + 0 ID=cds-WP_016192986.1;Parent=gene-LU631_RS08815;Dbxref=Genbank:WP_016192986.1;Name=WP_016192986.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203036.1;locus_tag=LU631_RS08815;product=nucleoid-associated protein YejK;protein_id=WP_016192986.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1687894 1688178 . - . ID=gene-LU631_RS08820;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=LU631_RS08820;old_locus_tag=LU631_08820 NZ_CP089940.1 Protein Homology CDS 1687894 1688178 . - 0 ID=cds-WP_016192985.1;Parent=gene-LU631_RS08820;Dbxref=Genbank:WP_016192985.1;Name=WP_016192985.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441000.1;locus_tag=LU631_RS08820;product=50S ribosomal protein L25;protein_id=WP_016192985.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1688349 1690103 . - . ID=gene-LU631_RS08825;Name=LU631_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08825;old_locus_tag=LU631_08825 NZ_CP089940.1 Protein Homology CDS 1688349 1690103 . - 0 ID=cds-WP_016192984.1;Parent=gene-LU631_RS08825;Dbxref=Genbank:WP_016192984.1;Name=WP_016192984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227983.1;locus_tag=LU631_RS08825;product=DEAD/DEAH box helicase;protein_id=WP_016192984.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1690310 1691038 . + . ID=gene-LU631_RS08830;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=LU631_RS08830;old_locus_tag=LU631_08830 NZ_CP089940.1 Protein Homology CDS 1690310 1691038 . + 0 ID=cds-WP_016192983.1;Parent=gene-LU631_RS08830;Dbxref=Genbank:WP_016192983.1;Name=WP_016192983.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009089116.1;locus_tag=LU631_RS08830;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_016192983.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1691055 1692239 . + . ID=gene-LU631_RS08835;Name=LU631_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08835;old_locus_tag=LU631_08835 NZ_CP089940.1 Protein Homology CDS 1691055 1692239 . + 0 ID=cds-WP_040465907.1;Parent=gene-LU631_RS08835;Dbxref=Genbank:WP_040465907.1;Name=WP_040465907.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013026454.1;locus_tag=LU631_RS08835;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_040465907.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1692501 1692842 . + . ID=gene-LU631_RS08840;Name=LU631_RS08840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08840;old_locus_tag=LU631_08840;pseudo=true NZ_CP089940.1 Protein Homology CDS 1692501 1692842 . + 0 ID=cds-LU631_RS08840;Parent=gene-LU631_RS08840;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203031.1;locus_tag=LU631_RS08840;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1692865 1694448 . - . ID=gene-LU631_RS08845;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=LU631_RS08845;old_locus_tag=LU631_08845 NZ_CP089940.1 Protein Homology CDS 1692865 1694448 . - 0 ID=cds-WP_016192980.1;Parent=gene-LU631_RS08845;Dbxref=Genbank:WP_016192980.1;Name=WP_016192980.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007762625.1;locus_tag=LU631_RS08845;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_016192980.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1694448 1695464 . - . ID=gene-LU631_RS08850;Name=LU631_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08850;old_locus_tag=LU631_08850 NZ_CP089940.1 Protein Homology CDS 1694448 1695464 . - 0 ID=cds-WP_016192979.1;Parent=gene-LU631_RS08850;Dbxref=Genbank:WP_016192979.1;Name=WP_016192979.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170271.1;locus_tag=LU631_RS08850;product=microcin C ABC transporter permease;protein_id=WP_016192979.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1695461 1696555 . - . ID=gene-LU631_RS08855;Name=LU631_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08855;old_locus_tag=LU631_08855 NZ_CP089940.1 Protein Homology CDS 1695461 1696555 . - 0 ID=cds-WP_016192978.1;Parent=gene-LU631_RS08855;Dbxref=Genbank:WP_016192978.1;Name=WP_016192978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004947087.1;locus_tag=LU631_RS08855;product=microcin C ABC transporter permease YejB;protein_id=WP_016192978.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1696567 1698375 . - . ID=gene-LU631_RS08860;Name=LU631_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08860;old_locus_tag=LU631_08860 NZ_CP089940.1 Protein Homology CDS 1696567 1698375 . - 0 ID=cds-WP_016192977.1;Parent=gene-LU631_RS08860;Dbxref=Genbank:WP_016192977.1;Name=WP_016192977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441008.1;locus_tag=LU631_RS08860;product=extracellular solute-binding protein;protein_id=WP_016192977.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1698555 1699334 . - . ID=gene-LU631_RS08865;Name=LU631_RS08865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08865;old_locus_tag=LU631_08865;partial=true;pseudo=true;start_range=.,1698555 NZ_CP089940.1 Protein Homology CDS 1698555 1699334 . - 0 ID=cds-LU631_RS08865;Parent=gene-LU631_RS08865;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS08865;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,1698555;transl_table=11 NZ_CP089940.1 RefSeq gene 1699487 1700101 . - . ID=gene-LU631_RS08870;Name=LU631_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08870;old_locus_tag=LU631_08870 NZ_CP089940.1 Protein Homology CDS 1699487 1700101 . - 0 ID=cds-WP_161797005.1;Parent=gene-LU631_RS08870;Dbxref=Genbank:WP_161797005.1;Name=WP_161797005.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.2;locus_tag=LU631_RS08870;product=EAL domain-containing protein;protein_id=WP_161797005.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1700457 1700830 . + . ID=gene-LU631_RS08875;Name=LU631_RS08875;end_range=1700830,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08875;old_locus_tag=LU631_08875;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1700457 1700830 . + 0 ID=cds-LU631_RS08875;Parent=gene-LU631_RS08875;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1700830,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU631_RS08875;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1700982 1702196 . - . ID=gene-LU631_RS08880;Name=LU631_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08880;old_locus_tag=LU631_08880 NZ_CP089940.1 Protein Homology CDS 1700982 1702196 . - 0 ID=cds-WP_046371879.1-10;Parent=gene-LU631_RS08880;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS08880;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1702205 1702345 . - . ID=gene-LU631_RS08885;Name=LU631_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08885;old_locus_tag=LU631_08885 NZ_CP089940.1 GeneMarkS-2+ CDS 1702205 1702345 . - 0 ID=cds-WP_161796965.1-9;Parent=gene-LU631_RS08885;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS08885;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1702731 1703060 . + . ID=gene-LU631_RS08890;Name=LU631_RS08890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08890;old_locus_tag=LU631_08890;partial=true;pseudo=true;start_range=.,1702731 NZ_CP089940.1 Protein Homology CDS 1702731 1703060 . + 0 ID=cds-LU631_RS08890;Parent=gene-LU631_RS08890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU631_RS08890;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1702731;transl_table=11 NZ_CP089940.1 RefSeq gene 1703082 1703438 . - . ID=gene-LU631_RS08895;Name=LU631_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08895;old_locus_tag=LU631_08895 NZ_CP089940.1 GeneMarkS-2+ CDS 1703082 1703438 . - 0 ID=cds-WP_016192973.1;Parent=gene-LU631_RS08895;Dbxref=Genbank:WP_016192973.1;Name=WP_016192973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS08895;product=hypothetical protein;protein_id=WP_016192973.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1703435 1703953 . - . ID=gene-LU631_RS08900;Name=LU631_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08900;old_locus_tag=LU631_08900 NZ_CP089940.1 Protein Homology CDS 1703435 1703953 . - 0 ID=cds-WP_016192972.1;Parent=gene-LU631_RS08900;Dbxref=Genbank:WP_016192972.1;Name=WP_016192972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003834597.1;locus_tag=LU631_RS08900;product=hypothetical protein;protein_id=WP_016192972.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1704185 1704544 . + . ID=gene-LU631_RS08905;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS08905;old_locus_tag=LU631_08905 NZ_CP089940.1 Protein Homology CDS 1704185 1704544 . + 0 ID=cds-WP_233482026.1;Parent=gene-LU631_RS08905;Dbxref=Genbank:WP_233482026.1;Name=WP_233482026.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU631_RS08905;product=IS200/IS605 family transposase;protein_id=WP_233482026.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1704741 1706753 . + . ID=gene-LU631_RS08910;Name=LU631_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08910;old_locus_tag=LU631_08910 NZ_CP089940.1 Protein Homology CDS 1704741 1706753 . + 0 ID=cds-WP_233482027.1;Parent=gene-LU631_RS08910;Dbxref=Genbank:WP_233482027.1;Name=WP_233482027.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649526.1;locus_tag=LU631_RS08910;product=DNA polymerase;protein_id=WP_233482027.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1706759 1707436 . + . ID=gene-LU631_RS08915;Name=LU631_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08915;old_locus_tag=LU631_08915 NZ_CP089940.1 GeneMarkS-2+ CDS 1706759 1707436 . + 0 ID=cds-WP_016192970.1;Parent=gene-LU631_RS08915;Dbxref=Genbank:WP_016192970.1;Name=WP_016192970.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS08915;product=hypothetical protein;protein_id=WP_016192970.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1707433 1707645 . + . ID=gene-LU631_RS08920;Name=LU631_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08920;old_locus_tag=LU631_08920 NZ_CP089940.1 Protein Homology CDS 1707433 1707645 . + 0 ID=cds-WP_016192969.1;Parent=gene-LU631_RS08920;Dbxref=Genbank:WP_016192969.1;Name=WP_016192969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000873865.1;locus_tag=LU631_RS08920;product=hypothetical protein;protein_id=WP_016192969.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1707661 1707891 . + . ID=gene-LU631_RS08925;Name=LU631_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08925;old_locus_tag=LU631_08925 NZ_CP089940.1 Protein Homology CDS 1707661 1707891 . + 0 ID=cds-WP_016192968.1;Parent=gene-LU631_RS08925;Dbxref=Genbank:WP_016192968.1;Name=WP_016192968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303790.1;locus_tag=LU631_RS08925;product=ANR family transcriptional regulator;protein_id=WP_016192968.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1707875 1708177 . + . ID=gene-LU631_RS08930;Name=LU631_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08930;old_locus_tag=LU631_08930 NZ_CP089940.1 Protein Homology CDS 1707875 1708177 . + 0 ID=cds-WP_016192967.1;Parent=gene-LU631_RS08930;Dbxref=Genbank:WP_016192967.1;Name=WP_016192967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192967.1;locus_tag=LU631_RS08930;product=VRR-NUC domain-containing protein;protein_id=WP_016192967.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1708403 1709710 . + . ID=gene-LU631_RS08935;Name=LU631_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08935;old_locus_tag=LU631_08935 NZ_CP089940.1 Protein Homology CDS 1708403 1709710 . + 0 ID=cds-WP_232426935.1;Parent=gene-LU631_RS08935;Dbxref=Genbank:WP_232426935.1;Name=WP_232426935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120529.1;locus_tag=LU631_RS08935;product=DEAD/DEAH box helicase;protein_id=WP_232426935.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1709707 1709958 . + . ID=gene-LU631_RS08940;Name=LU631_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08940;old_locus_tag=LU631_08940 NZ_CP089940.1 Protein Homology CDS 1709707 1709958 . + 0 ID=cds-WP_016192965.1;Parent=gene-LU631_RS08940;Dbxref=Genbank:WP_016192965.1;Name=WP_016192965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619014.1;locus_tag=LU631_RS08940;product=pyocin activator PrtN family protein;protein_id=WP_016192965.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1709997 1710125 . - . ID=gene-LU631_RS08945;Name=LU631_RS08945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08945;old_locus_tag=LU631_08945;partial=true;pseudo=true;start_range=.,1709997 NZ_CP089940.1 Protein Homology CDS 1709997 1710125 . - 0 ID=cds-LU631_RS08945;Parent=gene-LU631_RS08945;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004387449.1;locus_tag=LU631_RS08945;partial=true;product=YkgJ family cysteine cluster protein;pseudo=true;start_range=.,1709997;transl_table=11 NZ_CP089940.1 RefSeq gene 1710313 1710885 . + . ID=gene-LU631_RS08950;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=LU631_RS08950;old_locus_tag=LU631_08950 NZ_CP089940.1 Protein Homology CDS 1710313 1710885 . + 0 ID=cds-WP_016192964.1;Parent=gene-LU631_RS08950;Dbxref=Genbank:WP_016192964.1;Name=WP_016192964.1;Ontology_term=GO:0006414,GO:0043043,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA,peptide biosynthetic process|0043043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010617971.1;locus_tag=LU631_RS08950;product=elongation factor P-like protein YeiP;protein_id=WP_016192964.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1710957 1711256 . - . ID=gene-LU631_RS08955;Name=LU631_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08955;old_locus_tag=LU631_08955 NZ_CP089940.1 Protein Homology CDS 1710957 1711256 . - 0 ID=cds-WP_016192963.1;Parent=gene-LU631_RS08955;Dbxref=Genbank:WP_016192963.1;Name=WP_016192963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012849126.1;locus_tag=LU631_RS08955;product=hypothetical protein;protein_id=WP_016192963.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1711557 1711771 . + . ID=gene-LU631_RS08960;Name=LU631_RS08960;end_range=1711771,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08960;old_locus_tag=LU631_08960;partial=true;pseudo=true;start_range=.,1711557 NZ_CP089940.1 Protein Homology CDS 1711557 1711771 . + 0 ID=cds-LU631_RS08960;Parent=gene-LU631_RS08960;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1711771,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005161835.1;locus_tag=LU631_RS08960;partial=true;product=phosphatase PAP2 family protein;pseudo=true;start_range=.,1711557;transl_table=11 NZ_CP089940.1 RefSeq gene 1711974 1712671 . + . ID=gene-LU631_RS08965;Name=LU631_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08965;old_locus_tag=LU631_08965 NZ_CP089940.1 Protein Homology CDS 1711974 1712235 . + 0 ID=cds-WP_233482003.1;Parent=gene-LU631_RS08965;Dbxref=Genbank:WP_233482003.1;Name=WP_233482003.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS08965;product=IS1 family transposase;protein_id=WP_233482003.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 1712235 1712671 . + 2 ID=cds-WP_233482003.1;Parent=gene-LU631_RS08965;Dbxref=Genbank:WP_233482003.1;Name=WP_233482003.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS08965;product=IS1 family transposase;protein_id=WP_233482003.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1713043 1713618 . + . ID=gene-LU631_RS08970;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=LU631_RS08970;old_locus_tag=LU631_08970 NZ_CP089940.1 Protein Homology CDS 1713043 1713618 . + 0 ID=cds-WP_016192961.1;Parent=gene-LU631_RS08970;Dbxref=Genbank:WP_016192961.1;Name=WP_016192961.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158446.1;locus_tag=LU631_RS08970;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_016192961.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1713727 1713858 . - . ID=gene-LU631_RS08975;Name=LU631_RS08975;end_range=1713858,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08975;old_locus_tag=LU631_08975;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1713727 1713858 . - 0 ID=cds-LU631_RS08975;Parent=gene-LU631_RS08975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1713858,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322889.1;locus_tag=LU631_RS08975;partial=true;product=cell wall-binding protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1713913 1714608 . + . ID=gene-LU631_RS08980;Name=LU631_RS08980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS08980;old_locus_tag=LU631_08980;pseudo=true NZ_CP089940.1 Protein Homology CDS 1713913 1714608 . + 0 ID=cds-LU631_RS08980;Parent=gene-LU631_RS08980;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=LU631_RS08980;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1714932 1715123 . + . ID=gene-LU631_RS08985;Name=LU631_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08985;old_locus_tag=LU631_08985 NZ_CP089940.1 Protein Homology CDS 1714932 1715123 . + 0 ID=cds-WP_016192958.1;Parent=gene-LU631_RS08985;Dbxref=Genbank:WP_016192958.1;Name=WP_016192958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150493.1;locus_tag=LU631_RS08985;product=hypothetical protein;protein_id=WP_016192958.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1715428 1715865 . + . ID=gene-LU631_RS08990;Name=LU631_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08990;old_locus_tag=LU631_08990 NZ_CP089940.1 Protein Homology CDS 1715428 1715865 . + 0 ID=cds-WP_016192957.1;Parent=gene-LU631_RS08990;Dbxref=Genbank:WP_016192957.1;Name=WP_016192957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015974446.1;locus_tag=LU631_RS08990;product=P27 family phage terminase small subunit;protein_id=WP_016192957.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1715964 1716215 . + . ID=gene-LU631_RS08995;Name=LU631_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS08995;old_locus_tag=LU631_08995 NZ_CP089940.1 Protein Homology CDS 1715964 1716215 . + 0 ID=cds-WP_016192956.1;Parent=gene-LU631_RS08995;Dbxref=Genbank:WP_016192956.1;Name=WP_016192956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668961.1;locus_tag=LU631_RS08995;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_016192956.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1716218 1716649 . + . ID=gene-LU631_RS09000;Name=LU631_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09000;old_locus_tag=LU631_09000 NZ_CP089940.1 Protein Homology CDS 1716218 1716649 . + 0 ID=cds-WP_040465898.1;Parent=gene-LU631_RS09000;Dbxref=Genbank:WP_040465898.1;Name=WP_040465898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012987825.1;locus_tag=LU631_RS09000;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_040465898.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1716702 1717667 . + . ID=gene-LU631_RS09005;Name=LU631_RS09005;end_range=1717667,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09005;old_locus_tag=LU631_09005;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1716702 1717667 . + 0 ID=cds-LU631_RS09005;Parent=gene-LU631_RS09005;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1717667,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003841968.1;locus_tag=LU631_RS09005;partial=true;product=terminase large subunit;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1717715 1718412 . + . ID=gene-LU631_RS09010;Name=LU631_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09010;old_locus_tag=LU631_09010 NZ_CP089940.1 Protein Homology CDS 1717715 1717976 . + 0 ID=cds-WP_233482004.1;Parent=gene-LU631_RS09010;Dbxref=Genbank:WP_233482004.1;Name=WP_233482004.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS09010;product=IS1 family transposase;protein_id=WP_233482004.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 1717976 1718412 . + 2 ID=cds-WP_233482004.1;Parent=gene-LU631_RS09010;Dbxref=Genbank:WP_233482004.1;Name=WP_233482004.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS09010;product=IS1 family transposase;protein_id=WP_233482004.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1718451 1718741 . + . ID=gene-LU631_RS09015;Name=LU631_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09015;old_locus_tag=LU631_09015 NZ_CP089940.1 Protein Homology CDS 1718451 1718741 . + 0 ID=cds-WP_040465897.1;Parent=gene-LU631_RS09015;Dbxref=Genbank:WP_040465897.1;Name=WP_040465897.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017717.2;locus_tag=LU631_RS09015;product=AlpA family phage regulatory protein;protein_id=WP_040465897.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1718847 1720095 . + . ID=gene-LU631_RS09020;Name=LU631_RS09020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09020;old_locus_tag=LU631_09020;pseudo=true NZ_CP089940.1 Protein Homology CDS 1718847 1720095 . + 0 ID=cds-LU631_RS09020;Parent=gene-LU631_RS09020;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710169.1;locus_tag=LU631_RS09020;product=primase-like DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1720454 1720696 . + . ID=gene-LU631_RS09025;Name=LU631_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09025;old_locus_tag=LU631_09025 NZ_CP089940.1 GeneMarkS-2+ CDS 1720454 1720696 . + 0 ID=cds-WP_016192952.1;Parent=gene-LU631_RS09025;Dbxref=Genbank:WP_016192952.1;Name=WP_016192952.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09025;product=hypothetical protein;protein_id=WP_016192952.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1721411 1722631 . + . ID=gene-LU631_RS09030;Name=LU631_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09030;old_locus_tag=LU631_09030 NZ_CP089940.1 Protein Homology CDS 1721411 1722631 . + 0 ID=cds-WP_046371806.1-6;Parent=gene-LU631_RS09030;Dbxref=Genbank:WP_046371806.1;Name=WP_046371806.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025244073.1;locus_tag=LU631_RS09030;product=ISL3 family transposase;protein_id=WP_046371806.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1722722 1723762 . - . ID=gene-LU631_RS09035;Name=LU631_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09035;old_locus_tag=LU631_09035 NZ_CP089940.1 Protein Homology CDS 1722722 1723762 . - 0 ID=cds-WP_046371791.1-7;Parent=gene-LU631_RS09035;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS09035;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1723838 1724101 . + . ID=gene-LU631_RS09040;Name=LU631_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09040;old_locus_tag=LU631_09040 NZ_CP089940.1 Protein Homology CDS 1723838 1724101 . + 0 ID=cds-WP_072052884.1;Parent=gene-LU631_RS09040;Dbxref=Genbank:WP_072052884.1;Name=WP_072052884.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019023.2;locus_tag=LU631_RS09040;product=DUF1493 family protein;protein_id=WP_072052884.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1724342 1725514 . + . ID=gene-LU631_RS09045;Name=LU631_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09045;old_locus_tag=LU631_09045 NZ_CP089940.1 Protein Homology CDS 1724342 1725514 . + 0 ID=cds-WP_016192949.1;Parent=gene-LU631_RS09045;Dbxref=Genbank:WP_016192949.1;Name=WP_016192949.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229112.1;locus_tag=LU631_RS09045;product=phage major capsid protein;protein_id=WP_016192949.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1725594 1726298 . - . ID=gene-LU631_RS09050;Name=LU631_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09050;old_locus_tag=LU631_09050 NZ_CP089940.1 Protein Homology CDS 1725594 1726298 . - 0 ID=cds-WP_046372393.1;Parent=gene-LU631_RS09050;Dbxref=Genbank:WP_046372393.1;Name=WP_046372393.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU631_RS09050;product=IS6 family transposase;protein_id=WP_046372393.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1726422 1726847 . + . ID=gene-LU631_RS09055;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS09055;old_locus_tag=LU631_09055 NZ_CP089940.1 Protein Homology CDS 1726422 1726847 . + 0 ID=cds-WP_016192948.1;Parent=gene-LU631_RS09055;Dbxref=Genbank:WP_016192948.1;Name=WP_016192948.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064919.1;locus_tag=LU631_RS09055;product=IS200/IS605 family transposase;protein_id=WP_016192948.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1727038 1727568 . - . ID=gene-LU631_RS09060;Name=LU631_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09060;old_locus_tag=LU631_09060 NZ_CP089940.1 Protein Homology CDS 1727038 1727568 . - 0 ID=cds-WP_016192947.1;Parent=gene-LU631_RS09060;Dbxref=Genbank:WP_016192947.1;Name=WP_016192947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010671743.1;locus_tag=LU631_RS09060;product=DUF2778 domain-containing protein;protein_id=WP_016192947.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1728028 1728725 . - . ID=gene-LU631_RS09065;Name=LU631_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09065;old_locus_tag=LU631_09065 NZ_CP089940.1 Protein Homology CDS 1728476 1728725 . - 0 ID=cds-WP_233482005.1;Parent=gene-LU631_RS09065;Dbxref=Genbank:WP_233482005.1;Name=WP_233482005.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS09065;product=IS1 family transposase;protein_id=WP_233482005.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 1728028 1728476 . - 2 ID=cds-WP_233482005.1;Parent=gene-LU631_RS09065;Dbxref=Genbank:WP_233482005.1;Name=WP_233482005.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS09065;product=IS1 family transposase;protein_id=WP_233482005.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1729121 1729381 . - . ID=gene-LU631_RS09070;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=LU631_RS09070;old_locus_tag=LU631_09070 NZ_CP089940.1 Protein Homology CDS 1729121 1729381 . - 0 ID=cds-WP_016192946.1;Parent=gene-LU631_RS09070;Dbxref=Genbank:WP_016192946.1;Name=WP_016192946.1;gbkey=CDS;gene=repA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529614.1;locus_tag=LU631_RS09070;product=replication regulatory protein RepA;protein_id=WP_016192946.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1729528 1730091 . - . ID=gene-LU631_RS09075;Name=LU631_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09075;old_locus_tag=LU631_09075 NZ_CP089940.1 Protein Homology CDS 1729528 1730091 . - 0 ID=cds-WP_040465895.1;Parent=gene-LU631_RS09075;Dbxref=Genbank:WP_040465895.1;Name=WP_040465895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008324931.1;locus_tag=LU631_RS09075;product=phospholipase D family protein;protein_id=WP_040465895.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1730257 1730529 . + . ID=gene-LU631_RS09080;Name=LU631_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09080;old_locus_tag=LU631_09080 NZ_CP089940.1 Protein Homology CDS 1730257 1730529 . + 0 ID=cds-WP_233482006.1;Parent=gene-LU631_RS09080;Dbxref=Genbank:WP_233482006.1;Name=WP_233482006.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022590.2;locus_tag=LU631_RS09080;product=DUF2913 family protein;protein_id=WP_233482006.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1730621 1731262 . + . ID=gene-LU631_RS09085;Name=LU631_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09085;old_locus_tag=LU631_09085 NZ_CP089940.1 Protein Homology CDS 1730621 1731262 . + 0 ID=cds-WP_046372395.1;Parent=gene-LU631_RS09085;Dbxref=Genbank:WP_046372395.1;Name=WP_046372395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539947.1;locus_tag=LU631_RS09085;product=recombinase family protein;protein_id=WP_046372395.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1731330 1737941 . + . ID=gene-LU631_RS09090;Name=LU631_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09090;old_locus_tag=LU631_09090 NZ_CP089940.1 Protein Homology CDS 1731330 1737941 . + 0 ID=cds-WP_052734743.1;Parent=gene-LU631_RS09090;Dbxref=Genbank:WP_052734743.1;Name=WP_052734743.1;Ontology_term=GO:0008294,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_function=calcium- and calmodulin-responsive adenylate cyclase activity|0008294||IEA;inference=COORDINATES: protein motif:HMM:NF015462.2;locus_tag=LU631_RS09090;product=anthrax toxin-like adenylyl cyclase domain-containing protein;protein_id=WP_052734743.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1738183 1739001 . + . ID=gene-LU631_RS09095;Name=LU631_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09095;old_locus_tag=LU631_09095 NZ_CP089940.1 Protein Homology CDS 1738183 1739001 . + 0 ID=cds-WP_051124417.1;Parent=gene-LU631_RS09095;Dbxref=Genbank:WP_051124417.1;Name=WP_051124417.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012606.2;locus_tag=LU631_RS09095;product=phosphatidylinositol-specific phospholipase C domain-containing protein;protein_id=WP_051124417.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1739503 1740096 . + . ID=gene-LU631_RS09100;Name=LU631_RS09100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09100;old_locus_tag=LU631_09100;partial=true;pseudo=true;start_range=.,1739503 NZ_CP089940.1 Protein Homology CDS 1739503 1740096 . + 0 ID=cds-LU631_RS09100;Parent=gene-LU631_RS09100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495017.1;locus_tag=LU631_RS09100;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,1739503;transl_table=11 NZ_CP089940.1 RefSeq gene 1740374 1740706 . + . ID=gene-LU631_RS09105;Name=LU631_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09105;old_locus_tag=LU631_09105 NZ_CP089940.1 Protein Homology CDS 1740374 1740706 . + 0 ID=cds-WP_016192940.1;Parent=gene-LU631_RS09105;Dbxref=Genbank:WP_016192940.1;Name=WP_016192940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852044.1;locus_tag=LU631_RS09105;product=hypothetical protein;protein_id=WP_016192940.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1740681 1741484 . - . ID=gene-LU631_RS09110;Name=LU631_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09110;old_locus_tag=LU631_09110 NZ_CP089940.1 Protein Homology CDS 1740681 1741484 . - 0 ID=cds-WP_016192939.1;Parent=gene-LU631_RS09110;Dbxref=Genbank:WP_016192939.1;Name=WP_016192939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831943.1;locus_tag=LU631_RS09110;product=DUF4225 domain-containing protein;protein_id=WP_016192939.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1741936 1743381 . + . ID=gene-LU631_RS09115;Name=LU631_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09115;old_locus_tag=LU631_09115 NZ_CP089940.1 Protein Homology CDS 1741936 1743381 . + 0 ID=cds-WP_161797006.1;Parent=gene-LU631_RS09115;Dbxref=Genbank:WP_161797006.1;Name=WP_161797006.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03760.1;locus_tag=LU631_RS09115;product=TraI domain-containing protein;protein_id=WP_161797006.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1743406 1743648 . + . ID=gene-LU631_RS09120;Name=LU631_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09120;old_locus_tag=LU631_09120 NZ_CP089940.1 Protein Homology CDS 1743406 1743648 . + 0 ID=cds-WP_020322900.1-2;Parent=gene-LU631_RS09120;Dbxref=Genbank:WP_020322900.1;Name=WP_020322900.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022183.2;locus_tag=LU631_RS09120;product=hypothetical protein;protein_id=WP_020322900.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1743910 1744614 . - . ID=gene-LU631_RS09125;Name=LU631_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09125;old_locus_tag=LU631_09125 NZ_CP089940.1 Protein Homology CDS 1743910 1744614 . - 0 ID=cds-WP_046372397.1;Parent=gene-LU631_RS09125;Dbxref=Genbank:WP_046372397.1;Name=WP_046372397.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU631_RS09125;product=IS6 family transposase;protein_id=WP_046372397.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1744681 1745214 . - . ID=gene-LU631_RS09130;Name=LU631_RS09130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09130;old_locus_tag=LU631_09130;partial=true;pseudo=true;start_range=.,1744681 NZ_CP089940.1 Protein Homology CDS 1744681 1745214 . - 0 ID=cds-LU631_RS09130;Parent=gene-LU631_RS09130;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332260.1;locus_tag=LU631_RS09130;partial=true;product=site-specific integrase;pseudo=true;start_range=.,1744681;transl_table=11 NZ_CP089940.1 RefSeq gene 1745491 1746624 . + . ID=gene-LU631_RS09135;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=LU631_RS09135;old_locus_tag=LU631_09135 NZ_CP089940.1 Protein Homology CDS 1745491 1746624 . + 0 ID=cds-WP_016192935.1;Parent=gene-LU631_RS09135;Dbxref=Genbank:WP_016192935.1;Name=WP_016192935.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441014.1;locus_tag=LU631_RS09135;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_016192935.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1746621 1747559 . + . ID=gene-LU631_RS09140;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=LU631_RS09140;old_locus_tag=LU631_09140 NZ_CP089940.1 Protein Homology CDS 1746621 1747559 . + 0 ID=cds-WP_016192934.1;Parent=gene-LU631_RS09140;Dbxref=Genbank:WP_016192934.1;Name=WP_016192934.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203017.1;locus_tag=LU631_RS09140;product=1-phosphofructokinase;protein_id=WP_016192934.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1747575 1749275 . + . ID=gene-LU631_RS09145;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=LU631_RS09145;old_locus_tag=LU631_09145 NZ_CP089940.1 Protein Homology CDS 1747575 1749275 . + 0 ID=cds-WP_016192933.1;Parent=gene-LU631_RS09145;Dbxref=Genbank:WP_016192933.1;Name=WP_016192933.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158436.1;locus_tag=LU631_RS09145;product=PTS fructose transporter subunit IIBC;protein_id=WP_016192933.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1749940 1750380 . - . ID=gene-LU631_RS09150;Name=LU631_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09150;old_locus_tag=LU631_09150 NZ_CP089940.1 GeneMarkS-2+ CDS 1749940 1750380 . - 0 ID=cds-WP_016192932.1;Parent=gene-LU631_RS09150;Dbxref=Genbank:WP_016192932.1;Name=WP_016192932.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09150;product=hypothetical protein;protein_id=WP_016192932.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1750406 1751248 . - . ID=gene-LU631_RS09155;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=LU631_RS09155;old_locus_tag=LU631_09155 NZ_CP089940.1 Protein Homology CDS 1750406 1751248 . - 0 ID=cds-WP_016192931.1;Parent=gene-LU631_RS09155;Dbxref=Genbank:WP_016192931.1;Name=WP_016192931.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008459928.1;locus_tag=LU631_RS09155;product=deoxyribonuclease IV;protein_id=WP_016192931.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1751315 1752403 . - . ID=gene-LU631_RS09160;Name=LU631_RS09160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09160;old_locus_tag=LU631_09160;pseudo=true NZ_CP089940.1 Protein Homology CDS 1751315 1752403 . - 0 ID=cds-LU631_RS09160;Parent=gene-LU631_RS09160;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799429.1;locus_tag=LU631_RS09160;product=YeiH family putative sulfate export transporter;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1752501 1753373 . + . ID=gene-LU631_RS09165;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=LU631_RS09165;old_locus_tag=LU631_09165 NZ_CP089940.1 Protein Homology CDS 1752501 1753373 . + 0 ID=cds-WP_016192928.1;Parent=gene-LU631_RS09165;Dbxref=Genbank:WP_016192928.1;Name=WP_016192928.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373161.1;locus_tag=LU631_RS09165;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_016192928.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1753539 1755014 . + . ID=gene-LU631_RS09170;Name=LU631_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09170;old_locus_tag=LU631_09170 NZ_CP089940.1 Protein Homology CDS 1753539 1755014 . + 0 ID=cds-WP_016192927.1;Parent=gene-LU631_RS09170;Dbxref=Genbank:WP_016192927.1;Name=WP_016192927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227958.1;locus_tag=LU631_RS09170;product=amino acid permease;protein_id=WP_016192927.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1755123 1756205 . + . ID=gene-LU631_RS09175;Name=LU631_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09175;old_locus_tag=LU631_09175 NZ_CP089940.1 Protein Homology CDS 1755123 1756205 . + 0 ID=cds-WP_016192926.1;Parent=gene-LU631_RS09175;Dbxref=Genbank:WP_016192926.1;Name=WP_016192926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673046.1;locus_tag=LU631_RS09175;product=iron ABC transporter permease;protein_id=WP_016192926.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1756202 1756990 . + . ID=gene-LU631_RS09180;Name=LU631_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09180;old_locus_tag=LU631_09180 NZ_CP089940.1 Protein Homology CDS 1756202 1756990 . + 0 ID=cds-WP_087949740.1;Parent=gene-LU631_RS09180;Dbxref=Genbank:WP_087949740.1;Name=WP_087949740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208783.1;locus_tag=LU631_RS09180;product=ABC transporter ATP-binding protein;protein_id=WP_087949740.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1757033 1757875 . - . ID=gene-LU631_RS09185;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=LU631_RS09185;old_locus_tag=LU631_09185 NZ_CP089940.1 Protein Homology CDS 1757033 1757875 . - 0 ID=cds-WP_016192924.1;Parent=gene-LU631_RS09185;Dbxref=Genbank:WP_016192924.1;Name=WP_016192924.1;Ontology_term=GO:0046292,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010671004.1;locus_tag=LU631_RS09185;product=S-formylglutathione hydrolase;protein_id=WP_016192924.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1757888 1759012 . - . ID=gene-LU631_RS09190;Name=LU631_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09190;old_locus_tag=LU631_09190 NZ_CP089940.1 Protein Homology CDS 1757888 1759012 . - 0 ID=cds-WP_016192923.1;Parent=gene-LU631_RS09190;Dbxref=Genbank:WP_016192923.1;Name=WP_016192923.1;Ontology_term=GO:0006113,GO:0009404,GO:0004024,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,S-(hydroxymethyl)glutathione dehydrogenase activity|0051903||IEA;go_process=fermentation|0006113||IEA,toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010248270.1;locus_tag=LU631_RS09190;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_016192923.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1759771 1760991 . - . ID=gene-LU631_RS09195;Name=LU631_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09195;old_locus_tag=LU631_09195 NZ_CP089940.1 Protein Homology CDS 1759771 1760991 . - 0 ID=cds-WP_046371929.1-2;Parent=gene-LU631_RS09195;Dbxref=Genbank:WP_046371929.1;Name=WP_046371929.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343765.1;locus_tag=LU631_RS09195;product=ISL3 family transposase;protein_id=WP_046371929.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1761025 1761732 . - . ID=gene-LU631_RS09200;Name=LU631_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09200;old_locus_tag=LU631_09200 NZ_CP089940.1 Protein Homology CDS 1761025 1761732 . - 0 ID=cds-WP_046372137.1-2;Parent=gene-LU631_RS09200;Dbxref=Genbank:WP_046372137.1;Name=WP_046372137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308877.1;locus_tag=LU631_RS09200;product=M91 family zinc metallopeptidase;protein_id=WP_046372137.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1761784 1762530 . + . ID=gene-LU631_RS09205;Name=LU631_RS09205;end_range=1762530,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09205;old_locus_tag=LU631_09205;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1761784 1762530 . + 0 ID=cds-LU631_RS09205;Parent=gene-LU631_RS09205;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006306,GO:0003677,GO:0008170;end_range=1762530,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000578748.1;locus_tag=LU631_RS09205;partial=true;product=DNA methyltransferase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1762590 1763630 . - . ID=gene-LU631_RS09210;Name=LU631_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09210;old_locus_tag=LU631_09210 NZ_CP089940.1 Protein Homology CDS 1762590 1763630 . - 0 ID=cds-WP_046371797.1;Parent=gene-LU631_RS09210;Dbxref=Genbank:WP_046371797.1;Name=WP_046371797.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS09210;product=IS481 family transposase;protein_id=WP_046371797.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1763714 1764004 . - . ID=gene-LU631_RS09215;Name=LU631_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09215;old_locus_tag=LU631_09215 NZ_CP089940.1 GeneMarkS-2+ CDS 1763714 1764004 . - 0 ID=cds-WP_052734744.1;Parent=gene-LU631_RS09215;Dbxref=Genbank:WP_052734744.1;Name=WP_052734744.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09215;product=hypothetical protein;protein_id=WP_052734744.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1764174 1764482 . + . ID=gene-LU631_RS09220;Name=LU631_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09220;old_locus_tag=LU631_09220 NZ_CP089940.1 Protein Homology CDS 1764174 1764482 . + 0 ID=cds-WP_046372149.1-2;Parent=gene-LU631_RS09220;Dbxref=Genbank:WP_046372149.1;Name=WP_046372149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814359.1;locus_tag=LU631_RS09220;product=phage holin family protein;protein_id=WP_046372149.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1764472 1765011 . + . ID=gene-LU631_RS09225;Name=LU631_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09225;old_locus_tag=LU631_09225 NZ_CP089940.1 Protein Homology CDS 1764472 1765011 . + 0 ID=cds-WP_016193236.1-2;Parent=gene-LU631_RS09225;Dbxref=Genbank:WP_016193236.1;Name=WP_016193236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001504514.1;locus_tag=LU631_RS09225;product=NUMOD4 motif-containing HNH endonuclease;protein_id=WP_016193236.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1765008 1765433 . + . ID=gene-LU631_RS09230;Name=LU631_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09230;old_locus_tag=LU631_09230 NZ_CP089940.1 Protein Homology CDS 1765008 1765433 . + 0 ID=cds-WP_016193237.1-2;Parent=gene-LU631_RS09230;Dbxref=Genbank:WP_016193237.1;Name=WP_016193237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117831.1;locus_tag=LU631_RS09230;product=lysozyme;protein_id=WP_016193237.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1765626 1765823 . + . ID=gene-LU631_RS09235;Name=LU631_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09235;old_locus_tag=LU631_09235 NZ_CP089940.1 Protein Homology CDS 1765626 1765823 . + 0 ID=cds-WP_071598980.1-2;Parent=gene-LU631_RS09235;Dbxref=Genbank:WP_071598980.1;Name=WP_071598980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012578895.1;locus_tag=LU631_RS09235;product=Rz1 family lipoprotein;protein_id=WP_071598980.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1765919 1766668 . + . ID=gene-LU631_RS09240;Name=LU631_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09240;old_locus_tag=LU631_09240 NZ_CP089940.1 GeneMarkS-2+ CDS 1765919 1766668 . + 0 ID=cds-WP_233481544.1;Parent=gene-LU631_RS09240;Dbxref=Genbank:WP_233481544.1;Name=WP_233481544.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09240;product=hypothetical protein;protein_id=WP_233481544.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1766678 1767106 . + . ID=gene-LU631_RS09245;Name=LU631_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09245;old_locus_tag=LU631_09245 NZ_CP089940.1 GeneMarkS-2+ CDS 1766678 1767106 . + 0 ID=cds-WP_046372151.1-2;Parent=gene-LU631_RS09245;Dbxref=Genbank:WP_046372151.1;Name=WP_046372151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09245;product=hypothetical protein;protein_id=WP_046372151.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1767124 1767378 . + . ID=gene-LU631_RS09250;Name=LU631_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09250;old_locus_tag=LU631_09250 NZ_CP089940.1 GeneMarkS-2+ CDS 1767124 1767378 . + 0 ID=cds-WP_046372399.1;Parent=gene-LU631_RS09250;Dbxref=Genbank:WP_046372399.1;Name=WP_046372399.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09250;product=hypothetical protein;protein_id=WP_046372399.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1767384 1767863 . + . ID=gene-LU631_RS09255;Name=LU631_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09255;old_locus_tag=LU631_09255 NZ_CP089940.1 Protein Homology CDS 1767384 1767863 . + 0 ID=cds-WP_046371779.1;Parent=gene-LU631_RS09255;Dbxref=Genbank:WP_046371779.1;Name=WP_046371779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729926.1;locus_tag=LU631_RS09255;product=DNA-packaging protein;protein_id=WP_046371779.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1768066 1769589 . + . ID=gene-LU631_RS09260;Name=LU631_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09260;old_locus_tag=LU631_09260 NZ_CP089940.1 Protein Homology CDS 1768066 1769589 . + 0 ID=cds-WP_046371780.1;Parent=gene-LU631_RS09260;Dbxref=Genbank:WP_046371780.1;Name=WP_046371780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000417856.1;locus_tag=LU631_RS09260;product=terminase large subunit;protein_id=WP_046371780.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1769589 1771617 . + . ID=gene-LU631_RS09265;Name=LU631_RS09265;end_range=1771617,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09265;old_locus_tag=LU631_09265;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1769589 1771617 . + 0 ID=cds-LU631_RS09265;Parent=gene-LU631_RS09265;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1771617,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813168.1;locus_tag=LU631_RS09265;partial=true;product=portal protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1771718 1772626 . + . ID=gene-LU631_RS09270;Name=LU631_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09270;old_locus_tag=LU631_09270 NZ_CP089940.1 Protein Homology CDS 1771718 1772626 . + 0 ID=cds-WP_016193239.1;Parent=gene-LU631_RS09270;Dbxref=Genbank:WP_016193239.1;Name=WP_016193239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000438544.1;locus_tag=LU631_RS09270;product=scaffolding protein;protein_id=WP_016193239.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1772638 1773933 . + . ID=gene-LU631_RS09275;Name=LU631_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09275;old_locus_tag=LU631_09275 NZ_CP089940.1 Protein Homology CDS 1772638 1773933 . + 0 ID=cds-WP_046371781.1;Parent=gene-LU631_RS09275;Dbxref=Genbank:WP_046371781.1;Name=WP_046371781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193240.1;locus_tag=LU631_RS09275;product=coat protein;protein_id=WP_046371781.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1773975 1774247 . + . ID=gene-LU631_RS09280;Name=LU631_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09280;old_locus_tag=LU631_09280 NZ_CP089940.1 Protein Homology CDS 1773975 1774247 . + 0 ID=cds-WP_046371782.1;Parent=gene-LU631_RS09280;Dbxref=Genbank:WP_046371782.1;Name=WP_046371782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835894.1;locus_tag=LU631_RS09280;product=hypothetical protein;protein_id=WP_046371782.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1774231 1774716 . + . ID=gene-LU631_RS09285;Name=LU631_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09285;old_locus_tag=LU631_09285 NZ_CP089940.1 Protein Homology CDS 1774231 1774716 . + 0 ID=cds-WP_046371783.1;Parent=gene-LU631_RS09285;Dbxref=Genbank:WP_046371783.1;Name=WP_046371783.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023080.2;locus_tag=LU631_RS09285;product=hypothetical protein;protein_id=WP_046371783.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1774688 1775191 . + . ID=gene-LU631_RS09290;Name=LU631_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09290;old_locus_tag=LU631_09290 NZ_CP089940.1 Protein Homology CDS 1774688 1775191 . + 0 ID=cds-WP_233482007.1;Parent=gene-LU631_RS09290;Dbxref=Genbank:WP_233482007.1;Name=WP_233482007.1;Ontology_term=GO:0019073;gbkey=CDS;go_process=viral DNA genome packaging|0019073||IEA;inference=COORDINATES: protein motif:HMM:NF022584.2;locus_tag=LU631_RS09290;product=packaged DNA stabilization protein;protein_id=WP_233482007.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1775314 1776465 . + . ID=gene-LU631_RS09295;Name=LU631_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09295;old_locus_tag=LU631_09295 NZ_CP089940.1 Protein Homology CDS 1775314 1776465 . + 0 ID=cds-WP_233482008.1;Parent=gene-LU631_RS09295;Dbxref=Genbank:WP_233482008.1;Name=WP_233482008.1;Ontology_term=GO:0019073;gbkey=CDS;go_process=viral DNA genome packaging|0019073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813163.1;locus_tag=LU631_RS09295;product=packaged DNA stabilization protein;protein_id=WP_233482008.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1776458 1776949 . + . ID=gene-LU631_RS09300;Name=LU631_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09300;old_locus_tag=LU631_09300 NZ_CP089940.1 Protein Homology CDS 1776458 1776949 . + 0 ID=cds-WP_046371784.1;Parent=gene-LU631_RS09300;Dbxref=Genbank:WP_046371784.1;Name=WP_046371784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749455.1;locus_tag=LU631_RS09300;product=hypothetical protein;protein_id=WP_046371784.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1776952 1777341 . + . ID=gene-LU631_RS09305;Name=LU631_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09305;old_locus_tag=LU631_09305 NZ_CP089940.1 GeneMarkS-2+ CDS 1776952 1777341 . + 0 ID=cds-WP_040465691.1;Parent=gene-LU631_RS09305;Dbxref=Genbank:WP_040465691.1;Name=WP_040465691.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09305;product=hypothetical protein;protein_id=WP_040465691.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1777325 1777891 . + . ID=gene-LU631_RS09310;Name=LU631_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09310;old_locus_tag=LU631_09310 NZ_CP089940.1 Protein Homology CDS 1777325 1777891 . + 0 ID=cds-WP_016191788.1;Parent=gene-LU631_RS09310;Dbxref=Genbank:WP_016191788.1;Name=WP_016191788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323012.1;locus_tag=LU631_RS09310;product=hypothetical protein;protein_id=WP_016191788.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1777903 1779093 . + . ID=gene-LU631_RS09315;Name=LU631_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09315;old_locus_tag=LU631_09315 NZ_CP089940.1 Protein Homology CDS 1777903 1779093 . + 0 ID=cds-WP_082103727.1;Parent=gene-LU631_RS09315;Dbxref=Genbank:WP_082103727.1;Name=WP_082103727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323011.1;locus_tag=LU631_RS09315;product=phage DNA ejection protein;protein_id=WP_082103727.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1779093 1781282 . + . ID=gene-LU631_RS09320;Name=LU631_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09320;old_locus_tag=LU631_09320 NZ_CP089940.1 GeneMarkS-2+ CDS 1779093 1781282 . + 0 ID=cds-WP_016191790.1;Parent=gene-LU631_RS09320;Dbxref=Genbank:WP_016191790.1;Name=WP_016191790.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09320;product=hypothetical protein;protein_id=WP_016191790.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1781843 1783114 . + . ID=gene-LU631_RS09325;Name=LU631_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09325;old_locus_tag=LU631_09325 NZ_CP089940.1 Protein Homology CDS 1781843 1783114 . + 0 ID=cds-WP_052734686.1;Parent=gene-LU631_RS09325;Dbxref=Genbank:WP_052734686.1;Name=WP_052734686.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020577.2;locus_tag=LU631_RS09325;product=phage tailspike protein;protein_id=WP_052734686.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1783144 1783470 . - . ID=gene-LU631_RS09330;Name=LU631_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09330;old_locus_tag=LU631_09330 NZ_CP089940.1 Protein Homology CDS 1783144 1783470 . - 0 ID=cds-WP_016191793.1-2;Parent=gene-LU631_RS09330;Dbxref=Genbank:WP_016191793.1;Name=WP_016191793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007763609.1;locus_tag=LU631_RS09330;product=DUF1493 family protein;protein_id=WP_016191793.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1783464 1783910 . - . ID=gene-LU631_RS09335;Name=LU631_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09335;old_locus_tag=LU631_09335 NZ_CP089940.1 Protein Homology CDS 1783464 1783910 . - 0 ID=cds-WP_016191794.1;Parent=gene-LU631_RS09335;Dbxref=Genbank:WP_016191794.1;Name=WP_016191794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078279.1;locus_tag=LU631_RS09335;product=hypothetical protein;protein_id=WP_016191794.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1784666 1785247 . - . ID=gene-LU631_RS09340;Name=LU631_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09340;old_locus_tag=LU631_09340 NZ_CP089940.1 GeneMarkS-2+ CDS 1784666 1785247 . - 0 ID=cds-WP_016191795.1;Parent=gene-LU631_RS09340;Dbxref=Genbank:WP_016191795.1;Name=WP_016191795.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09340;product=hypothetical protein;protein_id=WP_016191795.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1785334 1786557 . - . ID=gene-LU631_RS09345;Name=LU631_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09345;old_locus_tag=LU631_09345 NZ_CP089940.1 Protein Homology CDS 1785334 1786557 . - 0 ID=cds-WP_046371785.1;Parent=gene-LU631_RS09345;Dbxref=Genbank:WP_046371785.1;Name=WP_046371785.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU631_RS09345;product=IS91 family transposase;protein_id=WP_046371785.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1786646 1786948 . - . ID=gene-LU631_RS09350;Name=LU631_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09350;old_locus_tag=LU631_09350 NZ_CP089940.1 GeneMarkS-2+ CDS 1786646 1786948 . - 0 ID=cds-WP_016191797.1;Parent=gene-LU631_RS09350;Dbxref=Genbank:WP_016191797.1;Name=WP_016191797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09350;product=hypothetical protein;protein_id=WP_016191797.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1787075 1787329 . - . ID=gene-LU631_RS09355;Name=LU631_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09355;old_locus_tag=LU631_09355 NZ_CP089940.1 Protein Homology CDS 1787075 1787329 . - 0 ID=cds-WP_016191798.1;Parent=gene-LU631_RS09355;Dbxref=Genbank:WP_016191798.1;Name=WP_016191798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000497451.1;locus_tag=LU631_RS09355;product=DinI-like family protein;protein_id=WP_016191798.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1787578 1787958 . - . ID=gene-LU631_RS09360;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=LU631_RS09360;old_locus_tag=LU631_09360 NZ_CP089940.1 cmsearch tmRNA 1787578 1787958 . - . ID=rna-LU631_RS09360;Parent=gene-LU631_RS09360;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS09360;product=transfer-messenger RNA NZ_CP089940.1 cmsearch exon 1787578 1787958 . - . ID=exon-LU631_RS09360-1;Parent=rna-LU631_RS09360;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS09360;product=transfer-messenger RNA NZ_CP089940.1 RefSeq gene 1788008 1788490 . - . ID=gene-LU631_RS09365;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=LU631_RS09365;old_locus_tag=LU631_09365 NZ_CP089940.1 Protein Homology CDS 1788008 1788490 . - 0 ID=cds-WP_016191799.1;Parent=gene-LU631_RS09365;Dbxref=Genbank:WP_016191799.1;Name=WP_016191799.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147562.1;locus_tag=LU631_RS09365;product=SsrA-binding protein SmpB;protein_id=WP_016191799.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1788648 1789082 . + . ID=gene-LU631_RS09370;Name=LU631_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09370;old_locus_tag=LU631_09370 NZ_CP089940.1 Protein Homology CDS 1788648 1789082 . + 0 ID=cds-WP_016191800.1;Parent=gene-LU631_RS09370;Dbxref=Genbank:WP_016191800.1;Name=WP_016191800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667337.1;locus_tag=LU631_RS09370;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_016191800.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1789075 1789362 . + . ID=gene-LU631_RS09375;Name=LU631_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09375;old_locus_tag=LU631_09375 NZ_CP089940.1 Protein Homology CDS 1789075 1789362 . + 0 ID=cds-WP_016191801.1;Parent=gene-LU631_RS09375;Dbxref=Genbank:WP_016191801.1;Name=WP_016191801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014541967.1;locus_tag=LU631_RS09375;product=RnfH family protein;protein_id=WP_016191801.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1789506 1789946 . + . ID=gene-LU631_RS09380;Name=tnpA;end_range=1789946,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS09380;old_locus_tag=LU631_09380;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1789506 1789946 . + 0 ID=cds-LU631_RS09380;Parent=gene-LU631_RS09380;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1789946,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000525033.1;locus_tag=LU631_RS09380;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1790117 1791136 . + . ID=gene-LU631_RS09385;Name=LU631_RS09385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09385;old_locus_tag=LU631_09385;pseudo=true NZ_CP089940.1 Protein Homology CDS 1790117 1791136 . + 0 ID=cds-LU631_RS09385;Parent=gene-LU631_RS09385;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS09385;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1791209 1791556 . - . ID=gene-LU631_RS09390;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=LU631_RS09390;old_locus_tag=LU631_09390 NZ_CP089940.1 Protein Homology CDS 1791209 1791556 . - 0 ID=cds-WP_016191804.1;Parent=gene-LU631_RS09390;Dbxref=Genbank:WP_016191804.1;Name=WP_016191804.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203444.1;locus_tag=LU631_RS09390;product=outer membrane protein assembly factor BamE;protein_id=WP_016191804.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1791708 1793369 . - . ID=gene-LU631_RS09395;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=LU631_RS09395;old_locus_tag=LU631_09395 NZ_CP089940.1 Protein Homology CDS 1791708 1793369 . - 0 ID=cds-WP_016191805.1;Parent=gene-LU631_RS09395;Dbxref=Genbank:WP_016191805.1;Name=WP_016191805.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594347.1;locus_tag=LU631_RS09395;product=DNA repair protein RecN;protein_id=WP_016191805.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1793457 1794335 . - . ID=gene-LU631_RS09400;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=LU631_RS09400;old_locus_tag=LU631_09400 NZ_CP089940.1 Protein Homology CDS 1793457 1794335 . - 0 ID=cds-WP_016191806.1;Parent=gene-LU631_RS09400;Dbxref=Genbank:WP_016191806.1;Name=WP_016191806.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=LU631_RS09400;product=NAD(+) kinase;protein_id=WP_016191806.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1794461 1795042 . + . ID=gene-LU631_RS09405;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=LU631_RS09405;old_locus_tag=LU631_09405 NZ_CP089940.1 Protein Homology CDS 1794461 1795042 . + 0 ID=cds-WP_016191807.1;Parent=gene-LU631_RS09405;Dbxref=Genbank:WP_016191807.1;Name=WP_016191807.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168136.1;locus_tag=LU631_RS09405;product=nucleotide exchange factor GrpE;protein_id=WP_016191807.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1795129 1795806 . - . ID=gene-LU631_RS09410;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=LU631_RS09410;old_locus_tag=LU631_09410 NZ_CP089940.1 Protein Homology CDS 1795129 1795806 . - 0 ID=cds-WP_016191808.1;Parent=gene-LU631_RS09410;Dbxref=Genbank:WP_016191808.1;Name=WP_016191808.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159210.1;locus_tag=LU631_RS09410;product=uracil-DNA glycosylase;protein_id=WP_016191808.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1796091 1796474 . + . ID=gene-LU631_RS09415;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=LU631_RS09415;old_locus_tag=LU631_09415 NZ_CP089940.1 Protein Homology CDS 1796091 1796474 . + 0 ID=cds-WP_016191809.1;Parent=gene-LU631_RS09415;Dbxref=Genbank:WP_016191809.1;Name=WP_016191809.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=LU631_RS09415;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_016191809.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1796653 1797813 . - . ID=gene-LU631_RS09420;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=LU631_RS09420;old_locus_tag=LU631_09420 NZ_CP089940.1 Protein Homology CDS 1796653 1797813 . - 0 ID=cds-WP_016191810.1;Parent=gene-LU631_RS09420;Dbxref=Genbank:WP_016191810.1;Name=WP_016191810.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203479.1;locus_tag=LU631_RS09420;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_016191810.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1798396 1798737 . - . ID=gene-LU631_RS09425;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=LU631_RS09425;old_locus_tag=LU631_09425 NZ_CP089940.1 Protein Homology CDS 1798396 1798737 . - 0 ID=cds-WP_016191811.1;Parent=gene-LU631_RS09425;Dbxref=Genbank:WP_016191811.1;Name=WP_016191811.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849030.1;locus_tag=LU631_RS09425;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_016191811.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1799059 1799790 . - . ID=gene-LU631_RS09430;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=LU631_RS09430;old_locus_tag=LU631_09430 NZ_CP089940.1 Protein Homology CDS 1799059 1799790 . - 0 ID=cds-WP_016191812.1;Parent=gene-LU631_RS09430;Dbxref=Genbank:WP_016191812.1;Name=WP_016191812.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543493.1;locus_tag=LU631_RS09430;product=outer membrane protein assembly factor BamD;protein_id=WP_016191812.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1799922 1800899 . + . ID=gene-LU631_RS09435;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=LU631_RS09435;old_locus_tag=LU631_09435 NZ_CP089940.1 Protein Homology CDS 1799922 1800899 . + 0 ID=cds-WP_016191813.1;Parent=gene-LU631_RS09435;Dbxref=Genbank:WP_016191813.1;Name=WP_016191813.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016603421.1;locus_tag=LU631_RS09435;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_016191813.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1800899 1801627 . + . ID=gene-LU631_RS09440;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=LU631_RS09440;old_locus_tag=LU631_09440 NZ_CP089940.1 Protein Homology CDS 1800899 1801627 . + 0 ID=cds-WP_040465693.1;Parent=gene-LU631_RS09440;Dbxref=Genbank:WP_040465693.1;Name=WP_040465693.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669015.1;locus_tag=LU631_RS09440;product=purine nucleoside phosphorylase YfiH;protein_id=WP_040465693.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1801741 1804326 . + . ID=gene-LU631_RS09445;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=LU631_RS09445;old_locus_tag=LU631_09445 NZ_CP089940.1 Protein Homology CDS 1801741 1804326 . + 0 ID=cds-WP_198292534.1;Parent=gene-LU631_RS09445;Dbxref=Genbank:WP_198292534.1;Name=WP_198292534.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817507.1;locus_tag=LU631_RS09445;product=ATP-dependent chaperone ClpB;protein_id=WP_198292534.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1804562 1805065 . - . ID=gene-LU631_RS09450;Name=LU631_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09450;old_locus_tag=LU631_09450 NZ_CP089940.1 Protein Homology CDS 1804562 1805065 . - 0 ID=cds-WP_046371786.1;Parent=gene-LU631_RS09450;Dbxref=Genbank:WP_046371786.1;Name=WP_046371786.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU631_RS09450;product=IS1 family transposase;protein_id=WP_046371786.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1805529 1806884 . - . ID=gene-LU631_RS09460;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=LU631_RS09460;old_locus_tag=LU631_09460 NZ_CP089940.1 Protein Homology CDS 1805529 1806884 . - 0 ID=cds-WP_040465694.1;Parent=gene-LU631_RS09460;Dbxref=Genbank:WP_040465694.1;Name=WP_040465694.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120692.1;locus_tag=LU631_RS09460;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_040465694.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1806984 1809641 . - . ID=gene-LU631_RS09465;Name=LU631_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09465;old_locus_tag=LU631_09465 NZ_CP089940.1 Protein Homology CDS 1806984 1809641 . - 0 ID=cds-WP_016191817.1;Parent=gene-LU631_RS09465;Dbxref=Genbank:WP_016191817.1;Name=WP_016191817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000082639.1;locus_tag=LU631_RS09465;product=bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase;protein_id=WP_016191817.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1809875 1810378 . - . ID=gene-LU631_RS09470;Name=LU631_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09470;old_locus_tag=LU631_09470 NZ_CP089940.1 Protein Homology CDS 1809875 1810378 . - 0 ID=cds-WP_046371787.1;Parent=gene-LU631_RS09470;Dbxref=Genbank:WP_046371787.1;Name=WP_046371787.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU631_RS09470;product=IS1 family transposase;protein_id=WP_046371787.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1811325 1812430 . - . ID=gene-LU631_RS09480;Name=LU631_RS09480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09480;old_locus_tag=LU631_09480;pseudo=true NZ_CP089940.1 Protein Homology CDS 1811325 1812430 . - 0 ID=cds-LU631_RS09480;Parent=gene-LU631_RS09480;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558175.1;locus_tag=LU631_RS09480;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1812364 1812612 . - . ID=gene-LU631_RS09485;Name=LU631_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09485;old_locus_tag=LU631_09485 NZ_CP089940.1 Protein Homology CDS 1812364 1812612 . - 0 ID=cds-WP_071598930.1;Parent=gene-LU631_RS09485;Dbxref=Genbank:WP_071598930.1;Name=WP_071598930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707455.1;locus_tag=LU631_RS09485;product=hypothetical protein;protein_id=WP_071598930.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1812850 1813551 . + . ID=gene-LU631_RS09490;Name=LU631_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09490;old_locus_tag=LU631_09490 NZ_CP089940.1 Protein Homology CDS 1812850 1813551 . + 0 ID=cds-WP_016191819.1;Parent=gene-LU631_RS09490;Dbxref=Genbank:WP_016191819.1;Name=WP_016191819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015670639.1;locus_tag=LU631_RS09490;product=hypothetical protein;protein_id=WP_016191819.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1813544 1813966 . + . ID=gene-LU631_RS09495;Name=LU631_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09495;old_locus_tag=LU631_09495 NZ_CP089940.1 Protein Homology CDS 1813544 1813966 . + 0 ID=cds-WP_016191820.1;Parent=gene-LU631_RS09495;Dbxref=Genbank:WP_016191820.1;Name=WP_016191820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017798969.1;locus_tag=LU631_RS09495;product=hypothetical protein;protein_id=WP_016191820.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1814199 1814351 . - . ID=gene-LU631_RS09500;Name=LU631_RS09500;end_range=1814351,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09500;old_locus_tag=LU631_09500;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1814199 1814351 . - 0 ID=cds-LU631_RS09500;Parent=gene-LU631_RS09500;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1814351,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU631_RS09500;partial=true;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1814452 1815492 . + . ID=gene-LU631_RS09505;Name=LU631_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09505;old_locus_tag=LU631_09505 NZ_CP089940.1 Protein Homology CDS 1814452 1815492 . + 0 ID=cds-WP_046371791.1-8;Parent=gene-LU631_RS09505;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS09505;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1815554 1816512 . - . ID=gene-LU631_RS09510;Name=LU631_RS09510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09510;old_locus_tag=LU631_09510;partial=true;pseudo=true;start_range=.,1815554 NZ_CP089940.1 Protein Homology CDS 1815554 1816512 . - 0 ID=cds-LU631_RS09510;Parent=gene-LU631_RS09510;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU631_RS09510;partial=true;product=IS91 family transposase;pseudo=true;start_range=.,1815554;transl_table=11 NZ_CP089940.1 RefSeq gene 1816446 1816694 . - . ID=gene-LU631_RS09515;Name=LU631_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09515;old_locus_tag=LU631_09515 NZ_CP089940.1 Protein Homology CDS 1816446 1816694 . - 0 ID=cds-WP_071598930.1-2;Parent=gene-LU631_RS09515;Dbxref=Genbank:WP_071598930.1;Name=WP_071598930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707455.1;locus_tag=LU631_RS09515;product=hypothetical protein;protein_id=WP_071598930.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1816826 1817027 . - . ID=gene-LU631_RS09520;Name=LU631_RS09520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09520;old_locus_tag=LU631_09520;partial=true;pseudo=true;start_range=.,1816826 NZ_CP089940.1 Protein Homology CDS 1816826 1817027 . - 0 ID=cds-LU631_RS09520;Parent=gene-LU631_RS09520;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001300438.1;locus_tag=LU631_RS09520;partial=true;product=DTW domain-containing protein;pseudo=true;start_range=.,1816826;transl_table=11 NZ_CP089940.1 RefSeq gene 1817109 1817528 . - . ID=gene-LU631_RS09525;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=LU631_RS09525;old_locus_tag=LU631_09525 NZ_CP089940.1 Protein Homology CDS 1817109 1817528 . - 0 ID=cds-WP_016191827.1;Parent=gene-LU631_RS09525;Dbxref=Genbank:WP_016191827.1;Name=WP_016191827.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358802.1;locus_tag=LU631_RS09525;product=thioredoxin TrxC;protein_id=WP_016191827.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1817772 1818803 . + . ID=gene-LU631_RS09530;Name=LU631_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09530;old_locus_tag=LU631_09530 NZ_CP089940.1 Protein Homology CDS 1817772 1818803 . + 0 ID=cds-WP_016191828.1;Parent=gene-LU631_RS09530;Dbxref=Genbank:WP_016191828.1;Name=WP_016191828.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004162911.1;locus_tag=LU631_RS09530;product=tRNA/rRNA methyltransferase;protein_id=WP_016191828.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1818968 1819423 . + . ID=gene-LU631_RS09535;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS09535;old_locus_tag=LU631_09535;pseudo=true NZ_CP089940.1 Protein Homology CDS 1818968 1819423 . + 0 ID=cds-LU631_RS09535;Parent=gene-LU631_RS09535;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=LU631_RS09535;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1819560 1820694 . + . ID=gene-LU631_RS09540;Name=LU631_RS09540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09540;old_locus_tag=LU631_09540;pseudo=true NZ_CP089940.1 Protein Homology CDS 1819560 1820694 . + 0 ID=cds-LU631_RS09540;Parent=gene-LU631_RS09540;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS09540;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1820847 1821866 . - . ID=gene-LU631_RS09545;Name=LU631_RS09545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09545;old_locus_tag=LU631_09545;pseudo=true NZ_CP089940.1 Protein Homology CDS 1820847 1821866 . - 0 ID=cds-LU631_RS09545;Parent=gene-LU631_RS09545;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS09545;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1821971 1822165 . - . ID=gene-LU631_RS09550;Name=LU631_RS09550;end_range=1822165,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09550;old_locus_tag=LU631_09550;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1821971 1822165 . - 0 ID=cds-LU631_RS09550;Parent=gene-LU631_RS09550;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1822165,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019845218.1;locus_tag=LU631_RS09550;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1822163 1822860 . - . ID=gene-LU631_RS09555;Name=LU631_RS09555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09555;old_locus_tag=LU631_09555;partial=true;pseudo=true;start_range=.,1822163 NZ_CP089940.1 Protein Homology CDS 1822163 1822860 . - 0 ID=cds-LU631_RS09555;Parent=gene-LU631_RS09555;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008926765.1;locus_tag=LU631_RS09555;partial=true;product=biotin/lipoyl-binding protein;pseudo=true;start_range=.,1822163;transl_table=11 NZ_CP089940.1 RefSeq gene 1823003 1823533 . - . ID=gene-LU631_RS09560;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=LU631_RS09560;old_locus_tag=LU631_09560 NZ_CP089940.1 Protein Homology CDS 1823003 1823533 . - 0 ID=cds-WP_016191835.1;Parent=gene-LU631_RS09560;Dbxref=Genbank:WP_016191835.1;Name=WP_016191835.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228387.1;locus_tag=LU631_RS09560;product=transcriptional repressor MprA;protein_id=WP_016191835.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1824357 1825352 . - . ID=gene-LU631_RS09565;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=LU631_RS09565;old_locus_tag=LU631_09565 NZ_CP089940.1 Protein Homology CDS 1824357 1825352 . - 0 ID=cds-WP_016191836.1;Parent=gene-LU631_RS09565;Dbxref=Genbank:WP_016191836.1;Name=WP_016191836.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226500.1;locus_tag=LU631_RS09565;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_016191836.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1825422 1826585 . - . ID=gene-LU631_RS09570;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=LU631_RS09570;old_locus_tag=LU631_09570 NZ_CP089940.1 Protein Homology CDS 1825422 1826585 . - 0 ID=cds-WP_016191837.1;Parent=gene-LU631_RS09570;Dbxref=Genbank:WP_016191837.1;Name=WP_016191837.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440682.1;locus_tag=LU631_RS09570;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_016191837.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1826578 1827777 . - . ID=gene-LU631_RS09575;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=LU631_RS09575;old_locus_tag=LU631_09575 NZ_CP089940.1 Protein Homology CDS 1826578 1827777 . - 0 ID=cds-WP_016191838.1;Parent=gene-LU631_RS09575;Dbxref=Genbank:WP_016191838.1;Name=WP_016191838.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106308.1;locus_tag=LU631_RS09575;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_016191838.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1828155 1829114 . - . ID=gene-LU631_RS09580;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=LU631_RS09580;old_locus_tag=LU631_09580 NZ_CP089940.1 Protein Homology CDS 1828155 1829114 . - 0 ID=cds-WP_016191839.1;Parent=gene-LU631_RS09580;Dbxref=Genbank:WP_016191839.1;Name=WP_016191839.1;Ontology_term=GO:0009265,GO:0004748,GO:0030145,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,manganese ion binding|0030145||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382773.1;locus_tag=LU631_RS09580;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_016191839.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1829159 1831240 . - . ID=gene-LU631_RS09585;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=LU631_RS09585;old_locus_tag=LU631_09585 NZ_CP089940.1 Protein Homology CDS 1829159 1831240 . - 0 ID=cds-WP_016191840.1;Parent=gene-LU631_RS09585;Dbxref=Genbank:WP_016191840.1;Name=WP_016191840.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708489.2;locus_tag=LU631_RS09585;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_016191840.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1831270 1831686 . - . ID=gene-LU631_RS09590;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=LU631_RS09590;old_locus_tag=LU631_09590 NZ_CP089940.1 Protein Homology CDS 1831270 1831686 . - 0 ID=cds-WP_016191841.1;Parent=gene-LU631_RS09590;Dbxref=Genbank:WP_016191841.1;Name=WP_016191841.1;Ontology_term=GO:0009263;gbkey=CDS;gene=nrdI;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170575.1;locus_tag=LU631_RS09590;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_016191841.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1831692 1831934 . - . ID=gene-LU631_RS09595;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=LU631_RS09595;old_locus_tag=LU631_09595 NZ_CP089940.1 Protein Homology CDS 1831692 1831934 . - 0 ID=cds-WP_016191842.1;Parent=gene-LU631_RS09595;Dbxref=Genbank:WP_016191842.1;Name=WP_016191842.1;Ontology_term=GO:0097573;gbkey=CDS;gene=nrdH;go_function=glutathione oxidoreductase activity|0097573||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170573.1;locus_tag=LU631_RS09595;product=glutaredoxin-like protein NrdH;protein_id=WP_016191842.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1832187 1832510 . - . ID=gene-LU631_RS09600;Name=LU631_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09600;old_locus_tag=LU631_09600 NZ_CP089940.1 Protein Homology CDS 1832187 1832510 . - 0 ID=cds-WP_016191843.1;Parent=gene-LU631_RS09600;Dbxref=Genbank:WP_016191843.1;Name=WP_016191843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203455.1;locus_tag=LU631_RS09600;product=DUF883 family protein;protein_id=WP_016191843.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1832672 1833007 . + . ID=gene-LU631_RS09605;Name=LU631_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09605;old_locus_tag=LU631_09605 NZ_CP089940.1 Protein Homology CDS 1832672 1833007 . + 0 ID=cds-WP_016191844.1;Parent=gene-LU631_RS09605;Dbxref=Genbank:WP_016191844.1;Name=WP_016191844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803095.1;locus_tag=LU631_RS09605;product=DUF2002 family protein;protein_id=WP_016191844.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1833164 1834021 . + . ID=gene-LU631_RS09610;Name=LU631_RS09610;end_range=1834021,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09610;old_locus_tag=LU631_09610;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1833164 1834021 . + 0 ID=cds-LU631_RS09610;Parent=gene-LU631_RS09610;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=1834021,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203453.1;locus_tag=LU631_RS09610;partial=true;product=amino acid permease;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1834105 1835427 . + . ID=gene-LU631_RS09615;Name=LU631_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09615;old_locus_tag=LU631_09615 NZ_CP089940.1 Protein Homology CDS 1834105 1835427 . + 0 ID=cds-WP_046371795.1;Parent=gene-LU631_RS09615;Dbxref=Genbank:WP_046371795.1;Name=WP_046371795.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS09615;product=IS4 family transposase;protein_id=WP_046371795.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1835436 1835978 . + . ID=gene-LU631_RS09620;Name=LU631_RS09620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09620;old_locus_tag=LU631_09620;partial=true;pseudo=true;start_range=.,1835436 NZ_CP089940.1 Protein Homology CDS 1835436 1835978 . + 0 ID=cds-LU631_RS09620;Parent=gene-LU631_RS09620;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007886424.1;locus_tag=LU631_RS09620;partial=true;product=amino acid permease;pseudo=true;start_range=.,1835436;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1835986 1836906 . + . ID=gene-LU631_RS09625;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=pseudogene;locus_tag=LU631_RS09625;old_locus_tag=LU631_09625;pseudo=true NZ_CP089940.1 Protein Homology CDS 1835986 1836906 . + 0 ID=cds-LU631_RS09625;Parent=gene-LU631_RS09625;Note=frameshifted;Ontology_term=GO:0009086,GO:0047150;gbkey=CDS;gene=mmuM;go_function=betaine-homocysteine S-methyltransferase activity|0047150||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203452.1;locus_tag=LU631_RS09625;product=homocysteine S-methyltransferase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1837014 1837433 . + . ID=gene-LU631_RS09630;Name=LU631_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09630;old_locus_tag=LU631_09630 NZ_CP089940.1 Protein Homology CDS 1837014 1837433 . + 0 ID=cds-WP_016191847.1;Parent=gene-LU631_RS09630;Dbxref=Genbank:WP_016191847.1;Name=WP_016191847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010257757.1;locus_tag=LU631_RS09630;product=hypothetical protein;protein_id=WP_016191847.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1837563 1838426 . - . ID=gene-LU631_RS09635;Name=LU631_RS09635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09635;old_locus_tag=LU631_09635;pseudo=true NZ_CP089940.1 Protein Homology CDS 1837563 1838426 . - 0 ID=cds-LU631_RS09635;Parent=gene-LU631_RS09635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295328.1;locus_tag=LU631_RS09635;product=nucleoside-specific channel-forming protein Tsx;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1838559 1839388 . - . ID=gene-LU631_RS09640;Name=LU631_RS09640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09640;old_locus_tag=LU631_09640;pseudo=true NZ_CP089940.1 Protein Homology CDS 1838559 1839388 . - 0 ID=cds-LU631_RS09640;Parent=gene-LU631_RS09640;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917256.1;locus_tag=LU631_RS09640;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1839717 1840106 . - . ID=gene-LU631_RS09645;Name=LU631_RS09645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09645;old_locus_tag=LU631_09645;pseudo=true NZ_CP089940.1 Protein Homology CDS 1839717 1840106 . - 0 ID=cds-LU631_RS09645;Parent=gene-LU631_RS09645;Note=internal stop;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS09645;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1840633 1841202 . + . ID=gene-LU631_RS09650;Name=LU631_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09650;old_locus_tag=LU631_09650 NZ_CP089940.1 Protein Homology CDS 1840633 1841202 . + 0 ID=cds-WP_016191849.1;Parent=gene-LU631_RS09650;Dbxref=Genbank:WP_016191849.1;Name=WP_016191849.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS09650;product=transposase;protein_id=WP_016191849.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1841255 1841353 . - . ID=gene-LU631_RS09655;Name=LU631_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09655;old_locus_tag=LU631_09655 NZ_CP089940.1 Protein Homology CDS 1841255 1841353 . - 0 ID=cds-WP_152664136.1;Parent=gene-LU631_RS09655;Dbxref=Genbank:WP_152664136.1;Name=WP_152664136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008925225.1;locus_tag=LU631_RS09655;product=YoaK family small membrane protein;protein_id=WP_152664136.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1841599 1841786 . - . ID=gene-LU631_RS09660;Name=LU631_RS09660;end_range=1841786,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09660;old_locus_tag=LU631_09660;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1841599 1841786 . - 0 ID=cds-LU631_RS09660;Parent=gene-LU631_RS09660;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1841786,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343760.1;locus_tag=LU631_RS09660;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1841793 1841905 . + . ID=gene-LU631_RS09665;Name=LU631_RS09665;end_range=1841905,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09665;old_locus_tag=LU631_09665;partial=true;pseudo=true;start_range=.,1841793 NZ_CP089940.1 Protein Homology CDS 1841793 1841905 . + 0 ID=cds-LU631_RS09665;Parent=gene-LU631_RS09665;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1841905,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS09665;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,1841793;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1841906 1842449 . - . ID=gene-LU631_RS09670;Name=LU631_RS09670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09670;old_locus_tag=LU631_09670;partial=true;pseudo=true;start_range=.,1841906 NZ_CP089940.1 Protein Homology CDS 1841906 1842449 . - 0 ID=cds-LU631_RS09670;Parent=gene-LU631_RS09670;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001179707.1;locus_tag=LU631_RS09670;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,1841906;transl_table=11 NZ_CP089940.1 RefSeq gene 1842667 1843364 . - . ID=gene-LU631_RS09675;Name=LU631_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09675;old_locus_tag=LU631_09675 NZ_CP089940.1 Protein Homology CDS 1843115 1843364 . - 0 ID=cds-WP_233482009.1;Parent=gene-LU631_RS09675;Dbxref=Genbank:WP_233482009.1;Name=WP_233482009.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS09675;product=IS1 family transposase;protein_id=WP_233482009.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 1842667 1843115 . - 2 ID=cds-WP_233482009.1;Parent=gene-LU631_RS09675;Dbxref=Genbank:WP_233482009.1;Name=WP_233482009.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS09675;product=IS1 family transposase;protein_id=WP_233482009.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1843781 1844821 . + . ID=gene-LU631_RS09680;Name=LU631_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09680;old_locus_tag=LU631_09680 NZ_CP089940.1 Protein Homology CDS 1843781 1844821 . + 0 ID=cds-WP_046371797.1-2;Parent=gene-LU631_RS09680;Dbxref=Genbank:WP_046371797.1;Name=WP_046371797.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS09680;product=IS481 family transposase;protein_id=WP_046371797.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1844884 1845153 . - . ID=gene-LU631_RS09685;Name=LU631_RS09685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09685;old_locus_tag=LU631_09685;partial=true;pseudo=true;start_range=.,1844884 NZ_CP089940.1 Protein Homology CDS 1844884 1845153 . - 0 ID=cds-LU631_RS09685;Parent=gene-LU631_RS09685;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034701.1;locus_tag=LU631_RS09685;partial=true;product=3'-5' exoribonuclease;pseudo=true;start_range=.,1844884;transl_table=11 NZ_CP089940.1 RefSeq gene 1845173 1845361 . - . ID=gene-LU631_RS09690;Name=LU631_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09690;old_locus_tag=LU631_09690 NZ_CP089940.1 Protein Homology CDS 1845173 1845361 . - 0 ID=cds-WP_232426890.1;Parent=gene-LU631_RS09690;Dbxref=Genbank:WP_232426890.1;Name=WP_232426890.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024666.2;locus_tag=LU631_RS09690;product=DUF4060 family protein;protein_id=WP_232426890.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1845404 1845829 . - . ID=gene-LU631_RS09695;Name=LU631_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09695;old_locus_tag=LU631_09695 NZ_CP089940.1 GeneMarkS-2+ CDS 1845404 1845829 . - 0 ID=cds-WP_016191854.1;Parent=gene-LU631_RS09695;Dbxref=Genbank:WP_016191854.1;Name=WP_016191854.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09695;product=hypothetical protein;protein_id=WP_016191854.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1845826 1846419 . - . ID=gene-LU631_RS09700;Name=LU631_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09700;old_locus_tag=LU631_09700 NZ_CP089940.1 Protein Homology CDS 1845826 1846419 . - 0 ID=cds-WP_040465699.1;Parent=gene-LU631_RS09700;Dbxref=Genbank:WP_040465699.1;Name=WP_040465699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024784.2;locus_tag=LU631_RS09700;product=HNH endonuclease signature motif containing protein;protein_id=WP_040465699.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1846401 1846628 . - . ID=gene-LU631_RS09705;Name=LU631_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09705;old_locus_tag=LU631_09705 NZ_CP089940.1 Protein Homology CDS 1846401 1846628 . - 0 ID=cds-WP_016191856.1;Parent=gene-LU631_RS09705;Dbxref=Genbank:WP_016191856.1;Name=WP_016191856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660853.1;locus_tag=LU631_RS09705;product=hypothetical protein;protein_id=WP_016191856.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1846625 1846873 . - . ID=gene-LU631_RS09710;Name=LU631_RS09710;end_range=1846873,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09710;old_locus_tag=LU631_09710;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1846625 1846873 . - 0 ID=cds-LU631_RS09710;Parent=gene-LU631_RS09710;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1846873,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000664373.1;locus_tag=LU631_RS09710;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1846942 1847187 . - . ID=gene-LU631_RS09715;Name=LU631_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09715;old_locus_tag=LU631_09715 NZ_CP089940.1 Protein Homology CDS 1846942 1847187 . - 0 ID=cds-WP_016191858.1;Parent=gene-LU631_RS09715;Dbxref=Genbank:WP_016191858.1;Name=WP_016191858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004956582.1;locus_tag=LU631_RS09715;product=hypothetical protein;protein_id=WP_016191858.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1847272 1847505 . - . ID=gene-LU631_RS09720;Name=LU631_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09720;old_locus_tag=LU631_09720 NZ_CP089940.1 Protein Homology CDS 1847272 1847505 . - 0 ID=cds-WP_016191859.1;Parent=gene-LU631_RS09720;Dbxref=Genbank:WP_016191859.1;Name=WP_016191859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009112585.1;locus_tag=LU631_RS09720;product=hypothetical protein;protein_id=WP_016191859.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1847502 1848292 . - . ID=gene-LU631_RS09725;Name=LU631_RS09725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09725;old_locus_tag=LU631_09725;pseudo=true NZ_CP089940.1 Protein Homology CDS 1847502 1848292 . - 0 ID=cds-LU631_RS09725;Parent=gene-LU631_RS09725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001139550.1;locus_tag=LU631_RS09725;product=DNA-binding protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1848353 1849473 . - . ID=gene-LU631_RS09730;Name=LU631_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09730;old_locus_tag=LU631_09730 NZ_CP089940.1 Protein Homology CDS 1849215 1849473 . - 0 ID=cds-WP_152664139.1;Parent=gene-LU631_RS09730;Dbxref=Genbank:WP_152664139.1;Name=WP_152664139.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS09730;product=IS3 family transposase;protein_id=WP_152664139.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 1848353 1849215 . - 2 ID=cds-WP_152664139.1;Parent=gene-LU631_RS09730;Dbxref=Genbank:WP_152664139.1;Name=WP_152664139.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS09730;product=IS3 family transposase;protein_id=WP_152664139.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1849574 1849966 . - . ID=gene-LU631_RS09735;Name=LU631_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09735;old_locus_tag=LU631_09735 NZ_CP089940.1 Protein Homology CDS 1849574 1849966 . - 0 ID=cds-WP_046371831.1;Parent=gene-LU631_RS09735;Dbxref=Genbank:WP_046371831.1;Name=WP_046371831.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021574.2;locus_tag=LU631_RS09735;product=DUF2303 family protein;protein_id=WP_046371831.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1850002 1850364 . - . ID=gene-LU631_RS09740;Name=LU631_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09740;old_locus_tag=LU631_09740 NZ_CP089940.1 Protein Homology CDS 1850002 1850364 . - 0 ID=cds-WP_046371800.1;Parent=gene-LU631_RS09740;Dbxref=Genbank:WP_046371800.1;Name=WP_046371800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006326678.1;locus_tag=LU631_RS09740;product=hypothetical protein;protein_id=WP_046371800.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1850468 1851165 . + . ID=gene-LU631_RS09745;Name=LU631_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09745;old_locus_tag=LU631_09745 NZ_CP089940.1 Protein Homology CDS 1850468 1850729 . + 0 ID=cds-WP_233482010.1;Parent=gene-LU631_RS09745;Dbxref=Genbank:WP_233482010.1;Name=WP_233482010.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS09745;product=IS1 family transposase;protein_id=WP_233482010.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 1850729 1851165 . + 2 ID=cds-WP_233482010.1;Parent=gene-LU631_RS09745;Dbxref=Genbank:WP_233482010.1;Name=WP_233482010.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS09745;product=IS1 family transposase;protein_id=WP_233482010.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1851228 1852154 . + . ID=gene-LU631_RS09750;Name=LU631_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09750;old_locus_tag=LU631_09750 NZ_CP089940.1 Protein Homology CDS 1851228 1852154 . + 0 ID=cds-WP_016191861.1;Parent=gene-LU631_RS09750;Dbxref=Genbank:WP_016191861.1;Name=WP_016191861.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013257.2;locus_tag=LU631_RS09750;product=glycosyltransferase family 9 protein;protein_id=WP_016191861.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1852192 1852602 . - . ID=gene-LU631_RS09755;Name=LU631_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09755;old_locus_tag=LU631_09755 NZ_CP089940.1 Protein Homology CDS 1852192 1852602 . - 0 ID=cds-WP_016191862.1;Parent=gene-LU631_RS09755;Dbxref=Genbank:WP_016191862.1;Name=WP_016191862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906751.1;locus_tag=LU631_RS09755;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_016191862.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1852628 1852942 . - . ID=gene-LU631_RS09760;Name=LU631_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09760;old_locus_tag=LU631_09760 NZ_CP089940.1 Protein Homology CDS 1852628 1852942 . - 0 ID=cds-WP_198292537.1;Parent=gene-LU631_RS09760;Dbxref=Genbank:WP_198292537.1;Name=WP_198292537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006709381.1;locus_tag=LU631_RS09760;product=hypothetical protein;protein_id=WP_198292537.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1853013 1854110 . - . ID=gene-LU631_RS09765;Name=LU631_RS09765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09765;old_locus_tag=LU631_09765;pseudo=true NZ_CP089940.1 Protein Homology CDS 1853013 1854110 . - 0 ID=cds-LU631_RS09765;Parent=gene-LU631_RS09765;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323000.1;locus_tag=LU631_RS09765;product=site-specific integrase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1854330 1854479 . - . ID=gene-LU631_RS09770;Name=LU631_RS09770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09770;old_locus_tag=LU631_09770;partial=true;pseudo=true;start_range=.,1854330 NZ_CP089940.1 Protein Homology CDS 1854330 1854479 . - 0 ID=cds-LU631_RS09770;Parent=gene-LU631_RS09770;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016365.2;locus_tag=LU631_RS09770;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1854330;transl_table=11 NZ_CP089940.1 RefSeq gene 1855014 1855973 . + . ID=gene-LU631_RS09775;Name=LU631_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09775;old_locus_tag=LU631_09775 NZ_CP089940.1 Protein Homology CDS 1855014 1855973 . + 0 ID=cds-WP_016191864.1;Parent=gene-LU631_RS09775;Dbxref=Genbank:WP_016191864.1;Name=WP_016191864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201219.1;locus_tag=LU631_RS09775;product=chemotaxis protein;protein_id=WP_016191864.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1856298 1856468 . - . ID=gene-LU631_RS09780;Name=LU631_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09780;old_locus_tag=LU631_09780 NZ_CP089940.1 GeneMarkS-2+ CDS 1856298 1856468 . - 0 ID=cds-WP_157275245.1;Parent=gene-LU631_RS09780;Dbxref=Genbank:WP_157275245.1;Name=WP_157275245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09780;product=hypothetical protein;protein_id=WP_157275245.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1856701 1857195 . + . ID=gene-LU631_RS09785;Name=LU631_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09785;old_locus_tag=LU631_09785 NZ_CP089940.1 Protein Homology CDS 1856701 1857195 . + 0 ID=cds-WP_040465700.1;Parent=gene-LU631_RS09785;Dbxref=Genbank:WP_040465700.1;Name=WP_040465700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799358.1;locus_tag=LU631_RS09785;product=DUF1198 family protein;protein_id=WP_040465700.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1857715 1858412 . + . ID=gene-LU631_RS09790;Name=LU631_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09790;old_locus_tag=LU631_09790 NZ_CP089940.1 Protein Homology CDS 1857715 1857964 . + 0 ID=cds-WP_233482011.1;Parent=gene-LU631_RS09790;Dbxref=Genbank:WP_233482011.1;Name=WP_233482011.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS09790;product=IS1 family transposase;protein_id=WP_233482011.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 1857964 1858412 . + 2 ID=cds-WP_233482011.1;Parent=gene-LU631_RS09790;Dbxref=Genbank:WP_233482011.1;Name=WP_233482011.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS09790;product=IS1 family transposase;protein_id=WP_233482011.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1858453 1858617 . + . ID=gene-LU631_RS09795;Name=LU631_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09795;old_locus_tag=LU631_09795 NZ_CP089940.1 GeneMarkS-2+ CDS 1858453 1858617 . + 0 ID=cds-WP_157275246.1;Parent=gene-LU631_RS09795;Dbxref=Genbank:WP_157275246.1;Name=WP_157275246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09795;product=hypothetical protein;protein_id=WP_157275246.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1858670 1859242 . + . ID=gene-LU631_RS09800;Name=LU631_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09800;old_locus_tag=LU631_09800 NZ_CP089940.1 Protein Homology CDS 1858670 1859242 . + 0 ID=cds-WP_082103734.1;Parent=gene-LU631_RS09800;Dbxref=Genbank:WP_082103734.1;Name=WP_082103734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001568898.1;locus_tag=LU631_RS09800;product=DUF3164 family protein;protein_id=WP_082103734.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1860281 1860502 . + . ID=gene-LU631_RS09805;Name=LU631_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09805;old_locus_tag=LU631_09805 NZ_CP089940.1 GeneMarkS-2+ CDS 1860281 1860502 . + 0 ID=cds-WP_016191869.1;Parent=gene-LU631_RS09805;Dbxref=Genbank:WP_016191869.1;Name=WP_016191869.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09805;product=hypothetical protein;protein_id=WP_016191869.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1860499 1860639 . + . ID=gene-LU631_RS09810;Name=LU631_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09810;old_locus_tag=LU631_09810 NZ_CP089940.1 GeneMarkS-2+ CDS 1860499 1860639 . + 0 ID=cds-WP_157275247.1;Parent=gene-LU631_RS09810;Dbxref=Genbank:WP_157275247.1;Name=WP_157275247.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09810;product=hypothetical protein;protein_id=WP_157275247.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1860901 1861143 . + . ID=gene-LU631_RS09815;Name=LU631_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09815;old_locus_tag=LU631_09815 NZ_CP089940.1 GeneMarkS-2+ CDS 1860901 1861143 . + 0 ID=cds-WP_016191870.1;Parent=gene-LU631_RS09815;Dbxref=Genbank:WP_016191870.1;Name=WP_016191870.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09815;product=hypothetical protein;protein_id=WP_016191870.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1861151 1861600 . + . ID=gene-LU631_RS09820;Name=LU631_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09820;old_locus_tag=LU631_09820 NZ_CP089940.1 Protein Homology CDS 1861151 1861600 . + 0 ID=cds-WP_016191871.1;Parent=gene-LU631_RS09820;Dbxref=Genbank:WP_016191871.1;Name=WP_016191871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003030376.1;locus_tag=LU631_RS09820;product=regulatory protein GemA;protein_id=WP_016191871.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1861578 1861925 . + . ID=gene-LU631_RS09825;Name=LU631_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09825;old_locus_tag=LU631_09825 NZ_CP089940.1 Protein Homology CDS 1861578 1861925 . + 0 ID=cds-WP_016191872.1;Parent=gene-LU631_RS09825;Dbxref=Genbank:WP_016191872.1;Name=WP_016191872.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020345.2;locus_tag=LU631_RS09825;product=hypothetical protein;protein_id=WP_016191872.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1861943 1862137 . + . ID=gene-LU631_RS09830;Name=LU631_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09830;old_locus_tag=LU631_09830 NZ_CP089940.1 GeneMarkS-2+ CDS 1861943 1862137 . + 0 ID=cds-WP_016191873.1;Parent=gene-LU631_RS09830;Dbxref=Genbank:WP_016191873.1;Name=WP_016191873.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09830;product=hypothetical protein;protein_id=WP_016191873.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1862199 1862366 . + . ID=gene-LU631_RS09835;Name=LU631_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09835;old_locus_tag=LU631_09835 NZ_CP089940.1 GeneMarkS-2+ CDS 1862199 1862366 . + 0 ID=cds-WP_157275248.1;Parent=gene-LU631_RS09835;Dbxref=Genbank:WP_157275248.1;Name=WP_157275248.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09835;product=hypothetical protein;protein_id=WP_157275248.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1862366 1862935 . + . ID=gene-LU631_RS09840;Name=LU631_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09840;old_locus_tag=LU631_09840 NZ_CP089940.1 GeneMarkS-2+ CDS 1862366 1862935 . + 0 ID=cds-WP_040465702.1;Parent=gene-LU631_RS09840;Dbxref=Genbank:WP_040465702.1;Name=WP_040465702.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09840;product=hypothetical protein;protein_id=WP_040465702.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1862874 1863155 . + . ID=gene-LU631_RS09845;Name=LU631_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09845;old_locus_tag=LU631_09845 NZ_CP089940.1 GeneMarkS-2+ CDS 1862874 1863155 . + 0 ID=cds-WP_152664140.1;Parent=gene-LU631_RS09845;Dbxref=Genbank:WP_152664140.1;Name=WP_152664140.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09845;product=hypothetical protein;protein_id=WP_152664140.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1863193 1863381 . + . ID=gene-LU631_RS09850;Name=LU631_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09850;old_locus_tag=LU631_09850 NZ_CP089940.1 GeneMarkS-2+ CDS 1863193 1863381 . + 0 ID=cds-WP_152664141.1;Parent=gene-LU631_RS09850;Dbxref=Genbank:WP_152664141.1;Name=WP_152664141.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09850;product=hypothetical protein;protein_id=WP_152664141.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1863498 1863653 . - . ID=gene-LU631_RS09855;Name=LU631_RS09855;end_range=1863653,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09855;old_locus_tag=LU631_09855;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1863498 1863653 . - 0 ID=cds-LU631_RS09855;Parent=gene-LU631_RS09855;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1863653,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762717.1;locus_tag=LU631_RS09855;partial=true;product=short-chain dehydrogenase/reductase SDR;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1863803 1864942 . - . ID=gene-LU631_RS09860;Name=LU631_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09860;old_locus_tag=LU631_09860 NZ_CP089940.1 Protein Homology CDS 1863803 1864942 . - 0 ID=cds-WP_016191876.1;Parent=gene-LU631_RS09860;Dbxref=Genbank:WP_016191876.1;Name=WP_016191876.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799297.1;locus_tag=LU631_RS09860;product=iron-containing alcohol dehydrogenase;protein_id=WP_016191876.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1865074 1865448 . - . ID=gene-LU631_RS09865;Name=LU631_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09865;old_locus_tag=LU631_09865 NZ_CP089940.1 GeneMarkS-2+ CDS 1865074 1865448 . - 0 ID=cds-WP_233478843.1;Parent=gene-LU631_RS09865;Dbxref=Genbank:WP_233478843.1;Name=WP_233478843.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09865;product=hypothetical protein;protein_id=WP_233478843.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1865681 1866889 . - . ID=gene-LU631_RS09870;Name=LU631_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09870;old_locus_tag=LU631_09870 NZ_CP089940.1 Protein Homology CDS 1865681 1866889 . - 0 ID=cds-WP_046371804.1;Parent=gene-LU631_RS09870;Dbxref=Genbank:WP_046371804.1;Name=WP_046371804.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS09870;product=IS256 family transposase;protein_id=WP_046371804.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1867928 1868092 . + . ID=gene-LU631_RS09875;Name=LU631_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09875;old_locus_tag=LU631_09875 NZ_CP089940.1 GeneMarkS-2+ CDS 1867928 1868092 . + 0 ID=cds-WP_233482012.1;Parent=gene-LU631_RS09875;Dbxref=Genbank:WP_233482012.1;Name=WP_233482012.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09875;product=hypothetical protein;protein_id=WP_233482012.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1868452 1869732 . + . ID=gene-LU631_RS09880;Name=LU631_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09880;old_locus_tag=LU631_09880 NZ_CP089940.1 Protein Homology CDS 1868452 1869732 . + 0 ID=cds-WP_016191878.1;Parent=gene-LU631_RS09880;Dbxref=Genbank:WP_016191878.1;Name=WP_016191878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001838494.1;locus_tag=LU631_RS09880;product=HlyD family secretion protein;protein_id=WP_016191878.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1869740 1871845 . + . ID=gene-LU631_RS09885;Name=LU631_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09885;old_locus_tag=LU631_09885 NZ_CP089940.1 Protein Homology CDS 1869740 1871845 . + 0 ID=cds-WP_040465721.1;Parent=gene-LU631_RS09885;Dbxref=Genbank:WP_040465721.1;Name=WP_040465721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006175477.1;locus_tag=LU631_RS09885;product=peptidase domain-containing ABC transporter;protein_id=WP_040465721.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1872761 1873912 . + . ID=gene-LU631_RS09890;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=LU631_RS09890;old_locus_tag=LU631_09890 NZ_CP089940.1 Protein Homology CDS 1872761 1873912 . + 0 ID=cds-WP_016191880.1;Parent=gene-LU631_RS09890;Dbxref=Genbank:WP_016191880.1;Name=WP_016191880.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201238.1;locus_tag=LU631_RS09890;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_016191880.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1873902 1874882 . + . ID=gene-LU631_RS09895;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=LU631_RS09895;old_locus_tag=LU631_09895 NZ_CP089940.1 Protein Homology CDS 1873902 1874882 . + 0 ID=cds-WP_016191881.1;Parent=gene-LU631_RS09895;Dbxref=Genbank:WP_016191881.1;Name=WP_016191881.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201239.1;locus_tag=LU631_RS09895;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_016191881.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1874882 1876864 . + . ID=gene-LU631_RS09900;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=LU631_RS09900;old_locus_tag=LU631_09900 NZ_CP089940.1 Protein Homology CDS 1874882 1876864 . + 0 ID=cds-WP_016191882.1;Parent=gene-LU631_RS09900;Dbxref=Genbank:WP_016191882.1;Name=WP_016191882.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014598157.1;locus_tag=LU631_RS09900;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_016191882.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1876861 1877754 . + . ID=gene-LU631_RS09905;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=LU631_RS09905;old_locus_tag=LU631_09905 NZ_CP089940.1 Protein Homology CDS 1876861 1877754 . + 0 ID=cds-WP_016191883.1;Parent=gene-LU631_RS09905;Dbxref=Genbank:WP_016191883.1;Name=WP_016191883.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201241.1;locus_tag=LU631_RS09905;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_016191883.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1877760 1879421 . + . ID=gene-LU631_RS09910;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=LU631_RS09910;old_locus_tag=LU631_09910 NZ_CP089940.1 Protein Homology CDS 1877760 1879421 . + 0 ID=cds-WP_016191884.1;Parent=gene-LU631_RS09910;Dbxref=Genbank:WP_016191884.1;Name=WP_016191884.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201242.1;locus_tag=LU631_RS09910;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_016191884.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1879418 1879750 . + . ID=gene-LU631_RS09915;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=LU631_RS09915;old_locus_tag=LU631_09915 NZ_CP089940.1 Protein Homology CDS 1879418 1879750 . + 0 ID=cds-WP_016191885.1;Parent=gene-LU631_RS09915;Dbxref=Genbank:WP_016191885.1;Name=WP_016191885.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008460715.1;locus_tag=LU631_RS09915;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_016191885.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1879750 1880139 . + . ID=gene-LU631_RS09920;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=LU631_RS09920;old_locus_tag=LU631_09920 NZ_CP089940.1 Protein Homology CDS 1879750 1880139 . + 0 ID=cds-WP_016191886.1;Parent=gene-LU631_RS09920;Dbxref=Genbank:WP_016191886.1;Name=WP_016191886.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172048.1;locus_tag=LU631_RS09920;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_016191886.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1880900 1881739 . + . ID=gene-LU631_RS09925;Name=LU631_RS09925;end_range=1881739,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09925;old_locus_tag=LU631_09925;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1880900 1881739 . + 0 ID=cds-LU631_RS09925;Parent=gene-LU631_RS09925;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1881739,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS09925;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1882126 1882911 . + . ID=gene-LU631_RS09930;Name=LU631_RS09930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09930;old_locus_tag=LU631_09930;partial=true;pseudo=true;start_range=.,1882126 NZ_CP089940.1 Protein Homology CDS 1882126 1882911 . + 0 ID=cds-LU631_RS09930;Parent=gene-LU631_RS09930;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=LU631_RS09930;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,1882126;transl_table=11 NZ_CP089940.1 RefSeq gene 1883341 1883583 . + . ID=gene-LU631_RS09935;Name=LU631_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09935;old_locus_tag=LU631_09935 NZ_CP089940.1 GeneMarkS-2+ CDS 1883341 1883583 . + 0 ID=cds-WP_152664144.1;Parent=gene-LU631_RS09935;Dbxref=Genbank:WP_152664144.1;Name=WP_152664144.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS09935;product=hypothetical protein;protein_id=WP_152664144.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1884574 1885149 . + . ID=gene-LU631_RS09940;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=LU631_RS09940;old_locus_tag=LU631_09940 NZ_CP089940.1 Protein Homology CDS 1884574 1885149 . + 0 ID=cds-WP_016191892.1;Parent=gene-LU631_RS09940;Dbxref=Genbank:WP_016191892.1;Name=WP_016191892.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169132.1;locus_tag=LU631_RS09940;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_016191892.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1885300 1885509 . + . ID=gene-LU631_RS09945;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=LU631_RS09945;old_locus_tag=LU631_09945 NZ_CP089940.1 Protein Homology CDS 1885300 1885509 . + 0 ID=cds-WP_004156612.1;Parent=gene-LU631_RS09945;Dbxref=Genbank:WP_004156612.1;Name=WP_004156612.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225795.1;locus_tag=LU631_RS09945;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_004156612.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1885889 1886317 . + . ID=gene-LU631_RS09950;Name=LU631_RS09950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09950;old_locus_tag=LU631_09950;pseudo=true NZ_CP089940.1 Protein Homology CDS 1885889 1886317 . + 0 ID=cds-LU631_RS09950;Parent=gene-LU631_RS09950;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201259.1;locus_tag=LU631_RS09950;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1886408 1886911 . - . ID=gene-LU631_RS09955;Name=LU631_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09955;old_locus_tag=LU631_09955 NZ_CP089940.1 Protein Homology CDS 1886408 1886911 . - 0 ID=cds-WP_072052780.1;Parent=gene-LU631_RS09955;Dbxref=Genbank:WP_072052780.1;Name=WP_072052780.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU631_RS09955;product=IS1 family transposase;protein_id=WP_072052780.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1887250 1888071 . + . ID=gene-LU631_RS09965;Name=LU631_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09965;old_locus_tag=LU631_09965 NZ_CP089940.1 Protein Homology CDS 1887250 1888071 . + 0 ID=cds-WP_016191895.1;Parent=gene-LU631_RS09965;Dbxref=Genbank:WP_016191895.1;Name=WP_016191895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015698171.1;locus_tag=LU631_RS09965;product=deaminated glutathione amidase;protein_id=WP_016191895.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1888416 1888622 . + . ID=gene-LU631_RS09970;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=LU631_RS09970;old_locus_tag=LU631_09970 NZ_CP089940.1 Protein Homology CDS 1888416 1888622 . + 0 ID=cds-WP_016191896.1;Parent=gene-LU631_RS09970;Dbxref=Genbank:WP_016191896.1;Name=WP_016191896.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805630.1;locus_tag=LU631_RS09970;product=twin-arginine translocase subunit TatE;protein_id=WP_016191896.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1888790 1888939 . + . ID=gene-LU631_RS09975;Name=LU631_RS09975;end_range=1888939,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS09975;old_locus_tag=LU631_09975;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1888790 1888939 . + 0 ID=cds-LU631_RS09975;Parent=gene-LU631_RS09975;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1888939,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011758714.1;locus_tag=LU631_RS09975;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1889007 1890227 . + . ID=gene-LU631_RS09980;Name=LU631_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS09980;old_locus_tag=LU631_09980 NZ_CP089940.1 Protein Homology CDS 1889007 1890227 . + 0 ID=cds-WP_046371806.1-7;Parent=gene-LU631_RS09980;Dbxref=Genbank:WP_046371806.1;Name=WP_046371806.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025244073.1;locus_tag=LU631_RS09980;product=ISL3 family transposase;protein_id=WP_046371806.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1890254 1890598 . + . ID=gene-LU631_RS09985;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS09985;old_locus_tag=LU631_09985;partial=true;pseudo=true;start_range=.,1890254 NZ_CP089940.1 Protein Homology CDS 1890254 1890598 . + 0 ID=cds-LU631_RS09985;Parent=gene-LU631_RS09985;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192470.1;locus_tag=LU631_RS09985;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,1890254;transl_table=11 NZ_CP089940.1 RefSeq gene 1890635 1891600 . - . ID=gene-LU631_RS09990;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=LU631_RS09990;old_locus_tag=LU631_09990 NZ_CP089940.1 Protein Homology CDS 1890635 1891600 . - 0 ID=cds-WP_016191898.1;Parent=gene-LU631_RS09990;Dbxref=Genbank:WP_016191898.1;Name=WP_016191898.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459625.1;locus_tag=LU631_RS09990;product=lipoyl synthase;protein_id=WP_016191898.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1891773 1892444 . - . ID=gene-LU631_RS09995;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=LU631_RS09995;old_locus_tag=LU631_09995 NZ_CP089940.1 Protein Homology CDS 1891773 1892444 . - 0 ID=cds-WP_040465705.1;Parent=gene-LU631_RS09995;Dbxref=Genbank:WP_040465705.1;Name=WP_040465705.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442073.1;locus_tag=LU631_RS09995;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_040465705.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1892526 1892789 . - . ID=gene-LU631_RS10000;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=LU631_RS10000;old_locus_tag=LU631_10000 NZ_CP089940.1 Protein Homology CDS 1892526 1892789 . - 0 ID=cds-WP_016191900.1;Parent=gene-LU631_RS10000;Dbxref=Genbank:WP_016191900.1;Name=WP_016191900.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=LU631_RS10000;product=DUF493 family protein YbeD;protein_id=WP_016191900.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1892915 1894126 . - . ID=gene-LU631_RS10005;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=LU631_RS10005;old_locus_tag=LU631_10005 NZ_CP089940.1 Protein Homology CDS 1892915 1894126 . - 0 ID=cds-WP_016191901.1;Parent=gene-LU631_RS10005;Dbxref=Genbank:WP_016191901.1;Name=WP_016191901.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191901.1;locus_tag=LU631_RS10005;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_016191901.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1894258 1895382 . - . ID=gene-LU631_RS10010;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=LU631_RS10010;old_locus_tag=LU631_10010 NZ_CP089940.1 Protein Homology CDS 1894258 1895382 . - 0 ID=cds-WP_016191902.1;Parent=gene-LU631_RS10010;Dbxref=Genbank:WP_016191902.1;Name=WP_016191902.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156619.1;locus_tag=LU631_RS10010;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_016191902.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1895394 1896506 . - . ID=gene-LU631_RS10015;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=LU631_RS10015;old_locus_tag=LU631_10015 NZ_CP089940.1 Protein Homology CDS 1895394 1896506 . - 0 ID=cds-WP_016191903.1;Parent=gene-LU631_RS10015;Dbxref=Genbank:WP_016191903.1;Name=WP_016191903.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156620.1;locus_tag=LU631_RS10015;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_016191903.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1896509 1898413 . - . ID=gene-LU631_RS10020;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=LU631_RS10020;old_locus_tag=LU631_10020 NZ_CP089940.1 Protein Homology CDS 1896509 1898413 . - 0 ID=cds-WP_016191904.1;Parent=gene-LU631_RS10020;Dbxref=Genbank:WP_016191904.1;Name=WP_016191904.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357097.1;locus_tag=LU631_RS10020;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_016191904.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1898446 1898916 . - . ID=gene-LU631_RS10025;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=LU631_RS10025;old_locus_tag=LU631_10025 NZ_CP089940.1 Protein Homology CDS 1898446 1898916 . - 0 ID=cds-WP_016191905.1;Parent=gene-LU631_RS10025;Dbxref=Genbank:WP_016191905.1;Name=WP_016191905.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=LU631_RS10025;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_016191905.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1898920 1899237 . - . ID=gene-LU631_RS10030;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=LU631_RS10030;old_locus_tag=LU631_10030 NZ_CP089940.1 Protein Homology CDS 1898920 1899237 . - 0 ID=cds-WP_016191906.1;Parent=gene-LU631_RS10030;Dbxref=Genbank:WP_016191906.1;Name=WP_016191906.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=LU631_RS10030;product=ribosome silencing factor;protein_id=WP_016191906.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1899943 1901078 . - . ID=gene-LU631_RS10035;Name=LU631_RS10035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10035;old_locus_tag=LU631_10035;partial=true;pseudo=true;start_range=.,1899943 NZ_CP089940.1 Protein Homology CDS 1899943 1901078 . - 0 ID=cds-LU631_RS10035;Parent=gene-LU631_RS10035;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015698571.1;locus_tag=LU631_RS10035;partial=true;product=chitinase;pseudo=true;start_range=.,1899943;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1901842 1902278 . + . ID=gene-LU631_RS10040;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS10040;old_locus_tag=LU631_10040;pseudo=true NZ_CP089940.1 Protein Homology CDS 1901842 1902278 . + 0 ID=cds-LU631_RS10040;Parent=gene-LU631_RS10040;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS10040;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1902652 1903317 . - . ID=gene-LU631_RS10045;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=LU631_RS10045;old_locus_tag=LU631_10045 NZ_CP089940.1 Protein Homology CDS 1902652 1903317 . - 0 ID=cds-WP_016191913.1;Parent=gene-LU631_RS10045;Dbxref=Genbank:WP_016191913.1;Name=WP_016191913.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891910.1;locus_tag=LU631_RS10045;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_016191913.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1903310 1904341 . - . ID=gene-LU631_RS10050;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=LU631_RS10050;old_locus_tag=LU631_10050 NZ_CP089940.1 Protein Homology CDS 1903310 1904341 . - 0 ID=cds-WP_016191914.1;Parent=gene-LU631_RS10050;Dbxref=Genbank:WP_016191914.1;Name=WP_016191914.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799264.1;locus_tag=LU631_RS10050;product=DNA polymerase III subunit delta;protein_id=WP_016191914.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1904338 1904934 . - . ID=gene-LU631_RS10055;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=LU631_RS10055;old_locus_tag=LU631_10055 NZ_CP089940.1 Protein Homology CDS 1904338 1904934 . - 0 ID=cds-WP_040465706.1;Parent=gene-LU631_RS10055;Dbxref=Genbank:WP_040465706.1;Name=WP_040465706.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156626.1;locus_tag=LU631_RS10055;product=LPS assembly lipoprotein LptE;protein_id=WP_040465706.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1904949 1907531 . - . ID=gene-LU631_RS10060;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=LU631_RS10060;old_locus_tag=LU631_10060 NZ_CP089940.1 Protein Homology CDS 1904949 1907531 . - 0 ID=cds-WP_016191916.1;Parent=gene-LU631_RS10060;Dbxref=Genbank:WP_016191916.1;Name=WP_016191916.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=LU631_RS10060;product=leucine--tRNA ligase;protein_id=WP_016191916.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1907744 1908226 . + . ID=gene-LU631_RS10065;Name=LU631_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10065;old_locus_tag=LU631_10065 NZ_CP089940.1 Protein Homology CDS 1907744 1908226 . + 0 ID=cds-WP_016191917.1;Parent=gene-LU631_RS10065;Dbxref=Genbank:WP_016191917.1;Name=WP_016191917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004164103.1;locus_tag=LU631_RS10065;product=zinc ribbon-containing protein;protein_id=WP_016191917.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1908323 1909855 . - . ID=gene-LU631_RS10070;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=LU631_RS10070;old_locus_tag=LU631_10070 NZ_CP089940.1 Protein Homology CDS 1908323 1909855 . - 0 ID=cds-WP_016191918.1;Parent=gene-LU631_RS10070;Dbxref=Genbank:WP_016191918.1;Name=WP_016191918.1;Ontology_term=GO:0006497,GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=protein lipidation|0006497||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169156.1;locus_tag=LU631_RS10070;product=apolipoprotein N-acyltransferase;protein_id=WP_016191918.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1909862 1910740 . - . ID=gene-LU631_RS10075;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=LU631_RS10075;old_locus_tag=LU631_10075 NZ_CP089940.1 Protein Homology CDS 1909862 1910740 . - 0 ID=cds-WP_016191919.1;Parent=gene-LU631_RS10075;Dbxref=Genbank:WP_016191919.1;Name=WP_016191919.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210342.1;locus_tag=LU631_RS10075;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_016191919.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1910828 1911301 . - . ID=gene-LU631_RS10080;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=LU631_RS10080;old_locus_tag=LU631_10080 NZ_CP089940.1 Protein Homology CDS 1910828 1911301 . - 0 ID=cds-WP_016191920.1;Parent=gene-LU631_RS10080;Dbxref=Genbank:WP_016191920.1;Name=WP_016191920.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015386892.1;locus_tag=LU631_RS10080;product=rRNA maturation RNase YbeY;protein_id=WP_016191920.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1911298 1912362 . - . ID=gene-LU631_RS10085;Name=LU631_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10085;old_locus_tag=LU631_10085 NZ_CP089940.1 Protein Homology CDS 1911298 1912362 . - 0 ID=cds-WP_016191921.1;Parent=gene-LU631_RS10085;Dbxref=Genbank:WP_016191921.1;Name=WP_016191921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799252.1;locus_tag=LU631_RS10085;product=PhoH family protein;protein_id=WP_016191921.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1912574 1913998 . - . ID=gene-LU631_RS10090;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=LU631_RS10090;old_locus_tag=LU631_10090 NZ_CP089940.1 Protein Homology CDS 1912574 1913998 . - 0 ID=cds-WP_016191922.1;Parent=gene-LU631_RS10090;Dbxref=Genbank:WP_016191922.1;Name=WP_016191922.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=LU631_RS10090;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_016191922.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1914183 1915373 . + . ID=gene-LU631_RS10095;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=LU631_RS10095;old_locus_tag=LU631_10095 NZ_CP089940.1 Protein Homology CDS 1914183 1915373 . + 0 ID=cds-WP_016191923.1;Parent=gene-LU631_RS10095;Dbxref=Genbank:WP_016191923.1;Name=WP_016191923.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201290.1;locus_tag=LU631_RS10095;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_016191923.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1915475 1915549 . - . ID=gene-LU631_RS10100;Name=LU631_RS10100;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS10100;old_locus_tag=LU631_10100 NZ_CP089940.1 tRNAscan-SE tRNA 1915475 1915549 . - . ID=rna-LU631_RS10100;Parent=gene-LU631_RS10100;anticodon=(pos:complement(1915515..1915517));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10100;product=tRNA-Gln NZ_CP089940.1 tRNAscan-SE exon 1915475 1915549 . - . ID=exon-LU631_RS10100-1;Parent=rna-LU631_RS10100;anticodon=(pos:complement(1915515..1915517));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10100;product=tRNA-Gln NZ_CP089940.1 RefSeq gene 1915588 1915662 . - . ID=gene-LU631_RS10105;Name=LU631_RS10105;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS10105;old_locus_tag=LU631_10105 NZ_CP089940.1 tRNAscan-SE tRNA 1915588 1915662 . - . ID=rna-LU631_RS10105;Parent=gene-LU631_RS10105;anticodon=(pos:complement(1915628..1915630));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10105;product=tRNA-Gln NZ_CP089940.1 tRNAscan-SE exon 1915588 1915662 . - . ID=exon-LU631_RS10105-1;Parent=rna-LU631_RS10105;anticodon=(pos:complement(1915628..1915630));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10105;product=tRNA-Gln NZ_CP089940.1 RefSeq gene 1915670 1915746 . - . ID=gene-LU631_RS10110;Name=LU631_RS10110;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS10110;old_locus_tag=LU631_10110 NZ_CP089940.1 tRNAscan-SE tRNA 1915670 1915746 . - . ID=rna-LU631_RS10110;Parent=gene-LU631_RS10110;anticodon=(pos:complement(1915710..1915712));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10110;product=tRNA-Met NZ_CP089940.1 tRNAscan-SE exon 1915670 1915746 . - . ID=exon-LU631_RS10110-1;Parent=rna-LU631_RS10110;anticodon=(pos:complement(1915710..1915712));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10110;product=tRNA-Met NZ_CP089940.1 RefSeq gene 1915790 1915864 . - . ID=gene-LU631_RS10115;Name=LU631_RS10115;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS10115;old_locus_tag=LU631_10115 NZ_CP089940.1 tRNAscan-SE tRNA 1915790 1915864 . - . ID=rna-LU631_RS10115;Parent=gene-LU631_RS10115;anticodon=(pos:complement(1915830..1915832));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10115;product=tRNA-Gln NZ_CP089940.1 tRNAscan-SE exon 1915790 1915864 . - . ID=exon-LU631_RS10115-1;Parent=rna-LU631_RS10115;anticodon=(pos:complement(1915830..1915832));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10115;product=tRNA-Gln NZ_CP089940.1 RefSeq gene 1915888 1915972 . - . ID=gene-LU631_RS10120;Name=LU631_RS10120;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS10120;old_locus_tag=LU631_10120 NZ_CP089940.1 tRNAscan-SE tRNA 1915888 1915972 . - . ID=rna-LU631_RS10120;Parent=gene-LU631_RS10120;anticodon=(pos:complement(1915936..1915938));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10120;product=tRNA-Leu NZ_CP089940.1 tRNAscan-SE exon 1915888 1915972 . - . ID=exon-LU631_RS10120-1;Parent=rna-LU631_RS10120;anticodon=(pos:complement(1915936..1915938));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10120;product=tRNA-Leu NZ_CP089940.1 RefSeq gene 1915980 1916056 . - . ID=gene-LU631_RS10125;Name=LU631_RS10125;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS10125;old_locus_tag=LU631_10125 NZ_CP089940.1 tRNAscan-SE tRNA 1915980 1916056 . - . ID=rna-LU631_RS10125;Parent=gene-LU631_RS10125;anticodon=(pos:complement(1916020..1916022));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10125;product=tRNA-Met NZ_CP089940.1 tRNAscan-SE exon 1915980 1916056 . - . ID=exon-LU631_RS10125-1;Parent=rna-LU631_RS10125;anticodon=(pos:complement(1916020..1916022));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10125;product=tRNA-Met NZ_CP089940.1 RefSeq gene 1916456 1918129 . - . ID=gene-LU631_RS10130;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=LU631_RS10130;old_locus_tag=LU631_10130 NZ_CP089940.1 Protein Homology CDS 1916456 1918129 . - 0 ID=cds-WP_016191924.1;Parent=gene-LU631_RS10130;Dbxref=Genbank:WP_016191924.1;Name=WP_016191924.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=LU631_RS10130;product=asparagine synthase B;protein_id=WP_016191924.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1918402 1919154 . - . ID=gene-LU631_RS10135;Name=LU631_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10135;old_locus_tag=LU631_10135 NZ_CP089940.1 Protein Homology CDS 1918402 1919154 . - 0 ID=cds-WP_016191925.1;Parent=gene-LU631_RS10135;Dbxref=Genbank:WP_016191925.1;Name=WP_016191925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308732.1;locus_tag=LU631_RS10135;product=HAD-IIA family hydrolase;protein_id=WP_016191925.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1919186 1920406 . - . ID=gene-LU631_RS10140;Name=LU631_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10140;old_locus_tag=LU631_10140 NZ_CP089940.1 Protein Homology CDS 1919186 1920406 . - 0 ID=cds-WP_016191926.1;Parent=gene-LU631_RS10140;Dbxref=Genbank:WP_016191926.1;Name=WP_016191926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308733.1;locus_tag=LU631_RS10140;product=ROK family transcriptional regulator;protein_id=WP_016191926.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1920423 1921562 . - . ID=gene-LU631_RS10145;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=LU631_RS10145;old_locus_tag=LU631_10145 NZ_CP089940.1 Protein Homology CDS 1920423 1921562 . - 0 ID=cds-WP_016191927.1;Parent=gene-LU631_RS10145;Dbxref=Genbank:WP_016191927.1;Name=WP_016191927.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376951.1;locus_tag=LU631_RS10145;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_016191927.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1921614 1922414 . - . ID=gene-LU631_RS10150;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=LU631_RS10150;old_locus_tag=LU631_10150 NZ_CP089940.1 Protein Homology CDS 1921614 1922414 . - 0 ID=cds-WP_016191928.1;Parent=gene-LU631_RS10150;Dbxref=Genbank:WP_016191928.1;Name=WP_016191928.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459669.1;locus_tag=LU631_RS10150;product=glucosamine-6-phosphate deaminase;protein_id=WP_016191928.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1922750 1924777 . + . ID=gene-LU631_RS10155;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=LU631_RS10155;old_locus_tag=LU631_10155 NZ_CP089940.1 Protein Homology CDS 1922750 1924777 . + 0 ID=cds-WP_016191929.1;Parent=gene-LU631_RS10155;Dbxref=Genbank:WP_016191929.1;Name=WP_016191929.1;Ontology_term=GO:0015572;gbkey=CDS;gene=nagE;go_function=N-acetylglucosamine transmembrane transporter activity|0015572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593180.1;locus_tag=LU631_RS10155;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;protein_id=WP_016191929.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1925054 1926721 . + . ID=gene-LU631_RS10160;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=LU631_RS10160;old_locus_tag=LU631_10160 NZ_CP089940.1 Protein Homology CDS 1925054 1926721 . + 0 ID=cds-WP_016191930.1;Parent=gene-LU631_RS10160;Dbxref=Genbank:WP_016191930.1;Name=WP_016191930.1;Ontology_term=GO:0006425,GO:0004819,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=glutamine-tRNA ligase activity|0004819||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442044.1;locus_tag=LU631_RS10160;product=glutamine--tRNA ligase;protein_id=WP_016191930.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1927966 1929369 . + . ID=gene-LU631_RS10165;Name=LU631_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10165;old_locus_tag=LU631_10165 NZ_CP089940.1 Protein Homology CDS 1927966 1929369 . + 0 ID=cds-WP_016191931.1;Parent=gene-LU631_RS10165;Dbxref=Genbank:WP_016191931.1;Name=WP_016191931.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008925068.1;locus_tag=LU631_RS10165;product=OprD family outer membrane porin;protein_id=WP_016191931.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1929408 1929602 . + . ID=gene-LU631_RS10170;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=LU631_RS10170;old_locus_tag=LU631_10170 NZ_CP089940.1 Protein Homology CDS 1929408 1929602 . + 0 ID=cds-WP_016191932.1;Parent=gene-LU631_RS10170;Dbxref=Genbank:WP_016191932.1;Name=WP_016191932.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: protein motif:HMM:NF025348.2;locus_tag=LU631_RS10170;product=ChiQ/YbfN family lipoprotein;protein_id=WP_016191932.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1929620 1932274 . + . ID=gene-LU631_RS10175;Name=LU631_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10175;old_locus_tag=LU631_10175 NZ_CP089940.1 Protein Homology CDS 1929620 1932274 . + 0 ID=cds-WP_016191933.1;Parent=gene-LU631_RS10175;Dbxref=Genbank:WP_016191933.1;Name=WP_016191933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454059.1;locus_tag=LU631_RS10175;product=beta-N-acetylhexosaminidase;protein_id=WP_016191933.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1932240 1932794 . + . ID=gene-LU631_RS10180;Name=LU631_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10180;old_locus_tag=LU631_10180 NZ_CP089940.1 GeneMarkS-2+ CDS 1932240 1932794 . + 0 ID=cds-WP_152664145.1;Parent=gene-LU631_RS10180;Dbxref=Genbank:WP_152664145.1;Name=WP_152664145.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS10180;product=hypothetical protein;protein_id=WP_152664145.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1933787 1934368 . + . ID=gene-LU631_RS10185;Name=LU631_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10185;old_locus_tag=LU631_10185 NZ_CP089940.1 GeneMarkS-2+ CDS 1933787 1934368 . + 0 ID=cds-WP_152664146.1;Parent=gene-LU631_RS10185;Dbxref=Genbank:WP_152664146.1;Name=WP_152664146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS10185;product=hypothetical protein;protein_id=WP_152664146.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1934726 1935172 . - . ID=gene-LU631_RS10190;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=LU631_RS10190;old_locus_tag=LU631_10190 NZ_CP089940.1 Protein Homology CDS 1934726 1935172 . - 0 ID=cds-WP_016191936.1;Parent=gene-LU631_RS10190;Dbxref=Genbank:WP_016191936.1;Name=WP_016191936.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454058.1;locus_tag=LU631_RS10190;product=ferric iron uptake transcriptional regulator;protein_id=WP_016191936.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1935536 1936066 . - . ID=gene-LU631_RS10195;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=LU631_RS10195;old_locus_tag=LU631_10195 NZ_CP089940.1 Protein Homology CDS 1935536 1936066 . - 0 ID=cds-WP_016191937.1;Parent=gene-LU631_RS10195;Dbxref=Genbank:WP_016191937.1;Name=WP_016191937.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308742.1;locus_tag=LU631_RS10195;product=flavodoxin FldA;protein_id=WP_016191937.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1936223 1936504 . - . ID=gene-LU631_RS10200;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=LU631_RS10200;old_locus_tag=LU631_10200 NZ_CP089940.1 Protein Homology CDS 1936223 1936504 . - 0 ID=cds-WP_016191938.1;Parent=gene-LU631_RS10200;Dbxref=Genbank:WP_016191938.1;Name=WP_016191938.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163374.1;locus_tag=LU631_RS10200;product=LexA regulated protein;protein_id=WP_016191938.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1936655 1937425 . - . ID=gene-LU631_RS10205;Name=LU631_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10205;old_locus_tag=LU631_10205 NZ_CP089940.1 Protein Homology CDS 1936655 1937425 . - 0 ID=cds-WP_016191939.1;Parent=gene-LU631_RS10205;Dbxref=Genbank:WP_016191939.1;Name=WP_016191939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172278.1;locus_tag=LU631_RS10205;product=alpha/beta fold hydrolase;protein_id=WP_016191939.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1937684 1938235 . + . ID=gene-LU631_RS10210;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=LU631_RS10210;old_locus_tag=LU631_10210 NZ_CP089940.1 Protein Homology CDS 1937684 1938235 . + 0 ID=cds-WP_016191940.1;Parent=gene-LU631_RS10210;Dbxref=Genbank:WP_016191940.1;Name=WP_016191940.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357126.1;locus_tag=LU631_RS10210;product=replication initiation negative regulator SeqA;protein_id=WP_016191940.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1938266 1939906 . + . ID=gene-LU631_RS10215;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=LU631_RS10215;old_locus_tag=LU631_10215 NZ_CP089940.1 Protein Homology CDS 1938266 1939906 . + 0 ID=cds-WP_016191941.1;Parent=gene-LU631_RS10215;Dbxref=Genbank:WP_016191941.1;Name=WP_016191941.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415214.1;locus_tag=LU631_RS10215;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_016191941.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1940215 1940898 . - . ID=gene-LU631_RS10220;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=LU631_RS10220;old_locus_tag=LU631_10220 NZ_CP089940.1 Protein Homology CDS 1940215 1940898 . - 0 ID=cds-WP_016191942.1;Parent=gene-LU631_RS10220;Dbxref=Genbank:WP_016191942.1;Name=WP_016191942.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169177.1;locus_tag=LU631_RS10220;product=two-component system response regulator KdpE;protein_id=WP_016191942.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1941712 1942668 . + . ID=gene-LU631_RS10225;Name=LU631_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10225;old_locus_tag=LU631_10225 NZ_CP089940.1 Protein Homology CDS 1941712 1942668 . + 0 ID=cds-WP_016191943.1;Parent=gene-LU631_RS10225;Dbxref=Genbank:WP_016191943.1;Name=WP_016191943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543746.1;locus_tag=LU631_RS10225;product=DUF523 and DUF1722 domain-containing protein;protein_id=WP_016191943.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1942690 1944111 . + . ID=gene-LU631_RS10230;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=LU631_RS10230;old_locus_tag=LU631_10230 NZ_CP089940.1 Protein Homology CDS 1942690 1944111 . + 0 ID=cds-WP_016191944.1;Parent=gene-LU631_RS10230;Dbxref=Genbank:WP_016191944.1;Name=WP_016191944.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799224.1;locus_tag=LU631_RS10230;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_016191944.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1944227 1944970 . + . ID=gene-LU631_RS10235;Name=LU631_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10235;old_locus_tag=LU631_10235 NZ_CP089940.1 Protein Homology CDS 1944227 1944970 . + 0 ID=cds-WP_016191945.1;Parent=gene-LU631_RS10235;Dbxref=Genbank:WP_016191945.1;Name=WP_016191945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798871.1;locus_tag=LU631_RS10235;product=type 2 GTP cyclohydrolase I;protein_id=WP_016191945.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1945084 1945740 . + . ID=gene-LU631_RS10240;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=LU631_RS10240;old_locus_tag=LU631_10240 NZ_CP089940.1 Protein Homology CDS 1945084 1945740 . + 0 ID=cds-WP_016191946.1;Parent=gene-LU631_RS10240;Dbxref=Genbank:WP_016191946.1;Name=WP_016191946.1;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010299167.1;locus_tag=LU631_RS10240;product=5-oxoprolinase subunit PxpB;protein_id=WP_016191946.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1945734 1946672 . + . ID=gene-LU631_RS10245;Name=LU631_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10245;old_locus_tag=LU631_10245 NZ_CP089940.1 Protein Homology CDS 1945734 1946672 . + 0 ID=cds-WP_016191947.1;Parent=gene-LU631_RS10245;Dbxref=Genbank:WP_016191947.1;Name=WP_016191947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668723.1;locus_tag=LU631_RS10245;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_016191947.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1946656 1947394 . + . ID=gene-LU631_RS10250;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=pseudogene;locus_tag=LU631_RS10250;old_locus_tag=LU631_10250;pseudo=true NZ_CP089940.1 Protein Homology CDS 1946656 1947394 . + 0 ID=cds-LU631_RS10250;Parent=gene-LU631_RS10250;Note=frameshifted;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811916.1;locus_tag=LU631_RS10250;product=5-oxoprolinase subunit PxpA;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1947491 1947847 . - . ID=gene-LU631_RS10255;Name=LU631_RS10255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10255;old_locus_tag=LU631_10255;partial=true;pseudo=true;start_range=.,1947491 NZ_CP089940.1 Protein Homology CDS 1947491 1947847 . - 0 ID=cds-LU631_RS10255;Parent=gene-LU631_RS10255;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS10255;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,1947491;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1948161 1948944 . + . ID=gene-LU631_RS10260;Name=nei;gbkey=Gene;gene=nei;gene_biotype=pseudogene;locus_tag=LU631_RS10260;old_locus_tag=LU631_10260;pseudo=true NZ_CP089940.1 Protein Homology CDS 1948161 1948944 . + 0 ID=cds-LU631_RS10260;Parent=gene-LU631_RS10260;Note=frameshifted;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746462.1;locus_tag=LU631_RS10260;product=endonuclease VIII;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1948978 1950261 . - . ID=gene-LU631_RS10265;Name=LU631_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10265;old_locus_tag=LU631_10265 NZ_CP089940.1 Protein Homology CDS 1948978 1950261 . - 0 ID=cds-WP_016191953.1;Parent=gene-LU631_RS10265;Dbxref=Genbank:WP_016191953.1;Name=WP_016191953.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156668.1;locus_tag=LU631_RS10265;product=citrate synthase;protein_id=WP_016191953.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1950874 1951263 . + . ID=gene-LU631_RS10270;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=LU631_RS10270;old_locus_tag=LU631_10270 NZ_CP089940.1 Protein Homology CDS 1950874 1951263 . + 0 ID=cds-WP_016191954.1;Parent=gene-LU631_RS10270;Dbxref=Genbank:WP_016191954.1;Name=WP_016191954.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045281;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,succinate dehydrogenase complex|0045281||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210722.1;locus_tag=LU631_RS10270;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_016191954.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1951257 1951604 . + . ID=gene-LU631_RS10275;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=LU631_RS10275;old_locus_tag=LU631_10275 NZ_CP089940.1 Protein Homology CDS 1951257 1951604 . + 0 ID=cds-WP_016191955.1;Parent=gene-LU631_RS10275;Dbxref=Genbank:WP_016191955.1;Name=WP_016191955.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082678.1;locus_tag=LU631_RS10275;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_016191955.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1951606 1953372 . + . ID=gene-LU631_RS10280;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=LU631_RS10280;old_locus_tag=LU631_10280 NZ_CP089940.1 Protein Homology CDS 1951606 1953372 . + 0 ID=cds-WP_016191956.1;Parent=gene-LU631_RS10280;Dbxref=Genbank:WP_016191956.1;Name=WP_016191956.1;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=LU631_RS10280;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_016191956.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1953391 1954107 . + . ID=gene-LU631_RS10285;Name=LU631_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10285;old_locus_tag=LU631_10285 NZ_CP089940.1 Protein Homology CDS 1953391 1954107 . + 0 ID=cds-WP_016191957.1;Parent=gene-LU631_RS10285;Dbxref=Genbank:WP_016191957.1;Name=WP_016191957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225868.1;locus_tag=LU631_RS10285;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_016191957.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1954388 1957195 . + . ID=gene-LU631_RS10290;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=LU631_RS10290;old_locus_tag=LU631_10290 NZ_CP089940.1 Protein Homology CDS 1954388 1957195 . + 0 ID=cds-WP_016191958.1;Parent=gene-LU631_RS10290;Dbxref=Genbank:WP_016191958.1;Name=WP_016191958.1;Ontology_term=GO:0006099,GO:0006554,GO:0006568,GO:0004591,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,lysine catabolic process|0006554||IEA,tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225869.1;locus_tag=LU631_RS10290;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_016191958.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1957210 1958430 . + . ID=gene-LU631_RS10295;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=LU631_RS10295;old_locus_tag=LU631_10295 NZ_CP089940.1 Protein Homology CDS 1957210 1958430 . + 0 ID=cds-WP_016191959.1;Parent=gene-LU631_RS10295;Dbxref=Genbank:WP_016191959.1;Name=WP_016191959.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308779.1;locus_tag=LU631_RS10295;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_016191959.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1958534 1959700 . + . ID=gene-LU631_RS10300;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=LU631_RS10300;old_locus_tag=LU631_10300 NZ_CP089940.1 Protein Homology CDS 1958534 1959700 . + 0 ID=cds-WP_016191960.1;Parent=gene-LU631_RS10300;Dbxref=Genbank:WP_016191960.1;Name=WP_016191960.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=LU631_RS10300;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_016191960.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1959700 1960575 . + . ID=gene-LU631_RS10305;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=LU631_RS10305;old_locus_tag=LU631_10305 NZ_CP089940.1 Protein Homology CDS 1959700 1960575 . + 0 ID=cds-WP_016191961.1;Parent=gene-LU631_RS10305;Dbxref=Genbank:WP_016191961.1;Name=WP_016191961.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003853148.1;locus_tag=LU631_RS10305;product=succinate--CoA ligase subunit alpha;protein_id=WP_016191961.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1960738 1961435 . + . ID=gene-LU631_RS10310;Name=LU631_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10310;old_locus_tag=LU631_10310 NZ_CP089940.1 Protein Homology CDS 1960738 1960987 . + 0 ID=cds-WP_233482013.1;Parent=gene-LU631_RS10310;Dbxref=Genbank:WP_233482013.1;Name=WP_233482013.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS10310;product=IS1 family transposase;protein_id=WP_233482013.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 1960987 1961435 . + 2 ID=cds-WP_233482013.1;Parent=gene-LU631_RS10310;Dbxref=Genbank:WP_233482013.1;Name=WP_233482013.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS10310;product=IS1 family transposase;protein_id=WP_233482013.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1961959 1963545 . + . ID=gene-LU631_RS10315;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=LU631_RS10315;old_locus_tag=LU631_10315 NZ_CP089940.1 Protein Homology CDS 1961959 1963545 . + 0 ID=cds-WP_016191962.1;Parent=gene-LU631_RS10315;Dbxref=Genbank:WP_016191962.1;Name=WP_016191962.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799189.1;locus_tag=LU631_RS10315;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_016191962.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1963542 1964681 . + . ID=gene-LU631_RS10320;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=LU631_RS10320;old_locus_tag=LU631_10320 NZ_CP089940.1 Protein Homology CDS 1963542 1964681 . + 0 ID=cds-WP_016191963.1;Parent=gene-LU631_RS10320;Dbxref=Genbank:WP_016191963.1;Name=WP_016191963.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308796.1;locus_tag=LU631_RS10320;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_016191963.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1964697 1964807 . + . ID=gene-LU631_RS10325;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=LU631_RS10325;old_locus_tag=LU631_10325 NZ_CP089940.1 Protein Homology CDS 1964697 1964807 . + 0 ID=cds-WP_016191964.1;Parent=gene-LU631_RS10325;Dbxref=Genbank:WP_016191964.1;Name=WP_016191964.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012016632.1;locus_tag=LU631_RS10325;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_016191964.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1965292 1965696 . + . ID=gene-LU631_RS10330;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=LU631_RS10330;old_locus_tag=LU631_10330 NZ_CP089940.1 Protein Homology CDS 1965292 1965696 . + 0 ID=cds-WP_016191965.1;Parent=gene-LU631_RS10330;Dbxref=Genbank:WP_016191965.1;Name=WP_016191965.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965302.1;locus_tag=LU631_RS10330;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_016191965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1965693 1966376 . + . ID=gene-LU631_RS10335;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=LU631_RS10335;old_locus_tag=LU631_10335 NZ_CP089940.1 Protein Homology CDS 1965693 1966376 . + 0 ID=cds-WP_016191966.1;Parent=gene-LU631_RS10335;Dbxref=Genbank:WP_016191966.1;Name=WP_016191966.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671365.1;locus_tag=LU631_RS10335;product=Tol-Pal system protein TolQ;protein_id=WP_016191966.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1966385 1966813 . + . ID=gene-LU631_RS10340;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=LU631_RS10340;old_locus_tag=LU631_10340 NZ_CP089940.1 Protein Homology CDS 1966385 1966813 . + 0 ID=cds-WP_016191967.1;Parent=gene-LU631_RS10340;Dbxref=Genbank:WP_016191967.1;Name=WP_016191967.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=LU631_RS10340;product=colicin uptake protein TolR;protein_id=WP_016191967.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1966843 1967994 . + . ID=gene-LU631_RS10345;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=LU631_RS10345;old_locus_tag=LU631_10345 NZ_CP089940.1 Protein Homology CDS 1966843 1967994 . + 0 ID=cds-WP_016191968.1;Parent=gene-LU631_RS10345;Dbxref=Genbank:WP_016191968.1;Name=WP_016191968.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010260767.1;locus_tag=LU631_RS10345;product=cell envelope integrity protein TolA;protein_id=WP_016191968.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1968113 1969405 . + . ID=gene-LU631_RS10350;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=LU631_RS10350;old_locus_tag=LU631_10350 NZ_CP089940.1 Protein Homology CDS 1968113 1969405 . + 0 ID=cds-WP_016191969.1;Parent=gene-LU631_RS10350;Dbxref=Genbank:WP_016191969.1;Name=WP_016191969.1;Ontology_term=GO:0006810,GO:0005215,GO:0030288;gbkey=CDS;gene=tolB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308802.1;locus_tag=LU631_RS10350;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_016191969.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1969450 1969965 . + . ID=gene-LU631_RS10355;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=LU631_RS10355;old_locus_tag=LU631_10355 NZ_CP089940.1 Protein Homology CDS 1969450 1969965 . + 0 ID=cds-WP_016191970.1;Parent=gene-LU631_RS10355;Dbxref=Genbank:WP_016191970.1;Name=WP_016191970.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156682.1;locus_tag=LU631_RS10355;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_016191970.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1969975 1970751 . + . ID=gene-LU631_RS10360;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=LU631_RS10360;old_locus_tag=LU631_10360 NZ_CP089940.1 Protein Homology CDS 1969975 1970751 . + 0 ID=cds-WP_016191971.1;Parent=gene-LU631_RS10360;Dbxref=Genbank:WP_016191971.1;Name=WP_016191971.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156683.1;locus_tag=LU631_RS10360;product=cell division protein CpoB;protein_id=WP_016191971.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1970917 1970992 . + . ID=gene-LU631_RS10365;Name=LU631_RS10365;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS10365;old_locus_tag=LU631_10365 NZ_CP089940.1 tRNAscan-SE tRNA 1970917 1970992 . + . ID=rna-LU631_RS10365;Parent=gene-LU631_RS10365;anticodon=(pos:1970950..1970952);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10365;product=tRNA-Lys NZ_CP089940.1 tRNAscan-SE exon 1970917 1970992 . + . ID=exon-LU631_RS10365-1;Parent=rna-LU631_RS10365;anticodon=(pos:1970950..1970952);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10365;product=tRNA-Lys NZ_CP089940.1 RefSeq gene 1971052 1971127 . + . ID=gene-LU631_RS10370;Name=LU631_RS10370;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS10370;old_locus_tag=LU631_10370 NZ_CP089940.1 tRNAscan-SE tRNA 1971052 1971127 . + . ID=rna-LU631_RS10370;Parent=gene-LU631_RS10370;anticodon=(pos:1971085..1971087);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10370;product=tRNA-Lys NZ_CP089940.1 tRNAscan-SE exon 1971052 1971127 . + . ID=exon-LU631_RS10370-1;Parent=rna-LU631_RS10370;anticodon=(pos:1971085..1971087);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10370;product=tRNA-Lys NZ_CP089940.1 RefSeq pseudogene 1971294 1972668 . - . ID=gene-LU631_RS10375;Name=LU631_RS10375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10375;old_locus_tag=LU631_10375;pseudo=true NZ_CP089940.1 Protein Homology CDS 1971294 1972668 . - 0 ID=cds-LU631_RS10375;Parent=gene-LU631_RS10375;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013508316.1;locus_tag=LU631_RS10375;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1972842 1973369 . + . ID=gene-LU631_RS10380;Name=LU631_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10380;old_locus_tag=LU631_10380 NZ_CP089940.1 Protein Homology CDS 1972842 1973369 . + 0 ID=cds-WP_016191974.1;Parent=gene-LU631_RS10380;Dbxref=Genbank:WP_016191974.1;Name=WP_016191974.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201339.1;locus_tag=LU631_RS10380;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_016191974.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1973490 1974523 . + . ID=gene-LU631_RS10385;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=pseudogene;locus_tag=LU631_RS10385;old_locus_tag=LU631_10385;pseudo=true NZ_CP089940.1 Protein Homology CDS 1973490 1974523 . + 0 ID=cds-LU631_RS10385;Parent=gene-LU631_RS10385;Note=frameshifted;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456177.1;locus_tag=LU631_RS10385;product=quinolinate synthase NadA;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1974560 1975270 . + . ID=gene-LU631_RS10390;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=LU631_RS10390;old_locus_tag=LU631_10390 NZ_CP089940.1 Protein Homology CDS 1974560 1975270 . + 0 ID=cds-WP_016191977.1;Parent=gene-LU631_RS10390;Dbxref=Genbank:WP_016191977.1;Name=WP_016191977.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000345369.1;locus_tag=LU631_RS10390;product=nicotinamide riboside transporter PnuC;protein_id=WP_016191977.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1975324 1975812 . - . ID=gene-LU631_RS10395;Name=LU631_RS10395;end_range=1975812,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10395;old_locus_tag=LU631_10395;partial=true;pseudo=true;start_range=.,1975324 NZ_CP089940.1 Protein Homology CDS 1975324 1975812 . - 0 ID=cds-LU631_RS10395;Parent=gene-LU631_RS10395;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006812,GO:0008324,GO:0015562,GO:0016020;end_range=1975812,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cation transmembrane transporter activity|0008324||IEA,efflux transmembrane transporter activity|0015562||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156689.1;locus_tag=LU631_RS10395;partial=true;product=cation diffusion facilitator family transporter;pseudo=true;start_range=.,1975324;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1976185 1976316 . - . ID=gene-LU631_RS10400;Name=LU631_RS10400;end_range=1976316,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10400;old_locus_tag=LU631_10400;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1976185 1976316 . - 0 ID=cds-LU631_RS10400;Parent=gene-LU631_RS10400;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1976316,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192772.1;locus_tag=LU631_RS10400;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1976327 1977501 . - . ID=gene-LU631_RS10405;Name=LU631_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10405;old_locus_tag=LU631_10405 NZ_CP089940.1 Protein Homology CDS 1977246 1977501 . - 0 ID=cds-WP_152664147.1;Parent=gene-LU631_RS10405;Dbxref=Genbank:WP_152664147.1;Name=WP_152664147.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612096.1;locus_tag=LU631_RS10405;product=IS3 family transposase;protein_id=WP_152664147.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 1976327 1977246 . - 2 ID=cds-WP_152664147.1;Parent=gene-LU631_RS10405;Dbxref=Genbank:WP_152664147.1;Name=WP_152664147.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612096.1;locus_tag=LU631_RS10405;product=IS3 family transposase;protein_id=WP_152664147.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1977574 1977882 . - . ID=gene-LU631_RS10410;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS10410;old_locus_tag=LU631_10410;partial=true;pseudo=true;start_range=.,1977574 NZ_CP089940.1 Protein Homology CDS 1977574 1977882 . - 0 ID=cds-LU631_RS10410;Parent=gene-LU631_RS10410;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU631_RS10410;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,1977574;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1978045 1978399 . - . ID=gene-LU631_RS10415;Name=LU631_RS10415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10415;old_locus_tag=LU631_10415;pseudo=true NZ_CP089940.1 Protein Homology CDS 1978045 1978399 . - 0 ID=cds-LU631_RS10415;Parent=gene-LU631_RS10415;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010260164.1;locus_tag=LU631_RS10415;product=protein YbgS;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1978683 1979735 . + . ID=gene-LU631_RS10420;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=LU631_RS10420;old_locus_tag=LU631_10420 NZ_CP089940.1 Protein Homology CDS 1978683 1979735 . + 0 ID=cds-WP_016191980.1;Parent=gene-LU631_RS10420;Dbxref=Genbank:WP_016191980.1;Name=WP_016191980.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020457071.1;locus_tag=LU631_RS10420;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_016191980.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1979790 1980542 . - . ID=gene-LU631_RS10425;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=LU631_RS10425;old_locus_tag=LU631_10425 NZ_CP089940.1 Protein Homology CDS 1979790 1980542 . - 0 ID=cds-WP_016191981.1;Parent=gene-LU631_RS10425;Dbxref=Genbank:WP_016191981.1;Name=WP_016191981.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=LU631_RS10425;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_016191981.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1980696 1981736 . - . ID=gene-LU631_RS10430;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=LU631_RS10430;old_locus_tag=LU631_10430 NZ_CP089940.1 Protein Homology CDS 1980696 1981736 . - 0 ID=cds-WP_016191982.1;Parent=gene-LU631_RS10430;Dbxref=Genbank:WP_016191982.1;Name=WP_016191982.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156698.1;locus_tag=LU631_RS10430;product=galactose-1-epimerase;protein_id=WP_016191982.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1981730 1982878 . - . ID=gene-LU631_RS10435;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=LU631_RS10435;old_locus_tag=LU631_10435 NZ_CP089940.1 Protein Homology CDS 1981730 1982878 . - 0 ID=cds-WP_016191983.1;Parent=gene-LU631_RS10435;Dbxref=Genbank:WP_016191983.1;Name=WP_016191983.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851889.1;locus_tag=LU631_RS10435;product=galactokinase;protein_id=WP_016191983.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1982881 1983927 . - . ID=gene-LU631_RS10440;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=LU631_RS10440;old_locus_tag=LU631_10440 NZ_CP089940.1 Protein Homology CDS 1982881 1983927 . - 0 ID=cds-WP_016191984.1;Parent=gene-LU631_RS10440;Dbxref=Genbank:WP_016191984.1;Name=WP_016191984.1;Ontology_term=GO:0006012,GO:0008108;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201350.1;locus_tag=LU631_RS10440;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_016191984.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1984201 1984556 . + . ID=gene-LU631_RS10445;Name=LU631_RS10445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10445;old_locus_tag=LU631_10445;partial=true;pseudo=true;start_range=.,1984201 NZ_CP089940.1 Protein Homology CDS 1984201 1984556 . + 0 ID=cds-LU631_RS10445;Parent=gene-LU631_RS10445;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296746.1;locus_tag=LU631_RS10445;partial=true;product=glutamine synthetase;pseudo=true;start_range=.,1984201;transl_table=11 NZ_CP089940.1 RefSeq gene 1984817 1985014 . + . ID=gene-LU631_RS10450;Name=LU631_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10450;old_locus_tag=LU631_10450 NZ_CP089940.1 Protein Homology CDS 1984817 1985014 . + 0 ID=cds-WP_016191986.1;Parent=gene-LU631_RS10450;Dbxref=Genbank:WP_016191986.1;Name=WP_016191986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888863.1;locus_tag=LU631_RS10450;product=hypothetical protein;protein_id=WP_016191986.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1985004 1986371 . + . ID=gene-LU631_RS10455;Name=LU631_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10455;old_locus_tag=LU631_10455 NZ_CP089940.1 Protein Homology CDS 1985004 1986371 . + 0 ID=cds-WP_016191987.1;Parent=gene-LU631_RS10455;Dbxref=Genbank:WP_016191987.1;Name=WP_016191987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158268.1;locus_tag=LU631_RS10455;product=APC family permease;protein_id=WP_016191987.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1986530 1986967 . + . ID=gene-LU631_RS10460;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS10460;old_locus_tag=LU631_10460 NZ_CP089940.1 Protein Homology CDS 1986530 1986967 . + 0 ID=cds-WP_046371836.1;Parent=gene-LU631_RS10460;Dbxref=Genbank:WP_046371836.1;Name=WP_046371836.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS10460;product=IS200/IS605 family transposase;protein_id=WP_046371836.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1987068 1987406 . + . ID=gene-LU631_RS10465;Name=LU631_RS10465;end_range=1987406,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10465;old_locus_tag=LU631_10465;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1987068 1987406 . + 0 ID=cds-LU631_RS10465;Parent=gene-LU631_RS10465;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1987406,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS10465;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1987615 1989144 . + . ID=gene-LU631_RS10470;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=LU631_RS10470;old_locus_tag=LU631_10470 NZ_CP089940.1 Protein Homology CDS 1987615 1989144 . + 0 ID=cds-WP_046371812.1;Parent=gene-LU631_RS10470;Dbxref=Genbank:WP_046371812.1;Name=WP_046371812.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001907982.1;locus_tag=LU631_RS10470;product=IS21 family transposase;protein_id=WP_046371812.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1989155 1989898 . + . ID=gene-LU631_RS10475;Name=istB;gbkey=Gene;gene=istB;gene_biotype=pseudogene;locus_tag=LU631_RS10475;old_locus_tag=LU631_10475;pseudo=true NZ_CP089940.1 Protein Homology CDS 1989155 1989898 . + 0 ID=cds-LU631_RS10475;Parent=gene-LU631_RS10475;Note=internal stop;Ontology_term=GO:0005524;gbkey=CDS;gene=istB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802959.1;locus_tag=LU631_RS10475;product=IS21-like element helper ATPase IstB;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1989963 1990568 . + . ID=gene-LU631_RS10480;Name=LU631_RS10480;end_range=1990568,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10480;old_locus_tag=LU631_10480;partial=true;pseudo=true;start_range=.,1989963 NZ_CP089940.1 Protein Homology CDS 1989963 1990568 . + 0 ID=cds-LU631_RS10480;Parent=gene-LU631_RS10480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=1990568,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU631_RS10480;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,1989963;transl_table=11 NZ_CP089940.1 RefSeq gene 1990627 1991667 . - . ID=gene-LU631_RS10485;Name=LU631_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10485;old_locus_tag=LU631_10485 NZ_CP089940.1 Protein Homology CDS 1990627 1991667 . - 0 ID=cds-WP_046371813.1-8;Parent=gene-LU631_RS10485;Dbxref=Genbank:WP_046371813.1;Name=WP_046371813.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS10485;product=IS481 family transposase;protein_id=WP_046371813.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1991768 1992061 . + . ID=gene-LU631_RS10490;Name=LU631_RS10490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10490;old_locus_tag=LU631_10490;partial=true;pseudo=true;start_range=.,1991768 NZ_CP089940.1 Protein Homology CDS 1991768 1992061 . + 0 ID=cds-LU631_RS10490;Parent=gene-LU631_RS10490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS10490;partial=true;product=transposase;pseudo=true;start_range=.,1991768;transl_table=11 NZ_CP089940.1 RefSeq gene 1992087 1992533 . - . ID=gene-LU631_RS10495;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS10495;old_locus_tag=LU631_10495 NZ_CP089940.1 Protein Homology CDS 1992087 1992533 . - 0 ID=cds-WP_016191989.1;Parent=gene-LU631_RS10495;Dbxref=Genbank:WP_016191989.1;Name=WP_016191989.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS10495;product=IS200/IS605 family transposase;protein_id=WP_016191989.1;transl_table=11 NZ_CP089940.1 RefSeq gene 1992920 1994347 . - . ID=gene-LU631_RS10500;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=LU631_RS10500;old_locus_tag=LU631_10500 NZ_CP089940.1 Protein Homology CDS 1992920 1994347 . - 0 ID=cds-WP_016191990.1;Parent=gene-LU631_RS10500;Dbxref=Genbank:WP_016191990.1;Name=WP_016191990.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008852;gbkey=CDS;gene=sbcB;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,exodeoxyribonuclease I activity|0008852||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441101.1;locus_tag=LU631_RS10500;product=exodeoxyribonuclease I;protein_id=WP_016191990.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1994510 1994659 . + . ID=gene-LU631_RS10505;Name=LU631_RS10505;end_range=1994659,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10505;old_locus_tag=LU631_10505;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 1994510 1994659 . + 0 ID=cds-LU631_RS10505;Parent=gene-LU631_RS10505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1994659,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=LU631_RS10505;partial=true;product=integrase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1994913 1996135 . - . ID=gene-LU631_RS10510;Name=LU631_RS10510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10510;old_locus_tag=LU631_10510;pseudo=true NZ_CP089940.1 Protein Homology CDS 1994913 1996135 . - 0 ID=cds-LU631_RS10510;Parent=gene-LU631_RS10510;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025244073.1;locus_tag=LU631_RS10510;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1996582 1997584 . + . ID=gene-LU631_RS10515;Name=LU631_RS10515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10515;old_locus_tag=LU631_10515;pseudo=true NZ_CP089940.1 Protein Homology CDS 1996582 1997584 . + 0 ID=cds-LU631_RS10515;Parent=gene-LU631_RS10515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158517.1;locus_tag=LU631_RS10515;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 1997866 1998726 . - . ID=gene-LU631_RS10520;Name=LU631_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10520;old_locus_tag=LU631_10520 NZ_CP089940.1 Protein Homology CDS 1997866 1998726 . - 0 ID=cds-WP_016191991.1;Parent=gene-LU631_RS10520;Dbxref=Genbank:WP_016191991.1;Name=WP_016191991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800196.1;locus_tag=LU631_RS10520;product=acyltransferase;protein_id=WP_016191991.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 1998798 2000123 . + . ID=gene-LU631_RS10525;Name=LU631_RS10525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10525;old_locus_tag=LU631_10525;pseudo=true NZ_CP089940.1 Protein Homology CDS 1998798 2000123 . + 0 ID=cds-LU631_RS10525;Parent=gene-LU631_RS10525;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS10525;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2000114 2000443 . - . ID=gene-LU631_RS10530;Name=LU631_RS10530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10530;old_locus_tag=LU631_10530;partial=true;pseudo=true;start_range=.,2000114 NZ_CP089940.1 Protein Homology CDS 2000114 2000443 . - 0 ID=cds-LU631_RS10530;Parent=gene-LU631_RS10530;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009089773.1;locus_tag=LU631_RS10530;partial=true;product=acyltransferase family protein;pseudo=true;start_range=.,2000114;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2000741 2001216 . + . ID=gene-LU631_RS10535;Name=LU631_RS10535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10535;old_locus_tag=LU631_10535;partial=true;pseudo=true;start_range=.,2000741 NZ_CP089940.1 Protein Homology CDS 2000741 2001216 . + 0 ID=cds-LU631_RS10535;Parent=gene-LU631_RS10535;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297906.1;locus_tag=LU631_RS10535;partial=true;product=transposase;pseudo=true;start_range=.,2000741;transl_table=11 NZ_CP089940.1 RefSeq gene 2001242 2001382 . - . ID=gene-LU631_RS10540;Name=LU631_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10540;old_locus_tag=LU631_10540 NZ_CP089940.1 GeneMarkS-2+ CDS 2001242 2001382 . - 0 ID=cds-WP_016191994.1;Parent=gene-LU631_RS10540;Dbxref=Genbank:WP_016191994.1;Name=WP_016191994.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS10540;product=Transposon resolvase;protein_id=WP_016191994.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2001635 2002808 . + . ID=gene-LU631_RS10545;Name=LU631_RS10545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10545;old_locus_tag=LU631_10545;pseudo=true NZ_CP089940.1 Protein Homology CDS 2001635 2002808 . + 0 ID=cds-LU631_RS10545;Parent=gene-LU631_RS10545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014675.2;locus_tag=LU631_RS10545;product=family 10 glycosylhydrolase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2002811 2003587 . + . ID=gene-LU631_RS10550;Name=LU631_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10550;old_locus_tag=LU631_10550 NZ_CP089940.1 Protein Homology CDS 2002811 2003587 . + 0 ID=cds-WP_016191995.1;Parent=gene-LU631_RS10550;Dbxref=Genbank:WP_016191995.1;Name=WP_016191995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120401.1;locus_tag=LU631_RS10550;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_016191995.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2003673 2004095 . + . ID=gene-LU631_RS10555;Name=LU631_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10555;old_locus_tag=LU631_10555 NZ_CP089940.1 Protein Homology CDS 2003673 2004095 . + 0 ID=cds-WP_016191996.1;Parent=gene-LU631_RS10555;Dbxref=Genbank:WP_016191996.1;Name=WP_016191996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120399.1;locus_tag=LU631_RS10555;product=hypothetical protein;protein_id=WP_016191996.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2004253 2004414 . + . ID=gene-LU631_RS10560;Name=LU631_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10560;old_locus_tag=LU631_10560 NZ_CP089940.1 GeneMarkS-2+ CDS 2004253 2004414 . + 0 ID=cds-WP_198292536.1;Parent=gene-LU631_RS10560;Dbxref=Genbank:WP_198292536.1;Name=WP_198292536.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS10560;product=hypothetical protein;protein_id=WP_198292536.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2004527 2005294 . + . ID=gene-LU631_RS10565;Name=LU631_RS10565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10565;old_locus_tag=LU631_10565;pseudo=true NZ_CP089940.1 Protein Homology CDS 2004527 2005294 . + 0 ID=cds-LU631_RS10565;Parent=gene-LU631_RS10565;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595405.1;locus_tag=LU631_RS10565;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2005282 2005605 . + . ID=gene-LU631_RS10570;Name=LU631_RS10570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10570;old_locus_tag=LU631_10570;partial=true;pseudo=true;start_range=.,2005282 NZ_CP089940.1 Protein Homology CDS 2005282 2005605 . + 0 ID=cds-LU631_RS10570;Parent=gene-LU631_RS10570;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000544830.1;locus_tag=LU631_RS10570;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,2005282;transl_table=11 NZ_CP089940.1 RefSeq gene 2005866 2006906 . + . ID=gene-LU631_RS10575;Name=LU631_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10575;old_locus_tag=LU631_10575 NZ_CP089940.1 Protein Homology CDS 2005866 2006906 . + 0 ID=cds-WP_046371818.1-3;Parent=gene-LU631_RS10575;Dbxref=Genbank:WP_046371818.1;Name=WP_046371818.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS10575;product=IS481 family transposase;protein_id=WP_046371818.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2006997 2008236 . + . ID=gene-LU631_RS10580;Name=LU631_RS10580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10580;old_locus_tag=LU631_10580;pseudo=true NZ_CP089940.1 Protein Homology CDS 2006997 2008236 . + 0 ID=cds-LU631_RS10580;Parent=gene-LU631_RS10580;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025244073.1;locus_tag=LU631_RS10580;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2008248 2009456 . - . ID=gene-LU631_RS10585;Name=LU631_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10585;old_locus_tag=LU631_10585 NZ_CP089940.1 Protein Homology CDS 2008248 2009456 . - 0 ID=cds-WP_046371820.1;Parent=gene-LU631_RS10585;Dbxref=Genbank:WP_046371820.1;Name=WP_046371820.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS10585;product=IS256 family transposase;protein_id=WP_046371820.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2009701 2009949 . - . ID=gene-LU631_RS10590;Name=LU631_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10590;old_locus_tag=LU631_10590 NZ_CP089940.1 Protein Homology CDS 2009701 2009949 . - 0 ID=cds-WP_072052782.1;Parent=gene-LU631_RS10590;Dbxref=Genbank:WP_072052782.1;Name=WP_072052782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500389.1;locus_tag=LU631_RS10590;product=ogr/Delta-like zinc finger family protein;protein_id=WP_072052782.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2009988 2011124 . - . ID=gene-LU631_RS10595;Name=LU631_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10595;old_locus_tag=LU631_10595 NZ_CP089940.1 Protein Homology CDS 2009988 2011124 . - 0 ID=cds-WP_046371821.1;Parent=gene-LU631_RS10595;Dbxref=Genbank:WP_046371821.1;Name=WP_046371821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117906.1;locus_tag=LU631_RS10595;product=phage late control D family protein;protein_id=WP_046371821.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2011275 2012456 . + . ID=gene-LU631_RS10600;Name=LU631_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10600;old_locus_tag=LU631_10600 NZ_CP089940.1 Protein Homology CDS 2011275 2012456 . + 0 ID=cds-WP_046371822.1;Parent=gene-LU631_RS10600;Dbxref=Genbank:WP_046371822.1;Name=WP_046371822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094145.1;locus_tag=LU631_RS10600;product=phage tail sheath family protein;protein_id=WP_046371822.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2012457 2012972 . + . ID=gene-LU631_RS10605;Name=LU631_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10605;old_locus_tag=LU631_10605 NZ_CP089940.1 Protein Homology CDS 2012457 2012972 . + 0 ID=cds-WP_006117904.1;Parent=gene-LU631_RS10605;Dbxref=Genbank:WP_006117904.1;Name=WP_006117904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009486472.1;locus_tag=LU631_RS10605;product=phage major tail tube protein;protein_id=WP_006117904.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2013021 2013338 . + . ID=gene-LU631_RS10610;Name=LU631_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10610;old_locus_tag=LU631_10610 NZ_CP089940.1 Protein Homology CDS 2013021 2013338 . + 0 ID=cds-WP_046371823.1;Parent=gene-LU631_RS10610;Dbxref=Genbank:WP_046371823.1;Name=WP_046371823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072463.1;locus_tag=LU631_RS10610;product=phage tail assembly protein;protein_id=WP_046371823.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2013344 2013499 . + . ID=gene-LU631_RS10615;Name=LU631_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10615;old_locus_tag=LU631_10615 NZ_CP089940.1 Protein Homology CDS 2013344 2013499 . + 0 ID=cds-WP_072052787.1;Parent=gene-LU631_RS10615;Dbxref=Genbank:WP_072052787.1;Name=WP_072052787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016940976.1;locus_tag=LU631_RS10615;product=GpE family phage tail protein;protein_id=WP_072052787.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2013486 2016458 . + . ID=gene-LU631_RS10620;Name=LU631_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10620;old_locus_tag=LU631_10620 NZ_CP089940.1 Protein Homology CDS 2013486 2016458 . + 0 ID=cds-WP_046371840.1;Parent=gene-LU631_RS10620;Dbxref=Genbank:WP_046371840.1;Name=WP_046371840.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072464.1;locus_tag=LU631_RS10620;product=phage tail tape measure protein;protein_id=WP_046371840.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2016471 2016959 . + . ID=gene-LU631_RS10625;Name=LU631_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10625;old_locus_tag=LU631_10625 NZ_CP089940.1 Protein Homology CDS 2016471 2016959 . + 0 ID=cds-WP_016193199.1;Parent=gene-LU631_RS10625;Dbxref=Genbank:WP_016193199.1;Name=WP_016193199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001761054.1;locus_tag=LU631_RS10625;product=phage tail protein;protein_id=WP_016193199.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2017114 2017709 . - . ID=gene-LU631_RS10630;Name=LU631_RS10630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10630;old_locus_tag=LU631_10630;pseudo=true NZ_CP089940.1 Protein Homology CDS 2017114 2017709 . - 0 ID=cds-LU631_RS10630;Parent=gene-LU631_RS10630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243405.1;locus_tag=LU631_RS10630;product=tail fiber assembly protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2017709 2018710 . - . ID=gene-LU631_RS10635;Name=LU631_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10635;old_locus_tag=LU631_10635 NZ_CP089940.1 Protein Homology CDS 2017709 2018710 . - 0 ID=cds-WP_016193201.1;Parent=gene-LU631_RS10635;Dbxref=Genbank:WP_016193201.1;Name=WP_016193201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001580935.1;locus_tag=LU631_RS10635;product=phage tail protein;protein_id=WP_016193201.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2018700 2019314 . - . ID=gene-LU631_RS10640;Name=LU631_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10640;old_locus_tag=LU631_10640 NZ_CP089940.1 Protein Homology CDS 2018700 2019314 . - 0 ID=cds-WP_016193202.1;Parent=gene-LU631_RS10640;Dbxref=Genbank:WP_016193202.1;Name=WP_016193202.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001063585.1;locus_tag=LU631_RS10640;product=phage tail protein I;protein_id=WP_016193202.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2019307 2020203 . - . ID=gene-LU631_RS10645;Name=LU631_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10645;old_locus_tag=LU631_10645 NZ_CP089940.1 Protein Homology CDS 2019307 2020203 . - 0 ID=cds-WP_016193203.1;Parent=gene-LU631_RS10645;Dbxref=Genbank:WP_016193203.1;Name=WP_016193203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117898.1;locus_tag=LU631_RS10645;product=baseplate J/gp47 family protein;protein_id=WP_016193203.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2020190 2020558 . - . ID=gene-LU631_RS10650;Name=LU631_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10650;old_locus_tag=LU631_10650 NZ_CP089940.1 Protein Homology CDS 2020190 2020558 . - 0 ID=cds-WP_016193204.1;Parent=gene-LU631_RS10650;Dbxref=Genbank:WP_016193204.1;Name=WP_016193204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016940969.1;locus_tag=LU631_RS10650;product=GPW/gp25 family protein;protein_id=WP_016193204.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2020555 2021130 . - . ID=gene-LU631_RS10655;Name=LU631_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10655;old_locus_tag=LU631_10655 NZ_CP089940.1 Protein Homology CDS 2020555 2021130 . - 0 ID=cds-WP_016193205.1;Parent=gene-LU631_RS10655;Dbxref=Genbank:WP_016193205.1;Name=WP_016193205.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072471.1;locus_tag=LU631_RS10655;product=phage baseplate assembly protein V;protein_id=WP_016193205.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2021127 2021765 . - . ID=gene-LU631_RS10660;Name=LU631_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10660;old_locus_tag=LU631_10660 NZ_CP089940.1 Protein Homology CDS 2021127 2021765 . - 0 ID=cds-WP_016193206.1;Parent=gene-LU631_RS10660;Dbxref=Genbank:WP_016193206.1;Name=WP_016193206.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117895.1;locus_tag=LU631_RS10660;product=phage virion morphogenesis protein;protein_id=WP_016193206.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2021762 2022223 . - . ID=gene-LU631_RS10665;Name=LU631_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10665;old_locus_tag=LU631_10665 NZ_CP089940.1 Protein Homology CDS 2021762 2022223 . - 0 ID=cds-WP_016193207.1;Parent=gene-LU631_RS10665;Dbxref=Genbank:WP_016193207.1;Name=WP_016193207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019843881.1;locus_tag=LU631_RS10665;product=phage tail protein;protein_id=WP_016193207.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2022228 2022743 . - . ID=gene-LU631_RS10670;Name=LU631_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10670;old_locus_tag=LU631_10670 NZ_CP089940.1 Protein Homology CDS 2022228 2022743 . - 0 ID=cds-WP_016193208.1;Parent=gene-LU631_RS10670;Dbxref=Genbank:WP_016193208.1;Name=WP_016193208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246755.1;locus_tag=LU631_RS10670;product=DUF2514 family protein;protein_id=WP_016193208.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2022740 2023285 . - . ID=gene-LU631_RS10675;Name=LU631_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10675;old_locus_tag=LU631_10675 NZ_CP089940.1 Protein Homology CDS 2022740 2023285 . - 0 ID=cds-WP_016193209.1;Parent=gene-LU631_RS10675;Dbxref=Genbank:WP_016193209.1;Name=WP_016193209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114933.1;locus_tag=LU631_RS10675;product=lysozyme;protein_id=WP_016193209.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2023269 2023571 . - . ID=gene-LU631_RS10680;Name=LU631_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10680;old_locus_tag=LU631_10680 NZ_CP089940.1 Protein Homology CDS 2023269 2023571 . - 0 ID=cds-WP_016193210.1;Parent=gene-LU631_RS10680;Dbxref=Genbank:WP_016193210.1;Name=WP_016193210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003835852.1;locus_tag=LU631_RS10680;product=hypothetical protein;protein_id=WP_016193210.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2023562 2023762 . - . ID=gene-LU631_RS10685;Name=LU631_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10685;old_locus_tag=LU631_10685 NZ_CP089940.1 Protein Homology CDS 2023562 2023762 . - 0 ID=cds-WP_016193211.1;Parent=gene-LU631_RS10685;Dbxref=Genbank:WP_016193211.1;Name=WP_016193211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537159.1;locus_tag=LU631_RS10685;product=tail protein X;protein_id=WP_016193211.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2023762 2024286 . - . ID=gene-LU631_RS10690;Name=LU631_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10690;old_locus_tag=LU631_10690 NZ_CP089940.1 Protein Homology CDS 2023762 2024286 . - 0 ID=cds-WP_016193212.1;Parent=gene-LU631_RS10690;Dbxref=Genbank:WP_016193212.1;Name=WP_016193212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193212.1;locus_tag=LU631_RS10690;product=head completion/stabilization protein;protein_id=WP_016193212.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2024383 2025240 . - . ID=gene-LU631_RS10695;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=LU631_RS10695;old_locus_tag=LU631_10695 NZ_CP089940.1 Protein Homology CDS 2024383 2025240 . - 0 ID=cds-WP_040465938.1;Parent=gene-LU631_RS10695;Dbxref=Genbank:WP_040465938.1;Name=WP_040465938.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072479.1;locus_tag=LU631_RS10695;product=phage terminase small subunit;protein_id=WP_040465938.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2025265 2026314 . - . ID=gene-LU631_RS10700;Name=LU631_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10700;old_locus_tag=LU631_10700 NZ_CP089940.1 Protein Homology CDS 2025265 2026314 . - 0 ID=cds-WP_016193214.1;Parent=gene-LU631_RS10700;Dbxref=Genbank:WP_016193214.1;Name=WP_016193214.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193214.1;locus_tag=LU631_RS10700;product=phage major capsid protein%2C P2 family;protein_id=WP_016193214.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2026338 2027174 . - . ID=gene-LU631_RS10705;Name=LU631_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10705;old_locus_tag=LU631_10705 NZ_CP089940.1 Protein Homology CDS 2026338 2027174 . - 0 ID=cds-WP_016193215.1;Parent=gene-LU631_RS10705;Dbxref=Genbank:WP_016193215.1;Name=WP_016193215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500366.1;locus_tag=LU631_RS10705;product=GPO family capsid scaffolding protein;protein_id=WP_016193215.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2027334 2029064 . + . ID=gene-LU631_RS10710;Name=LU631_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10710;old_locus_tag=LU631_10710 NZ_CP089940.1 Protein Homology CDS 2027334 2029064 . + 0 ID=cds-WP_040465939.1;Parent=gene-LU631_RS10710;Dbxref=Genbank:WP_040465939.1;Name=WP_040465939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855478.1;locus_tag=LU631_RS10710;product=terminase family protein;protein_id=WP_040465939.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2029064 2030122 . + . ID=gene-LU631_RS10715;Name=LU631_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10715;old_locus_tag=LU631_10715 NZ_CP089940.1 Protein Homology CDS 2029064 2030122 . + 0 ID=cds-WP_016193218.1;Parent=gene-LU631_RS10715;Dbxref=Genbank:WP_016193218.1;Name=WP_016193218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072483.1;locus_tag=LU631_RS10715;product=phage portal protein;protein_id=WP_016193218.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2030193 2030696 . - . ID=gene-LU631_RS10720;Name=LU631_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10720;old_locus_tag=LU631_10720 NZ_CP089940.1 GeneMarkS-2+ CDS 2030193 2030696 . - 0 ID=cds-WP_016193219.1;Parent=gene-LU631_RS10720;Dbxref=Genbank:WP_016193219.1;Name=WP_016193219.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS10720;product=hypothetical protein;protein_id=WP_016193219.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2031139 2031519 . - . ID=gene-LU631_RS10725;Name=LU631_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10725;old_locus_tag=LU631_10725 NZ_CP089940.1 Protein Homology CDS 2031139 2031519 . - 0 ID=cds-WP_046372029.1;Parent=gene-LU631_RS10725;Dbxref=Genbank:WP_046372029.1;Name=WP_046372029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000598767.1;locus_tag=LU631_RS10725;product=type II toxin-antitoxin system YafO family toxin;protein_id=WP_046372029.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2031529 2032122 . - . ID=gene-LU631_RS10730;Name=LU631_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10730;old_locus_tag=LU631_10730 NZ_CP089940.1 Protein Homology CDS 2031529 2032122 . - 0 ID=cds-WP_046372030.1;Parent=gene-LU631_RS10730;Dbxref=Genbank:WP_046372030.1;Name=WP_046372030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000095653.1;locus_tag=LU631_RS10730;product=hypothetical protein;protein_id=WP_046372030.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2032162 2032302 . + . ID=gene-LU631_RS10735;Name=LU631_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10735;old_locus_tag=LU631_10735 NZ_CP089940.1 GeneMarkS-2+ CDS 2032162 2032302 . + 0 ID=cds-WP_161796982.1;Parent=gene-LU631_RS10735;Dbxref=Genbank:WP_161796982.1;Name=WP_161796982.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS10735;product=hypothetical protein;protein_id=WP_161796982.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2032387 2032746 . - . ID=gene-LU631_RS10740;Name=LU631_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10740;old_locus_tag=LU631_10740 NZ_CP089940.1 Protein Homology CDS 2032387 2032746 . - 0 ID=cds-WP_046371849.1;Parent=gene-LU631_RS10740;Dbxref=Genbank:WP_046371849.1;Name=WP_046371849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181489.1;locus_tag=LU631_RS10740;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_046371849.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2032766 2033032 . - . ID=gene-LU631_RS10745;Name=LU631_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10745;old_locus_tag=LU631_10745 NZ_CP089940.1 GeneMarkS-2+ CDS 2032766 2033032 . - 0 ID=cds-WP_046371850.1;Parent=gene-LU631_RS10745;Dbxref=Genbank:WP_046371850.1;Name=WP_046371850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS10745;product=hypothetical protein;protein_id=WP_046371850.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2032998 2035493 . - . ID=gene-LU631_RS10750;Name=LU631_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10750;old_locus_tag=LU631_10750 NZ_CP089940.1 Protein Homology CDS 2032998 2035493 . - 0 ID=cds-WP_052734706.1;Parent=gene-LU631_RS10750;Dbxref=Genbank:WP_052734706.1;Name=WP_052734706.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015871545.1;locus_tag=LU631_RS10750;product=replication endonuclease;protein_id=WP_052734706.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2035493 2035876 . - . ID=gene-LU631_RS10755;Name=LU631_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10755;old_locus_tag=LU631_10755 NZ_CP089940.1 GeneMarkS-2+ CDS 2035493 2035876 . - 0 ID=cds-WP_016193222.1;Parent=gene-LU631_RS10755;Dbxref=Genbank:WP_016193222.1;Name=WP_016193222.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS10755;product=hypothetical protein;protein_id=WP_016193222.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2035949 2036191 . - . ID=gene-LU631_RS10760;Name=LU631_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10760;old_locus_tag=LU631_10760 NZ_CP089940.1 GeneMarkS-2+ CDS 2035949 2036191 . - 0 ID=cds-WP_016193223.1;Parent=gene-LU631_RS10760;Dbxref=Genbank:WP_016193223.1;Name=WP_016193223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS10760;product=hypothetical protein;protein_id=WP_016193223.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2036239 2036505 . - . ID=gene-LU631_RS10765;Name=LU631_RS10765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10765;old_locus_tag=LU631_10765;partial=true;pseudo=true;start_range=.,2036239 NZ_CP089940.1 Protein Homology CDS 2036239 2036505 . - 0 ID=cds-LU631_RS10765;Parent=gene-LU631_RS10765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022029.2;locus_tag=LU631_RS10765;partial=true;product=ash family protein;pseudo=true;start_range=.,2036239;transl_table=11 NZ_CP089940.1 RefSeq gene 2036523 2036729 . - . ID=gene-LU631_RS10770;Name=LU631_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10770;old_locus_tag=LU631_10770 NZ_CP089940.1 GeneMarkS-2+ CDS 2036523 2036729 . - 0 ID=cds-WP_016193242.1;Parent=gene-LU631_RS10770;Dbxref=Genbank:WP_016193242.1;Name=WP_016193242.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS10770;product=hypothetical protein;protein_id=WP_016193242.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2036726 2037568 . - . ID=gene-LU631_RS10775;Name=LU631_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10775;old_locus_tag=LU631_10775 NZ_CP089940.1 Protein Homology CDS 2036726 2037568 . - 0 ID=cds-WP_016193243.1;Parent=gene-LU631_RS10775;Dbxref=Genbank:WP_016193243.1;Name=WP_016193243.1;Ontology_term=GO:0006306,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117877.1;locus_tag=LU631_RS10775;product=Dam family site-specific DNA-(adenine-N6)-methyltransferase;protein_id=WP_016193243.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2037565 2038137 . - . ID=gene-LU631_RS10780;Name=LU631_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10780;old_locus_tag=LU631_10780 NZ_CP089940.1 Protein Homology CDS 2037565 2038137 . - 0 ID=cds-WP_016193244.1;Parent=gene-LU631_RS10780;Dbxref=Genbank:WP_016193244.1;Name=WP_016193244.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027788.2;locus_tag=LU631_RS10780;product=3'-5' exonuclease;protein_id=WP_016193244.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2038207 2038599 . - . ID=gene-LU631_RS10785;Name=LU631_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10785;old_locus_tag=LU631_10785 NZ_CP089940.1 Protein Homology CDS 2038207 2038599 . - 0 ID=cds-WP_040465952.1;Parent=gene-LU631_RS10785;Dbxref=Genbank:WP_040465952.1;Name=WP_040465952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001514713.1;locus_tag=LU631_RS10785;product=hypothetical protein;protein_id=WP_040465952.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2038769 2039005 . - . ID=gene-LU631_RS10790;Name=LU631_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10790;old_locus_tag=LU631_10790 NZ_CP089940.1 GeneMarkS-2+ CDS 2038769 2039005 . - 0 ID=cds-WP_040465953.1;Parent=gene-LU631_RS10790;Dbxref=Genbank:WP_040465953.1;Name=WP_040465953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS10790;product=hypothetical protein;protein_id=WP_040465953.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2039343 2039582 . - . ID=gene-LU631_RS10795;Name=LU631_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10795;old_locus_tag=LU631_10795 NZ_CP089940.1 Protein Homology CDS 2039343 2039582 . - 0 ID=cds-WP_016193245.1;Parent=gene-LU631_RS10795;Dbxref=Genbank:WP_016193245.1;Name=WP_016193245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201494.1;locus_tag=LU631_RS10795;product=hypothetical protein;protein_id=WP_016193245.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2039551 2039733 . - . ID=gene-LU631_RS10800;Name=LU631_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10800;old_locus_tag=LU631_10800 NZ_CP089940.1 GeneMarkS-2+ CDS 2039551 2039733 . - 0 ID=cds-WP_046371852.1;Parent=gene-LU631_RS10800;Dbxref=Genbank:WP_046371852.1;Name=WP_046371852.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS10800;product=hypothetical protein;protein_id=WP_046371852.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2039711 2039968 . - . ID=gene-LU631_RS10805;Name=LU631_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10805;old_locus_tag=LU631_10805 NZ_CP089940.1 Protein Homology CDS 2039711 2039968 . - 0 ID=cds-WP_016193247.1;Parent=gene-LU631_RS10805;Dbxref=Genbank:WP_016193247.1;Name=WP_016193247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003835823.1;locus_tag=LU631_RS10805;product=hypothetical protein;protein_id=WP_016193247.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2039965 2040396 . - . ID=gene-LU631_RS10810;Name=LU631_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10810;old_locus_tag=LU631_10810 NZ_CP089940.1 GeneMarkS-2+ CDS 2039965 2040396 . - 0 ID=cds-WP_233481908.1;Parent=gene-LU631_RS10810;Dbxref=Genbank:WP_233481908.1;Name=WP_233481908.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS10810;product=hypothetical protein;protein_id=WP_233481908.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2040503 2040784 . + . ID=gene-LU631_RS10815;Name=LU631_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10815;old_locus_tag=LU631_10815 NZ_CP089940.1 Protein Homology CDS 2040503 2040784 . + 0 ID=cds-WP_152664304.1;Parent=gene-LU631_RS10815;Dbxref=Genbank:WP_152664304.1;Name=WP_152664304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815649.1;locus_tag=LU631_RS10815;product=helix-turn-helix transcriptional regulator;protein_id=WP_152664304.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2040869 2041905 . + . ID=gene-LU631_RS10820;Name=LU631_RS10820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10820;old_locus_tag=LU631_10820;pseudo=true NZ_CP089940.1 Protein Homology CDS 2040869 2041905 . + 0 ID=cds-LU631_RS10820;Parent=gene-LU631_RS10820;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017371518.1;locus_tag=LU631_RS10820;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2042020 2042610 . - . ID=gene-LU631_RS10825;Name=LU631_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10825;old_locus_tag=LU631_10825 NZ_CP089940.1 Protein Homology CDS 2042020 2042610 . - 0 ID=cds-WP_040465922.1;Parent=gene-LU631_RS10825;Dbxref=Genbank:WP_040465922.1;Name=WP_040465922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091220.1;locus_tag=LU631_RS10825;product=DJ-1/PfpI family protein;protein_id=WP_040465922.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2042820 2043899 . + . ID=gene-LU631_RS10830;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=LU631_RS10830;old_locus_tag=LU631_10830 NZ_CP089940.1 Protein Homology CDS 2042820 2043899 . + 0 ID=cds-WP_016193114.1;Parent=gene-LU631_RS10830;Dbxref=Genbank:WP_016193114.1;Name=WP_016193114.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168789.1;locus_tag=LU631_RS10830;product=lytic murein transglycosylase B;protein_id=WP_016193114.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2044570 2045064 . + . ID=gene-LU631_RS10835;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=LU631_RS10835;old_locus_tag=LU631_10835 NZ_CP089940.1 Protein Homology CDS 2044570 2045064 . + 0 ID=cds-WP_016193113.1;Parent=gene-LU631_RS10835;Dbxref=Genbank:WP_016193113.1;Name=WP_016193113.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007370557.1;locus_tag=LU631_RS10835;product=nicotinamide-nucleotide amidase;protein_id=WP_016193113.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2045160 2046227 . + . ID=gene-LU631_RS10840;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=LU631_RS10840;old_locus_tag=LU631_10840 NZ_CP089940.1 Protein Homology CDS 2045160 2046227 . + 0 ID=cds-WP_016193112.1;Parent=gene-LU631_RS10840;Dbxref=Genbank:WP_016193112.1;Name=WP_016193112.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444432.1;locus_tag=LU631_RS10840;product=recombinase RecA;protein_id=WP_016193112.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2046363 2046869 . + . ID=gene-LU631_RS10845;Name=LU631_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10845;old_locus_tag=LU631_10845 NZ_CP089940.1 Protein Homology CDS 2046363 2046869 . + 0 ID=cds-WP_016193111.1;Parent=gene-LU631_RS10845;Dbxref=Genbank:WP_016193111.1;Name=WP_016193111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669035.1;locus_tag=LU631_RS10845;product=regulatory protein RecX;protein_id=WP_016193111.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2047008 2049635 . + . ID=gene-LU631_RS10850;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=LU631_RS10850;old_locus_tag=LU631_10850 NZ_CP089940.1 Protein Homology CDS 2047008 2049635 . + 0 ID=cds-WP_016193110.1;Parent=gene-LU631_RS10850;Dbxref=Genbank:WP_016193110.1;Name=WP_016193110.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228400.1;locus_tag=LU631_RS10850;product=alanine--tRNA ligase;protein_id=WP_016193110.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2049885 2050070 . + . ID=gene-LU631_RS10855;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=LU631_RS10855;old_locus_tag=LU631_10855 NZ_CP089940.1 Protein Homology CDS 2049885 2050070 . + 0 ID=cds-WP_016193109.1;Parent=gene-LU631_RS10855;Dbxref=Genbank:WP_016193109.1;Name=WP_016193109.1;Ontology_term=GO:0006109,GO:0006402,GO:0003723;gbkey=CDS;gene=csrA;go_function=RNA binding|0003723||IEA;go_process=regulation of carbohydrate metabolic process|0006109||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155916.1;locus_tag=LU631_RS10855;product=carbon storage regulator CsrA;protein_id=WP_016193109.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2050377 2050469 . + . ID=gene-LU631_RS10860;Name=LU631_RS10860;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS10860;old_locus_tag=LU631_10860 NZ_CP089940.1 tRNAscan-SE tRNA 2050377 2050469 . + . ID=rna-LU631_RS10860;Parent=gene-LU631_RS10860;anticodon=(pos:2050411..2050413);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10860;product=tRNA-Ser NZ_CP089940.1 tRNAscan-SE exon 2050377 2050469 . + . ID=exon-LU631_RS10860-1;Parent=rna-LU631_RS10860;anticodon=(pos:2050411..2050413);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10860;product=tRNA-Ser NZ_CP089940.1 RefSeq gene 2050473 2050549 . + . ID=gene-LU631_RS10865;Name=LU631_RS10865;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS10865;old_locus_tag=LU631_10865 NZ_CP089940.1 tRNAscan-SE tRNA 2050473 2050549 . + . ID=rna-LU631_RS10865;Parent=gene-LU631_RS10865;anticodon=(pos:2050507..2050509);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10865;product=tRNA-Arg NZ_CP089940.1 tRNAscan-SE exon 2050473 2050549 . + . ID=exon-LU631_RS10865-1;Parent=rna-LU631_RS10865;anticodon=(pos:2050507..2050509);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10865;product=tRNA-Arg NZ_CP089940.1 RefSeq gene 2050655 2050731 . + . ID=gene-LU631_RS10870;Name=LU631_RS10870;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS10870;old_locus_tag=LU631_10870 NZ_CP089940.1 tRNAscan-SE tRNA 2050655 2050731 . + . ID=rna-LU631_RS10870;Parent=gene-LU631_RS10870;anticodon=(pos:2050689..2050691);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10870;product=tRNA-Arg NZ_CP089940.1 tRNAscan-SE exon 2050655 2050731 . + . ID=exon-LU631_RS10870-1;Parent=rna-LU631_RS10870;anticodon=(pos:2050689..2050691);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS10870;product=tRNA-Arg NZ_CP089940.1 RefSeq gene 2050985 2051551 . + . ID=gene-LU631_RS10875;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=LU631_RS10875;old_locus_tag=LU631_10875 NZ_CP089940.1 Protein Homology CDS 2050985 2051551 . + 0 ID=cds-WP_016193108.1;Parent=gene-LU631_RS10875;Dbxref=Genbank:WP_016193108.1;Name=WP_016193108.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278443.1;locus_tag=LU631_RS10875;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_016193108.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2051548 2051976 . + . ID=gene-LU631_RS10880;Name=LU631_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10880;old_locus_tag=LU631_10880 NZ_CP089940.1 Protein Homology CDS 2051548 2051976 . + 0 ID=cds-WP_016193107.1;Parent=gene-LU631_RS10880;Dbxref=Genbank:WP_016193107.1;Name=WP_016193107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594419.1;locus_tag=LU631_RS10880;product=DedA family protein;protein_id=WP_016193107.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2052045 2053604 . + . ID=gene-LU631_RS10885;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=LU631_RS10885;old_locus_tag=LU631_10885 NZ_CP089940.1 Protein Homology CDS 2052045 2053604 . + 0 ID=cds-WP_016193106.1;Parent=gene-LU631_RS10885;Dbxref=Genbank:WP_016193106.1;Name=WP_016193106.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168798.1;locus_tag=LU631_RS10885;product=glutamate--cysteine ligase;protein_id=WP_016193106.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2053755 2054270 . + . ID=gene-LU631_RS10890;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=LU631_RS10890;old_locus_tag=LU631_10890 NZ_CP089940.1 Protein Homology CDS 2053755 2054270 . + 0 ID=cds-WP_016193105.1;Parent=gene-LU631_RS10890;Dbxref=Genbank:WP_016193105.1;Name=WP_016193105.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=LU631_RS10890;product=S-ribosylhomocysteine lyase;protein_id=WP_016193105.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2054329 2055615 . - . ID=gene-LU631_RS10895;Name=LU631_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10895;old_locus_tag=LU631_10895 NZ_CP089940.1 Protein Homology CDS 2054329 2055615 . - 0 ID=cds-WP_040465921.1;Parent=gene-LU631_RS10895;Dbxref=Genbank:WP_040465921.1;Name=WP_040465921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168799.1;locus_tag=LU631_RS10895;product=HlyC/CorC family transporter;protein_id=WP_040465921.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2055641 2056432 . - . ID=gene-LU631_RS10900;Name=LU631_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10900;old_locus_tag=LU631_10900 NZ_CP089940.1 Protein Homology CDS 2055641 2056432 . - 0 ID=cds-WP_016193103.1;Parent=gene-LU631_RS10900;Dbxref=Genbank:WP_016193103.1;Name=WP_016193103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193103.1;locus_tag=LU631_RS10900;product=inner membrane protein YpjD;protein_id=WP_016193103.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2056592 2057953 . + . ID=gene-LU631_RS10905;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=LU631_RS10905;old_locus_tag=LU631_10905 NZ_CP089940.1 Protein Homology CDS 2056592 2057953 . + 0 ID=cds-WP_016193102.1;Parent=gene-LU631_RS10905;Dbxref=Genbank:WP_016193102.1;Name=WP_016193102.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=LU631_RS10905;product=signal recognition particle protein;protein_id=WP_016193102.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2058090 2058338 . + . ID=gene-LU631_RS10910;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=LU631_RS10910;old_locus_tag=LU631_10910 NZ_CP089940.1 Protein Homology CDS 2058090 2058338 . + 0 ID=cds-WP_016193101.1;Parent=gene-LU631_RS10910;Dbxref=Genbank:WP_016193101.1;Name=WP_016193101.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=LU631_RS10910;product=30S ribosomal protein S16;protein_id=WP_016193101.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2058357 2058905 . + . ID=gene-LU631_RS10915;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=LU631_RS10915;old_locus_tag=LU631_10915 NZ_CP089940.1 Protein Homology CDS 2058357 2058905 . + 0 ID=cds-WP_016193100.1;Parent=gene-LU631_RS10915;Dbxref=Genbank:WP_016193100.1;Name=WP_016193100.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=LU631_RS10915;product=ribosome maturation factor RimM;protein_id=WP_016193100.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2058941 2059723 . + . ID=gene-LU631_RS10920;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=LU631_RS10920;old_locus_tag=LU631_10920 NZ_CP089940.1 Protein Homology CDS 2058941 2059723 . + 0 ID=cds-WP_016193099.1;Parent=gene-LU631_RS10920;Dbxref=Genbank:WP_016193099.1;Name=WP_016193099.1;Ontology_term=GO:0006400,GO:0009019;gbkey=CDS;gene=trmD;go_function=tRNA (guanine-N1-)-methyltransferase activity|0009019||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013026893.1;locus_tag=LU631_RS10920;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_016193099.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2059756 2060106 . + . ID=gene-LU631_RS10925;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=LU631_RS10925;old_locus_tag=LU631_10925 NZ_CP089940.1 Protein Homology CDS 2059756 2060106 . + 0 ID=cds-WP_016193098.1;Parent=gene-LU631_RS10925;Dbxref=Genbank:WP_016193098.1;Name=WP_016193098.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193098.1;locus_tag=LU631_RS10925;product=50S ribosomal protein L19;protein_id=WP_016193098.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2060607 2063813 . - . ID=gene-LU631_RS10930;Name=LU631_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10930;old_locus_tag=LU631_10930 NZ_CP089940.1 Protein Homology CDS 2060607 2063813 . - 0 ID=cds-WP_016193097.1;Parent=gene-LU631_RS10930;Dbxref=Genbank:WP_016193097.1;Name=WP_016193097.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021945.2;locus_tag=LU631_RS10930;product=M66 family metalloprotease;protein_id=WP_016193097.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2064179 2064463 . - . ID=gene-LU631_RS10935;Name=LU631_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10935;old_locus_tag=LU631_10935 NZ_CP089940.1 GeneMarkS-2+ CDS 2064179 2064463 . - 0 ID=cds-WP_016193096.1;Parent=gene-LU631_RS10935;Dbxref=Genbank:WP_016193096.1;Name=WP_016193096.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS10935;product=hypothetical protein;protein_id=WP_016193096.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2065135 2066214 . + . ID=gene-LU631_RS10940;Name=LU631_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10940;old_locus_tag=LU631_10940 NZ_CP089940.1 Protein Homology CDS 2065135 2066214 . + 0 ID=cds-WP_016193095.1;Parent=gene-LU631_RS10940;Dbxref=Genbank:WP_016193095.1;Name=WP_016193095.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172124.1;locus_tag=LU631_RS10940;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_016193095.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2066217 2067338 . + . ID=gene-LU631_RS10945;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=LU631_RS10945;old_locus_tag=LU631_10945 NZ_CP089940.1 Protein Homology CDS 2066217 2067338 . + 0 ID=cds-WP_016193094.1;Parent=gene-LU631_RS10945;Dbxref=Genbank:WP_016193094.1;Name=WP_016193094.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311490.1;locus_tag=LU631_RS10945;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_016193094.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2067467 2068789 . - . ID=gene-LU631_RS10950;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=LU631_RS10950;old_locus_tag=LU631_10950 NZ_CP089940.1 Protein Homology CDS 2067467 2068789 . - 0 ID=cds-WP_016193093.1;Parent=gene-LU631_RS10950;Dbxref=Genbank:WP_016193093.1;Name=WP_016193093.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159206.1;locus_tag=LU631_RS10950;product=ATP-dependent RNA helicase SrmB;protein_id=WP_016193093.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2068921 2069658 . + . ID=gene-LU631_RS10955;Name=LU631_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10955;old_locus_tag=LU631_10955 NZ_CP089940.1 Protein Homology CDS 2068921 2069658 . + 0 ID=cds-WP_016193092.1;Parent=gene-LU631_RS10955;Dbxref=Genbank:WP_016193092.1;Name=WP_016193092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803134.1;locus_tag=LU631_RS10955;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_016193092.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2069659 2071269 . - . ID=gene-LU631_RS10960;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=pseudogene;locus_tag=LU631_RS10960;old_locus_tag=LU631_10960;pseudo=true NZ_CP089940.1 Protein Homology CDS 2069659 2071269 . - 0 ID=cds-LU631_RS10960;Parent=gene-LU631_RS10960;Note=frameshifted%3B internal stop;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853280.1;locus_tag=LU631_RS10960;product=L-aspartate oxidase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2071729 2072304 . + . ID=gene-LU631_RS10965;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=LU631_RS10965;old_locus_tag=LU631_10965 NZ_CP089940.1 Protein Homology CDS 2071729 2072304 . + 0 ID=cds-WP_016193088.1;Parent=gene-LU631_RS10965;Dbxref=Genbank:WP_016193088.1;Name=WP_016193088.1;Ontology_term=GO:0006352,GO:0006979,GO:0016987,GO:0005737;gbkey=CDS;gene=rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=LU631_RS10965;product=RNA polymerase sigma factor RpoE;protein_id=WP_016193088.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2072335 2072985 . + . ID=gene-LU631_RS10970;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=LU631_RS10970;old_locus_tag=LU631_10970 NZ_CP089940.1 Protein Homology CDS 2072335 2072985 . + 0 ID=cds-WP_016193087.1;Parent=gene-LU631_RS10970;Dbxref=Genbank:WP_016193087.1;Name=WP_016193087.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014728272.1;locus_tag=LU631_RS10970;product=anti-sigma-E factor RseA;protein_id=WP_016193087.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2072985 2073938 . + . ID=gene-LU631_RS10975;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=LU631_RS10975;old_locus_tag=LU631_10975 NZ_CP089940.1 Protein Homology CDS 2072985 2073938 . + 0 ID=cds-WP_016193086.1;Parent=gene-LU631_RS10975;Dbxref=Genbank:WP_016193086.1;Name=WP_016193086.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159200.1;locus_tag=LU631_RS10975;product=sigma-E factor regulatory protein RseB;protein_id=WP_016193086.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2073935 2074393 . + . ID=gene-LU631_RS10980;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=LU631_RS10980;old_locus_tag=LU631_10980 NZ_CP089940.1 Protein Homology CDS 2073935 2074393 . + 0 ID=cds-WP_016193085.1;Parent=gene-LU631_RS10980;Dbxref=Genbank:WP_016193085.1;Name=WP_016193085.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803139.1;locus_tag=LU631_RS10980;product=SoxR-reducing system protein RseC;protein_id=WP_016193085.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2074533 2075229 . + . ID=gene-LU631_RS10985;Name=LU631_RS10985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS10985;old_locus_tag=LU631_10985;pseudo=true NZ_CP089940.1 Protein Homology CDS 2074533 2075229 . + 0 ID=cds-LU631_RS10985;Parent=gene-LU631_RS10985;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=LU631_RS10985;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2075460 2076470 . + . ID=gene-LU631_RS10990;Name=LU631_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS10990;old_locus_tag=LU631_10990 NZ_CP089940.1 Protein Homology CDS 2075460 2076470 . + 0 ID=cds-WP_046372373.1;Parent=gene-LU631_RS10990;Dbxref=Genbank:WP_046372373.1;Name=WP_046372373.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487120.1;locus_tag=LU631_RS10990;product=IS110 family transposase;protein_id=WP_046372373.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2076873 2078672 . + . ID=gene-LU631_RS10995;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=LU631_RS10995;old_locus_tag=LU631_10995 NZ_CP089940.1 Protein Homology CDS 2076873 2078672 . + 0 ID=cds-WP_016193082.1;Parent=gene-LU631_RS10995;Dbxref=Genbank:WP_016193082.1;Name=WP_016193082.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311462.1;locus_tag=LU631_RS10995;product=translation elongation factor 4;protein_id=WP_016193082.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2078699 2079661 . + . ID=gene-LU631_RS11000;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=LU631_RS11000;old_locus_tag=LU631_11000 NZ_CP089940.1 Protein Homology CDS 2078699 2079661 . + 0 ID=cds-WP_016193081.1;Parent=gene-LU631_RS11000;Dbxref=Genbank:WP_016193081.1;Name=WP_016193081.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440738.1;locus_tag=LU631_RS11000;product=signal peptidase I;protein_id=WP_016193081.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2079791 2080471 . + . ID=gene-LU631_RS11005;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=LU631_RS11005;old_locus_tag=LU631_11005 NZ_CP089940.1 Protein Homology CDS 2079791 2080471 . + 0 ID=cds-WP_016193080.1;Parent=gene-LU631_RS11005;Dbxref=Genbank:WP_016193080.1;Name=WP_016193080.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=LU631_RS11005;product=ribonuclease III;protein_id=WP_016193080.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2080468 2081373 . + . ID=gene-LU631_RS11010;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=LU631_RS11010;old_locus_tag=LU631_11010 NZ_CP089940.1 Protein Homology CDS 2080468 2081373 . + 0 ID=cds-WP_016193079.1;Parent=gene-LU631_RS11010;Dbxref=Genbank:WP_016193079.1;Name=WP_016193079.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131214.1;locus_tag=LU631_RS11010;product=GTPase Era;protein_id=WP_016193079.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2081378 2082112 . + . ID=gene-LU631_RS11015;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=LU631_RS11015;old_locus_tag=LU631_11015 NZ_CP089940.1 Protein Homology CDS 2081378 2082112 . + 0 ID=cds-WP_016193078.1;Parent=gene-LU631_RS11015;Dbxref=Genbank:WP_016193078.1;Name=WP_016193078.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803144.1;locus_tag=LU631_RS11015;product=DNA repair protein RecO;protein_id=WP_016193078.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2082184 2082915 . + . ID=gene-LU631_RS11020;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=LU631_RS11020;old_locus_tag=LU631_11020 NZ_CP089940.1 Protein Homology CDS 2082184 2082915 . + 0 ID=cds-WP_016193077.1;Parent=gene-LU631_RS11020;Dbxref=Genbank:WP_016193077.1;Name=WP_016193077.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192826.1;locus_tag=LU631_RS11020;product=pyridoxine 5'-phosphate synthase;protein_id=WP_016193077.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2082915 2083307 . + . ID=gene-LU631_RS11025;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=LU631_RS11025;old_locus_tag=LU631_11025 NZ_CP089940.1 Protein Homology CDS 2082915 2083307 . + 0 ID=cds-WP_016193076.1;Parent=gene-LU631_RS11025;Dbxref=Genbank:WP_016193076.1;Name=WP_016193076.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440743.1;locus_tag=LU631_RS11025;product=holo-ACP synthase;protein_id=WP_016193076.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2083330 2083587 . - . ID=gene-LU631_RS11030;Name=LU631_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11030;old_locus_tag=LU631_11030 NZ_CP089940.1 Protein Homology CDS 2083330 2083587 . - 0 ID=cds-WP_016193075.1;Parent=gene-LU631_RS11030;Dbxref=Genbank:WP_016193075.1;Name=WP_016193075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203423.1;locus_tag=LU631_RS11030;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_016193075.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2083703 2084923 . - . ID=gene-LU631_RS11035;Name=LU631_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11035;old_locus_tag=LU631_11035 NZ_CP089940.1 Protein Homology CDS 2083703 2084923 . - 0 ID=cds-WP_046371929.1-3;Parent=gene-LU631_RS11035;Dbxref=Genbank:WP_046371929.1;Name=WP_046371929.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343765.1;locus_tag=LU631_RS11035;product=ISL3 family transposase;protein_id=WP_046371929.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2084957 2085664 . - . ID=gene-LU631_RS11040;Name=LU631_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11040;old_locus_tag=LU631_11040 NZ_CP089940.1 Protein Homology CDS 2084957 2085664 . - 0 ID=cds-WP_046372137.1-3;Parent=gene-LU631_RS11040;Dbxref=Genbank:WP_046372137.1;Name=WP_046372137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308877.1;locus_tag=LU631_RS11040;product=M91 family zinc metallopeptidase;protein_id=WP_046372137.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2085880 2086437 . + . ID=gene-LU631_RS11045;Name=LU631_RS11045;end_range=2086437,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11045;old_locus_tag=LU631_11045;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2085880 2086437 . + 0 ID=cds-LU631_RS11045;Parent=gene-LU631_RS11045;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2086437,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693020.1;locus_tag=LU631_RS11045;partial=true;product=recombinase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2086604 2087779 . - . ID=gene-LU631_RS11050;Name=LU631_RS11050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11050;old_locus_tag=LU631_11050;pseudo=true NZ_CP089940.1 Protein Homology CDS 2086604 2087779 . - 0 ID=cds-LU631_RS11050;Parent=gene-LU631_RS11050;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558175.1;locus_tag=LU631_RS11050;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2087774 2087947 . - . ID=gene-LU631_RS11055;Name=LU631_RS11055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11055;old_locus_tag=LU631_11055;partial=true;pseudo=true;start_range=.,2087774 NZ_CP089940.1 Protein Homology CDS 2087774 2087947 . - 0 ID=cds-LU631_RS11055;Parent=gene-LU631_RS11055;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707455.1;locus_tag=LU631_RS11055;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2087774;transl_table=11 NZ_CP089940.1 RefSeq gene 2087944 2088795 . - . ID=gene-LU631_RS11060;Name=LU631_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11060;old_locus_tag=LU631_11060 NZ_CP089940.1 Protein Homology CDS 2087944 2088795 . - 0 ID=cds-WP_016193072.1;Parent=gene-LU631_RS11060;Dbxref=Genbank:WP_016193072.1;Name=WP_016193072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667633.1;locus_tag=LU631_RS11060;product=hypothetical protein;protein_id=WP_016193072.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2089469 2090461 . - . ID=gene-LU631_RS11065;Name=LU631_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11065;old_locus_tag=LU631_11065 NZ_CP089940.1 Protein Homology CDS 2089469 2090461 . - 0 ID=cds-WP_046372375.1;Parent=gene-LU631_RS11065;Dbxref=Genbank:WP_046372375.1;Name=WP_046372375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192128.1;locus_tag=LU631_RS11065;product=hypothetical protein;protein_id=WP_046372375.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2090494 2090688 . + . ID=gene-LU631_RS11070;Name=LU631_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11070;old_locus_tag=LU631_11070 NZ_CP089940.1 Protein Homology CDS 2090494 2090688 . + 0 ID=cds-WP_040465919.1;Parent=gene-LU631_RS11070;Dbxref=Genbank:WP_040465919.1;Name=WP_040465919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193071.1;locus_tag=LU631_RS11070;product=hypothetical protein;protein_id=WP_040465919.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2091104 2092114 . - . ID=gene-LU631_RS11075;Name=LU631_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11075;old_locus_tag=LU631_11075 NZ_CP089940.1 Protein Homology CDS 2091104 2092114 . - 0 ID=cds-WP_016193065.1;Parent=gene-LU631_RS11075;Dbxref=Genbank:WP_016193065.1;Name=WP_016193065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667639.1;locus_tag=LU631_RS11075;product=hypothetical protein;protein_id=WP_016193065.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2092222 2093367 . - . ID=gene-LU631_RS11080;Name=LU631_RS11080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11080;old_locus_tag=LU631_11080;pseudo=true NZ_CP089940.1 Protein Homology CDS 2092222 2093367 . - 0 ID=cds-LU631_RS11080;Parent=gene-LU631_RS11080;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612097.1;locus_tag=LU631_RS11080;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2093500 2093667 . + . ID=gene-LU631_RS11085;Name=LU631_RS11085;end_range=2093667,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11085;old_locus_tag=LU631_11085;partial=true;pseudo=true;start_range=.,2093500 NZ_CP089940.1 Protein Homology CDS 2093500 2093667 . + 0 ID=cds-LU631_RS11085;Parent=gene-LU631_RS11085;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2093667,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543659.1;locus_tag=LU631_RS11085;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,2093500;transl_table=11 NZ_CP089940.1 RefSeq gene 2093686 2094165 . - . ID=gene-LU631_RS11090;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=LU631_RS11090;old_locus_tag=LU631_11090 NZ_CP089940.1 Protein Homology CDS 2093686 2094165 . - 0 ID=cds-WP_016193061.1;Parent=gene-LU631_RS11090;Dbxref=Genbank:WP_016193061.1;Name=WP_016193061.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117912.1;locus_tag=LU631_RS11090;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_016193061.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2094830 2095630 . - . ID=gene-LU631_RS11095;Name=LU631_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11095;old_locus_tag=LU631_11095 NZ_CP089940.1 Protein Homology CDS 2094830 2095630 . - 0 ID=cds-WP_016193060.1;Parent=gene-LU631_RS11095;Dbxref=Genbank:WP_016193060.1;Name=WP_016193060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704940.1;locus_tag=LU631_RS11095;product=TraB/GumN family protein;protein_id=WP_016193060.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2095699 2098212 . - . ID=gene-LU631_RS11100;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=LU631_RS11100;old_locus_tag=LU631_11100 NZ_CP089940.1 Protein Homology CDS 2095699 2098212 . - 0 ID=cds-WP_016193059.1;Parent=gene-LU631_RS11100;Dbxref=Genbank:WP_016193059.1;Name=WP_016193059.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled cation transmembrane transporter activity|0019829||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746771.1;locus_tag=LU631_RS11100;product=copper-exporting P-type ATPase CopA;protein_id=WP_016193059.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2098410 2098658 . - . ID=gene-LU631_RS11105;Name=LU631_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11105;old_locus_tag=LU631_11105 NZ_CP089940.1 Protein Homology CDS 2098410 2098658 . - 0 ID=cds-WP_072052782.1-2;Parent=gene-LU631_RS11105;Dbxref=Genbank:WP_072052782.1;Name=WP_072052782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500389.1;locus_tag=LU631_RS11105;product=ogr/Delta-like zinc finger family protein;protein_id=WP_072052782.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2098697 2099833 . - . ID=gene-LU631_RS11110;Name=LU631_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11110;old_locus_tag=LU631_11110 NZ_CP089940.1 Protein Homology CDS 2098697 2099833 . - 0 ID=cds-WP_046371821.1-2;Parent=gene-LU631_RS11110;Dbxref=Genbank:WP_046371821.1;Name=WP_046371821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117906.1;locus_tag=LU631_RS11110;product=phage late control D family protein;protein_id=WP_046371821.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2099984 2101165 . + . ID=gene-LU631_RS11115;Name=LU631_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11115;old_locus_tag=LU631_11115 NZ_CP089940.1 Protein Homology CDS 2099984 2101165 . + 0 ID=cds-WP_046372026.1;Parent=gene-LU631_RS11115;Dbxref=Genbank:WP_046372026.1;Name=WP_046372026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094145.1;locus_tag=LU631_RS11115;product=phage tail sheath family protein;protein_id=WP_046372026.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2101166 2101681 . + . ID=gene-LU631_RS11120;Name=LU631_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11120;old_locus_tag=LU631_11120 NZ_CP089940.1 Protein Homology CDS 2101166 2101681 . + 0 ID=cds-WP_046372027.1;Parent=gene-LU631_RS11120;Dbxref=Genbank:WP_046372027.1;Name=WP_046372027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009486472.1;locus_tag=LU631_RS11120;product=phage major tail tube protein;protein_id=WP_046372027.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2101730 2102047 . + . ID=gene-LU631_RS11125;Name=LU631_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11125;old_locus_tag=LU631_11125 NZ_CP089940.1 Protein Homology CDS 2101730 2102047 . + 0 ID=cds-WP_046372028.1;Parent=gene-LU631_RS11125;Dbxref=Genbank:WP_046372028.1;Name=WP_046372028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072463.1;locus_tag=LU631_RS11125;product=phage tail assembly protein;protein_id=WP_046372028.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2102053 2102208 . + . ID=gene-LU631_RS11130;Name=LU631_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11130;old_locus_tag=LU631_11130 NZ_CP089940.1 Protein Homology CDS 2102053 2102208 . + 0 ID=cds-WP_072052871.1;Parent=gene-LU631_RS11130;Dbxref=Genbank:WP_072052871.1;Name=WP_072052871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016940976.1;locus_tag=LU631_RS11130;product=GpE family phage tail protein;protein_id=WP_072052871.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2102195 2105166 . + . ID=gene-LU631_RS11135;Name=LU631_RS11135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11135;old_locus_tag=LU631_11135;pseudo=true NZ_CP089940.1 Protein Homology CDS 2102195 2105166 . + 0 ID=cds-LU631_RS11135;Parent=gene-LU631_RS11135;Note=frameshifted;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072464.1;locus_tag=LU631_RS11135;product=phage tail tape measure protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2105179 2105667 . + . ID=gene-LU631_RS11140;Name=LU631_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11140;old_locus_tag=LU631_11140 NZ_CP089940.1 Protein Homology CDS 2105179 2105667 . + 0 ID=cds-WP_016193199.1-2;Parent=gene-LU631_RS11140;Dbxref=Genbank:WP_016193199.1;Name=WP_016193199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001761054.1;locus_tag=LU631_RS11140;product=phage tail protein;protein_id=WP_016193199.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2105822 2106418 . - . ID=gene-LU631_RS11145;Name=LU631_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11145;old_locus_tag=LU631_11145 NZ_CP089940.1 Protein Homology CDS 2105822 2106418 . - 0 ID=cds-WP_016193200.1;Parent=gene-LU631_RS11145;Dbxref=Genbank:WP_016193200.1;Name=WP_016193200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243405.1;locus_tag=LU631_RS11145;product=tail fiber assembly protein;protein_id=WP_016193200.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2106418 2107419 . - . ID=gene-LU631_RS11150;Name=LU631_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11150;old_locus_tag=LU631_11150 NZ_CP089940.1 Protein Homology CDS 2106418 2107419 . - 0 ID=cds-WP_016193201.1-2;Parent=gene-LU631_RS11150;Dbxref=Genbank:WP_016193201.1;Name=WP_016193201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001580935.1;locus_tag=LU631_RS11150;product=phage tail protein;protein_id=WP_016193201.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2107409 2108023 . - . ID=gene-LU631_RS11155;Name=LU631_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11155;old_locus_tag=LU631_11155 NZ_CP089940.1 Protein Homology CDS 2107409 2108023 . - 0 ID=cds-WP_016193202.1-2;Parent=gene-LU631_RS11155;Dbxref=Genbank:WP_016193202.1;Name=WP_016193202.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001063585.1;locus_tag=LU631_RS11155;product=phage tail protein I;protein_id=WP_016193202.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2108016 2108912 . - . ID=gene-LU631_RS11160;Name=LU631_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11160;old_locus_tag=LU631_11160 NZ_CP089940.1 Protein Homology CDS 2108016 2108912 . - 0 ID=cds-WP_016193203.1-2;Parent=gene-LU631_RS11160;Dbxref=Genbank:WP_016193203.1;Name=WP_016193203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117898.1;locus_tag=LU631_RS11160;product=baseplate J/gp47 family protein;protein_id=WP_016193203.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2108899 2109267 . - . ID=gene-LU631_RS11165;Name=LU631_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11165;old_locus_tag=LU631_11165 NZ_CP089940.1 Protein Homology CDS 2108899 2109267 . - 0 ID=cds-WP_016193204.1-2;Parent=gene-LU631_RS11165;Dbxref=Genbank:WP_016193204.1;Name=WP_016193204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016940969.1;locus_tag=LU631_RS11165;product=GPW/gp25 family protein;protein_id=WP_016193204.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2109264 2109839 . - . ID=gene-LU631_RS11170;Name=LU631_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11170;old_locus_tag=LU631_11170 NZ_CP089940.1 Protein Homology CDS 2109264 2109839 . - 0 ID=cds-WP_016193205.1-2;Parent=gene-LU631_RS11170;Dbxref=Genbank:WP_016193205.1;Name=WP_016193205.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072471.1;locus_tag=LU631_RS11170;product=phage baseplate assembly protein V;protein_id=WP_016193205.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2109836 2110474 . - . ID=gene-LU631_RS11175;Name=LU631_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11175;old_locus_tag=LU631_11175 NZ_CP089940.1 Protein Homology CDS 2109836 2110474 . - 0 ID=cds-WP_016193206.1-2;Parent=gene-LU631_RS11175;Dbxref=Genbank:WP_016193206.1;Name=WP_016193206.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117895.1;locus_tag=LU631_RS11175;product=phage virion morphogenesis protein;protein_id=WP_016193206.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2110471 2110932 . - . ID=gene-LU631_RS11180;Name=LU631_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11180;old_locus_tag=LU631_11180 NZ_CP089940.1 Protein Homology CDS 2110471 2110932 . - 0 ID=cds-WP_016193207.1-2;Parent=gene-LU631_RS11180;Dbxref=Genbank:WP_016193207.1;Name=WP_016193207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019843881.1;locus_tag=LU631_RS11180;product=phage tail protein;protein_id=WP_016193207.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2110937 2111452 . - . ID=gene-LU631_RS11185;Name=LU631_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11185;old_locus_tag=LU631_11185 NZ_CP089940.1 Protein Homology CDS 2110937 2111452 . - 0 ID=cds-WP_016193208.1-2;Parent=gene-LU631_RS11185;Dbxref=Genbank:WP_016193208.1;Name=WP_016193208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246755.1;locus_tag=LU631_RS11185;product=DUF2514 family protein;protein_id=WP_016193208.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2111449 2111994 . - . ID=gene-LU631_RS11190;Name=LU631_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11190;old_locus_tag=LU631_11190 NZ_CP089940.1 Protein Homology CDS 2111449 2111994 . - 0 ID=cds-WP_016193209.1-2;Parent=gene-LU631_RS11190;Dbxref=Genbank:WP_016193209.1;Name=WP_016193209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114933.1;locus_tag=LU631_RS11190;product=lysozyme;protein_id=WP_016193209.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2111978 2112280 . - . ID=gene-LU631_RS11195;Name=LU631_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11195;old_locus_tag=LU631_11195 NZ_CP089940.1 Protein Homology CDS 2111978 2112280 . - 0 ID=cds-WP_016193210.1-2;Parent=gene-LU631_RS11195;Dbxref=Genbank:WP_016193210.1;Name=WP_016193210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003835852.1;locus_tag=LU631_RS11195;product=hypothetical protein;protein_id=WP_016193210.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2112271 2112471 . - . ID=gene-LU631_RS11200;Name=LU631_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11200;old_locus_tag=LU631_11200 NZ_CP089940.1 Protein Homology CDS 2112271 2112471 . - 0 ID=cds-WP_016193211.1-2;Parent=gene-LU631_RS11200;Dbxref=Genbank:WP_016193211.1;Name=WP_016193211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537159.1;locus_tag=LU631_RS11200;product=tail protein X;protein_id=WP_016193211.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2112471 2112995 . - . ID=gene-LU631_RS11205;Name=LU631_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11205;old_locus_tag=LU631_11205 NZ_CP089940.1 Protein Homology CDS 2112471 2112995 . - 0 ID=cds-WP_016193212.1-2;Parent=gene-LU631_RS11205;Dbxref=Genbank:WP_016193212.1;Name=WP_016193212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193212.1;locus_tag=LU631_RS11205;product=head completion/stabilization protein;protein_id=WP_016193212.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2113092 2113949 . - . ID=gene-LU631_RS11210;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=LU631_RS11210;old_locus_tag=LU631_11210 NZ_CP089940.1 Protein Homology CDS 2113092 2113949 . - 0 ID=cds-WP_040465938.1-2;Parent=gene-LU631_RS11210;Dbxref=Genbank:WP_040465938.1;Name=WP_040465938.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072479.1;locus_tag=LU631_RS11210;product=phage terminase small subunit;protein_id=WP_040465938.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2113974 2115023 . - . ID=gene-LU631_RS11215;Name=LU631_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11215;old_locus_tag=LU631_11215 NZ_CP089940.1 Protein Homology CDS 2113974 2115023 . - 0 ID=cds-WP_016193214.1-2;Parent=gene-LU631_RS11215;Dbxref=Genbank:WP_016193214.1;Name=WP_016193214.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193214.1;locus_tag=LU631_RS11215;product=phage major capsid protein%2C P2 family;protein_id=WP_016193214.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2115047 2115883 . - . ID=gene-LU631_RS11220;Name=LU631_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11220;old_locus_tag=LU631_11220 NZ_CP089940.1 Protein Homology CDS 2115047 2115883 . - 0 ID=cds-WP_016193215.1-2;Parent=gene-LU631_RS11220;Dbxref=Genbank:WP_016193215.1;Name=WP_016193215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500366.1;locus_tag=LU631_RS11220;product=GPO family capsid scaffolding protein;protein_id=WP_016193215.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2116043 2117773 . + . ID=gene-LU631_RS11225;Name=LU631_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11225;old_locus_tag=LU631_11225 NZ_CP089940.1 Protein Homology CDS 2116043 2117773 . + 0 ID=cds-WP_040465939.1-2;Parent=gene-LU631_RS11225;Dbxref=Genbank:WP_040465939.1;Name=WP_040465939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855478.1;locus_tag=LU631_RS11225;product=terminase family protein;protein_id=WP_040465939.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2117773 2118831 . + . ID=gene-LU631_RS11230;Name=LU631_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11230;old_locus_tag=LU631_11230 NZ_CP089940.1 Protein Homology CDS 2117773 2118831 . + 0 ID=cds-WP_016193218.1-2;Parent=gene-LU631_RS11230;Dbxref=Genbank:WP_016193218.1;Name=WP_016193218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072483.1;locus_tag=LU631_RS11230;product=phage portal protein;protein_id=WP_016193218.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2118902 2119405 . - . ID=gene-LU631_RS11235;Name=LU631_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11235;old_locus_tag=LU631_11235 NZ_CP089940.1 GeneMarkS-2+ CDS 2118902 2119405 . - 0 ID=cds-WP_016193219.1-2;Parent=gene-LU631_RS11235;Dbxref=Genbank:WP_016193219.1;Name=WP_016193219.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS11235;product=hypothetical protein;protein_id=WP_016193219.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2119815 2120198 . - . ID=gene-LU631_RS11240;Name=LU631_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11240;old_locus_tag=LU631_11240 NZ_CP089940.1 Protein Homology CDS 2119815 2120198 . - 0 ID=cds-WP_046371846.1;Parent=gene-LU631_RS11240;Dbxref=Genbank:WP_046371846.1;Name=WP_046371846.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117882.1;locus_tag=LU631_RS11240;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_046371846.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2120195 2120416 . - . ID=gene-LU631_RS11245;Name=LU631_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11245;old_locus_tag=LU631_11245 NZ_CP089940.1 Protein Homology CDS 2120195 2120416 . - 0 ID=cds-WP_006117881.1;Parent=gene-LU631_RS11245;Dbxref=Genbank:WP_006117881.1;Name=WP_006117881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016941532.1;locus_tag=LU631_RS11245;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_006117881.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2120483 2121178 . - . ID=gene-LU631_RS11250;Name=LU631_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11250;old_locus_tag=LU631_11250 NZ_CP089940.1 Protein Homology CDS 2120483 2121178 . - 0 ID=cds-WP_046371847.1;Parent=gene-LU631_RS11250;Dbxref=Genbank:WP_046371847.1;Name=WP_046371847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155224.1;locus_tag=LU631_RS11250;product=DNA methylase;protein_id=WP_046371847.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2121428 2121787 . - . ID=gene-LU631_RS11255;Name=LU631_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11255;old_locus_tag=LU631_11255 NZ_CP089940.1 Protein Homology CDS 2121428 2121787 . - 0 ID=cds-WP_046371849.1-2;Parent=gene-LU631_RS11255;Dbxref=Genbank:WP_046371849.1;Name=WP_046371849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181489.1;locus_tag=LU631_RS11255;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_046371849.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2121807 2122073 . - . ID=gene-LU631_RS11260;Name=LU631_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11260;old_locus_tag=LU631_11260 NZ_CP089940.1 GeneMarkS-2+ CDS 2121807 2122073 . - 0 ID=cds-WP_046371850.1-2;Parent=gene-LU631_RS11260;Dbxref=Genbank:WP_046371850.1;Name=WP_046371850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS11260;product=hypothetical protein;protein_id=WP_046371850.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2122039 2124558 . - . ID=gene-LU631_RS11265;Name=LU631_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11265;old_locus_tag=LU631_11265 NZ_CP089940.1 Protein Homology CDS 2122039 2124558 . - 0 ID=cds-WP_052734690.1;Parent=gene-LU631_RS11265;Dbxref=Genbank:WP_052734690.1;Name=WP_052734690.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015871545.1;locus_tag=LU631_RS11265;product=replication endonuclease;protein_id=WP_052734690.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2124558 2124941 . - . ID=gene-LU631_RS11270;Name=LU631_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11270;old_locus_tag=LU631_11270 NZ_CP089940.1 GeneMarkS-2+ CDS 2124558 2124941 . - 0 ID=cds-WP_016193222.1-2;Parent=gene-LU631_RS11270;Dbxref=Genbank:WP_016193222.1;Name=WP_016193222.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS11270;product=hypothetical protein;protein_id=WP_016193222.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2125014 2125256 . - . ID=gene-LU631_RS11275;Name=LU631_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11275;old_locus_tag=LU631_11275 NZ_CP089940.1 GeneMarkS-2+ CDS 2125014 2125256 . - 0 ID=cds-WP_016193223.1-2;Parent=gene-LU631_RS11275;Dbxref=Genbank:WP_016193223.1;Name=WP_016193223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS11275;product=hypothetical protein;protein_id=WP_016193223.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2125304 2125570 . - . ID=gene-LU631_RS11280;Name=LU631_RS11280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11280;old_locus_tag=LU631_11280;partial=true;pseudo=true;start_range=.,2125304 NZ_CP089940.1 Protein Homology CDS 2125304 2125570 . - 0 ID=cds-LU631_RS11280;Parent=gene-LU631_RS11280;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022029.2;locus_tag=LU631_RS11280;partial=true;product=ash family protein;pseudo=true;start_range=.,2125304;transl_table=11 NZ_CP089940.1 RefSeq gene 2125588 2125794 . - . ID=gene-LU631_RS11285;Name=LU631_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11285;old_locus_tag=LU631_11285 NZ_CP089940.1 GeneMarkS-2+ CDS 2125588 2125794 . - 0 ID=cds-WP_016193242.1-2;Parent=gene-LU631_RS11285;Dbxref=Genbank:WP_016193242.1;Name=WP_016193242.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS11285;product=hypothetical protein;protein_id=WP_016193242.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2125791 2126633 . - . ID=gene-LU631_RS11290;Name=LU631_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11290;old_locus_tag=LU631_11290 NZ_CP089940.1 Protein Homology CDS 2125791 2126633 . - 0 ID=cds-WP_016193243.1-2;Parent=gene-LU631_RS11290;Dbxref=Genbank:WP_016193243.1;Name=WP_016193243.1;Ontology_term=GO:0006306,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117877.1;locus_tag=LU631_RS11290;product=Dam family site-specific DNA-(adenine-N6)-methyltransferase;protein_id=WP_016193243.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2126630 2127202 . - . ID=gene-LU631_RS11295;Name=LU631_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11295;old_locus_tag=LU631_11295 NZ_CP089940.1 Protein Homology CDS 2126630 2127202 . - 0 ID=cds-WP_016193244.1-2;Parent=gene-LU631_RS11295;Dbxref=Genbank:WP_016193244.1;Name=WP_016193244.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027788.2;locus_tag=LU631_RS11295;product=3'-5' exonuclease;protein_id=WP_016193244.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2127272 2127664 . - . ID=gene-LU631_RS11300;Name=LU631_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11300;old_locus_tag=LU631_11300 NZ_CP089940.1 Protein Homology CDS 2127272 2127664 . - 0 ID=cds-WP_040465952.1-2;Parent=gene-LU631_RS11300;Dbxref=Genbank:WP_040465952.1;Name=WP_040465952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001514713.1;locus_tag=LU631_RS11300;product=hypothetical protein;protein_id=WP_040465952.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2127834 2128070 . - . ID=gene-LU631_RS11305;Name=LU631_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11305;old_locus_tag=LU631_11305 NZ_CP089940.1 GeneMarkS-2+ CDS 2127834 2128070 . - 0 ID=cds-WP_040465953.1-2;Parent=gene-LU631_RS11305;Dbxref=Genbank:WP_040465953.1;Name=WP_040465953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS11305;product=hypothetical protein;protein_id=WP_040465953.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2128408 2128647 . - . ID=gene-LU631_RS11310;Name=LU631_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11310;old_locus_tag=LU631_11310 NZ_CP089940.1 Protein Homology CDS 2128408 2128647 . - 0 ID=cds-WP_016193245.1-2;Parent=gene-LU631_RS11310;Dbxref=Genbank:WP_016193245.1;Name=WP_016193245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201494.1;locus_tag=LU631_RS11310;product=hypothetical protein;protein_id=WP_016193245.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2128616 2128798 . - . ID=gene-LU631_RS11315;Name=LU631_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11315;old_locus_tag=LU631_11315 NZ_CP089940.1 GeneMarkS-2+ CDS 2128616 2128798 . - 0 ID=cds-WP_046371852.1-2;Parent=gene-LU631_RS11315;Dbxref=Genbank:WP_046371852.1;Name=WP_046371852.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS11315;product=hypothetical protein;protein_id=WP_046371852.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2128776 2129033 . - . ID=gene-LU631_RS11320;Name=LU631_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11320;old_locus_tag=LU631_11320 NZ_CP089940.1 Protein Homology CDS 2128776 2129033 . - 0 ID=cds-WP_016193247.1-2;Parent=gene-LU631_RS11320;Dbxref=Genbank:WP_016193247.1;Name=WP_016193247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003835823.1;locus_tag=LU631_RS11320;product=hypothetical protein;protein_id=WP_016193247.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2129030 2129461 . - . ID=gene-LU631_RS11325;Name=LU631_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11325;old_locus_tag=LU631_11325 NZ_CP089940.1 GeneMarkS-2+ CDS 2129030 2129461 . - 0 ID=cds-WP_233481908.1-2;Parent=gene-LU631_RS11325;Dbxref=Genbank:WP_233481908.1;Name=WP_233481908.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS11325;product=hypothetical protein;protein_id=WP_233481908.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2129566 2129847 . + . ID=gene-LU631_RS11330;Name=LU631_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11330;old_locus_tag=LU631_11330 NZ_CP089940.1 Protein Homology CDS 2129566 2129847 . + 0 ID=cds-WP_046371853.1;Parent=gene-LU631_RS11330;Dbxref=Genbank:WP_046371853.1;Name=WP_046371853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536686.1;locus_tag=LU631_RS11330;product=helix-turn-helix transcriptional regulator;protein_id=WP_046371853.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2129932 2130951 . + . ID=gene-LU631_RS11335;Name=LU631_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11335;old_locus_tag=LU631_11335 NZ_CP089940.1 Protein Homology CDS 2129932 2130951 . + 0 ID=cds-WP_046371854.1;Parent=gene-LU631_RS11335;Dbxref=Genbank:WP_046371854.1;Name=WP_046371854.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017371518.1;locus_tag=LU631_RS11335;product=tyrosine-type recombinase/integrase;protein_id=WP_046371854.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2131189 2131578 . - . ID=gene-LU631_RS11340;Name=LU631_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11340;old_locus_tag=LU631_11340 NZ_CP089940.1 GeneMarkS-2+ CDS 2131189 2131578 . - 0 ID=cds-WP_233482014.1;Parent=gene-LU631_RS11340;Dbxref=Genbank:WP_233482014.1;Name=WP_233482014.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS11340;product=hypothetical protein;protein_id=WP_233482014.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2132326 2132715 . + . ID=gene-LU631_RS11345;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=LU631_RS11345;old_locus_tag=LU631_11345 NZ_CP089940.1 Protein Homology CDS 2132326 2132715 . + 0 ID=cds-WP_016192230.1;Parent=gene-LU631_RS11345;Dbxref=Genbank:WP_016192230.1;Name=WP_016192230.1;Ontology_term=GO:0006355,GO:0006878,GO:0003700;gbkey=CDS;gene=cueR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,cellular copper ion homeostasis|0006878||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749000.1;locus_tag=LU631_RS11345;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_016192230.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2133443 2133892 . - . ID=gene-LU631_RS11350;Name=LU631_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11350;old_locus_tag=LU631_11350 NZ_CP089940.1 Protein Homology CDS 2133443 2133892 . - 0 ID=cds-WP_016192229.1;Parent=gene-LU631_RS11350;Dbxref=Genbank:WP_016192229.1;Name=WP_016192229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156454.1;locus_tag=LU631_RS11350;product=NfeD family protein;protein_id=WP_016192229.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2133889 2134803 . - . ID=gene-LU631_RS11355;Name=LU631_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11355;old_locus_tag=LU631_11355 NZ_CP089940.1 Protein Homology CDS 2133889 2134803 . - 0 ID=cds-WP_016192228.1;Parent=gene-LU631_RS11355;Dbxref=Genbank:WP_016192228.1;Name=WP_016192228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156457.1;locus_tag=LU631_RS11355;product=SPFH domain-containing protein;protein_id=WP_016192228.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2134920 2135777 . - . ID=gene-LU631_RS11360;Name=LU631_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11360;old_locus_tag=LU631_11360 NZ_CP089940.1 Protein Homology CDS 2134920 2135777 . - 0 ID=cds-WP_016192227.1;Parent=gene-LU631_RS11360;Dbxref=Genbank:WP_016192227.1;Name=WP_016192227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106621.1;locus_tag=LU631_RS11360;product=co-chaperone YbbN;protein_id=WP_016192227.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2135831 2136667 . - . ID=gene-LU631_RS11365;Name=LU631_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11365;old_locus_tag=LU631_11365 NZ_CP089940.1 Protein Homology CDS 2135831 2136667 . - 0 ID=cds-WP_198292539.1;Parent=gene-LU631_RS11365;Dbxref=Genbank:WP_198292539.1;Name=WP_198292539.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148959.1;locus_tag=LU631_RS11365;product=SDR family oxidoreductase;protein_id=WP_198292539.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2136660 2137283 . - . ID=gene-LU631_RS11370;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=LU631_RS11370;old_locus_tag=LU631_11370 NZ_CP089940.1 Protein Homology CDS 2136660 2137283 . - 0 ID=cds-WP_016192225.1;Parent=gene-LU631_RS11370;Dbxref=Genbank:WP_016192225.1;Name=WP_016192225.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192225.1;locus_tag=LU631_RS11370;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_016192225.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2137254 2137940 . + . ID=gene-LU631_RS11375;Name=LU631_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11375;old_locus_tag=LU631_11375 NZ_CP089940.1 Protein Homology CDS 2137254 2137940 . + 0 ID=cds-WP_016192224.1;Parent=gene-LU631_RS11375;Dbxref=Genbank:WP_016192224.1;Name=WP_016192224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013508191.1;locus_tag=LU631_RS11375;product=ABC transporter ATP-binding protein;protein_id=WP_016192224.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2137937 2140354 . + . ID=gene-LU631_RS11380;Name=LU631_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11380;old_locus_tag=LU631_11380 NZ_CP089940.1 Protein Homology CDS 2137937 2140354 . + 0 ID=cds-WP_016192223.1;Parent=gene-LU631_RS11380;Dbxref=Genbank:WP_016192223.1;Name=WP_016192223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201146.1;locus_tag=LU631_RS11380;product=ABC transporter permease;protein_id=WP_016192223.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2140492 2141574 . - . ID=gene-LU631_RS11385;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=LU631_RS11385;old_locus_tag=LU631_11385 NZ_CP089940.1 Protein Homology CDS 2140492 2141574 . - 0 ID=cds-WP_016192222.1;Parent=gene-LU631_RS11385;Dbxref=Genbank:WP_016192222.1;Name=WP_016192222.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014729389.1;locus_tag=LU631_RS11385;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_016192222.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2141571 2142080 . - . ID=gene-LU631_RS11390;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=LU631_RS11390;old_locus_tag=LU631_11390 NZ_CP089940.1 Protein Homology CDS 2141571 2142080 . - 0 ID=cds-WP_016192221.1;Parent=gene-LU631_RS11390;Dbxref=Genbank:WP_016192221.1;Name=WP_016192221.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009111975.1;locus_tag=LU631_RS11390;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_016192221.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2143168 2143893 . - . ID=gene-LU631_RS11395;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=LU631_RS11395;old_locus_tag=LU631_11395 NZ_CP089940.1 Protein Homology CDS 2143168 2143893 . - 0 ID=cds-WP_016192220.1;Parent=gene-LU631_RS11395;Dbxref=Genbank:WP_016192220.1;Name=WP_016192220.1;Ontology_term=GO:0009245,GO:0008758;gbkey=CDS;gene=lpxH;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008460209.1;locus_tag=LU631_RS11395;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_016192220.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2143893 2144387 . - . ID=gene-LU631_RS11400;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=LU631_RS11400;old_locus_tag=LU631_11400 NZ_CP089940.1 Protein Homology CDS 2143893 2144387 . - 0 ID=cds-WP_016192219.1;Parent=gene-LU631_RS11400;Dbxref=Genbank:WP_016192219.1;Name=WP_016192219.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459531.1;locus_tag=LU631_RS11400;product=peptidylprolyl isomerase B;protein_id=WP_016192219.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2144610 2146001 . + . ID=gene-LU631_RS11405;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=LU631_RS11405;old_locus_tag=LU631_11405 NZ_CP089940.1 Protein Homology CDS 2144610 2146001 . + 0 ID=cds-WP_016192218.1;Parent=gene-LU631_RS11405;Dbxref=Genbank:WP_016192218.1;Name=WP_016192218.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459532.1;locus_tag=LU631_RS11405;product=cysteine--tRNA ligase;protein_id=WP_016192218.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2146168 2147208 . + . ID=gene-LU631_RS11410;Name=LU631_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11410;old_locus_tag=LU631_11410 NZ_CP089940.1 Protein Homology CDS 2146168 2147208 . + 0 ID=cds-WP_046371813.1-9;Parent=gene-LU631_RS11410;Dbxref=Genbank:WP_046371813.1;Name=WP_046371813.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS11410;product=IS481 family transposase;protein_id=WP_046371813.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2147377 2148335 . - . ID=gene-LU631_RS11415;Name=LU631_RS11415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11415;old_locus_tag=LU631_11415;pseudo=true NZ_CP089940.1 Protein Homology CDS 2147377 2148335 . - 0 ID=cds-LU631_RS11415;Parent=gene-LU631_RS11415;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=LU631_RS11415;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2149181 2149959 . + . ID=gene-LU631_RS11420;Name=LU631_RS11420;end_range=2149959,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11420;old_locus_tag=LU631_11420;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2149181 2149959 . + 0 ID=cds-LU631_RS11420;Parent=gene-LU631_RS11420;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2149959,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS11420;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2150302 2150514 . - . ID=gene-LU631_RS11425;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=LU631_RS11425;old_locus_tag=LU631_11425 NZ_CP089940.1 Protein Homology CDS 2150302 2150514 . - 0 ID=cds-WP_016192215.1;Parent=gene-LU631_RS11425;Dbxref=Genbank:WP_016192215.1;Name=WP_016192215.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=LU631_RS11425;product=ribosome-associated protein YbcJ;protein_id=WP_016192215.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2150514 2151380 . - . ID=gene-LU631_RS11430;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=LU631_RS11430;old_locus_tag=LU631_11430 NZ_CP089940.1 Protein Homology CDS 2150514 2151380 . - 0 ID=cds-WP_016192214.1;Parent=gene-LU631_RS11430;Dbxref=Genbank:WP_016192214.1;Name=WP_016192214.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492640.1;locus_tag=LU631_RS11430;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_016192214.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2151560 2151636 . + . ID=gene-LU631_RS11435;Name=LU631_RS11435;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS11435;old_locus_tag=LU631_11435 NZ_CP089940.1 tRNAscan-SE tRNA 2151560 2151636 . + . ID=rna-LU631_RS11435;Parent=gene-LU631_RS11435;anticodon=(pos:2151594..2151596);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS11435;product=tRNA-Arg NZ_CP089940.1 tRNAscan-SE exon 2151560 2151636 . + . ID=exon-LU631_RS11435-1;Parent=rna-LU631_RS11435;anticodon=(pos:2151594..2151596);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS11435;product=tRNA-Arg NZ_CP089940.1 RefSeq pseudogene 2151801 2152444 . + . ID=gene-LU631_RS11440;Name=LU631_RS11440;end_range=2152444,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11440;old_locus_tag=LU631_11440;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2151801 2152444 . + 0 ID=cds-LU631_RS11440;Parent=gene-LU631_RS11440;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2152444,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146471.1;locus_tag=LU631_RS11440;partial=true;product=integrase arm-type DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2152529 2153649 . + . ID=gene-LU631_RS11445;Name=LU631_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11445;old_locus_tag=LU631_11445 NZ_CP089940.1 Protein Homology CDS 2152529 2152787 . + 0 ID=cds-WP_152664191.1;Parent=gene-LU631_RS11445;Dbxref=Genbank:WP_152664191.1;Name=WP_152664191.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS11445;product=IS3 family transposase;protein_id=WP_152664191.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 2152787 2153649 . + 2 ID=cds-WP_152664191.1;Parent=gene-LU631_RS11445;Dbxref=Genbank:WP_152664191.1;Name=WP_152664191.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS11445;product=IS3 family transposase;protein_id=WP_152664191.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2153693 2153881 . + . ID=gene-LU631_RS11450;Name=LU631_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11450;old_locus_tag=LU631_11450 NZ_CP089940.1 GeneMarkS-2+ CDS 2153693 2153881 . + 0 ID=cds-WP_016192211.1;Parent=gene-LU631_RS11450;Dbxref=Genbank:WP_016192211.1;Name=WP_016192211.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS11450;product=hypothetical protein;protein_id=WP_016192211.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2154025 2154351 . + . ID=gene-LU631_RS11455;Name=LU631_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11455;old_locus_tag=LU631_11455 NZ_CP089940.1 GeneMarkS-2+ CDS 2154025 2154351 . + 0 ID=cds-WP_016192210.1;Parent=gene-LU631_RS11455;Dbxref=Genbank:WP_016192210.1;Name=WP_016192210.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS11455;product=hypothetical protein;protein_id=WP_016192210.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2154348 2155157 . - . ID=gene-LU631_RS11460;Name=LU631_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11460;old_locus_tag=LU631_11460 NZ_CP089940.1 Protein Homology CDS 2154348 2155157 . - 0 ID=cds-WP_016192209.1;Parent=gene-LU631_RS11460;Dbxref=Genbank:WP_016192209.1;Name=WP_016192209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192209.1;locus_tag=LU631_RS11460;product=DUF4225 domain-containing protein;protein_id=WP_016192209.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2155234 2155716 . + . ID=gene-LU631_RS11465;Name=LU631_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11465;old_locus_tag=LU631_11465 NZ_CP089940.1 Protein Homology CDS 2155234 2155716 . + 0 ID=cds-WP_016192208.1;Parent=gene-LU631_RS11465;Dbxref=Genbank:WP_016192208.1;Name=WP_016192208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366565.1;locus_tag=LU631_RS11465;product=type VI secretion system tube protein Hcp;protein_id=WP_016192208.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2156174 2156596 . - . ID=gene-LU631_RS11470;Name=LU631_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11470;old_locus_tag=LU631_11470 NZ_CP089940.1 GeneMarkS-2+ CDS 2156174 2156596 . - 0 ID=cds-WP_016192206.1;Parent=gene-LU631_RS11470;Dbxref=Genbank:WP_016192206.1;Name=WP_016192206.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS11470;product=hypothetical protein;protein_id=WP_016192206.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2156994 2157407 . - . ID=gene-LU631_RS11475;Name=LU631_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11475;old_locus_tag=LU631_11475 NZ_CP089940.1 Protein Homology CDS 2156994 2157407 . - 0 ID=cds-WP_016192205.1;Parent=gene-LU631_RS11475;Dbxref=Genbank:WP_016192205.1;Name=WP_016192205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015699882.1;locus_tag=LU631_RS11475;product=hypothetical protein;protein_id=WP_016192205.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2157503 2157802 . - . ID=gene-LU631_RS11480;Name=LU631_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11480;old_locus_tag=LU631_11480 NZ_CP089940.1 GeneMarkS-2+ CDS 2157503 2157802 . - 0 ID=cds-WP_233482015.1;Parent=gene-LU631_RS11480;Dbxref=Genbank:WP_233482015.1;Name=WP_233482015.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS11480;product=hypothetical protein;protein_id=WP_233482015.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2157895 2159015 . - . ID=gene-LU631_RS11485;Name=LU631_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11485;old_locus_tag=LU631_11485 NZ_CP089940.1 Protein Homology CDS 2158757 2159015 . - 0 ID=cds-WP_152664161.1;Parent=gene-LU631_RS11485;Dbxref=Genbank:WP_152664161.1;Name=WP_152664161.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS11485;product=IS3 family transposase;protein_id=WP_152664161.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 2157895 2158757 . - 2 ID=cds-WP_152664161.1;Parent=gene-LU631_RS11485;Dbxref=Genbank:WP_152664161.1;Name=WP_152664161.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS11485;product=IS3 family transposase;protein_id=WP_152664161.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2159169 2160492 . + . ID=gene-LU631_RS11490;Name=LU631_RS11490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11490;old_locus_tag=LU631_11490;pseudo=true NZ_CP089940.1 Protein Homology CDS 2159169 2160492 . + 0 ID=cds-LU631_RS11490;Parent=gene-LU631_RS11490;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS11490;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2160526 2160738 . + . ID=gene-LU631_RS11495;Name=LU631_RS11495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11495;old_locus_tag=LU631_11495;partial=true;pseudo=true;start_range=.,2160526 NZ_CP089940.1 Protein Homology CDS 2160526 2160738 . + 0 ID=cds-LU631_RS11495;Parent=gene-LU631_RS11495;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033894.1;locus_tag=LU631_RS11495;partial=true;product=EexN family lipoprotein;pseudo=true;start_range=.,2160526;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2160799 2162008 . + . ID=gene-LU631_RS11500;Name=LU631_RS11500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11500;old_locus_tag=LU631_11500;pseudo=true NZ_CP089940.1 Protein Homology CDS 2160799 2162008 . + 0 ID=cds-LU631_RS11500;Parent=gene-LU631_RS11500;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS11500;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2162154 2163191 . - . ID=gene-LU631_RS11505;Name=LU631_RS11505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11505;old_locus_tag=LU631_11505;pseudo=true NZ_CP089940.1 Protein Homology CDS 2162154 2163191 . - 0 ID=cds-LU631_RS11505;Parent=gene-LU631_RS11505;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS11505;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2163440 2164663 . - . ID=gene-LU631_RS11510;Name=LU631_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11510;old_locus_tag=LU631_11510 NZ_CP089940.1 Protein Homology CDS 2163440 2164663 . - 0 ID=cds-WP_046371990.1;Parent=gene-LU631_RS11510;Dbxref=Genbank:WP_046371990.1;Name=WP_046371990.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU631_RS11510;product=IS91 family transposase;protein_id=WP_046371990.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2164748 2165304 . + . ID=gene-LU631_RS11515;Name=LU631_RS11515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11515;old_locus_tag=LU631_11515;partial=true;pseudo=true;start_range=.,2164748 NZ_CP089940.1 Protein Homology CDS 2164748 2165304 . + 0 ID=cds-LU631_RS11515;Parent=gene-LU631_RS11515;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU631_RS11515;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,2164748;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2165380 2165631 . + . ID=gene-LU631_RS11520;Name=LU631_RS11520;end_range=2165631,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11520;old_locus_tag=LU631_11520;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2165380 2165631 . + 0 ID=cds-LU631_RS11520;Parent=gene-LU631_RS11520;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;end_range=2165631,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000684988.1;locus_tag=LU631_RS11520;partial=true;product=recombinase family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2166047 2167354 . - . ID=gene-LU631_RS11525;Name=LU631_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11525;old_locus_tag=LU631_11525 NZ_CP089940.1 Protein Homology CDS 2166047 2167354 . - 0 ID=cds-WP_040465738.1;Parent=gene-LU631_RS11525;Dbxref=Genbank:WP_040465738.1;Name=WP_040465738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012884580.1;locus_tag=LU631_RS11525;product=lytic murein transglycosylase;protein_id=WP_040465738.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2167924 2168376 . - . ID=gene-LU631_RS11530;Name=LU631_RS11530;end_range=2168376,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11530;old_locus_tag=LU631_11530;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2167924 2168376 . - 0 ID=cds-LU631_RS11530;Parent=gene-LU631_RS11530;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2168376,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=LU631_RS11530;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2168371 2169114 . - . ID=gene-LU631_RS11535;Name=LU631_RS11535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11535;old_locus_tag=LU631_11535;partial=true;pseudo=true;start_range=.,2168371 NZ_CP089940.1 Protein Homology CDS 2168371 2169114 . - 0 ID=cds-LU631_RS11535;Parent=gene-LU631_RS11535;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU631_RS11535;partial=true;product=transposase;pseudo=true;start_range=.,2168371;transl_table=11 NZ_CP089940.1 RefSeq gene 2169208 2169681 . - . ID=gene-LU631_RS11540;Name=LU631_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11540;old_locus_tag=LU631_11540 NZ_CP089940.1 Protein Homology CDS 2169208 2169681 . - 0 ID=cds-WP_016192197.1;Parent=gene-LU631_RS11540;Dbxref=Genbank:WP_016192197.1;Name=WP_016192197.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023996.2;locus_tag=LU631_RS11540;product=DUF3757 domain-containing protein;protein_id=WP_016192197.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2169836 2170060 . - . ID=gene-LU631_RS11545;Name=LU631_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11545;old_locus_tag=LU631_11545 NZ_CP089940.1 Protein Homology CDS 2169836 2170060 . - 0 ID=cds-WP_051124401.1;Parent=gene-LU631_RS11545;Dbxref=Genbank:WP_051124401.1;Name=WP_051124401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004954131.1;locus_tag=LU631_RS11545;product=hypothetical protein;protein_id=WP_051124401.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2170117 2170269 . - . ID=gene-LU631_RS11550;Name=LU631_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11550;old_locus_tag=LU631_11550 NZ_CP089940.1 GeneMarkS-2+ CDS 2170117 2170269 . - 0 ID=cds-WP_161796973.1;Parent=gene-LU631_RS11550;Dbxref=Genbank:WP_161796973.1;Name=WP_161796973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS11550;product=hypothetical protein;protein_id=WP_161796973.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2170410 2170583 . + . ID=gene-LU631_RS11555;Name=LU631_RS11555;end_range=2170583,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11555;old_locus_tag=LU631_11555;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2170410 2170583 . + 0 ID=cds-LU631_RS11555;Parent=gene-LU631_RS11555;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2170583,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707455.1;locus_tag=LU631_RS11555;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2170647 2171753 . + . ID=gene-LU631_RS11560;Name=LU631_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11560;old_locus_tag=LU631_11560 NZ_CP089940.1 Protein Homology CDS 2170647 2171753 . + 0 ID=cds-WP_233482028.1;Parent=gene-LU631_RS11560;Dbxref=Genbank:WP_233482028.1;Name=WP_233482028.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558175.1;locus_tag=LU631_RS11560;product=IS91 family transposase;protein_id=WP_233482028.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2172015 2172293 . + . ID=gene-LU631_RS11565;Name=LU631_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11565;old_locus_tag=LU631_11565 NZ_CP089940.1 Protein Homology CDS 2172015 2172293 . + 0 ID=cds-WP_016192195.1;Parent=gene-LU631_RS11565;Dbxref=Genbank:WP_016192195.1;Name=WP_016192195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408759.1;locus_tag=LU631_RS11565;product=CopG family ribbon-helix-helix protein;protein_id=WP_016192195.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2172281 2172592 . + . ID=gene-LU631_RS11570;Name=LU631_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11570;old_locus_tag=LU631_11570 NZ_CP089940.1 Protein Homology CDS 2172281 2172592 . + 0 ID=cds-WP_016192194.1;Parent=gene-LU631_RS11570;Dbxref=Genbank:WP_016192194.1;Name=WP_016192194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542885.1;locus_tag=LU631_RS11570;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_016192194.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2172718 2173152 . + . ID=gene-LU631_RS11575;Name=LU631_RS11575;end_range=2173152,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11575;old_locus_tag=LU631_11575;partial=true;pseudo=true;start_range=.,2172718 NZ_CP089940.1 Protein Homology CDS 2172718 2173152 . + 0 ID=cds-LU631_RS11575;Parent=gene-LU631_RS11575;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=2173152,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611500.1;locus_tag=LU631_RS11575;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,2172718;transl_table=11 NZ_CP089940.1 RefSeq gene 2173317 2174534 . - . ID=gene-LU631_RS11580;Name=LU631_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11580;old_locus_tag=LU631_11580 NZ_CP089940.1 Protein Homology CDS 2173317 2174534 . - 0 ID=cds-WP_040465737.1;Parent=gene-LU631_RS11580;Dbxref=Genbank:WP_040465737.1;Name=WP_040465737.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611524.1;locus_tag=LU631_RS11580;product=IS91 family transposase;protein_id=WP_040465737.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2174521 2174751 . - . ID=gene-LU631_RS11585;Name=LU631_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11585;old_locus_tag=LU631_11585 NZ_CP089940.1 GeneMarkS-2+ CDS 2174521 2174751 . - 0 ID=cds-WP_046371992.1;Parent=gene-LU631_RS11585;Dbxref=Genbank:WP_046371992.1;Name=WP_046371992.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS11585;product=hypothetical protein;protein_id=WP_046371992.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2174870 2175106 . + . ID=gene-LU631_RS11590;Name=LU631_RS11590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11590;old_locus_tag=LU631_11590;partial=true;pseudo=true;start_range=.,2174870 NZ_CP089940.1 Protein Homology CDS 2174870 2175106 . + 0 ID=cds-LU631_RS11590;Parent=gene-LU631_RS11590;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365374.1;locus_tag=LU631_RS11590;partial=true;product=transposase;pseudo=true;start_range=.,2174870;transl_table=11 NZ_CP089940.1 RefSeq gene 2175180 2175877 . + . ID=gene-LU631_RS11595;Name=LU631_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11595;old_locus_tag=LU631_11595 NZ_CP089940.1 Protein Homology CDS 2175180 2175429 . + 0 ID=cds-WP_152664192.1;Parent=gene-LU631_RS11595;Dbxref=Genbank:WP_152664192.1;Name=WP_152664192.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS11595;product=IS1 family transposase;protein_id=WP_152664192.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 2175429 2175877 . + 2 ID=cds-WP_152664192.1;Parent=gene-LU631_RS11595;Dbxref=Genbank:WP_152664192.1;Name=WP_152664192.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS11595;product=IS1 family transposase;protein_id=WP_152664192.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2175981 2176427 . - . ID=gene-LU631_RS11600;Name=LU631_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11600;old_locus_tag=LU631_11600 NZ_CP089940.1 Protein Homology CDS 2175981 2176427 . - 0 ID=cds-WP_071598937.1;Parent=gene-LU631_RS11600;Dbxref=Genbank:WP_071598937.1;Name=WP_071598937.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF013434.2;locus_tag=LU631_RS11600;product=FAD-dependent oxidoreductase;protein_id=WP_071598937.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2176424 2177137 . - . ID=gene-LU631_RS11605;Name=LU631_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11605;old_locus_tag=LU631_11605 NZ_CP089940.1 Protein Homology CDS 2176424 2177137 . - 0 ID=cds-WP_016192189.1;Parent=gene-LU631_RS11605;Dbxref=Genbank:WP_016192189.1;Name=WP_016192189.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013434.2;locus_tag=LU631_RS11605;product=FAD-dependent oxidoreductase;protein_id=WP_016192189.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2177130 2177441 . - . ID=gene-LU631_RS11610;Name=LU631_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11610;old_locus_tag=LU631_11610 NZ_CP089940.1 Protein Homology CDS 2177130 2177441 . - 0 ID=cds-WP_016192188.1;Parent=gene-LU631_RS11610;Dbxref=Genbank:WP_016192188.1;Name=WP_016192188.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019498.2;locus_tag=LU631_RS11610;product=cupin domain-containing protein;protein_id=WP_016192188.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2177450 2178937 . - . ID=gene-LU631_RS11615;Name=LU631_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11615;old_locus_tag=LU631_11615 NZ_CP089940.1 Protein Homology CDS 2177450 2178937 . - 0 ID=cds-WP_016192187.1;Parent=gene-LU631_RS11615;Dbxref=Genbank:WP_016192187.1;Name=WP_016192187.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: protein motif:HMM:NF020892.2;locus_tag=LU631_RS11615;product=class I tRNA ligase family protein;protein_id=WP_016192187.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2178947 2180221 . - . ID=gene-LU631_RS11620;Name=LU631_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11620;old_locus_tag=LU631_11620 NZ_CP089940.1 Protein Homology CDS 2178947 2180221 . - 0 ID=cds-WP_051124400.1;Parent=gene-LU631_RS11620;Dbxref=Genbank:WP_051124400.1;Name=WP_051124400.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024826.2;locus_tag=LU631_RS11620;product=SidA/IucD/PvdA family monooxygenase;protein_id=WP_051124400.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2180270 2180650 . - . ID=gene-LU631_RS11625;Name=LU631_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11625;old_locus_tag=LU631_11625 NZ_CP089940.1 Protein Homology CDS 2180270 2180650 . - 0 ID=cds-WP_016192185.1;Parent=gene-LU631_RS11625;Dbxref=Genbank:WP_016192185.1;Name=WP_016192185.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012792.2;locus_tag=LU631_RS11625;product=GNAT family N-acetyltransferase;protein_id=WP_016192185.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2180796 2181257 . + . ID=gene-LU631_RS11630;Name=LU631_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11630;old_locus_tag=LU631_11630 NZ_CP089940.1 Protein Homology CDS 2180796 2181257 . + 0 ID=cds-WP_016192184.1;Parent=gene-LU631_RS11630;Dbxref=Genbank:WP_016192184.1;Name=WP_016192184.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025113.2;locus_tag=LU631_RS11630;product=IS5/IS1182 family transposase;protein_id=WP_016192184.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2181254 2181475 . - . ID=gene-LU631_RS11635;Name=LU631_RS11635;end_range=2181475,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11635;old_locus_tag=LU631_11635;partial=true;pseudo=true;start_range=.,2181254 NZ_CP089940.1 Protein Homology CDS 2181254 2181475 . - 0 ID=cds-LU631_RS11635;Parent=gene-LU631_RS11635;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2181475,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917256.1;locus_tag=LU631_RS11635;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,2181254;transl_table=11 NZ_CP089940.1 RefSeq gene 2182002 2183450 . + . ID=gene-LU631_RS11640;Name=LU631_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11640;old_locus_tag=LU631_11640 NZ_CP089940.1 Protein Homology CDS 2182002 2183450 . + 0 ID=cds-WP_016192182.1;Parent=gene-LU631_RS11640;Dbxref=Genbank:WP_016192182.1;Name=WP_016192182.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024846.2;locus_tag=LU631_RS11640;product=FAD/NAD(P)-binding protein;protein_id=WP_016192182.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2183465 2183641 . - . ID=gene-LU631_RS11645;Name=LU631_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11645;old_locus_tag=LU631_11645 NZ_CP089940.1 GeneMarkS-2+ CDS 2183465 2183641 . - 0 ID=cds-WP_233482016.1;Parent=gene-LU631_RS11645;Dbxref=Genbank:WP_233482016.1;Name=WP_233482016.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS11645;product=hypothetical protein;protein_id=WP_233482016.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2183742 2184341 . + . ID=gene-LU631_RS11650;Name=LU631_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11650;old_locus_tag=LU631_11650 NZ_CP089940.1 GeneMarkS-2+ CDS 2183742 2184341 . + 0 ID=cds-WP_233482017.1;Parent=gene-LU631_RS11650;Dbxref=Genbank:WP_233482017.1;Name=WP_233482017.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS11650;product=hypothetical protein;protein_id=WP_233482017.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2184437 2184733 . - . ID=gene-LU631_RS11655;Name=LU631_RS11655;end_range=2184733,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11655;old_locus_tag=LU631_11655;partial=true;pseudo=true;start_range=.,2184437 NZ_CP089940.1 Protein Homology CDS 2184437 2184733 . - 0 ID=cds-LU631_RS11655;Parent=gene-LU631_RS11655;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2184733,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU631_RS11655;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,2184437;transl_table=11 NZ_CP089940.1 RefSeq gene 2184817 2185455 . + . ID=gene-LU631_RS11660;Name=LU631_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11660;old_locus_tag=LU631_11660 NZ_CP089940.1 GeneMarkS-2+ CDS 2184817 2185455 . + 0 ID=cds-WP_046371994.1;Parent=gene-LU631_RS11660;Dbxref=Genbank:WP_046371994.1;Name=WP_046371994.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS11660;product=hypothetical protein;protein_id=WP_046371994.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2185501 2186198 . + . ID=gene-LU631_RS11665;Name=LU631_RS11665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11665;old_locus_tag=LU631_11665;pseudo=true NZ_CP089940.1 Protein Homology CDS 2185501 2186198 . + 0 ID=cds-LU631_RS11665;Parent=gene-LU631_RS11665;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS11665;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2186216 2186524 . - . ID=gene-LU631_RS11670;Name=LU631_RS11670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11670;old_locus_tag=LU631_11670;partial=true;pseudo=true;start_range=.,2186216 NZ_CP089940.1 Protein Homology CDS 2186216 2186524 . - 0 ID=cds-LU631_RS11670;Parent=gene-LU631_RS11670;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239317.1;locus_tag=LU631_RS11670;partial=true;product=site-specific DNA-methyltransferase;pseudo=true;start_range=.,2186216;transl_table=11 NZ_CP089940.1 RefSeq gene 2186939 2187979 . + . ID=gene-LU631_RS11675;Name=LU631_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11675;old_locus_tag=LU631_11675 NZ_CP089940.1 Protein Homology CDS 2186939 2187979 . + 0 ID=cds-WP_046371791.1-9;Parent=gene-LU631_RS11675;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS11675;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2188039 2189205 . - . ID=gene-LU631_RS11680;Name=LU631_RS11680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11680;old_locus_tag=LU631_11680;partial=true;pseudo=true;start_range=.,2188039 NZ_CP089940.1 Protein Homology CDS 2188039 2189205 . - 0 ID=cds-LU631_RS11680;Parent=gene-LU631_RS11680;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=LU631_RS11680;partial=true;product=integrase arm-type DNA-binding domain-containing protein;pseudo=true;start_range=.,2188039;transl_table=11 NZ_CP089940.1 RefSeq gene 2189637 2189885 . + . ID=gene-LU631_RS11685;Name=LU631_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11685;old_locus_tag=LU631_11685 NZ_CP089940.1 Protein Homology CDS 2189637 2189885 . + 0 ID=cds-WP_016192177.1;Parent=gene-LU631_RS11685;Dbxref=Genbank:WP_016192177.1;Name=WP_016192177.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039754.1;locus_tag=LU631_RS11685;product=DUF6387 family protein;protein_id=WP_016192177.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2190053 2190595 . + . ID=gene-LU631_RS11690;Name=LU631_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11690;old_locus_tag=LU631_11690 NZ_CP089940.1 Protein Homology CDS 2190053 2190595 . + 0 ID=cds-WP_016192176.1;Parent=gene-LU631_RS11690;Dbxref=Genbank:WP_016192176.1;Name=WP_016192176.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039754.1;locus_tag=LU631_RS11690;product=DUF6387 family protein;protein_id=WP_016192176.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2190745 2190933 . + . ID=gene-LU631_RS11695;Name=LU631_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11695;old_locus_tag=LU631_11695 NZ_CP089940.1 Protein Homology CDS 2190745 2190933 . + 0 ID=cds-WP_016192175.1;Parent=gene-LU631_RS11695;Dbxref=Genbank:WP_016192175.1;Name=WP_016192175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001092369.1;locus_tag=LU631_RS11695;product=AlpA family transcriptional regulator;protein_id=WP_016192175.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2190968 2191264 . + . ID=gene-LU631_RS11700;Name=LU631_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11700;old_locus_tag=LU631_11700 NZ_CP089940.1 GeneMarkS-2+ CDS 2190968 2191264 . + 0 ID=cds-WP_016192174.1;Parent=gene-LU631_RS11700;Dbxref=Genbank:WP_016192174.1;Name=WP_016192174.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS11700;product=hypothetical protein;protein_id=WP_016192174.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2191571 2192611 . - . ID=gene-LU631_RS11705;Name=LU631_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11705;old_locus_tag=LU631_11705 NZ_CP089940.1 Protein Homology CDS 2191571 2192611 . - 0 ID=cds-WP_046371995.1;Parent=gene-LU631_RS11705;Dbxref=Genbank:WP_046371995.1;Name=WP_046371995.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS11705;product=IS481 family transposase;protein_id=WP_046371995.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2193744 2194295 . + . ID=gene-LU631_RS11710;Name=LU631_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11710;old_locus_tag=LU631_11710 NZ_CP089940.1 Protein Homology CDS 2193744 2194295 . + 0 ID=cds-WP_016192173.1;Parent=gene-LU631_RS11710;Dbxref=Genbank:WP_016192173.1;Name=WP_016192173.1;Ontology_term=GO:0006260,GO:0006276;gbkey=CDS;go_process=DNA replication|0006260||IEA,plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764630.1;locus_tag=LU631_RS11710;product=replication/maintenance protein RepL;protein_id=WP_016192173.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2194485 2195768 . - . ID=gene-LU631_RS11715;Name=LU631_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11715;old_locus_tag=LU631_11715 NZ_CP089940.1 Protein Homology CDS 2194485 2195768 . - 0 ID=cds-WP_040465757.1;Parent=gene-LU631_RS11715;Dbxref=Genbank:WP_040465757.1;Name=WP_040465757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015854148.1;locus_tag=LU631_RS11715;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_040465757.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2195948 2196023 . - . ID=gene-LU631_RS11720;Name=LU631_RS11720;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS11720;old_locus_tag=LU631_11720 NZ_CP089940.1 tRNAscan-SE tRNA 2195948 2196023 . - . ID=rna-LU631_RS11720;Parent=gene-LU631_RS11720;anticodon=(pos:complement(2195988..2195990));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS11720;product=tRNA-Asn NZ_CP089940.1 tRNAscan-SE exon 2195948 2196023 . - . ID=exon-LU631_RS11720-1;Parent=rna-LU631_RS11720;anticodon=(pos:complement(2195988..2195990));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS11720;product=tRNA-Asn NZ_CP089940.1 RefSeq gene 2196442 2197893 . - . ID=gene-LU631_RS11725;Name=LU631_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11725;old_locus_tag=LU631_11725 NZ_CP089940.1 Protein Homology CDS 2196442 2197893 . - 0 ID=cds-WP_016192171.1;Parent=gene-LU631_RS11725;Dbxref=Genbank:WP_016192171.1;Name=WP_016192171.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667762.1;locus_tag=LU631_RS11725;product=AMP nucleosidase;protein_id=WP_016192171.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2198235 2199371 . - . ID=gene-LU631_RS11730;Name=LU631_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11730;old_locus_tag=LU631_11730 NZ_CP089940.1 Protein Homology CDS 2198235 2199371 . - 0 ID=cds-WP_016192169.1;Parent=gene-LU631_RS11730;Dbxref=Genbank:WP_016192169.1;Name=WP_016192169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010247153.1;locus_tag=LU631_RS11730;product=MFS transporter;protein_id=WP_016192169.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2200038 2201000 . + . ID=gene-LU631_RS11735;Name=cbl;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;locus_tag=LU631_RS11735;old_locus_tag=LU631_11735 NZ_CP089940.1 Protein Homology CDS 2200038 2201000 . + 0 ID=cds-WP_016192168.1;Parent=gene-LU631_RS11735;Dbxref=Genbank:WP_016192168.1;Name=WP_016192168.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cbl;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015583978.1;locus_tag=LU631_RS11735;product=HTH-type transcriptional regulator Cbl;protein_id=WP_016192168.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2201047 2201589 . + . ID=gene-LU631_RS11740;Name=LU631_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11740;old_locus_tag=LU631_11740 NZ_CP089940.1 Protein Homology CDS 2201047 2201589 . + 0 ID=cds-WP_016192167.1;Parent=gene-LU631_RS11740;Dbxref=Genbank:WP_016192167.1;Name=WP_016192167.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037026.2;locus_tag=LU631_RS11740;product=hypothetical protein;protein_id=WP_016192167.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2201898 2202335 . - . ID=gene-LU631_RS11745;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS11745;old_locus_tag=LU631_11745 NZ_CP089940.1 Protein Homology CDS 2201898 2202335 . - 0 ID=cds-WP_016192166.1;Parent=gene-LU631_RS11745;Dbxref=Genbank:WP_016192166.1;Name=WP_016192166.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS11745;product=IS200/IS605 family transposase;protein_id=WP_016192166.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2202500 2205781 . - . ID=gene-LU631_RS11750;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=LU631_RS11750;old_locus_tag=LU631_11750 NZ_CP089940.1 Protein Homology CDS 2202500 2205781 . - 0 ID=cds-WP_016192165.1;Parent=gene-LU631_RS11750;Dbxref=Genbank:WP_016192165.1;Name=WP_016192165.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157094.1;locus_tag=LU631_RS11750;product=ribonuclease E;protein_id=WP_016192165.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2206351 2207313 . + . ID=gene-LU631_RS11755;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=LU631_RS11755;old_locus_tag=LU631_11755 NZ_CP089940.1 Protein Homology CDS 2206351 2207313 . + 0 ID=cds-WP_016192164.1;Parent=gene-LU631_RS11755;Dbxref=Genbank:WP_016192164.1;Name=WP_016192164.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201672.1;locus_tag=LU631_RS11755;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_016192164.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2207356 2207940 . - . ID=gene-LU631_RS11760;Name=LU631_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11760;old_locus_tag=LU631_11760 NZ_CP089940.1 Protein Homology CDS 2207356 2207940 . - 0 ID=cds-WP_016192163.1;Parent=gene-LU631_RS11760;Dbxref=Genbank:WP_016192163.1;Name=WP_016192163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001125202.1;locus_tag=LU631_RS11760;product=Maf family protein;protein_id=WP_016192163.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2208083 2208604 . + . ID=gene-LU631_RS11765;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=LU631_RS11765;old_locus_tag=LU631_11765 NZ_CP089940.1 Protein Homology CDS 2208083 2208604 . + 0 ID=cds-WP_016192162.1;Parent=gene-LU631_RS11765;Dbxref=Genbank:WP_016192162.1;Name=WP_016192162.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=LU631_RS11765;product=23S rRNA accumulation protein YceD;protein_id=WP_016192162.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2208619 2208789 . + . ID=gene-LU631_RS11770;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=LU631_RS11770;old_locus_tag=LU631_11770 NZ_CP089940.1 Protein Homology CDS 2208619 2208789 . + 0 ID=cds-WP_016192161.1;Parent=gene-LU631_RS11770;Dbxref=Genbank:WP_016192161.1;Name=WP_016192161.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147057.1;locus_tag=LU631_RS11770;product=50S ribosomal protein L32;protein_id=WP_016192161.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2208813 2209847 . + . ID=gene-LU631_RS11775;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=LU631_RS11775;old_locus_tag=LU631_11775 NZ_CP089940.1 Protein Homology CDS 2208813 2209847 . + 0 ID=cds-WP_016192160.1;Parent=gene-LU631_RS11775;Dbxref=Genbank:WP_016192160.1;Name=WP_016192160.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157104.1;locus_tag=LU631_RS11775;product=phosphate acyltransferase PlsX;protein_id=WP_016192160.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2209854 2210807 . + . ID=gene-LU631_RS11780;Name=LU631_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11780;old_locus_tag=LU631_11780 NZ_CP089940.1 Protein Homology CDS 2209854 2210807 . + 0 ID=cds-WP_016192159.1;Parent=gene-LU631_RS11780;Dbxref=Genbank:WP_016192159.1;Name=WP_016192159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011093371.1;locus_tag=LU631_RS11780;product=ketoacyl-ACP synthase III;protein_id=WP_016192159.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2210824 2211747 . + . ID=gene-LU631_RS11785;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=LU631_RS11785;old_locus_tag=LU631_11785 NZ_CP089940.1 Protein Homology CDS 2210824 2211747 . + 0 ID=cds-WP_016192158.1;Parent=gene-LU631_RS11785;Dbxref=Genbank:WP_016192158.1;Name=WP_016192158.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201678.1;locus_tag=LU631_RS11785;product=ACP S-malonyltransferase;protein_id=WP_016192158.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2211769 2212503 . + . ID=gene-LU631_RS11790;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LU631_RS11790;old_locus_tag=LU631_11790 NZ_CP089940.1 Protein Homology CDS 2211769 2212503 . + 0 ID=cds-WP_016192157.1;Parent=gene-LU631_RS11790;Dbxref=Genbank:WP_016192157.1;Name=WP_016192157.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=LU631_RS11790;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_016192157.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2212658 2212894 . + . ID=gene-LU631_RS11795;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=LU631_RS11795;old_locus_tag=LU631_11795 NZ_CP089940.1 Protein Homology CDS 2212658 2212894 . + 0 ID=cds-WP_016192156.1;Parent=gene-LU631_RS11795;Dbxref=Genbank:WP_016192156.1;Name=WP_016192156.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=LU631_RS11795;product=acyl carrier protein;protein_id=WP_016192156.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2212978 2214219 . + . ID=gene-LU631_RS11800;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LU631_RS11800;old_locus_tag=LU631_11800 NZ_CP089940.1 Protein Homology CDS 2212978 2214219 . + 0 ID=cds-WP_016192155.1;Parent=gene-LU631_RS11800;Dbxref=Genbank:WP_016192155.1;Name=WP_016192155.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=LU631_RS11800;product=beta-ketoacyl-ACP synthase II;protein_id=WP_016192155.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2214456 2215250 . + . ID=gene-LU631_RS11805;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=LU631_RS11805;old_locus_tag=LU631_11805 NZ_CP089940.1 Protein Homology CDS 2214456 2215250 . + 0 ID=cds-WP_016192154.1;Parent=gene-LU631_RS11805;Dbxref=Genbank:WP_016192154.1;Name=WP_016192154.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118835.1;locus_tag=LU631_RS11805;product=aminodeoxychorismate lyase;protein_id=WP_016192154.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2215262 2216281 . + . ID=gene-LU631_RS11810;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=LU631_RS11810;old_locus_tag=LU631_11810 NZ_CP089940.1 Protein Homology CDS 2215262 2216281 . + 0 ID=cds-WP_016192153.1;Parent=gene-LU631_RS11810;Dbxref=Genbank:WP_016192153.1;Name=WP_016192153.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593430.1;locus_tag=LU631_RS11810;product=cell division protein YceG;protein_id=WP_016192153.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2216271 2216903 . + . ID=gene-LU631_RS11815;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=LU631_RS11815;old_locus_tag=LU631_11815 NZ_CP089940.1 Protein Homology CDS 2216271 2216903 . + 0 ID=cds-WP_016192152.1;Parent=gene-LU631_RS11815;Dbxref=Genbank:WP_016192152.1;Name=WP_016192152.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157127.1;locus_tag=LU631_RS11815;product=dTMP kinase;protein_id=WP_016192152.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2216900 2217895 . + . ID=gene-LU631_RS11820;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=LU631_RS11820;old_locus_tag=LU631_11820 NZ_CP089940.1 Protein Homology CDS 2216900 2217895 . + 0 ID=cds-WP_016192151.1;Parent=gene-LU631_RS11820;Dbxref=Genbank:WP_016192151.1;Name=WP_016192151.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holB;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543996.1;locus_tag=LU631_RS11820;product=DNA polymerase III subunit delta';protein_id=WP_016192151.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2217906 2218700 . + . ID=gene-LU631_RS11825;Name=LU631_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11825;old_locus_tag=LU631_11825 NZ_CP089940.1 Protein Homology CDS 2217906 2218700 . + 0 ID=cds-WP_016192150.1;Parent=gene-LU631_RS11825;Dbxref=Genbank:WP_016192150.1;Name=WP_016192150.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157131.1;locus_tag=LU631_RS11825;product=metal-dependent hydrolase;protein_id=WP_016192150.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2218958 2220391 . + . ID=gene-LU631_RS11830;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=LU631_RS11830;old_locus_tag=LU631_11830 NZ_CP089940.1 Protein Homology CDS 2218958 2220391 . + 0 ID=cds-WP_016192149.1;Parent=gene-LU631_RS11830;Dbxref=Genbank:WP_016192149.1;Name=WP_016192149.1;Ontology_term=GO:0009401,GO:1904659,GO:0005355,GO:0008982;gbkey=CDS;gene=ptsG;go_function=glucose transmembrane transporter activity|0005355||IEA,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849857.1;locus_tag=LU631_RS11830;product=PTS glucose transporter subunit IIBC;protein_id=WP_016192149.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2220582 2220932 . + . ID=gene-LU631_RS11835;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=LU631_RS11835;old_locus_tag=LU631_11835 NZ_CP089940.1 Protein Homology CDS 2220582 2220932 . + 0 ID=cds-WP_016192148.1;Parent=gene-LU631_RS11835;Dbxref=Genbank:WP_016192148.1;Name=WP_016192148.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157136.1;locus_tag=LU631_RS11835;product=purine nucleoside phosphoramidase;protein_id=WP_016192148.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2220982 2221329 . + . ID=gene-LU631_RS11840;Name=LU631_RS11840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11840;old_locus_tag=LU631_11840;pseudo=true NZ_CP089940.1 Protein Homology CDS 2220982 2221329 . + 0 ID=cds-LU631_RS11840;Parent=gene-LU631_RS11840;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010669861.1;locus_tag=LU631_RS11840;product=YcfL family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2221371 2221937 . + . ID=gene-LU631_RS11845;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=LU631_RS11845;old_locus_tag=LU631_11845 NZ_CP089940.1 Protein Homology CDS 2221371 2221937 . + 0 ID=cds-WP_198292542.1;Parent=gene-LU631_RS11845;Dbxref=Genbank:WP_198292542.1;Name=WP_198292542.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017801890.1;locus_tag=LU631_RS11845;product=penicillin-binding protein activator LpoB;protein_id=WP_198292542.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2221897 2222766 . + . ID=gene-LU631_RS11850;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=LU631_RS11850;old_locus_tag=LU631_11850 NZ_CP089940.1 Protein Homology CDS 2221897 2222766 . + 0 ID=cds-WP_232426898.1;Parent=gene-LU631_RS11850;Dbxref=Genbank:WP_232426898.1;Name=WP_232426898.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441734.1;locus_tag=LU631_RS11850;product=thiamine kinase;protein_id=WP_232426898.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2222776 2223804 . + . ID=gene-LU631_RS11855;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=LU631_RS11855;old_locus_tag=LU631_11855 NZ_CP089940.1 Protein Homology CDS 2222776 2223804 . + 0 ID=cds-WP_040465733.1;Parent=gene-LU631_RS11855;Dbxref=Genbank:WP_040465733.1;Name=WP_040465733.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201692.1;locus_tag=LU631_RS11855;product=beta-N-acetylhexosaminidase;protein_id=WP_040465733.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2223833 2224393 . + . ID=gene-LU631_RS11860;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=LU631_RS11860;old_locus_tag=LU631_11860 NZ_CP089940.1 Protein Homology CDS 2223833 2224393 . + 0 ID=cds-WP_016192143.1;Parent=gene-LU631_RS11860;Dbxref=Genbank:WP_016192143.1;Name=WP_016192143.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012765221.1;locus_tag=LU631_RS11860;product=alpha/beta hydrolase YcfP;protein_id=WP_016192143.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2224453 2225301 . + . ID=gene-LU631_RS11865;Name=LU631_RS11865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11865;old_locus_tag=LU631_11865;pseudo=true NZ_CP089940.1 Protein Homology CDS 2224453 2225301 . + 0 ID=cds-LU631_RS11865;Parent=gene-LU631_RS11865;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS11865;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2225636 2226928 . + . ID=gene-LU631_RS11870;Name=LU631_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11870;old_locus_tag=LU631_11870 NZ_CP089940.1 Protein Homology CDS 2225636 2226928 . + 0 ID=cds-WP_040465732.1;Parent=gene-LU631_RS11870;Dbxref=Genbank:WP_040465732.1;Name=WP_040465732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373018.1;locus_tag=LU631_RS11870;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_040465732.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2227214 2227753 . + . ID=gene-LU631_RS11875;Name=LU631_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11875;old_locus_tag=LU631_11875 NZ_CP089940.1 Protein Homology CDS 2227214 2227753 . + 0 ID=cds-WP_016192140.1;Parent=gene-LU631_RS11875;Dbxref=Genbank:WP_016192140.1;Name=WP_016192140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121097.1;locus_tag=LU631_RS11875;product=glycine zipper 2TM domain-containing protein;protein_id=WP_016192140.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2228340 2231783 . - . ID=gene-LU631_RS11880;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=LU631_RS11880;old_locus_tag=LU631_11880 NZ_CP089940.1 Protein Homology CDS 2228340 2231783 . - 0 ID=cds-WP_016192139.1;Parent=gene-LU631_RS11880;Dbxref=Genbank:WP_016192139.1;Name=WP_016192139.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201696.1;locus_tag=LU631_RS11880;product=transcription-repair coupling factor;protein_id=WP_016192139.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2231866 2232047 . - . ID=gene-LU631_RS11885;Name=LU631_RS11885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11885;old_locus_tag=LU631_11885;pseudo=true NZ_CP089940.1 Protein Homology CDS 2231866 2232047 . - 0 ID=cds-LU631_RS11885;Parent=gene-LU631_RS11885;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008103029.1;locus_tag=LU631_RS11885;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2232373 2232626 . + . ID=gene-LU631_RS11890;Name=LU631_RS11890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11890;old_locus_tag=LU631_11890;partial=true;pseudo=true;start_range=.,2232373 NZ_CP089940.1 Protein Homology CDS 2232373 2232626 . + 0 ID=cds-LU631_RS11890;Parent=gene-LU631_RS11890;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191199.1;locus_tag=LU631_RS11890;partial=true;product=recombination protein NinB;pseudo=true;start_range=.,2232373;transl_table=11 NZ_CP089940.1 RefSeq gene 2232974 2233399 . + . ID=gene-LU631_RS11895;Name=LU631_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11895;old_locus_tag=LU631_11895 NZ_CP089940.1 Protein Homology CDS 2232974 2233399 . + 0 ID=cds-WP_016192137.1;Parent=gene-LU631_RS11895;Dbxref=Genbank:WP_016192137.1;Name=WP_016192137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118707.1;locus_tag=LU631_RS11895;product=antitermination protein;protein_id=WP_016192137.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2233438 2233605 . - . ID=gene-LU631_RS11900;Name=LU631_RS11900;end_range=2233605,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11900;old_locus_tag=LU631_11900;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2233438 2233605 . - 0 ID=cds-LU631_RS11900;Parent=gene-LU631_RS11900;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2233605,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS11900;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2233927 2235584 . - . ID=gene-LU631_RS11905;Name=LU631_RS11905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11905;old_locus_tag=LU631_11905;pseudo=true NZ_CP089940.1 Protein Homology CDS 2233927 2235584 . - 0 ID=cds-LU631_RS11905;Parent=gene-LU631_RS11905;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229104.1;locus_tag=LU631_RS11905;product=terminase large subunit;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2235568 2235876 . - . ID=gene-LU631_RS11910;Name=LU631_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11910;old_locus_tag=LU631_11910 NZ_CP089940.1 Protein Homology CDS 2235568 2235876 . - 0 ID=cds-WP_046371996.1;Parent=gene-LU631_RS11910;Dbxref=Genbank:WP_046371996.1;Name=WP_046371996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309624.1;locus_tag=LU631_RS11910;product=phage terminase small subunit P27 family;protein_id=WP_046371996.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2235894 2236010 . - . ID=gene-LU631_RS11915;Name=LU631_RS11915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11915;old_locus_tag=LU631_11915;partial=true;pseudo=true;start_range=.,2235894 NZ_CP089940.1 Protein Homology CDS 2235894 2236010 . - 0 ID=cds-LU631_RS11915;Parent=gene-LU631_RS11915;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077814.1;locus_tag=LU631_RS11915;partial=true;product=phage major capsid protein;pseudo=true;start_range=.,2235894;transl_table=11 NZ_CP089940.1 RefSeq gene 2236276 2236973 . - . ID=gene-LU631_RS11920;Name=LU631_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11920;old_locus_tag=LU631_11920 NZ_CP089940.1 Protein Homology CDS 2236724 2236973 . - 0 ID=cds-WP_233482018.1;Parent=gene-LU631_RS11920;Dbxref=Genbank:WP_233482018.1;Name=WP_233482018.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS11920;product=IS1 family transposase;protein_id=WP_233482018.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 2236276 2236724 . - 2 ID=cds-WP_233482018.1;Parent=gene-LU631_RS11920;Dbxref=Genbank:WP_233482018.1;Name=WP_233482018.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS11920;product=IS1 family transposase;protein_id=WP_233482018.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2237072 2237461 . - . ID=gene-LU631_RS11925;Name=LU631_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11925;old_locus_tag=LU631_11925 NZ_CP089940.1 GeneMarkS-2+ CDS 2237072 2237461 . - 0 ID=cds-WP_016192132.1;Parent=gene-LU631_RS11925;Dbxref=Genbank:WP_016192132.1;Name=WP_016192132.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS11925;product=hypothetical protein;protein_id=WP_016192132.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2237458 2238474 . - . ID=gene-LU631_RS11930;Name=LU631_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11930;old_locus_tag=LU631_11930 NZ_CP089940.1 Protein Homology CDS 2237458 2238474 . - 0 ID=cds-WP_016192131.1;Parent=gene-LU631_RS11930;Dbxref=Genbank:WP_016192131.1;Name=WP_016192131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667633.1;locus_tag=LU631_RS11930;product=membrane protein;protein_id=WP_016192131.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2238745 2238978 . + . ID=gene-LU631_RS11935;Name=LU631_RS11935;end_range=2238978,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11935;old_locus_tag=LU631_11935;partial=true;pseudo=true;start_range=.,2238745 NZ_CP089940.1 Protein Homology CDS 2238745 2238978 . + 0 ID=cds-LU631_RS11935;Parent=gene-LU631_RS11935;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2238978,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010245123.1;locus_tag=LU631_RS11935;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2238745;transl_table=11 NZ_CP089940.1 RefSeq gene 2238967 2239125 . + . ID=gene-LU631_RS11940;Name=LU631_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11940;old_locus_tag=LU631_11940 NZ_CP089940.1 Protein Homology CDS 2238967 2239125 . + 0 ID=cds-WP_232426905.1;Parent=gene-LU631_RS11940;Dbxref=Genbank:WP_232426905.1;Name=WP_232426905.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: protein motif:HMM:NF018262.2;locus_tag=LU631_RS11940;product=antiterminator Q family protein;protein_id=WP_232426905.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2239159 2239563 . - . ID=gene-LU631_RS11945;Name=LU631_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11945;old_locus_tag=LU631_11945 NZ_CP089940.1 Protein Homology CDS 2239159 2239563 . - 0 ID=cds-WP_016192129.1;Parent=gene-LU631_RS11945;Dbxref=Genbank:WP_016192129.1;Name=WP_016192129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667635.1;locus_tag=LU631_RS11945;product=hypothetical protein;protein_id=WP_016192129.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2239565 2240563 . - . ID=gene-LU631_RS11950;Name=LU631_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11950;old_locus_tag=LU631_11950 NZ_CP089940.1 Protein Homology CDS 2239565 2240563 . - 0 ID=cds-WP_016192128.1;Parent=gene-LU631_RS11950;Dbxref=Genbank:WP_016192128.1;Name=WP_016192128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014538763.1;locus_tag=LU631_RS11950;product=hypothetical protein;protein_id=WP_016192128.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2240834 2241157 . + . ID=gene-LU631_RS11955;Name=LU631_RS11955;end_range=2241157,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11955;old_locus_tag=LU631_11955;partial=true;pseudo=true;start_range=.,2240834 NZ_CP089940.1 Protein Homology CDS 2240834 2241157 . + 0 ID=cds-LU631_RS11955;Parent=gene-LU631_RS11955;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2241157,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010245123.1;locus_tag=LU631_RS11955;partial=true;product=phage tail protein;pseudo=true;start_range=.,2240834;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2241236 2241683 . + . ID=gene-LU631_RS11960;Name=LU631_RS11960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS11960;old_locus_tag=LU631_11960;partial=true;pseudo=true;start_range=.,2241236 NZ_CP089940.1 Protein Homology CDS 2241236 2241683 . + 0 ID=cds-LU631_RS11960;Parent=gene-LU631_RS11960;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917256.1;locus_tag=LU631_RS11960;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,2241236;transl_table=11 NZ_CP089940.1 RefSeq gene 2241721 2242565 . + . ID=gene-LU631_RS11965;Name=LU631_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11965;old_locus_tag=LU631_11965 NZ_CP089940.1 Protein Homology CDS 2241721 2242066 . + 0 ID=cds-WP_087949720.1;Parent=gene-LU631_RS11965;Dbxref=Genbank:WP_087949720.1;Name=WP_087949720.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611197.1;locus_tag=LU631_RS11965;product=IS5 family transposase;protein_id=WP_087949720.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 2242066 2242565 . + 2 ID=cds-WP_087949720.1;Parent=gene-LU631_RS11965;Dbxref=Genbank:WP_087949720.1;Name=WP_087949720.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611197.1;locus_tag=LU631_RS11965;product=IS5 family transposase;protein_id=WP_087949720.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2242923 2244122 . + . ID=gene-LU631_RS11970;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=LU631_RS11970;old_locus_tag=LU631_11970 NZ_CP089940.1 Protein Homology CDS 2242923 2244122 . + 0 ID=cds-WP_016192123.1;Parent=gene-LU631_RS11970;Dbxref=Genbank:WP_016192123.1;Name=WP_016192123.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309521.1;locus_tag=LU631_RS11970;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_016192123.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2244115 2244819 . + . ID=gene-LU631_RS11975;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=LU631_RS11975;old_locus_tag=LU631_11975 NZ_CP089940.1 Protein Homology CDS 2244115 2244819 . + 0 ID=cds-WP_016192122.1;Parent=gene-LU631_RS11975;Dbxref=Genbank:WP_016192122.1;Name=WP_016192122.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007885730.1;locus_tag=LU631_RS11975;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_016192122.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2244819 2246063 . + . ID=gene-LU631_RS11980;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=LU631_RS11980;old_locus_tag=LU631_11980 NZ_CP089940.1 Protein Homology CDS 2244819 2246063 . + 0 ID=cds-WP_016192121.1;Parent=gene-LU631_RS11980;Dbxref=Genbank:WP_016192121.1;Name=WP_016192121.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007898419.1;locus_tag=LU631_RS11980;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_016192121.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2246114 2246947 . + . ID=gene-LU631_RS11985;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=LU631_RS11985;old_locus_tag=LU631_11985 NZ_CP089940.1 Protein Homology CDS 2246114 2246947 . + 0 ID=cds-WP_040465752.1;Parent=gene-LU631_RS11985;Dbxref=Genbank:WP_040465752.1;Name=WP_040465752.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201702.1;locus_tag=LU631_RS11985;product=NAD-dependent protein deacylase;protein_id=WP_040465752.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2246998 2247861 . - . ID=gene-LU631_RS11990;Name=LU631_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11990;old_locus_tag=LU631_11990 NZ_CP089940.1 Protein Homology CDS 2246998 2247861 . - 0 ID=cds-WP_016192119.1;Parent=gene-LU631_RS11990;Dbxref=Genbank:WP_016192119.1;Name=WP_016192119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480208.1;locus_tag=LU631_RS11990;product=metal ABC transporter permease;protein_id=WP_016192119.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2247858 2248724 . - . ID=gene-LU631_RS11995;Name=LU631_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS11995;old_locus_tag=LU631_11995 NZ_CP089940.1 Protein Homology CDS 2247858 2248724 . - 0 ID=cds-WP_087949726.1;Parent=gene-LU631_RS11995;Dbxref=Genbank:WP_087949726.1;Name=WP_087949726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854338.1;locus_tag=LU631_RS11995;product=metal ABC transporter permease;protein_id=WP_087949726.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2248729 2249538 . - . ID=gene-LU631_RS12000;Name=LU631_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12000;old_locus_tag=LU631_12000 NZ_CP089940.1 Protein Homology CDS 2248729 2249538 . - 0 ID=cds-WP_016192117.1;Parent=gene-LU631_RS12000;Dbxref=Genbank:WP_016192117.1;Name=WP_016192117.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170119.1;locus_tag=LU631_RS12000;product=manganese/iron ABC transporter ATP-binding protein;protein_id=WP_016192117.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2249535 2250452 . - . ID=gene-LU631_RS12005;Name=LU631_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12005;old_locus_tag=LU631_12005 NZ_CP089940.1 Protein Homology CDS 2249535 2250452 . - 0 ID=cds-WP_016192116.1;Parent=gene-LU631_RS12005;Dbxref=Genbank:WP_016192116.1;Name=WP_016192116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211842.1;locus_tag=LU631_RS12005;product=metal ABC transporter substrate-binding protein;protein_id=WP_016192116.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2250644 2251783 . - . ID=gene-LU631_RS12010;Name=LU631_RS12010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12010;old_locus_tag=LU631_12010;pseudo=true NZ_CP089940.1 Protein Homology CDS 2250644 2251783 . - 0 ID=cds-LU631_RS12010;Parent=gene-LU631_RS12010;Note=frameshifted%3B internal stop;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892690.1;locus_tag=LU631_RS12010;product=benzoate/H(+) symporter BenE family transporter;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2251901 2252439 . + . ID=gene-LU631_RS12015;Name=LU631_RS12015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12015;old_locus_tag=LU631_12015;pseudo=true NZ_CP089940.1 Protein Homology CDS 2251901 2252439 . + 0 ID=cds-LU631_RS12015;Parent=gene-LU631_RS12015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013366384.1;locus_tag=LU631_RS12015;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2252536 2253771 . + . ID=gene-LU631_RS12020;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=LU631_RS12020;old_locus_tag=LU631_12020 NZ_CP089940.1 Protein Homology CDS 2252536 2253771 . + 0 ID=cds-WP_016192112.1;Parent=gene-LU631_RS12020;Dbxref=Genbank:WP_016192112.1;Name=WP_016192112.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389787.1;locus_tag=LU631_RS12020;product=peptidase T;protein_id=WP_016192112.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2253871 2254998 . - . ID=gene-LU631_RS12025;Name=LU631_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12025;old_locus_tag=LU631_12025 NZ_CP089940.1 Protein Homology CDS 2253871 2254998 . - 0 ID=cds-WP_016192111.1;Parent=gene-LU631_RS12025;Dbxref=Genbank:WP_016192111.1;Name=WP_016192111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157195.1;locus_tag=LU631_RS12025;product=cupin domain-containing protein;protein_id=WP_016192111.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2255091 2256551 . - . ID=gene-LU631_RS12030;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=LU631_RS12030;old_locus_tag=LU631_12030 NZ_CP089940.1 Protein Homology CDS 2255091 2256551 . - 0 ID=cds-WP_016192110.1;Parent=gene-LU631_RS12030;Dbxref=Genbank:WP_016192110.1;Name=WP_016192110.1;Ontology_term=GO:0000160,GO:0000155,GO:0004673,GO:0016772;gbkey=CDS;gene=phoQ;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201711.1;locus_tag=LU631_RS12030;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_016192110.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2256556 2257227 . - . ID=gene-LU631_RS12035;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=LU631_RS12035;old_locus_tag=LU631_12035 NZ_CP089940.1 Protein Homology CDS 2256556 2257227 . - 0 ID=cds-WP_198292541.1;Parent=gene-LU631_RS12035;Dbxref=Genbank:WP_198292541.1;Name=WP_198292541.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000986522.1;locus_tag=LU631_RS12035;product=two-component system response regulator PhoP;protein_id=WP_198292541.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2257348 2258718 . - . ID=gene-LU631_RS12040;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=LU631_RS12040;old_locus_tag=LU631_12040 NZ_CP089940.1 Protein Homology CDS 2257348 2258718 . - 0 ID=cds-WP_016192108.1;Parent=gene-LU631_RS12040;Dbxref=Genbank:WP_016192108.1;Name=WP_016192108.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226316.1;locus_tag=LU631_RS12040;product=adenylosuccinate lyase;protein_id=WP_016192108.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2258739 2259383 . - . ID=gene-LU631_RS12045;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=LU631_RS12045;old_locus_tag=LU631_12045 NZ_CP089940.1 Protein Homology CDS 2258739 2259383 . - 0 ID=cds-WP_016192107.1;Parent=gene-LU631_RS12045;Dbxref=Genbank:WP_016192107.1;Name=WP_016192107.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157200.1;locus_tag=LU631_RS12045;product=high frequency lysogenization protein HflD;protein_id=WP_016192107.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2259444 2260547 . - . ID=gene-LU631_RS12050;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=LU631_RS12050;old_locus_tag=LU631_12050 NZ_CP089940.1 Protein Homology CDS 2259444 2260547 . - 0 ID=cds-WP_016192106.1;Parent=gene-LU631_RS12050;Dbxref=Genbank:WP_016192106.1;Name=WP_016192106.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201715.1;locus_tag=LU631_RS12050;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_016192106.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2260606 2261082 . - . ID=gene-LU631_RS12055;Name=LU631_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12055;old_locus_tag=LU631_12055 NZ_CP089940.1 Protein Homology CDS 2260606 2261082 . - 0 ID=cds-WP_016192105.1;Parent=gene-LU631_RS12055;Dbxref=Genbank:WP_016192105.1;Name=WP_016192105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157202.1;locus_tag=LU631_RS12055;product=NUDIX hydrolase;protein_id=WP_016192105.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2261113 2261775 . - . ID=gene-LU631_RS12060;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=LU631_RS12060;old_locus_tag=LU631_12060 NZ_CP089940.1 Protein Homology CDS 2261113 2261775 . - 0 ID=cds-WP_016192104.1;Parent=gene-LU631_RS12060;Dbxref=Genbank:WP_016192104.1;Name=WP_016192104.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169523.1;locus_tag=LU631_RS12060;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_016192104.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2261877 2263127 . + . ID=gene-LU631_RS12065;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=LU631_RS12065;old_locus_tag=LU631_12065 NZ_CP089940.1 Protein Homology CDS 2261877 2263127 . + 0 ID=cds-WP_016192103.1;Parent=gene-LU631_RS12065;Dbxref=Genbank:WP_016192103.1;Name=WP_016192103.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226321.1;locus_tag=LU631_RS12065;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_016192103.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2263249 2264382 . - . ID=gene-LU631_RS12070;Name=LU631_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12070;old_locus_tag=LU631_12070 NZ_CP089940.1 Protein Homology CDS 2263249 2264382 . - 0 ID=cds-WP_016192102.1;Parent=gene-LU631_RS12070;Dbxref=Genbank:WP_016192102.1;Name=WP_016192102.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015461745.1;locus_tag=LU631_RS12070;product=site-specific integrase;protein_id=WP_016192102.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2264357 2264608 . - . ID=gene-LU631_RS12075;Name=LU631_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12075;old_locus_tag=LU631_12075 NZ_CP089940.1 Protein Homology CDS 2264357 2264608 . - 0 ID=cds-WP_016192101.1;Parent=gene-LU631_RS12075;Dbxref=Genbank:WP_016192101.1;Name=WP_016192101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544044.1;locus_tag=LU631_RS12075;product=excisionase;protein_id=WP_016192101.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2264675 2266315 . - . ID=gene-LU631_RS12080;Name=LU631_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12080;old_locus_tag=LU631_12080 NZ_CP089940.1 Protein Homology CDS 2264675 2266315 . - 0 ID=cds-WP_046371999.1;Parent=gene-LU631_RS12080;Dbxref=Genbank:WP_046371999.1;Name=WP_046371999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118869.1;locus_tag=LU631_RS12080;product=DUF4942 domain-containing protein;protein_id=WP_046371999.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2266312 2267088 . - . ID=gene-LU631_RS12085;Name=LU631_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12085;old_locus_tag=LU631_12085 NZ_CP089940.1 GeneMarkS-2+ CDS 2266312 2267088 . - 0 ID=cds-WP_052734704.1;Parent=gene-LU631_RS12085;Dbxref=Genbank:WP_052734704.1;Name=WP_052734704.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS12085;product=hypothetical protein;protein_id=WP_052734704.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2267085 2267309 . - . ID=gene-LU631_RS12090;Name=LU631_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12090;old_locus_tag=LU631_12090 NZ_CP089940.1 Protein Homology CDS 2267085 2267309 . - 0 ID=cds-WP_046372000.1;Parent=gene-LU631_RS12090;Dbxref=Genbank:WP_046372000.1;Name=WP_046372000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236813.1;locus_tag=LU631_RS12090;product=hypothetical protein;protein_id=WP_046372000.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2267302 2267709 . - . ID=gene-LU631_RS12095;Name=LU631_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12095;old_locus_tag=LU631_12095 NZ_CP089940.1 GeneMarkS-2+ CDS 2267302 2267709 . - 0 ID=cds-WP_046372001.1;Parent=gene-LU631_RS12095;Dbxref=Genbank:WP_046372001.1;Name=WP_046372001.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS12095;product=hypothetical protein;protein_id=WP_046372001.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2267853 2268665 . - . ID=gene-LU631_RS12100;Name=LU631_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12100;old_locus_tag=LU631_12100 NZ_CP089940.1 GeneMarkS-2+ CDS 2267853 2268665 . - 0 ID=cds-WP_016192100.1;Parent=gene-LU631_RS12100;Dbxref=Genbank:WP_016192100.1;Name=WP_016192100.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS12100;product=hypothetical protein;protein_id=WP_016192100.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2268671 2269468 . - . ID=gene-LU631_RS12105;Name=LU631_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12105;old_locus_tag=LU631_12105 NZ_CP089940.1 Protein Homology CDS 2268671 2269468 . - 0 ID=cds-WP_040465749.1;Parent=gene-LU631_RS12105;Dbxref=Genbank:WP_040465749.1;Name=WP_040465749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017346158.1;locus_tag=LU631_RS12105;product=PD-(D/E)XK nuclease-like domain-containing protein;protein_id=WP_040465749.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2271179 2271514 . - . ID=gene-LU631_RS12110;Name=LU631_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12110;old_locus_tag=LU631_12110 NZ_CP089940.1 GeneMarkS-2+ CDS 2271179 2271514 . - 0 ID=cds-WP_016192098.1;Parent=gene-LU631_RS12110;Dbxref=Genbank:WP_016192098.1;Name=WP_016192098.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS12110;product=hypothetical protein;protein_id=WP_016192098.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2271585 2271779 . - . ID=gene-LU631_RS12115;Name=LU631_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12115;old_locus_tag=LU631_12115 NZ_CP089940.1 Protein Homology CDS 2271585 2271779 . - 0 ID=cds-WP_016192097.1;Parent=gene-LU631_RS12115;Dbxref=Genbank:WP_016192097.1;Name=WP_016192097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544050.1;locus_tag=LU631_RS12115;product=cell division protein FtsZ;protein_id=WP_016192097.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2272161 2272376 . - . ID=gene-LU631_RS12120;Name=LU631_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12120;old_locus_tag=LU631_12120 NZ_CP089940.1 Protein Homology CDS 2272161 2272376 . - 0 ID=cds-WP_016192096.1;Parent=gene-LU631_RS12120;Dbxref=Genbank:WP_016192096.1;Name=WP_016192096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005966.1;locus_tag=LU631_RS12120;product=hypothetical protein;protein_id=WP_016192096.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2272554 2272955 . - . ID=gene-LU631_RS12125;Name=LU631_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12125;old_locus_tag=LU631_12125 NZ_CP089940.1 Protein Homology CDS 2272554 2272955 . - 0 ID=cds-WP_016192921.1;Parent=gene-LU631_RS12125;Dbxref=Genbank:WP_016192921.1;Name=WP_016192921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192921.1;locus_tag=LU631_RS12125;product=helix-turn-helix domain-containing protein;protein_id=WP_016192921.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2273039 2273272 . + . ID=gene-LU631_RS12130;Name=LU631_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12130;old_locus_tag=LU631_12130 NZ_CP089940.1 Protein Homology CDS 2273039 2273272 . + 0 ID=cds-WP_016192920.1;Parent=gene-LU631_RS12130;Dbxref=Genbank:WP_016192920.1;Name=WP_016192920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544053.1;locus_tag=LU631_RS12130;product=Cro/CI family transcriptional regulator;protein_id=WP_016192920.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2273250 2273738 . + . ID=gene-LU631_RS12135;Name=LU631_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12135;old_locus_tag=LU631_12135 NZ_CP089940.1 Protein Homology CDS 2273250 2273738 . + 0 ID=cds-WP_016192919.1;Parent=gene-LU631_RS12135;Dbxref=Genbank:WP_016192919.1;Name=WP_016192919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728352.1;locus_tag=LU631_RS12135;product=toxin YdaT family protein;protein_id=WP_016192919.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2273745 2273930 . - . ID=gene-LU631_RS12140;Name=LU631_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12140;old_locus_tag=LU631_12140 NZ_CP089940.1 GeneMarkS-2+ CDS 2273745 2273930 . - 0 ID=cds-WP_016192918.1;Parent=gene-LU631_RS12140;Dbxref=Genbank:WP_016192918.1;Name=WP_016192918.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS12140;product=hypothetical protein;protein_id=WP_016192918.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2274198 2274911 . + . ID=gene-LU631_RS12145;Name=LU631_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12145;old_locus_tag=LU631_12145 NZ_CP089940.1 Protein Homology CDS 2274198 2274911 . + 0 ID=cds-WP_051124415.1;Parent=gene-LU631_RS12145;Dbxref=Genbank:WP_051124415.1;Name=WP_051124415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003832312.1;locus_tag=LU631_RS12145;product=hypothetical protein;protein_id=WP_051124415.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2274914 2275660 . + . ID=gene-LU631_RS12150;Name=LU631_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12150;old_locus_tag=LU631_12150 NZ_CP089940.1 Protein Homology CDS 2274914 2275660 . + 0 ID=cds-WP_016192916.1;Parent=gene-LU631_RS12150;Dbxref=Genbank:WP_016192916.1;Name=WP_016192916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800014.1;locus_tag=LU631_RS12150;product=ATP-binding protein;protein_id=WP_016192916.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2275680 2276504 . + . ID=gene-LU631_RS12155;Name=LU631_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12155;old_locus_tag=LU631_12155 NZ_CP089940.1 Protein Homology CDS 2275680 2276504 . + 0 ID=cds-WP_016192915.1;Parent=gene-LU631_RS12155;Dbxref=Genbank:WP_016192915.1;Name=WP_016192915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192915.1;locus_tag=LU631_RS12155;product=hypothetical protein;protein_id=WP_016192915.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2276552 2276794 . + . ID=gene-LU631_RS12160;Name=LU631_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12160;old_locus_tag=LU631_12160 NZ_CP089940.1 Protein Homology CDS 2276552 2276794 . + 0 ID=cds-WP_016192914.1;Parent=gene-LU631_RS12160;Dbxref=Genbank:WP_016192914.1;Name=WP_016192914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544056.1;locus_tag=LU631_RS12160;product=hypothetical protein;protein_id=WP_016192914.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2276784 2277383 . + . ID=gene-LU631_RS12165;Name=LU631_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12165;old_locus_tag=LU631_12165 NZ_CP089940.1 Protein Homology CDS 2276784 2277383 . + 0 ID=cds-WP_016192913.1;Parent=gene-LU631_RS12165;Dbxref=Genbank:WP_016192913.1;Name=WP_016192913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544057.1;locus_tag=LU631_RS12165;product=HNH endonuclease signature motif containing protein;protein_id=WP_016192913.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2277813 2277974 . - . ID=gene-LU631_RS12170;Name=LU631_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12170;old_locus_tag=LU631_12170 NZ_CP089940.1 GeneMarkS-2+ CDS 2277813 2277974 . - 0 ID=cds-WP_157275273.1;Parent=gene-LU631_RS12170;Dbxref=Genbank:WP_157275273.1;Name=WP_157275273.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS12170;product=hypothetical protein;protein_id=WP_157275273.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2278135 2279355 . - . ID=gene-LU631_RS12175;Name=LU631_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12175;old_locus_tag=LU631_12175 NZ_CP089940.1 Protein Homology CDS 2278135 2279355 . - 0 ID=cds-WP_046371806.1-8;Parent=gene-LU631_RS12175;Dbxref=Genbank:WP_046371806.1;Name=WP_046371806.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025244073.1;locus_tag=LU631_RS12175;product=ISL3 family transposase;protein_id=WP_046371806.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2279560 2279757 . + . ID=gene-LU631_RS12180;Name=LU631_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12180;old_locus_tag=LU631_12180 NZ_CP089940.1 Protein Homology CDS 2279560 2279757 . + 0 ID=cds-WP_016192912.1;Parent=gene-LU631_RS12180;Dbxref=Genbank:WP_016192912.1;Name=WP_016192912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668060.1;locus_tag=LU631_RS12180;product=hypothetical protein;protein_id=WP_016192912.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2279815 2280414 . + . ID=gene-LU631_RS12185;Name=LU631_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12185;old_locus_tag=LU631_12185 NZ_CP089940.1 Protein Homology CDS 2279815 2280414 . + 0 ID=cds-WP_016192911.1;Parent=gene-LU631_RS12185;Dbxref=Genbank:WP_016192911.1;Name=WP_016192911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006119778.1;locus_tag=LU631_RS12185;product=DUF1367 family protein;protein_id=WP_016192911.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2280411 2281064 . + . ID=gene-LU631_RS12190;Name=LU631_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12190;old_locus_tag=LU631_12190 NZ_CP089940.1 Protein Homology CDS 2280411 2281064 . + 0 ID=cds-WP_016192910.1;Parent=gene-LU631_RS12190;Dbxref=Genbank:WP_016192910.1;Name=WP_016192910.1;Ontology_term=GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192910.1;locus_tag=LU631_RS12190;product=phage N-6-adenine-methyltransferase;protein_id=WP_016192910.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2281061 2281357 . + . ID=gene-LU631_RS12195;Name=LU631_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12195;old_locus_tag=LU631_12195 NZ_CP089940.1 Protein Homology CDS 2281061 2281357 . + 0 ID=cds-WP_016192909.1;Parent=gene-LU631_RS12195;Dbxref=Genbank:WP_016192909.1;Name=WP_016192909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813283.1;locus_tag=LU631_RS12195;product=DUF1364 domain-containing protein;protein_id=WP_016192909.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2281354 2281737 . + . ID=gene-LU631_RS12200;Name=LU631_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12200;old_locus_tag=LU631_12200 NZ_CP089940.1 Protein Homology CDS 2281354 2281737 . + 0 ID=cds-WP_016192908.1;Parent=gene-LU631_RS12200;Dbxref=Genbank:WP_016192908.1;Name=WP_016192908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820535.1;locus_tag=LU631_RS12200;product=hypothetical protein;protein_id=WP_016192908.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2281734 2282432 . + . ID=gene-LU631_RS12205;Name=LU631_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12205;old_locus_tag=LU631_12205 NZ_CP089940.1 Protein Homology CDS 2281734 2282432 . + 0 ID=cds-WP_016192907.1;Parent=gene-LU631_RS12205;Dbxref=Genbank:WP_016192907.1;Name=WP_016192907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006119775.1;locus_tag=LU631_RS12205;product=bacteriophage antitermination protein Q;protein_id=WP_016192907.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2282566 2282769 . + . ID=gene-LU631_RS12210;Name=LU631_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12210;old_locus_tag=LU631_12210 NZ_CP089940.1 Protein Homology CDS 2282566 2282769 . + 0 ID=cds-WP_016192906.1;Parent=gene-LU631_RS12210;Dbxref=Genbank:WP_016192906.1;Name=WP_016192906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006119774.1;locus_tag=LU631_RS12210;product=DUF2767 family protein;protein_id=WP_016192906.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2282927 2283253 . + . ID=gene-LU631_RS12215;Name=LU631_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12215;old_locus_tag=LU631_12215 NZ_CP089940.1 Protein Homology CDS 2282927 2283253 . + 0 ID=cds-WP_016192905.1;Parent=gene-LU631_RS12215;Dbxref=Genbank:WP_016192905.1;Name=WP_016192905.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906785.1;locus_tag=LU631_RS12215;product=phage holin%2C lambda family;protein_id=WP_016192905.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2283250 2283861 . + . ID=gene-LU631_RS12220;Name=LU631_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12220;old_locus_tag=LU631_12220 NZ_CP089940.1 Protein Homology CDS 2283250 2283861 . + 0 ID=cds-WP_016192904.1;Parent=gene-LU631_RS12220;Dbxref=Genbank:WP_016192904.1;Name=WP_016192904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192890.1;locus_tag=LU631_RS12220;product=glycoside hydrolase family 19 protein;protein_id=WP_016192904.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2283858 2284289 . + . ID=gene-LU631_RS12225;Name=LU631_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12225;old_locus_tag=LU631_12225 NZ_CP089940.1 Protein Homology CDS 2283858 2284289 . + 0 ID=cds-WP_016192903.1;Parent=gene-LU631_RS12225;Dbxref=Genbank:WP_016192903.1;Name=WP_016192903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000244469.1;locus_tag=LU631_RS12225;product=DUF2514 family protein;protein_id=WP_016192903.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2284315 2284683 . + . ID=gene-LU631_RS12230;Name=LU631_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12230;old_locus_tag=LU631_12230 NZ_CP089940.1 GeneMarkS-2+ CDS 2284315 2284683 . + 0 ID=cds-WP_016192902.1;Parent=gene-LU631_RS12230;Dbxref=Genbank:WP_016192902.1;Name=WP_016192902.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS12230;product=hypothetical protein;protein_id=WP_016192902.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2284680 2284967 . - . ID=gene-LU631_RS12235;Name=LU631_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12235;old_locus_tag=LU631_12235 NZ_CP089940.1 Protein Homology CDS 2284680 2284967 . - 0 ID=cds-WP_016192901.1;Parent=gene-LU631_RS12235;Dbxref=Genbank:WP_016192901.1;Name=WP_016192901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000220602.1;locus_tag=LU631_RS12235;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_016192901.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2284974 2285231 . - . ID=gene-LU631_RS12240;Name=LU631_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12240;old_locus_tag=LU631_12240 NZ_CP089940.1 Protein Homology CDS 2284974 2285231 . - 0 ID=cds-WP_016192900.1;Parent=gene-LU631_RS12240;Dbxref=Genbank:WP_016192900.1;Name=WP_016192900.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297790.1;locus_tag=LU631_RS12240;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_016192900.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2285558 2286154 . + . ID=gene-LU631_RS12245;Name=LU631_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12245;old_locus_tag=LU631_12245 NZ_CP089940.1 Protein Homology CDS 2285558 2286154 . + 0 ID=cds-WP_046372277.1;Parent=gene-LU631_RS12245;Dbxref=Genbank:WP_046372277.1;Name=WP_046372277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001421227.1;locus_tag=LU631_RS12245;product=ORF6N domain-containing protein;protein_id=WP_046372277.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2286308 2286457 . + . ID=gene-LU631_RS12250;Name=LU631_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12250;old_locus_tag=LU631_12250 NZ_CP089940.1 GeneMarkS-2+ CDS 2286308 2286457 . + 0 ID=cds-WP_157275272.1;Parent=gene-LU631_RS12250;Dbxref=Genbank:WP_157275272.1;Name=WP_157275272.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS12250;product=hypothetical protein;protein_id=WP_157275272.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2286664 2286816 . + . ID=gene-LU631_RS12255;Name=LU631_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12255;old_locus_tag=LU631_12255 NZ_CP089940.1 Protein Homology CDS 2286664 2286816 . + 0 ID=cds-WP_016192898.1;Parent=gene-LU631_RS12255;Dbxref=Genbank:WP_016192898.1;Name=WP_016192898.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025292.1;locus_tag=LU631_RS12255;product=Hok/Gef family protein;protein_id=WP_016192898.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2286994 2287590 . + . ID=gene-LU631_RS12260;Name=LU631_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12260;old_locus_tag=LU631_12260 NZ_CP089940.1 Protein Homology CDS 2286994 2287590 . + 0 ID=cds-WP_046372003.1;Parent=gene-LU631_RS12260;Dbxref=Genbank:WP_046372003.1;Name=WP_046372003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006119778.1;locus_tag=LU631_RS12260;product=DUF1367 family protein;protein_id=WP_046372003.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2287587 2288240 . + . ID=gene-LU631_RS12265;Name=LU631_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12265;old_locus_tag=LU631_12265 NZ_CP089940.1 Protein Homology CDS 2287587 2288240 . + 0 ID=cds-WP_046372004.1;Parent=gene-LU631_RS12265;Dbxref=Genbank:WP_046372004.1;Name=WP_046372004.1;Ontology_term=GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192910.1;locus_tag=LU631_RS12265;product=phage N-6-adenine-methyltransferase;protein_id=WP_046372004.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2288237 2289703 . + . ID=gene-LU631_RS12270;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=pseudogene;locus_tag=LU631_RS12270;old_locus_tag=LU631_12270;pseudo=true NZ_CP089940.1 Protein Homology CDS 2288237 2289703 . + 0 ID=cds-LU631_RS12270;Parent=gene-LU631_RS12270;Note=internal stop;Ontology_term=GO:0006304,GO:0003886;gbkey=CDS;gene=dcm;go_function=DNA (cytosine-5-)-methyltransferase activity|0003886||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009459716.1;locus_tag=LU631_RS12270;product=DNA (cytosine-5-)-methyltransferase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2289700 2289993 . + . ID=gene-LU631_RS12275;Name=LU631_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12275;old_locus_tag=LU631_12275 NZ_CP089940.1 Protein Homology CDS 2289700 2289993 . + 0 ID=cds-WP_016192894.1;Parent=gene-LU631_RS12275;Dbxref=Genbank:WP_016192894.1;Name=WP_016192894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813283.1;locus_tag=LU631_RS12275;product=DUF1364 domain-containing protein;protein_id=WP_016192894.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2289990 2290367 . + . ID=gene-LU631_RS12280;Name=LU631_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12280;old_locus_tag=LU631_12280 NZ_CP089940.1 Protein Homology CDS 2289990 2290367 . + 0 ID=cds-WP_016192893.1;Parent=gene-LU631_RS12280;Dbxref=Genbank:WP_016192893.1;Name=WP_016192893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519816.1;locus_tag=LU631_RS12280;product=hypothetical protein;protein_id=WP_016192893.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2290375 2291061 . + . ID=gene-LU631_RS12285;Name=LU631_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12285;old_locus_tag=LU631_12285 NZ_CP089940.1 Protein Homology CDS 2290375 2291061 . + 0 ID=cds-WP_016192892.1;Parent=gene-LU631_RS12285;Dbxref=Genbank:WP_016192892.1;Name=WP_016192892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192907.1;locus_tag=LU631_RS12285;product=bacteriophage antitermination protein Q;protein_id=WP_016192892.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2291225 2291329 . + . ID=gene-LU631_RS12290;Name=LU631_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12290;old_locus_tag=LU631_12290 NZ_CP089940.1 Protein Homology CDS 2291225 2291329 . + 0 ID=cds-WP_233482029.1;Parent=gene-LU631_RS12290;Dbxref=Genbank:WP_233482029.1;Name=WP_233482029.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022418.2;locus_tag=LU631_RS12290;product=hypothetical protein;protein_id=WP_233482029.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2291551 2291871 . + . ID=gene-LU631_RS12295;Name=LU631_RS12295;end_range=2291871,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12295;old_locus_tag=LU631_12295;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2291551 2291871 . + 0 ID=cds-LU631_RS12295;Parent=gene-LU631_RS12295;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2291871,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192905.1;locus_tag=LU631_RS12295;partial=true;product=phage holin family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2291943 2292554 . + . ID=gene-LU631_RS12300;Name=LU631_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12300;old_locus_tag=LU631_12300 NZ_CP089940.1 Protein Homology CDS 2291943 2292554 . + 0 ID=cds-WP_016192890.1;Parent=gene-LU631_RS12300;Dbxref=Genbank:WP_016192890.1;Name=WP_016192890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192890.1;locus_tag=LU631_RS12300;product=glycoside hydrolase family 19 protein;protein_id=WP_016192890.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2292996 2294210 . - . ID=gene-LU631_RS12305;Name=LU631_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12305;old_locus_tag=LU631_12305 NZ_CP089940.1 Protein Homology CDS 2292996 2294210 . - 0 ID=cds-WP_046372006.1;Parent=gene-LU631_RS12305;Dbxref=Genbank:WP_046372006.1;Name=WP_046372006.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS12305;product=IS91 family transposase;protein_id=WP_046372006.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2294219 2294359 . - . ID=gene-LU631_RS12310;Name=LU631_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12310;old_locus_tag=LU631_12310 NZ_CP089940.1 GeneMarkS-2+ CDS 2294219 2294359 . - 0 ID=cds-WP_161796965.1-10;Parent=gene-LU631_RS12310;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS12310;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2294721 2295761 . - . ID=gene-LU631_RS12315;Name=LU631_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12315;old_locus_tag=LU631_12315 NZ_CP089940.1 Protein Homology CDS 2294721 2295761 . - 0 ID=cds-WP_046372007.1;Parent=gene-LU631_RS12315;Dbxref=Genbank:WP_046372007.1;Name=WP_046372007.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS12315;product=IS481 family transposase;protein_id=WP_046372007.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2295955 2296987 . - . ID=gene-LU631_RS12320;Name=LU631_RS12320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12320;old_locus_tag=LU631_12320;partial=true;pseudo=true;start_range=.,2295955 NZ_CP089940.1 Protein Homology CDS 2295955 2296987 . - 0 ID=cds-LU631_RS12320;Parent=gene-LU631_RS12320;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS12320;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,2295955;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2297158 2300115 . - . ID=gene-LU631_RS12325;Name=LU631_RS12325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12325;old_locus_tag=LU631_12325;pseudo=true NZ_CP089940.1 Protein Homology CDS 2297158 2300115 . - 0 ID=cds-LU631_RS12325;Parent=gene-LU631_RS12325;Note=internal stop;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751376.1;locus_tag=LU631_RS12325;product=DEAD/DEAH box helicase family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2300125 2300577 . - . ID=gene-LU631_RS12330;Name=LU631_RS12330;end_range=2300577,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12330;old_locus_tag=LU631_12330;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2300125 2300577 . - 0 ID=cds-LU631_RS12330;Parent=gene-LU631_RS12330;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2300577,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151472.1;locus_tag=LU631_RS12330;partial=true;product=site-specific DNA-methyltransferase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2300615 2301825 . - . ID=gene-LU631_RS12335;Name=LU631_RS12335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12335;old_locus_tag=LU631_12335;pseudo=true NZ_CP089940.1 Protein Homology CDS 2300615 2301825 . - 0 ID=cds-LU631_RS12335;Parent=gene-LU631_RS12335;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS12335;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2301881 2303506 . - . ID=gene-LU631_RS12340;Name=LU631_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12340;old_locus_tag=LU631_12340 NZ_CP089940.1 Protein Homology CDS 2301881 2303506 . - 0 ID=cds-WP_046372279.1;Parent=gene-LU631_RS12340;Dbxref=Genbank:WP_046372279.1;Name=WP_046372279.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013704.2;locus_tag=LU631_RS12340;product=site-specific DNA-methyltransferase;protein_id=WP_046372279.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2303686 2304957 . - . ID=gene-LU631_RS12345;Name=LU631_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12345;old_locus_tag=LU631_12345 NZ_CP089940.1 Protein Homology CDS 2303686 2304957 . - 0 ID=cds-WP_016192886.1;Parent=gene-LU631_RS12345;Dbxref=Genbank:WP_016192886.1;Name=WP_016192886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736342.1;locus_tag=LU631_RS12345;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_016192886.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2305127 2305202 . - . ID=gene-LU631_RS12350;Name=LU631_RS12350;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS12350;old_locus_tag=LU631_12350 NZ_CP089940.1 tRNAscan-SE tRNA 2305127 2305202 . - . ID=rna-LU631_RS12350;Parent=gene-LU631_RS12350;anticodon=(pos:complement(2305167..2305169));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS12350;product=tRNA-Asn NZ_CP089940.1 tRNAscan-SE exon 2305127 2305202 . - . ID=exon-LU631_RS12350-1;Parent=rna-LU631_RS12350;anticodon=(pos:complement(2305167..2305169));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS12350;product=tRNA-Asn NZ_CP089940.1 RefSeq pseudogene 2305543 2306135 . - . ID=gene-LU631_RS12355;Name=LU631_RS12355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12355;old_locus_tag=LU631_12355;pseudo=true NZ_CP089940.1 Protein Homology CDS 2305543 2306135 . - 0 ID=cds-LU631_RS12355;Parent=gene-LU631_RS12355;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010247721.1;locus_tag=LU631_RS12355;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2306572 2306760 . - . ID=gene-LU631_RS12360;Name=LU631_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12360;old_locus_tag=LU631_12360 NZ_CP089940.1 Protein Homology CDS 2306572 2306760 . - 0 ID=cds-WP_016192885.1;Parent=gene-LU631_RS12360;Dbxref=Genbank:WP_016192885.1;Name=WP_016192885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322936.1;locus_tag=LU631_RS12360;product=hypothetical protein;protein_id=WP_016192885.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2306887 2307195 . + . ID=gene-LU631_RS12365;Name=LU631_RS12365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12365;old_locus_tag=LU631_12365;partial=true;pseudo=true;start_range=.,2306887 NZ_CP089940.1 Protein Homology CDS 2306887 2307195 . + 0 ID=cds-LU631_RS12365;Parent=gene-LU631_RS12365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS12365;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,2306887;transl_table=11 NZ_CP089940.1 RefSeq gene 2307339 2307995 . - . ID=gene-LU631_RS12370;Name=LU631_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12370;old_locus_tag=LU631_12370 NZ_CP089940.1 Protein Homology CDS 2307339 2307995 . - 0 ID=cds-WP_016192883.1;Parent=gene-LU631_RS12370;Dbxref=Genbank:WP_016192883.1;Name=WP_016192883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078001.1;locus_tag=LU631_RS12370;product=epoxyqueuosine reductase QueH;protein_id=WP_016192883.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2308203 2309573 . + . ID=gene-LU631_RS12375;Name=LU631_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12375;old_locus_tag=LU631_12375 NZ_CP089940.1 Protein Homology CDS 2308203 2309573 . + 0 ID=cds-WP_232426932.1;Parent=gene-LU631_RS12375;Dbxref=Genbank:WP_232426932.1;Name=WP_232426932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202699.1;locus_tag=LU631_RS12375;product=DNA cytosine methyltransferase;protein_id=WP_232426932.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2309695 2310165 . + . ID=gene-LU631_RS12380;Name=vsr;gbkey=Gene;gene=vsr;gene_biotype=protein_coding;locus_tag=LU631_RS12380;old_locus_tag=LU631_12380 NZ_CP089940.1 Protein Homology CDS 2309695 2310165 . + 0 ID=cds-WP_016192881.1;Parent=gene-LU631_RS12380;Dbxref=Genbank:WP_016192881.1;Name=WP_016192881.1;Ontology_term=GO:0006298,GO:0004520;gbkey=CDS;gene=vsr;go_function=endodeoxyribonuclease activity|0004520||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158131.1;locus_tag=LU631_RS12380;product=DNA mismatch endonuclease Vsr;protein_id=WP_016192881.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2310280 2310546 . + . ID=gene-LU631_RS12385;Name=LU631_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12385;old_locus_tag=LU631_12385 NZ_CP089940.1 Protein Homology CDS 2310280 2310546 . + 0 ID=cds-WP_016192880.1;Parent=gene-LU631_RS12385;Dbxref=Genbank:WP_016192880.1;Name=WP_016192880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667804.1;locus_tag=LU631_RS12385;product=hypothetical protein;protein_id=WP_016192880.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2310564 2311012 . + . ID=gene-LU631_RS12390;Name=LU631_RS12390;end_range=2311012,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12390;old_locus_tag=LU631_12390;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2310564 2311012 . + 0 ID=cds-LU631_RS12390;Parent=gene-LU631_RS12390;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2311012,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009089528.1;locus_tag=LU631_RS12390;partial=true;product=DUF808 family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2311047 2312255 . - . ID=gene-LU631_RS12395;Name=LU631_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12395;old_locus_tag=LU631_12395 NZ_CP089940.1 Protein Homology CDS 2311047 2312255 . - 0 ID=cds-WP_016192878.1;Parent=gene-LU631_RS12395;Dbxref=Genbank:WP_016192878.1;Name=WP_016192878.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU631_RS12395;product=IS256 family transposase;protein_id=WP_016192878.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2312330 2312794 . + . ID=gene-LU631_RS12400;Name=LU631_RS12400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12400;old_locus_tag=LU631_12400;partial=true;pseudo=true;start_range=.,2312330 NZ_CP089940.1 Protein Homology CDS 2312330 2312794 . + 0 ID=cds-LU631_RS12400;Parent=gene-LU631_RS12400;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170106.1;locus_tag=LU631_RS12400;partial=true;product=DUF808 family protein;pseudo=true;start_range=.,2312330;transl_table=11 NZ_CP089940.1 RefSeq gene 2312929 2313060 . + . ID=gene-LU631_RS26070;Name=LU631_RS26070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26070 NZ_CP089940.1 Protein Homology CDS 2312929 2313060 . + 0 ID=cds-WP_016192876.1;Parent=gene-LU631_RS26070;Dbxref=Genbank:WP_016192876.1;Name=WP_016192876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800086.1;locus_tag=LU631_RS26070;product=hypothetical protein;protein_id=WP_016192876.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2313804 2313905 . + . ID=gene-LU631_RS12405;Name=LU631_RS12405;end_range=2313905,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12405;old_locus_tag=LU631_12405;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2313804 2313905 . + 0 ID=cds-LU631_RS12405;Parent=gene-LU631_RS12405;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2313905,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202693.1;locus_tag=LU631_RS12405;partial=true;product=DUF2158 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2313991 2314134 . + . ID=gene-LU631_RS12410;Name=LU631_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12410;old_locus_tag=LU631_12410 NZ_CP089940.1 GeneMarkS-2+ CDS 2313991 2314134 . + 0 ID=cds-WP_232426930.1;Parent=gene-LU631_RS12410;Dbxref=Genbank:WP_232426930.1;Name=WP_232426930.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS12410;product=hypothetical protein;protein_id=WP_232426930.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2315248 2315734 . + . ID=gene-LU631_RS12415;Name=LU631_RS12415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12415;old_locus_tag=LU631_12415;pseudo=true NZ_CP089940.1 Protein Homology CDS 2315248 2315734 . + 0 ID=cds-LU631_RS12415;Parent=gene-LU631_RS12415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356911.1;locus_tag=LU631_RS12415;product=lysozyme;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2315710 2316014 . + . ID=gene-LU631_RS12420;Name=LU631_RS12420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12420;old_locus_tag=LU631_12420;pseudo=true NZ_CP089940.1 Protein Homology CDS 2315710 2316014 . + 0 ID=cds-LU631_RS12420;Parent=gene-LU631_RS12420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008108960.1;locus_tag=LU631_RS12420;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2316151 2317915 . + . ID=gene-LU631_RS12425;Name=LU631_RS12425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12425;old_locus_tag=LU631_12425;pseudo=true NZ_CP089940.1 Protein Homology CDS 2316151 2317915 . + 0 ID=cds-LU631_RS12425;Parent=gene-LU631_RS12425;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544028.1;locus_tag=LU631_RS12425;product=glycosyl hydrolase family 28-related protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2318275 2318478 . + . ID=gene-LU631_RS12430;Name=LU631_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12430;old_locus_tag=LU631_12430 NZ_CP089940.1 Protein Homology CDS 2318275 2318478 . + 0 ID=cds-WP_016192871.1;Parent=gene-LU631_RS12430;Dbxref=Genbank:WP_016192871.1;Name=WP_016192871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201729.1;locus_tag=LU631_RS12430;product=hypothetical protein;protein_id=WP_016192871.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2318726 2319926 . + . ID=gene-LU631_RS12435;Name=LU631_RS12435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12435;old_locus_tag=LU631_12435;pseudo=true NZ_CP089940.1 Protein Homology CDS 2318726 2319926 . + 0 ID=cds-LU631_RS12435;Parent=gene-LU631_RS12435;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS12435;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2320072 2321110 . - . ID=gene-LU631_RS12440;Name=LU631_RS12440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12440;old_locus_tag=LU631_12440;pseudo=true NZ_CP089940.1 Protein Homology CDS 2320072 2321110 . - 0 ID=cds-LU631_RS12440;Parent=gene-LU631_RS12440;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS12440;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2321211 2321504 . + . ID=gene-LU631_RS12445;Name=LU631_RS12445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12445;old_locus_tag=LU631_12445;partial=true;pseudo=true;start_range=.,2321211 NZ_CP089940.1 Protein Homology CDS 2321211 2321504 . + 0 ID=cds-LU631_RS12445;Parent=gene-LU631_RS12445;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS12445;partial=true;product=transposase;pseudo=true;start_range=.,2321211;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2321541 2321606 . - . ID=gene-LU631_RS12450;Name=LU631_RS12450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12450;old_locus_tag=LU631_12450;partial=true;pseudo=true;start_range=.,2321541 NZ_CP089940.1 Protein Homology CDS 2321541 2321606 . - 0 ID=cds-LU631_RS12450;Parent=gene-LU631_RS12450;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228467.1;locus_tag=LU631_RS12450;partial=true;product=type VI secretion system tube protein Hcp;pseudo=true;start_range=.,2321541;transl_table=11 NZ_CP089940.1 RefSeq gene 2321924 2322847 . - . ID=gene-LU631_RS12455;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=LU631_RS12455;old_locus_tag=LU631_12455 NZ_CP089940.1 Protein Homology CDS 2321924 2322847 . - 0 ID=cds-WP_016192868.1;Parent=gene-LU631_RS12455;Dbxref=Genbank:WP_016192868.1;Name=WP_016192868.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441665.1;locus_tag=LU631_RS12455;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_016192868.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2323114 2323746 . + . ID=gene-LU631_RS12460;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=LU631_RS12460;old_locus_tag=LU631_12460 NZ_CP089940.1 Protein Homology CDS 2323114 2323746 . + 0 ID=cds-WP_040465879.1;Parent=gene-LU631_RS12460;Dbxref=Genbank:WP_040465879.1;Name=WP_040465879.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157223.1;locus_tag=LU631_RS12460;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_040465879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2323871 2324602 . - . ID=gene-LU631_RS12465;Name=LU631_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12465;old_locus_tag=LU631_12465 NZ_CP089940.1 Protein Homology CDS 2323871 2324602 . - 0 ID=cds-WP_016192865.1;Parent=gene-LU631_RS12465;Dbxref=Genbank:WP_016192865.1;Name=WP_016192865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015700524.1;locus_tag=LU631_RS12465;product=flagellar brake protein;protein_id=WP_016192865.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2324777 2325025 . + . ID=gene-LU631_RS12470;Name=LU631_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12470;old_locus_tag=LU631_12470 NZ_CP089940.1 Protein Homology CDS 2324777 2325025 . + 0 ID=cds-WP_016192864.1;Parent=gene-LU631_RS12470;Dbxref=Genbank:WP_016192864.1;Name=WP_016192864.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=LU631_RS12470;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_016192864.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2325415 2326088 . + . ID=gene-LU631_RS12475;Name=LU631_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12475;old_locus_tag=LU631_12475 NZ_CP089940.1 Protein Homology CDS 2325415 2325673 . + 0 ID=cds-WP_152664194.1;Parent=gene-LU631_RS12475;Dbxref=Genbank:WP_152664194.1;Name=WP_152664194.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU631_RS12475;product=IS1 family transposase;protein_id=WP_152664194.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 2325673 2326088 . + 2 ID=cds-WP_152664194.1;Parent=gene-LU631_RS12475;Dbxref=Genbank:WP_152664194.1;Name=WP_152664194.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU631_RS12475;product=IS1 family transposase;protein_id=WP_152664194.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2326213 2328359 . - . ID=gene-LU631_RS12480;Name=LU631_RS12480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12480;old_locus_tag=LU631_12480;pseudo=true NZ_CP089940.1 Protein Homology CDS 2326213 2328359 . - 0 ID=cds-LU631_RS12480;Parent=gene-LU631_RS12480;Note=frameshifted;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171024.1;locus_tag=LU631_RS12480;product=TonB-dependent siderophore receptor;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2328569 2330242 . - . ID=gene-LU631_RS12485;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=LU631_RS12485;old_locus_tag=LU631_12485 NZ_CP089940.1 Protein Homology CDS 2328569 2330242 . - 0 ID=cds-WP_040465878.1;Parent=gene-LU631_RS12485;Dbxref=Genbank:WP_040465878.1;Name=WP_040465878.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;gene=treA;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201743.1;locus_tag=LU631_RS12485;product=alpha%2Calpha-trehalase TreA;protein_id=WP_040465878.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2330725 2331900 . + . ID=gene-LU631_RS12490;Name=LU631_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12490;old_locus_tag=LU631_12490 NZ_CP089940.1 Protein Homology CDS 2330725 2331900 . + 0 ID=cds-WP_016192861.1;Parent=gene-LU631_RS12490;Dbxref=Genbank:WP_016192861.1;Name=WP_016192861.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023902.2;locus_tag=LU631_RS12490;product=type VI secretion system ImpA family N-terminal domain-containing protein;protein_id=WP_016192861.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2331940 2333379 . - . ID=gene-LU631_RS12495;Name=LU631_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12495;old_locus_tag=LU631_12495 NZ_CP089940.1 Protein Homology CDS 2331940 2333379 . - 0 ID=cds-WP_198292556.1;Parent=gene-LU631_RS12495;Dbxref=Genbank:WP_198292556.1;Name=WP_198292556.1;Ontology_term=GO:0006820,GO:0008509,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=anion transmembrane transporter activity|0008509||IEA;go_process=anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851475.1;locus_tag=LU631_RS12495;product=DASS family sodium-coupled anion symporter;protein_id=WP_198292556.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2334135 2336912 . + . ID=gene-LU631_RS12500;Name=LU631_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12500;old_locus_tag=LU631_12500 NZ_CP089940.1 Protein Homology CDS 2334135 2336912 . + 0 ID=cds-WP_016192859.1;Parent=gene-LU631_RS12500;Dbxref=Genbank:WP_016192859.1;Name=WP_016192859.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013196203.1;locus_tag=LU631_RS12500;product=flavocytochrome c;protein_id=WP_016192859.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2337266 2337770 . + . ID=gene-LU631_RS12505;Name=LU631_RS12505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12505;old_locus_tag=LU631_12505;pseudo=true NZ_CP089940.1 Protein Homology CDS 2337266 2337770 . + 0 ID=cds-LU631_RS12505;Parent=gene-LU631_RS12505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803207.1;locus_tag=LU631_RS12505;product=peroxiredoxin;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2337804 2337941 . - . ID=gene-LU631_RS12510;Name=LU631_RS12510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12510;old_locus_tag=LU631_12510;partial=true;pseudo=true;start_range=.,2337804 NZ_CP089940.1 Protein Homology CDS 2337804 2337941 . - 0 ID=cds-LU631_RS12510;Parent=gene-LU631_RS12510;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001357423.1;locus_tag=LU631_RS12510;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,2337804;transl_table=11 NZ_CP089940.1 RefSeq gene 2338114 2339205 . - . ID=gene-LU631_RS12515;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=LU631_RS12515;old_locus_tag=LU631_12515 NZ_CP089940.1 Protein Homology CDS 2338114 2339205 . - 0 ID=cds-WP_016192857.1;Parent=gene-LU631_RS12515;Dbxref=Genbank:WP_016192857.1;Name=WP_016192857.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=LU631_RS12515;product=redox-regulated ATPase YchF;protein_id=WP_016192857.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2339398 2340362 . + . ID=gene-LU631_RS12520;Name=LU631_RS12520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12520;old_locus_tag=LU631_12520;partial=true;pseudo=true;start_range=.,2339398 NZ_CP089940.1 Protein Homology CDS 2339398 2340362 . + 0 ID=cds-LU631_RS12520;Parent=gene-LU631_RS12520;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008272,GO:0015116,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006316743.1;locus_tag=LU631_RS12520;partial=true;product=SulP family inorganic anion transporter;pseudo=true;start_range=.,2339398;transl_table=11 NZ_CP089940.1 RefSeq gene 2340443 2340946 . - . ID=gene-LU631_RS12525;Name=LU631_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12525;old_locus_tag=LU631_12525 NZ_CP089940.1 Protein Homology CDS 2340443 2340946 . - 0 ID=cds-WP_046372010.1;Parent=gene-LU631_RS12525;Dbxref=Genbank:WP_046372010.1;Name=WP_046372010.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU631_RS12525;product=IS1 family transposase;protein_id=WP_046372010.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2340865 2341140 . - . ID=gene-LU631_RS12530;Name=LU631_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12530;old_locus_tag=LU631_12530 NZ_CP089940.1 Protein Homology CDS 2340865 2341140 . - 0 ID=cds-WP_072052821.1;Parent=gene-LU631_RS12530;Dbxref=Genbank:WP_072052821.1;Name=WP_072052821.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU631_RS12530;product=IS1-like element transposase;protein_id=WP_072052821.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2341365 2341922 . + . ID=gene-LU631_RS12535;Name=LU631_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12535;old_locus_tag=LU631_12535 NZ_CP089940.1 Protein Homology CDS 2341365 2341922 . + 0 ID=cds-WP_232426929.1;Parent=gene-LU631_RS12535;Dbxref=Genbank:WP_232426929.1;Name=WP_232426929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169626.1;locus_tag=LU631_RS12535;product=EAL domain-containing protein;protein_id=WP_232426929.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2341999 2342163 . - . ID=gene-LU631_RS12540;Name=LU631_RS12540;end_range=2342163,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12540;old_locus_tag=LU631_12540;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2341999 2342163 . - 0 ID=cds-LU631_RS12540;Parent=gene-LU631_RS12540;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2342163,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU631_RS12540;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2342313 2342744 . - . ID=gene-LU631_RS12545;Name=LU631_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12545;old_locus_tag=LU631_12545 NZ_CP089940.1 Protein Homology CDS 2342313 2342744 . - 0 ID=cds-WP_046372013.1-5;Parent=gene-LU631_RS12545;Dbxref=Genbank:WP_046372013.1;Name=WP_046372013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS12545;product=IS91 family transposase;protein_id=WP_046372013.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2342726 2343526 . - . ID=gene-LU631_RS12550;Name=LU631_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12550;old_locus_tag=LU631_12550 NZ_CP089940.1 Protein Homology CDS 2342726 2343526 . - 0 ID=cds-WP_046372014.1;Parent=gene-LU631_RS12550;Dbxref=Genbank:WP_046372014.1;Name=WP_046372014.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS12550;product=IS91 family transposase;protein_id=WP_046372014.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2343535 2343675 . - . ID=gene-LU631_RS12555;Name=LU631_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12555;old_locus_tag=LU631_12555 NZ_CP089940.1 GeneMarkS-2+ CDS 2343535 2343675 . - 0 ID=cds-WP_161796965.1-11;Parent=gene-LU631_RS12555;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS12555;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2344520 2344702 . - . ID=gene-LU631_RS12560;Name=LU631_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12560;old_locus_tag=LU631_12560 NZ_CP089940.1 GeneMarkS-2+ CDS 2344520 2344702 . - 0 ID=cds-WP_016192853.1;Parent=gene-LU631_RS12560;Dbxref=Genbank:WP_016192853.1;Name=WP_016192853.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS12560;product=hypothetical protein;protein_id=WP_016192853.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2344890 2346170 . - . ID=gene-LU631_RS12565;Name=LU631_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12565;old_locus_tag=LU631_12565 NZ_CP089940.1 Protein Homology CDS 2344890 2346170 . - 0 ID=cds-WP_046372015.1;Parent=gene-LU631_RS12565;Dbxref=Genbank:WP_046372015.1;Name=WP_046372015.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016903.2;locus_tag=LU631_RS12565;product=hypothetical protein;protein_id=WP_046372015.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2346445 2346948 . - . ID=gene-LU631_RS12570;Name=LU631_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12570;old_locus_tag=LU631_12570 NZ_CP089940.1 Protein Homology CDS 2346445 2346948 . - 0 ID=cds-WP_046371870.1;Parent=gene-LU631_RS12570;Dbxref=Genbank:WP_046371870.1;Name=WP_046371870.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU631_RS12570;product=IS1 family transposase;protein_id=WP_046371870.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2346867 2347142 . - . ID=gene-LU631_RS12575;Name=LU631_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12575;old_locus_tag=LU631_12575 NZ_CP089940.1 Protein Homology CDS 2346867 2347142 . - 0 ID=cds-WP_016192850.1;Parent=gene-LU631_RS12575;Dbxref=Genbank:WP_016192850.1;Name=WP_016192850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU631_RS12575;product=transposase;protein_id=WP_016192850.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2348683 2349006 . - . ID=gene-LU631_RS12580;Name=LU631_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12580;old_locus_tag=LU631_12580 NZ_CP089940.1 Protein Homology CDS 2348683 2349006 . - 0 ID=cds-WP_016192849.1;Parent=gene-LU631_RS12580;Dbxref=Genbank:WP_016192849.1;Name=WP_016192849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010618625.1;locus_tag=LU631_RS12580;product=DUF6388 family protein;protein_id=WP_016192849.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2349147 2349629 . + . ID=gene-LU631_RS12585;Name=LU631_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12585;old_locus_tag=LU631_12585 NZ_CP089940.1 Protein Homology CDS 2349147 2349629 . + 0 ID=cds-WP_016192848.1;Parent=gene-LU631_RS12585;Dbxref=Genbank:WP_016192848.1;Name=WP_016192848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202660.1;locus_tag=LU631_RS12585;product=lipoprotein;protein_id=WP_016192848.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2349676 2350803 . - . ID=gene-LU631_RS12590;Name=amyA;end_range=2350803,.;gbkey=Gene;gene=amyA;gene_biotype=pseudogene;locus_tag=LU631_RS12590;old_locus_tag=LU631_12590;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2349676 2350803 . - 0 ID=cds-LU631_RS12590;Parent=gene-LU631_RS12590;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005975,GO:0004553,GO:0005509;end_range=2350803,.;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693217.1;locus_tag=LU631_RS12590;partial=true;product=alpha-amylase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2351043 2352572 . + . ID=gene-LU631_RS12595;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=LU631_RS12595;old_locus_tag=LU631_12595 NZ_CP089940.1 Protein Homology CDS 2351043 2352572 . + 0 ID=cds-WP_046372016.1-2;Parent=gene-LU631_RS12595;Dbxref=Genbank:WP_046372016.1;Name=WP_046372016.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001907982.1;locus_tag=LU631_RS12595;product=IS21 family transposase;protein_id=WP_046372016.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2352583 2353326 . + . ID=gene-LU631_RS12600;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=LU631_RS12600;old_locus_tag=LU631_12600 NZ_CP089940.1 Protein Homology CDS 2352583 2353326 . + 0 ID=cds-WP_046372017.1;Parent=gene-LU631_RS12600;Dbxref=Genbank:WP_046372017.1;Name=WP_046372017.1;Ontology_term=GO:0005524;gbkey=CDS;gene=istB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802959.1;locus_tag=LU631_RS12600;product=IS21-like element helper ATPase IstB;protein_id=WP_046372017.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2353406 2353745 . - . ID=gene-LU631_RS12605;Name=LU631_RS12605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12605;old_locus_tag=LU631_12605;partial=true;pseudo=true;start_range=.,2353406 NZ_CP089940.1 Protein Homology CDS 2353406 2353745 . - 0 ID=cds-LU631_RS12605;Parent=gene-LU631_RS12605;Note=converts 1%2C4-alpha-D-glucans to maltodextrin%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010670835.1;locus_tag=LU631_RS12605;partial=true;product=alpha-amylase;pseudo=true;start_range=.,2353406;transl_table=11 NZ_CP089940.1 RefSeq gene 2353879 2354247 . - . ID=gene-LU631_RS12610;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=LU631_RS12610;old_locus_tag=LU631_12610 NZ_CP089940.1 Protein Homology CDS 2353879 2354247 . - 0 ID=cds-WP_016192845.1;Parent=gene-LU631_RS12610;Dbxref=Genbank:WP_016192845.1;Name=WP_016192845.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544518.1;locus_tag=LU631_RS12610;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_016192845.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2354248 2354655 . - . ID=gene-LU631_RS12615;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=LU631_RS12615;old_locus_tag=LU631_12615 NZ_CP089940.1 Protein Homology CDS 2354248 2354655 . - 0 ID=cds-WP_016192844.1;Parent=gene-LU631_RS12615;Dbxref=Genbank:WP_016192844.1;Name=WP_016192844.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliS;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811147.1;locus_tag=LU631_RS12615;product=flagellar export chaperone FliS;protein_id=WP_016192844.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2354669 2356081 . - . ID=gene-LU631_RS12620;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=LU631_RS12620;old_locus_tag=LU631_12620 NZ_CP089940.1 Protein Homology CDS 2354669 2356081 . - 0 ID=cds-WP_016192843.1;Parent=gene-LU631_RS12620;Dbxref=Genbank:WP_016192843.1;Name=WP_016192843.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202656.1;locus_tag=LU631_RS12620;product=flagellar filament capping protein FliD;protein_id=WP_016192843.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2356362 2357645 . + . ID=gene-LU631_RS12625;Name=LU631_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12625;old_locus_tag=LU631_12625 NZ_CP089940.1 Protein Homology CDS 2356362 2357645 . + 0 ID=cds-WP_016192842.1;Parent=gene-LU631_RS12625;Dbxref=Genbank:WP_016192842.1;Name=WP_016192842.1;Ontology_term=GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079690.1;locus_tag=LU631_RS12625;product=FliC/FljB family flagellin;protein_id=WP_016192842.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2358009 2358605 . - . ID=gene-LU631_RS12630;Name=LU631_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12630;old_locus_tag=LU631_12630 NZ_CP089940.1 Protein Homology CDS 2358009 2358605 . - 0 ID=cds-WP_016191786.1-3;Parent=gene-LU631_RS12630;Dbxref=Genbank:WP_016191786.1;Name=WP_016191786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243405.1;locus_tag=LU631_RS12630;product=tail fiber assembly protein;protein_id=WP_016191786.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2358605 2359297 . - . ID=gene-LU631_RS12635;Name=LU631_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12635;old_locus_tag=LU631_12635 NZ_CP089940.1 Protein Homology CDS 2358605 2359297 . - 0 ID=cds-WP_016191785.1-3;Parent=gene-LU631_RS12635;Dbxref=Genbank:WP_016191785.1;Name=WP_016191785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246703.1;locus_tag=LU631_RS12635;product=phage tail protein;protein_id=WP_016191785.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2359300 2359884 . - . ID=gene-LU631_RS12640;Name=LU631_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12640;old_locus_tag=LU631_12640 NZ_CP089940.1 Protein Homology CDS 2359300 2359884 . - 0 ID=cds-WP_016191784.1-3;Parent=gene-LU631_RS12640;Dbxref=Genbank:WP_016191784.1;Name=WP_016191784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012989058.1;locus_tag=LU631_RS12640;product=DUF2313 domain-containing protein;protein_id=WP_016191784.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2359875 2360954 . - . ID=gene-LU631_RS12645;Name=LU631_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12645;old_locus_tag=LU631_12645 NZ_CP089940.1 Protein Homology CDS 2359875 2360954 . - 0 ID=cds-WP_016191783.1-3;Parent=gene-LU631_RS12645;Dbxref=Genbank:WP_016191783.1;Name=WP_016191783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012989059.1;locus_tag=LU631_RS12645;product=baseplate J/gp47 family protein;protein_id=WP_016191783.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2360955 2361395 . - . ID=gene-LU631_RS12650;Name=LU631_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12650;old_locus_tag=LU631_12650 NZ_CP089940.1 Protein Homology CDS 2360955 2361395 . - 0 ID=cds-WP_016191782.1-3;Parent=gene-LU631_RS12650;Dbxref=Genbank:WP_016191782.1;Name=WP_016191782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185022.1;locus_tag=LU631_RS12650;product=phage GP46 family protein;protein_id=WP_016191782.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2361392 2361940 . - . ID=gene-LU631_RS12655;Name=LU631_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12655;old_locus_tag=LU631_12655 NZ_CP089940.1 Protein Homology CDS 2361392 2361940 . - 0 ID=cds-WP_016191781.1-3;Parent=gene-LU631_RS12655;Dbxref=Genbank:WP_016191781.1;Name=WP_016191781.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185021.1;locus_tag=LU631_RS12655;product=phage baseplate assembly protein V;protein_id=WP_016191781.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2361937 2363034 . - . ID=gene-LU631_RS12660;Name=LU631_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12660;old_locus_tag=LU631_12660 NZ_CP089940.1 Protein Homology CDS 2361937 2363034 . - 0 ID=cds-WP_016191780.1-3;Parent=gene-LU631_RS12660;Dbxref=Genbank:WP_016191780.1;Name=WP_016191780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012989062.1;locus_tag=LU631_RS12660;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_016191780.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2363018 2364334 . - . ID=gene-LU631_RS12665;Name=LU631_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12665;old_locus_tag=LU631_12665 NZ_CP089940.1 Protein Homology CDS 2363018 2364334 . - 0 ID=cds-WP_016191779.1-3;Parent=gene-LU631_RS12665;Dbxref=Genbank:WP_016191779.1;Name=WP_016191779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847257.1;locus_tag=LU631_RS12665;product=DNA circularization N-terminal domain-containing protein;protein_id=WP_016191779.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2364334 2366142 . - . ID=gene-LU631_RS12670;Name=LU631_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12670;old_locus_tag=LU631_12670 NZ_CP089940.1 GeneMarkS-2+ CDS 2364334 2366142 . - 0 ID=cds-WP_016191778.1-3;Parent=gene-LU631_RS12670;Dbxref=Genbank:WP_016191778.1;Name=WP_016191778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS12670;product=hypothetical protein;protein_id=WP_016191778.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2366143 2366274 . - . ID=gene-LU631_RS26075;Name=LU631_RS26075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26075 NZ_CP089940.1 GeneMarkS-2+ CDS 2366143 2366274 . - 0 ID=cds-WP_016191777.1-3;Parent=gene-LU631_RS26075;Dbxref=Genbank:WP_016191777.1;Name=WP_016191777.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS26075;product=hypothetical protein;protein_id=WP_016191777.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2366276 2366629 . - . ID=gene-LU631_RS12675;Name=LU631_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12675;old_locus_tag=LU631_12675 NZ_CP089940.1 Protein Homology CDS 2366276 2366629 . - 0 ID=cds-WP_016191776.1-3;Parent=gene-LU631_RS12675;Dbxref=Genbank:WP_016191776.1;Name=WP_016191776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185017.1;locus_tag=LU631_RS12675;product=phage tail assembly protein;protein_id=WP_016191776.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2366633 2366992 . - . ID=gene-LU631_RS12680;Name=LU631_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12680;old_locus_tag=LU631_12680 NZ_CP089940.1 Protein Homology CDS 2366633 2366992 . - 0 ID=cds-WP_016191775.1-3;Parent=gene-LU631_RS12680;Dbxref=Genbank:WP_016191775.1;Name=WP_016191775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185016.1;locus_tag=LU631_RS12680;product=phage tail tube protein;protein_id=WP_016191775.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2367002 2368468 . - . ID=gene-LU631_RS12685;Name=LU631_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12685;old_locus_tag=LU631_12685 NZ_CP089940.1 Protein Homology CDS 2367002 2368468 . - 0 ID=cds-WP_016191774.1-3;Parent=gene-LU631_RS12685;Dbxref=Genbank:WP_016191774.1;Name=WP_016191774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185015.1;locus_tag=LU631_RS12685;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_016191774.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2368468 2368647 . - . ID=gene-LU631_RS12690;Name=LU631_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12690;old_locus_tag=LU631_12690 NZ_CP089940.1 Protein Homology CDS 2368468 2368647 . - 0 ID=cds-WP_016191773.1-3;Parent=gene-LU631_RS12690;Dbxref=Genbank:WP_016191773.1;Name=WP_016191773.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022401.2;locus_tag=LU631_RS12690;product=DUF2635 domain-containing protein;protein_id=WP_016191773.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2368640 2369206 . - . ID=gene-LU631_RS12695;Name=LU631_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12695;old_locus_tag=LU631_12695 NZ_CP089940.1 Protein Homology CDS 2368640 2369206 . - 0 ID=cds-WP_016191772.1-3;Parent=gene-LU631_RS12695;Dbxref=Genbank:WP_016191772.1;Name=WP_016191772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185013.1;locus_tag=LU631_RS12695;product=DUF1834 family protein;protein_id=WP_016191772.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2369208 2369660 . - . ID=gene-LU631_RS12700;Name=LU631_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12700;old_locus_tag=LU631_12700 NZ_CP089940.1 Protein Homology CDS 2369208 2369660 . - 0 ID=cds-WP_016191771.1-3;Parent=gene-LU631_RS12700;Dbxref=Genbank:WP_016191771.1;Name=WP_016191771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185012.1;locus_tag=LU631_RS12700;product=DUF1320 family protein;protein_id=WP_016191771.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2369657 2370124 . - . ID=gene-LU631_RS12705;Name=LU631_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12705;old_locus_tag=LU631_12705 NZ_CP089940.1 Protein Homology CDS 2369657 2370124 . - 0 ID=cds-WP_016191770.1-3;Parent=gene-LU631_RS12705;Dbxref=Genbank:WP_016191770.1;Name=WP_016191770.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036841.2;locus_tag=LU631_RS12705;product=HI1506-related protein;protein_id=WP_016191770.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2370202 2371125 . - . ID=gene-LU631_RS12710;Name=LU631_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12710;old_locus_tag=LU631_12710 NZ_CP089940.1 Protein Homology CDS 2370202 2371125 . - 0 ID=cds-WP_040465662.1-2;Parent=gene-LU631_RS12710;Dbxref=Genbank:WP_040465662.1;Name=WP_040465662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185010.1;locus_tag=LU631_RS12710;product=Mu-like prophage major head subunit gpT family protein;protein_id=WP_040465662.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2371125 2372321 . - . ID=gene-LU631_RS12715;Name=LU631_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12715;old_locus_tag=LU631_12715 NZ_CP089940.1 Protein Homology CDS 2371125 2372321 . - 0 ID=cds-WP_016191767.1-2;Parent=gene-LU631_RS12715;Dbxref=Genbank:WP_016191767.1;Name=WP_016191767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185009.1;locus_tag=LU631_RS12715;product=phage protease;protein_id=WP_016191767.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2372479 2372946 . - . ID=gene-LU631_RS12720;Name=LU631_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12720;old_locus_tag=LU631_12720 NZ_CP089940.1 Protein Homology CDS 2372479 2372946 . - 0 ID=cds-WP_016191766.1-2;Parent=gene-LU631_RS12720;Dbxref=Genbank:WP_016191766.1;Name=WP_016191766.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185008.1;locus_tag=LU631_RS12720;product=phage virion morphogenesis protein;protein_id=WP_016191766.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2372947 2374112 . - . ID=gene-LU631_RS12725;Name=LU631_RS12725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12725;old_locus_tag=LU631_12725;pseudo=true NZ_CP089940.1 Protein Homology CDS 2372947 2374112 . - 0 ID=cds-LU631_RS12725;Parent=gene-LU631_RS12725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016148.2;locus_tag=LU631_RS12725;product=phage minor head protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2374252 2375835 . - . ID=gene-LU631_RS12730;Name=LU631_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12730;old_locus_tag=LU631_12730 NZ_CP089940.1 Protein Homology CDS 2374252 2375835 . - 0 ID=cds-WP_016191763.1-2;Parent=gene-LU631_RS12730;Dbxref=Genbank:WP_016191763.1;Name=WP_016191763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185007.1;locus_tag=LU631_RS12730;product=DUF935 domain-containing protein;protein_id=WP_016191763.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2375826 2377388 . - . ID=gene-LU631_RS12735;Name=LU631_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12735;old_locus_tag=LU631_12735 NZ_CP089940.1 Protein Homology CDS 2375826 2377388 . - 0 ID=cds-WP_016191762.1-2;Parent=gene-LU631_RS12735;Dbxref=Genbank:WP_016191762.1;Name=WP_016191762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185006.1;locus_tag=LU631_RS12735;product=terminase family protein;protein_id=WP_016191762.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2377388 2377960 . - . ID=gene-LU631_RS12740;Name=LU631_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12740;old_locus_tag=LU631_12740 NZ_CP089940.1 Protein Homology CDS 2377388 2377960 . - 0 ID=cds-WP_016191761.1-2;Parent=gene-LU631_RS12740;Dbxref=Genbank:WP_016191761.1;Name=WP_016191761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185005.1;locus_tag=LU631_RS12740;product=DUF3486 family protein;protein_id=WP_016191761.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2377962 2378249 . - . ID=gene-LU631_RS12745;Name=LU631_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12745;old_locus_tag=LU631_12745 NZ_CP089940.1 Protein Homology CDS 2377962 2378249 . - 0 ID=cds-WP_016191760.1-2;Parent=gene-LU631_RS12745;Dbxref=Genbank:WP_016191760.1;Name=WP_016191760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442919.1;locus_tag=LU631_RS12745;product=hypothetical protein;protein_id=WP_016191760.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2378252 2378545 . - . ID=gene-LU631_RS12750;Name=LU631_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12750;old_locus_tag=LU631_12750 NZ_CP089940.1 Protein Homology CDS 2378252 2378545 . - 0 ID=cds-WP_016191759.1-2;Parent=gene-LU631_RS12750;Dbxref=Genbank:WP_016191759.1;Name=WP_016191759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807466.1;locus_tag=LU631_RS12750;product=DUF2730 family protein;protein_id=WP_016191759.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2378538 2378762 . - . ID=gene-LU631_RS12755;Name=LU631_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12755;old_locus_tag=LU631_12755 NZ_CP089940.1 Protein Homology CDS 2378538 2378762 . - 0 ID=cds-WP_016191758.1-2;Parent=gene-LU631_RS12755;Dbxref=Genbank:WP_016191758.1;Name=WP_016191758.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF013427.2;locus_tag=LU631_RS12755;product=TraR/DksA C4-type zinc finger protein;protein_id=WP_016191758.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2378762 2379364 . - . ID=gene-LU631_RS12760;Name=LU631_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12760;old_locus_tag=LU631_12760 NZ_CP089940.1 GeneMarkS-2+ CDS 2378762 2379364 . - 0 ID=cds-WP_016191757.1-2;Parent=gene-LU631_RS12760;Dbxref=Genbank:WP_016191757.1;Name=WP_016191757.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS12760;product=hypothetical protein;protein_id=WP_016191757.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2379357 2379590 . - . ID=gene-LU631_RS12765;Name=LU631_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12765;old_locus_tag=LU631_12765 NZ_CP089940.1 Protein Homology CDS 2379357 2379590 . - 0 ID=cds-WP_016191756.1-2;Parent=gene-LU631_RS12765;Dbxref=Genbank:WP_016191756.1;Name=WP_016191756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185000.1;locus_tag=LU631_RS12765;product=hypothetical protein;protein_id=WP_016191756.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2379580 2379879 . - . ID=gene-LU631_RS12770;Name=LU631_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12770;old_locus_tag=LU631_12770 NZ_CP089940.1 Protein Homology CDS 2379580 2379879 . - 0 ID=cds-WP_016191755.1-2;Parent=gene-LU631_RS12770;Dbxref=Genbank:WP_016191755.1;Name=WP_016191755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184999.1;locus_tag=LU631_RS12770;product=hypothetical protein;protein_id=WP_016191755.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2379879 2380385 . - . ID=gene-LU631_RS12775;Name=LU631_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12775;old_locus_tag=LU631_12775 NZ_CP089940.1 Protein Homology CDS 2379879 2380385 . - 0 ID=cds-WP_016191754.1-2;Parent=gene-LU631_RS12775;Dbxref=Genbank:WP_016191754.1;Name=WP_016191754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184998.1;locus_tag=LU631_RS12775;product=glycoside hydrolase family 108 protein;protein_id=WP_016191754.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2380507 2380947 . - . ID=gene-LU631_RS12780;Name=LU631_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12780;old_locus_tag=LU631_12780 NZ_CP089940.1 Protein Homology CDS 2380507 2380947 . - 0 ID=cds-WP_016191753.1-2;Parent=gene-LU631_RS12780;Dbxref=Genbank:WP_016191753.1;Name=WP_016191753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184997.1;locus_tag=LU631_RS12780;product=transcriptional regulator;protein_id=WP_016191753.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2380944 2381453 . - . ID=gene-LU631_RS12785;Name=LU631_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12785;old_locus_tag=LU631_12785 NZ_CP089940.1 Protein Homology CDS 2380944 2381453 . - 0 ID=cds-WP_016191752.1-2;Parent=gene-LU631_RS12785;Dbxref=Genbank:WP_016191752.1;Name=WP_016191752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184995.1;locus_tag=LU631_RS12785;product=hypothetical protein;protein_id=WP_016191752.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2381450 2382004 . - . ID=gene-LU631_RS12790;Name=LU631_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12790;old_locus_tag=LU631_12790 NZ_CP089940.1 Protein Homology CDS 2381450 2382004 . - 0 ID=cds-WP_016191751.1-2;Parent=gene-LU631_RS12790;Dbxref=Genbank:WP_016191751.1;Name=WP_016191751.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018011.2;locus_tag=LU631_RS12790;product=regulatory protein GemA;protein_id=WP_016191751.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2382115 2382375 . - . ID=gene-LU631_RS12795;Name=LU631_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12795;old_locus_tag=LU631_12795 NZ_CP089940.1 GeneMarkS-2+ CDS 2382115 2382375 . - 0 ID=cds-WP_016191750.1-2;Parent=gene-LU631_RS12795;Dbxref=Genbank:WP_016191750.1;Name=WP_016191750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS12795;product=hypothetical protein;protein_id=WP_016191750.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2382377 2382991 . - . ID=gene-LU631_RS12800;Name=LU631_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12800;old_locus_tag=LU631_12800 NZ_CP089940.1 Protein Homology CDS 2382377 2382991 . - 0 ID=cds-WP_016191749.1-2;Parent=gene-LU631_RS12800;Dbxref=Genbank:WP_016191749.1;Name=WP_016191749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807477.1;locus_tag=LU631_RS12800;product=DUF3164 family protein;protein_id=WP_016191749.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2382984 2383226 . - . ID=gene-LU631_RS12805;Name=LU631_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12805;old_locus_tag=LU631_12805 NZ_CP089940.1 GeneMarkS-2+ CDS 2382984 2383226 . - 0 ID=cds-WP_016191748.1-2;Parent=gene-LU631_RS12805;Dbxref=Genbank:WP_016191748.1;Name=WP_016191748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS12805;product=hypothetical protein;protein_id=WP_016191748.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2383223 2383708 . - . ID=gene-LU631_RS12810;Name=LU631_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12810;old_locus_tag=LU631_12810 NZ_CP089940.1 Protein Homology CDS 2383223 2383708 . - 0 ID=cds-WP_233482000.1-2;Parent=gene-LU631_RS12810;Dbxref=Genbank:WP_233482000.1;Name=WP_233482000.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020643.2;locus_tag=LU631_RS12810;product=AAA family ATPase;protein_id=WP_233482000.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2383626 2384174 . - . ID=gene-LU631_RS12815;Name=LU631_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12815;old_locus_tag=LU631_12815 NZ_CP089940.1 GeneMarkS-2+ CDS 2383626 2384174 . - 0 ID=cds-WP_016191746.1-2;Parent=gene-LU631_RS12815;Dbxref=Genbank:WP_016191746.1;Name=WP_016191746.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS12815;product=DNA transposition protein;protein_id=WP_016191746.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2384177 2386159 . - . ID=gene-LU631_RS12820;Name=LU631_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12820;old_locus_tag=LU631_12820 NZ_CP089940.1 Protein Homology CDS 2384177 2386159 . - 0 ID=cds-WP_046372018.1;Parent=gene-LU631_RS12820;Dbxref=Genbank:WP_046372018.1;Name=WP_046372018.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF014911.2;locus_tag=LU631_RS12820;product=DNA-binding protein;protein_id=WP_046372018.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2386451 2387245 . + . ID=gene-LU631_RS12825;Name=LU631_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12825;old_locus_tag=LU631_12825 NZ_CP089940.1 Protein Homology CDS 2386451 2387245 . + 0 ID=cds-WP_016193257.1;Parent=gene-LU631_RS12825;Dbxref=Genbank:WP_016193257.1;Name=WP_016193257.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.2;locus_tag=LU631_RS12825;product=helix-turn-helix transcriptional regulator;protein_id=WP_016193257.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2387378 2388418 . - . ID=gene-LU631_RS12830;Name=LU631_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12830;old_locus_tag=LU631_12830 NZ_CP089940.1 Protein Homology CDS 2387378 2388418 . - 0 ID=cds-WP_046371791.1-10;Parent=gene-LU631_RS12830;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS12830;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2389013 2389156 . - . ID=gene-LU631_RS12835;Name=LU631_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12835;old_locus_tag=LU631_12835 NZ_CP089940.1 GeneMarkS-2+ CDS 2389013 2389156 . - 0 ID=cds-WP_157275265.1;Parent=gene-LU631_RS12835;Dbxref=Genbank:WP_157275265.1;Name=WP_157275265.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS12835;product=hypothetical protein;protein_id=WP_157275265.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2389155 2392679 . + . ID=gene-LU631_RS12840;Name=LU631_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12840;old_locus_tag=LU631_12840 NZ_CP089940.1 Protein Homology CDS 2389155 2392679 . + 0 ID=cds-WP_020323346.1;Parent=gene-LU631_RS12840;Dbxref=Genbank:WP_020323346.1;Name=WP_020323346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509531.1;locus_tag=LU631_RS12840;product=glycosyltransferase;protein_id=WP_020323346.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2392863 2393912 . - . ID=gene-LU631_RS12845;Name=LU631_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12845;old_locus_tag=LU631_12845 NZ_CP089940.1 Protein Homology CDS 2392863 2393912 . - 0 ID=cds-WP_020323345.1;Parent=gene-LU631_RS12845;Dbxref=Genbank:WP_020323345.1;Name=WP_020323345.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024880.2;locus_tag=LU631_RS12845;product=class I SAM-dependent methyltransferase;protein_id=WP_020323345.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2393899 2394756 . - . ID=gene-LU631_RS12850;Name=LU631_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12850;old_locus_tag=LU631_12850 NZ_CP089940.1 Protein Homology CDS 2393899 2394756 . - 0 ID=cds-WP_020323344.1;Parent=gene-LU631_RS12850;Dbxref=Genbank:WP_020323344.1;Name=WP_020323344.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014740.2;locus_tag=LU631_RS12850;product=NAD(P)-dependent oxidoreductase;protein_id=WP_020323344.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2394756 2395298 . - . ID=gene-LU631_RS12855;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=LU631_RS12855;old_locus_tag=LU631_12855 NZ_CP089940.1 Protein Homology CDS 2394756 2395298 . - 0 ID=cds-WP_020323343.1;Parent=gene-LU631_RS12855;Dbxref=Genbank:WP_020323343.1;Name=WP_020323343.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017347077.1;locus_tag=LU631_RS12855;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_020323343.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2395295 2396392 . - . ID=gene-LU631_RS12860;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=LU631_RS12860;old_locus_tag=LU631_12860 NZ_CP089940.1 Protein Homology CDS 2395295 2396392 . - 0 ID=cds-WP_020323342.1;Parent=gene-LU631_RS12860;Dbxref=Genbank:WP_020323342.1;Name=WP_020323342.1;Ontology_term=GO:0009243,GO:0047733;gbkey=CDS;gene=rfbG;go_function=CDP-glucose 4%2C6-dehydratase activity|0047733||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017347078.1;locus_tag=LU631_RS12860;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_020323342.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2396377 2397147 . - . ID=gene-LU631_RS12865;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=LU631_RS12865;old_locus_tag=LU631_12865 NZ_CP089940.1 Protein Homology CDS 2396377 2397147 . - 0 ID=cds-WP_020323341.1;Parent=gene-LU631_RS12865;Dbxref=Genbank:WP_020323341.1;Name=WP_020323341.1;Ontology_term=GO:0009103,GO:0047343;gbkey=CDS;gene=rfbF;go_function=glucose-1-phosphate cytidylyltransferase activity|0047343||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017347079.1;locus_tag=LU631_RS12865;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_020323341.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2397171 2397977 . - . ID=gene-LU631_RS12870;Name=LU631_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12870;old_locus_tag=LU631_12870 NZ_CP089940.1 Protein Homology CDS 2397171 2397977 . - 0 ID=cds-WP_020323340.1;Parent=gene-LU631_RS12870;Dbxref=Genbank:WP_020323340.1;Name=WP_020323340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017347080.1;locus_tag=LU631_RS12870;product=hypothetical protein;protein_id=WP_020323340.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2398246 2399214 . + . ID=gene-LU631_RS12875;Name=LU631_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12875;old_locus_tag=LU631_12875 NZ_CP089940.1 Protein Homology CDS 2398246 2399214 . + 0 ID=cds-WP_020323339.1;Parent=gene-LU631_RS12875;Dbxref=Genbank:WP_020323339.1;Name=WP_020323339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593927.1;locus_tag=LU631_RS12875;product=HNH endonuclease signature motif containing protein;protein_id=WP_020323339.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2399354 2400076 . + . ID=gene-LU631_RS12880;Name=LU631_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12880;old_locus_tag=LU631_12880 NZ_CP089940.1 Protein Homology CDS 2399354 2400076 . + 0 ID=cds-WP_020323338.1;Parent=gene-LU631_RS12880;Dbxref=Genbank:WP_020323338.1;Name=WP_020323338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800040.1;locus_tag=LU631_RS12880;product=RNA polymerase sigma factor FliA;protein_id=WP_020323338.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2400122 2400625 . + . ID=gene-LU631_RS12885;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=LU631_RS12885;old_locus_tag=LU631_12885 NZ_CP089940.1 Protein Homology CDS 2400122 2400625 . + 0 ID=cds-WP_020323337.1;Parent=gene-LU631_RS12885;Dbxref=Genbank:WP_020323337.1;Name=WP_020323337.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158108.1;locus_tag=LU631_RS12885;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_020323337.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2400715 2401701 . + . ID=gene-LU631_RS12890;Name=LU631_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12890;old_locus_tag=LU631_12890 NZ_CP089940.1 Protein Homology CDS 2400715 2401701 . + 0 ID=cds-WP_020323336.1;Parent=gene-LU631_RS12890;Dbxref=Genbank:WP_020323336.1;Name=WP_020323336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017347086.1;locus_tag=LU631_RS12890;product=D-cysteine desulfhydrase;protein_id=WP_020323336.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2401794 2402597 . + . ID=gene-LU631_RS12895;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=LU631_RS12895;old_locus_tag=LU631_12895 NZ_CP089940.1 Protein Homology CDS 2401794 2402597 . + 0 ID=cds-WP_020323335.1;Parent=gene-LU631_RS12895;Dbxref=Genbank:WP_020323335.1;Name=WP_020323335.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378234.1;locus_tag=LU631_RS12895;product=cystine ABC transporter substrate-binding protein;protein_id=WP_020323335.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2402597 2403265 . + . ID=gene-LU631_RS12900;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=LU631_RS12900;old_locus_tag=LU631_12900 NZ_CP089940.1 Protein Homology CDS 2402597 2403265 . + 0 ID=cds-WP_020323334.1;Parent=gene-LU631_RS12900;Dbxref=Genbank:WP_020323334.1;Name=WP_020323334.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323334.1;locus_tag=LU631_RS12900;product=cystine ABC transporter permease;protein_id=WP_020323334.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2403262 2403999 . + . ID=gene-LU631_RS12905;Name=yecC;gbkey=Gene;gene=yecC;gene_biotype=protein_coding;locus_tag=LU631_RS12905;old_locus_tag=LU631_12905 NZ_CP089940.1 Protein Homology CDS 2403262 2403999 . + 0 ID=cds-WP_020323333.1;Parent=gene-LU631_RS12905;Dbxref=Genbank:WP_020323333.1;Name=WP_020323333.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=yecC;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=LU631_RS12905;product=L-cystine ABC transporter ATP-binding protein YecC;protein_id=WP_020323333.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2405163 2412215 . + . ID=gene-LU631_RS12910;Name=LU631_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12910;old_locus_tag=LU631_12910 NZ_CP089940.1 Protein Homology CDS 2405163 2412215 . + 0 ID=cds-WP_157275264.1;Parent=gene-LU631_RS12910;Dbxref=Genbank:WP_157275264.1;Name=WP_157275264.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023351.2;locus_tag=LU631_RS12910;product=Ig-like domain-containing protein;protein_id=WP_157275264.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2412321 2416256 . - . ID=gene-LU631_RS12915;Name=putA;gbkey=Gene;gene=putA;gene_biotype=pseudogene;locus_tag=LU631_RS12915;old_locus_tag=LU631_12915;pseudo=true NZ_CP089940.1 Protein Homology CDS 2412321 2416256 . - 0 ID=cds-LU631_RS12915;Parent=gene-LU631_RS12915;Note=frameshifted;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415534.1;locus_tag=LU631_RS12915;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2416661 2418158 . + . ID=gene-LU631_RS12920;Name=putP;gbkey=Gene;gene=putP;gene_biotype=pseudogene;locus_tag=LU631_RS12920;old_locus_tag=LU631_12920;pseudo=true NZ_CP089940.1 Protein Homology CDS 2416661 2418158 . + 0 ID=cds-LU631_RS12920;Parent=gene-LU631_RS12920;Note=frameshifted;Ontology_term=GO:0015824,GO:0005298,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA;go_process=proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120217.1;locus_tag=LU631_RS12920;product=sodium/proline symporter PutP;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2418781 2419614 . + . ID=gene-LU631_RS12925;Name=LU631_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12925;old_locus_tag=LU631_12925 NZ_CP089940.1 Protein Homology CDS 2418781 2419614 . + 0 ID=cds-WP_020323329.1;Parent=gene-LU631_RS12925;Dbxref=Genbank:WP_020323329.1;Name=WP_020323329.1;Ontology_term=GO:0034755,GO:0005381,GO:0016020,GO:0033573;gbkey=CDS;go_component=membrane|0016020||IEA,high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202642.1;locus_tag=LU631_RS12925;product=FTR1 family protein;protein_id=WP_020323329.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2419651 2420769 . + . ID=gene-LU631_RS12930;Name=LU631_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12930;old_locus_tag=LU631_12930 NZ_CP089940.1 Protein Homology CDS 2419651 2420769 . + 0 ID=cds-WP_020323328.1;Parent=gene-LU631_RS12930;Dbxref=Genbank:WP_020323328.1;Name=WP_020323328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000154398.1;locus_tag=LU631_RS12930;product=iron uptake system protein EfeO;protein_id=WP_020323328.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2420776 2422062 . + . ID=gene-LU631_RS12935;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=LU631_RS12935;old_locus_tag=LU631_12935 NZ_CP089940.1 Protein Homology CDS 2420776 2422062 . + 0 ID=cds-WP_020323327.1;Parent=gene-LU631_RS12935;Dbxref=Genbank:WP_020323327.1;Name=WP_020323327.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667822.1;locus_tag=LU631_RS12935;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_020323327.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2422619 2423407 . + . ID=gene-LU631_RS12940;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=LU631_RS12940;old_locus_tag=LU631_12940 NZ_CP089940.1 Protein Homology CDS 2422619 2423407 . + 0 ID=cds-WP_020323326.1;Parent=gene-LU631_RS12940;Dbxref=Genbank:WP_020323326.1;Name=WP_020323326.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170085.1;locus_tag=LU631_RS12940;product=phosphate starvation-inducible protein PhoH;protein_id=WP_020323326.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2423568 2424005 . + . ID=gene-LU631_RS12945;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS12945;old_locus_tag=LU631_12945 NZ_CP089940.1 Protein Homology CDS 2423568 2424005 . + 0 ID=cds-WP_046372019.1;Parent=gene-LU631_RS12945;Dbxref=Genbank:WP_046372019.1;Name=WP_046372019.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS12945;product=IS200/IS605 family transposase;protein_id=WP_046372019.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2424680 2424767 . - . ID=gene-LU631_RS12950;Name=LU631_RS12950;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS12950;old_locus_tag=LU631_12950 NZ_CP089940.1 tRNAscan-SE tRNA 2424680 2424767 . - . ID=rna-LU631_RS12950;Parent=gene-LU631_RS12950;anticodon=(pos:complement(2424731..2424733));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS12950;product=tRNA-Ser NZ_CP089940.1 tRNAscan-SE exon 2424680 2424767 . - . ID=exon-LU631_RS12950-1;Parent=rna-LU631_RS12950;anticodon=(pos:complement(2424731..2424733));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS12950;product=tRNA-Ser NZ_CP089940.1 RefSeq gene 2425202 2425288 . - . ID=gene-LU631_RS12955;Name=LU631_RS12955;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS12955;old_locus_tag=LU631_12955 NZ_CP089940.1 tRNAscan-SE tRNA 2425202 2425288 . - . ID=rna-LU631_RS12955;Parent=gene-LU631_RS12955;anticodon=(pos:complement(2425252..2425254));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS12955;product=tRNA-Ser NZ_CP089940.1 tRNAscan-SE exon 2425202 2425288 . - . ID=exon-LU631_RS12955-1;Parent=rna-LU631_RS12955;anticodon=(pos:complement(2425252..2425254));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS12955;product=tRNA-Ser NZ_CP089940.1 RefSeq pseudogene 2425689 2426080 . + . ID=gene-LU631_RS12960;Name=ghrA;end_range=2426080,.;gbkey=Gene;gene=ghrA;gene_biotype=pseudogene;locus_tag=LU631_RS12960;old_locus_tag=LU631_12960;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2425689 2426080 . + 0 ID=cds-LU631_RS12960;Parent=gene-LU631_RS12960;Note=catalyzes the formation of glycolate and glycerate from glyoxylate and hydroxypyruvate%2C respectively%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2426080,.;gbkey=CDS;gene=ghrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802014.1;locus_tag=LU631_RS12960;partial=true;product=glyoxylate/hydroxypyruvate reductase GhrA;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2426230 2427444 . - . ID=gene-LU631_RS12965;Name=LU631_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12965;old_locus_tag=LU631_12965 NZ_CP089940.1 Protein Homology CDS 2426230 2427444 . - 0 ID=cds-WP_046372006.1-2;Parent=gene-LU631_RS12965;Dbxref=Genbank:WP_046372006.1;Name=WP_046372006.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS12965;product=IS91 family transposase;protein_id=WP_046372006.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2427453 2427593 . - . ID=gene-LU631_RS12970;Name=LU631_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12970;old_locus_tag=LU631_12970 NZ_CP089940.1 GeneMarkS-2+ CDS 2427453 2427593 . - 0 ID=cds-WP_161796965.1-12;Parent=gene-LU631_RS12970;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS12970;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2427991 2428527 . + . ID=gene-LU631_RS12975;Name=LU631_RS12975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12975;old_locus_tag=LU631_12975;partial=true;pseudo=true;start_range=.,2427991 NZ_CP089940.1 Protein Homology CDS 2427991 2428527 . + 0 ID=cds-LU631_RS12975;Parent=gene-LU631_RS12975;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017346364.1;locus_tag=LU631_RS12975;partial=true;product=NAD(P)-dependent oxidoreductase;pseudo=true;start_range=.,2427991;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2428578 2428957 . + . ID=gene-LU631_RS12980;Name=LU631_RS12980;end_range=2428957,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12980;old_locus_tag=LU631_12980;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2428578 2428957 . + 0 ID=cds-LU631_RS12980;Parent=gene-LU631_RS12980;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003824;end_range=2428957,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006358.1;locus_tag=LU631_RS12980;partial=true;product=PHP domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2429184 2429627 . + . ID=gene-LU631_RS12985;Name=LU631_RS12985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS12985;old_locus_tag=LU631_12985;partial=true;pseudo=true;start_range=.,2429184 NZ_CP089940.1 Protein Homology CDS 2429184 2429627 . + 0 ID=cds-LU631_RS12985;Parent=gene-LU631_RS12985;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF012464.2;locus_tag=LU631_RS12985;partial=true;product=recombinase family protein;pseudo=true;start_range=.,2429184;transl_table=11 NZ_CP089940.1 RefSeq gene 2429679 2430378 . - . ID=gene-LU631_RS12990;Name=LU631_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12990;old_locus_tag=LU631_12990 NZ_CP089940.1 Protein Homology CDS 2430106 2430378 . - 0 ID=cds-WP_233482019.1;Parent=gene-LU631_RS12990;Dbxref=Genbank:WP_233482019.1;Name=WP_233482019.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS12990;product=IS1 family transposase;protein_id=WP_233482019.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 2429679 2430104 . - 0 ID=cds-WP_233482019.1;Parent=gene-LU631_RS12990;Dbxref=Genbank:WP_233482019.1;Name=WP_233482019.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS12990;product=IS1 family transposase;protein_id=WP_233482019.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2430593 2431801 . + . ID=gene-LU631_RS12995;Name=LU631_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS12995;old_locus_tag=LU631_12995 NZ_CP089940.1 Protein Homology CDS 2430593 2431801 . + 0 ID=cds-WP_046372020.1;Parent=gene-LU631_RS12995;Dbxref=Genbank:WP_046372020.1;Name=WP_046372020.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS12995;product=IS256 family transposase;protein_id=WP_046372020.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2431813 2431995 . - . ID=gene-LU631_RS13000;Name=LU631_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13000;old_locus_tag=LU631_13000 NZ_CP089940.1 GeneMarkS-2+ CDS 2431813 2431995 . - 0 ID=cds-WP_020323316.1;Parent=gene-LU631_RS13000;Dbxref=Genbank:WP_020323316.1;Name=WP_020323316.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS13000;product=hypothetical protein;protein_id=WP_020323316.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2432135 2432611 . - . ID=gene-LU631_RS13005;Name=LU631_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13005;old_locus_tag=LU631_13005 NZ_CP089940.1 Protein Homology CDS 2432135 2432611 . - 0 ID=cds-WP_020323315.1;Parent=gene-LU631_RS13005;Dbxref=Genbank:WP_020323315.1;Name=WP_020323315.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008321055.1;locus_tag=LU631_RS13005;product=tyrosine-type recombinase/integrase;protein_id=WP_020323315.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2432603 2432860 . + . ID=gene-LU631_RS13010;Name=LU631_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13010;old_locus_tag=LU631_13010 NZ_CP089940.1 GeneMarkS-2+ CDS 2432603 2432860 . + 0 ID=cds-WP_020323314.1;Parent=gene-LU631_RS13010;Dbxref=Genbank:WP_020323314.1;Name=WP_020323314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS13010;product=hypothetical protein;protein_id=WP_020323314.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2433254 2433490 . + . ID=gene-LU631_RS13015;Name=LU631_RS13015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13015;old_locus_tag=LU631_13015;partial=true;pseudo=true;start_range=.,2433254 NZ_CP089940.1 Protein Homology CDS 2433254 2433490 . + 0 ID=cds-LU631_RS13015;Parent=gene-LU631_RS13015;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202635.1;locus_tag=LU631_RS13015;partial=true;product=phosphatase;pseudo=true;start_range=.,2433254;transl_table=11 NZ_CP089940.1 RefSeq gene 2433528 2434088 . + . ID=gene-LU631_RS13020;Name=LU631_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13020;old_locus_tag=LU631_13020 NZ_CP089940.1 Protein Homology CDS 2433528 2434088 . + 0 ID=cds-WP_020323312.1;Parent=gene-LU631_RS13020;Dbxref=Genbank:WP_020323312.1;Name=WP_020323312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001921.1;locus_tag=LU631_RS13020;product=molecular chaperone;protein_id=WP_020323312.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2434282 2434995 . + . ID=gene-LU631_RS13025;Name=LU631_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13025;old_locus_tag=LU631_13025 NZ_CP089940.1 Protein Homology CDS 2434282 2434995 . + 0 ID=cds-WP_020323311.1;Parent=gene-LU631_RS13025;Dbxref=Genbank:WP_020323311.1;Name=WP_020323311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017346348.1;locus_tag=LU631_RS13025;product=glutamine amidotransferase;protein_id=WP_020323311.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2435209 2436084 . + . ID=gene-LU631_RS13030;Name=LU631_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13030;old_locus_tag=LU631_13030 NZ_CP089940.1 Protein Homology CDS 2435209 2436084 . + 0 ID=cds-WP_071598955.1;Parent=gene-LU631_RS13030;Dbxref=Genbank:WP_071598955.1;Name=WP_071598955.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=LU631_RS13030;product=glycosyltransferase;protein_id=WP_071598955.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2436329 2437306 . + . ID=gene-LU631_RS13035;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=LU631_RS13035;old_locus_tag=LU631_13035 NZ_CP089940.1 Protein Homology CDS 2436329 2437306 . + 0 ID=cds-WP_020323309.1;Parent=gene-LU631_RS13035;Dbxref=Genbank:WP_020323309.1;Name=WP_020323309.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441189.1;locus_tag=LU631_RS13035;product=porphobilinogen synthase;protein_id=WP_020323309.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2438239 2439018 . + . ID=gene-LU631_RS13040;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=LU631_RS13040;old_locus_tag=LU631_13040 NZ_CP089940.1 Protein Homology CDS 2438239 2439018 . + 0 ID=cds-WP_020323308.1;Parent=gene-LU631_RS13040;Dbxref=Genbank:WP_020323308.1;Name=WP_020323308.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202561.1;locus_tag=LU631_RS13040;product=trehalose-phosphatase;protein_id=WP_020323308.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2439023 2440429 . + . ID=gene-LU631_RS13045;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=LU631_RS13045;old_locus_tag=LU631_13045 NZ_CP089940.1 Protein Homology CDS 2439023 2440429 . + 0 ID=cds-WP_020323306.1;Parent=gene-LU631_RS13045;Dbxref=Genbank:WP_020323306.1;Name=WP_020323306.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492802.1;locus_tag=LU631_RS13045;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_020323306.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2441356 2441709 . + . ID=gene-LU631_RS13050;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=LU631_RS13050;old_locus_tag=LU631_13050 NZ_CP089940.1 Protein Homology CDS 2441356 2441709 . + 0 ID=cds-WP_020323305.1;Parent=gene-LU631_RS13050;Dbxref=Genbank:WP_020323305.1;Name=WP_020323305.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158054.1;locus_tag=LU631_RS13050;product=flagellar transcriptional regulator FlhD;protein_id=WP_020323305.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2441709 2442287 . + . ID=gene-LU631_RS13055;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=LU631_RS13055;old_locus_tag=LU631_13055 NZ_CP089940.1 Protein Homology CDS 2441709 2442287 . + 0 ID=cds-WP_020323304.1;Parent=gene-LU631_RS13055;Dbxref=Genbank:WP_020323304.1;Name=WP_020323304.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158052.1;locus_tag=LU631_RS13055;product=flagellar transcriptional regulator FlhC;protein_id=WP_020323304.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2442420 2443307 . + . ID=gene-LU631_RS13060;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=LU631_RS13060;old_locus_tag=LU631_13060 NZ_CP089940.1 Protein Homology CDS 2442420 2443307 . + 0 ID=cds-WP_020323303.1;Parent=gene-LU631_RS13060;Dbxref=Genbank:WP_020323303.1;Name=WP_020323303.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158046.1;locus_tag=LU631_RS13060;product=flagellar motor stator protein MotA;protein_id=WP_020323303.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2443304 2444344 . + . ID=gene-LU631_RS13065;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=LU631_RS13065;old_locus_tag=LU631_13065 NZ_CP089940.1 Protein Homology CDS 2443304 2444344 . + 0 ID=cds-WP_020323302.1;Parent=gene-LU631_RS13065;Dbxref=Genbank:WP_020323302.1;Name=WP_020323302.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202556.1;locus_tag=LU631_RS13065;product=flagellar motor protein MotB;protein_id=WP_020323302.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2444355 2446346 . + . ID=gene-LU631_RS13070;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=LU631_RS13070;old_locus_tag=LU631_13070 NZ_CP089940.1 Protein Homology CDS 2444355 2446346 . + 0 ID=cds-WP_198292546.1;Parent=gene-LU631_RS13070;Dbxref=Genbank:WP_198292546.1;Name=WP_198292546.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358231.1;locus_tag=LU631_RS13070;product=chemotaxis protein CheA;protein_id=WP_198292546.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2446371 2446868 . + . ID=gene-LU631_RS13075;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=LU631_RS13075;old_locus_tag=LU631_13075 NZ_CP089940.1 Protein Homology CDS 2446371 2446868 . + 0 ID=cds-WP_020323300.1;Parent=gene-LU631_RS13075;Dbxref=Genbank:WP_020323300.1;Name=WP_020323300.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667848.1;locus_tag=LU631_RS13075;product=chemotaxis protein CheW;protein_id=WP_020323300.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2447405 2449084 . + . ID=gene-LU631_RS13080;Name=LU631_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13080;old_locus_tag=LU631_13080 NZ_CP089940.1 Protein Homology CDS 2447405 2449084 . + 0 ID=cds-WP_020323299.1;Parent=gene-LU631_RS13080;Dbxref=Genbank:WP_020323299.1;Name=WP_020323299.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849150.1;locus_tag=LU631_RS13080;product=methyl-accepting chemotaxis protein;protein_id=WP_020323299.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2449127 2450740 . + . ID=gene-LU631_RS13085;Name=LU631_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13085;old_locus_tag=LU631_13085 NZ_CP089940.1 Protein Homology CDS 2449127 2450740 . + 0 ID=cds-WP_020323298.1;Parent=gene-LU631_RS13085;Dbxref=Genbank:WP_020323298.1;Name=WP_020323298.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441207.1;locus_tag=LU631_RS13085;product=methyl-accepting chemotaxis protein;protein_id=WP_020323298.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2450766 2451638 . + . ID=gene-LU631_RS13090;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=LU631_RS13090;old_locus_tag=LU631_13090 NZ_CP089940.1 Protein Homology CDS 2450766 2451638 . + 0 ID=cds-WP_020323297.1;Parent=gene-LU631_RS13090;Dbxref=Genbank:WP_020323297.1;Name=WP_020323297.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158033.1;locus_tag=LU631_RS13090;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_020323297.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2451638 2452687 . + . ID=gene-LU631_RS13095;Name=LU631_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13095;old_locus_tag=LU631_13095 NZ_CP089940.1 Protein Homology CDS 2451638 2452687 . + 0 ID=cds-WP_020323296.1;Parent=gene-LU631_RS13095;Dbxref=Genbank:WP_020323296.1;Name=WP_020323296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=LU631_RS13095;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=WP_020323296.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2452737 2453126 . + . ID=gene-LU631_RS13100;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=LU631_RS13100;old_locus_tag=LU631_13100 NZ_CP089940.1 Protein Homology CDS 2452737 2453126 . + 0 ID=cds-WP_020323295.1;Parent=gene-LU631_RS13100;Dbxref=Genbank:WP_020323295.1;Name=WP_020323295.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=LU631_RS13100;product=chemotaxis response regulator CheY;protein_id=WP_020323295.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2453136 2453780 . + . ID=gene-LU631_RS13105;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=LU631_RS13105;old_locus_tag=LU631_13105 NZ_CP089940.1 Protein Homology CDS 2453136 2453780 . + 0 ID=cds-WP_020323294.1;Parent=gene-LU631_RS13105;Dbxref=Genbank:WP_020323294.1;Name=WP_020323294.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210872.1;locus_tag=LU631_RS13105;product=protein phosphatase CheZ;protein_id=WP_020323294.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2453989 2455134 . + . ID=gene-LU631_RS13110;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=LU631_RS13110;old_locus_tag=LU631_13110 NZ_CP089940.1 Protein Homology CDS 2453989 2455134 . + 0 ID=cds-WP_020323292.1;Parent=gene-LU631_RS13110;Dbxref=Genbank:WP_020323292.1;Name=WP_020323292.1;Ontology_term=GO:0001539;gbkey=CDS;gene=flhB;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802913.1;locus_tag=LU631_RS13110;product=flagellar biosynthesis protein FlhB;protein_id=WP_020323292.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2455134 2457215 . + . ID=gene-LU631_RS13115;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=LU631_RS13115;old_locus_tag=LU631_13115 NZ_CP089940.1 Protein Homology CDS 2455134 2457215 . + 0 ID=cds-WP_020323290.1;Parent=gene-LU631_RS13115;Dbxref=Genbank:WP_020323290.1;Name=WP_020323290.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=flhA;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202545.1;locus_tag=LU631_RS13115;product=flagellar biosynthesis protein FlhA;protein_id=WP_020323290.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2457215 2457613 . + . ID=gene-LU631_RS13120;Name=LU631_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13120;old_locus_tag=LU631_13120 NZ_CP089940.1 Protein Homology CDS 2457215 2457613 . + 0 ID=cds-WP_020323289.1;Parent=gene-LU631_RS13120;Dbxref=Genbank:WP_020323289.1;Name=WP_020323289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509484.1;locus_tag=LU631_RS13120;product=flagellar protein FlhE;protein_id=WP_020323289.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2457850 2459580 . - . ID=gene-LU631_RS13125;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=LU631_RS13125;old_locus_tag=LU631_13125 NZ_CP089940.1 Protein Homology CDS 2457850 2459580 . - 0 ID=cds-WP_020323288.1;Parent=gene-LU631_RS13125;Dbxref=Genbank:WP_020323288.1;Name=WP_020323288.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=LU631_RS13125;product=arginine--tRNA ligase;protein_id=WP_020323288.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2460198 2460758 . + . ID=gene-LU631_RS13130;Name=LU631_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13130;old_locus_tag=LU631_13130 NZ_CP089940.1 Protein Homology CDS 2460198 2460758 . + 0 ID=cds-WP_020323286.1;Parent=gene-LU631_RS13130;Dbxref=Genbank:WP_020323286.1;Name=WP_020323286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000024803.1;locus_tag=LU631_RS13130;product=VOC family protein;protein_id=WP_020323286.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2460753 2461903 . - . ID=gene-LU631_RS13135;Name=LU631_RS13135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13135;old_locus_tag=LU631_13135;pseudo=true NZ_CP089940.1 Protein Homology CDS 2460753 2461903 . - 0 ID=cds-LU631_RS13135;Parent=gene-LU631_RS13135;Note=frameshifted;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007889546.1;locus_tag=LU631_RS13135;product=PatB family C-S lyase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2462154 2462909 . + . ID=gene-LU631_RS13140;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=LU631_RS13140;old_locus_tag=LU631_13140 NZ_CP089940.1 Protein Homology CDS 2462154 2462909 . + 0 ID=cds-WP_020323285.1;Parent=gene-LU631_RS13140;Dbxref=Genbank:WP_020323285.1;Name=WP_020323285.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158007.1;locus_tag=LU631_RS13140;product=copper homeostasis protein CutC;protein_id=WP_020323285.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2463483 2463893 . - . ID=gene-LU631_RS13145;Name=LU631_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13145;old_locus_tag=LU631_13145 NZ_CP089940.1 GeneMarkS-2+ CDS 2463483 2463893 . - 0 ID=cds-WP_046372022.1;Parent=gene-LU631_RS13145;Dbxref=Genbank:WP_046372022.1;Name=WP_046372022.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS13145;product=hypothetical protein;protein_id=WP_046372022.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2463886 2464659 . - . ID=gene-LU631_RS13150;Name=LU631_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13150;old_locus_tag=LU631_13150 NZ_CP089940.1 Protein Homology CDS 2463886 2464659 . - 0 ID=cds-WP_046372023.1;Parent=gene-LU631_RS13150;Dbxref=Genbank:WP_046372023.1;Name=WP_046372023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014538763.1;locus_tag=LU631_RS13150;product=hypothetical protein;protein_id=WP_046372023.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2464627 2464755 . + . ID=gene-LU631_RS13155;Name=LU631_RS13155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13155;old_locus_tag=LU631_13155;partial=true;pseudo=true;start_range=.,2464627 NZ_CP089940.1 Protein Homology CDS 2464627 2464755 . + 0 ID=cds-LU631_RS13155;Parent=gene-LU631_RS13155;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539816.1;locus_tag=LU631_RS13155;partial=true;product=cytochrome B;pseudo=true;start_range=.,2464627;transl_table=11 NZ_CP089940.1 RefSeq gene 2465310 2466278 . - . ID=gene-LU631_RS13160;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=LU631_RS13160;old_locus_tag=LU631_13160 NZ_CP089940.1 Protein Homology CDS 2465310 2466278 . - 0 ID=cds-WP_040465822.1;Parent=gene-LU631_RS13160;Dbxref=Genbank:WP_040465822.1;Name=WP_040465822.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105095.1;locus_tag=LU631_RS13160;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_040465822.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2466275 2467015 . - . ID=gene-LU631_RS13165;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=LU631_RS13165;old_locus_tag=LU631_13165 NZ_CP089940.1 Protein Homology CDS 2466275 2467015 . - 0 ID=cds-WP_020323281.1;Parent=gene-LU631_RS13165;Dbxref=Genbank:WP_020323281.1;Name=WP_020323281.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544464.1;locus_tag=LU631_RS13165;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_020323281.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2467154 2467441 . - . ID=gene-LU631_RS13170;Name=LU631_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13170;old_locus_tag=LU631_13170 NZ_CP089940.1 Protein Homology CDS 2467154 2467441 . - 0 ID=cds-WP_020323280.1;Parent=gene-LU631_RS13170;Dbxref=Genbank:WP_020323280.1;Name=WP_020323280.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013304.2;locus_tag=LU631_RS13170;product=MAPEG family protein;protein_id=WP_020323280.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2467564 2468388 . - . ID=gene-LU631_RS13175;Name=LU631_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13175;old_locus_tag=LU631_13175 NZ_CP089940.1 Protein Homology CDS 2467564 2468388 . - 0 ID=cds-WP_020323279.1;Parent=gene-LU631_RS13175;Dbxref=Genbank:WP_020323279.1;Name=WP_020323279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170035.1;locus_tag=LU631_RS13175;product=DUF72 domain-containing protein;protein_id=WP_020323279.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2468481 2469035 . - . ID=gene-LU631_RS13180;Name=LU631_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13180;old_locus_tag=LU631_13180 NZ_CP089940.1 Protein Homology CDS 2468481 2469035 . - 0 ID=cds-WP_020323278.1;Parent=gene-LU631_RS13180;Dbxref=Genbank:WP_020323278.1;Name=WP_020323278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145564.1;locus_tag=LU631_RS13180;product=hydrolase;protein_id=WP_020323278.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2469313 2471112 . + . ID=gene-LU631_RS13185;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=LU631_RS13185;old_locus_tag=LU631_13185 NZ_CP089940.1 Protein Homology CDS 2469313 2471112 . + 0 ID=cds-WP_020323277.1;Parent=gene-LU631_RS13185;Dbxref=Genbank:WP_020323277.1;Name=WP_020323277.1;Ontology_term=GO:0006422,GO:0004815,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365922.1;locus_tag=LU631_RS13185;product=aspartate--tRNA ligase;protein_id=WP_020323277.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2471112 2471546 . + . ID=gene-LU631_RS13190;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=LU631_RS13190;old_locus_tag=LU631_13190 NZ_CP089940.1 Protein Homology CDS 2471112 2471546 . + 0 ID=cds-WP_020323276.1;Parent=gene-LU631_RS13190;Dbxref=Genbank:WP_020323276.1;Name=WP_020323276.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667873.1;locus_tag=LU631_RS13190;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_020323276.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2471693 2472436 . + . ID=gene-LU631_RS13195;Name=LU631_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13195;old_locus_tag=LU631_13195 NZ_CP089940.1 Protein Homology CDS 2471693 2472436 . + 0 ID=cds-WP_020323275.1;Parent=gene-LU631_RS13195;Dbxref=Genbank:WP_020323275.1;Name=WP_020323275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227699.1;locus_tag=LU631_RS13195;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_020323275.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2472468 2472992 . + . ID=gene-LU631_RS13200;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=LU631_RS13200;old_locus_tag=LU631_13200 NZ_CP089940.1 Protein Homology CDS 2472468 2472992 . + 0 ID=cds-WP_020323274.1;Parent=gene-LU631_RS13200;Dbxref=Genbank:WP_020323274.1;Name=WP_020323274.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460855.1;locus_tag=LU631_RS13200;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_020323274.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2473118 2473735 . + . ID=gene-LU631_RS13205;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=LU631_RS13205;old_locus_tag=LU631_13205 NZ_CP089940.1 Protein Homology CDS 2473118 2473735 . + 0 ID=cds-WP_020323273.1;Parent=gene-LU631_RS13205;Dbxref=Genbank:WP_020323273.1;Name=WP_020323273.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460852.1;locus_tag=LU631_RS13205;product=Holliday junction branch migration protein RuvA;protein_id=WP_020323273.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2473744 2474748 . + . ID=gene-LU631_RS13210;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=LU631_RS13210;old_locus_tag=LU631_13210 NZ_CP089940.1 Protein Homology CDS 2473744 2474748 . + 0 ID=cds-WP_020323272.1;Parent=gene-LU631_RS13210;Dbxref=Genbank:WP_020323272.1;Name=WP_020323272.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013026077.1;locus_tag=LU631_RS13210;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_020323272.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2475259 2476044 . - . ID=gene-LU631_RS13215;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=LU631_RS13215;old_locus_tag=LU631_13215 NZ_CP089940.1 Protein Homology CDS 2475259 2476044 . - 0 ID=cds-WP_020323271.1;Parent=gene-LU631_RS13215;Dbxref=Genbank:WP_020323271.1;Name=WP_020323271.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017346518.1;locus_tag=LU631_RS13215;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_020323271.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2476041 2476793 . - . ID=gene-LU631_RS13220;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=LU631_RS13220;old_locus_tag=LU631_13220 NZ_CP089940.1 Protein Homology CDS 2476041 2476793 . - 0 ID=cds-WP_020323270.1;Parent=gene-LU631_RS13220;Dbxref=Genbank:WP_020323270.1;Name=WP_020323270.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008453942.1;locus_tag=LU631_RS13220;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_020323270.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2476871 2477818 . + . ID=gene-LU631_RS13225;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=LU631_RS13225;old_locus_tag=LU631_13225 NZ_CP089940.1 Protein Homology CDS 2476871 2477818 . + 0 ID=cds-WP_020323269.1;Parent=gene-LU631_RS13225;Dbxref=Genbank:WP_020323269.1;Name=WP_020323269.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120274.1;locus_tag=LU631_RS13225;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_020323269.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2477830 2479158 . + . ID=gene-LU631_RS13230;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=LU631_RS13230;old_locus_tag=LU631_13230 NZ_CP089940.1 Protein Homology CDS 2477830 2479158 . + 0 ID=cds-WP_020323268.1;Parent=gene-LU631_RS13230;Dbxref=Genbank:WP_020323268.1;Name=WP_020323268.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849215.1;locus_tag=LU631_RS13230;product=murein DD-endopeptidase MepM;protein_id=WP_020323268.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2479780 2480751 . + . ID=gene-LU631_RS13235;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=LU631_RS13235;old_locus_tag=LU631_13235 NZ_CP089940.1 Protein Homology CDS 2479780 2480751 . + 0 ID=cds-WP_020323266.1;Parent=gene-LU631_RS13235;Dbxref=Genbank:WP_020323266.1;Name=WP_020323266.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009245,GO:0016746;gbkey=CDS;gene=lpxM;go_function=acyltransferase activity|0016746||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105099.1;locus_tag=LU631_RS13235;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_020323266.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2480931 2482166 . - . ID=gene-LU631_RS13240;Name=LU631_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13240;old_locus_tag=LU631_13240 NZ_CP089940.1 Protein Homology CDS 2480931 2482166 . - 0 ID=cds-WP_020323265.1;Parent=gene-LU631_RS13240;Dbxref=Genbank:WP_020323265.1;Name=WP_020323265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009636528.1;locus_tag=LU631_RS13240;product=MFS transporter;protein_id=WP_020323265.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2482259 2482399 . - . ID=gene-LU631_RS13245;Name=LU631_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13245;old_locus_tag=LU631_13245 NZ_CP089940.1 GeneMarkS-2+ CDS 2482259 2482399 . - 0 ID=cds-WP_198292548.1;Parent=gene-LU631_RS13245;Dbxref=Genbank:WP_198292548.1;Name=WP_198292548.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS13245;product=hypothetical protein;protein_id=WP_198292548.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2482519 2483961 . - . ID=gene-LU631_RS13250;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=LU631_RS13250;old_locus_tag=LU631_13250 NZ_CP089940.1 Protein Homology CDS 2482519 2483961 . - 0 ID=cds-WP_020323263.1;Parent=gene-LU631_RS13250;Dbxref=Genbank:WP_020323263.1;Name=WP_020323263.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416368.1;locus_tag=LU631_RS13250;product=pyruvate kinase;protein_id=WP_020323263.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2484065 2484943 . - . ID=gene-LU631_RS13255;Name=LU631_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13255;old_locus_tag=LU631_13255 NZ_CP089940.1 Protein Homology CDS 2484065 2484943 . - 0 ID=cds-WP_020323262.1;Parent=gene-LU631_RS13255;Dbxref=Genbank:WP_020323262.1;Name=WP_020323262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202514.1;locus_tag=LU631_RS13255;product=MurR/RpiR family transcriptional regulator;protein_id=WP_020323262.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2485305 2486780 . + . ID=gene-LU631_RS13260;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=LU631_RS13260;old_locus_tag=LU631_13260 NZ_CP089940.1 Protein Homology CDS 2485305 2486780 . + 0 ID=cds-WP_020323261.1;Parent=gene-LU631_RS13260;Dbxref=Genbank:WP_020323261.1;Name=WP_020323261.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=LU631_RS13260;product=glucose-6-phosphate dehydrogenase;protein_id=WP_020323261.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2487068 2487706 . + . ID=gene-LU631_RS13265;Name=LU631_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13265;old_locus_tag=LU631_13265 NZ_CP089940.1 Protein Homology CDS 2487068 2487706 . + 0 ID=cds-WP_020323260.1;Parent=gene-LU631_RS13265;Dbxref=Genbank:WP_020323260.1;Name=WP_020323260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948904.1;locus_tag=LU631_RS13265;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_020323260.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2487951 2489129 . - . ID=gene-LU631_RS13270;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=LU631_RS13270;old_locus_tag=LU631_13270 NZ_CP089940.1 Protein Homology CDS 2487951 2489129 . - 0 ID=cds-WP_020323259.1;Parent=gene-LU631_RS13270;Dbxref=Genbank:WP_020323259.1;Name=WP_020323259.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120282.1;locus_tag=LU631_RS13270;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_020323259.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2489273 2490493 . - . ID=gene-LU631_RS13275;Name=LU631_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13275;old_locus_tag=LU631_13275 NZ_CP089940.1 Protein Homology CDS 2489273 2490493 . - 0 ID=cds-WP_046371929.1-4;Parent=gene-LU631_RS13275;Dbxref=Genbank:WP_046371929.1;Name=WP_046371929.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343765.1;locus_tag=LU631_RS13275;product=ISL3 family transposase;protein_id=WP_046371929.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2490527 2491234 . - . ID=gene-LU631_RS13280;Name=LU631_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13280;old_locus_tag=LU631_13280 NZ_CP089940.1 Protein Homology CDS 2490527 2491234 . - 0 ID=cds-WP_046372024.1;Parent=gene-LU631_RS13280;Dbxref=Genbank:WP_046372024.1;Name=WP_046372024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308877.1;locus_tag=LU631_RS13280;product=M91 family zinc metallopeptidase;protein_id=WP_046372024.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2491346 2491708 . + . ID=gene-LU631_RS13285;Name=LU631_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13285;old_locus_tag=LU631_13285 NZ_CP089940.1 Protein Homology CDS 2491346 2491708 . + 0 ID=cds-WP_020323258.1;Parent=gene-LU631_RS13285;Dbxref=Genbank:WP_020323258.1;Name=WP_020323258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009634990.1;locus_tag=LU631_RS13285;product=YebG family protein;protein_id=WP_020323258.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2491776 2492577 . - . ID=gene-LU631_RS13290;Name=LU631_RS13290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13290;old_locus_tag=LU631_13290;pseudo=true NZ_CP089940.1 Protein Homology CDS 2491776 2492577 . - 0 ID=cds-LU631_RS13290;Parent=gene-LU631_RS13290;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202509.1;locus_tag=LU631_RS13290;product=TIM barrel protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2492862 2493515 . + . ID=gene-LU631_RS13295;Name=LU631_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13295;old_locus_tag=LU631_13295 NZ_CP089940.1 Protein Homology CDS 2492862 2493515 . + 0 ID=cds-WP_020323257.1;Parent=gene-LU631_RS13295;Dbxref=Genbank:WP_020323257.1;Name=WP_020323257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202508.1;locus_tag=LU631_RS13295;product=DUF533 domain-containing protein;protein_id=WP_020323257.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2493641 2495719 . + . ID=gene-LU631_RS13300;Name=LU631_RS13300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13300;old_locus_tag=LU631_13300;pseudo=true NZ_CP089940.1 Protein Homology CDS 2493641 2495719 . + 0 ID=cds-LU631_RS13300;Parent=gene-LU631_RS13300;Note=internal stop;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441243.1;locus_tag=LU631_RS13300;product=prolyl oligopeptidase family serine peptidase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2495790 2496476 . - . ID=gene-LU631_RS13305;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=LU631_RS13305;old_locus_tag=LU631_13305 NZ_CP089940.1 Protein Homology CDS 2495790 2496476 . - 0 ID=cds-WP_020323256.1;Parent=gene-LU631_RS13305;Dbxref=Genbank:WP_020323256.1;Name=WP_020323256.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157914.1;locus_tag=LU631_RS13305;product=exodeoxyribonuclease X;protein_id=WP_020323256.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2496481 2497242 . - . ID=gene-LU631_RS13310;Name=LU631_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13310;old_locus_tag=LU631_13310 NZ_CP089940.1 Protein Homology CDS 2496481 2497242 . - 0 ID=cds-WP_020323255.1;Parent=gene-LU631_RS13310;Dbxref=Genbank:WP_020323255.1;Name=WP_020323255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202505.1;locus_tag=LU631_RS13310;product=carbon-nitrogen hydrolase family protein;protein_id=WP_020323255.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2497327 2497557 . - . ID=gene-LU631_RS13315;Name=LU631_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13315;old_locus_tag=LU631_13315 NZ_CP089940.1 Protein Homology CDS 2497327 2497557 . - 0 ID=cds-WP_020323254.1;Parent=gene-LU631_RS13315;Dbxref=Genbank:WP_020323254.1;Name=WP_020323254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916763.1;locus_tag=LU631_RS13315;product=DNA polymerase III subunit theta;protein_id=WP_020323254.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2497724 2498089 . + . ID=gene-LU631_RS13320;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=LU631_RS13320;old_locus_tag=LU631_13320 NZ_CP089940.1 Protein Homology CDS 2497724 2498089 . + 0 ID=cds-WP_152664275.1;Parent=gene-LU631_RS13320;Dbxref=Genbank:WP_152664275.1;Name=WP_152664275.1;Ontology_term=GO:0006825,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202503.1;locus_tag=LU631_RS13320;product=CopC domain-containing protein YobA;protein_id=WP_152664275.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2498127 2498966 . + . ID=gene-LU631_RS13325;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=LU631_RS13325;old_locus_tag=LU631_13325 NZ_CP089940.1 Protein Homology CDS 2498127 2498966 . + 0 ID=cds-WP_232426917.1;Parent=gene-LU631_RS13325;Dbxref=Genbank:WP_232426917.1;Name=WP_232426917.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: protein motif:HMM:NF033808.0;locus_tag=LU631_RS13325;product=copper homeostasis membrane protein CopD;protein_id=WP_232426917.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2499021 2499371 . + . ID=gene-LU631_RS13330;Name=LU631_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13330;old_locus_tag=LU631_13330 NZ_CP089940.1 Protein Homology CDS 2499021 2499371 . + 0 ID=cds-WP_020323251.1;Parent=gene-LU631_RS13330;Dbxref=Genbank:WP_020323251.1;Name=WP_020323251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008453983.1;locus_tag=LU631_RS13330;product=YebY family protein;protein_id=WP_020323251.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2499727 2499870 . + . ID=gene-LU631_RS13335;Name=LU631_RS13335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13335;old_locus_tag=LU631_13335;partial=true;pseudo=true;start_range=.,2499727 NZ_CP089940.1 Protein Homology CDS 2499727 2499870 . + 0 ID=cds-LU631_RS13335;Parent=gene-LU631_RS13335;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001031907.1;locus_tag=LU631_RS13335;partial=true;product=DUF2184 domain-containing protein;pseudo=true;start_range=.,2499727;transl_table=11 NZ_CP089940.1 RefSeq gene 2499931 2500278 . - . ID=gene-LU631_RS13340;Name=LU631_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13340;old_locus_tag=LU631_13340 NZ_CP089940.1 Protein Homology CDS 2499931 2500278 . - 0 ID=cds-WP_020323248.1;Parent=gene-LU631_RS13340;Dbxref=Genbank:WP_020323248.1;Name=WP_020323248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014728194.1;locus_tag=LU631_RS13340;product=DUF1493 family protein;protein_id=WP_020323248.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2500269 2500564 . - . ID=gene-LU631_RS13345;Name=LU631_RS13345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13345;old_locus_tag=LU631_13345;pseudo=true NZ_CP089940.1 Protein Homology CDS 2500269 2500564 . - 0 ID=cds-LU631_RS13345;Parent=gene-LU631_RS13345;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012815406.1;locus_tag=LU631_RS13345;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2500781 2502089 . - . ID=gene-LU631_RS13350;Name=LU631_RS13350;end_range=2502089,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13350;old_locus_tag=LU631_13350;partial=true;pseudo=true;start_range=.,2500781 NZ_CP089940.1 Protein Homology CDS 2500781 2502089 . - 0 ID=cds-LU631_RS13350;Parent=gene-LU631_RS13350;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2502089,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001326728.1;locus_tag=LU631_RS13350;partial=true;product=MlaD family protein;pseudo=true;start_range=.,2500781;transl_table=11 NZ_CP089940.1 RefSeq gene 2502483 2502983 . + . ID=gene-LU631_RS13355;Name=LU631_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13355;old_locus_tag=LU631_13355 NZ_CP089940.1 Protein Homology CDS 2502483 2502983 . + 0 ID=cds-WP_040465820.1;Parent=gene-LU631_RS13355;Dbxref=Genbank:WP_040465820.1;Name=WP_040465820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010258773.1;locus_tag=LU631_RS13355;product=GAF domain-containing protein;protein_id=WP_040465820.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2503080 2503766 . + . ID=gene-LU631_RS13360;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=LU631_RS13360;old_locus_tag=LU631_13360 NZ_CP089940.1 Protein Homology CDS 2503080 2503766 . + 0 ID=cds-WP_020323243.1;Parent=gene-LU631_RS13360;Dbxref=Genbank:WP_020323243.1;Name=WP_020323243.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157889.1;locus_tag=LU631_RS13360;product=RNA chaperone ProQ;protein_id=WP_020323243.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2503786 2505825 . + . ID=gene-LU631_RS13365;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=LU631_RS13365;old_locus_tag=LU631_13365 NZ_CP089940.1 Protein Homology CDS 2503786 2505825 . + 0 ID=cds-WP_020323242.1;Parent=gene-LU631_RS13365;Dbxref=Genbank:WP_020323242.1;Name=WP_020323242.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358110.1;locus_tag=LU631_RS13365;product=carboxy terminal-processing peptidase;protein_id=WP_020323242.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2506190 2506576 . + . ID=gene-LU631_RS13370;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS13370;old_locus_tag=LU631_13370;pseudo=true NZ_CP089940.1 Protein Homology CDS 2506190 2506576 . + 0 ID=cds-LU631_RS13370;Parent=gene-LU631_RS13370;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS13370;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2506813 2507694 . + . ID=gene-LU631_RS13375;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=LU631_RS13375;old_locus_tag=LU631_13375 NZ_CP089940.1 Protein Homology CDS 2506813 2507694 . + 0 ID=cds-WP_020323239.1;Parent=gene-LU631_RS13375;Dbxref=Genbank:WP_020323239.1;Name=WP_020323239.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=LU631_RS13375;product=protease HtpX;protein_id=WP_020323239.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2507760 2509136 . - . ID=gene-LU631_RS13380;Name=LU631_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13380;old_locus_tag=LU631_13380 NZ_CP089940.1 Protein Homology CDS 2507760 2509136 . - 0 ID=cds-WP_046372025.1;Parent=gene-LU631_RS13380;Dbxref=Genbank:WP_046372025.1;Name=WP_046372025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202486.1;locus_tag=LU631_RS13380;product=MFS transporter;protein_id=WP_046372025.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2509330 2510121 . + . ID=gene-LU631_RS13385;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=LU631_RS13385;old_locus_tag=LU631_13385 NZ_CP089940.1 Protein Homology CDS 2509330 2510121 . + 0 ID=cds-WP_020323237.1;Parent=gene-LU631_RS13385;Dbxref=Genbank:WP_020323237.1;Name=WP_020323237.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310564.1;locus_tag=LU631_RS13385;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_020323237.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2510157 2510393 . - . ID=gene-LU631_RS13390;Name=LU631_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13390;old_locus_tag=LU631_13390 NZ_CP089940.1 Protein Homology CDS 2510157 2510393 . - 0 ID=cds-WP_020323236.1;Parent=gene-LU631_RS13390;Dbxref=Genbank:WP_020323236.1;Name=WP_020323236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157886.1;locus_tag=LU631_RS13390;product=YobH family protein;protein_id=WP_020323236.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2510631 2510891 . + . ID=gene-LU631_RS13395;Name=LU631_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13395;old_locus_tag=LU631_13395 NZ_CP089940.1 Protein Homology CDS 2510631 2510891 . + 0 ID=cds-WP_040465825.1;Parent=gene-LU631_RS13395;Dbxref=Genbank:WP_040465825.1;Name=WP_040465825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202483.1;locus_tag=LU631_RS13395;product=YebO family protein;protein_id=WP_040465825.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2510913 2511859 . + . ID=gene-LU631_RS13400;Name=LU631_RS13400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13400;old_locus_tag=LU631_13400;pseudo=true NZ_CP089940.1 Protein Homology CDS 2510913 2511859 . + 0 ID=cds-LU631_RS13400;Parent=gene-LU631_RS13400;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169986.1;locus_tag=LU631_RS13400;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2512575 2512784 . + . ID=gene-LU631_RS13405;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=LU631_RS13405;old_locus_tag=LU631_13405 NZ_CP089940.1 Protein Homology CDS 2512575 2512784 . + 0 ID=cds-WP_001062678.1;Parent=gene-LU631_RS13405;Dbxref=Genbank:WP_001062678.1;Name=WP_001062678.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=LU631_RS13405;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2513273 2514100 . + . ID=gene-LU631_RS13410;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=LU631_RS13410;old_locus_tag=LU631_13410 NZ_CP089940.1 Protein Homology CDS 2513273 2514100 . + 0 ID=cds-WP_016192650.1;Parent=gene-LU631_RS13410;Dbxref=Genbank:WP_016192650.1;Name=WP_016192650.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007668597.1;locus_tag=LU631_RS13410;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_016192650.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2514929 2516494 . + . ID=gene-LU631_RS13415;Name=LU631_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13415;old_locus_tag=LU631_13415 NZ_CP089940.1 Protein Homology CDS 2514929 2516494 . + 0 ID=cds-WP_016192649.1;Parent=gene-LU631_RS13415;Dbxref=Genbank:WP_016192649.1;Name=WP_016192649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202475.1;locus_tag=LU631_RS13415;product=TerC family protein;protein_id=WP_016192649.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2516725 2518287 . - . ID=gene-LU631_RS13420;Name=LU631_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13420;old_locus_tag=LU631_13420 NZ_CP089940.1 Protein Homology CDS 2516725 2518287 . - 0 ID=cds-WP_016192648.1;Parent=gene-LU631_RS13420;Dbxref=Genbank:WP_016192648.1;Name=WP_016192648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593851.1;locus_tag=LU631_RS13420;product=cyclic diguanylate phosphodiesterase;protein_id=WP_016192648.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2518532 2519896 . - . ID=gene-LU631_RS13425;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=LU631_RS13425;old_locus_tag=LU631_13425 NZ_CP089940.1 Protein Homology CDS 2518532 2519896 . - 0 ID=cds-WP_016192647.1;Parent=gene-LU631_RS13425;Dbxref=Genbank:WP_016192647.1;Name=WP_016192647.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227643.1;locus_tag=LU631_RS13425;product=L-serine ammonia-lyase;protein_id=WP_016192647.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2520262 2520423 . - . ID=gene-LU631_RS13430;Name=LU631_RS13430;end_range=2520423,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13430;old_locus_tag=LU631_13430;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2520262 2520423 . - 0 ID=cds-LU631_RS13430;Parent=gene-LU631_RS13430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2520423,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157873.1;locus_tag=LU631_RS13430;partial=true;product=CoA pyrophosphatase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2520558 2520806 . - . ID=gene-LU631_RS13435;Name=LU631_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13435;old_locus_tag=LU631_13435 NZ_CP089940.1 Protein Homology CDS 2520558 2520806 . - 0 ID=cds-WP_072052782.1-3;Parent=gene-LU631_RS13435;Dbxref=Genbank:WP_072052782.1;Name=WP_072052782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500389.1;locus_tag=LU631_RS13435;product=ogr/Delta-like zinc finger family protein;protein_id=WP_072052782.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2520845 2521981 . - . ID=gene-LU631_RS13440;Name=LU631_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13440;old_locus_tag=LU631_13440 NZ_CP089940.1 Protein Homology CDS 2520845 2521981 . - 0 ID=cds-WP_046371821.1-3;Parent=gene-LU631_RS13440;Dbxref=Genbank:WP_046371821.1;Name=WP_046371821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117906.1;locus_tag=LU631_RS13440;product=phage late control D family protein;protein_id=WP_046371821.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2522132 2523313 . + . ID=gene-LU631_RS13445;Name=LU631_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13445;old_locus_tag=LU631_13445 NZ_CP089940.1 Protein Homology CDS 2522132 2523313 . + 0 ID=cds-WP_046372026.1-2;Parent=gene-LU631_RS13445;Dbxref=Genbank:WP_046372026.1;Name=WP_046372026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094145.1;locus_tag=LU631_RS13445;product=phage tail sheath family protein;protein_id=WP_046372026.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2523314 2523829 . + . ID=gene-LU631_RS13450;Name=LU631_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13450;old_locus_tag=LU631_13450 NZ_CP089940.1 Protein Homology CDS 2523314 2523829 . + 0 ID=cds-WP_046372027.1-2;Parent=gene-LU631_RS13450;Dbxref=Genbank:WP_046372027.1;Name=WP_046372027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009486472.1;locus_tag=LU631_RS13450;product=phage major tail tube protein;protein_id=WP_046372027.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2523878 2524195 . + . ID=gene-LU631_RS13455;Name=LU631_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13455;old_locus_tag=LU631_13455 NZ_CP089940.1 Protein Homology CDS 2523878 2524195 . + 0 ID=cds-WP_046372028.1-2;Parent=gene-LU631_RS13455;Dbxref=Genbank:WP_046372028.1;Name=WP_046372028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072463.1;locus_tag=LU631_RS13455;product=phage tail assembly protein;protein_id=WP_046372028.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2524201 2524356 . + . ID=gene-LU631_RS13460;Name=LU631_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13460;old_locus_tag=LU631_13460 NZ_CP089940.1 Protein Homology CDS 2524201 2524356 . + 0 ID=cds-WP_072052871.1-2;Parent=gene-LU631_RS13460;Dbxref=Genbank:WP_072052871.1;Name=WP_072052871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016940976.1;locus_tag=LU631_RS13460;product=GpE family phage tail protein;protein_id=WP_072052871.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2524343 2527314 . + . ID=gene-LU631_RS13465;Name=LU631_RS13465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13465;old_locus_tag=LU631_13465;pseudo=true NZ_CP089940.1 Protein Homology CDS 2524343 2527314 . + 0 ID=cds-LU631_RS13465;Parent=gene-LU631_RS13465;Note=frameshifted;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072464.1;locus_tag=LU631_RS13465;product=phage tail tape measure protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2527327 2527815 . + . ID=gene-LU631_RS13470;Name=LU631_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13470;old_locus_tag=LU631_13470 NZ_CP089940.1 Protein Homology CDS 2527327 2527815 . + 0 ID=cds-WP_016193199.1-3;Parent=gene-LU631_RS13470;Dbxref=Genbank:WP_016193199.1;Name=WP_016193199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001761054.1;locus_tag=LU631_RS13470;product=phage tail protein;protein_id=WP_016193199.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2527970 2528566 . - . ID=gene-LU631_RS13475;Name=LU631_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13475;old_locus_tag=LU631_13475 NZ_CP089940.1 Protein Homology CDS 2527970 2528566 . - 0 ID=cds-WP_016193200.1-2;Parent=gene-LU631_RS13475;Dbxref=Genbank:WP_016193200.1;Name=WP_016193200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243405.1;locus_tag=LU631_RS13475;product=tail fiber assembly protein;protein_id=WP_016193200.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2528566 2529567 . - . ID=gene-LU631_RS13480;Name=LU631_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13480;old_locus_tag=LU631_13480 NZ_CP089940.1 Protein Homology CDS 2528566 2529567 . - 0 ID=cds-WP_016193201.1-3;Parent=gene-LU631_RS13480;Dbxref=Genbank:WP_016193201.1;Name=WP_016193201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001580935.1;locus_tag=LU631_RS13480;product=phage tail protein;protein_id=WP_016193201.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2529557 2530171 . - . ID=gene-LU631_RS13485;Name=LU631_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13485;old_locus_tag=LU631_13485 NZ_CP089940.1 Protein Homology CDS 2529557 2530171 . - 0 ID=cds-WP_016193202.1-3;Parent=gene-LU631_RS13485;Dbxref=Genbank:WP_016193202.1;Name=WP_016193202.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001063585.1;locus_tag=LU631_RS13485;product=phage tail protein I;protein_id=WP_016193202.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2530164 2531060 . - . ID=gene-LU631_RS13490;Name=LU631_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13490;old_locus_tag=LU631_13490 NZ_CP089940.1 Protein Homology CDS 2530164 2531060 . - 0 ID=cds-WP_016193203.1-3;Parent=gene-LU631_RS13490;Dbxref=Genbank:WP_016193203.1;Name=WP_016193203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117898.1;locus_tag=LU631_RS13490;product=baseplate J/gp47 family protein;protein_id=WP_016193203.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2531047 2531415 . - . ID=gene-LU631_RS13495;Name=LU631_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13495;old_locus_tag=LU631_13495 NZ_CP089940.1 Protein Homology CDS 2531047 2531415 . - 0 ID=cds-WP_016193204.1-3;Parent=gene-LU631_RS13495;Dbxref=Genbank:WP_016193204.1;Name=WP_016193204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016940969.1;locus_tag=LU631_RS13495;product=GPW/gp25 family protein;protein_id=WP_016193204.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2531412 2531987 . - . ID=gene-LU631_RS13500;Name=LU631_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13500;old_locus_tag=LU631_13500 NZ_CP089940.1 Protein Homology CDS 2531412 2531987 . - 0 ID=cds-WP_016193205.1-3;Parent=gene-LU631_RS13500;Dbxref=Genbank:WP_016193205.1;Name=WP_016193205.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072471.1;locus_tag=LU631_RS13500;product=phage baseplate assembly protein V;protein_id=WP_016193205.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2531984 2532622 . - . ID=gene-LU631_RS13505;Name=LU631_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13505;old_locus_tag=LU631_13505 NZ_CP089940.1 Protein Homology CDS 2531984 2532622 . - 0 ID=cds-WP_016193206.1-3;Parent=gene-LU631_RS13505;Dbxref=Genbank:WP_016193206.1;Name=WP_016193206.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117895.1;locus_tag=LU631_RS13505;product=phage virion morphogenesis protein;protein_id=WP_016193206.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2532619 2533080 . - . ID=gene-LU631_RS13510;Name=LU631_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13510;old_locus_tag=LU631_13510 NZ_CP089940.1 Protein Homology CDS 2532619 2533080 . - 0 ID=cds-WP_016193207.1-3;Parent=gene-LU631_RS13510;Dbxref=Genbank:WP_016193207.1;Name=WP_016193207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019843881.1;locus_tag=LU631_RS13510;product=phage tail protein;protein_id=WP_016193207.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2533085 2533600 . - . ID=gene-LU631_RS13515;Name=LU631_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13515;old_locus_tag=LU631_13515 NZ_CP089940.1 Protein Homology CDS 2533085 2533600 . - 0 ID=cds-WP_016193208.1-3;Parent=gene-LU631_RS13515;Dbxref=Genbank:WP_016193208.1;Name=WP_016193208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246755.1;locus_tag=LU631_RS13515;product=DUF2514 family protein;protein_id=WP_016193208.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2533597 2534143 . - . ID=gene-LU631_RS13520;Name=LU631_RS13520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13520;old_locus_tag=LU631_13520;pseudo=true NZ_CP089940.1 Protein Homology CDS 2533597 2534143 . - 0 ID=cds-LU631_RS13520;Parent=gene-LU631_RS13520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193209.1;locus_tag=LU631_RS13520;product=lysozyme;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2534127 2534429 . - . ID=gene-LU631_RS13525;Name=LU631_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13525;old_locus_tag=LU631_13525 NZ_CP089940.1 Protein Homology CDS 2534127 2534429 . - 0 ID=cds-WP_016193210.1-3;Parent=gene-LU631_RS13525;Dbxref=Genbank:WP_016193210.1;Name=WP_016193210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003835852.1;locus_tag=LU631_RS13525;product=hypothetical protein;protein_id=WP_016193210.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2534420 2534620 . - . ID=gene-LU631_RS13530;Name=LU631_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13530;old_locus_tag=LU631_13530 NZ_CP089940.1 Protein Homology CDS 2534420 2534620 . - 0 ID=cds-WP_016193211.1-3;Parent=gene-LU631_RS13530;Dbxref=Genbank:WP_016193211.1;Name=WP_016193211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537159.1;locus_tag=LU631_RS13530;product=tail protein X;protein_id=WP_016193211.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2534620 2535144 . - . ID=gene-LU631_RS13535;Name=LU631_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13535;old_locus_tag=LU631_13535 NZ_CP089940.1 Protein Homology CDS 2534620 2535144 . - 0 ID=cds-WP_016193212.1-3;Parent=gene-LU631_RS13535;Dbxref=Genbank:WP_016193212.1;Name=WP_016193212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193212.1;locus_tag=LU631_RS13535;product=head completion/stabilization protein;protein_id=WP_016193212.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2535241 2536098 . - . ID=gene-LU631_RS13540;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=LU631_RS13540;old_locus_tag=LU631_13540 NZ_CP089940.1 Protein Homology CDS 2535241 2536098 . - 0 ID=cds-WP_040465938.1-3;Parent=gene-LU631_RS13540;Dbxref=Genbank:WP_040465938.1;Name=WP_040465938.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072479.1;locus_tag=LU631_RS13540;product=phage terminase small subunit;protein_id=WP_040465938.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2536123 2537172 . - . ID=gene-LU631_RS13545;Name=LU631_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13545;old_locus_tag=LU631_13545 NZ_CP089940.1 Protein Homology CDS 2536123 2537172 . - 0 ID=cds-WP_016193214.1-3;Parent=gene-LU631_RS13545;Dbxref=Genbank:WP_016193214.1;Name=WP_016193214.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193214.1;locus_tag=LU631_RS13545;product=phage major capsid protein%2C P2 family;protein_id=WP_016193214.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2537196 2538032 . - . ID=gene-LU631_RS13550;Name=LU631_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13550;old_locus_tag=LU631_13550 NZ_CP089940.1 Protein Homology CDS 2537196 2538032 . - 0 ID=cds-WP_016193215.1-3;Parent=gene-LU631_RS13550;Dbxref=Genbank:WP_016193215.1;Name=WP_016193215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500366.1;locus_tag=LU631_RS13550;product=GPO family capsid scaffolding protein;protein_id=WP_016193215.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2538192 2539922 . + . ID=gene-LU631_RS13555;Name=LU631_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13555;old_locus_tag=LU631_13555 NZ_CP089940.1 Protein Homology CDS 2538192 2539922 . + 0 ID=cds-WP_040465939.1-3;Parent=gene-LU631_RS13555;Dbxref=Genbank:WP_040465939.1;Name=WP_040465939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855478.1;locus_tag=LU631_RS13555;product=terminase family protein;protein_id=WP_040465939.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2539922 2540981 . + . ID=gene-LU631_RS13560;Name=LU631_RS13560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13560;old_locus_tag=LU631_13560;pseudo=true NZ_CP089940.1 Protein Homology CDS 2539922 2540981 . + 0 ID=cds-LU631_RS13560;Parent=gene-LU631_RS13560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072483.1;locus_tag=LU631_RS13560;product=phage portal protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2541052 2541555 . - . ID=gene-LU631_RS13565;Name=LU631_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13565;old_locus_tag=LU631_13565 NZ_CP089940.1 GeneMarkS-2+ CDS 2541052 2541555 . - 0 ID=cds-WP_016193219.1-3;Parent=gene-LU631_RS13565;Dbxref=Genbank:WP_016193219.1;Name=WP_016193219.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS13565;product=hypothetical protein;protein_id=WP_016193219.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2541965 2542348 . - . ID=gene-LU631_RS13570;Name=LU631_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13570;old_locus_tag=LU631_13570 NZ_CP089940.1 Protein Homology CDS 2541965 2542348 . - 0 ID=cds-WP_046371846.1-2;Parent=gene-LU631_RS13570;Dbxref=Genbank:WP_046371846.1;Name=WP_046371846.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117882.1;locus_tag=LU631_RS13570;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_046371846.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2542345 2542566 . - . ID=gene-LU631_RS13575;Name=LU631_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13575;old_locus_tag=LU631_13575 NZ_CP089940.1 Protein Homology CDS 2542345 2542566 . - 0 ID=cds-WP_006117881.1-2;Parent=gene-LU631_RS13575;Dbxref=Genbank:WP_006117881.1;Name=WP_006117881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016941532.1;locus_tag=LU631_RS13575;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_006117881.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2542633 2543328 . - . ID=gene-LU631_RS13580;Name=LU631_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13580;old_locus_tag=LU631_13580 NZ_CP089940.1 Protein Homology CDS 2542633 2543328 . - 0 ID=cds-WP_046371847.1-2;Parent=gene-LU631_RS13580;Dbxref=Genbank:WP_046371847.1;Name=WP_046371847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155224.1;locus_tag=LU631_RS13580;product=DNA methylase;protein_id=WP_046371847.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2543578 2543937 . - . ID=gene-LU631_RS13585;Name=LU631_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13585;old_locus_tag=LU631_13585 NZ_CP089940.1 Protein Homology CDS 2543578 2543937 . - 0 ID=cds-WP_046371849.1-3;Parent=gene-LU631_RS13585;Dbxref=Genbank:WP_046371849.1;Name=WP_046371849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181489.1;locus_tag=LU631_RS13585;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_046371849.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2543957 2544223 . - . ID=gene-LU631_RS13590;Name=LU631_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13590;old_locus_tag=LU631_13590 NZ_CP089940.1 GeneMarkS-2+ CDS 2543957 2544223 . - 0 ID=cds-WP_046371850.1-3;Parent=gene-LU631_RS13590;Dbxref=Genbank:WP_046371850.1;Name=WP_046371850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS13590;product=hypothetical protein;protein_id=WP_046371850.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2544189 2546708 . - . ID=gene-LU631_RS13595;Name=LU631_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13595;old_locus_tag=LU631_13595 NZ_CP089940.1 Protein Homology CDS 2544189 2546708 . - 0 ID=cds-WP_052734690.1-2;Parent=gene-LU631_RS13595;Dbxref=Genbank:WP_052734690.1;Name=WP_052734690.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015871545.1;locus_tag=LU631_RS13595;product=replication endonuclease;protein_id=WP_052734690.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2546708 2547091 . - . ID=gene-LU631_RS13600;Name=LU631_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13600;old_locus_tag=LU631_13600 NZ_CP089940.1 GeneMarkS-2+ CDS 2546708 2547091 . - 0 ID=cds-WP_016193222.1-3;Parent=gene-LU631_RS13600;Dbxref=Genbank:WP_016193222.1;Name=WP_016193222.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS13600;product=hypothetical protein;protein_id=WP_016193222.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2547164 2547406 . - . ID=gene-LU631_RS13605;Name=LU631_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13605;old_locus_tag=LU631_13605 NZ_CP089940.1 GeneMarkS-2+ CDS 2547164 2547406 . - 0 ID=cds-WP_016193223.1-3;Parent=gene-LU631_RS13605;Dbxref=Genbank:WP_016193223.1;Name=WP_016193223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS13605;product=hypothetical protein;protein_id=WP_016193223.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2547454 2547720 . - . ID=gene-LU631_RS13610;Name=LU631_RS13610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13610;old_locus_tag=LU631_13610;partial=true;pseudo=true;start_range=.,2547454 NZ_CP089940.1 Protein Homology CDS 2547454 2547720 . - 0 ID=cds-LU631_RS13610;Parent=gene-LU631_RS13610;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022029.2;locus_tag=LU631_RS13610;partial=true;product=ash family protein;pseudo=true;start_range=.,2547454;transl_table=11 NZ_CP089940.1 RefSeq gene 2547738 2547944 . - . ID=gene-LU631_RS13615;Name=LU631_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13615;old_locus_tag=LU631_13615 NZ_CP089940.1 GeneMarkS-2+ CDS 2547738 2547944 . - 0 ID=cds-WP_016193242.1-3;Parent=gene-LU631_RS13615;Dbxref=Genbank:WP_016193242.1;Name=WP_016193242.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS13615;product=hypothetical protein;protein_id=WP_016193242.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2547941 2548783 . - . ID=gene-LU631_RS13620;Name=LU631_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13620;old_locus_tag=LU631_13620 NZ_CP089940.1 Protein Homology CDS 2547941 2548783 . - 0 ID=cds-WP_016193243.1-3;Parent=gene-LU631_RS13620;Dbxref=Genbank:WP_016193243.1;Name=WP_016193243.1;Ontology_term=GO:0006306,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117877.1;locus_tag=LU631_RS13620;product=Dam family site-specific DNA-(adenine-N6)-methyltransferase;protein_id=WP_016193243.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2548780 2549352 . - . ID=gene-LU631_RS13625;Name=LU631_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13625;old_locus_tag=LU631_13625 NZ_CP089940.1 Protein Homology CDS 2548780 2549352 . - 0 ID=cds-WP_016193244.1-3;Parent=gene-LU631_RS13625;Dbxref=Genbank:WP_016193244.1;Name=WP_016193244.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027788.2;locus_tag=LU631_RS13625;product=3'-5' exonuclease;protein_id=WP_016193244.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2549422 2549814 . - . ID=gene-LU631_RS13630;Name=LU631_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13630;old_locus_tag=LU631_13630 NZ_CP089940.1 Protein Homology CDS 2549422 2549814 . - 0 ID=cds-WP_040465952.1-3;Parent=gene-LU631_RS13630;Dbxref=Genbank:WP_040465952.1;Name=WP_040465952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001514713.1;locus_tag=LU631_RS13630;product=hypothetical protein;protein_id=WP_040465952.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2549984 2550220 . - . ID=gene-LU631_RS13635;Name=LU631_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13635;old_locus_tag=LU631_13635 NZ_CP089940.1 GeneMarkS-2+ CDS 2549984 2550220 . - 0 ID=cds-WP_040465953.1-3;Parent=gene-LU631_RS13635;Dbxref=Genbank:WP_040465953.1;Name=WP_040465953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS13635;product=hypothetical protein;protein_id=WP_040465953.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2550558 2550797 . - . ID=gene-LU631_RS13640;Name=LU631_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13640;old_locus_tag=LU631_13640 NZ_CP089940.1 Protein Homology CDS 2550558 2550797 . - 0 ID=cds-WP_016193245.1-3;Parent=gene-LU631_RS13640;Dbxref=Genbank:WP_016193245.1;Name=WP_016193245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201494.1;locus_tag=LU631_RS13640;product=hypothetical protein;protein_id=WP_016193245.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2550766 2550948 . - . ID=gene-LU631_RS13645;Name=LU631_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13645;old_locus_tag=LU631_13645 NZ_CP089940.1 GeneMarkS-2+ CDS 2550766 2550948 . - 0 ID=cds-WP_046371852.1-3;Parent=gene-LU631_RS13645;Dbxref=Genbank:WP_046371852.1;Name=WP_046371852.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS13645;product=hypothetical protein;protein_id=WP_046371852.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2550926 2551183 . - . ID=gene-LU631_RS13650;Name=LU631_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13650;old_locus_tag=LU631_13650 NZ_CP089940.1 Protein Homology CDS 2550926 2551183 . - 0 ID=cds-WP_016193247.1-3;Parent=gene-LU631_RS13650;Dbxref=Genbank:WP_016193247.1;Name=WP_016193247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003835823.1;locus_tag=LU631_RS13650;product=hypothetical protein;protein_id=WP_016193247.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2551180 2551611 . - . ID=gene-LU631_RS13655;Name=LU631_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13655;old_locus_tag=LU631_13655 NZ_CP089940.1 GeneMarkS-2+ CDS 2551180 2551611 . - 0 ID=cds-WP_233481908.1-3;Parent=gene-LU631_RS13655;Dbxref=Genbank:WP_233481908.1;Name=WP_233481908.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS13655;product=hypothetical protein;protein_id=WP_233481908.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2551716 2551997 . + . ID=gene-LU631_RS13660;Name=LU631_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13660;old_locus_tag=LU631_13660 NZ_CP089940.1 Protein Homology CDS 2551716 2551997 . + 0 ID=cds-WP_046371853.1-2;Parent=gene-LU631_RS13660;Dbxref=Genbank:WP_046371853.1;Name=WP_046371853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536686.1;locus_tag=LU631_RS13660;product=helix-turn-helix transcriptional regulator;protein_id=WP_046371853.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2552082 2553101 . + . ID=gene-LU631_RS13665;Name=LU631_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13665;old_locus_tag=LU631_13665 NZ_CP089940.1 Protein Homology CDS 2552082 2553101 . + 0 ID=cds-WP_046371854.1-2;Parent=gene-LU631_RS13665;Dbxref=Genbank:WP_046371854.1;Name=WP_046371854.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017371518.1;locus_tag=LU631_RS13665;product=tyrosine-type recombinase/integrase;protein_id=WP_046371854.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2553167 2553587 . - . ID=gene-LU631_RS13670;Name=LU631_RS13670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13670;old_locus_tag=LU631_13670;partial=true;pseudo=true;start_range=.,2553167 NZ_CP089940.1 Protein Homology CDS 2553167 2553587 . - 0 ID=cds-LU631_RS13670;Parent=gene-LU631_RS13670;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,CoA pyrophosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441973.1;locus_tag=LU631_RS13670;partial=true;product=CoA pyrophosphatase;pseudo=true;start_range=.,2553167;transl_table=11 NZ_CP089940.1 RefSeq gene 2553580 2554944 . - . ID=gene-LU631_RS13675;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=LU631_RS13675;old_locus_tag=LU631_13675 NZ_CP089940.1 Protein Homology CDS 2553580 2554944 . - 0 ID=cds-WP_016192447.1;Parent=gene-LU631_RS13675;Dbxref=Genbank:WP_016192447.1;Name=WP_016192447.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441266.1;locus_tag=LU631_RS13675;product=aminodeoxychorismate synthase component 1;protein_id=WP_016192447.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2555056 2555241 . + . ID=gene-LU631_RS13680;Name=LU631_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13680;old_locus_tag=LU631_13680 NZ_CP089940.1 Protein Homology CDS 2555056 2555241 . + 0 ID=cds-WP_016192448.1;Parent=gene-LU631_RS13680;Dbxref=Genbank:WP_016192448.1;Name=WP_016192448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366046.1;locus_tag=LU631_RS13680;product=YoaH family protein;protein_id=WP_016192448.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2555279 2555482 . + . ID=gene-LU631_RS13685;Name=LU631_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13685;old_locus_tag=LU631_13685 NZ_CP089940.1 GeneMarkS-2+ CDS 2555279 2555482 . + 0 ID=cds-WP_152664151.1;Parent=gene-LU631_RS13685;Dbxref=Genbank:WP_152664151.1;Name=WP_152664151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS13685;product=hypothetical protein;protein_id=WP_152664151.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2555605 2556249 . + . ID=gene-LU631_RS13690;Name=LU631_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13690;old_locus_tag=LU631_13690 NZ_CP089940.1 GeneMarkS-2+ CDS 2555605 2556249 . + 0 ID=cds-WP_016192450.1;Parent=gene-LU631_RS13690;Dbxref=Genbank:WP_016192450.1;Name=WP_016192450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS13690;product=hypothetical protein;protein_id=WP_016192450.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2556259 2556603 . - . ID=gene-LU631_RS13695;Name=LU631_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13695;old_locus_tag=LU631_13695 NZ_CP089940.1 Protein Homology CDS 2556259 2556603 . - 0 ID=cds-WP_016192451.1;Parent=gene-LU631_RS13695;Dbxref=Genbank:WP_016192451.1;Name=WP_016192451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009089831.1;locus_tag=LU631_RS13695;product=RidA family protein;protein_id=WP_016192451.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2556887 2558797 . + . ID=gene-LU631_RS13700;Name=LU631_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13700;old_locus_tag=LU631_13700 NZ_CP089940.1 Protein Homology CDS 2556887 2558797 . + 0 ID=cds-WP_016192452.1;Parent=gene-LU631_RS13700;Dbxref=Genbank:WP_016192452.1;Name=WP_016192452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169977.1;locus_tag=LU631_RS13700;product=ATP-dependent DNA helicase;protein_id=WP_016192452.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2558858 2559556 . + . ID=gene-LU631_RS13705;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=LU631_RS13705;old_locus_tag=LU631_13705 NZ_CP089940.1 Protein Homology CDS 2558858 2559556 . + 0 ID=cds-WP_016192453.1;Parent=gene-LU631_RS13705;Dbxref=Genbank:WP_016192453.1;Name=WP_016192453.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016161378.1;locus_tag=LU631_RS13705;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_016192453.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2559671 2560267 . + . ID=gene-LU631_RS13710;Name=LU631_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13710;old_locus_tag=LU631_13710 NZ_CP089940.1 Protein Homology CDS 2559671 2560267 . + 0 ID=cds-WP_016192454.1;Parent=gene-LU631_RS13710;Dbxref=Genbank:WP_016192454.1;Name=WP_016192454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202464.1;locus_tag=LU631_RS13710;product=Slp family lipoprotein;protein_id=WP_016192454.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2560481 2562193 . + . ID=gene-LU631_RS13715;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=pseudogene;locus_tag=LU631_RS13715;old_locus_tag=LU631_13715;pseudo=true NZ_CP089940.1 Protein Homology CDS 2560481 2562193 . + 0 ID=cds-LU631_RS13715;Parent=gene-LU631_RS13715;Note=frameshifted;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083204.1;locus_tag=LU631_RS13715;product=long-chain-fatty-acid--CoA ligase FadD;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2562292 2563410 . + . ID=gene-LU631_RS13720;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=LU631_RS13720;old_locus_tag=LU631_13720 NZ_CP089940.1 Protein Homology CDS 2562292 2563410 . + 0 ID=cds-WP_016192455.1;Parent=gene-LU631_RS13720;Dbxref=Genbank:WP_016192455.1;Name=WP_016192455.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020454072.1;locus_tag=LU631_RS13720;product=ribonuclease D;protein_id=WP_016192455.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2563462 2563731 . - . ID=gene-LU631_RS13725;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=LU631_RS13725;old_locus_tag=LU631_13725 NZ_CP089940.1 Protein Homology CDS 2563462 2563731 . - 0 ID=cds-WP_016192456.1;Parent=gene-LU631_RS13725;Dbxref=Genbank:WP_016192456.1;Name=WP_016192456.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015840174.1;locus_tag=LU631_RS13725;product=cell division topological specificity factor MinE;protein_id=WP_016192456.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2563735 2564547 . - . ID=gene-LU631_RS13730;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=LU631_RS13730;old_locus_tag=LU631_13730 NZ_CP089940.1 Protein Homology CDS 2563735 2564547 . - 0 ID=cds-WP_016192457.1;Parent=gene-LU631_RS13730;Dbxref=Genbank:WP_016192457.1;Name=WP_016192457.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=LU631_RS13730;product=septum site-determining protein MinD;protein_id=WP_016192457.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2564587 2565279 . - . ID=gene-LU631_RS13735;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=LU631_RS13735;old_locus_tag=LU631_13735 NZ_CP089940.1 Protein Homology CDS 2564587 2565279 . - 0 ID=cds-WP_016192458.1;Parent=gene-LU631_RS13735;Dbxref=Genbank:WP_016192458.1;Name=WP_016192458.1;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544415.1;locus_tag=LU631_RS13735;product=septum site-determining protein MinC;protein_id=WP_016192458.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2565437 2565712 . + . ID=gene-LU631_RS13740;Name=LU631_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13740;old_locus_tag=LU631_13740 NZ_CP089940.1 Protein Homology CDS 2565437 2565712 . + 0 ID=cds-WP_016192459.1;Parent=gene-LU631_RS13740;Dbxref=Genbank:WP_016192459.1;Name=WP_016192459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964089.1;locus_tag=LU631_RS13740;product=YcgL domain-containing protein;protein_id=WP_016192459.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2565961 2566620 . + . ID=gene-LU631_RS13745;Name=LU631_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13745;old_locus_tag=LU631_13745 NZ_CP089940.1 Protein Homology CDS 2565961 2566620 . + 0 ID=cds-WP_016192460.1;Parent=gene-LU631_RS13745;Dbxref=Genbank:WP_016192460.1;Name=WP_016192460.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309702.1;locus_tag=LU631_RS13745;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_016192460.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2566684 2567127 . + . ID=gene-LU631_RS13750;Name=LU631_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13750;old_locus_tag=LU631_13750 NZ_CP089940.1 Protein Homology CDS 2566684 2567127 . + 0 ID=cds-WP_016192461.1;Parent=gene-LU631_RS13750;Dbxref=Genbank:WP_016192461.1;Name=WP_016192461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202455.1;locus_tag=LU631_RS13750;product=YcgN family cysteine cluster protein;protein_id=WP_016192461.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2567392 2567895 . - . ID=gene-LU631_RS13755;Name=LU631_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13755;old_locus_tag=LU631_13755 NZ_CP089940.1 Protein Homology CDS 2567392 2567895 . - 0 ID=cds-WP_046371855.1;Parent=gene-LU631_RS13755;Dbxref=Genbank:WP_046371855.1;Name=WP_046371855.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU631_RS13755;product=IS1 family transposase;protein_id=WP_046371855.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2567814 2568089 . - . ID=gene-LU631_RS13760;Name=LU631_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13760;old_locus_tag=LU631_13760 NZ_CP089940.1 Protein Homology CDS 2567814 2568089 . - 0 ID=cds-WP_072052792.1;Parent=gene-LU631_RS13760;Dbxref=Genbank:WP_072052792.1;Name=WP_072052792.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU631_RS13760;product=IS1-like element transposase;protein_id=WP_072052792.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2568167 2568862 . - . ID=gene-LU631_RS13765;Name=LU631_RS13765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13765;old_locus_tag=LU631_13765;partial=true;pseudo=true;start_range=.,2568167 NZ_CP089940.1 Protein Homology CDS 2568167 2568862 . - 0 ID=cds-LU631_RS13765;Parent=gene-LU631_RS13765;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS13765;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,2568167;transl_table=11 NZ_CP089940.1 RefSeq gene 2569594 2570124 . - . ID=gene-LU631_RS13770;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=LU631_RS13770;old_locus_tag=LU631_13770 NZ_CP089940.1 Protein Homology CDS 2569594 2570124 . - 0 ID=cds-WP_016192465.1;Parent=gene-LU631_RS13770;Dbxref=Genbank:WP_016192465.1;Name=WP_016192465.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078485.1;locus_tag=LU631_RS13770;product=disulfide bond formation protein DsbB;protein_id=WP_016192465.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2570430 2571140 . + . ID=gene-LU631_RS13775;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=LU631_RS13775;old_locus_tag=LU631_13775 NZ_CP089940.1 Protein Homology CDS 2570430 2571140 . + 0 ID=cds-WP_016192466.1;Parent=gene-LU631_RS13775;Dbxref=Genbank:WP_016192466.1;Name=WP_016192466.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010260584.1;locus_tag=LU631_RS13775;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_016192466.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2571193 2572728 . - . ID=gene-LU631_RS13780;Name=LU631_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13780;old_locus_tag=LU631_13780 NZ_CP089940.1 Protein Homology CDS 2571193 2572728 . - 0 ID=cds-WP_016192467.1;Parent=gene-LU631_RS13780;Dbxref=Genbank:WP_016192467.1;Name=WP_016192467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010260586.1;locus_tag=LU631_RS13780;product=SpoVR family protein;protein_id=WP_016192467.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2573231 2574526 . + . ID=gene-LU631_RS13785;Name=LU631_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13785;old_locus_tag=LU631_13785 NZ_CP089940.1 Protein Homology CDS 2573231 2574526 . + 0 ID=cds-WP_046371856.1;Parent=gene-LU631_RS13785;Dbxref=Genbank:WP_046371856.1;Name=WP_046371856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008110371.1;locus_tag=LU631_RS13785;product=D-amino acid dehydrogenase;protein_id=WP_046371856.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2574554 2575624 . + . ID=gene-LU631_RS13790;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=LU631_RS13790;old_locus_tag=LU631_13790 NZ_CP089940.1 Protein Homology CDS 2574554 2575624 . + 0 ID=cds-WP_016192469.1;Parent=gene-LU631_RS13790;Dbxref=Genbank:WP_016192469.1;Name=WP_016192469.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544407.1;locus_tag=LU631_RS13790;product=catabolic alanine racemase DadX;protein_id=WP_016192469.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2575778 2576230 . + . ID=gene-LU631_RS13795;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS13795;old_locus_tag=LU631_13795 NZ_CP089940.1 Protein Homology CDS 2575778 2576230 . + 0 ID=cds-WP_016192470.1;Parent=gene-LU631_RS13795;Dbxref=Genbank:WP_016192470.1;Name=WP_016192470.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011758714.1;locus_tag=LU631_RS13795;product=IS200/IS605 family transposase;protein_id=WP_016192470.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2576265 2577440 . - . ID=gene-LU631_RS13800;Name=LU631_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13800;old_locus_tag=LU631_13800 NZ_CP089940.1 Protein Homology CDS 2576265 2577440 . - 0 ID=cds-WP_016192471.1;Parent=gene-LU631_RS13800;Dbxref=Genbank:WP_016192471.1;Name=WP_016192471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852734.1;locus_tag=LU631_RS13800;product=multidrug effflux MFS transporter;protein_id=WP_016192471.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2577569 2577775 . - . ID=gene-LU631_RS13805;Name=LU631_RS13805;end_range=2577775,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13805;old_locus_tag=LU631_13805;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2577569 2577775 . - 0 ID=cds-LU631_RS13805;Parent=gene-LU631_RS13805;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2577775,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105124.1;locus_tag=LU631_RS13805;partial=true;product=sugar transferase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2577952 2579150 . - . ID=gene-LU631_RS13810;Name=LU631_RS13810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13810;old_locus_tag=LU631_13810;pseudo=true NZ_CP089940.1 Protein Homology CDS 2577952 2579150 . - 0 ID=cds-LU631_RS13810;Parent=gene-LU631_RS13810;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU631_RS13810;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2579306 2579494 . - . ID=gene-LU631_RS13815;Name=LU631_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13815;old_locus_tag=LU631_13815 NZ_CP089940.1 GeneMarkS-2+ CDS 2579306 2579494 . - 0 ID=cds-WP_016192476.1;Parent=gene-LU631_RS13815;Dbxref=Genbank:WP_016192476.1;Name=WP_016192476.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS13815;product=hypothetical protein;protein_id=WP_016192476.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2579635 2581362 . - . ID=gene-LU631_RS13820;Name=LU631_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13820;old_locus_tag=LU631_13820 NZ_CP089940.1 Protein Homology CDS 2579635 2581362 . - 0 ID=cds-WP_016192477.1;Parent=gene-LU631_RS13820;Dbxref=Genbank:WP_016192477.1;Name=WP_016192477.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0005451,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105126.1;locus_tag=LU631_RS13820;product=potassium/proton antiporter;protein_id=WP_016192477.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2581812 2582369 . + . ID=gene-LU631_RS13825;Name=LU631_RS13825;end_range=2582369,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13825;old_locus_tag=LU631_13825;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2581812 2582369 . + 0 ID=cds-LU631_RS13825;Parent=gene-LU631_RS13825;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2582369,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS13825;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2582351 2582785 . - . ID=gene-LU631_RS13830;Name=LU631_RS13830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13830;old_locus_tag=LU631_13830;partial=true;pseudo=true;start_range=.,2582351 NZ_CP089940.1 Protein Homology CDS 2582351 2582785 . - 0 ID=cds-LU631_RS13830;Parent=gene-LU631_RS13830;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS13830;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,2582351;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2582886 2583179 . + . ID=gene-LU631_RS13835;Name=LU631_RS13835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13835;old_locus_tag=LU631_13835;partial=true;pseudo=true;start_range=.,2582886 NZ_CP089940.1 Protein Homology CDS 2582886 2583179 . + 0 ID=cds-LU631_RS13835;Parent=gene-LU631_RS13835;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS13835;partial=true;product=transposase;pseudo=true;start_range=.,2582886;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2583265 2583681 . - . ID=gene-LU631_RS13840;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS13840;old_locus_tag=LU631_13840;pseudo=true NZ_CP089940.1 Protein Homology CDS 2583265 2583681 . - 0 ID=cds-LU631_RS13840;Parent=gene-LU631_RS13840;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190995.1;locus_tag=LU631_RS13840;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2583834 2585105 . - . ID=gene-LU631_RS13845;Name=LU631_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13845;old_locus_tag=LU631_13845 NZ_CP089940.1 Protein Homology CDS 2583834 2585105 . - 0 ID=cds-WP_016192479.1;Parent=gene-LU631_RS13845;Dbxref=Genbank:WP_016192479.1;Name=WP_016192479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006119424.1;locus_tag=LU631_RS13845;product=YeaH/YhbH family protein;protein_id=WP_016192479.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2585177 2587111 . - . ID=gene-LU631_RS13850;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=LU631_RS13850;old_locus_tag=LU631_13850 NZ_CP089940.1 Protein Homology CDS 2585177 2587111 . - 0 ID=cds-WP_016192480.1;Parent=gene-LU631_RS13850;Dbxref=Genbank:WP_016192480.1;Name=WP_016192480.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460251.1;locus_tag=LU631_RS13850;product=protein kinase YeaG;protein_id=WP_016192480.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2587825 2588525 . - . ID=gene-LU631_RS13855;Name=LU631_RS13855;end_range=2588525,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS13855;old_locus_tag=LU631_13855;partial=true;pseudo=true;start_range=.,2587825 NZ_CP089940.1 Protein Homology CDS 2587825 2588525 . - 0 ID=cds-LU631_RS13855;Parent=gene-LU631_RS13855;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2588525,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612066.1;locus_tag=LU631_RS13855;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,2587825;transl_table=11 NZ_CP089940.1 RefSeq gene 2588737 2589615 . - . ID=gene-LU631_RS13860;Name=LU631_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13860;old_locus_tag=LU631_13860 NZ_CP089940.1 Protein Homology CDS 2588737 2589615 . - 0 ID=cds-WP_016192483.1;Parent=gene-LU631_RS13860;Dbxref=Genbank:WP_016192483.1;Name=WP_016192483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202440.1;locus_tag=LU631_RS13860;product=D-hexose-6-phosphate mutarotase;protein_id=WP_016192483.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2590023 2591018 . - . ID=gene-LU631_RS13865;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=LU631_RS13865;old_locus_tag=LU631_13865 NZ_CP089940.1 Protein Homology CDS 2590023 2591018 . - 0 ID=cds-WP_016192484.1;Parent=gene-LU631_RS13865;Dbxref=Genbank:WP_016192484.1;Name=WP_016192484.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226380.1;locus_tag=LU631_RS13865;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_016192484.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2591360 2591770 . + . ID=gene-LU631_RS13870;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=LU631_RS13870;old_locus_tag=LU631_13870 NZ_CP089940.1 Protein Homology CDS 2591360 2591770 . + 0 ID=cds-WP_016192485.1;Parent=gene-LU631_RS13870;Dbxref=Genbank:WP_016192485.1;Name=WP_016192485.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202438.1;locus_tag=LU631_RS13870;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_016192485.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2591776 2592054 . + . ID=gene-LU631_RS13875;Name=LU631_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13875;old_locus_tag=LU631_13875 NZ_CP089940.1 Protein Homology CDS 2591776 2592054 . + 0 ID=cds-WP_016192486.1;Parent=gene-LU631_RS13875;Dbxref=Genbank:WP_016192486.1;Name=WP_016192486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667943.1;locus_tag=LU631_RS13875;product=DUF1315 family protein;protein_id=WP_016192486.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2592055 2592675 . - . ID=gene-LU631_RS13880;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=LU631_RS13880;old_locus_tag=LU631_13880 NZ_CP089940.1 Protein Homology CDS 2592055 2592675 . - 0 ID=cds-WP_016192487.1;Parent=gene-LU631_RS13880;Dbxref=Genbank:WP_016192487.1;Name=WP_016192487.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157812.1;locus_tag=LU631_RS13880;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_016192487.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2592687 2593703 . - . ID=gene-LU631_RS13885;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=LU631_RS13885;old_locus_tag=LU631_13885 NZ_CP089940.1 Protein Homology CDS 2592687 2593703 . - 0 ID=cds-WP_016192488.1;Parent=gene-LU631_RS13885;Dbxref=Genbank:WP_016192488.1;Name=WP_016192488.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310501.1;locus_tag=LU631_RS13885;product=asparaginase;protein_id=WP_016192488.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2593772 2595628 . - . ID=gene-LU631_RS13890;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=LU631_RS13890;old_locus_tag=LU631_13890 NZ_CP089940.1 Protein Homology CDS 2593772 2595628 . - 0 ID=cds-WP_016192489.1;Parent=gene-LU631_RS13890;Dbxref=Genbank:WP_016192489.1;Name=WP_016192489.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169948.1;locus_tag=LU631_RS13890;product=signal peptide peptidase SppA;protein_id=WP_016192489.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2595808 2596359 . + . ID=gene-LU631_RS13895;Name=LU631_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13895;old_locus_tag=LU631_13895 NZ_CP089940.1 Protein Homology CDS 2595808 2596359 . + 0 ID=cds-WP_016192490.1;Parent=gene-LU631_RS13895;Dbxref=Genbank:WP_016192490.1;Name=WP_016192490.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358057.1;locus_tag=LU631_RS13895;product=NAD(P)H nitroreductase;protein_id=WP_016192490.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2596630 2598540 . + . ID=gene-LU631_RS13900;Name=LU631_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13900;old_locus_tag=LU631_13900 NZ_CP089940.1 Protein Homology CDS 2596630 2598540 . + 0 ID=cds-WP_016192491.1;Parent=gene-LU631_RS13900;Dbxref=Genbank:WP_016192491.1;Name=WP_016192491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009089894.1;locus_tag=LU631_RS13900;product=DNA topoisomerase III;protein_id=WP_016192491.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2598543 2598881 . + . ID=gene-LU631_RS13905;Name=LU631_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13905;old_locus_tag=LU631_13905 NZ_CP089940.1 Protein Homology CDS 2598543 2598881 . + 0 ID=cds-WP_040465807.1;Parent=gene-LU631_RS13905;Dbxref=Genbank:WP_040465807.1;Name=WP_040465807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010618765.1;locus_tag=LU631_RS13905;product=DUF1496 domain-containing protein;protein_id=WP_040465807.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2598916 2599722 . - . ID=gene-LU631_RS13910;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=LU631_RS13910;old_locus_tag=LU631_13910 NZ_CP089940.1 Protein Homology CDS 2598916 2599722 . - 0 ID=cds-WP_016192493.1;Parent=gene-LU631_RS13910;Dbxref=Genbank:WP_016192493.1;Name=WP_016192493.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008853;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884424.1;locus_tag=LU631_RS13910;product=exodeoxyribonuclease III;protein_id=WP_016192493.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2599996 2600077 . - . ID=gene-LU631_RS13915;Name=LU631_RS13915;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS13915;old_locus_tag=LU631_13915 NZ_CP089940.1 tRNAscan-SE tRNA 2599996 2600077 . - . ID=rna-LU631_RS13915;Parent=gene-LU631_RS13915;anticodon=(pos:complement(2600041..2600043));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS13915;product=tRNA-Tyr NZ_CP089940.1 tRNAscan-SE exon 2599996 2600077 . - . ID=exon-LU631_RS13915-1;Parent=rna-LU631_RS13915;anticodon=(pos:complement(2600041..2600043));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS13915;product=tRNA-Tyr NZ_CP089940.1 RefSeq gene 2600249 2601097 . - . ID=gene-LU631_RS13920;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=LU631_RS13920;old_locus_tag=LU631_13920 NZ_CP089940.1 Protein Homology CDS 2600249 2601097 . - 0 ID=cds-WP_016192494.1;Parent=gene-LU631_RS13920;Dbxref=Genbank:WP_016192494.1;Name=WP_016192494.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852258.1;locus_tag=LU631_RS13920;product=formyltetrahydrofolate deformylase;protein_id=WP_016192494.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2601144 2601602 . - . ID=gene-LU631_RS13925;Name=LU631_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13925;old_locus_tag=LU631_13925 NZ_CP089940.1 Protein Homology CDS 2601144 2601602 . - 0 ID=cds-WP_016192495.1;Parent=gene-LU631_RS13925;Dbxref=Genbank:WP_016192495.1;Name=WP_016192495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005968732.1;locus_tag=LU631_RS13925;product=YchJ family protein;protein_id=WP_016192495.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2601707 2602586 . + . ID=gene-LU631_RS13930;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=pseudogene;locus_tag=LU631_RS13930;old_locus_tag=LU631_13930;pseudo=true NZ_CP089940.1 Protein Homology CDS 2601707 2602586 . + 0 ID=cds-LU631_RS13930;Parent=gene-LU631_RS13930;Note=frameshifted%3B internal stop;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001230572.1;locus_tag=LU631_RS13930;product=patatin-like phospholipase RssA;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2602690 2603703 . + . ID=gene-LU631_RS13935;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=LU631_RS13935;old_locus_tag=LU631_13935 NZ_CP089940.1 Protein Homology CDS 2602690 2603703 . + 0 ID=cds-WP_016192499.1;Parent=gene-LU631_RS13935;Dbxref=Genbank:WP_016192499.1;Name=WP_016192499.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202425.1;locus_tag=LU631_RS13935;product=two-component system response regulator RssB;protein_id=WP_016192499.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2603898 2604806 . + . ID=gene-LU631_RS13940;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=LU631_RS13940;old_locus_tag=LU631_13940 NZ_CP089940.1 Protein Homology CDS 2603898 2604806 . + 0 ID=cds-WP_016192500.1;Parent=gene-LU631_RS13940;Dbxref=Genbank:WP_016192500.1;Name=WP_016192500.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309765.1;locus_tag=LU631_RS13940;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_016192500.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2604834 2606174 . + . ID=gene-LU631_RS13945;Name=LU631_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13945;old_locus_tag=LU631_13945 NZ_CP089940.1 Protein Homology CDS 2604834 2606174 . + 0 ID=cds-WP_016192501.1;Parent=gene-LU631_RS13945;Dbxref=Genbank:WP_016192501.1;Name=WP_016192501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157796.1;locus_tag=LU631_RS13945;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=WP_016192501.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2606189 2607196 . + . ID=gene-LU631_RS13950;Name=LU631_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13950;old_locus_tag=LU631_13950 NZ_CP089940.1 Protein Homology CDS 2606189 2607196 . + 0 ID=cds-WP_016192502.1;Parent=gene-LU631_RS13950;Dbxref=Genbank:WP_016192502.1;Name=WP_016192502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202422.1;locus_tag=LU631_RS13950;product=NAD-dependent epimerase;protein_id=WP_016192502.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2607250 2607654 . - . ID=gene-LU631_RS13955;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=LU631_RS13955;old_locus_tag=LU631_13955 NZ_CP089940.1 Protein Homology CDS 2607250 2607654 . - 0 ID=cds-WP_016192503.1;Parent=gene-LU631_RS13955;Dbxref=Genbank:WP_016192503.1;Name=WP_016192503.1;gbkey=CDS;gene=hns;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227498.1;locus_tag=LU631_RS13955;product=DNA-binding transcriptional regulator H-NS;protein_id=WP_016192503.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2608162 2608779 . + . ID=gene-LU631_RS13960;Name=LU631_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13960;old_locus_tag=LU631_13960 NZ_CP089940.1 Protein Homology CDS 2608162 2608779 . + 0 ID=cds-WP_016192504.1;Parent=gene-LU631_RS13960;Dbxref=Genbank:WP_016192504.1;Name=WP_016192504.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202420.1;locus_tag=LU631_RS13960;product=thymidine kinase;protein_id=WP_016192504.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2608930 2611608 . - . ID=gene-LU631_RS13965;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=LU631_RS13965;old_locus_tag=LU631_13965 NZ_CP089940.1 Protein Homology CDS 2608930 2611608 . - 0 ID=cds-WP_016192505.1;Parent=gene-LU631_RS13965;Dbxref=Genbank:WP_016192505.1;Name=WP_016192505.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010244364.1;locus_tag=LU631_RS13965;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_016192505.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2612072 2612719 . + . ID=gene-LU631_RS13970;Name=LU631_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13970;old_locus_tag=LU631_13970 NZ_CP089940.1 Protein Homology CDS 2612072 2612719 . + 0 ID=cds-WP_016192506.1;Parent=gene-LU631_RS13970;Dbxref=Genbank:WP_016192506.1;Name=WP_016192506.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025965.1;locus_tag=LU631_RS13970;product=YchE family NAAT transporter;protein_id=WP_016192506.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2613351 2614973 . + . ID=gene-LU631_RS13975;Name=LU631_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13975;old_locus_tag=LU631_13975 NZ_CP089940.1 Protein Homology CDS 2613351 2614973 . + 0 ID=cds-WP_016192507.1;Parent=gene-LU631_RS13975;Dbxref=Genbank:WP_016192507.1;Name=WP_016192507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010244372.1;locus_tag=LU631_RS13975;product=ABC transporter substrate-binding protein;protein_id=WP_016192507.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2615142 2616773 . + . ID=gene-LU631_RS13980;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=LU631_RS13980;old_locus_tag=LU631_13980 NZ_CP089940.1 Protein Homology CDS 2615142 2616773 . + 0 ID=cds-WP_016192508.1;Parent=gene-LU631_RS13980;Dbxref=Genbank:WP_016192508.1;Name=WP_016192508.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675662.1;locus_tag=LU631_RS13980;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_016192508.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2616854 2617774 . + . ID=gene-LU631_RS13985;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=LU631_RS13985;old_locus_tag=LU631_13985 NZ_CP089940.1 Protein Homology CDS 2616854 2617774 . + 0 ID=cds-WP_016192509.1;Parent=gene-LU631_RS13985;Dbxref=Genbank:WP_016192509.1;Name=WP_016192509.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=LU631_RS13985;product=oligopeptide ABC transporter permease OppB;protein_id=WP_016192509.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2617788 2618696 . + . ID=gene-LU631_RS13990;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=LU631_RS13990;old_locus_tag=LU631_13990 NZ_CP089940.1 Protein Homology CDS 2617788 2618696 . + 0 ID=cds-WP_016192510.1;Parent=gene-LU631_RS13990;Dbxref=Genbank:WP_016192510.1;Name=WP_016192510.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=LU631_RS13990;product=oligopeptide ABC transporter permease OppC;protein_id=WP_016192510.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2618707 2619720 . + . ID=gene-LU631_RS13995;Name=LU631_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS13995;old_locus_tag=LU631_13995 NZ_CP089940.1 Protein Homology CDS 2618707 2619720 . + 0 ID=cds-WP_016192511.1;Parent=gene-LU631_RS13995;Dbxref=Genbank:WP_016192511.1;Name=WP_016192511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544383.1;locus_tag=LU631_RS13995;product=ABC transporter ATP-binding protein;protein_id=WP_016192511.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2619717 2620718 . + . ID=gene-LU631_RS14000;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=LU631_RS14000;old_locus_tag=LU631_14000 NZ_CP089940.1 Protein Homology CDS 2619717 2620718 . + 0 ID=cds-WP_016192512.1;Parent=gene-LU631_RS14000;Dbxref=Genbank:WP_016192512.1;Name=WP_016192512.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;gene=oppF;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227487.1;locus_tag=LU631_RS14000;product=murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF;protein_id=WP_016192512.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2620946 2621269 . - . ID=gene-LU631_RS14005;Name=LU631_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14005;old_locus_tag=LU631_14005 NZ_CP089940.1 Protein Homology CDS 2620946 2621269 . - 0 ID=cds-WP_016192513.1;Parent=gene-LU631_RS14005;Dbxref=Genbank:WP_016192513.1;Name=WP_016192513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210649.1;locus_tag=LU631_RS14005;product=HI1450 family dsDNA-mimic protein;protein_id=WP_016192513.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2621315 2622775 . - . ID=gene-LU631_RS14010;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=LU631_RS14010;old_locus_tag=LU631_14010 NZ_CP089940.1 Protein Homology CDS 2621315 2622775 . - 0 ID=cds-WP_016192514.1;Parent=gene-LU631_RS14010;Dbxref=Genbank:WP_016192514.1;Name=WP_016192514.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=LU631_RS14010;product=cardiolipin synthase;protein_id=WP_016192514.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2623333 2624541 . - . ID=gene-LU631_RS14015;Name=LU631_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14015;old_locus_tag=LU631_14015 NZ_CP089940.1 Protein Homology CDS 2623333 2624541 . - 0 ID=cds-WP_046371858.1;Parent=gene-LU631_RS14015;Dbxref=Genbank:WP_046371858.1;Name=WP_046371858.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS14015;product=IS256 family transposase;protein_id=WP_046371858.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2624646 2625929 . - . ID=gene-LU631_RS14020;Name=LU631_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14020;old_locus_tag=LU631_14020 NZ_CP089940.1 Protein Homology CDS 2624646 2625929 . - 0 ID=cds-WP_040465794.1;Parent=gene-LU631_RS14020;Dbxref=Genbank:WP_040465794.1;Name=WP_040465794.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016903.2;locus_tag=LU631_RS14020;product=hypothetical protein;protein_id=WP_040465794.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2626198 2626494 . - . ID=gene-LU631_RS14025;Name=LU631_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14025;old_locus_tag=LU631_14025 NZ_CP089940.1 Protein Homology CDS 2626198 2626494 . - 0 ID=cds-WP_016192516.1;Parent=gene-LU631_RS14025;Dbxref=Genbank:WP_016192516.1;Name=WP_016192516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009448315.1;locus_tag=LU631_RS14025;product=YciI family protein;protein_id=WP_016192516.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2626699 2627427 . + . ID=gene-LU631_RS14030;Name=LU631_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14030;old_locus_tag=LU631_14030 NZ_CP089940.1 Protein Homology CDS 2626699 2627427 . + 0 ID=cds-WP_016192517.1;Parent=gene-LU631_RS14030;Dbxref=Genbank:WP_016192517.1;Name=WP_016192517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025954.1;locus_tag=LU631_RS14030;product=energy transducer TonB;protein_id=WP_016192517.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2627500 2627760 . - . ID=gene-LU631_RS14035;Name=LU631_RS14035;end_range=2627760,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14035;old_locus_tag=LU631_14035;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2627500 2627760 . - 0 ID=cds-LU631_RS14035;Parent=gene-LU631_RS14035;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2627760,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157758.1;locus_tag=LU631_RS14035;partial=true;product=acyl-CoA esterase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2627834 2629034 . + . ID=gene-LU631_RS14040;Name=LU631_RS14040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14040;old_locus_tag=LU631_14040;pseudo=true NZ_CP089940.1 Protein Homology CDS 2627834 2629034 . + 0 ID=cds-LU631_RS14040;Parent=gene-LU631_RS14040;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU631_RS14040;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2629276 2629973 . + . ID=gene-LU631_RS14045;Name=LU631_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14045;old_locus_tag=LU631_14045 NZ_CP089940.1 Protein Homology CDS 2629276 2629525 . + 0 ID=cds-WP_232426911.1;Parent=gene-LU631_RS14045;Dbxref=Genbank:WP_232426911.1;Name=WP_232426911.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS14045;product=IS1 family transposase;protein_id=WP_232426911.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 2629525 2629973 . + 2 ID=cds-WP_232426911.1;Parent=gene-LU631_RS14045;Dbxref=Genbank:WP_232426911.1;Name=WP_232426911.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS14045;product=IS1 family transposase;protein_id=WP_232426911.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2630219 2630629 . - . ID=gene-LU631_RS14050;Name=LU631_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14050;old_locus_tag=LU631_14050 NZ_CP089940.1 Protein Homology CDS 2630219 2630629 . - 0 ID=cds-WP_016192524.1;Parent=gene-LU631_RS14050;Dbxref=Genbank:WP_016192524.1;Name=WP_016192524.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037816.2;locus_tag=LU631_RS14050;product=hypothetical protein;protein_id=WP_016192524.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2630958 2631497 . - . ID=gene-LU631_RS14055;Name=LU631_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14055;old_locus_tag=LU631_14055 NZ_CP089940.1 Protein Homology CDS 2630958 2631497 . - 0 ID=cds-WP_016192526.1;Parent=gene-LU631_RS14055;Dbxref=Genbank:WP_016192526.1;Name=WP_016192526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008106564.1;locus_tag=LU631_RS14055;product=septation protein A;protein_id=WP_016192526.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2631574 2632308 . - . ID=gene-LU631_RS14060;Name=LU631_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14060;old_locus_tag=LU631_14060 NZ_CP089940.1 Protein Homology CDS 2631574 2632308 . - 0 ID=cds-WP_016192527.1;Parent=gene-LU631_RS14060;Dbxref=Genbank:WP_016192527.1;Name=WP_016192527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441335.1;locus_tag=LU631_RS14060;product=YciC family protein;protein_id=WP_016192527.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2632332 2632751 . - . ID=gene-LU631_RS14065;Name=LU631_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14065;old_locus_tag=LU631_14065 NZ_CP089940.1 Protein Homology CDS 2632332 2632751 . - 0 ID=cds-WP_016192528.1;Parent=gene-LU631_RS14065;Dbxref=Genbank:WP_016192528.1;Name=WP_016192528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799875.1;locus_tag=LU631_RS14065;product=YkgJ family cysteine cluster protein;protein_id=WP_016192528.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2632977 2634200 . - . ID=gene-LU631_RS14070;Name=LU631_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14070;old_locus_tag=LU631_14070 NZ_CP089940.1 GeneMarkS-2+ CDS 2632977 2634200 . - 0 ID=cds-WP_016192529.1;Parent=gene-LU631_RS14070;Dbxref=Genbank:WP_016192529.1;Name=WP_016192529.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14070;product=type III effector HopV1;protein_id=WP_016192529.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2634211 2634603 . - . ID=gene-LU631_RS14075;Name=LU631_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14075;old_locus_tag=LU631_14075 NZ_CP089940.1 Protein Homology CDS 2634211 2634603 . - 0 ID=cds-WP_016192530.1;Parent=gene-LU631_RS14075;Dbxref=Genbank:WP_016192530.1;Name=WP_016192530.1;Ontology_term=GO:0030254;gbkey=CDS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: protein motif:HMM:NF017719.2;locus_tag=LU631_RS14075;product=CesT family type III secretion system chaperone;protein_id=WP_016192530.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2635193 2635507 . - . ID=gene-LU631_RS14080;Name=LU631_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14080;old_locus_tag=LU631_14080 NZ_CP089940.1 Protein Homology CDS 2635193 2635507 . - 0 ID=cds-WP_016192531.1;Parent=gene-LU631_RS14080;Dbxref=Genbank:WP_016192531.1;Name=WP_016192531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210636.1;locus_tag=LU631_RS14080;product=BON domain-containing protein;protein_id=WP_016192531.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2635665 2636471 . - . ID=gene-LU631_RS14085;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=LU631_RS14085;old_locus_tag=LU631_14085 NZ_CP089940.1 Protein Homology CDS 2635665 2636471 . - 0 ID=cds-WP_016192532.1;Parent=gene-LU631_RS14085;Dbxref=Genbank:WP_016192532.1;Name=WP_016192532.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009089939.1;locus_tag=LU631_RS14085;product=tryptophan synthase subunit alpha;protein_id=WP_016192532.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2636471 2637661 . - . ID=gene-LU631_RS14090;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=LU631_RS14090;old_locus_tag=LU631_14090 NZ_CP089940.1 Protein Homology CDS 2636471 2637661 . - 0 ID=cds-WP_016192533.1;Parent=gene-LU631_RS14090;Dbxref=Genbank:WP_016192533.1;Name=WP_016192533.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441339.1;locus_tag=LU631_RS14090;product=tryptophan synthase subunit beta;protein_id=WP_016192533.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2637712 2639073 . - . ID=gene-LU631_RS14095;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=LU631_RS14095;old_locus_tag=LU631_14095 NZ_CP089940.1 Protein Homology CDS 2637712 2639073 . - 0 ID=cds-WP_016192534.1;Parent=gene-LU631_RS14095;Dbxref=Genbank:WP_016192534.1;Name=WP_016192534.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157749.1;locus_tag=LU631_RS14095;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_016192534.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2639076 2640668 . - . ID=gene-LU631_RS14100;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=pseudogene;locus_tag=LU631_RS14100;old_locus_tag=LU631_14100;pseudo=true NZ_CP089940.1 Protein Homology CDS 2639076 2640668 . - 0 ID=cds-LU631_RS14100;Parent=gene-LU631_RS14100;Note=internal stop;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226462.1;locus_tag=LU631_RS14100;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2640668 2642230 . - . ID=gene-LU631_RS14105;Name=LU631_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14105;old_locus_tag=LU631_14105 NZ_CP089940.1 Protein Homology CDS 2640668 2642230 . - 0 ID=cds-WP_016192537.1;Parent=gene-LU631_RS14105;Dbxref=Genbank:WP_016192537.1;Name=WP_016192537.1;Ontology_term=GO:0009058,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441343.1;locus_tag=LU631_RS14105;product=anthranilate synthase component 1;protein_id=WP_016192537.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2642496 2643401 . + . ID=gene-LU631_RS14110;Name=LU631_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14110;old_locus_tag=LU631_14110 NZ_CP089940.1 Protein Homology CDS 2642496 2643401 . + 0 ID=cds-WP_040465796.1;Parent=gene-LU631_RS14110;Dbxref=Genbank:WP_040465796.1;Name=WP_040465796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667982.1;locus_tag=LU631_RS14110;product=PHP domain-containing protein;protein_id=WP_040465796.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2643416 2644036 . + . ID=gene-LU631_RS14115;Name=LU631_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14115;old_locus_tag=LU631_14115 NZ_CP089940.1 Protein Homology CDS 2643416 2644036 . + 0 ID=cds-WP_046371859.1;Parent=gene-LU631_RS14115;Dbxref=Genbank:WP_046371859.1;Name=WP_046371859.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005968666.1;locus_tag=LU631_RS14115;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_046371859.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2644116 2645192 . - . ID=gene-LU631_RS14120;Name=LU631_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14120;old_locus_tag=LU631_14120 NZ_CP089940.1 Protein Homology CDS 2644116 2645192 . - 0 ID=cds-WP_016192540.1;Parent=gene-LU631_RS14120;Dbxref=Genbank:WP_016192540.1;Name=WP_016192540.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.2;locus_tag=LU631_RS14120;product=glycosyltransferase;protein_id=WP_016192540.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2645619 2646316 . - . ID=gene-LU631_RS14125;Name=LU631_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14125;old_locus_tag=LU631_14125 NZ_CP089940.1 Protein Homology CDS 2646055 2646316 . - 0 ID=cds-WP_233481909.1;Parent=gene-LU631_RS14125;Dbxref=Genbank:WP_233481909.1;Name=WP_233481909.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS14125;product=IS1 family transposase;protein_id=WP_233481909.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 2645619 2646055 . - 2 ID=cds-WP_233481909.1;Parent=gene-LU631_RS14125;Dbxref=Genbank:WP_233481909.1;Name=WP_233481909.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS14125;product=IS1 family transposase;protein_id=WP_233481909.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2647190 2648053 . + . ID=gene-LU631_RS14130;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=LU631_RS14130;old_locus_tag=LU631_14130 NZ_CP089940.1 Protein Homology CDS 2647190 2648053 . + 0 ID=cds-WP_016192542.1;Parent=gene-LU631_RS14130;Dbxref=Genbank:WP_016192542.1;Name=WP_016192542.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509251.1;locus_tag=LU631_RS14130;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_016192542.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2648595 2649356 . - . ID=gene-LU631_RS14135;Name=LU631_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14135;old_locus_tag=LU631_14135 NZ_CP089940.1 Protein Homology CDS 2648595 2649356 . - 0 ID=cds-WP_016192543.1;Parent=gene-LU631_RS14135;Dbxref=Genbank:WP_016192543.1;Name=WP_016192543.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004387663.1;locus_tag=LU631_RS14135;product=YciK family oxidoreductase;protein_id=WP_016192543.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2649554 2650603 . + . ID=gene-LU631_RS14140;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=LU631_RS14140;old_locus_tag=LU631_14140 NZ_CP089940.1 Protein Homology CDS 2649554 2650603 . + 0 ID=cds-WP_016192544.1;Parent=gene-LU631_RS14140;Dbxref=Genbank:WP_016192544.1;Name=WP_016192544.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699213.1;locus_tag=LU631_RS14140;product=protease SohB;protein_id=WP_016192544.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2650753 2651746 . - . ID=gene-LU631_RS14145;Name=LU631_RS14145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14145;old_locus_tag=LU631_14145;pseudo=true NZ_CP089940.1 Protein Homology CDS 2650753 2651746 . - 0 ID=cds-LU631_RS14145;Parent=gene-LU631_RS14145;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS14145;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2652020 2652124 . + . ID=gene-LU631_RS14150;Name=LU631_RS14150;end_range=2652124,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14150;old_locus_tag=LU631_14150;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2652020 2652124 . + 0 ID=cds-LU631_RS14150;Parent=gene-LU631_RS14150;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2652124,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011787828.1;locus_tag=LU631_RS14150;partial=true;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2652123 2653297 . - . ID=gene-LU631_RS14155;Name=LU631_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14155;old_locus_tag=LU631_14155 NZ_CP089940.1 Protein Homology CDS 2653042 2653297 . - 0 ID=cds-WP_152664153.1;Parent=gene-LU631_RS14155;Dbxref=Genbank:WP_152664153.1;Name=WP_152664153.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612096.1;locus_tag=LU631_RS14155;product=IS3 family transposase;protein_id=WP_152664153.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 2652123 2653042 . - 2 ID=cds-WP_152664153.1;Parent=gene-LU631_RS14155;Dbxref=Genbank:WP_152664153.1;Name=WP_152664153.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612096.1;locus_tag=LU631_RS14155;product=IS3 family transposase;protein_id=WP_152664153.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2653399 2653743 . - . ID=gene-LU631_RS14160;Name=LU631_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14160;old_locus_tag=LU631_14160 NZ_CP089940.1 Protein Homology CDS 2653399 2653743 . - 0 ID=cds-WP_040465797.1;Parent=gene-LU631_RS14160;Dbxref=Genbank:WP_040465797.1;Name=WP_040465797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189487.1;locus_tag=LU631_RS14160;product=hypothetical protein;protein_id=WP_040465797.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2653809 2654351 . - . ID=gene-LU631_RS14165;Name=LU631_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14165;old_locus_tag=LU631_14165 NZ_CP089940.1 Protein Homology CDS 2653809 2654351 . - 0 ID=cds-WP_016192547.1;Parent=gene-LU631_RS14165;Dbxref=Genbank:WP_016192547.1;Name=WP_016192547.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: protein motif:HMM:NF013661.2;locus_tag=LU631_RS14165;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_016192547.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2654379 2654579 . - . ID=gene-LU631_RS14170;Name=LU631_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14170;old_locus_tag=LU631_14170 NZ_CP089940.1 GeneMarkS-2+ CDS 2654379 2654579 . - 0 ID=cds-WP_016192548.1;Parent=gene-LU631_RS14170;Dbxref=Genbank:WP_016192548.1;Name=WP_016192548.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14170;product=hypothetical protein;protein_id=WP_016192548.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2654500 2654757 . - . ID=gene-LU631_RS14175;Name=LU631_RS14175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14175;old_locus_tag=LU631_14175;partial=true;pseudo=true;start_range=.,2654500 NZ_CP089940.1 Protein Homology CDS 2654500 2654757 . - 0 ID=cds-LU631_RS14175;Parent=gene-LU631_RS14175;Note=fermentative%3B catalyzes the formationof pyruvate from lactate%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132304.1;locus_tag=LU631_RS14175;partial=true;product=2-hydroxyacid dehydrogenase;pseudo=true;start_range=.,2654500;transl_table=11 NZ_CP089940.1 RefSeq gene 2655006 2657633 . + . ID=gene-LU631_RS14180;Name=LU631_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14180;old_locus_tag=LU631_14180 NZ_CP089940.1 Protein Homology CDS 2655006 2657633 . + 0 ID=cds-WP_016192549.1;Parent=gene-LU631_RS14180;Dbxref=Genbank:WP_016192549.1;Name=WP_016192549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157656.1;locus_tag=LU631_RS14180;product=YdbH family protein;protein_id=WP_016192549.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2657620 2657808 . + . ID=gene-LU631_RS14185;Name=LU631_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14185;old_locus_tag=LU631_14185 NZ_CP089940.1 Protein Homology CDS 2657620 2657808 . + 0 ID=cds-WP_016192550.1;Parent=gene-LU631_RS14185;Dbxref=Genbank:WP_016192550.1;Name=WP_016192550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010618431.1;locus_tag=LU631_RS14185;product=YnbE family lipoprotein;protein_id=WP_016192550.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2657819 2658145 . + . ID=gene-LU631_RS14190;Name=LU631_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14190;old_locus_tag=LU631_14190 NZ_CP089940.1 Protein Homology CDS 2657819 2658145 . + 0 ID=cds-WP_016192551.1;Parent=gene-LU631_RS14190;Dbxref=Genbank:WP_016192551.1;Name=WP_016192551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157653.1;locus_tag=LU631_RS14190;product=YdbL family protein;protein_id=WP_016192551.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2658244 2658609 . - . ID=gene-LU631_RS14195;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS14195;old_locus_tag=LU631_14195 NZ_CP089940.1 Protein Homology CDS 2658244 2658609 . - 0 ID=cds-WP_152664154.1;Parent=gene-LU631_RS14195;Dbxref=Genbank:WP_152664154.1;Name=WP_152664154.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041205574.1;locus_tag=LU631_RS14195;product=IS200/IS605 family transposase;protein_id=WP_152664154.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2658728 2659890 . + . ID=gene-LU631_RS14200;Name=LU631_RS14200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14200;old_locus_tag=LU631_14200;pseudo=true NZ_CP089940.1 Protein Homology CDS 2658728 2659890 . + 0 ID=cds-LU631_RS14200;Parent=gene-LU631_RS14200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000942659.1;locus_tag=LU631_RS14200;product=RNA-guided endonuclease TnpB family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2660014 2660145 . - . ID=gene-LU631_RS14205;Name=LU631_RS14205;end_range=2660145,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14205;old_locus_tag=LU631_14205;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2660014 2660145 . - 0 ID=cds-LU631_RS14205;Parent=gene-LU631_RS14205;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2660145,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611700.1;locus_tag=LU631_RS14205;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2660218 2660388 . - . ID=gene-LU631_RS14210;Name=LU631_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14210;old_locus_tag=LU631_14210 NZ_CP089940.1 GeneMarkS-2+ CDS 2660218 2660388 . - 0 ID=cds-WP_200896945.1;Parent=gene-LU631_RS14210;Dbxref=Genbank:WP_200896945.1;Name=WP_200896945.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14210;product=hypothetical protein;protein_id=WP_200896945.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2660323 2661020 . + . ID=gene-LU631_RS14215;Name=LU631_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14215;old_locus_tag=LU631_14215 NZ_CP089940.1 Protein Homology CDS 2660323 2660584 . + 0 ID=cds-WP_233481910.1;Parent=gene-LU631_RS14215;Dbxref=Genbank:WP_233481910.1;Name=WP_233481910.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS14215;product=IS1 family transposase;protein_id=WP_233481910.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 2660584 2661020 . + 2 ID=cds-WP_233481910.1;Parent=gene-LU631_RS14215;Dbxref=Genbank:WP_233481910.1;Name=WP_233481910.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS14215;product=IS1 family transposase;protein_id=WP_233481910.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2661211 2661816 . - . ID=gene-LU631_RS14220;Name=LU631_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14220;old_locus_tag=LU631_14220 NZ_CP089940.1 Protein Homology CDS 2661211 2661816 . - 0 ID=cds-WP_016192552.1;Parent=gene-LU631_RS14220;Dbxref=Genbank:WP_016192552.1;Name=WP_016192552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707664.1;locus_tag=LU631_RS14220;product=FMN-dependent NADH-azoreductase;protein_id=WP_016192552.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2662049 2665945 . + . ID=gene-LU631_RS14225;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=LU631_RS14225;old_locus_tag=LU631_14225 NZ_CP089940.1 Protein Homology CDS 2662049 2665945 . + 0 ID=cds-WP_040465798.1;Parent=gene-LU631_RS14225;Dbxref=Genbank:WP_040465798.1;Name=WP_040465798.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202294.1;locus_tag=LU631_RS14225;product=ATP-dependent RNA helicase HrpA;protein_id=WP_040465798.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2666297 2667796 . + . ID=gene-LU631_RS14230;Name=LU631_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14230;old_locus_tag=LU631_14230 NZ_CP089940.1 Protein Homology CDS 2666297 2667796 . + 0 ID=cds-WP_016192554.1;Parent=gene-LU631_RS14230;Dbxref=Genbank:WP_016192554.1;Name=WP_016192554.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012814640.1;locus_tag=LU631_RS14230;product=methyl-accepting chemotaxis protein;protein_id=WP_016192554.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2667914 2668195 . + . ID=gene-LU631_RS14235;Name=LU631_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14235;old_locus_tag=LU631_14235 NZ_CP089940.1 GeneMarkS-2+ CDS 2667914 2668195 . + 0 ID=cds-WP_016192555.1;Parent=gene-LU631_RS14235;Dbxref=Genbank:WP_016192555.1;Name=WP_016192555.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14235;product=hypothetical protein;protein_id=WP_016192555.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2668184 2669347 . - . ID=gene-LU631_RS14240;Name=LU631_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14240;old_locus_tag=LU631_14240 NZ_CP089940.1 Protein Homology CDS 2668184 2669347 . - 0 ID=cds-WP_016192556.1;Parent=gene-LU631_RS14240;Dbxref=Genbank:WP_016192556.1;Name=WP_016192556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668005.1;locus_tag=LU631_RS14240;product=hypothetical protein;protein_id=WP_016192556.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2669453 2670265 . - . ID=gene-LU631_RS14245;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=LU631_RS14245;old_locus_tag=LU631_14245 NZ_CP089940.1 Protein Homology CDS 2669453 2670265 . - 0 ID=cds-WP_016192557.1;Parent=gene-LU631_RS14245;Dbxref=Genbank:WP_016192557.1;Name=WP_016192557.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230462.1;locus_tag=LU631_RS14245;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_016192557.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2670265 2671257 . - . ID=gene-LU631_RS14250;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=LU631_RS14250;old_locus_tag=LU631_14250 NZ_CP089940.1 Protein Homology CDS 2670265 2671257 . - 0 ID=cds-WP_016192558.1;Parent=gene-LU631_RS14250;Dbxref=Genbank:WP_016192558.1;Name=WP_016192558.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001128868.1;locus_tag=LU631_RS14250;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_016192558.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2671258 2672148 . - . ID=gene-LU631_RS14255;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=LU631_RS14255;old_locus_tag=LU631_14255 NZ_CP089940.1 Protein Homology CDS 2671258 2672148 . - 0 ID=cds-WP_016192559.1;Parent=gene-LU631_RS14255;Dbxref=Genbank:WP_016192559.1;Name=WP_016192559.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001146150.1;locus_tag=LU631_RS14255;product=peptide ABC transporter permease SapC;protein_id=WP_016192559.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2672694 2673340 . - . ID=gene-LU631_RS14260;Name=LU631_RS14260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14260;old_locus_tag=LU631_14260;partial=true;pseudo=true;start_range=.,2672694 NZ_CP089940.1 Protein Homology CDS 2672694 2673340 . - 0 ID=cds-LU631_RS14260;Parent=gene-LU631_RS14260;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS14260;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,2672694;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2673455 2674654 . + . ID=gene-LU631_RS14265;Name=LU631_RS14265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14265;old_locus_tag=LU631_14265;pseudo=true NZ_CP089940.1 Protein Homology CDS 2673455 2674654 . + 0 ID=cds-LU631_RS14265;Parent=gene-LU631_RS14265;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU631_RS14265;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2674841 2678134 . - . ID=gene-LU631_RS14270;Name=LU631_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14270;old_locus_tag=LU631_14270 NZ_CP089940.1 Protein Homology CDS 2674841 2678134 . - 0 ID=cds-WP_233481911.1;Parent=gene-LU631_RS14270;Dbxref=Genbank:WP_233481911.1;Name=WP_233481911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193188.1;locus_tag=LU631_RS14270;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_233481911.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2678386 2678831 . + . ID=gene-LU631_RS14275;Name=LU631_RS14275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14275;old_locus_tag=LU631_14275;pseudo=true NZ_CP089940.1 Protein Homology CDS 2678386 2678831 . + 0 ID=cds-LU631_RS14275;Parent=gene-LU631_RS14275;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU631_RS14275;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2678927 2679172 . + . ID=gene-LU631_RS14280;Name=LU631_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14280;old_locus_tag=LU631_14280 NZ_CP089940.1 GeneMarkS-2+ CDS 2678927 2679172 . + 0 ID=cds-WP_016192565.1;Parent=gene-LU631_RS14280;Dbxref=Genbank:WP_016192565.1;Name=WP_016192565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14280;product=hypothetical protein;protein_id=WP_016192565.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2679547 2679687 . + . ID=gene-LU631_RS14285;Name=LU631_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14285;old_locus_tag=LU631_14285 NZ_CP089940.1 GeneMarkS-2+ CDS 2679547 2679687 . + 0 ID=cds-WP_200896946.1;Parent=gene-LU631_RS14285;Dbxref=Genbank:WP_200896946.1;Name=WP_200896946.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14285;product=hypothetical protein;protein_id=WP_200896946.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2679652 2680097 . - . ID=gene-LU631_RS14290;Name=LU631_RS14290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14290;old_locus_tag=LU631_14290;partial=true;pseudo=true;start_range=.,2679652 NZ_CP089940.1 Protein Homology CDS 2679652 2680097 . - 0 ID=cds-LU631_RS14290;Parent=gene-LU631_RS14290;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU631_RS14290;partial=true;product=transposase;pseudo=true;start_range=.,2679652;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2680169 2680939 . + . ID=gene-LU631_RS14295;Name=LU631_RS14295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14295;old_locus_tag=LU631_14295;partial=true;pseudo=true;start_range=.,2680169 NZ_CP089940.1 Protein Homology CDS 2680169 2680939 . + 0 ID=cds-LU631_RS14295;Parent=gene-LU631_RS14295;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558296.1;locus_tag=LU631_RS14295;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,2680169;transl_table=11 NZ_CP089940.1 RefSeq gene 2680927 2682249 . - . ID=gene-LU631_RS14300;Name=LU631_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14300;old_locus_tag=LU631_14300 NZ_CP089940.1 Protein Homology CDS 2680927 2682249 . - 0 ID=cds-WP_046371868.1;Parent=gene-LU631_RS14300;Dbxref=Genbank:WP_046371868.1;Name=WP_046371868.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS14300;product=IS4 family transposase;protein_id=WP_046371868.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2682394 2682519 . - . ID=gene-LU631_RS14305;Name=LU631_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14305;old_locus_tag=LU631_14305 NZ_CP089940.1 GeneMarkS-2+ CDS 2682394 2682519 . - 0 ID=cds-WP_016192568.1;Parent=gene-LU631_RS14305;Dbxref=Genbank:WP_016192568.1;Name=WP_016192568.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14305;product=DUF2498 family protein;protein_id=WP_016192568.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2682924 2685536 . + . ID=gene-LU631_RS14310;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=LU631_RS14310;old_locus_tag=LU631_14310 NZ_CP089940.1 Protein Homology CDS 2682924 2685536 . + 0 ID=cds-WP_016192569.1;Parent=gene-LU631_RS14310;Dbxref=Genbank:WP_016192569.1;Name=WP_016192569.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157737.1;locus_tag=LU631_RS14310;product=type I DNA topoisomerase;protein_id=WP_016192569.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2685744 2686718 . + . ID=gene-LU631_RS14315;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=LU631_RS14315;old_locus_tag=LU631_14315 NZ_CP089940.1 Protein Homology CDS 2685744 2686718 . + 0 ID=cds-WP_016192570.1;Parent=gene-LU631_RS14315;Dbxref=Genbank:WP_016192570.1;Name=WP_016192570.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=LU631_RS14315;product=HTH-type transcriptional regulator CysB;protein_id=WP_016192570.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2686791 2687488 . + . ID=gene-LU631_RS14320;Name=LU631_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14320;old_locus_tag=LU631_14320 NZ_CP089940.1 Protein Homology CDS 2686791 2687040 . + 0 ID=cds-WP_233481912.1;Parent=gene-LU631_RS14320;Dbxref=Genbank:WP_233481912.1;Name=WP_233481912.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS14320;product=IS1 family transposase;protein_id=WP_233481912.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 2687040 2687488 . + 2 ID=cds-WP_233481912.1;Parent=gene-LU631_RS14320;Dbxref=Genbank:WP_233481912.1;Name=WP_233481912.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS14320;product=IS1 family transposase;protein_id=WP_233481912.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2687964 2688125 . + . ID=gene-LU631_RS14325;Name=LU631_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14325;old_locus_tag=LU631_14325 NZ_CP089940.1 Protein Homology CDS 2687964 2688125 . + 0 ID=cds-WP_016192571.1;Parent=gene-LU631_RS14325;Dbxref=Genbank:WP_016192571.1;Name=WP_016192571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009089968.1;locus_tag=LU631_RS14325;product=YmiA family putative membrane protein;protein_id=WP_016192571.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2688714 2689708 . - . ID=gene-LU631_RS14330;Name=LU631_RS14330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14330;old_locus_tag=LU631_14330;partial=true;pseudo=true;start_range=.,2688714 NZ_CP089940.1 Protein Homology CDS 2688714 2689708 . - 0 ID=cds-LU631_RS14330;Parent=gene-LU631_RS14330;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671526.1;locus_tag=LU631_RS14330;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,2688714;transl_table=11 NZ_CP089940.1 RefSeq gene 2689952 2690539 . - . ID=gene-LU631_RS14335;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=LU631_RS14335;old_locus_tag=LU631_14335 NZ_CP089940.1 Protein Homology CDS 2689952 2690539 . - 0 ID=cds-WP_016192576.1;Parent=gene-LU631_RS14335;Dbxref=Genbank:WP_016192576.1;Name=WP_016192576.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509242.1;locus_tag=LU631_RS14335;product=GTP cyclohydrolase II;protein_id=WP_016192576.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2690769 2691530 . + . ID=gene-LU631_RS14340;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=LU631_RS14340;old_locus_tag=LU631_14340 NZ_CP089940.1 Protein Homology CDS 2690769 2691530 . + 0 ID=cds-WP_016192577.1;Parent=gene-LU631_RS14340;Dbxref=Genbank:WP_016192577.1;Name=WP_016192577.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003853858.1;locus_tag=LU631_RS14340;product=phosphatidylglycerophosphatase B;protein_id=WP_016192577.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2691679 2691921 . + . ID=gene-LU631_RS14345;Name=LU631_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14345;old_locus_tag=LU631_14345 NZ_CP089940.1 Protein Homology CDS 2691679 2691921 . + 0 ID=cds-WP_016192578.1;Parent=gene-LU631_RS14345;Dbxref=Genbank:WP_016192578.1;Name=WP_016192578.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000876286.1;locus_tag=LU631_RS14345;product=lipopolysaccharide assembly protein LapA domain-containing protein;protein_id=WP_016192578.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2692020 2693189 . + . ID=gene-LU631_RS14350;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=LU631_RS14350;old_locus_tag=LU631_14350 NZ_CP089940.1 Protein Homology CDS 2692020 2693189 . + 0 ID=cds-WP_016192579.1;Parent=gene-LU631_RS14350;Dbxref=Genbank:WP_016192579.1;Name=WP_016192579.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=LU631_RS14350;product=lipopolysaccharide assembly protein LapB;protein_id=WP_016192579.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2693388 2694104 . + . ID=gene-LU631_RS14355;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=LU631_RS14355;old_locus_tag=LU631_14355 NZ_CP089940.1 Protein Homology CDS 2693388 2694104 . + 0 ID=cds-WP_016192580.1;Parent=gene-LU631_RS14355;Dbxref=Genbank:WP_016192580.1;Name=WP_016192580.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169882.1;locus_tag=LU631_RS14355;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_016192580.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2694104 2694430 . + . ID=gene-LU631_RS14360;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=LU631_RS14360;old_locus_tag=LU631_14360 NZ_CP089940.1 Protein Homology CDS 2694104 2694430 . + 0 ID=cds-WP_016192581.1;Parent=gene-LU631_RS14360;Dbxref=Genbank:WP_016192581.1;Name=WP_016192581.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415798.2;locus_tag=LU631_RS14360;product=stress response translation initiation inhibitor YciH;protein_id=WP_016192581.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2694486 2695692 . - . ID=gene-LU631_RS14365;Name=LU631_RS14365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14365;old_locus_tag=LU631_14365;pseudo=true NZ_CP089940.1 Protein Homology CDS 2694486 2695692 . - 0 ID=cds-LU631_RS14365;Parent=gene-LU631_RS14365;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU631_RS14365;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2695696 2696157 . - . ID=gene-LU631_RS14370;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS14370;old_locus_tag=LU631_14370 NZ_CP089940.1 Protein Homology CDS 2695696 2696157 . - 0 ID=cds-WP_046371869.1;Parent=gene-LU631_RS14370;Dbxref=Genbank:WP_046371869.1;Name=WP_046371869.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191989.1;locus_tag=LU631_RS14370;product=IS200/IS605 family transposase;protein_id=WP_046371869.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2696314 2697511 . + . ID=gene-LU631_RS14375;Name=guaD;end_range=2697511,.;gbkey=Gene;gene=guaD;gene_biotype=pseudogene;locus_tag=LU631_RS14375;old_locus_tag=LU631_14375;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2696314 2697511 . + 0 ID=cds-LU631_RS14375;Parent=gene-LU631_RS14375;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006147,GO:0008892;end_range=2697511,.;gbkey=CDS;gene=guaD;go_function=guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004944058.1;locus_tag=LU631_RS14375;partial=true;product=guanine deaminase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2697625 2697828 . + . ID=gene-LU631_RS14380;Name=LU631_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14380;old_locus_tag=LU631_14380 NZ_CP089940.1 GeneMarkS-2+ CDS 2697625 2697828 . + 0 ID=cds-WP_016192586.1;Parent=gene-LU631_RS14380;Dbxref=Genbank:WP_016192586.1;Name=WP_016192586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14380;product=hypothetical protein;protein_id=WP_016192586.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2697992 2698438 . + . ID=gene-LU631_RS14385;Name=LU631_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14385;old_locus_tag=LU631_14385 NZ_CP089940.1 Protein Homology CDS 2697992 2698438 . + 0 ID=cds-WP_016192587.1;Parent=gene-LU631_RS14385;Dbxref=Genbank:WP_016192587.1;Name=WP_016192587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202285.1;locus_tag=LU631_RS14385;product=DUF441 domain-containing protein;protein_id=WP_016192587.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2698915 2700189 . - . ID=gene-LU631_RS14390;Name=LU631_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14390;old_locus_tag=LU631_14390 NZ_CP089940.1 Protein Homology CDS 2698915 2700189 . - 0 ID=cds-WP_016192588.1;Parent=gene-LU631_RS14390;Dbxref=Genbank:WP_016192588.1;Name=WP_016192588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=LU631_RS14390;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WP_016192588.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2700771 2702429 . + . ID=gene-LU631_RS14395;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=LU631_RS14395;old_locus_tag=LU631_14395 NZ_CP089940.1 Protein Homology CDS 2700771 2702429 . + 0 ID=cds-WP_016192589.1;Parent=gene-LU631_RS14395;Dbxref=Genbank:WP_016192589.1;Name=WP_016192589.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007886024.1;locus_tag=LU631_RS14395;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_016192589.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2702613 2703809 . + . ID=gene-LU631_RS14400;Name=LU631_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14400;old_locus_tag=LU631_14400 NZ_CP089940.1 Protein Homology CDS 2702613 2703809 . + 0 ID=cds-WP_016192590.1;Parent=gene-LU631_RS14400;Dbxref=Genbank:WP_016192590.1;Name=WP_016192590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544262.1;locus_tag=LU631_RS14400;product=trans-2-enoyl-CoA reductase family protein;protein_id=WP_016192590.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2704002 2704372 . + . ID=gene-LU631_RS14405;Name=LU631_RS14405;end_range=2704372,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14405;old_locus_tag=LU631_14405;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2704002 2704372 . + 0 ID=cds-LU631_RS14405;Parent=gene-LU631_RS14405;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2704372,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011497995.1;locus_tag=LU631_RS14405;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2704783 2705480 . + . ID=gene-LU631_RS14410;Name=LU631_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14410;old_locus_tag=LU631_14410 NZ_CP089940.1 Protein Homology CDS 2704783 2705032 . + 0 ID=cds-WP_233481913.1;Parent=gene-LU631_RS14410;Dbxref=Genbank:WP_233481913.1;Name=WP_233481913.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS14410;product=IS1 family transposase;protein_id=WP_233481913.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 2705032 2705480 . + 2 ID=cds-WP_233481913.1;Parent=gene-LU631_RS14410;Dbxref=Genbank:WP_233481913.1;Name=WP_233481913.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS14410;product=IS1 family transposase;protein_id=WP_233481913.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2706009 2706705 . + . ID=gene-LU631_RS14415;Name=LU631_RS14415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14415;old_locus_tag=LU631_14415;pseudo=true NZ_CP089940.1 Protein Homology CDS 2706009 2706705 . + 0 ID=cds-LU631_RS14415;Parent=gene-LU631_RS14415;Note=frameshifted;Ontology_term=GO:0004089;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013512251.1;locus_tag=LU631_RS14415;product=carbonic anhydrase family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2706944 2707784 . - . ID=gene-LU631_RS14420;Name=LU631_RS14420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14420;old_locus_tag=LU631_14420;pseudo=true NZ_CP089940.1 Protein Homology CDS 2706944 2707784 . - 0 ID=cds-LU631_RS14420;Parent=gene-LU631_RS14420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009636102.1;locus_tag=LU631_RS14420;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2707822 2708232 . + . ID=gene-LU631_RS14425;Name=LU631_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14425;old_locus_tag=LU631_14425 NZ_CP089940.1 Protein Homology CDS 2707822 2708232 . + 0 ID=cds-WP_016192598.1;Parent=gene-LU631_RS14425;Dbxref=Genbank:WP_016192598.1;Name=WP_016192598.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022807.2;locus_tag=LU631_RS14425;product=DUF3164 family protein;protein_id=WP_016192598.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2708310 2708498 . + . ID=gene-LU631_RS14430;Name=LU631_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14430;old_locus_tag=LU631_14430 NZ_CP089940.1 Protein Homology CDS 2708310 2708498 . + 0 ID=cds-WP_016192599.1;Parent=gene-LU631_RS14430;Dbxref=Genbank:WP_016192599.1;Name=WP_016192599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001569384.1;locus_tag=LU631_RS14430;product=hypothetical protein;protein_id=WP_016192599.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2708495 2708758 . + . ID=gene-LU631_RS14435;Name=LU631_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14435;old_locus_tag=LU631_14435 NZ_CP089940.1 Protein Homology CDS 2708495 2708758 . + 0 ID=cds-WP_016192600.1;Parent=gene-LU631_RS14435;Dbxref=Genbank:WP_016192600.1;Name=WP_016192600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001446462.1;locus_tag=LU631_RS14435;product=hypothetical protein;protein_id=WP_016192600.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2708745 2709398 . + . ID=gene-LU631_RS14440;Name=LU631_RS14440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14440;old_locus_tag=LU631_14440;pseudo=true NZ_CP089940.1 Protein Homology CDS 2708745 2709398 . + 0 ID=cds-LU631_RS14440;Parent=gene-LU631_RS14440;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118592.1;locus_tag=LU631_RS14440;product=DUF2786 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2709391 2709592 . + . ID=gene-LU631_RS14445;Name=LU631_RS14445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14445;old_locus_tag=LU631_14445;pseudo=true NZ_CP089940.1 Protein Homology CDS 2709391 2709592 . + 0 ID=cds-LU631_RS14445;Parent=gene-LU631_RS14445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000967768.1;locus_tag=LU631_RS14445;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2709582 2710010 . + . ID=gene-LU631_RS14450;Name=LU631_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14450;old_locus_tag=LU631_14450 NZ_CP089940.1 Protein Homology CDS 2709582 2710010 . + 0 ID=cds-WP_040465802.1;Parent=gene-LU631_RS14450;Dbxref=Genbank:WP_040465802.1;Name=WP_040465802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803499.1;locus_tag=LU631_RS14450;product=regulatory protein GemA;protein_id=WP_040465802.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2710007 2710396 . + . ID=gene-LU631_RS14455;Name=LU631_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14455;old_locus_tag=LU631_14455 NZ_CP089940.1 Protein Homology CDS 2710007 2710396 . + 0 ID=cds-WP_016192602.1;Parent=gene-LU631_RS14455;Dbxref=Genbank:WP_016192602.1;Name=WP_016192602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001281697.1;locus_tag=LU631_RS14455;product=phage transcriptional regulator;protein_id=WP_016192602.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2710443 2710736 . - . ID=gene-LU631_RS14460;Name=LU631_RS14460;end_range=2710736,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14460;old_locus_tag=LU631_14460;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2710443 2710736 . - 0 ID=cds-LU631_RS14460;Parent=gene-LU631_RS14460;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2710736,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS14460;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2710837 2711874 . + . ID=gene-LU631_RS14465;Name=LU631_RS14465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14465;old_locus_tag=LU631_14465;pseudo=true NZ_CP089940.1 Protein Homology CDS 2710837 2711874 . + 0 ID=cds-LU631_RS14465;Parent=gene-LU631_RS14465;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS14465;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2712020 2712313 . - . ID=gene-LU631_RS14470;Name=LU631_RS14470;end_range=2712313,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14470;old_locus_tag=LU631_14470;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2712020 2712313 . - 0 ID=cds-LU631_RS14470;Parent=gene-LU631_RS14470;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2712313,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS14470;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2712370 2713410 . - . ID=gene-LU631_RS14475;Name=LU631_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14475;old_locus_tag=LU631_14475 NZ_CP089940.1 Protein Homology CDS 2712370 2713410 . - 0 ID=cds-WP_046371797.1-3;Parent=gene-LU631_RS14475;Dbxref=Genbank:WP_046371797.1;Name=WP_046371797.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS14475;product=IS481 family transposase;protein_id=WP_046371797.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2713513 2714133 . - . ID=gene-LU631_RS14480;Name=LU631_RS14480;end_range=2714133,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14480;old_locus_tag=LU631_14480;partial=true;pseudo=true;start_range=.,2713513 NZ_CP089940.1 Protein Homology CDS 2713513 2714133 . - 0 ID=cds-LU631_RS14480;Parent=gene-LU631_RS14480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2714133,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS14480;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,2713513;transl_table=11 NZ_CP089940.1 RefSeq gene 2714589 2715005 . + . ID=gene-LU631_RS14485;Name=LU631_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14485;old_locus_tag=LU631_14485 NZ_CP089940.1 Protein Homology CDS 2714589 2715005 . + 0 ID=cds-WP_016192603.1;Parent=gene-LU631_RS14485;Dbxref=Genbank:WP_016192603.1;Name=WP_016192603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457733.1;locus_tag=LU631_RS14485;product=cupin domain-containing protein;protein_id=WP_016192603.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2715435 2716391 . + . ID=gene-LU631_RS14490;Name=LU631_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14490;old_locus_tag=LU631_14490 NZ_CP089940.1 Protein Homology CDS 2715435 2716391 . + 0 ID=cds-WP_016192604.1;Parent=gene-LU631_RS14490;Dbxref=Genbank:WP_016192604.1;Name=WP_016192604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134480.1;locus_tag=LU631_RS14490;product=ABC transporter substrate-binding protein;protein_id=WP_016192604.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2716646 2716963 . - . ID=gene-LU631_RS14495;Name=LU631_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14495;old_locus_tag=LU631_14495 NZ_CP089940.1 Protein Homology CDS 2716646 2716963 . - 0 ID=cds-WP_016192605.1;Parent=gene-LU631_RS14495;Dbxref=Genbank:WP_016192605.1;Name=WP_016192605.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023190.2;locus_tag=LU631_RS14495;product=L-arabinose isomerase;protein_id=WP_016192605.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2717047 2717451 . + . ID=gene-LU631_RS14500;Name=LU631_RS14500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14500;old_locus_tag=LU631_14500;partial=true;pseudo=true;start_range=.,2717047 NZ_CP089940.1 Protein Homology CDS 2717047 2717451 . + 0 ID=cds-LU631_RS14500;Parent=gene-LU631_RS14500;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS14500;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,2717047;transl_table=11 NZ_CP089940.1 RefSeq gene 2717650 2717940 . - . ID=gene-LU631_RS14505;Name=LU631_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14505;old_locus_tag=LU631_14505 NZ_CP089940.1 Protein Homology CDS 2717650 2717940 . - 0 ID=cds-WP_016192607.1;Parent=gene-LU631_RS14505;Dbxref=Genbank:WP_016192607.1;Name=WP_016192607.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024986.2;locus_tag=LU631_RS14505;product=pentapeptide repeat-containing protein;protein_id=WP_016192607.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2718570 2719538 . - . ID=gene-LU631_RS14510;Name=add;gbkey=Gene;gene=add;gene_biotype=pseudogene;locus_tag=LU631_RS14510;old_locus_tag=LU631_14510;pseudo=true NZ_CP089940.1 Protein Homology CDS 2718570 2719538 . - 0 ID=cds-LU631_RS14510;Parent=gene-LU631_RS14510;Note=frameshifted%3B internal stop;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012144981.1;locus_tag=LU631_RS14510;product=adenosine deaminase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2719802 2719993 . + . ID=gene-LU631_RS14515;Name=LU631_RS14515;end_range=2719993,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14515;old_locus_tag=LU631_14515;partial=true;pseudo=true;start_range=.,2719802 NZ_CP089940.1 Protein Homology CDS 2719802 2719993 . + 0 ID=cds-LU631_RS14515;Parent=gene-LU631_RS14515;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2719993,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230911.1;locus_tag=LU631_RS14515;partial=true;product=type IV secretion protein Rhs;pseudo=true;start_range=.,2719802;transl_table=11 NZ_CP089940.1 RefSeq gene 2720209 2720334 . + . ID=gene-LU631_RS26080;Name=LU631_RS26080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26080 NZ_CP089940.1 GeneMarkS-2+ CDS 2720209 2720334 . + 0 ID=cds-WP_267921519.1;Parent=gene-LU631_RS26080;Dbxref=Genbank:WP_267921519.1;Name=WP_267921519.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS26080;product=hypothetical protein;protein_id=WP_267921519.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2720749 2722293 . - . ID=gene-LU631_RS14520;Name=LU631_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14520;old_locus_tag=LU631_14520 NZ_CP089940.1 Protein Homology CDS 2720749 2722293 . - 0 ID=cds-WP_016192611.1;Parent=gene-LU631_RS14520;Dbxref=Genbank:WP_016192611.1;Name=WP_016192611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802254.1;locus_tag=LU631_RS14520;product=YdgA family protein;protein_id=WP_016192611.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2723642 2723977 . + . ID=gene-LU631_RS14525;Name=LU631_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14525;old_locus_tag=LU631_14525 NZ_CP089940.1 GeneMarkS-2+ CDS 2723642 2723977 . + 0 ID=cds-WP_052734695.1-6;Parent=gene-LU631_RS14525;Dbxref=Genbank:WP_052734695.1;Name=WP_052734695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14525;product=hypothetical protein;protein_id=WP_052734695.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2723986 2725200 . + . ID=gene-LU631_RS14530;Name=LU631_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14530;old_locus_tag=LU631_14530 NZ_CP089940.1 Protein Homology CDS 2723986 2725200 . + 0 ID=cds-WP_046371874.1;Parent=gene-LU631_RS14530;Dbxref=Genbank:WP_046371874.1;Name=WP_046371874.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS14530;product=IS91 family transposase;protein_id=WP_046371874.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2725479 2726876 . + . ID=gene-LU631_RS14535;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=LU631_RS14535;old_locus_tag=LU631_14535 NZ_CP089940.1 Protein Homology CDS 2725479 2726876 . + 0 ID=cds-WP_016192613.1;Parent=gene-LU631_RS14535;Dbxref=Genbank:WP_016192613.1;Name=WP_016192613.1;Ontology_term=GO:0006099,GO:0004333;gbkey=CDS;gene=fumC;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441498.1;locus_tag=LU631_RS14535;product=class II fumarate hydratase;protein_id=WP_016192613.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2726941 2727870 . - . ID=gene-LU631_RS14540;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=LU631_RS14540;old_locus_tag=LU631_14540 NZ_CP089940.1 Protein Homology CDS 2726941 2727870 . - 0 ID=cds-WP_040465804.1;Parent=gene-LU631_RS14540;Dbxref=Genbank:WP_040465804.1;Name=WP_040465804.1;Ontology_term=GO:0006274,GO:0003677;gbkey=CDS;gene=tus;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544240.1;locus_tag=LU631_RS14540;product=DNA replication terminus site-binding protein;protein_id=WP_040465804.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2727998 2728399 . - . ID=gene-LU631_RS14545;Name=LU631_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14545;old_locus_tag=LU631_14545 NZ_CP089940.1 Protein Homology CDS 2727998 2728399 . - 0 ID=cds-WP_016192615.1;Parent=gene-LU631_RS14545;Dbxref=Genbank:WP_016192615.1;Name=WP_016192615.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005460020.1;locus_tag=LU631_RS14545;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_016192615.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2729351 2729791 . + . ID=gene-LU631_RS14550;Name=msrA;end_range=2729791,.;gbkey=Gene;gene=msrA;gene_biotype=pseudogene;locus_tag=LU631_RS14550;old_locus_tag=LU631_14550;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2729351 2729791 . + 0 ID=cds-LU631_RS14550;Parent=gene-LU631_RS14550;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;end_range=2729791,.;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358241.1;locus_tag=LU631_RS14550;partial=true;product=peptide-methionine (S)-S-oxide reductase MsrA;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2729870 2730985 . - . ID=gene-LU631_RS14555;Name=LU631_RS14555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14555;old_locus_tag=LU631_14555;pseudo=true NZ_CP089940.1 Protein Homology CDS 2729870 2730985 . - 0 ID=cds-LU631_RS14555;Parent=gene-LU631_RS14555;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202004.1;locus_tag=LU631_RS14555;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2731056 2731214 . + . ID=gene-LU631_RS14560;Name=LU631_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14560;old_locus_tag=LU631_14560 NZ_CP089940.1 GeneMarkS-2+ CDS 2731056 2731214 . + 0 ID=cds-WP_016192619.1;Parent=gene-LU631_RS14560;Dbxref=Genbank:WP_016192619.1;Name=WP_016192619.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14560;product=LysR family transcriptional regulator;protein_id=WP_016192619.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2731343 2732560 . + . ID=gene-LU631_RS14565;Name=LU631_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14565;old_locus_tag=LU631_14565 NZ_CP089940.1 Protein Homology CDS 2731343 2732560 . + 0 ID=cds-WP_016192620.1;Parent=gene-LU631_RS14565;Dbxref=Genbank:WP_016192620.1;Name=WP_016192620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000225262.1;locus_tag=LU631_RS14565;product=ROK family transcriptional regulator;protein_id=WP_016192620.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2732798 2733469 . + . ID=gene-LU631_RS14570;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=LU631_RS14570;old_locus_tag=LU631_14570 NZ_CP089940.1 Protein Homology CDS 2732798 2733469 . + 0 ID=cds-WP_016192621.1;Parent=gene-LU631_RS14570;Dbxref=Genbank:WP_016192621.1;Name=WP_016192621.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964469.1;locus_tag=LU631_RS14570;product=dethiobiotin synthase;protein_id=WP_016192621.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2733517 2734656 . - . ID=gene-LU631_RS14575;Name=LU631_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14575;old_locus_tag=LU631_14575 NZ_CP089940.1 Protein Homology CDS 2733517 2734656 . - 0 ID=cds-WP_016192622.1;Parent=gene-LU631_RS14575;Dbxref=Genbank:WP_016192622.1;Name=WP_016192622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202008.1;locus_tag=LU631_RS14575;product=ABC transporter ATP-binding protein;protein_id=WP_016192622.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2734656 2735240 . - . ID=gene-LU631_RS14580;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=LU631_RS14580;old_locus_tag=LU631_14580 NZ_CP089940.1 Protein Homology CDS 2734656 2735240 . - 0 ID=cds-WP_232426914.1;Parent=gene-LU631_RS14580;Dbxref=Genbank:WP_232426914.1;Name=WP_232426914.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001586506.1;locus_tag=LU631_RS14580;product=osmoprotectant ABC transporter permease OsmW;protein_id=WP_232426914.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2735313 2736140 . - . ID=gene-LU631_RS14585;Name=LU631_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14585;old_locus_tag=LU631_14585 NZ_CP089940.1 Protein Homology CDS 2735313 2736140 . - 0 ID=cds-WP_232426915.1;Parent=gene-LU631_RS14585;Dbxref=Genbank:WP_232426915.1;Name=WP_232426915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007761450.1;locus_tag=LU631_RS14585;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_232426915.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2736216 2736878 . - . ID=gene-LU631_RS14590;Name=LU631_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14590;old_locus_tag=LU631_14590 NZ_CP089940.1 Protein Homology CDS 2736216 2736878 . - 0 ID=cds-WP_016192625.1;Parent=gene-LU631_RS14590;Dbxref=Genbank:WP_016192625.1;Name=WP_016192625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883640.1;locus_tag=LU631_RS14590;product=ABC transporter permease;protein_id=WP_016192625.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2737353 2737649 . - . ID=gene-LU631_RS14595;Name=LU631_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14595;old_locus_tag=LU631_14595 NZ_CP089940.1 Protein Homology CDS 2737353 2737649 . - 0 ID=cds-WP_016192626.1;Parent=gene-LU631_RS14595;Dbxref=Genbank:WP_016192626.1;Name=WP_016192626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202013.1;locus_tag=LU631_RS14595;product=DUF1161 domain-containing protein;protein_id=WP_016192626.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2737702 2738049 . - . ID=gene-LU631_RS14600;Name=LU631_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14600;old_locus_tag=LU631_14600 NZ_CP089940.1 Protein Homology CDS 2737702 2738049 . - 0 ID=cds-WP_040465817.1;Parent=gene-LU631_RS14600;Dbxref=Genbank:WP_040465817.1;Name=WP_040465817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441487.1;locus_tag=LU631_RS14600;product=DUF1283 family protein;protein_id=WP_040465817.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2738108 2738260 . - . ID=gene-LU631_RS14605;Name=LU631_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14605;old_locus_tag=LU631_14605 NZ_CP089940.1 GeneMarkS-2+ CDS 2738108 2738260 . - 0 ID=cds-WP_233481914.1;Parent=gene-LU631_RS14605;Dbxref=Genbank:WP_233481914.1;Name=WP_233481914.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14605;product=hypothetical protein;protein_id=WP_233481914.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2738340 2739460 . - . ID=gene-LU631_RS14610;Name=LU631_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14610;old_locus_tag=LU631_14610 NZ_CP089940.1 Protein Homology CDS 2739202 2739460 . - 0 ID=cds-WP_152664158.1;Parent=gene-LU631_RS14610;Dbxref=Genbank:WP_152664158.1;Name=WP_152664158.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS14610;product=IS3 family transposase;protein_id=WP_152664158.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 2738340 2739202 . - 2 ID=cds-WP_152664158.1;Parent=gene-LU631_RS14610;Dbxref=Genbank:WP_152664158.1;Name=WP_152664158.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS14610;product=IS3 family transposase;protein_id=WP_152664158.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2739614 2740937 . + . ID=gene-LU631_RS14615;Name=LU631_RS14615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14615;old_locus_tag=LU631_14615;pseudo=true NZ_CP089940.1 Protein Homology CDS 2739614 2740937 . + 0 ID=cds-LU631_RS14615;Parent=gene-LU631_RS14615;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS14615;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2741019 2741555 . + . ID=gene-LU631_RS14620;Name=LU631_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14620;old_locus_tag=LU631_14620 NZ_CP089940.1 Protein Homology CDS 2741019 2741555 . + 0 ID=cds-WP_016192629.1;Parent=gene-LU631_RS14620;Dbxref=Genbank:WP_016192629.1;Name=WP_016192629.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=LU631_RS14620;product=tyrosine-type recombinase/integrase;protein_id=WP_016192629.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2741714 2743645 . - . ID=gene-LU631_RS14625;Name=LU631_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14625;old_locus_tag=LU631_14625 NZ_CP089940.1 Protein Homology CDS 2741714 2743645 . - 0 ID=cds-WP_016192630.1;Parent=gene-LU631_RS14625;Dbxref=Genbank:WP_016192630.1;Name=WP_016192630.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105142.1;locus_tag=LU631_RS14625;product=exoribonuclease II;protein_id=WP_016192630.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2744077 2746386 . - . ID=gene-LU631_RS14630;Name=LU631_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14630;old_locus_tag=LU631_14630 NZ_CP089940.1 Protein Homology CDS 2744077 2746386 . - 0 ID=cds-WP_016192631.1;Parent=gene-LU631_RS14630;Dbxref=Genbank:WP_016192631.1;Name=WP_016192631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010244530.1;locus_tag=LU631_RS14630;product=FdhF/YdeP family oxidoreductase;protein_id=WP_016192631.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2746762 2747459 . + . ID=gene-LU631_RS14635;Name=LU631_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14635;old_locus_tag=LU631_14635 NZ_CP089940.1 Protein Homology CDS 2746762 2747011 . + 0 ID=cds-WP_233481915.1-2;Parent=gene-LU631_RS14635;Dbxref=Genbank:WP_233481915.1;Name=WP_233481915.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS14635;product=IS1 family transposase;protein_id=WP_233481915.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 2747011 2747459 . + 2 ID=cds-WP_233481915.1-2;Parent=gene-LU631_RS14635;Dbxref=Genbank:WP_233481915.1;Name=WP_233481915.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS14635;product=IS1 family transposase;protein_id=WP_233481915.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2747499 2748534 . - . ID=gene-LU631_RS14640;Name=LU631_RS14640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14640;old_locus_tag=LU631_14640;partial=true;pseudo=true;start_range=.,2747499 NZ_CP089940.1 Protein Homology CDS 2747499 2748534 . - 0 ID=cds-LU631_RS14640;Parent=gene-LU631_RS14640;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU631_RS14640;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,2747499;transl_table=11 NZ_CP089940.1 RefSeq gene 2748713 2750107 . - . ID=gene-LU631_RS14645;Name=ascB;gbkey=Gene;gene=ascB;gene_biotype=protein_coding;locus_tag=LU631_RS14645;old_locus_tag=LU631_14645 NZ_CP089940.1 Protein Homology CDS 2748713 2750107 . - 0 ID=cds-WP_016192633.1;Parent=gene-LU631_RS14645;Dbxref=Genbank:WP_016192633.1;Name=WP_016192633.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=ascB;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970377.1;locus_tag=LU631_RS14645;product=6-phospho-beta-glucosidase;protein_id=WP_016192633.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2750110 2752005 . - . ID=gene-LU631_RS14650;Name=bglF;gbkey=Gene;gene=bglF;gene_biotype=protein_coding;locus_tag=LU631_RS14650;old_locus_tag=LU631_14650 NZ_CP089940.1 Protein Homology CDS 2750110 2752005 . - 0 ID=cds-WP_016192634.1;Parent=gene-LU631_RS14650;Dbxref=Genbank:WP_016192634.1;Name=WP_016192634.1;gbkey=CDS;gene=bglF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811003.1;locus_tag=LU631_RS14650;product=PTS beta-glucoside transporter subunit IIABC;protein_id=WP_016192634.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2752177 2753498 . + . ID=gene-LU631_RS14655;Name=LU631_RS14655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14655;old_locus_tag=LU631_14655;pseudo=true NZ_CP089940.1 Protein Homology CDS 2752177 2753498 . + 0 ID=cds-LU631_RS14655;Parent=gene-LU631_RS14655;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS14655;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2753810 2754850 . + . ID=gene-LU631_RS14660;Name=LU631_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14660;old_locus_tag=LU631_14660 NZ_CP089940.1 Protein Homology CDS 2753810 2754850 . + 0 ID=cds-WP_046371813.1-10;Parent=gene-LU631_RS14660;Dbxref=Genbank:WP_046371813.1;Name=WP_046371813.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS14660;product=IS481 family transposase;protein_id=WP_046371813.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2754968 2755951 . + . ID=gene-LU631_RS14665;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=LU631_RS14665;old_locus_tag=LU631_14665 NZ_CP089940.1 Protein Homology CDS 2754968 2755951 . + 0 ID=cds-WP_046371878.1;Parent=gene-LU631_RS14665;Dbxref=Genbank:WP_046371878.1;Name=WP_046371878.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668029.1;locus_tag=LU631_RS14665;product=zinc transporter ZntB;protein_id=WP_046371878.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2756273 2756860 . - . ID=gene-LU631_RS14670;Name=LU631_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14670;old_locus_tag=LU631_14670 NZ_CP089940.1 Protein Homology CDS 2756273 2756860 . - 0 ID=cds-WP_016192636.1;Parent=gene-LU631_RS14670;Dbxref=Genbank:WP_016192636.1;Name=WP_016192636.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=LU631_RS14670;product=tyrosine-type recombinase/integrase;protein_id=WP_016192636.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2757092 2758312 . + . ID=gene-LU631_RS14675;Name=LU631_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14675;old_locus_tag=LU631_14675 NZ_CP089940.1 Protein Homology CDS 2757092 2758312 . + 0 ID=cds-WP_046371806.1-9;Parent=gene-LU631_RS14675;Dbxref=Genbank:WP_046371806.1;Name=WP_046371806.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025244073.1;locus_tag=LU631_RS14675;product=ISL3 family transposase;protein_id=WP_046371806.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2758507 2759547 . + . ID=gene-LU631_RS14680;Name=LU631_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14680;old_locus_tag=LU631_14680 NZ_CP089940.1 Protein Homology CDS 2758507 2759547 . + 0 ID=cds-WP_046371791.1-11;Parent=gene-LU631_RS14680;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS14680;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2759582 2760088 . - . ID=gene-LU631_RS14685;Name=LU631_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14685;old_locus_tag=LU631_14685 NZ_CP089940.1 Protein Homology CDS 2759582 2760088 . - 0 ID=cds-WP_052734692.1;Parent=gene-LU631_RS14685;Dbxref=Genbank:WP_052734692.1;Name=WP_052734692.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023589.2;locus_tag=LU631_RS14685;product=DUF3596 domain-containing protein;protein_id=WP_052734692.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2760120 2760368 . - . ID=gene-LU631_RS14690;Name=xisR;gbkey=Gene;gene=xisR;gene_biotype=protein_coding;locus_tag=LU631_RS14690;old_locus_tag=LU631_14690 NZ_CP089940.1 Protein Homology CDS 2760120 2760368 . - 0 ID=cds-WP_016192638.1;Parent=gene-LU631_RS14690;Dbxref=Genbank:WP_016192638.1;Name=WP_016192638.1;gbkey=CDS;gene=xisR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816511.1;locus_tag=LU631_RS14690;product=excisionase family protein;protein_id=WP_016192638.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2760660 2763629 . - . ID=gene-LU631_RS14695;Name=LU631_RS14695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14695;old_locus_tag=LU631_14695;pseudo=true NZ_CP089940.1 Protein Homology CDS 2760660 2763629 . - 0 ID=cds-LU631_RS14695;Parent=gene-LU631_RS14695;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016241615.1;locus_tag=LU631_RS14695;product=Tn3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2763797 2764429 . + . ID=gene-LU631_RS14700;Name=LU631_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14700;old_locus_tag=LU631_14700 NZ_CP089940.1 Protein Homology CDS 2763797 2764429 . + 0 ID=cds-WP_016192639.1;Parent=gene-LU631_RS14700;Dbxref=Genbank:WP_016192639.1;Name=WP_016192639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539947.1;locus_tag=LU631_RS14700;product=recombinase family protein;protein_id=WP_016192639.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2764822 2764962 . + . ID=gene-LU631_RS14705;Name=LU631_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14705;old_locus_tag=LU631_14705 NZ_CP089940.1 GeneMarkS-2+ CDS 2764822 2764962 . + 0 ID=cds-WP_161796965.1-13;Parent=gene-LU631_RS14705;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14705;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2764971 2766185 . + . ID=gene-LU631_RS14710;Name=LU631_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14710;old_locus_tag=LU631_14710 NZ_CP089940.1 Protein Homology CDS 2764971 2766185 . + 0 ID=cds-WP_046371879.1-11;Parent=gene-LU631_RS14710;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS14710;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2766486 2767481 . + . ID=gene-LU631_RS14715;Name=LU631_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14715;old_locus_tag=LU631_14715 NZ_CP089940.1 Protein Homology CDS 2766486 2767481 . + 0 ID=cds-WP_046372240.1;Parent=gene-LU631_RS14715;Dbxref=Genbank:WP_046372240.1;Name=WP_046372240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000700205.1;locus_tag=LU631_RS14715;product=alpha/beta hydrolase;protein_id=WP_046372240.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2767552 2768076 . - . ID=gene-LU631_RS14720;Name=LU631_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14720;old_locus_tag=LU631_14720 NZ_CP089940.1 Protein Homology CDS 2767552 2768076 . - 0 ID=cds-WP_016192641.1;Parent=gene-LU631_RS14720;Dbxref=Genbank:WP_016192641.1;Name=WP_016192641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964713.1;locus_tag=LU631_RS14720;product=phenolic acid decarboxylase;protein_id=WP_016192641.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2768568 2769057 . - . ID=gene-LU631_RS14725;Name=LU631_RS14725;end_range=2769057,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14725;old_locus_tag=LU631_14725;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2768568 2769057 . - 0 ID=cds-LU631_RS14725;Parent=gene-LU631_RS14725;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2769057,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU631_RS14725;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2769450 2770346 . + . ID=gene-LU631_RS14730;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=LU631_RS14730;old_locus_tag=LU631_14730 NZ_CP089940.1 Protein Homology CDS 2769450 2770346 . + 0 ID=cds-WP_016192643.1;Parent=gene-LU631_RS14730;Dbxref=Genbank:WP_016192643.1;Name=WP_016192643.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010447933.1;locus_tag=LU631_RS14730;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_016192643.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2770405 2770554 . + . ID=gene-LU631_RS14735;Name=LU631_RS14735;end_range=2770554,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14735;old_locus_tag=LU631_14735;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2770405 2770554 . + 0 ID=cds-LU631_RS14735;Parent=gene-LU631_RS14735;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2770554,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611700.1;locus_tag=LU631_RS14735;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2770551 2770640 . - . ID=gene-LU631_RS14740;Name=LU631_RS14740;end_range=2770640,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14740;old_locus_tag=LU631_14740;partial=true;pseudo=true;start_range=.,2770551 NZ_CP089940.1 Protein Homology CDS 2770551 2770640 . - 0 ID=cds-LU631_RS14740;Parent=gene-LU631_RS14740;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2770640,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS14740;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,2770551;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2770832 2771026 . + . ID=gene-LU631_RS14745;Name=LU631_RS14745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14745;old_locus_tag=LU631_14745;partial=true;pseudo=true;start_range=.,2770832 NZ_CP089940.1 Protein Homology CDS 2770832 2771026 . + 0 ID=cds-LU631_RS14745;Parent=gene-LU631_RS14745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611700.1;locus_tag=LU631_RS14745;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2770832;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2771587 2772628 . + . ID=gene-LU631_RS14750;Name=LU631_RS14750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14750;old_locus_tag=LU631_14750;pseudo=true NZ_CP089940.1 Protein Homology CDS 2771587 2772628 . + 0 ID=cds-LU631_RS14750;Parent=gene-LU631_RS14750;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS14750;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2773068 2773553 . + . ID=gene-LU631_RS14755;Name=LU631_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14755;old_locus_tag=LU631_14755 NZ_CP089940.1 Protein Homology CDS 2773068 2773553 . + 0 ID=cds-WP_046371880.1;Parent=gene-LU631_RS14755;Dbxref=Genbank:WP_046371880.1;Name=WP_046371880.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013068.2;locus_tag=LU631_RS14755;product=transposase;protein_id=WP_046371880.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2773492 2774265 . + . ID=gene-LU631_RS14760;Name=LU631_RS14760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14760;old_locus_tag=LU631_14760;pseudo=true NZ_CP089940.1 Protein Homology CDS 2773492 2774265 . + 0 ID=cds-LU631_RS14760;Parent=gene-LU631_RS14760;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF013068.2;locus_tag=LU631_RS14760;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2774366 2774491 . - . ID=gene-LU631_RS14765;Name=LU631_RS14765;end_range=2774491,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14765;old_locus_tag=LU631_14765;partial=true;pseudo=true;start_range=.,2774366 NZ_CP089940.1 Protein Homology CDS 2774366 2774491 . - 0 ID=cds-LU631_RS14765;Parent=gene-LU631_RS14765;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2774491,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011920327.1;locus_tag=LU631_RS14765;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,2774366;transl_table=11 NZ_CP089940.1 RefSeq gene 2774482 2775000 . - . ID=gene-LU631_RS14770;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=LU631_RS14770;old_locus_tag=LU631_14770 NZ_CP089940.1 Protein Homology CDS 2774482 2775000 . - 0 ID=cds-WP_046371883.1;Parent=gene-LU631_RS14770;Dbxref=Genbank:WP_046371883.1;Name=WP_046371883.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003850273.1;locus_tag=LU631_RS14770;product=superoxide dismutase family protein;protein_id=WP_046371883.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2775074 2775265 . - . ID=gene-LU631_RS14775;Name=LU631_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14775;old_locus_tag=LU631_14775 NZ_CP089940.1 GeneMarkS-2+ CDS 2775074 2775265 . - 0 ID=cds-WP_046371884.1;Parent=gene-LU631_RS14775;Dbxref=Genbank:WP_046371884.1;Name=WP_046371884.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14775;product=hypothetical protein;protein_id=WP_046371884.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2775561 2776031 . + . ID=gene-LU631_RS14780;Name=LU631_RS14780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14780;old_locus_tag=LU631_14780;partial=true;pseudo=true;start_range=.,2775561 NZ_CP089940.1 Protein Homology CDS 2775561 2776031 . + 0 ID=cds-LU631_RS14780;Parent=gene-LU631_RS14780;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001388363.1;locus_tag=LU631_RS14780;partial=true;product=type II secretion system protein GspD;pseudo=true;start_range=.,2775561;transl_table=11 NZ_CP089940.1 RefSeq gene 2776372 2777046 . + . ID=gene-LU631_RS14785;Name=LU631_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14785;old_locus_tag=LU631_14785 NZ_CP089940.1 Protein Homology CDS 2776372 2777046 . + 0 ID=cds-WP_233481916.1;Parent=gene-LU631_RS14785;Dbxref=Genbank:WP_233481916.1;Name=WP_233481916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358146.1;locus_tag=LU631_RS14785;product=hypothetical protein;protein_id=WP_233481916.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2777055 2777483 . + . ID=gene-LU631_RS14790;Name=LU631_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14790;old_locus_tag=LU631_14790 NZ_CP089940.1 GeneMarkS-2+ CDS 2777055 2777483 . + 0 ID=cds-WP_046371885.1;Parent=gene-LU631_RS14790;Dbxref=Genbank:WP_046371885.1;Name=WP_046371885.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14790;product=hypothetical protein;protein_id=WP_046371885.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2777541 2778661 . - . ID=gene-LU631_RS14795;Name=LU631_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14795;old_locus_tag=LU631_14795 NZ_CP089940.1 Protein Homology CDS 2778403 2778661 . - 0 ID=cds-WP_152664159.1;Parent=gene-LU631_RS14795;Dbxref=Genbank:WP_152664159.1;Name=WP_152664159.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS14795;product=IS3 family transposase;protein_id=WP_152664159.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 2777541 2778403 . - 2 ID=cds-WP_152664159.1;Parent=gene-LU631_RS14795;Dbxref=Genbank:WP_152664159.1;Name=WP_152664159.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS14795;product=IS3 family transposase;protein_id=WP_152664159.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2779145 2780185 . - . ID=gene-LU631_RS14800;Name=LU631_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14800;old_locus_tag=LU631_14800 NZ_CP089940.1 Protein Homology CDS 2779145 2780185 . - 0 ID=cds-WP_046371813.1-11;Parent=gene-LU631_RS14800;Dbxref=Genbank:WP_046371813.1;Name=WP_046371813.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS14800;product=IS481 family transposase;protein_id=WP_046371813.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2780398 2780622 . - . ID=gene-LU631_RS14805;Name=LU631_RS14805;end_range=2780622,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14805;old_locus_tag=LU631_14805;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2780398 2780622 . - 0 ID=cds-LU631_RS14805;Parent=gene-LU631_RS14805;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2780622,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003965506.1;locus_tag=LU631_RS14805;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2780726 2781766 . + . ID=gene-LU631_RS14810;Name=LU631_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14810;old_locus_tag=LU631_14810 NZ_CP089940.1 Protein Homology CDS 2780726 2781766 . + 0 ID=cds-WP_046371887.1;Parent=gene-LU631_RS14810;Dbxref=Genbank:WP_046371887.1;Name=WP_046371887.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS14810;product=IS481 family transposase;protein_id=WP_046371887.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2781970 2782359 . - . ID=gene-LU631_RS14815;Name=LU631_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14815;old_locus_tag=LU631_14815 NZ_CP089940.1 Protein Homology CDS 2781970 2782359 . - 0 ID=cds-WP_016169680.1;Parent=gene-LU631_RS14815;Dbxref=Genbank:WP_016169680.1;Name=WP_016169680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441353.1;locus_tag=LU631_RS14815;product=hypothetical protein;protein_id=WP_016169680.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2782447 2782899 . - . ID=gene-LU631_RS14820;Name=LU631_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14820;old_locus_tag=LU631_14820 NZ_CP089940.1 Protein Homology CDS 2782447 2782899 . - 0 ID=cds-WP_016169681.1;Parent=gene-LU631_RS14820;Dbxref=Genbank:WP_016169681.1;Name=WP_016169681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169681.1;locus_tag=LU631_RS14820;product=hypothetical protein;protein_id=WP_016169681.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2783067 2784118 . + . ID=gene-LU631_RS14825;Name=LU631_RS14825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14825;old_locus_tag=LU631_14825;pseudo=true NZ_CP089940.1 Protein Homology CDS 2783067 2784118 . + 0 ID=cds-LU631_RS14825;Parent=gene-LU631_RS14825;Note=frameshifted;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568107.1;locus_tag=LU631_RS14825;product=phage/plasmid replication protein%2C II/X family;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2784202 2784330 . + . ID=gene-LU631_RS26085;Name=LU631_RS26085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26085 NZ_CP089940.1 GeneMarkS-2+ CDS 2784202 2784330 . + 0 ID=cds-WP_267921496.1;Parent=gene-LU631_RS26085;Dbxref=Genbank:WP_267921496.1;Name=WP_267921496.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS26085;product=hypothetical protein;protein_id=WP_267921496.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2784474 2785799 . - . ID=gene-LU631_RS14830;Name=LU631_RS14830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14830;old_locus_tag=LU631_14830;pseudo=true NZ_CP089940.1 Protein Homology CDS 2784474 2785799 . - 0 ID=cds-LU631_RS14830;Parent=gene-LU631_RS14830;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS14830;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2785977 2786627 . + . ID=gene-LU631_RS14835;Name=LU631_RS14835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14835;old_locus_tag=LU631_14835;pseudo=true NZ_CP089940.1 Protein Homology CDS 2785977 2786627 . + 0 ID=cds-LU631_RS14835;Parent=gene-LU631_RS14835;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS14835;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2786620 2787639 . - . ID=gene-LU631_RS14840;Name=LU631_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14840;old_locus_tag=LU631_14840 NZ_CP089940.1 Protein Homology CDS 2786620 2787639 . - 0 ID=cds-WP_016169679.1;Parent=gene-LU631_RS14840;Dbxref=Genbank:WP_016169679.1;Name=WP_016169679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157579.1;locus_tag=LU631_RS14840;product=AI-2E family transporter;protein_id=WP_016169679.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2787771 2787962 . - . ID=gene-LU631_RS14845;Name=LU631_RS14845;end_range=2787962,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14845;old_locus_tag=LU631_14845;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2787771 2787962 . - 0 ID=cds-LU631_RS14845;Parent=gene-LU631_RS14845;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2787962,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157581.1;locus_tag=LU631_RS14845;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2788135 2789175 . + . ID=gene-LU631_RS14850;Name=LU631_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14850;old_locus_tag=LU631_14850 NZ_CP089940.1 Protein Homology CDS 2788135 2789175 . + 0 ID=cds-WP_046371791.1-12;Parent=gene-LU631_RS14850;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS14850;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2789238 2789366 . + . ID=gene-LU631_RS26090;Name=LU631_RS26090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26090 NZ_CP089940.1 GeneMarkS-2+ CDS 2789238 2789366 . + 0 ID=cds-WP_016169682.1;Parent=gene-LU631_RS26090;Dbxref=Genbank:WP_016169682.1;Name=WP_016169682.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS26090;product=hypothetical protein;protein_id=WP_016169682.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2789463 2790251 . - . ID=gene-LU631_RS14855;Name=LU631_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14855;old_locus_tag=LU631_14855 NZ_CP089940.1 Protein Homology CDS 2789463 2790251 . - 0 ID=cds-WP_016169683.1;Parent=gene-LU631_RS14855;Dbxref=Genbank:WP_016169683.1;Name=WP_016169683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014605103.1;locus_tag=LU631_RS14855;product=siderophore-interacting protein;protein_id=WP_016169683.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2790639 2792411 . + . ID=gene-LU631_RS14860;Name=LU631_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14860;old_locus_tag=LU631_14860 NZ_CP089940.1 GeneMarkS-2+ CDS 2790639 2792411 . + 0 ID=cds-WP_016169684.1;Parent=gene-LU631_RS14860;Dbxref=Genbank:WP_016169684.1;Name=WP_016169684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14860;product=exopolysaccharide biosynthesis protein;protein_id=WP_016169684.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2792526 2792675 . + . ID=gene-LU631_RS14865;Name=LU631_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14865;old_locus_tag=LU631_14865 NZ_CP089940.1 GeneMarkS-2+ CDS 2792526 2792675 . + 0 ID=cds-WP_157275199.1;Parent=gene-LU631_RS14865;Dbxref=Genbank:WP_157275199.1;Name=WP_157275199.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14865;product=hypothetical protein;protein_id=WP_157275199.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2792864 2793046 . - . ID=gene-LU631_RS14870;Name=LU631_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14870;old_locus_tag=LU631_14870 NZ_CP089940.1 Protein Homology CDS 2792864 2793046 . - 0 ID=cds-WP_233481917.1;Parent=gene-LU631_RS14870;Dbxref=Genbank:WP_233481917.1;Name=WP_233481917.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.2;locus_tag=LU631_RS14870;product=transposase;protein_id=WP_233481917.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2793326 2794133 . + . ID=gene-LU631_RS14875;Name=LU631_RS14875;end_range=2794133,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14875;old_locus_tag=LU631_14875;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2793326 2794133 . + 0 ID=cds-LU631_RS14875;Parent=gene-LU631_RS14875;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2794133,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS14875;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2794192 2795233 . - . ID=gene-LU631_RS14880;Name=LU631_RS14880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14880;old_locus_tag=LU631_14880;pseudo=true NZ_CP089940.1 Protein Homology CDS 2794192 2795233 . - 0 ID=cds-LU631_RS14880;Parent=gene-LU631_RS14880;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS14880;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2795347 2795520 . - . ID=gene-LU631_RS14885;Name=LU631_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14885;old_locus_tag=LU631_14885 NZ_CP089940.1 GeneMarkS-2+ CDS 2795347 2795520 . - 0 ID=cds-WP_157275200.1;Parent=gene-LU631_RS14885;Dbxref=Genbank:WP_157275200.1;Name=WP_157275200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14885;product=hypothetical protein;protein_id=WP_157275200.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2795517 2795774 . - . ID=gene-LU631_RS14890;Name=LU631_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14890;old_locus_tag=LU631_14890 NZ_CP089940.1 GeneMarkS-2+ CDS 2795517 2795774 . - 0 ID=cds-WP_051124315.1;Parent=gene-LU631_RS14890;Dbxref=Genbank:WP_051124315.1;Name=WP_051124315.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14890;product=hypothetical protein;protein_id=WP_051124315.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2795884 2796480 . - . ID=gene-LU631_RS14895;Name=LU631_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14895;old_locus_tag=LU631_14895 NZ_CP089940.1 GeneMarkS-2+ CDS 2795884 2796480 . - 0 ID=cds-WP_046371890.1;Parent=gene-LU631_RS14895;Dbxref=Genbank:WP_046371890.1;Name=WP_046371890.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14895;product=hypothetical protein;protein_id=WP_046371890.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2796682 2797017 . - . ID=gene-LU631_RS14900;Name=LU631_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14900;old_locus_tag=LU631_14900 NZ_CP089940.1 GeneMarkS-2+ CDS 2796682 2797017 . - 0 ID=cds-WP_016169688.1;Parent=gene-LU631_RS14900;Dbxref=Genbank:WP_016169688.1;Name=WP_016169688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14900;product=hypothetical protein;protein_id=WP_016169688.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2797506 2798165 . + . ID=gene-LU631_RS14905;Name=LU631_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14905;old_locus_tag=LU631_14905 NZ_CP089940.1 Protein Homology CDS 2797506 2798165 . + 0 ID=cds-WP_016169689.1;Parent=gene-LU631_RS14905;Dbxref=Genbank:WP_016169689.1;Name=WP_016169689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242528.1;locus_tag=LU631_RS14905;product=class I SAM-dependent methyltransferase;protein_id=WP_016169689.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2798232 2798666 . + . ID=gene-LU631_RS14910;Name=LU631_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14910;old_locus_tag=LU631_14910 NZ_CP089940.1 Protein Homology CDS 2798232 2798666 . + 0 ID=cds-WP_016169690.1;Parent=gene-LU631_RS14910;Dbxref=Genbank:WP_016169690.1;Name=WP_016169690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014605776.1;locus_tag=LU631_RS14910;product=DoxX family protein;protein_id=WP_016169690.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2798758 2800083 . - . ID=gene-LU631_RS14915;Name=LU631_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14915;old_locus_tag=LU631_14915 NZ_CP089940.1 Protein Homology CDS 2798758 2800083 . - 0 ID=cds-WP_016169691.1;Parent=gene-LU631_RS14915;Dbxref=Genbank:WP_016169691.1;Name=WP_016169691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202036.1;locus_tag=LU631_RS14915;product=aromatic acid/H+ symport family MFS transporter;protein_id=WP_016169691.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2800563 2800802 . - . ID=gene-LU631_RS14920;Name=LU631_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14920;old_locus_tag=LU631_14920 NZ_CP089940.1 GeneMarkS-2+ CDS 2800563 2800802 . - 0 ID=cds-WP_016169693.1;Parent=gene-LU631_RS14920;Dbxref=Genbank:WP_016169693.1;Name=WP_016169693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14920;product=hypothetical protein;protein_id=WP_016169693.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2800945 2801805 . - . ID=gene-LU631_RS14925;Name=LU631_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14925;old_locus_tag=LU631_14925 NZ_CP089940.1 Protein Homology CDS 2800945 2801805 . - 0 ID=cds-WP_016169694.1;Parent=gene-LU631_RS14925;Dbxref=Genbank:WP_016169694.1;Name=WP_016169694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001483142.1;locus_tag=LU631_RS14925;product=alpha/beta hydrolase;protein_id=WP_016169694.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2801923 2803401 . - . ID=gene-LU631_RS14930;Name=LU631_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14930;old_locus_tag=LU631_14930 NZ_CP089940.1 Protein Homology CDS 2801923 2803401 . - 0 ID=cds-WP_016169695.1;Parent=gene-LU631_RS14930;Dbxref=Genbank:WP_016169695.1;Name=WP_016169695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001355308.1;locus_tag=LU631_RS14930;product=PhoPQ-activated protein PqaA family protein;protein_id=WP_016169695.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2803545 2804585 . + . ID=gene-LU631_RS14935;Name=LU631_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14935;old_locus_tag=LU631_14935 NZ_CP089940.1 Protein Homology CDS 2803545 2804585 . + 0 ID=cds-WP_046371813.1-12;Parent=gene-LU631_RS14935;Dbxref=Genbank:WP_046371813.1;Name=WP_046371813.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS14935;product=IS481 family transposase;protein_id=WP_046371813.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2804656 2805255 . - . ID=gene-LU631_RS14940;Name=LU631_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14940;old_locus_tag=LU631_14940 NZ_CP089940.1 Protein Homology CDS 2804656 2805255 . - 0 ID=cds-WP_016169696.1;Parent=gene-LU631_RS14940;Dbxref=Genbank:WP_016169696.1;Name=WP_016169696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572335.1;locus_tag=LU631_RS14940;product=recombinase family protein;protein_id=WP_016169696.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2805334 2805984 . - . ID=gene-LU631_RS14945;Name=LU631_RS14945;end_range=2805984,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14945;old_locus_tag=LU631_14945;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2805334 2805984 . - 0 ID=cds-LU631_RS14945;Parent=gene-LU631_RS14945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=2805984,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606384.1;locus_tag=LU631_RS14945;partial=true;product=Tn3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2806179 2806514 . + . ID=gene-LU631_RS14950;Name=LU631_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14950;old_locus_tag=LU631_14950 NZ_CP089940.1 GeneMarkS-2+ CDS 2806179 2806514 . + 0 ID=cds-WP_052734695.1-7;Parent=gene-LU631_RS14950;Dbxref=Genbank:WP_052734695.1;Name=WP_052734695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS14950;product=hypothetical protein;protein_id=WP_052734695.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2806523 2807293 . + . ID=gene-LU631_RS26095;Name=LU631_RS26095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26095 NZ_CP089940.1 Protein Homology CDS 2806523 2807293 . + 0 ID=cds-WP_267921497.1-5;Parent=gene-LU631_RS26095;Dbxref=Genbank:WP_267921497.1;Name=WP_267921497.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26095;product=transposase zinc-binding domain-containing protein;protein_id=WP_267921497.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2807305 2807748 . + . ID=gene-LU631_RS26100;Name=LU631_RS26100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26100 NZ_CP089940.1 Protein Homology CDS 2807305 2807748 . + 0 ID=cds-WP_267921498.1;Parent=gene-LU631_RS26100;Dbxref=Genbank:WP_267921498.1;Name=WP_267921498.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26100;product=transposase;protein_id=WP_267921498.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2808155 2808910 . + . ID=gene-LU631_RS14960;Name=LU631_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14960;old_locus_tag=LU631_14960 NZ_CP089940.1 Protein Homology CDS 2808155 2808910 . + 0 ID=cds-WP_016169698.1;Parent=gene-LU631_RS14960;Dbxref=Genbank:WP_016169698.1;Name=WP_016169698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=LU631_RS14960;product=FNR family transcription factor;protein_id=WP_016169698.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2809291 2810238 . + . ID=gene-LU631_RS14965;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=LU631_RS14965;old_locus_tag=LU631_14965 NZ_CP089940.1 Protein Homology CDS 2809291 2810238 . + 0 ID=cds-WP_016169699.1;Parent=gene-LU631_RS14965;Dbxref=Genbank:WP_016169699.1;Name=WP_016169699.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010618443.1;locus_tag=LU631_RS14965;product=universal stress protein UspE;protein_id=WP_016169699.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2810344 2811732 . - . ID=gene-LU631_RS14970;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=LU631_RS14970;old_locus_tag=LU631_14970 NZ_CP089940.1 Protein Homology CDS 2810344 2811732 . - 0 ID=cds-WP_016169700.1;Parent=gene-LU631_RS14970;Dbxref=Genbank:WP_016169700.1;Name=WP_016169700.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226734.1;locus_tag=LU631_RS14970;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_016169700.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2811743 2813275 . - . ID=gene-LU631_RS14975;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=LU631_RS14975;old_locus_tag=LU631_14975 NZ_CP089940.1 Protein Homology CDS 2811743 2813275 . - 0 ID=cds-WP_016169701.1;Parent=gene-LU631_RS14975;Dbxref=Genbank:WP_016169701.1;Name=WP_016169701.1;Ontology_term=GO:0008750;gbkey=CDS;gene=pntA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010670207.1;locus_tag=LU631_RS14975;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_016169701.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2813504 2814271 . - . ID=gene-LU631_RS14980;Name=LU631_RS14980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS14980;old_locus_tag=LU631_14980;pseudo=true NZ_CP089940.1 Protein Homology CDS 2813504 2814271 . - 0 ID=cds-LU631_RS14980;Parent=gene-LU631_RS14980;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS14980;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2814592 2815545 . + . ID=gene-LU631_RS14985;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=LU631_RS14985;old_locus_tag=LU631_14985 NZ_CP089940.1 Protein Homology CDS 2814592 2815545 . + 0 ID=cds-WP_016169704.1;Parent=gene-LU631_RS14985;Dbxref=Genbank:WP_016169704.1;Name=WP_016169704.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169828.1;locus_tag=LU631_RS14985;product=DUF1471 family protein YdgH;protein_id=WP_016169704.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2815760 2816173 . - . ID=gene-LU631_RS14990;Name=LU631_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS14990;old_locus_tag=LU631_14990 NZ_CP089940.1 Protein Homology CDS 2815760 2816173 . - 0 ID=cds-WP_016169705.1;Parent=gene-LU631_RS14990;Dbxref=Genbank:WP_016169705.1;Name=WP_016169705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544310.1;locus_tag=LU631_RS14990;product=hypothetical protein;protein_id=WP_016169705.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2816351 2817079 . + . ID=gene-LU631_RS14995;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=LU631_RS14995;old_locus_tag=LU631_14995 NZ_CP089940.1 Protein Homology CDS 2816351 2817079 . + 0 ID=cds-WP_016169706.1;Parent=gene-LU631_RS14995;Dbxref=Genbank:WP_016169706.1;Name=WP_016169706.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202020.1;locus_tag=LU631_RS14995;product=two-component system response regulator RstA;protein_id=WP_016169706.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2817076 2818374 . + . ID=gene-LU631_RS15000;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=LU631_RS15000;old_locus_tag=LU631_15000 NZ_CP089940.1 Protein Homology CDS 2817076 2818374 . + 0 ID=cds-WP_016169707.1;Parent=gene-LU631_RS15000;Dbxref=Genbank:WP_016169707.1;Name=WP_016169707.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025877.1;locus_tag=LU631_RS15000;product=two-component system sensor histidine kinase RstB;protein_id=WP_016169707.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2818402 2819892 . + . ID=gene-LU631_RS15005;Name=LU631_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15005;old_locus_tag=LU631_15005 NZ_CP089940.1 Protein Homology CDS 2818402 2819892 . + 0 ID=cds-WP_016169708.1;Parent=gene-LU631_RS15005;Dbxref=Genbank:WP_016169708.1;Name=WP_016169708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003853744.1;locus_tag=LU631_RS15005;product=carboxypeptidase M32;protein_id=WP_016169708.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2820080 2820367 . + . ID=gene-LU631_RS15010;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=LU631_RS15010;old_locus_tag=LU631_15010 NZ_CP089940.1 Protein Homology CDS 2820080 2820367 . + 0 ID=cds-WP_016169709.1;Parent=gene-LU631_RS15010;Dbxref=Genbank:WP_016169709.1;Name=WP_016169709.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004959410.1;locus_tag=LU631_RS15010;product=acid resistance repetitive basic protein Asr;protein_id=WP_016169709.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2820647 2821462 . + . ID=gene-LU631_RS15015;Name=LU631_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15015;old_locus_tag=LU631_15015 NZ_CP089940.1 Protein Homology CDS 2820647 2821462 . + 0 ID=cds-WP_016169710.1;Parent=gene-LU631_RS15015;Dbxref=Genbank:WP_016169710.1;Name=WP_016169710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202016.1;locus_tag=LU631_RS15015;product=serine protease;protein_id=WP_016169710.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2821740 2821898 . - . ID=gene-LU631_RS15020;Name=LU631_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15020;old_locus_tag=LU631_15020 NZ_CP089940.1 Protein Homology CDS 2821740 2821898 . - 0 ID=cds-WP_016169711.1;Parent=gene-LU631_RS15020;Dbxref=Genbank:WP_016169711.1;Name=WP_016169711.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013676.2;locus_tag=LU631_RS15020;product=Tn3 family transposase;protein_id=WP_016169711.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2822011 2822406 . - . ID=gene-LU631_RS15025;Name=LU631_RS15025;end_range=2822406,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15025;old_locus_tag=LU631_15025;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2822011 2822406 . - 0 ID=cds-LU631_RS15025;Parent=gene-LU631_RS15025;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2822406,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU631_RS15025;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2822389 2822511 . - . ID=gene-LU631_RS15030;Name=LU631_RS15030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15030;old_locus_tag=LU631_15030;partial=true;pseudo=true;start_range=.,2822389 NZ_CP089940.1 Protein Homology CDS 2822389 2822511 . - 0 ID=cds-LU631_RS15030;Parent=gene-LU631_RS15030;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858395.1;locus_tag=LU631_RS15030;partial=true;product=IS91 family transposase;pseudo=true;start_range=.,2822389;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2822535 2822708 . - . ID=gene-LU631_RS15035;Name=LU631_RS15035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15035;old_locus_tag=LU631_15035;partial=true;pseudo=true;start_range=.,2822535 NZ_CP089940.1 Protein Homology CDS 2822535 2822708 . - 0 ID=cds-LU631_RS15035;Parent=gene-LU631_RS15035;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707455.1;locus_tag=LU631_RS15035;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2822535;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2822812 2823836 . - . ID=gene-LU631_RS15040;Name=LU631_RS15040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15040;old_locus_tag=LU631_15040;pseudo=true NZ_CP089940.1 Protein Homology CDS 2822812 2823836 . - 0 ID=cds-LU631_RS15040;Parent=gene-LU631_RS15040;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011073373.1;locus_tag=LU631_RS15040;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2824041 2824370 . - . ID=gene-LU631_RS15045;Name=LU631_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15045;old_locus_tag=LU631_15045 NZ_CP089940.1 Protein Homology CDS 2824041 2824370 . - 0 ID=cds-WP_016169715.1;Parent=gene-LU631_RS15045;Dbxref=Genbank:WP_016169715.1;Name=WP_016169715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202308.1;locus_tag=LU631_RS15045;product=hypothetical protein;protein_id=WP_016169715.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2824476 2826089 . - . ID=gene-LU631_RS15050;Name=LU631_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15050;old_locus_tag=LU631_15050 NZ_CP089940.1 Protein Homology CDS 2824476 2826089 . - 0 ID=cds-WP_040465247.1;Parent=gene-LU631_RS15050;Dbxref=Genbank:WP_040465247.1;Name=WP_040465247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169857.1;locus_tag=LU631_RS15050;product=peptide ABC transporter substrate-binding protein;protein_id=WP_040465247.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2826362 2827080 . + . ID=gene-LU631_RS15055;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=pseudogene;locus_tag=LU631_RS15055;old_locus_tag=LU631_15055;pseudo=true NZ_CP089940.1 Protein Homology CDS 2826362 2827080 . + 0 ID=cds-LU631_RS15055;Parent=gene-LU631_RS15055;Note=frameshifted%3B internal stop;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014832119.1;locus_tag=LU631_RS15055;product=murein tripeptide amidase MpaA;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2827051 2827465 . - . ID=gene-LU631_RS15060;Name=LU631_RS15060;end_range=2827465,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15060;old_locus_tag=LU631_15060;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2827051 2827465 . - 0 ID=cds-LU631_RS15060;Parent=gene-LU631_RS15060;Note=catalyzes the epimerization of L-alanyl-D-glutamate to L-alanyl-L-glutamate%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2827465,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157692.1;locus_tag=LU631_RS15060;partial=true;product=L-Ala-D/L-Glu epimerase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2827460 2827579 . + . ID=gene-LU631_RS15065;Name=LU631_RS15065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15065;old_locus_tag=LU631_15065;partial=true;pseudo=true;start_range=.,2827460 NZ_CP089940.1 Protein Homology CDS 2827460 2827579 . + 0 ID=cds-LU631_RS15065;Parent=gene-LU631_RS15065;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850226.1;locus_tag=LU631_RS15065;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2827460;transl_table=11 NZ_CP089940.1 RefSeq gene 2827629 2829203 . - . ID=gene-LU631_RS15070;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=LU631_RS15070;old_locus_tag=LU631_15070 NZ_CP089940.1 Protein Homology CDS 2827629 2829203 . - 0 ID=cds-WP_016169721.1;Parent=gene-LU631_RS15070;Dbxref=Genbank:WP_016169721.1;Name=WP_016169721.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157694.1;locus_tag=LU631_RS15070;product=transcriptional regulator TyrR;protein_id=WP_016169721.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2829296 2830336 . - . ID=gene-LU631_RS15075;Name=LU631_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15075;old_locus_tag=LU631_15075 NZ_CP089940.1 Protein Homology CDS 2829296 2830336 . - 0 ID=cds-WP_016169722.1;Parent=gene-LU631_RS15075;Dbxref=Genbank:WP_016169722.1;Name=WP_016169722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229030.1;locus_tag=LU631_RS15075;product=TIGR01620 family protein;protein_id=WP_016169722.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2830333 2831730 . - . ID=gene-LU631_RS15080;Name=LU631_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15080;old_locus_tag=LU631_15080 NZ_CP089940.1 Protein Homology CDS 2830333 2831730 . - 0 ID=cds-WP_016169723.1;Parent=gene-LU631_RS15080;Dbxref=Genbank:WP_016169723.1;Name=WP_016169723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=LU631_RS15080;product=YcjX family protein;protein_id=WP_016169723.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2831791 2832015 . - . ID=gene-LU631_RS15085;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=LU631_RS15085;old_locus_tag=LU631_15085 NZ_CP089940.1 Protein Homology CDS 2831791 2832015 . - 0 ID=cds-WP_016169724.1;Parent=gene-LU631_RS15085;Dbxref=Genbank:WP_016169724.1;Name=WP_016169724.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202322.1;locus_tag=LU631_RS15085;product=phage shock protein PspD;protein_id=WP_016169724.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2832061 2832414 . - . ID=gene-LU631_RS15090;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=LU631_RS15090;old_locus_tag=LU631_15090 NZ_CP089940.1 Protein Homology CDS 2832061 2832414 . - 0 ID=cds-WP_016169725.1;Parent=gene-LU631_RS15090;Dbxref=Genbank:WP_016169725.1;Name=WP_016169725.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025902.1;locus_tag=LU631_RS15090;product=envelope stress response membrane protein PspC;protein_id=WP_016169725.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2832411 2832638 . - . ID=gene-LU631_RS15095;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=LU631_RS15095;old_locus_tag=LU631_15095 NZ_CP089940.1 Protein Homology CDS 2832411 2832638 . - 0 ID=cds-WP_016169726.1;Parent=gene-LU631_RS15095;Dbxref=Genbank:WP_016169726.1;Name=WP_016169726.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=LU631_RS15095;product=envelope stress response membrane protein PspB;protein_id=WP_016169726.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2832680 2833345 . - . ID=gene-LU631_RS15100;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=LU631_RS15100;old_locus_tag=LU631_15100 NZ_CP089940.1 Protein Homology CDS 2832680 2833345 . - 0 ID=cds-WP_016169727.1;Parent=gene-LU631_RS15100;Dbxref=Genbank:WP_016169727.1;Name=WP_016169727.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357983.1;locus_tag=LU631_RS15100;product=phage shock protein PspA;protein_id=WP_016169727.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2833510 2834511 . + . ID=gene-LU631_RS15105;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=LU631_RS15105;old_locus_tag=LU631_15105 NZ_CP089940.1 Protein Homology CDS 2833510 2834511 . + 0 ID=cds-WP_016169728.1;Parent=gene-LU631_RS15105;Dbxref=Genbank:WP_016169728.1;Name=WP_016169728.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378012.1;locus_tag=LU631_RS15105;product=phage shock protein operon transcriptional activator;protein_id=WP_016169728.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2835091 2836695 . + . ID=gene-LU631_RS15110;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=LU631_RS15110;old_locus_tag=LU631_15110 NZ_CP089940.1 Protein Homology CDS 2835091 2836695 . + 0 ID=cds-WP_232426818.1;Parent=gene-LU631_RS15110;Dbxref=Genbank:WP_232426818.1;Name=WP_232426818.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=sapA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169866.1;locus_tag=LU631_RS15110;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_232426818.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2836689 2837654 . + . ID=gene-LU631_RS15115;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=LU631_RS15115;old_locus_tag=LU631_15115 NZ_CP089940.1 Protein Homology CDS 2836689 2837654 . + 0 ID=cds-WP_016169730.1;Parent=gene-LU631_RS15115;Dbxref=Genbank:WP_016169730.1;Name=WP_016169730.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000583298.1;locus_tag=LU631_RS15115;product=putrescine ABC transporter permease SapB;protein_id=WP_016169730.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2837841 2838355 . + . ID=gene-LU631_RS15120;Name=LU631_RS15120;end_range=2838355,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15120;old_locus_tag=LU631_15120;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2837841 2838355 . + 0 ID=cds-LU631_RS15120;Parent=gene-LU631_RS15120;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2838355,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU631_RS15120;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2838511 2838942 . - . ID=gene-LU631_RS26105;Name=LU631_RS26105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26105 NZ_CP089940.1 Protein Homology CDS 2838511 2838942 . - 0 ID=cds-WP_267958435.1;Parent=gene-LU631_RS26105;Dbxref=Genbank:WP_267958435.1;Name=WP_267958435.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26105;product=transposase;protein_id=WP_267958435.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2838954 2839724 . - . ID=gene-LU631_RS26110;Name=LU631_RS26110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26110 NZ_CP089940.1 Protein Homology CDS 2838954 2839724 . - 0 ID=cds-WP_267958436.1;Parent=gene-LU631_RS26110;Dbxref=Genbank:WP_267958436.1;Name=WP_267958436.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26110;product=transposase zinc-binding domain-containing protein;protein_id=WP_267958436.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2839733 2840068 . - . ID=gene-LU631_RS15130;Name=LU631_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15130;old_locus_tag=LU631_15130 NZ_CP089940.1 GeneMarkS-2+ CDS 2839733 2840068 . - 0 ID=cds-WP_052734695.1-8;Parent=gene-LU631_RS15130;Dbxref=Genbank:WP_052734695.1;Name=WP_052734695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS15130;product=hypothetical protein;protein_id=WP_052734695.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2840283 2840369 . + . ID=gene-LU631_RS15135;Name=LU631_RS15135;end_range=2840369,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15135;old_locus_tag=LU631_15135;partial=true;pseudo=true;start_range=.,2840283 NZ_CP089940.1 Protein Homology CDS 2840283 2840369 . + 0 ID=cds-LU631_RS15135;Parent=gene-LU631_RS15135;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2840369,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU631_RS15135;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,2840283;transl_table=11 NZ_CP089940.1 RefSeq gene 2840436 2841556 . + . ID=gene-LU631_RS15140;Name=LU631_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15140;old_locus_tag=LU631_15140 NZ_CP089940.1 Protein Homology CDS 2840436 2840694 . + 0 ID=cds-WP_152664161.1-2;Parent=gene-LU631_RS15140;Dbxref=Genbank:WP_152664161.1;Name=WP_152664161.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS15140;product=IS3 family transposase;protein_id=WP_152664161.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 2840694 2841556 . + 2 ID=cds-WP_152664161.1-2;Parent=gene-LU631_RS15140;Dbxref=Genbank:WP_152664161.1;Name=WP_152664161.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS15140;product=IS3 family transposase;protein_id=WP_152664161.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2842063 2842251 . + . ID=gene-LU631_RS15145;Name=LU631_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15145;old_locus_tag=LU631_15145 NZ_CP089940.1 GeneMarkS-2+ CDS 2842063 2842251 . + 0 ID=cds-WP_152664162.1;Parent=gene-LU631_RS15145;Dbxref=Genbank:WP_152664162.1;Name=WP_152664162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS15145;product=hypothetical protein;protein_id=WP_152664162.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2842399 2842809 . + . ID=gene-LU631_RS15150;Name=LU631_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15150;old_locus_tag=LU631_15150 NZ_CP089940.1 GeneMarkS-2+ CDS 2842399 2842809 . + 0 ID=cds-WP_016169732.1;Parent=gene-LU631_RS15150;Dbxref=Genbank:WP_016169732.1;Name=WP_016169732.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS15150;product=hypothetical protein;protein_id=WP_016169732.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2842841 2843254 . + . ID=gene-LU631_RS15155;Name=LU631_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15155;old_locus_tag=LU631_15155 NZ_CP089940.1 GeneMarkS-2+ CDS 2842841 2843254 . + 0 ID=cds-WP_040465248.1;Parent=gene-LU631_RS15155;Dbxref=Genbank:WP_040465248.1;Name=WP_040465248.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS15155;product=carbohydrate binding domain-containing protein;protein_id=WP_040465248.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2843377 2843913 . - . ID=gene-LU631_RS15160;Name=LU631_RS15160;end_range=2843913,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15160;old_locus_tag=LU631_15160;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2843377 2843913 . - 0 ID=cds-LU631_RS15160;Parent=gene-LU631_RS15160;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2843913,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=LU631_RS15160;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2844110 2844814 . - . ID=gene-LU631_RS15165;Name=LU631_RS15165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15165;old_locus_tag=LU631_15165;pseudo=true NZ_CP089940.1 Protein Homology CDS 2844110 2844814 . - 0 ID=cds-LU631_RS15165;Parent=gene-LU631_RS15165;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001389365.1;locus_tag=LU631_RS15165;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2845050 2845292 . + . ID=gene-LU631_RS15170;Name=LU631_RS15170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15170;old_locus_tag=LU631_15170;partial=true;pseudo=true;start_range=.,2845050 NZ_CP089940.1 Protein Homology CDS 2845050 2845292 . + 0 ID=cds-LU631_RS15170;Parent=gene-LU631_RS15170;Note=fermentative%3B catalyzes the formationof pyruvate from lactate%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210998.1;locus_tag=LU631_RS15170;partial=true;product=2-hydroxyacid dehydrogenase;pseudo=true;start_range=.,2845050;transl_table=11 NZ_CP089940.1 RefSeq gene 2845335 2845607 . - . ID=gene-LU631_RS15175;Name=LU631_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15175;old_locus_tag=LU631_15175 NZ_CP089940.1 Protein Homology CDS 2845335 2845607 . - 0 ID=cds-WP_016169737.1;Parent=gene-LU631_RS15175;Dbxref=Genbank:WP_016169737.1;Name=WP_016169737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003853763.1;locus_tag=LU631_RS15175;product=DUF333 domain-containing protein;protein_id=WP_016169737.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2845957 2846229 . + . ID=gene-LU631_RS15180;Name=LU631_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15180;old_locus_tag=LU631_15180 NZ_CP089940.1 Protein Homology CDS 2845957 2846229 . + 0 ID=cds-WP_016169738.1;Parent=gene-LU631_RS15180;Dbxref=Genbank:WP_016169738.1;Name=WP_016169738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202303.1;locus_tag=LU631_RS15180;product=putative quinol monooxygenase;protein_id=WP_016169738.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2846381 2847422 . + . ID=gene-LU631_RS15185;Name=LU631_RS15185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15185;old_locus_tag=LU631_15185;pseudo=true NZ_CP089940.1 Protein Homology CDS 2846381 2847422 . + 0 ID=cds-LU631_RS15185;Parent=gene-LU631_RS15185;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS15185;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2847862 2849070 . + . ID=gene-LU631_RS15190;Name=LU631_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15190;old_locus_tag=LU631_15190 NZ_CP089940.1 Protein Homology CDS 2847862 2849070 . + 0 ID=cds-WP_046371893.1;Parent=gene-LU631_RS15190;Dbxref=Genbank:WP_046371893.1;Name=WP_046371893.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU631_RS15190;product=IS256 family transposase;protein_id=WP_046371893.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2849104 2849294 . - . ID=gene-LU631_RS15195;Name=LU631_RS15195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15195;old_locus_tag=LU631_15195;partial=true;pseudo=true;start_range=.,2849104 NZ_CP089940.1 Protein Homology CDS 2849104 2849294 . - 0 ID=cds-LU631_RS15195;Parent=gene-LU631_RS15195;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157581.1;locus_tag=LU631_RS15195;partial=true;product=AraC family transcriptional regulator;pseudo=true;start_range=.,2849104;transl_table=11 NZ_CP089940.1 RefSeq gene 2849418 2849864 . - . ID=gene-LU631_RS15200;Name=LU631_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15200;old_locus_tag=LU631_15200 NZ_CP089940.1 Protein Homology CDS 2849418 2849864 . - 0 ID=cds-WP_016169740.1;Parent=gene-LU631_RS15200;Dbxref=Genbank:WP_016169740.1;Name=WP_016169740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202064.1;locus_tag=LU631_RS15200;product=Rrf2 family transcriptional regulator;protein_id=WP_016169740.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2850249 2850389 . + . ID=gene-LU631_RS15205;Name=LU631_RS15205;end_range=2850389,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15205;old_locus_tag=LU631_15205;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2850249 2850389 . + 0 ID=cds-LU631_RS15205;Parent=gene-LU631_RS15205;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2850389,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105173.1;locus_tag=LU631_RS15205;partial=true;product=sugar transporter;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2850388 2850617 . + . ID=gene-LU631_RS15210;Name=LU631_RS15210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15210;old_locus_tag=LU631_15210;partial=true;pseudo=true;start_range=.,2850388 NZ_CP089940.1 Protein Homology CDS 2850388 2850617 . + 0 ID=cds-LU631_RS15210;Parent=gene-LU631_RS15210;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441436.1;locus_tag=LU631_RS15210;partial=true;product=sugar transporter;pseudo=true;start_range=.,2850388;transl_table=11 NZ_CP089940.1 RefSeq gene 2850683 2850997 . - . ID=gene-LU631_RS15215;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=LU631_RS15215;old_locus_tag=LU631_15215 NZ_CP089940.1 Protein Homology CDS 2850683 2850997 . - 0 ID=cds-WP_016169742.1;Parent=gene-LU631_RS15215;Dbxref=Genbank:WP_016169742.1;Name=WP_016169742.1;Ontology_term=GO:0019301,GO:0016857;gbkey=CDS;gene=rhaM;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133904.1;locus_tag=LU631_RS15215;product=L-rhamnose mutarotase;protein_id=WP_016169742.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2850987 2851829 . - . ID=gene-LU631_RS15220;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=LU631_RS15220;old_locus_tag=LU631_15220 NZ_CP089940.1 Protein Homology CDS 2850987 2851829 . - 0 ID=cds-WP_016169743.1;Parent=gene-LU631_RS15220;Dbxref=Genbank:WP_016169743.1;Name=WP_016169743.1;Ontology_term=GO:0008994;gbkey=CDS;gene=rhaD;go_function=rhamnulose-1-phosphate aldolase activity|0008994||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202058.1;locus_tag=LU631_RS15220;product=rhamnulose-1-phosphate aldolase;protein_id=WP_016169743.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2851839 2853095 . - . ID=gene-LU631_RS15225;Name=LU631_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15225;old_locus_tag=LU631_15225 NZ_CP089940.1 Protein Homology CDS 2851839 2853095 . - 0 ID=cds-WP_016169744.1;Parent=gene-LU631_RS15225;Dbxref=Genbank:WP_016169744.1;Name=WP_016169744.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105828.1;locus_tag=LU631_RS15225;product=L-rhamnose isomerase;protein_id=WP_016169744.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2853092 2854564 . - . ID=gene-LU631_RS15230;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=LU631_RS15230;old_locus_tag=LU631_15230 NZ_CP089940.1 Protein Homology CDS 2853092 2854564 . - 0 ID=cds-WP_016169745.1;Parent=gene-LU631_RS15230;Dbxref=Genbank:WP_016169745.1;Name=WP_016169745.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202056.1;locus_tag=LU631_RS15230;product=rhamnulokinase;protein_id=WP_016169745.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2854865 2855692 . + . ID=gene-LU631_RS15235;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=LU631_RS15235;old_locus_tag=LU631_15235 NZ_CP089940.1 Protein Homology CDS 2854865 2855692 . + 0 ID=cds-WP_016169746.1;Parent=gene-LU631_RS15235;Dbxref=Genbank:WP_016169746.1;Name=WP_016169746.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003853688.1;locus_tag=LU631_RS15235;product=HTH-type transcriptional activator RhaS;protein_id=WP_016169746.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2855701 2856558 . + . ID=gene-LU631_RS15240;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=LU631_RS15240;old_locus_tag=LU631_15240 NZ_CP089940.1 Protein Homology CDS 2855701 2856558 . + 0 ID=cds-WP_016169747.1;Parent=gene-LU631_RS15240;Dbxref=Genbank:WP_016169747.1;Name=WP_016169747.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202054.1;locus_tag=LU631_RS15240;product=HTH-type transcriptional activator RhaR;protein_id=WP_016169747.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2856580 2856828 . - . ID=gene-LU631_RS15245;Name=LU631_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15245;old_locus_tag=LU631_15245 NZ_CP089940.1 Protein Homology CDS 2856580 2856828 . - 0 ID=cds-WP_016169748.1;Parent=gene-LU631_RS15245;Dbxref=Genbank:WP_016169748.1;Name=WP_016169748.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018123.2;locus_tag=LU631_RS15245;product=l-rhamnose-proton symporter;protein_id=WP_016169748.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2857075 2858742 . - . ID=gene-LU631_RS15250;Name=LU631_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15250;old_locus_tag=LU631_15250 NZ_CP089940.1 Protein Homology CDS 2857075 2858742 . - 0 ID=cds-WP_016169749.1;Parent=gene-LU631_RS15250;Dbxref=Genbank:WP_016169749.1;Name=WP_016169749.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668102.1;locus_tag=LU631_RS15250;product=methyl-accepting chemotaxis protein;protein_id=WP_016169749.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2859135 2859822 . + . ID=gene-LU631_RS15255;Name=LU631_RS15255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15255;old_locus_tag=LU631_15255;pseudo=true NZ_CP089940.1 Protein Homology CDS 2859135 2859822 . + 0 ID=cds-LU631_RS15255;Parent=gene-LU631_RS15255;Note=frameshifted%3B internal stop;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU631_RS15255;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2859936 2860937 . - . ID=gene-LU631_RS15260;Name=LU631_RS15260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15260;old_locus_tag=LU631_15260;pseudo=true NZ_CP089940.1 Protein Homology CDS 2859936 2860937 . - 0 ID=cds-LU631_RS15260;Parent=gene-LU631_RS15260;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315785.1;locus_tag=LU631_RS15260;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2861373 2862125 . + . ID=gene-LU631_RS15265;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=LU631_RS15265;old_locus_tag=LU631_15265 NZ_CP089940.1 Protein Homology CDS 2861373 2862125 . + 0 ID=cds-WP_016169753.1;Parent=gene-LU631_RS15265;Dbxref=Genbank:WP_016169753.1;Name=WP_016169753.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226802.1;locus_tag=LU631_RS15265;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_016169753.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2862185 2863213 . - . ID=gene-LU631_RS15270;Name=LU631_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15270;old_locus_tag=LU631_15270 NZ_CP089940.1 Protein Homology CDS 2862185 2863213 . - 0 ID=cds-WP_016169754.1;Parent=gene-LU631_RS15270;Dbxref=Genbank:WP_016169754.1;Name=WP_016169754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542747.1;locus_tag=LU631_RS15270;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_016169754.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2863226 2863429 . - . ID=gene-LU631_RS15275;Name=LU631_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15275;old_locus_tag=LU631_15275 NZ_CP089940.1 GeneMarkS-2+ CDS 2863226 2863429 . - 0 ID=cds-WP_157275201.1;Parent=gene-LU631_RS15275;Dbxref=Genbank:WP_157275201.1;Name=WP_157275201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS15275;product=hypothetical protein;protein_id=WP_157275201.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2863770 2863936 . + . ID=gene-LU631_RS15280;Name=LU631_RS15280;end_range=2863936,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15280;old_locus_tag=LU631_15280;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2863770 2863936 . + 0 ID=cds-LU631_RS15280;Parent=gene-LU631_RS15280;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2863936,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_065945178.1;locus_tag=LU631_RS15280;partial=true;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2864156 2864392 . + . ID=gene-LU631_RS15285;Name=LU631_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15285;old_locus_tag=LU631_15285 NZ_CP089940.1 Protein Homology CDS 2864156 2864392 . + 0 ID=cds-WP_016169756.1;Parent=gene-LU631_RS15285;Dbxref=Genbank:WP_016169756.1;Name=WP_016169756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088781.1;locus_tag=LU631_RS15285;product=hypothetical protein;protein_id=WP_016169756.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2864361 2865146 . - . ID=gene-LU631_RS15290;Name=LU631_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15290;old_locus_tag=LU631_15290 NZ_CP089940.1 Protein Homology CDS 2864361 2865146 . - 0 ID=cds-WP_016169757.1;Parent=gene-LU631_RS15290;Dbxref=Genbank:WP_016169757.1;Name=WP_016169757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192697.1;locus_tag=LU631_RS15290;product=DNA adenine methylase;protein_id=WP_016169757.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2865349 2865705 . + . ID=gene-LU631_RS15295;Name=LU631_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15295;old_locus_tag=LU631_15295 NZ_CP089940.1 GeneMarkS-2+ CDS 2865349 2865705 . + 0 ID=cds-WP_016169758.1;Parent=gene-LU631_RS15295;Dbxref=Genbank:WP_016169758.1;Name=WP_016169758.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS15295;product=acyltransferase;protein_id=WP_016169758.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2865929 2866081 . - . ID=gene-LU631_RS15300;Name=LU631_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15300;old_locus_tag=LU631_15300 NZ_CP089940.1 Protein Homology CDS 2865929 2866081 . - 0 ID=cds-WP_016169759.1;Parent=gene-LU631_RS15300;Dbxref=Genbank:WP_016169759.1;Name=WP_016169759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192699.1;locus_tag=LU631_RS15300;product=DUF1378 family protein;protein_id=WP_016169759.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2866142 2866714 . - . ID=gene-LU631_RS15305;Name=LU631_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15305;old_locus_tag=LU631_15305 NZ_CP089940.1 Protein Homology CDS 2866142 2866714 . - 0 ID=cds-WP_040465250.1;Parent=gene-LU631_RS15305;Dbxref=Genbank:WP_040465250.1;Name=WP_040465250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192701.1;locus_tag=LU631_RS15305;product=tail fiber assembly protein;protein_id=WP_040465250.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2866711 2867363 . - . ID=gene-LU631_RS15310;Name=LU631_RS15310;end_range=2867363,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15310;old_locus_tag=LU631_15310;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2866711 2867363 . - 0 ID=cds-LU631_RS15310;Parent=gene-LU631_RS15310;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2867363,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531541.1;locus_tag=LU631_RS15310;partial=true;product=phage tail protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2867554 2868933 . + . ID=gene-LU631_RS15315;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=LU631_RS15315;old_locus_tag=LU631_15315 NZ_CP089940.1 Protein Homology CDS 2867554 2868933 . + 0 ID=cds-WP_233481918.1;Parent=gene-LU631_RS15315;Dbxref=Genbank:WP_233481918.1;Name=WP_233481918.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456479.1;locus_tag=LU631_RS15315;product=IS21 family transposase;protein_id=WP_233481918.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2868937 2869542 . + . ID=gene-LU631_RS15320;Name=istB;gbkey=Gene;gene=istB;gene_biotype=pseudogene;locus_tag=LU631_RS15320;old_locus_tag=LU631_15320;partial=true;pseudo=true;start_range=.,2868937 NZ_CP089940.1 Protein Homology CDS 2868937 2869542 . + 0 ID=cds-LU631_RS15320;Parent=gene-LU631_RS15320;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;gbkey=CDS;gene=istB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802959.1;locus_tag=LU631_RS15320;partial=true;product=IS21-like element helper ATPase IstB;pseudo=true;start_range=.,2868937;transl_table=11 NZ_CP089940.1 RefSeq gene 2869595 2869921 . - . ID=gene-LU631_RS15325;Name=LU631_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15325;old_locus_tag=LU631_15325 NZ_CP089940.1 GeneMarkS-2+ CDS 2869595 2869921 . - 0 ID=cds-WP_016169765.1;Parent=gene-LU631_RS15325;Dbxref=Genbank:WP_016169765.1;Name=WP_016169765.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS15325;product=hypothetical protein;protein_id=WP_016169765.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2869921 2871372 . - . ID=gene-LU631_RS15330;Name=LU631_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15330;old_locus_tag=LU631_15330 NZ_CP089940.1 Protein Homology CDS 2869921 2871372 . - 0 ID=cds-WP_016169766.1;Parent=gene-LU631_RS15330;Dbxref=Genbank:WP_016169766.1;Name=WP_016169766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088840.1;locus_tag=LU631_RS15330;product=phage minor head protein;protein_id=WP_016169766.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2871365 2872921 . - . ID=gene-LU631_RS15335;Name=LU631_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15335;old_locus_tag=LU631_15335 NZ_CP089940.1 Protein Homology CDS 2871365 2872921 . - 0 ID=cds-WP_016169767.1;Parent=gene-LU631_RS15335;Dbxref=Genbank:WP_016169767.1;Name=WP_016169767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192721.1;locus_tag=LU631_RS15335;product=DUF935 domain-containing protein;protein_id=WP_016169767.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2872922 2873833 . - . ID=gene-LU631_RS15340;Name=terL;gbkey=Gene;gene=terL;gene_biotype=protein_coding;locus_tag=LU631_RS15340;old_locus_tag=LU631_15340 NZ_CP089940.1 Protein Homology CDS 2872922 2873833 . - 0 ID=cds-WP_232426790.1;Parent=gene-LU631_RS15340;Dbxref=Genbank:WP_232426790.1;Name=WP_232426790.1;gbkey=CDS;gene=terL;inference=COORDINATES: protein motif:HMM:TIGR01630.1;locus_tag=LU631_RS15340;product=phage terminase large subunit;protein_id=WP_232426790.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2873752 2874615 . - . ID=gene-LU631_RS15345;Name=LU631_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15345;old_locus_tag=LU631_15345 NZ_CP089940.1 GeneMarkS-2+ CDS 2873752 2874615 . - 0 ID=cds-WP_232426791.1;Parent=gene-LU631_RS15345;Dbxref=Genbank:WP_232426791.1;Name=WP_232426791.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS15345;product=hypothetical protein;protein_id=WP_232426791.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2874626 2874856 . - . ID=gene-LU631_RS15350;Name=LU631_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15350;old_locus_tag=LU631_15350 NZ_CP089940.1 Protein Homology CDS 2874626 2874856 . - 0 ID=cds-WP_016169768.1;Parent=gene-LU631_RS15350;Dbxref=Genbank:WP_016169768.1;Name=WP_016169768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192723.1;locus_tag=LU631_RS15350;product=hypothetical protein;protein_id=WP_016169768.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2874849 2875370 . - . ID=gene-LU631_RS15355;Name=LU631_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15355;old_locus_tag=LU631_15355 NZ_CP089940.1 Protein Homology CDS 2874849 2875370 . - 0 ID=cds-WP_016169769.1;Parent=gene-LU631_RS15355;Dbxref=Genbank:WP_016169769.1;Name=WP_016169769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088853.1;locus_tag=LU631_RS15355;product=DUF1804 family protein;protein_id=WP_016169769.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2875370 2875636 . - . ID=gene-LU631_RS15360;Name=LU631_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15360;old_locus_tag=LU631_15360 NZ_CP089940.1 Protein Homology CDS 2875370 2875636 . - 0 ID=cds-WP_016169770.1-2;Parent=gene-LU631_RS15360;Dbxref=Genbank:WP_016169770.1;Name=WP_016169770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169770.1;locus_tag=LU631_RS15360;product=hypothetical protein;protein_id=WP_016169770.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2875639 2875800 . - . ID=gene-LU631_RS15365;Name=LU631_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15365;old_locus_tag=LU631_15365 NZ_CP089940.1 Protein Homology CDS 2875639 2875800 . - 0 ID=cds-WP_233481919.1;Parent=gene-LU631_RS15365;Dbxref=Genbank:WP_233481919.1;Name=WP_233481919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118109.1;locus_tag=LU631_RS15365;product=hypothetical protein;protein_id=WP_233481919.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2875832 2876308 . - . ID=gene-LU631_RS15370;Name=LU631_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15370;old_locus_tag=LU631_15370 NZ_CP089940.1 Protein Homology CDS 2875832 2876308 . - 0 ID=cds-WP_232426793.1;Parent=gene-LU631_RS15370;Dbxref=Genbank:WP_232426793.1;Name=WP_232426793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192725.1;locus_tag=LU631_RS15370;product=hypothetical protein;protein_id=WP_232426793.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2876286 2876537 . - . ID=gene-LU631_RS15375;Name=LU631_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15375;old_locus_tag=LU631_15375 NZ_CP089940.1 Protein Homology CDS 2876286 2876537 . - 0 ID=cds-WP_232426794.1;Parent=gene-LU631_RS15375;Dbxref=Genbank:WP_232426794.1;Name=WP_232426794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088864.1;locus_tag=LU631_RS15375;product=DUF2644 domain-containing protein;protein_id=WP_232426794.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2876555 2877010 . - . ID=gene-LU631_RS15380;Name=LU631_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15380;old_locus_tag=LU631_15380 NZ_CP089940.1 Protein Homology CDS 2876555 2877010 . - 0 ID=cds-WP_016169773.1;Parent=gene-LU631_RS15380;Dbxref=Genbank:WP_016169773.1;Name=WP_016169773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192727.1;locus_tag=LU631_RS15380;product=lysozyme;protein_id=WP_016169773.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2877094 2877543 . - . ID=gene-LU631_RS15385;Name=LU631_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15385;old_locus_tag=LU631_15385 NZ_CP089940.1 Protein Homology CDS 2877094 2877543 . - 0 ID=cds-WP_016169774.1;Parent=gene-LU631_RS15385;Dbxref=Genbank:WP_016169774.1;Name=WP_016169774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192728.1;locus_tag=LU631_RS15385;product=hypothetical protein;protein_id=WP_016169774.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2877543 2877938 . - . ID=gene-LU631_RS15390;Name=LU631_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15390;old_locus_tag=LU631_15390 NZ_CP089940.1 Protein Homology CDS 2877543 2877938 . - 0 ID=cds-WP_016169775.1;Parent=gene-LU631_RS15390;Dbxref=Genbank:WP_016169775.1;Name=WP_016169775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192729.1;locus_tag=LU631_RS15390;product=regulatory protein GemA;protein_id=WP_016169775.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2878246 2878592 . + . ID=gene-LU631_RS15395;Name=LU631_RS15395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15395;old_locus_tag=LU631_15395;pseudo=true NZ_CP089940.1 Protein Homology CDS 2878246 2878592 . + 0 ID=cds-LU631_RS15395;Parent=gene-LU631_RS15395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022362.2;locus_tag=LU631_RS15395;product=DUF2778 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2878627 2879667 . - . ID=gene-LU631_RS15400;Name=LU631_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15400;old_locus_tag=LU631_15400 NZ_CP089940.1 Protein Homology CDS 2878627 2879667 . - 0 ID=cds-WP_046371813.1-13;Parent=gene-LU631_RS15400;Dbxref=Genbank:WP_046371813.1;Name=WP_046371813.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS15400;product=IS481 family transposase;protein_id=WP_046371813.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2880823 2880951 . + . ID=gene-LU631_RS26115;Name=LU631_RS26115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26115 NZ_CP089940.1 GeneMarkS-2+ CDS 2880823 2880951 . + 0 ID=cds-WP_016169778.1;Parent=gene-LU631_RS26115;Dbxref=Genbank:WP_016169778.1;Name=WP_016169778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS26115;product=hypothetical protein;protein_id=WP_016169778.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2881159 2881497 . + . ID=gene-LU631_RS15405;Name=LU631_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15405;old_locus_tag=LU631_15405 NZ_CP089940.1 GeneMarkS-2+ CDS 2881159 2881497 . + 0 ID=cds-WP_016169779.1;Parent=gene-LU631_RS15405;Dbxref=Genbank:WP_016169779.1;Name=WP_016169779.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS15405;product=phage protein;protein_id=WP_016169779.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2881565 2881807 . + . ID=gene-LU631_RS15410;Name=LU631_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15410;old_locus_tag=LU631_15410 NZ_CP089940.1 GeneMarkS-2+ CDS 2881565 2881807 . + 0 ID=cds-WP_016169780.1;Parent=gene-LU631_RS15410;Dbxref=Genbank:WP_016169780.1;Name=WP_016169780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS15410;product=hypothetical protein;protein_id=WP_016169780.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2881931 2882356 . - . ID=gene-LU631_RS15415;Name=LU631_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15415;old_locus_tag=LU631_15415 NZ_CP089940.1 Protein Homology CDS 2881931 2882356 . - 0 ID=cds-WP_016169781.1;Parent=gene-LU631_RS15415;Dbxref=Genbank:WP_016169781.1;Name=WP_016169781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703533.1;locus_tag=LU631_RS15415;product=hypothetical protein;protein_id=WP_016169781.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2882368 2882901 . - . ID=gene-LU631_RS15420;Name=LU631_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15420;old_locus_tag=LU631_15420 NZ_CP089940.1 Protein Homology CDS 2882368 2882901 . - 0 ID=cds-WP_052734734.1;Parent=gene-LU631_RS15420;Dbxref=Genbank:WP_052734734.1;Name=WP_052734734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854556.1;locus_tag=LU631_RS15420;product=hypothetical protein;protein_id=WP_052734734.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2883380 2884535 . - . ID=gene-LU631_RS15425;Name=LU631_RS15425;end_range=2884535,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15425;old_locus_tag=LU631_15425;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2883380 2884535 . - 0 ID=cds-LU631_RS15425;Parent=gene-LU631_RS15425;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2884535,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001388363.1;locus_tag=LU631_RS15425;partial=true;product=type II secretion system protein GspD;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2884528 2884734 . + . ID=gene-LU631_RS15430;Name=LU631_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15430;old_locus_tag=LU631_15430 NZ_CP089940.1 GeneMarkS-2+ CDS 2884528 2884734 . + 0 ID=cds-WP_040465252.1;Parent=gene-LU631_RS15430;Dbxref=Genbank:WP_040465252.1;Name=WP_040465252.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS15430;product=hypothetical protein;protein_id=WP_040465252.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2884975 2886139 . - . ID=gene-LU631_RS15435;Name=LU631_RS15435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15435;old_locus_tag=LU631_15435;pseudo=true NZ_CP089940.1 Protein Homology CDS 2884975 2886139 . - 0 ID=cds-LU631_RS15435;Parent=gene-LU631_RS15435;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612263.1;locus_tag=LU631_RS15435;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2886201 2886482 . + . ID=gene-LU631_RS15440;Name=LU631_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15440;old_locus_tag=LU631_15440 NZ_CP089940.1 Protein Homology CDS 2886201 2886482 . + 0 ID=cds-WP_233481920.1;Parent=gene-LU631_RS15440;Dbxref=Genbank:WP_233481920.1;Name=WP_233481920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661716.1;locus_tag=LU631_RS15440;product=hypothetical protein;protein_id=WP_233481920.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2886684 2887892 . + . ID=gene-LU631_RS15445;Name=LU631_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15445;old_locus_tag=LU631_15445 NZ_CP089940.1 Protein Homology CDS 2886684 2887892 . + 0 ID=cds-WP_046371898.1;Parent=gene-LU631_RS15445;Dbxref=Genbank:WP_046371898.1;Name=WP_046371898.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS15445;product=IS256 family transposase;protein_id=WP_046371898.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2888035 2889075 . + . ID=gene-LU631_RS15450;Name=LU631_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15450;old_locus_tag=LU631_15450 NZ_CP089940.1 Protein Homology CDS 2888035 2889075 . + 0 ID=cds-WP_046371899.1;Parent=gene-LU631_RS15450;Dbxref=Genbank:WP_046371899.1;Name=WP_046371899.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS15450;product=IS481 family transposase;protein_id=WP_046371899.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2889873 2890454 . + . ID=gene-LU631_RS15455;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=LU631_RS15455;old_locus_tag=LU631_15455 NZ_CP089940.1 Protein Homology CDS 2889873 2890454 . + 0 ID=cds-WP_016169785.1;Parent=gene-LU631_RS15455;Dbxref=Genbank:WP_016169785.1;Name=WP_016169785.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010245384.1;locus_tag=LU631_RS15455;product=electron transport complex subunit RsxA;protein_id=WP_016169785.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2890454 2891029 . + . ID=gene-LU631_RS15460;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=LU631_RS15460;old_locus_tag=LU631_15460 NZ_CP089940.1 Protein Homology CDS 2890454 2891029 . + 0 ID=cds-WP_016169786.1;Parent=gene-LU631_RS15460;Dbxref=Genbank:WP_016169786.1;Name=WP_016169786.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441510.1;locus_tag=LU631_RS15460;product=electron transport complex subunit RsxB;protein_id=WP_016169786.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2891022 2892728 . + . ID=gene-LU631_RS15465;Name=rsxC;end_range=2892728,.;gbkey=Gene;gene=rsxC;gene_biotype=pseudogene;locus_tag=LU631_RS15465;old_locus_tag=LU631_15465;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2891022 2892728 . + 0 ID=cds-LU631_RS15465;Parent=gene-LU631_RS15465;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009055,GO:0051539,GO:0016020;end_range=2892728,.;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157471.1;locus_tag=LU631_RS15465;partial=true;product=electron transport complex subunit RsxC;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2892822 2893883 . + . ID=gene-LU631_RS15470;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=LU631_RS15470;old_locus_tag=LU631_15470 NZ_CP089940.1 Protein Homology CDS 2892822 2893883 . + 0 ID=cds-WP_016169788.1;Parent=gene-LU631_RS15470;Dbxref=Genbank:WP_016169788.1;Name=WP_016169788.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169738.1;locus_tag=LU631_RS15470;product=electron transport complex subunit RsxD;protein_id=WP_016169788.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2893883 2894515 . + . ID=gene-LU631_RS15475;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=LU631_RS15475;old_locus_tag=LU631_15475 NZ_CP089940.1 Protein Homology CDS 2893883 2894515 . + 0 ID=cds-WP_016169789.1;Parent=gene-LU631_RS15475;Dbxref=Genbank:WP_016169789.1;Name=WP_016169789.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668173.1;locus_tag=LU631_RS15475;product=electron transport complex subunit RsxG;protein_id=WP_016169789.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2894508 2895203 . + . ID=gene-LU631_RS15480;Name=LU631_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15480;old_locus_tag=LU631_15480 NZ_CP089940.1 Protein Homology CDS 2894508 2895203 . + 0 ID=cds-WP_016169790.1;Parent=gene-LU631_RS15480;Dbxref=Genbank:WP_016169790.1;Name=WP_016169790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289652.1;locus_tag=LU631_RS15480;product=electron transport complex subunit E;protein_id=WP_016169790.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2895200 2895832 . + . ID=gene-LU631_RS15485;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=LU631_RS15485;old_locus_tag=LU631_15485 NZ_CP089940.1 Protein Homology CDS 2895200 2895832 . + 0 ID=cds-WP_016169791.1;Parent=gene-LU631_RS15485;Dbxref=Genbank:WP_016169791.1;Name=WP_016169791.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849001.1;locus_tag=LU631_RS15485;product=endonuclease III;protein_id=WP_016169791.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2896161 2896979 . + . ID=gene-LU631_RS15490;Name=LU631_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15490;old_locus_tag=LU631_15490 NZ_CP089940.1 GeneMarkS-2+ CDS 2896161 2896979 . + 0 ID=cds-WP_016169792.1;Parent=gene-LU631_RS15490;Dbxref=Genbank:WP_016169792.1;Name=WP_016169792.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS15490;product=hypothetical protein;protein_id=WP_016169792.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2897087 2897761 . - . ID=gene-LU631_RS15495;Name=LU631_RS15495;end_range=2897761,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15495;old_locus_tag=LU631_15495;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2897087 2897761 . - 0 ID=cds-LU631_RS15495;Parent=gene-LU631_RS15495;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016614;end_range=2897761,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201963.1;locus_tag=LU631_RS15495;partial=true;product=GMC oxidoreductase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2897963 2898710 . - . ID=gene-LU631_RS15500;Name=LU631_RS15500;end_range=2898710,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15500;old_locus_tag=LU631_15500;partial=true;pseudo=true;start_range=.,2897963 NZ_CP089940.1 Protein Homology CDS 2897963 2898710 . - 0 ID=cds-LU631_RS15500;Parent=gene-LU631_RS15500;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016614,GO:0050660;end_range=2898710,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157459.1;locus_tag=LU631_RS15500;partial=true;product=GMC family oxidoreductase N-terminal domain-containing protein;pseudo=true;start_range=.,2897963;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2898714 2898857 . + . ID=gene-LU631_RS15505;Name=LU631_RS15505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15505;old_locus_tag=LU631_15505;partial=true;pseudo=true;start_range=.,2898714 NZ_CP089940.1 Protein Homology CDS 2898714 2898857 . + 0 ID=cds-LU631_RS15505;Parent=gene-LU631_RS15505;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802215.1;locus_tag=LU631_RS15505;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2898714;transl_table=11 NZ_CP089940.1 RefSeq gene 2899064 2899666 . + . ID=gene-LU631_RS15510;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=LU631_RS15510;old_locus_tag=LU631_15510 NZ_CP089940.1 Protein Homology CDS 2899064 2899666 . + 0 ID=cds-WP_016169794.1;Parent=gene-LU631_RS15510;Dbxref=Genbank:WP_016169794.1;Name=WP_016169794.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201956.1;locus_tag=LU631_RS15510;product=glutathione transferase GstA;protein_id=WP_016169794.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2899777 2900673 . - . ID=gene-LU631_RS15515;Name=LU631_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15515;old_locus_tag=LU631_15515 NZ_CP089940.1 GeneMarkS-2+ CDS 2899777 2900673 . - 0 ID=cds-WP_200896930.1;Parent=gene-LU631_RS15515;Dbxref=Genbank:WP_200896930.1;Name=WP_200896930.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS15515;product=hypothetical protein;protein_id=WP_200896930.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2900829 2901698 . - . ID=gene-LU631_RS15520;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=LU631_RS15520;old_locus_tag=LU631_15520 NZ_CP089940.1 Protein Homology CDS 2900829 2901698 . - 0 ID=cds-WP_016169796.1;Parent=gene-LU631_RS15520;Dbxref=Genbank:WP_016169796.1;Name=WP_016169796.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210961.1;locus_tag=LU631_RS15520;product=pyridoxal kinase PdxY;protein_id=WP_016169796.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2901748 2903022 . - . ID=gene-LU631_RS15525;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=LU631_RS15525;old_locus_tag=LU631_15525 NZ_CP089940.1 Protein Homology CDS 2901748 2903022 . - 0 ID=cds-WP_016169797.1;Parent=gene-LU631_RS15525;Dbxref=Genbank:WP_016169797.1;Name=WP_016169797.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=LU631_RS15525;product=tyrosine--tRNA ligase;protein_id=WP_016169797.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2903169 2903825 . - . ID=gene-LU631_RS15530;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=LU631_RS15530;old_locus_tag=LU631_15530 NZ_CP089940.1 Protein Homology CDS 2903169 2903825 . - 0 ID=cds-WP_016169798.1;Parent=gene-LU631_RS15530;Dbxref=Genbank:WP_016169798.1;Name=WP_016169798.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=LU631_RS15530;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_016169798.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2904175 2905296 . - . ID=gene-LU631_RS15535;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=LU631_RS15535;old_locus_tag=LU631_15535 NZ_CP089940.1 Protein Homology CDS 2904175 2905296 . - 0 ID=cds-WP_016169799.1;Parent=gene-LU631_RS15535;Dbxref=Genbank:WP_016169799.1;Name=WP_016169799.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201951.1;locus_tag=LU631_RS15535;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_016169799.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2905583 2906050 . + . ID=gene-LU631_RS15540;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=LU631_RS15540;old_locus_tag=LU631_15540 NZ_CP089940.1 Protein Homology CDS 2905583 2906050 . + 0 ID=cds-WP_016169800.1;Parent=gene-LU631_RS15540;Dbxref=Genbank:WP_016169800.1;Name=WP_016169800.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310377.1;locus_tag=LU631_RS15540;product=outer membrane lipoprotein SlyB;protein_id=WP_016169800.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2906158 2907480 . + . ID=gene-LU631_RS15545;Name=LU631_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15545;old_locus_tag=LU631_15545 NZ_CP089940.1 Protein Homology CDS 2906158 2907480 . + 0 ID=cds-WP_046371900.1-3;Parent=gene-LU631_RS15545;Dbxref=Genbank:WP_046371900.1;Name=WP_046371900.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS15545;product=IS4 family transposase;protein_id=WP_046371900.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2907600 2908250 . - . ID=gene-LU631_RS15550;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=LU631_RS15550;old_locus_tag=LU631_15550 NZ_CP089940.1 Protein Homology CDS 2907600 2908250 . - 0 ID=cds-WP_016169801.1;Parent=gene-LU631_RS15550;Dbxref=Genbank:WP_016169801.1;Name=WP_016169801.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201940.1;locus_tag=LU631_RS15550;product=ribonuclease T;protein_id=WP_016169801.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2908353 2908760 . - . ID=gene-LU631_RS15555;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=LU631_RS15555;old_locus_tag=LU631_15555 NZ_CP089940.1 Protein Homology CDS 2908353 2908760 . - 0 ID=cds-WP_016169802.1;Parent=gene-LU631_RS15555;Dbxref=Genbank:WP_016169802.1;Name=WP_016169802.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025612.1;locus_tag=LU631_RS15555;product=lactoylglutathione lyase;protein_id=WP_016169802.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2908847 2909329 . - . ID=gene-LU631_RS15560;Name=LU631_RS15560;end_range=2909329,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15560;old_locus_tag=LU631_15560;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2908847 2909329 . - 0 ID=cds-LU631_RS15560;Parent=gene-LU631_RS15560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2909329,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441536.1;locus_tag=LU631_RS15560;partial=true;product=N-ethylmaleimide reductase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2909561 2909800 . + . ID=gene-LU631_RS15565;Name=LU631_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15565;old_locus_tag=LU631_15565 NZ_CP089940.1 Protein Homology CDS 2909561 2909800 . + 0 ID=cds-WP_071598843.1;Parent=gene-LU631_RS15565;Dbxref=Genbank:WP_071598843.1;Name=WP_071598843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891815.1;locus_tag=LU631_RS15565;product=DUF1289 domain-containing protein;protein_id=WP_071598843.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2910645 2911082 . + . ID=gene-LU631_RS15570;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=LU631_RS15570;old_locus_tag=LU631_15570 NZ_CP089940.1 Protein Homology CDS 2910645 2911082 . + 0 ID=cds-WP_016169806.1;Parent=gene-LU631_RS15570;Dbxref=Genbank:WP_016169806.1;Name=WP_016169806.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118997.1;locus_tag=LU631_RS15570;product=transcriptional regulator SlyA;protein_id=WP_016169806.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2911271 2912311 . + . ID=gene-LU631_RS15575;Name=LU631_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15575;old_locus_tag=LU631_15575 NZ_CP089940.1 Protein Homology CDS 2911271 2912311 . + 0 ID=cds-WP_046371818.1-4;Parent=gene-LU631_RS15575;Dbxref=Genbank:WP_046371818.1;Name=WP_046371818.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS15575;product=IS481 family transposase;protein_id=WP_046371818.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2912381 2913705 . - . ID=gene-LU631_RS15580;Name=LU631_RS15580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15580;old_locus_tag=LU631_15580;pseudo=true NZ_CP089940.1 Protein Homology CDS 2912381 2913705 . - 0 ID=cds-LU631_RS15580;Parent=gene-LU631_RS15580;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS15580;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2913968 2914309 . - . ID=gene-LU631_RS15585;Name=LU631_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15585;old_locus_tag=LU631_15585 NZ_CP089940.1 Protein Homology CDS 2913968 2914309 . - 0 ID=cds-WP_161796966.1;Parent=gene-LU631_RS15585;Dbxref=Genbank:WP_161796966.1;Name=WP_161796966.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201938.1;locus_tag=LU631_RS15585;product=Grx4 family monothiol glutaredoxin;protein_id=WP_161796966.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2914806 2915503 . + . ID=gene-LU631_RS15590;Name=LU631_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15590;old_locus_tag=LU631_15590 NZ_CP089940.1 Protein Homology CDS 2914806 2915055 . + 0 ID=cds-WP_233481921.1;Parent=gene-LU631_RS15590;Dbxref=Genbank:WP_233481921.1;Name=WP_233481921.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS15590;product=IS1 family transposase;protein_id=WP_233481921.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 2915055 2915503 . + 2 ID=cds-WP_233481921.1;Parent=gene-LU631_RS15590;Dbxref=Genbank:WP_233481921.1;Name=WP_233481921.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS15590;product=IS1 family transposase;protein_id=WP_233481921.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2915519 2915701 . + . ID=gene-LU631_RS15595;Name=LU631_RS15595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15595;old_locus_tag=LU631_15595;partial=true;pseudo=true;start_range=.,2915519 NZ_CP089940.1 Protein Homology CDS 2915519 2915701 . + 0 ID=cds-LU631_RS15595;Parent=gene-LU631_RS15595;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001261935.1;locus_tag=LU631_RS15595;partial=true;product=DinI-like family protein;pseudo=true;start_range=.,2915519;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2916046 2916465 . + . ID=gene-LU631_RS15600;Name=LU631_RS15600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15600;old_locus_tag=LU631_15600;partial=true;pseudo=true;start_range=.,2916046 NZ_CP089940.1 Protein Homology CDS 2916046 2916465 . + 0 ID=cds-LU631_RS15600;Parent=gene-LU631_RS15600;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611788.1;locus_tag=LU631_RS15600;partial=true;product=IS4/IS5 family transposase;pseudo=true;start_range=.,2916046;transl_table=11 NZ_CP089940.1 RefSeq gene 2916535 2916684 . + . ID=gene-LU631_RS15605;Name=LU631_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15605;old_locus_tag=LU631_15605 NZ_CP089940.1 GeneMarkS-2+ CDS 2916535 2916684 . + 0 ID=cds-WP_016169809.1;Parent=gene-LU631_RS15605;Dbxref=Genbank:WP_016169809.1;Name=WP_016169809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS15605;product=hypothetical protein;protein_id=WP_016169809.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2917026 2917319 . - . ID=gene-LU631_RS15610;Name=LU631_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15610;old_locus_tag=LU631_15610 NZ_CP089940.1 Protein Homology CDS 2917026 2917319 . - 0 ID=cds-WP_016169811.1;Parent=gene-LU631_RS15610;Dbxref=Genbank:WP_016169811.1;Name=WP_016169811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000090004.1;locus_tag=LU631_RS15610;product=hypothetical protein;protein_id=WP_016169811.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2918457 2919263 . + . ID=gene-LU631_RS15615;Name=LU631_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15615;old_locus_tag=LU631_15615 NZ_CP089940.1 Protein Homology CDS 2918457 2919263 . + 0 ID=cds-WP_040465347.1;Parent=gene-LU631_RS15615;Dbxref=Genbank:WP_040465347.1;Name=WP_040465347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593610.1;locus_tag=LU631_RS15615;product=C40 family peptidase;protein_id=WP_040465347.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2919669 2920688 . + . ID=gene-LU631_RS15620;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=LU631_RS15620;old_locus_tag=LU631_15620 NZ_CP089940.1 Protein Homology CDS 2919669 2920688 . + 0 ID=cds-WP_016169813.1;Parent=gene-LU631_RS15620;Dbxref=Genbank:WP_016169813.1;Name=WP_016169813.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813250.1;locus_tag=LU631_RS15620;product=HTH-type transcriptional repressor PurR;protein_id=WP_016169813.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2920749 2921789 . - . ID=gene-LU631_RS15625;Name=LU631_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15625;old_locus_tag=LU631_15625 NZ_CP089940.1 Protein Homology CDS 2920749 2921789 . - 0 ID=cds-WP_046371791.1-13;Parent=gene-LU631_RS15625;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS15625;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2922024 2922929 . - . ID=gene-LU631_RS15630;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=LU631_RS15630;old_locus_tag=LU631_15630 NZ_CP089940.1 Protein Homology CDS 2922024 2922929 . - 0 ID=cds-WP_016169814.1;Parent=gene-LU631_RS15630;Dbxref=Genbank:WP_016169814.1;Name=WP_016169814.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172588.1;locus_tag=LU631_RS15630;product=DNA-binding transcriptional activator PunR;protein_id=WP_016169814.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2923043 2924224 . + . ID=gene-LU631_RS15635;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;locus_tag=LU631_RS15635;old_locus_tag=LU631_15635 NZ_CP089940.1 Protein Homology CDS 2923043 2924224 . + 0 ID=cds-WP_016169815.1;Parent=gene-LU631_RS15635;Dbxref=Genbank:WP_016169815.1;Name=WP_016169815.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201934.1;locus_tag=LU631_RS15635;product=purine nucleoside transporter PunC;protein_id=WP_016169815.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2924441 2925094 . - . ID=gene-LU631_RS15640;Name=LU631_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15640;old_locus_tag=LU631_15640 NZ_CP089940.1 Protein Homology CDS 2924441 2925094 . - 0 ID=cds-WP_016169816.1;Parent=gene-LU631_RS15640;Dbxref=Genbank:WP_016169816.1;Name=WP_016169816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118980.1;locus_tag=LU631_RS15640;product=riboflavin synthase;protein_id=WP_016169816.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2925373 2926746 . + . ID=gene-LU631_RS15645;Name=LU631_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15645;old_locus_tag=LU631_15645 NZ_CP089940.1 Protein Homology CDS 2925373 2926746 . + 0 ID=cds-WP_016169817.1;Parent=gene-LU631_RS15645;Dbxref=Genbank:WP_016169817.1;Name=WP_016169817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201931.1;locus_tag=LU631_RS15645;product=MATE family efflux transporter;protein_id=WP_016169817.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2926895 2926971 . + . ID=gene-LU631_RS15650;Name=LU631_RS15650;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS15650;old_locus_tag=LU631_15650 NZ_CP089940.1 tRNAscan-SE tRNA 2926895 2926971 . + . ID=rna-LU631_RS15650;Parent=gene-LU631_RS15650;anticodon=(pos:2926929..2926931);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS15650;product=tRNA-Val NZ_CP089940.1 tRNAscan-SE exon 2926895 2926971 . + . ID=exon-LU631_RS15650-1;Parent=rna-LU631_RS15650;anticodon=(pos:2926929..2926931);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS15650;product=tRNA-Val NZ_CP089940.1 RefSeq gene 2926976 2927052 . + . ID=gene-LU631_RS15655;Name=LU631_RS15655;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS15655;old_locus_tag=LU631_15655 NZ_CP089940.1 tRNAscan-SE tRNA 2926976 2927052 . + . ID=rna-LU631_RS15655;Parent=gene-LU631_RS15655;anticodon=(pos:2927010..2927012);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS15655;product=tRNA-Val NZ_CP089940.1 tRNAscan-SE exon 2926976 2927052 . + . ID=exon-LU631_RS15655-1;Parent=rna-LU631_RS15655;anticodon=(pos:2927010..2927012);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS15655;product=tRNA-Val NZ_CP089940.1 RefSeq gene 2927060 2927136 . + . ID=gene-LU631_RS15660;Name=LU631_RS15660;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS15660;old_locus_tag=LU631_15660 NZ_CP089940.1 tRNAscan-SE tRNA 2927060 2927136 . + . ID=rna-LU631_RS15660;Parent=gene-LU631_RS15660;anticodon=(pos:2927094..2927096);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS15660;product=tRNA-Val NZ_CP089940.1 tRNAscan-SE exon 2927060 2927136 . + . ID=exon-LU631_RS15660-1;Parent=rna-LU631_RS15660;anticodon=(pos:2927094..2927096);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS15660;product=tRNA-Val NZ_CP089940.1 RefSeq gene 2927492 2928904 . + . ID=gene-LU631_RS15665;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=LU631_RS15665;old_locus_tag=LU631_15665 NZ_CP089940.1 Protein Homology CDS 2927492 2928904 . + 0 ID=cds-WP_016169818.1;Parent=gene-LU631_RS15665;Dbxref=Genbank:WP_016169818.1;Name=WP_016169818.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=LU631_RS15665;product=pyruvate kinase PykF;protein_id=WP_016169818.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2929068 2929498 . + . ID=gene-LU631_RS15670;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS15670;old_locus_tag=LU631_15670;pseudo=true NZ_CP089940.1 Protein Homology CDS 2929068 2929498 . + 0 ID=cds-LU631_RS15670;Parent=gene-LU631_RS15670;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU631_RS15670;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2929770 2930971 . - . ID=gene-LU631_RS15675;Name=LU631_RS15675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15675;old_locus_tag=LU631_15675;pseudo=true NZ_CP089940.1 Protein Homology CDS 2929770 2930971 . - 0 ID=cds-LU631_RS15675;Parent=gene-LU631_RS15675;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU631_RS15675;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2931338 2932466 . + . ID=gene-LU631_RS15680;Name=LU631_RS15680;end_range=2932466,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15680;old_locus_tag=LU631_15680;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 2931338 2932466 . + 0 ID=cds-LU631_RS15680;Parent=gene-LU631_RS15680;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2932466,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612097.1;locus_tag=LU631_RS15680;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2932623 2933663 . - . ID=gene-LU631_RS15685;Name=LU631_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15685;old_locus_tag=LU631_15685 NZ_CP089940.1 Protein Homology CDS 2932623 2933663 . - 0 ID=cds-WP_046371791.1-14;Parent=gene-LU631_RS15685;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS15685;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2933875 2934210 . + . ID=gene-LU631_RS15690;Name=LU631_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15690;old_locus_tag=LU631_15690 NZ_CP089940.1 GeneMarkS-2+ CDS 2933875 2934210 . + 0 ID=cds-WP_052734695.1-9;Parent=gene-LU631_RS15690;Dbxref=Genbank:WP_052734695.1;Name=WP_052734695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS15690;product=hypothetical protein;protein_id=WP_052734695.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2934219 2935433 . + . ID=gene-LU631_RS15695;Name=LU631_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15695;old_locus_tag=LU631_15695 NZ_CP089940.1 Protein Homology CDS 2934219 2935433 . + 0 ID=cds-WP_046371879.1-12;Parent=gene-LU631_RS15695;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS15695;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2935587 2936015 . + . ID=gene-LU631_RS15700;Name=LU631_RS15700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15700;old_locus_tag=LU631_15700;partial=true;pseudo=true;start_range=.,2935587 NZ_CP089940.1 Protein Homology CDS 2935587 2936015 . + 0 ID=cds-LU631_RS15700;Parent=gene-LU631_RS15700;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS15700;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,2935587;transl_table=11 NZ_CP089940.1 RefSeq gene 2936317 2936553 . + . ID=gene-LU631_RS15705;Name=LU631_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15705;old_locus_tag=LU631_15705 NZ_CP089940.1 Protein Homology CDS 2936317 2936553 . + 0 ID=cds-WP_016169824.1;Parent=gene-LU631_RS15705;Dbxref=Genbank:WP_016169824.1;Name=WP_016169824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157411.1;locus_tag=LU631_RS15705;product=major outer membrane lipoprotein;protein_id=WP_016169824.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2937080 2938605 . - . ID=gene-LU631_RS15710;Name=LU631_RS15710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15710;old_locus_tag=LU631_15710;pseudo=true NZ_CP089940.1 Protein Homology CDS 2937080 2938605 . - 0 ID=cds-LU631_RS15710;Parent=gene-LU631_RS15710;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080172.1;locus_tag=LU631_RS15710;product=IS66 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2938634 2938966 . - . ID=gene-LU631_RS15715;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=LU631_RS15715;old_locus_tag=LU631_15715 NZ_CP089940.1 Protein Homology CDS 2938634 2938966 . - 0 ID=cds-WP_016169827.1;Parent=gene-LU631_RS15715;Dbxref=Genbank:WP_016169827.1;Name=WP_016169827.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631643.1;locus_tag=LU631_RS15715;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_016169827.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2939335 2939757 . - . ID=gene-LU631_RS15720;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=LU631_RS15720;old_locus_tag=LU631_15720 NZ_CP089940.1 Protein Homology CDS 2939335 2939757 . - 0 ID=cds-WP_016169828.1;Parent=gene-LU631_RS15720;Dbxref=Genbank:WP_016169828.1;Name=WP_016169828.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096952.1;locus_tag=LU631_RS15720;product=cysteine desulfuration protein SufE;protein_id=WP_016169828.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2939780 2941000 . - . ID=gene-LU631_RS15725;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=LU631_RS15725;old_locus_tag=LU631_15725 NZ_CP089940.1 Protein Homology CDS 2939780 2941000 . - 0 ID=cds-WP_016169829.1;Parent=gene-LU631_RS15725;Dbxref=Genbank:WP_016169829.1;Name=WP_016169829.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004386230.1;locus_tag=LU631_RS15725;product=cysteine desulfurase SufS;protein_id=WP_016169829.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2940997 2942280 . - . ID=gene-LU631_RS15730;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=LU631_RS15730;old_locus_tag=LU631_15730 NZ_CP089940.1 Protein Homology CDS 2940997 2942280 . - 0 ID=cds-WP_016169830.1;Parent=gene-LU631_RS15730;Dbxref=Genbank:WP_016169830.1;Name=WP_016169830.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157408.1;locus_tag=LU631_RS15730;product=Fe-S cluster assembly protein SufD;protein_id=WP_016169830.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2942255 2943001 . - . ID=gene-LU631_RS15735;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=LU631_RS15735;old_locus_tag=LU631_15735 NZ_CP089940.1 Protein Homology CDS 2942255 2943001 . - 0 ID=cds-WP_016169831.1;Parent=gene-LU631_RS15735;Dbxref=Genbank:WP_016169831.1;Name=WP_016169831.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=LU631_RS15735;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_016169831.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2943058 2944551 . - . ID=gene-LU631_RS15740;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=LU631_RS15740;old_locus_tag=LU631_15740 NZ_CP089940.1 Protein Homology CDS 2943058 2944551 . - 0 ID=cds-WP_016169832.1;Parent=gene-LU631_RS15740;Dbxref=Genbank:WP_016169832.1;Name=WP_016169832.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227425.1;locus_tag=LU631_RS15740;product=Fe-S cluster assembly protein SufB;protein_id=WP_016169832.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2944557 2944931 . - . ID=gene-LU631_RS15745;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=LU631_RS15745;old_locus_tag=LU631_15745 NZ_CP089940.1 Protein Homology CDS 2944557 2944931 . - 0 ID=cds-WP_016169833.1;Parent=gene-LU631_RS15745;Dbxref=Genbank:WP_016169833.1;Name=WP_016169833.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025593.1;locus_tag=LU631_RS15745;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_016169833.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2945323 2945715 . + . ID=gene-LU631_RS15750;Name=LU631_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15750;old_locus_tag=LU631_15750 NZ_CP089940.1 Protein Homology CDS 2945323 2945715 . + 0 ID=cds-WP_016169834.1;Parent=gene-LU631_RS15750;Dbxref=Genbank:WP_016169834.1;Name=WP_016169834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013508839.1;locus_tag=LU631_RS15750;product=hypothetical protein;protein_id=WP_016169834.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2945743 2946180 . - . ID=gene-LU631_RS15755;Name=LU631_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15755;old_locus_tag=LU631_15755 NZ_CP089940.1 Protein Homology CDS 2945743 2946180 . - 0 ID=cds-WP_016169835.1;Parent=gene-LU631_RS15755;Dbxref=Genbank:WP_016169835.1;Name=WP_016169835.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201920.1;locus_tag=LU631_RS15755;product=hotdog fold thioesterase;protein_id=WP_016169835.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2946180 2949239 . - . ID=gene-LU631_RS15760;Name=LU631_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15760;old_locus_tag=LU631_15760 NZ_CP089940.1 Protein Homology CDS 2946180 2949239 . - 0 ID=cds-WP_016169836.1;Parent=gene-LU631_RS15760;Dbxref=Genbank:WP_016169836.1;Name=WP_016169836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007892713.1;locus_tag=LU631_RS15760;product=FAD-binding and (Fe-S)-binding domain-containing protein;protein_id=WP_016169836.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2949460 2950575 . + . ID=gene-LU631_RS15765;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=LU631_RS15765;old_locus_tag=LU631_15765 NZ_CP089940.1 Protein Homology CDS 2949460 2950575 . + 0 ID=cds-WP_016169837.1;Parent=gene-LU631_RS15765;Dbxref=Genbank:WP_016169837.1;Name=WP_016169837.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441555.1;locus_tag=LU631_RS15765;product=AI-2E family transporter YdiK;protein_id=WP_016169837.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2950826 2950934 . + . ID=gene-LU631_RS15770;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=LU631_RS15770;old_locus_tag=LU631_15770 NZ_CP089940.1 cmsearch antisense_RNA 2950826 2950934 . + . ID=rna-LU631_RS15770;Parent=gene-LU631_RS15770;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS15770;product=antisense sRNA RprA NZ_CP089940.1 cmsearch exon 2950826 2950934 . + . ID=exon-LU631_RS15770-1;Parent=rna-LU631_RS15770;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS15770;product=antisense sRNA RprA NZ_CP089940.1 RefSeq gene 2950989 2953373 . - . ID=gene-LU631_RS15775;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=LU631_RS15775;old_locus_tag=LU631_15775 NZ_CP089940.1 Protein Homology CDS 2950989 2953373 . - 0 ID=cds-WP_016169838.1;Parent=gene-LU631_RS15775;Dbxref=Genbank:WP_016169838.1;Name=WP_016169838.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668214.1;locus_tag=LU631_RS15775;product=phosphoenolpyruvate synthase;protein_id=WP_016169838.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2953790 2954487 . + . ID=gene-LU631_RS15780;Name=LU631_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15780;old_locus_tag=LU631_15780 NZ_CP089940.1 Protein Homology CDS 2953790 2954039 . + 0 ID=cds-WP_233481922.1;Parent=gene-LU631_RS15780;Dbxref=Genbank:WP_233481922.1;Name=WP_233481922.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS15780;product=IS1 family transposase;protein_id=WP_233481922.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 2954039 2954487 . + 2 ID=cds-WP_233481922.1;Parent=gene-LU631_RS15780;Dbxref=Genbank:WP_233481922.1;Name=WP_233481922.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS15780;product=IS1 family transposase;protein_id=WP_233481922.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2954581 2955408 . + . ID=gene-LU631_RS15785;Name=LU631_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15785;old_locus_tag=LU631_15785 NZ_CP089940.1 Protein Homology CDS 2954581 2955408 . + 0 ID=cds-WP_016169839.1;Parent=gene-LU631_RS15785;Dbxref=Genbank:WP_016169839.1;Name=WP_016169839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118966.1;locus_tag=LU631_RS15785;product=kinase/pyrophosphorylase;protein_id=WP_016169839.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2955561 2956607 . + . ID=gene-LU631_RS15790;Name=LU631_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15790;old_locus_tag=LU631_15790 NZ_CP089940.1 Protein Homology CDS 2955561 2956607 . + 0 ID=cds-WP_016169840.1;Parent=gene-LU631_RS15790;Dbxref=Genbank:WP_016169840.1;Name=WP_016169840.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=LU631_RS15790;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_016169840.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2956671 2958215 . - . ID=gene-LU631_RS15795;Name=LU631_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15795;old_locus_tag=LU631_15795 NZ_CP089940.1 Protein Homology CDS 2956671 2958215 . - 0 ID=cds-WP_016169841.1;Parent=gene-LU631_RS15795;Dbxref=Genbank:WP_016169841.1;Name=WP_016169841.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013027297.1;locus_tag=LU631_RS15795;product=methyl-accepting chemotaxis protein;protein_id=WP_016169841.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2958439 2959644 . - . ID=gene-LU631_RS15800;Name=LU631_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15800;old_locus_tag=LU631_15800 NZ_CP089940.1 Protein Homology CDS 2958439 2959644 . - 0 ID=cds-WP_016169842.1;Parent=gene-LU631_RS15800;Dbxref=Genbank:WP_016169842.1;Name=WP_016169842.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012815698.1;locus_tag=LU631_RS15800;product=MFS transporter;protein_id=WP_016169842.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2960452 2961839 . - . ID=gene-LU631_RS15805;Name=LU631_RS15805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15805;old_locus_tag=LU631_15805;pseudo=true NZ_CP089940.1 Protein Homology CDS 2960452 2961839 . - 0 ID=cds-LU631_RS15805;Parent=gene-LU631_RS15805;Note=frameshifted;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802789.1;locus_tag=LU631_RS15805;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2962180 2963961 . + . ID=gene-LU631_RS15810;Name=LU631_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15810;old_locus_tag=LU631_15810 NZ_CP089940.1 Protein Homology CDS 2962180 2963961 . + 0 ID=cds-WP_016169843.1;Parent=gene-LU631_RS15810;Dbxref=Genbank:WP_016169843.1;Name=WP_016169843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118233.1;locus_tag=LU631_RS15810;product=sensor domain-containing phosphodiesterase;protein_id=WP_016169843.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2964066 2964452 . - . ID=gene-LU631_RS15815;Name=LU631_RS15815;end_range=2964452,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15815;old_locus_tag=LU631_15815;partial=true;pseudo=true;start_range=.,2964066 NZ_CP089940.1 Protein Homology CDS 2964066 2964452 . - 0 ID=cds-LU631_RS15815;Parent=gene-LU631_RS15815;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2964452,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594674.1;locus_tag=LU631_RS15815;partial=true;product=diguanylate cyclase;pseudo=true;start_range=.,2964066;transl_table=11 NZ_CP089940.1 RefSeq gene 2964484 2965923 . - . ID=gene-LU631_RS15820;Name=LU631_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15820;old_locus_tag=LU631_15820 NZ_CP089940.1 Protein Homology CDS 2964484 2965923 . - 0 ID=cds-WP_016169846.1;Parent=gene-LU631_RS15820;Dbxref=Genbank:WP_016169846.1;Name=WP_016169846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157390.1;locus_tag=LU631_RS15820;product=YdiU family protein;protein_id=WP_016169846.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2966015 2966758 . - . ID=gene-LU631_RS15825;Name=LU631_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15825;old_locus_tag=LU631_15825 NZ_CP089940.1 Protein Homology CDS 2966015 2966758 . - 0 ID=cds-WP_016169847.1;Parent=gene-LU631_RS15825;Dbxref=Genbank:WP_016169847.1;Name=WP_016169847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201913.1;locus_tag=LU631_RS15825;product=EAL domain-containing protein;protein_id=WP_016169847.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2967290 2967748 . - . ID=gene-LU631_RS15830;Name=LU631_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15830;old_locus_tag=LU631_15830 NZ_CP089940.1 Protein Homology CDS 2967290 2967748 . - 0 ID=cds-WP_016169848.1;Parent=gene-LU631_RS15830;Dbxref=Genbank:WP_016169848.1;Name=WP_016169848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169685.1;locus_tag=LU631_RS15830;product=NlpC/P60 family protein;protein_id=WP_016169848.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2967972 2968346 . - . ID=gene-LU631_RS15835;Name=LU631_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15835;old_locus_tag=LU631_15835 NZ_CP089940.1 GeneMarkS-2+ CDS 2967972 2968346 . - 0 ID=cds-WP_152664165.1;Parent=gene-LU631_RS15835;Dbxref=Genbank:WP_152664165.1;Name=WP_152664165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS15835;product=hypothetical protein;protein_id=WP_152664165.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2968447 2968992 . - . ID=gene-LU631_RS15840;Name=LU631_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15840;old_locus_tag=LU631_15840 NZ_CP089940.1 Protein Homology CDS 2968447 2968992 . - 0 ID=cds-WP_016169850.1;Parent=gene-LU631_RS15840;Dbxref=Genbank:WP_016169850.1;Name=WP_016169850.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003853255.1;locus_tag=LU631_RS15840;product=glutathione peroxidase;protein_id=WP_016169850.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2969746 2970264 . + . ID=gene-LU631_RS15845;Name=LU631_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15845;old_locus_tag=LU631_15845 NZ_CP089940.1 Protein Homology CDS 2969746 2970264 . + 0 ID=cds-WP_016169851.1;Parent=gene-LU631_RS15845;Dbxref=Genbank:WP_016169851.1;Name=WP_016169851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018650.1;locus_tag=LU631_RS15845;product=hypothetical protein;protein_id=WP_016169851.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2970888 2971579 . + . ID=gene-LU631_RS15850;Name=LU631_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15850;old_locus_tag=LU631_15850 NZ_CP089940.1 Protein Homology CDS 2970888 2971146 . + 0 ID=cds-WP_087949644.1;Parent=gene-LU631_RS15850;Dbxref=Genbank:WP_087949644.1;Name=WP_087949644.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU631_RS15850;product=IS1 family transposase;protein_id=WP_087949644.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 2971146 2971579 . + 2 ID=cds-WP_087949644.1;Parent=gene-LU631_RS15850;Dbxref=Genbank:WP_087949644.1;Name=WP_087949644.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU631_RS15850;product=IS1 family transposase;protein_id=WP_087949644.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2971526 2971795 . - . ID=gene-LU631_RS15855;Name=LU631_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15855;old_locus_tag=LU631_15855 NZ_CP089940.1 Protein Homology CDS 2971526 2971795 . - 0 ID=cds-WP_016169854.1;Parent=gene-LU631_RS15855;Dbxref=Genbank:WP_016169854.1;Name=WP_016169854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000951081.1;locus_tag=LU631_RS15855;product=DUF2724 domain-containing protein;protein_id=WP_016169854.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2972002 2972243 . - . ID=gene-LU631_RS15860;Name=LU631_RS15860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15860;old_locus_tag=LU631_15860;pseudo=true NZ_CP089940.1 Protein Homology CDS 2972002 2972243 . - 0 ID=cds-LU631_RS15860;Parent=gene-LU631_RS15860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082439.1;locus_tag=LU631_RS15860;product=Cox family DNA-binding protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2972360 2972647 . + . ID=gene-LU631_RS15865;Name=LU631_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15865;old_locus_tag=LU631_15865 NZ_CP089940.1 Protein Homology CDS 2972360 2972647 . + 0 ID=cds-WP_016169856.1;Parent=gene-LU631_RS15865;Dbxref=Genbank:WP_016169856.1;Name=WP_016169856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000020919.1;locus_tag=LU631_RS15865;product=helix-turn-helix transcriptional regulator;protein_id=WP_016169856.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2972738 2973726 . + . ID=gene-LU631_RS15870;Name=LU631_RS15870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15870;old_locus_tag=LU631_15870;pseudo=true NZ_CP089940.1 Protein Homology CDS 2972738 2973726 . + 0 ID=cds-LU631_RS15870;Parent=gene-LU631_RS15870;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016153650.1;locus_tag=LU631_RS15870;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2973862 2974161 . - . ID=gene-LU631_RS15875;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=LU631_RS15875;old_locus_tag=LU631_15875 NZ_CP089940.1 Protein Homology CDS 2973862 2974161 . - 0 ID=cds-WP_016169857.1;Parent=gene-LU631_RS15875;Dbxref=Genbank:WP_016169857.1;Name=WP_016169857.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=LU631_RS15875;product=integration host factor subunit alpha;protein_id=WP_016169857.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2974166 2976553 . - . ID=gene-LU631_RS15880;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=LU631_RS15880;old_locus_tag=LU631_15880 NZ_CP089940.1 Protein Homology CDS 2974166 2976553 . - 0 ID=cds-WP_016169858.1;Parent=gene-LU631_RS15880;Dbxref=Genbank:WP_016169858.1;Name=WP_016169858.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310447.1;locus_tag=LU631_RS15880;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_016169858.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2976569 2977552 . - . ID=gene-LU631_RS15885;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=LU631_RS15885;old_locus_tag=LU631_15885 NZ_CP089940.1 Protein Homology CDS 2976569 2977552 . - 0 ID=cds-WP_016169859.1;Parent=gene-LU631_RS15885;Dbxref=Genbank:WP_016169859.1;Name=WP_016169859.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=LU631_RS15885;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_016169859.1;transl_table=11 NZ_CP089940.1 cmsearch sequence_feature 2977636 2977759 . - . ID=id-NZ_CP089940.1:2977636..2977759;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP089940.1 RefSeq gene 2977709 2977750 . - . ID=gene-LU631_RS15890;Name=LU631_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15890;old_locus_tag=LU631_15890 NZ_CP089940.1 Protein Homology CDS 2977709 2977750 . - 0 ID=cds-WP_198292508.1;Parent=gene-LU631_RS15890;Dbxref=Genbank:WP_198292508.1;Name=WP_198292508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=LU631_RS15890;product=hypothetical protein;protein_id=WP_198292508.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2977882 2978238 . - . ID=gene-LU631_RS15895;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=LU631_RS15895;old_locus_tag=LU631_15895 NZ_CP089940.1 Protein Homology CDS 2977882 2978238 . - 0 ID=cds-WP_016169860.1;Parent=gene-LU631_RS15895;Dbxref=Genbank:WP_016169860.1;Name=WP_016169860.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=LU631_RS15895;product=50S ribosomal protein L20;protein_id=WP_016169860.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2978277 2978474 . - . ID=gene-LU631_RS15900;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=LU631_RS15900;old_locus_tag=LU631_15900 NZ_CP089940.1 Protein Homology CDS 2978277 2978474 . - 0 ID=cds-WP_006118955.1;Parent=gene-LU631_RS15900;Dbxref=Genbank:WP_006118955.1;Name=WP_006118955.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=LU631_RS15900;product=50S ribosomal protein L35;protein_id=WP_006118955.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2978571 2979122 . - . ID=gene-LU631_RS15905;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=LU631_RS15905;old_locus_tag=LU631_15905 NZ_CP089940.1 Protein Homology CDS 2978571 2979122 . - 0 ID=cds-WP_071598845.1;Parent=gene-LU631_RS15905;Dbxref=Genbank:WP_071598845.1;Name=WP_071598845.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=LU631_RS15905;product=translation initiation factor IF-3;protein_id=WP_071598845.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2979126 2981054 . - . ID=gene-LU631_RS15910;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=LU631_RS15910;old_locus_tag=LU631_15910 NZ_CP089940.1 Protein Homology CDS 2979126 2981054 . - 0 ID=cds-WP_016189436.1;Parent=gene-LU631_RS15910;Dbxref=Genbank:WP_016189436.1;Name=WP_016189436.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=LU631_RS15910;product=threonine--tRNA ligase;protein_id=WP_016189436.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2981994 2982763 . - . ID=gene-LU631_RS15915;Name=LU631_RS15915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15915;old_locus_tag=LU631_15915;pseudo=true NZ_CP089940.1 Protein Homology CDS 2981994 2982763 . - 0 ID=cds-LU631_RS15915;Parent=gene-LU631_RS15915;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS15915;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2983080 2983835 . - . ID=gene-LU631_RS15920;Name=LU631_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15920;old_locus_tag=LU631_15920 NZ_CP089940.1 Protein Homology CDS 2983080 2983835 . - 0 ID=cds-WP_016189439.1;Parent=gene-LU631_RS15920;Dbxref=Genbank:WP_016189439.1;Name=WP_016189439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357679.1;locus_tag=LU631_RS15920;product=DUF481 domain-containing protein;protein_id=WP_016189439.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2984038 2984996 . - . ID=gene-LU631_RS15925;Name=LU631_RS15925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15925;old_locus_tag=LU631_15925;pseudo=true NZ_CP089940.1 Protein Homology CDS 2984038 2984996 . - 0 ID=cds-LU631_RS15925;Parent=gene-LU631_RS15925;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=LU631_RS15925;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2985839 2986378 . - . ID=gene-LU631_RS15930;Name=LU631_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15930;old_locus_tag=LU631_15930 NZ_CP089940.1 Protein Homology CDS 2985839 2986378 . - 0 ID=cds-WP_016189443.1;Parent=gene-LU631_RS15930;Dbxref=Genbank:WP_016189443.1;Name=WP_016189443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441575.1;locus_tag=LU631_RS15930;product=YniB family protein;protein_id=WP_016189443.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2986542 2987179 . + . ID=gene-LU631_RS15935;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=pseudogene;locus_tag=LU631_RS15935;old_locus_tag=LU631_15935;pseudo=true NZ_CP089940.1 Protein Homology CDS 2986542 2987179 . + 0 ID=cds-LU631_RS15935;Parent=gene-LU631_RS15935;Note=frameshifted;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201897.1;locus_tag=LU631_RS15935;product=hexitol phosphatase HxpB;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2987320 2987910 . + . ID=gene-LU631_RS15940;Name=LU631_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15940;old_locus_tag=LU631_15940 NZ_CP089940.1 Protein Homology CDS 2987320 2987910 . + 0 ID=cds-WP_016189445.1;Parent=gene-LU631_RS15940;Dbxref=Genbank:WP_016189445.1;Name=WP_016189445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201896.1;locus_tag=LU631_RS15940;product=metal-dependent hydrolase;protein_id=WP_016189445.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2988072 2989469 . + . ID=gene-LU631_RS15945;Name=LU631_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15945;old_locus_tag=LU631_15945 NZ_CP089940.1 Protein Homology CDS 2988072 2989469 . + 0 ID=cds-WP_016189446.1;Parent=gene-LU631_RS15945;Dbxref=Genbank:WP_016189446.1;Name=WP_016189446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157362.1;locus_tag=LU631_RS15945;product=L-cystine transporter;protein_id=WP_016189446.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2989648 2990796 . + . ID=gene-LU631_RS15950;Name=LU631_RS15950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15950;old_locus_tag=LU631_15950;partial=true;pseudo=true;start_range=.,2989648 NZ_CP089940.1 Protein Homology CDS 2989648 2990796 . + 0 ID=cds-LU631_RS15950;Parent=gene-LU631_RS15950;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004096,GO:0020037;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964746.1;locus_tag=LU631_RS15950;partial=true;product=catalase;pseudo=true;start_range=.,2989648;transl_table=11 NZ_CP089940.1 RefSeq gene 2991102 2992142 . + . ID=gene-LU631_RS15955;Name=LU631_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15955;old_locus_tag=LU631_15955 NZ_CP089940.1 Protein Homology CDS 2991102 2992142 . + 0 ID=cds-WP_046371791.1-15;Parent=gene-LU631_RS15955;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS15955;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2992177 2993521 . - . ID=gene-LU631_RS15960;Name=LU631_RS15960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15960;old_locus_tag=LU631_15960;pseudo=true NZ_CP089940.1 Protein Homology CDS 2992177 2993521 . - 0 ID=cds-LU631_RS15960;Parent=gene-LU631_RS15960;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS15960;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2993647 2993982 . - . ID=gene-LU631_RS15965;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=LU631_RS15965;old_locus_tag=LU631_15965 NZ_CP089940.1 Protein Homology CDS 2993647 2993982 . - 0 ID=cds-WP_016189447.1;Parent=gene-LU631_RS15965;Dbxref=Genbank:WP_016189447.1;Name=WP_016189447.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668237.1;locus_tag=LU631_RS15965;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_016189447.1;transl_table=11 NZ_CP089940.1 RefSeq gene 2994734 2995561 . + . ID=gene-LU631_RS15970;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=LU631_RS15970;old_locus_tag=LU631_15970 NZ_CP089940.1 Protein Homology CDS 2994734 2995561 . + 0 ID=cds-WP_016189448.1;Parent=gene-LU631_RS15970;Dbxref=Genbank:WP_016189448.1;Name=WP_016189448.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226426.1;locus_tag=LU631_RS15970;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_016189448.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2995687 2996709 . - . ID=gene-LU631_RS15975;Name=LU631_RS15975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15975;old_locus_tag=LU631_15975;pseudo=true NZ_CP089940.1 Protein Homology CDS 2995687 2996709 . - 0 ID=cds-LU631_RS15975;Parent=gene-LU631_RS15975;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS15975;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2996838 2998045 . - . ID=gene-LU631_RS15980;Name=LU631_RS15980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15980;old_locus_tag=LU631_15980;pseudo=true NZ_CP089940.1 Protein Homology CDS 2996838 2998045 . - 0 ID=cds-LU631_RS15980;Parent=gene-LU631_RS15980;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS15980;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 2998666 2999619 . - . ID=gene-LU631_RS15985;Name=LU631_RS15985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS15985;old_locus_tag=LU631_15985;pseudo=true NZ_CP089940.1 Protein Homology CDS 2998666 2999619 . - 0 ID=cds-LU631_RS15985;Parent=gene-LU631_RS15985;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023351.2;locus_tag=LU631_RS15985;product=inverse autotransporter beta domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 2999508 2999840 . - . ID=gene-LU631_RS15990;Name=LU631_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15990;old_locus_tag=LU631_15990 NZ_CP089940.1 GeneMarkS-2+ CDS 2999508 2999840 . - 0 ID=cds-WP_087949650.1;Parent=gene-LU631_RS15990;Dbxref=Genbank:WP_087949650.1;Name=WP_087949650.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS15990;product=hypothetical protein;protein_id=WP_087949650.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3000584 3000847 . - . ID=gene-LU631_RS15995;Name=LU631_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS15995;old_locus_tag=LU631_15995 NZ_CP089940.1 GeneMarkS-2+ CDS 3000584 3000847 . - 0 ID=cds-WP_016189454.1;Parent=gene-LU631_RS15995;Dbxref=Genbank:WP_016189454.1;Name=WP_016189454.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS15995;product=hypothetical protein;protein_id=WP_016189454.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3001001 3001510 . + . ID=gene-LU631_RS16000;Name=LU631_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16000;old_locus_tag=LU631_16000 NZ_CP089940.1 Protein Homology CDS 3001001 3001510 . + 0 ID=cds-WP_152664166.1;Parent=gene-LU631_RS16000;Dbxref=Genbank:WP_152664166.1;Name=WP_152664166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201865.1;locus_tag=LU631_RS16000;product=SH3 domain-containing protein;protein_id=WP_152664166.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3001602 3002819 . + . ID=gene-LU631_RS16005;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=LU631_RS16005;old_locus_tag=LU631_16005 NZ_CP089940.1 Protein Homology CDS 3001602 3002819 . + 0 ID=cds-WP_016189456.1;Parent=gene-LU631_RS16005;Dbxref=Genbank:WP_016189456.1;Name=WP_016189456.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007892855.1;locus_tag=LU631_RS16005;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_016189456.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3002819 3004933 . + . ID=gene-LU631_RS16010;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=LU631_RS16010;old_locus_tag=LU631_16010 NZ_CP089940.1 Protein Homology CDS 3002819 3004933 . + 0 ID=cds-WP_016189457.1;Parent=gene-LU631_RS16010;Dbxref=Genbank:WP_016189457.1;Name=WP_016189457.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssM;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441594.1;locus_tag=LU631_RS16010;product=type VI secretion system membrane subunit TssM;protein_id=WP_016189457.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3004936 3005634 . + . ID=gene-LU631_RS16015;Name=tagF;gbkey=Gene;gene=tagF;gene_biotype=protein_coding;locus_tag=LU631_RS16015;old_locus_tag=LU631_16015 NZ_CP089940.1 Protein Homology CDS 3004936 3005634 . + 0 ID=cds-WP_016189458.1;Parent=gene-LU631_RS16015;Dbxref=Genbank:WP_016189458.1;Name=WP_016189458.1;gbkey=CDS;gene=tagF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668253.1;locus_tag=LU631_RS16015;product=type VI secretion system-associated protein TagF;protein_id=WP_016189458.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3005676 3006839 . + . ID=gene-LU631_RS16020;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=LU631_RS16020;old_locus_tag=LU631_16020 NZ_CP089940.1 Protein Homology CDS 3005676 3006839 . + 0 ID=cds-WP_016189459.1;Parent=gene-LU631_RS16020;Dbxref=Genbank:WP_016189459.1;Name=WP_016189459.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tagH;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201861.1;locus_tag=LU631_RS16020;product=type VI secretion system-associated FHA domain protein TagH;protein_id=WP_016189459.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3006836 3007612 . + . ID=gene-LU631_RS16025;Name=LU631_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16025;old_locus_tag=LU631_16025 NZ_CP089940.1 Protein Homology CDS 3006836 3007612 . + 0 ID=cds-WP_016189460.1;Parent=gene-LU631_RS16025;Dbxref=Genbank:WP_016189460.1;Name=WP_016189460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357631.1;locus_tag=LU631_RS16025;product=serine/threonine-protein phosphatase;protein_id=WP_016189460.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3007627 3008574 . + . ID=gene-LU631_RS16030;Name=LU631_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16030;old_locus_tag=LU631_16030 NZ_CP089940.1 Protein Homology CDS 3007627 3008574 . + 0 ID=cds-WP_016189461.1;Parent=gene-LU631_RS16030;Dbxref=Genbank:WP_016189461.1;Name=WP_016189461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010245838.1;locus_tag=LU631_RS16030;product=hypothetical protein;protein_id=WP_016189461.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3008624 3010042 . + . ID=gene-LU631_RS16035;Name=LU631_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16035;old_locus_tag=LU631_16035 NZ_CP089940.1 Protein Homology CDS 3008624 3010042 . + 0 ID=cds-WP_016189462.1;Parent=gene-LU631_RS16035;Dbxref=Genbank:WP_016189462.1;Name=WP_016189462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802079.1;locus_tag=LU631_RS16035;product=serine/threonine-protein kinase;protein_id=WP_016189462.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3010051 3010731 . - . ID=gene-LU631_RS16040;Name=LU631_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16040;old_locus_tag=LU631_16040 NZ_CP089940.1 Protein Homology CDS 3010051 3010731 . - 0 ID=cds-WP_016189463.1;Parent=gene-LU631_RS16040;Dbxref=Genbank:WP_016189463.1;Name=WP_016189463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157326.1;locus_tag=LU631_RS16040;product=gamma-glutamylcyclotransferase;protein_id=WP_016189463.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3011284 3012381 . + . ID=gene-LU631_RS16045;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=LU631_RS16045;old_locus_tag=LU631_16045 NZ_CP089940.1 Protein Homology CDS 3011284 3012381 . + 0 ID=cds-WP_016189465.1;Parent=gene-LU631_RS16045;Dbxref=Genbank:WP_016189465.1;Name=WP_016189465.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157319.1;locus_tag=LU631_RS16045;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_016189465.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3012455 3012853 . - . ID=gene-LU631_RS16050;Name=LU631_RS16050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16050;old_locus_tag=LU631_16050;partial=true;pseudo=true;start_range=.,3012455 NZ_CP089940.1 Protein Homology CDS 3012455 3012853 . - 0 ID=cds-LU631_RS16050;Parent=gene-LU631_RS16050;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544151.1;locus_tag=LU631_RS16050;partial=true;product=META domain-containing protein;pseudo=true;start_range=.,3012455;transl_table=11 NZ_CP089940.1 RefSeq gene 3012905 3013759 . - . ID=gene-LU631_RS16055;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=LU631_RS16055;old_locus_tag=LU631_16055 NZ_CP089940.1 Protein Homology CDS 3012905 3013759 . - 0 ID=cds-WP_016189467.1;Parent=gene-LU631_RS16055;Dbxref=Genbank:WP_016189467.1;Name=WP_016189467.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012848262.1;locus_tag=LU631_RS16055;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_016189467.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3013775 3014584 . - . ID=gene-LU631_RS16060;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=LU631_RS16060;old_locus_tag=LU631_16060 NZ_CP089940.1 Protein Homology CDS 3013775 3014584 . - 0 ID=cds-WP_040465265.1;Parent=gene-LU631_RS16060;Dbxref=Genbank:WP_040465265.1;Name=WP_040465265.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003850839.1;locus_tag=LU631_RS16060;product=invasion regulator SirB1;protein_id=WP_040465265.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3014840 3015670 . - . ID=gene-LU631_RS16065;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=LU631_RS16065;old_locus_tag=LU631_16065 NZ_CP089940.1 Protein Homology CDS 3014840 3015670 . - 0 ID=cds-WP_016189469.1;Parent=gene-LU631_RS16065;Dbxref=Genbank:WP_016189469.1;Name=WP_016189469.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172541.1;locus_tag=LU631_RS16065;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_016189469.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3015670 3016752 . - . ID=gene-LU631_RS16070;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=LU631_RS16070;old_locus_tag=LU631_16070 NZ_CP089940.1 Protein Homology CDS 3015670 3016752 . - 0 ID=cds-WP_016189470.1;Parent=gene-LU631_RS16070;Dbxref=Genbank:WP_016189470.1;Name=WP_016189470.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441609.1;locus_tag=LU631_RS16070;product=peptide chain release factor 1;protein_id=WP_016189470.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3016790 3018046 . - . ID=gene-LU631_RS16075;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=LU631_RS16075;old_locus_tag=LU631_16075 NZ_CP089940.1 Protein Homology CDS 3016790 3018046 . - 0 ID=cds-WP_016189471.1;Parent=gene-LU631_RS16075;Dbxref=Genbank:WP_016189471.1;Name=WP_016189471.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309742.1;locus_tag=LU631_RS16075;product=glutamyl-tRNA reductase;protein_id=WP_016189471.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3018273 3018896 . + . ID=gene-LU631_RS16080;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=LU631_RS16080;old_locus_tag=LU631_16080 NZ_CP089940.1 Protein Homology CDS 3018273 3018896 . + 0 ID=cds-WP_016189472.1;Parent=gene-LU631_RS16080;Dbxref=Genbank:WP_016189472.1;Name=WP_016189472.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802066.1;locus_tag=LU631_RS16080;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_016189472.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3018893 3019798 . + . ID=gene-LU631_RS16085;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=LU631_RS16085;old_locus_tag=LU631_16085 NZ_CP089940.1 Protein Homology CDS 3018893 3019798 . + 0 ID=cds-WP_016189473.1;Parent=gene-LU631_RS16085;Dbxref=Genbank:WP_016189473.1;Name=WP_016189473.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201848.1;locus_tag=LU631_RS16085;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_016189473.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3019928 3020875 . + . ID=gene-LU631_RS16090;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=LU631_RS16090;old_locus_tag=LU631_16090 NZ_CP089940.1 Protein Homology CDS 3019928 3020875 . + 0 ID=cds-WP_016189474.1;Parent=gene-LU631_RS16090;Dbxref=Genbank:WP_016189474.1;Name=WP_016189474.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=LU631_RS16090;product=ribose-phosphate diphosphokinase;protein_id=WP_016189474.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3021091 3021471 . + . ID=gene-LU631_RS16095;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS16095;old_locus_tag=LU631_16095 NZ_CP089940.1 Protein Homology CDS 3021091 3021471 . + 0 ID=cds-WP_233482030.1;Parent=gene-LU631_RS16095;Dbxref=Genbank:WP_233482030.1;Name=WP_233482030.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS16095;product=IS200/IS605 family transposase;protein_id=WP_233482030.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3022009 3022290 . - . ID=gene-LU631_RS16100;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=LU631_RS16100;old_locus_tag=LU631_16100 NZ_CP089940.1 Protein Homology CDS 3022009 3022290 . - 0 ID=cds-WP_016189476.1;Parent=gene-LU631_RS16100;Dbxref=Genbank:WP_016189476.1;Name=WP_016189476.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007892909.1;locus_tag=LU631_RS16100;product=stress-induced protein YchH;protein_id=WP_016189476.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3022542 3023129 . + . ID=gene-LU631_RS16105;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=LU631_RS16105;old_locus_tag=LU631_16105 NZ_CP089940.1 Protein Homology CDS 3022542 3023129 . + 0 ID=cds-WP_016189477.1;Parent=gene-LU631_RS16105;Dbxref=Genbank:WP_016189477.1;Name=WP_016189477.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802060.1;locus_tag=LU631_RS16105;product=aminoacyl-tRNA hydrolase;protein_id=WP_016189477.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3023233 3023457 . + . ID=gene-LU631_RS16110;Name=LU631_RS16110;end_range=3023457,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16110;old_locus_tag=LU631_16110;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3023233 3023457 . + 0 ID=cds-LU631_RS16110;Parent=gene-LU631_RS16110;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3023457,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU631_RS16110;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3024092 3024346 . + . ID=gene-LU631_RS16115;Name=LU631_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16115;old_locus_tag=LU631_16115 NZ_CP089940.1 GeneMarkS-2+ CDS 3024092 3024346 . + 0 ID=cds-WP_016189480.1;Parent=gene-LU631_RS16115;Dbxref=Genbank:WP_016189480.1;Name=WP_016189480.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS16115;product=hypothetical protein;protein_id=WP_016189480.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3024468 3024950 . - . ID=gene-LU631_RS16120;Name=LU631_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16120;old_locus_tag=LU631_16120 NZ_CP089940.1 Protein Homology CDS 3024468 3024950 . - 0 ID=cds-WP_016189481.1;Parent=gene-LU631_RS16120;Dbxref=Genbank:WP_016189481.1;Name=WP_016189481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006707192.1;locus_tag=LU631_RS16120;product=hypothetical protein;protein_id=WP_016189481.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3025219 3028112 . - . ID=gene-LU631_RS16125;Name=LU631_RS16125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16125;old_locus_tag=LU631_16125;pseudo=true NZ_CP089940.1 Protein Homology CDS 3025219 3028112 . - 0 ID=cds-LU631_RS16125;Parent=gene-LU631_RS16125;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527814.1;locus_tag=LU631_RS16125;product=Tn3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3028283 3028798 . + . ID=gene-LU631_RS16130;Name=LU631_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16130;old_locus_tag=LU631_16130 NZ_CP089940.1 Protein Homology CDS 3028283 3028798 . + 0 ID=cds-WP_040465354.1;Parent=gene-LU631_RS16130;Dbxref=Genbank:WP_040465354.1;Name=WP_040465354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212865.1;locus_tag=LU631_RS16130;product=recombinase family protein;protein_id=WP_040465354.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3028884 3029543 . + . ID=gene-LU631_RS26120;Name=LU631_RS26120;end_range=3029543,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS26120;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3028884 3029543 . + 0 ID=cds-LU631_RS26120;Parent=gene-LU631_RS26120;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3029543,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26120;partial=true;product=transposase zinc-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3029539 3030108 . + . ID=gene-LU631_RS26125;Name=LU631_RS26125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26125 NZ_CP089940.1 Protein Homology CDS 3029539 3030108 . + 0 ID=cds-WP_267958437.1;Parent=gene-LU631_RS26125;Dbxref=Genbank:WP_267958437.1;Name=WP_267958437.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26125;product=transposase;protein_id=WP_267958437.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3030337 3031560 . + . ID=gene-LU631_RS16140;Name=LU631_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16140;old_locus_tag=LU631_16140 NZ_CP089940.1 Protein Homology CDS 3030337 3031560 . + 0 ID=cds-WP_046371907.1;Parent=gene-LU631_RS16140;Dbxref=Genbank:WP_046371907.1;Name=WP_046371907.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU631_RS16140;product=IS91 family transposase;protein_id=WP_046371907.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3031997 3032401 . - . ID=gene-LU631_RS16145;Name=LU631_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16145;old_locus_tag=LU631_16145 NZ_CP089940.1 GeneMarkS-2+ CDS 3031997 3032401 . - 0 ID=cds-WP_016189485.1;Parent=gene-LU631_RS16145;Dbxref=Genbank:WP_016189485.1;Name=WP_016189485.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS16145;product=hypothetical protein;protein_id=WP_016189485.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3033226 3033561 . + . ID=gene-LU631_RS16150;Name=LU631_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16150;old_locus_tag=LU631_16150 NZ_CP089940.1 GeneMarkS-2+ CDS 3033226 3033561 . + 0 ID=cds-WP_052734695.1-10;Parent=gene-LU631_RS16150;Dbxref=Genbank:WP_052734695.1;Name=WP_052734695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS16150;product=hypothetical protein;protein_id=WP_052734695.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3033570 3034340 . + . ID=gene-LU631_RS26130;Name=LU631_RS26130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26130 NZ_CP089940.1 Protein Homology CDS 3033570 3034340 . + 0 ID=cds-WP_267921497.1-6;Parent=gene-LU631_RS26130;Dbxref=Genbank:WP_267921497.1;Name=WP_267921497.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26130;product=transposase zinc-binding domain-containing protein;protein_id=WP_267921497.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3034352 3034783 . + . ID=gene-LU631_RS26135;Name=LU631_RS26135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26135 NZ_CP089940.1 Protein Homology CDS 3034352 3034783 . + 0 ID=cds-WP_267958438.1;Parent=gene-LU631_RS26135;Dbxref=Genbank:WP_267958438.1;Name=WP_267958438.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26135;product=transposase;protein_id=WP_267958438.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3035042 3035152 . + . ID=gene-LU631_RS16160;Name=LU631_RS16160;end_range=3035152,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16160;old_locus_tag=LU631_16160;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3035042 3035152 . + 0 ID=cds-LU631_RS16160;Parent=gene-LU631_RS16160;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3035152,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011623220.1;locus_tag=LU631_RS16160;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3035165 3035371 . - . ID=gene-LU631_RS16165;Name=LU631_RS16165;end_range=3035371,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16165;old_locus_tag=LU631_16165;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3035165 3035371 . - 0 ID=cds-LU631_RS16165;Parent=gene-LU631_RS16165;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=3035371,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=LU631_RS16165;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3035445 3036565 . + . ID=gene-LU631_RS16170;Name=LU631_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16170;old_locus_tag=LU631_16170 NZ_CP089940.1 Protein Homology CDS 3035445 3035703 . + 0 ID=cds-WP_152664168.1;Parent=gene-LU631_RS16170;Dbxref=Genbank:WP_152664168.1;Name=WP_152664168.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS16170;product=IS3 family transposase;protein_id=WP_152664168.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 3035703 3036565 . + 2 ID=cds-WP_152664168.1;Parent=gene-LU631_RS16170;Dbxref=Genbank:WP_152664168.1;Name=WP_152664168.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS16170;product=IS3 family transposase;protein_id=WP_152664168.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3036591 3037565 . - . ID=gene-LU631_RS16175;Name=LU631_RS16175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16175;old_locus_tag=LU631_16175;partial=true;pseudo=true;start_range=.,3036591 NZ_CP089940.1 Protein Homology CDS 3036591 3037565 . - 0 ID=cds-LU631_RS16175;Parent=gene-LU631_RS16175;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612097.1;locus_tag=LU631_RS16175;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,3036591;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3037839 3038150 . - . ID=gene-LU631_RS16180;Name=LU631_RS16180;end_range=3038150,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16180;old_locus_tag=LU631_16180;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3037839 3038150 . - 0 ID=cds-LU631_RS16180;Parent=gene-LU631_RS16180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=3038150,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS16180;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3038165 3039487 . - . ID=gene-LU631_RS16185;Name=LU631_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16185;old_locus_tag=LU631_16185 NZ_CP089940.1 Protein Homology CDS 3038165 3039487 . - 0 ID=cds-WP_046371912.1;Parent=gene-LU631_RS16185;Dbxref=Genbank:WP_046371912.1;Name=WP_046371912.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS16185;product=IS4 family transposase;protein_id=WP_046371912.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3039571 3040399 . - . ID=gene-LU631_RS16190;Name=LU631_RS16190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16190;old_locus_tag=LU631_16190;partial=true;pseudo=true;start_range=.,3039571 NZ_CP089940.1 Protein Homology CDS 3039571 3040399 . - 0 ID=cds-LU631_RS16190;Parent=gene-LU631_RS16190;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS16190;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,3039571;transl_table=11 NZ_CP089940.1 RefSeq gene 3040598 3041029 . - . ID=gene-LU631_RS16195;Name=LU631_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16195;old_locus_tag=LU631_16195 NZ_CP089940.1 GeneMarkS-2+ CDS 3040598 3041029 . - 0 ID=cds-WP_016189487.1;Parent=gene-LU631_RS16195;Dbxref=Genbank:WP_016189487.1;Name=WP_016189487.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS16195;product=hypothetical protein;protein_id=WP_016189487.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3041023 3041622 . - . ID=gene-LU631_RS16200;Name=LU631_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16200;old_locus_tag=LU631_16200 NZ_CP089940.1 Protein Homology CDS 3041023 3041622 . - 0 ID=cds-WP_016189488.1;Parent=gene-LU631_RS16200;Dbxref=Genbank:WP_016189488.1;Name=WP_016189488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192547.1;locus_tag=LU631_RS16200;product=peptidoglycan recognition family protein;protein_id=WP_016189488.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3041650 3042132 . - . ID=gene-LU631_RS16205;Name=LU631_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16205;old_locus_tag=LU631_16205 NZ_CP089940.1 Protein Homology CDS 3041650 3042132 . - 0 ID=cds-WP_016189489.1;Parent=gene-LU631_RS16205;Dbxref=Genbank:WP_016189489.1;Name=WP_016189489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=LU631_RS16205;product=type VI secretion system tube protein Hcp;protein_id=WP_016189489.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3042162 3042740 . - . ID=gene-LU631_RS16210;Name=LU631_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16210;old_locus_tag=LU631_16210 NZ_CP089940.1 Protein Homology CDS 3042162 3042740 . - 0 ID=cds-WP_016189490.1;Parent=gene-LU631_RS16210;Dbxref=Genbank:WP_016189490.1;Name=WP_016189490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014611549.1;locus_tag=LU631_RS16210;product=recombinase family protein;protein_id=WP_016189490.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3043226 3043540 . + . ID=gene-LU631_RS16215;Name=LU631_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16215;old_locus_tag=LU631_16215 NZ_CP089940.1 Protein Homology CDS 3043226 3043540 . + 0 ID=cds-WP_016189491.1;Parent=gene-LU631_RS16215;Dbxref=Genbank:WP_016189491.1;Name=WP_016189491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831717.1;locus_tag=LU631_RS16215;product=hypothetical protein;protein_id=WP_016189491.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3043537 3044358 . - . ID=gene-LU631_RS16220;Name=LU631_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16220;old_locus_tag=LU631_16220 NZ_CP089940.1 Protein Homology CDS 3043537 3044358 . - 0 ID=cds-WP_016189492.1;Parent=gene-LU631_RS16220;Dbxref=Genbank:WP_016189492.1;Name=WP_016189492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862880.1;locus_tag=LU631_RS16220;product=DUF4225 domain-containing protein;protein_id=WP_016189492.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3044726 3044950 . - . ID=gene-LU631_RS16225;Name=LU631_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16225;old_locus_tag=LU631_16225 NZ_CP089940.1 GeneMarkS-2+ CDS 3044726 3044950 . - 0 ID=cds-WP_016189493.1;Parent=gene-LU631_RS16225;Dbxref=Genbank:WP_016189493.1;Name=WP_016189493.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS16225;product=hypothetical protein;protein_id=WP_016189493.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3045079 3045204 . - . ID=gene-LU631_RS16230;Name=LU631_RS16230;end_range=3045204,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16230;old_locus_tag=LU631_16230;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3045079 3045204 . - 0 ID=cds-LU631_RS16230;Parent=gene-LU631_RS16230;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3045204,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191786.1;locus_tag=LU631_RS16230;partial=true;product=tail fiber assembly protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3045262 3046300 . - . ID=gene-LU631_RS16235;Name=LU631_RS16235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16235;old_locus_tag=LU631_16235;pseudo=true NZ_CP089940.1 Protein Homology CDS 3045262 3046300 . - 0 ID=cds-LU631_RS16235;Parent=gene-LU631_RS16235;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011073373.1;locus_tag=LU631_RS16235;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3046487 3046627 . + . ID=gene-LU631_RS16240;Name=xisR;gbkey=Gene;gene=xisR;gene_biotype=pseudogene;locus_tag=LU631_RS16240;old_locus_tag=LU631_16240;partial=true;pseudo=true;start_range=.,3046487 NZ_CP089940.1 Protein Homology CDS 3046487 3046627 . + 0 ID=cds-LU631_RS16240;Parent=gene-LU631_RS16240;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=xisR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015386533.1;locus_tag=LU631_RS16240;partial=true;product=excisionase family protein;pseudo=true;start_range=.,3046487;transl_table=11 NZ_CP089940.1 RefSeq gene 3047441 3047752 . - . ID=gene-LU631_RS16245;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=LU631_RS16245;old_locus_tag=LU631_16245 NZ_CP089940.1 Protein Homology CDS 3047441 3047752 . - 0 ID=cds-WP_016189495.1;Parent=gene-LU631_RS16245;Dbxref=Genbank:WP_016189495.1;Name=WP_016189495.1;Ontology_term=GO:0001539,GO:0005198;gbkey=CDS;gene=fliE;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441711.1;locus_tag=LU631_RS16245;product=flagellar hook-basal body complex protein FliE;protein_id=WP_016189495.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3047992 3049713 . + . ID=gene-LU631_RS16250;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=LU631_RS16250;old_locus_tag=LU631_16250 NZ_CP089940.1 Protein Homology CDS 3047992 3049713 . + 0 ID=cds-WP_016189496.1;Parent=gene-LU631_RS16250;Dbxref=Genbank:WP_016189496.1;Name=WP_016189496.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157178.1;locus_tag=LU631_RS16250;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_016189496.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3049710 3050702 . + . ID=gene-LU631_RS16255;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=LU631_RS16255;old_locus_tag=LU631_16255 NZ_CP089940.1 Protein Homology CDS 3049710 3050702 . + 0 ID=cds-WP_016189497.1;Parent=gene-LU631_RS16255;Dbxref=Genbank:WP_016189497.1;Name=WP_016189497.1;Ontology_term=GO:0001539,GO:0006935,GO:0005198,GO:0009433;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum basal body%2C C ring|0009433||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854483.1;locus_tag=LU631_RS16255;product=flagellar motor switch protein FliG;protein_id=WP_016189497.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3050695 3051387 . + . ID=gene-LU631_RS16260;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=LU631_RS16260;old_locus_tag=LU631_16260 NZ_CP089940.1 Protein Homology CDS 3050695 3051387 . + 0 ID=cds-WP_016189498.1;Parent=gene-LU631_RS16260;Dbxref=Genbank:WP_016189498.1;Name=WP_016189498.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441714.1;locus_tag=LU631_RS16260;product=flagellar assembly protein FliH;protein_id=WP_016189498.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3051387 3052748 . + . ID=gene-LU631_RS16265;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=LU631_RS16265;old_locus_tag=LU631_16265 NZ_CP089940.1 Protein Homology CDS 3051387 3052748 . + 0 ID=cds-WP_016189499.1;Parent=gene-LU631_RS16265;Dbxref=Genbank:WP_016189499.1;Name=WP_016189499.1;Ontology_term=GO:0001539,GO:0016887,GO:0009288;gbkey=CDS;gene=fliI;go_component=bacterial-type flagellum|0009288||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668406.1;locus_tag=LU631_RS16265;product=flagellar protein export ATPase FliI;protein_id=WP_016189499.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3052764 3053210 . + . ID=gene-LU631_RS16270;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=LU631_RS16270;old_locus_tag=LU631_16270 NZ_CP089940.1 Protein Homology CDS 3052764 3053210 . + 0 ID=cds-WP_016189500.1;Parent=gene-LU631_RS16270;Dbxref=Genbank:WP_016189500.1;Name=WP_016189500.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441716.1;locus_tag=LU631_RS16270;product=flagellar export protein FliJ;protein_id=WP_016189500.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3053207 3054532 . + . ID=gene-LU631_RS16275;Name=LU631_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16275;old_locus_tag=LU631_16275 NZ_CP089940.1 Protein Homology CDS 3053207 3054532 . + 0 ID=cds-WP_016189501.1;Parent=gene-LU631_RS16275;Dbxref=Genbank:WP_016189501.1;Name=WP_016189501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202678.1;locus_tag=LU631_RS16275;product=flagellar hook-length control protein FliK;protein_id=WP_016189501.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3054685 3055167 . + . ID=gene-LU631_RS16280;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=LU631_RS16280;old_locus_tag=LU631_16280 NZ_CP089940.1 Protein Homology CDS 3054685 3055167 . + 0 ID=cds-WP_016189502.1;Parent=gene-LU631_RS16280;Dbxref=Genbank:WP_016189502.1;Name=WP_016189502.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008105400.1;locus_tag=LU631_RS16280;product=flagellar basal body-associated protein FliL;protein_id=WP_016189502.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3055172 3056179 . + . ID=gene-LU631_RS16285;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=LU631_RS16285;old_locus_tag=LU631_16285 NZ_CP089940.1 Protein Homology CDS 3055172 3056179 . + 0 ID=cds-WP_016189503.1;Parent=gene-LU631_RS16285;Dbxref=Genbank:WP_016189503.1;Name=WP_016189503.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358287.1;locus_tag=LU631_RS16285;product=flagellar motor switch protein FliM;protein_id=WP_016189503.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3056172 3056576 . + . ID=gene-LU631_RS16290;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=LU631_RS16290;old_locus_tag=LU631_16290 NZ_CP089940.1 Protein Homology CDS 3056172 3056576 . + 0 ID=cds-WP_016189504.1;Parent=gene-LU631_RS16290;Dbxref=Genbank:WP_016189504.1;Name=WP_016189504.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157163.1;locus_tag=LU631_RS16290;product=flagellar motor switch protein FliN;protein_id=WP_016189504.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3056578 3056973 . + . ID=gene-LU631_RS16295;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=LU631_RS16295;old_locus_tag=LU631_16295 NZ_CP089940.1 Protein Homology CDS 3056578 3056973 . + 0 ID=cds-WP_016189505.1;Parent=gene-LU631_RS16295;Dbxref=Genbank:WP_016189505.1;Name=WP_016189505.1;Ontology_term=GO:0044781;gbkey=CDS;gene=fliO;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358289.1;locus_tag=LU631_RS16295;product=flagellar biosynthetic protein FliO;protein_id=WP_016189505.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3056970 3057704 . + . ID=gene-LU631_RS16300;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=LU631_RS16300;old_locus_tag=LU631_16300 NZ_CP089940.1 Protein Homology CDS 3056970 3057704 . + 0 ID=cds-WP_016189506.1;Parent=gene-LU631_RS16300;Dbxref=Genbank:WP_016189506.1;Name=WP_016189506.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0001539;gbkey=CDS;gene=fliP;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441722.1;locus_tag=LU631_RS16300;product=flagellar type III secretion system pore protein FliP;protein_id=WP_016189506.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3057846 3058115 . + . ID=gene-LU631_RS16305;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=LU631_RS16305;old_locus_tag=LU631_16305 NZ_CP089940.1 Protein Homology CDS 3057846 3058115 . + 0 ID=cds-WP_016189507.1;Parent=gene-LU631_RS16305;Dbxref=Genbank:WP_016189507.1;Name=WP_016189507.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliQ;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202684.1;locus_tag=LU631_RS16305;product=flagellar biosynthesis protein FliQ;protein_id=WP_016189507.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3058115 3058900 . + . ID=gene-LU631_RS16310;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=LU631_RS16310;old_locus_tag=LU631_16310 NZ_CP089940.1 Protein Homology CDS 3058115 3058900 . + 0 ID=cds-WP_016189508.1;Parent=gene-LU631_RS16310;Dbxref=Genbank:WP_016189508.1;Name=WP_016189508.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544014.1;locus_tag=LU631_RS16310;product=flagellar biosynthetic protein FliR;protein_id=WP_016189508.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3059546 3060181 . + . ID=gene-LU631_RS16315;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=LU631_RS16315;old_locus_tag=LU631_16315 NZ_CP089940.1 Protein Homology CDS 3059546 3060181 . + 0 ID=cds-WP_016189509.1;Parent=gene-LU631_RS16315;Dbxref=Genbank:WP_016189509.1;Name=WP_016189509.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509559.1;locus_tag=LU631_RS16315;product=transcriptional regulator RcsA;protein_id=WP_016189509.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3060373 3060969 . + . ID=gene-LU631_RS16320;Name=LU631_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16320;old_locus_tag=LU631_16320 NZ_CP089940.1 Protein Homology CDS 3060373 3060969 . + 0 ID=cds-WP_051124318.1;Parent=gene-LU631_RS16320;Dbxref=Genbank:WP_051124318.1;Name=WP_051124318.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF014281.2;locus_tag=LU631_RS16320;product=Tar ligand binding domain-containing protein;protein_id=WP_051124318.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3060992 3061147 . + . ID=gene-LU631_RS16325;Name=LU631_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16325;old_locus_tag=LU631_16325 NZ_CP089940.1 GeneMarkS-2+ CDS 3060992 3061147 . + 0 ID=cds-WP_198292503.1;Parent=gene-LU631_RS16325;Dbxref=Genbank:WP_198292503.1;Name=WP_198292503.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS16325;product=hypothetical protein;protein_id=WP_198292503.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3061265 3061907 . + . ID=gene-LU631_RS16330;Name=LU631_RS16330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16330;old_locus_tag=LU631_16330;partial=true;pseudo=true;start_range=.,3061265 NZ_CP089940.1 Protein Homology CDS 3061265 3061907 . + 0 ID=cds-LU631_RS16330;Parent=gene-LU631_RS16330;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041744100.1;locus_tag=LU631_RS16330;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;start_range=.,3061265;transl_table=11 NZ_CP089940.1 RefSeq gene 3061969 3063177 . + . ID=gene-LU631_RS16335;Name=LU631_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16335;old_locus_tag=LU631_16335 NZ_CP089940.1 Protein Homology CDS 3061969 3063177 . + 0 ID=cds-WP_046371915.1;Parent=gene-LU631_RS16335;Dbxref=Genbank:WP_046371915.1;Name=WP_046371915.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS16335;product=IS256 family transposase;protein_id=WP_046371915.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3063389 3064429 . - . ID=gene-LU631_RS16340;Name=LU631_RS16340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16340;old_locus_tag=LU631_16340;pseudo=true NZ_CP089940.1 Protein Homology CDS 3063389 3064429 . - 0 ID=cds-LU631_RS16340;Parent=gene-LU631_RS16340;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS16340;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3064540 3064986 . - . ID=gene-LU631_RS16345;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS16345;old_locus_tag=LU631_16345 NZ_CP089940.1 Protein Homology CDS 3064540 3064986 . - 0 ID=cds-WP_040465270.1;Parent=gene-LU631_RS16345;Dbxref=Genbank:WP_040465270.1;Name=WP_040465270.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192470.1;locus_tag=LU631_RS16345;product=IS200/IS605 family transposase;protein_id=WP_040465270.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3065855 3066521 . + . ID=gene-LU631_RS16350;Name=LU631_RS16350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16350;old_locus_tag=LU631_16350;partial=true;pseudo=true;start_range=.,3065855 NZ_CP089940.1 Protein Homology CDS 3065855 3066521 . + 0 ID=cds-LU631_RS16350;Parent=gene-LU631_RS16350;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=LU631_RS16350;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,3065855;transl_table=11 NZ_CP089940.1 RefSeq gene 3066683 3067379 . + . ID=gene-LU631_RS16355;Name=LU631_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16355;old_locus_tag=LU631_16355 NZ_CP089940.1 Protein Homology CDS 3066683 3066936 . + 0 ID=cds-WP_233481923.1;Parent=gene-LU631_RS16355;Dbxref=Genbank:WP_233481923.1;Name=WP_233481923.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS16355;product=IS1 family transposase;protein_id=WP_233481923.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 3066935 3067379 . + 1 ID=cds-WP_233481923.1;Parent=gene-LU631_RS16355;Dbxref=Genbank:WP_233481923.1;Name=WP_233481923.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS16355;product=IS1 family transposase;protein_id=WP_233481923.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3067791 3068228 . - . ID=gene-LU631_RS16360;Name=LU631_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16360;old_locus_tag=LU631_16360 NZ_CP089940.1 Protein Homology CDS 3067791 3068228 . - 0 ID=cds-WP_016189515.1;Parent=gene-LU631_RS16360;Dbxref=Genbank:WP_016189515.1;Name=WP_016189515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001167369.1;locus_tag=LU631_RS16360;product=lysozyme;protein_id=WP_016189515.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3068215 3068547 . - . ID=gene-LU631_RS16365;Name=LU631_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16365;old_locus_tag=LU631_16365 NZ_CP089940.1 Protein Homology CDS 3068215 3068547 . - 0 ID=cds-WP_016189516.1;Parent=gene-LU631_RS16365;Dbxref=Genbank:WP_016189516.1;Name=WP_016189516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246753.1;locus_tag=LU631_RS16365;product=phage holin family protein;protein_id=WP_016189516.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3068832 3071384 . - . ID=gene-LU631_RS16370;Name=LU631_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16370;old_locus_tag=LU631_16370 NZ_CP089940.1 Protein Homology CDS 3068832 3071384 . - 0 ID=cds-WP_016189517.1;Parent=gene-LU631_RS16370;Dbxref=Genbank:WP_016189517.1;Name=WP_016189517.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012907.2;locus_tag=LU631_RS16370;product=lytic polysaccharide monooxygenase;protein_id=WP_016189517.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3072485 3073387 . + . ID=gene-LU631_RS16375;Name=LU631_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16375;old_locus_tag=LU631_16375 NZ_CP089940.1 Protein Homology CDS 3072485 3073387 . + 0 ID=cds-WP_016189518.1;Parent=gene-LU631_RS16375;Dbxref=Genbank:WP_016189518.1;Name=WP_016189518.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012354.2;locus_tag=LU631_RS16375;product=LysR family transcriptional regulator;protein_id=WP_016189518.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3074008 3074973 . - . ID=gene-LU631_RS16380;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=LU631_RS16380;old_locus_tag=LU631_16380 NZ_CP089940.1 Protein Homology CDS 3074008 3074973 . - 0 ID=cds-WP_016189520.1;Parent=gene-LU631_RS16380;Dbxref=Genbank:WP_016189520.1;Name=WP_016189520.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001404987.1;locus_tag=LU631_RS16380;product=flagellar hook-associated protein FlgL;protein_id=WP_016189520.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3074991 3076643 . - . ID=gene-LU631_RS16385;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=LU631_RS16385;old_locus_tag=LU631_16385 NZ_CP089940.1 Protein Homology CDS 3074991 3076643 . - 0 ID=cds-WP_016189521.1;Parent=gene-LU631_RS16385;Dbxref=Genbank:WP_016189521.1;Name=WP_016189521.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543984.1;locus_tag=LU631_RS16385;product=flagellar hook-associated protein FlgK;protein_id=WP_016189521.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3076885 3077823 . - . ID=gene-LU631_RS16390;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=LU631_RS16390;old_locus_tag=LU631_16390 NZ_CP089940.1 Protein Homology CDS 3076885 3077823 . - 0 ID=cds-WP_016189522.1;Parent=gene-LU631_RS16390;Dbxref=Genbank:WP_016189522.1;Name=WP_016189522.1;Ontology_term=GO:0001539,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668447.1;locus_tag=LU631_RS16390;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_016189522.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3077823 3078920 . - . ID=gene-LU631_RS16395;Name=LU631_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16395;old_locus_tag=LU631_16395 NZ_CP089940.1 Protein Homology CDS 3077823 3078920 . - 0 ID=cds-WP_016189523.1;Parent=gene-LU631_RS16395;Dbxref=Genbank:WP_016189523.1;Name=WP_016189523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017348061.1;locus_tag=LU631_RS16395;product=flagellar basal body P-ring protein FlgI;protein_id=WP_016189523.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3078930 3079631 . - . ID=gene-LU631_RS16400;Name=LU631_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16400;old_locus_tag=LU631_16400 NZ_CP089940.1 Protein Homology CDS 3078930 3079631 . - 0 ID=cds-WP_016189524.1;Parent=gene-LU631_RS16400;Dbxref=Genbank:WP_016189524.1;Name=WP_016189524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025353.1;locus_tag=LU631_RS16400;product=flagellar basal body L-ring protein FlgH;protein_id=WP_016189524.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3079696 3080478 . - . ID=gene-LU631_RS16405;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=LU631_RS16405;old_locus_tag=LU631_16405 NZ_CP089940.1 Protein Homology CDS 3079696 3080478 . - 0 ID=cds-WP_016189525.1;Parent=gene-LU631_RS16405;Dbxref=Genbank:WP_016189525.1;Name=WP_016189525.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460150.1;locus_tag=LU631_RS16405;product=flagellar basal-body rod protein FlgG;protein_id=WP_016189525.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3080496 3081251 . - . ID=gene-LU631_RS16410;Name=LU631_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16410;old_locus_tag=LU631_16410 NZ_CP089940.1 Protein Homology CDS 3080496 3081251 . - 0 ID=cds-WP_016189526.1;Parent=gene-LU631_RS16410;Dbxref=Genbank:WP_016189526.1;Name=WP_016189526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415595.1;locus_tag=LU631_RS16410;product=flagellar basal body rod protein FlgF;protein_id=WP_016189526.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3081273 3082502 . - . ID=gene-LU631_RS16415;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=LU631_RS16415;old_locus_tag=LU631_16415 NZ_CP089940.1 Protein Homology CDS 3081273 3082502 . - 0 ID=cds-WP_016189527.1;Parent=gene-LU631_RS16415;Dbxref=Genbank:WP_016189527.1;Name=WP_016189527.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885873.1;locus_tag=LU631_RS16415;product=flagellar hook protein FlgE;protein_id=WP_016189527.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3082530 3083213 . - . ID=gene-LU631_RS16420;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=LU631_RS16420;old_locus_tag=LU631_16420 NZ_CP089940.1 Protein Homology CDS 3082530 3083213 . - 0 ID=cds-WP_016189528.1;Parent=gene-LU631_RS16420;Dbxref=Genbank:WP_016189528.1;Name=WP_016189528.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441761.1;locus_tag=LU631_RS16420;product=flagellar hook assembly protein FlgD;protein_id=WP_016189528.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3083225 3083629 . - . ID=gene-LU631_RS16425;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=LU631_RS16425;old_locus_tag=LU631_16425 NZ_CP089940.1 Protein Homology CDS 3083225 3083629 . - 0 ID=cds-WP_016189529.1;Parent=gene-LU631_RS16425;Dbxref=Genbank:WP_016189529.1;Name=WP_016189529.1;Ontology_term=GO:0001539,GO:0005198,GO:0009425;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309479.1;locus_tag=LU631_RS16425;product=flagellar basal body rod protein FlgC;protein_id=WP_016189529.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3083636 3084046 . - . ID=gene-LU631_RS16430;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=LU631_RS16430;old_locus_tag=LU631_16430 NZ_CP089940.1 Protein Homology CDS 3083636 3084046 . - 0 ID=cds-WP_016189530.1;Parent=gene-LU631_RS16430;Dbxref=Genbank:WP_016189530.1;Name=WP_016189530.1;Ontology_term=GO:0001539,GO:0005198,GO:0009429;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C proximal rod|0009429||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013575163.1;locus_tag=LU631_RS16430;product=flagellar basal body rod protein FlgB;protein_id=WP_016189530.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3084203 3084871 . + . ID=gene-LU631_RS16435;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=LU631_RS16435;old_locus_tag=LU631_16435 NZ_CP089940.1 Protein Homology CDS 3084203 3084871 . + 0 ID=cds-WP_016189531.1;Parent=gene-LU631_RS16435;Dbxref=Genbank:WP_016189531.1;Name=WP_016189531.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668456.1;locus_tag=LU631_RS16435;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_016189531.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3084972 3085277 . + . ID=gene-LU631_RS16440;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=LU631_RS16440;old_locus_tag=LU631_16440 NZ_CP089940.1 Protein Homology CDS 3084972 3085277 . + 0 ID=cds-WP_016189532.1;Parent=gene-LU631_RS16440;Dbxref=Genbank:WP_016189532.1;Name=WP_016189532.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668457.1;locus_tag=LU631_RS16440;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_016189532.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3085282 3085713 . + . ID=gene-LU631_RS16445;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=LU631_RS16445;old_locus_tag=LU631_16445 NZ_CP089940.1 Protein Homology CDS 3085282 3085713 . + 0 ID=cds-WP_016189533.1;Parent=gene-LU631_RS16445;Dbxref=Genbank:WP_016189533.1;Name=WP_016189533.1;Ontology_term=GO:0044780,GO:0005515;gbkey=CDS;gene=flgN;go_function=protein binding|0005515||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025344.1;locus_tag=LU631_RS16445;product=flagellar export chaperone FlgN;protein_id=WP_016189533.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3085923 3087131 . + . ID=gene-LU631_RS16450;Name=LU631_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16450;old_locus_tag=LU631_16450 NZ_CP089940.1 Protein Homology CDS 3085923 3087131 . + 0 ID=cds-WP_046371917.1-2;Parent=gene-LU631_RS16450;Dbxref=Genbank:WP_046371917.1;Name=WP_046371917.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS16450;product=IS256 family transposase;protein_id=WP_046371917.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3087488 3088279 . + . ID=gene-LU631_RS16455;Name=LU631_RS16455;end_range=3088279,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16455;old_locus_tag=LU631_16455;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3087488 3088279 . + 0 ID=cds-LU631_RS16455;Parent=gene-LU631_RS16455;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3088279,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS16455;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3088559 3089191 . + . ID=gene-LU631_RS16460;Name=LU631_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16460;old_locus_tag=LU631_16460 NZ_CP089940.1 GeneMarkS-2+ CDS 3088559 3089191 . + 0 ID=cds-WP_016189537.1;Parent=gene-LU631_RS16460;Dbxref=Genbank:WP_016189537.1;Name=WP_016189537.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS16460;product=hypothetical protein;protein_id=WP_016189537.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3089292 3090830 . - . ID=gene-LU631_RS16465;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=LU631_RS16465;old_locus_tag=LU631_16465 NZ_CP089940.1 Protein Homology CDS 3089292 3090830 . - 0 ID=cds-WP_016189538.1;Parent=gene-LU631_RS16465;Dbxref=Genbank:WP_016189538.1;Name=WP_016189538.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007885822.1;locus_tag=LU631_RS16465;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_016189538.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3090955 3091155 . - . ID=gene-LU631_RS16470;Name=LU631_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16470;old_locus_tag=LU631_16470 NZ_CP089940.1 GeneMarkS-2+ CDS 3090955 3091155 . - 0 ID=cds-WP_152664170.1;Parent=gene-LU631_RS16470;Dbxref=Genbank:WP_152664170.1;Name=WP_152664170.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS16470;product=hypothetical protein;protein_id=WP_152664170.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3091803 3092395 . - . ID=gene-LU631_RS16475;Name=LU631_RS16475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16475;old_locus_tag=LU631_16475;pseudo=true NZ_CP089940.1 Protein Homology CDS 3091803 3092395 . - 0 ID=cds-LU631_RS16475;Parent=gene-LU631_RS16475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964882.1;locus_tag=LU631_RS16475;product=DUF480 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3092419 3093642 . + . ID=gene-LU631_RS16480;Name=LU631_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16480;old_locus_tag=LU631_16480 NZ_CP089940.1 Protein Homology CDS 3092419 3093642 . + 0 ID=cds-WP_046371918.1;Parent=gene-LU631_RS16480;Dbxref=Genbank:WP_046371918.1;Name=WP_046371918.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU631_RS16480;product=IS91 family transposase;protein_id=WP_046371918.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3093817 3094407 . - . ID=gene-LU631_RS16485;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=LU631_RS16485;old_locus_tag=LU631_16485 NZ_CP089940.1 Protein Homology CDS 3093817 3094407 . - 0 ID=cds-WP_016189542.1;Parent=gene-LU631_RS16485;Dbxref=Genbank:WP_016189542.1;Name=WP_016189542.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010246386.1;locus_tag=LU631_RS16485;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_016189542.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3094701 3095264 . + . ID=gene-LU631_RS16490;Name=LU631_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16490;old_locus_tag=LU631_16490 NZ_CP089940.1 Protein Homology CDS 3094701 3095264 . + 0 ID=cds-WP_016189543.1;Parent=gene-LU631_RS16490;Dbxref=Genbank:WP_016189543.1;Name=WP_016189543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017801848.1;locus_tag=LU631_RS16490;product=lipoprotein;protein_id=WP_016189543.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3095420 3096466 . + . ID=gene-LU631_RS16495;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=LU631_RS16495;old_locus_tag=LU631_16495 NZ_CP089940.1 Protein Homology CDS 3095420 3096466 . + 0 ID=cds-WP_016189544.1;Parent=gene-LU631_RS16495;Dbxref=Genbank:WP_016189544.1;Name=WP_016189544.1;Ontology_term=GO:0009220,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441772.1;locus_tag=LU631_RS16495;product=dihydroorotase;protein_id=WP_016189544.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3096693 3097896 . - . ID=gene-LU631_RS16500;Name=LU631_RS16500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16500;old_locus_tag=LU631_16500;pseudo=true NZ_CP089940.1 Protein Homology CDS 3096693 3097896 . - 0 ID=cds-LU631_RS16500;Parent=gene-LU631_RS16500;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343760.1;locus_tag=LU631_RS16500;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3097996 3098241 . + . ID=gene-LU631_RS16505;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=LU631_RS16505;old_locus_tag=LU631_16505 NZ_CP089940.1 Protein Homology CDS 3097996 3098241 . + 0 ID=cds-WP_016189547.1;Parent=gene-LU631_RS16505;Dbxref=Genbank:WP_016189547.1;Name=WP_016189547.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001217759.1;locus_tag=LU631_RS16505;product=DNA damage-inducible protein I;protein_id=WP_016189547.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3098568 3098822 . + . ID=gene-LU631_RS16510;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=LU631_RS16510;old_locus_tag=LU631_16510 NZ_CP089940.1 Protein Homology CDS 3098568 3098822 . + 0 ID=cds-WP_016189548.1;Parent=gene-LU631_RS16510;Dbxref=Genbank:WP_016189548.1;Name=WP_016189548.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441774.1;locus_tag=LU631_RS16510;product=biofilm formation regulator BssS;protein_id=WP_016189548.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3098931 3100043 . + . ID=gene-LU631_RS16515;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=LU631_RS16515;old_locus_tag=LU631_16515 NZ_CP089940.1 Protein Homology CDS 3098931 3100043 . + 0 ID=cds-WP_016189549.1;Parent=gene-LU631_RS16515;Dbxref=Genbank:WP_016189549.1;Name=WP_016189549.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849912.1;locus_tag=LU631_RS16515;product=N-methyl-L-tryptophan oxidase;protein_id=WP_016189549.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3100132 3101298 . - . ID=gene-LU631_RS16520;Name=LU631_RS16520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16520;old_locus_tag=LU631_16520;pseudo=true NZ_CP089940.1 Protein Homology CDS 3100132 3101298 . - 0 ID=cds-LU631_RS16520;Parent=gene-LU631_RS16520;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851531.1;locus_tag=LU631_RS16520;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3101976 3102092 . + . ID=gene-LU631_RS16525;Name=LU631_RS16525;end_range=3102092,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16525;old_locus_tag=LU631_16525;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3101976 3102092 . + 0 ID=cds-LU631_RS16525;Parent=gene-LU631_RS16525;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3102092,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455855.1;locus_tag=LU631_RS16525;partial=true;product=cytochrome b;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3102194 3103234 . + . ID=gene-LU631_RS16530;Name=LU631_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16530;old_locus_tag=LU631_16530 NZ_CP089940.1 Protein Homology CDS 3102194 3103234 . + 0 ID=cds-WP_046371791.1-16;Parent=gene-LU631_RS16530;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS16530;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3103292 3103738 . + . ID=gene-LU631_RS16535;Name=LU631_RS16535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16535;old_locus_tag=LU631_16535;partial=true;pseudo=true;start_range=.,3103292 NZ_CP089940.1 Protein Homology CDS 3103292 3103738 . + 0 ID=cds-LU631_RS16535;Parent=gene-LU631_RS16535;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229608.1;locus_tag=LU631_RS16535;partial=true;product=cytochrome b;pseudo=true;start_range=.,3103292;transl_table=11 NZ_CP089940.1 RefSeq gene 3103788 3104357 . + . ID=gene-LU631_RS16540;Name=LU631_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16540;old_locus_tag=LU631_16540 NZ_CP089940.1 Protein Homology CDS 3103788 3104357 . + 0 ID=cds-WP_087949672.1;Parent=gene-LU631_RS16540;Dbxref=Genbank:WP_087949672.1;Name=WP_087949672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009090908.1;locus_tag=LU631_RS16540;product=YceI family protein;protein_id=WP_087949672.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3104403 3105455 . - . ID=gene-LU631_RS16545;Name=LU631_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16545;old_locus_tag=LU631_16545 NZ_CP089940.1 Protein Homology CDS 3104403 3105455 . - 0 ID=cds-WP_016189556.1;Parent=gene-LU631_RS16545;Dbxref=Genbank:WP_016189556.1;Name=WP_016189556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169444.1;locus_tag=LU631_RS16545;product=rhodanese-related sulfurtransferase;protein_id=WP_016189556.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3105976 3106896 . + . ID=gene-LU631_RS16550;Name=LU631_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16550;old_locus_tag=LU631_16550 NZ_CP089940.1 Protein Homology CDS 3105976 3106896 . + 0 ID=cds-WP_016189557.1;Parent=gene-LU631_RS16550;Dbxref=Genbank:WP_016189557.1;Name=WP_016189557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000183364.1;locus_tag=LU631_RS16550;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee;protein_id=WP_016189557.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3107171 3107728 . + . ID=gene-LU631_RS16555;Name=LU631_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16555;old_locus_tag=LU631_16555 NZ_CP089940.1 Protein Homology CDS 3107171 3107728 . + 0 ID=cds-WP_233480543.1;Parent=gene-LU631_RS16555;Dbxref=Genbank:WP_233480543.1;Name=WP_233480543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012883224.1;locus_tag=LU631_RS16555;product=DUF1440 domain-containing protein;protein_id=WP_233480543.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3108076 3108474 . + . ID=gene-LU631_RS16560;Name=LU631_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16560;old_locus_tag=LU631_16560 NZ_CP089940.1 Protein Homology CDS 3108076 3108474 . + 0 ID=cds-WP_016189559.1;Parent=gene-LU631_RS16560;Dbxref=Genbank:WP_016189559.1;Name=WP_016189559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010246413.1;locus_tag=LU631_RS16560;product=MysB family protein;protein_id=WP_016189559.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3108481 3108720 . - . ID=gene-LU631_RS16565;Name=LU631_RS16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16565;old_locus_tag=LU631_16565 NZ_CP089940.1 Protein Homology CDS 3108481 3108720 . - 0 ID=cds-WP_040465271.1;Parent=gene-LU631_RS16565;Dbxref=Genbank:WP_040465271.1;Name=WP_040465271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539086.1;locus_tag=LU631_RS16565;product=YceK/YidQ family lipoprotein;protein_id=WP_040465271.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3108858 3111425 . - . ID=gene-LU631_RS16570;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=LU631_RS16570;old_locus_tag=LU631_16570 NZ_CP089940.1 Protein Homology CDS 3108858 3111425 . - 0 ID=cds-WP_016189561.1;Parent=gene-LU631_RS16570;Dbxref=Genbank:WP_016189561.1;Name=WP_016189561.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157043.1;locus_tag=LU631_RS16570;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_016189561.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3111418 3112923 . - . ID=gene-LU631_RS16575;Name=LU631_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16575;old_locus_tag=LU631_16575 NZ_CP089940.1 Protein Homology CDS 3111418 3112923 . - 0 ID=cds-WP_198292509.1;Parent=gene-LU631_RS16575;Dbxref=Genbank:WP_198292509.1;Name=WP_198292509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013035984.1;locus_tag=LU631_RS16575;product=glucan biosynthesis protein G;protein_id=WP_198292509.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3113227 3114351 . + . ID=gene-LU631_RS16580;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=LU631_RS16580;old_locus_tag=LU631_16580 NZ_CP089940.1 Protein Homology CDS 3113227 3114351 . + 0 ID=cds-WP_016189563.1;Parent=gene-LU631_RS16580;Dbxref=Genbank:WP_016189563.1;Name=WP_016189563.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543959.1;locus_tag=LU631_RS16580;product=glucans biosynthesis protein MdoC;protein_id=WP_016189563.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3114355 3114513 . - . ID=gene-LU631_RS16585;Name=LU631_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16585;old_locus_tag=LU631_16585 NZ_CP089940.1 GeneMarkS-2+ CDS 3114355 3114513 . - 0 ID=cds-WP_198292504.1;Parent=gene-LU631_RS16585;Dbxref=Genbank:WP_198292504.1;Name=WP_198292504.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS16585;product=hypothetical protein;protein_id=WP_198292504.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3114584 3114865 . + . ID=gene-LU631_RS16590;Name=LU631_RS16590;end_range=3114865,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16590;old_locus_tag=LU631_16590;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3114584 3114865 . + 0 ID=cds-LU631_RS16590;Parent=gene-LU631_RS16590;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3114865,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS16590;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3114872 3115057 . - . ID=gene-LU631_RS16595;Name=LU631_RS16595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16595;old_locus_tag=LU631_16595;partial=true;pseudo=true;start_range=.,3114872 NZ_CP089940.1 Protein Homology CDS 3114872 3115057 . - 0 ID=cds-LU631_RS16595;Parent=gene-LU631_RS16595;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015740814.1;locus_tag=LU631_RS16595;partial=true;product=phospholipase D family protein;pseudo=true;start_range=.,3114872;transl_table=11 NZ_CP089940.1 RefSeq gene 3115593 3115760 . - . ID=gene-LU631_RS16600;Name=LU631_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16600;old_locus_tag=LU631_16600 NZ_CP089940.1 Protein Homology CDS 3115593 3115760 . - 0 ID=cds-WP_016189566.1;Parent=gene-LU631_RS16600;Dbxref=Genbank:WP_016189566.1;Name=WP_016189566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357414.1;locus_tag=LU631_RS16600;product=hypothetical protein;protein_id=WP_016189566.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3116321 3118390 . - . ID=gene-LU631_RS16605;Name=LU631_RS16605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16605;old_locus_tag=LU631_16605;pseudo=true NZ_CP089940.1 Protein Homology CDS 3116321 3118390 . - 0 ID=cds-LU631_RS16605;Parent=gene-LU631_RS16605;Note=internal stop;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015697414.1;locus_tag=LU631_RS16605;product=TonB-dependent siderophore receptor;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3118417 3119090 . + . ID=gene-LU631_RS16610;Name=LU631_RS16610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16610;old_locus_tag=LU631_16610;partial=true;pseudo=true;start_range=.,3118417 NZ_CP089940.1 Protein Homology CDS 3118417 3119090 . + 0 ID=cds-LU631_RS16610;Parent=gene-LU631_RS16610;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU631_RS16610;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,3118417;transl_table=11 NZ_CP089940.1 RefSeq gene 3119996 3120619 . + . ID=gene-LU631_RS16615;Name=LU631_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16615;old_locus_tag=LU631_16615 NZ_CP089940.1 GeneMarkS-2+ CDS 3119996 3120619 . + 0 ID=cds-WP_016189571.1;Parent=gene-LU631_RS16615;Dbxref=Genbank:WP_016189571.1;Name=WP_016189571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS16615;product=hypothetical protein;protein_id=WP_016189571.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3120662 3121072 . + . ID=gene-LU631_RS16620;Name=LU631_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16620;old_locus_tag=LU631_16620 NZ_CP089940.1 GeneMarkS-2+ CDS 3120662 3121072 . + 0 ID=cds-WP_016189572.1;Parent=gene-LU631_RS16620;Dbxref=Genbank:WP_016189572.1;Name=WP_016189572.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS16620;product=DUF1311 domain-containing protein;protein_id=WP_016189572.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3121132 3121548 . + . ID=gene-LU631_RS16625;Name=LU631_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16625;old_locus_tag=LU631_16625 NZ_CP089940.1 GeneMarkS-2+ CDS 3121132 3121548 . + 0 ID=cds-WP_016189573.1;Parent=gene-LU631_RS16625;Dbxref=Genbank:WP_016189573.1;Name=WP_016189573.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS16625;product=hypothetical protein;protein_id=WP_016189573.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3121743 3122078 . + . ID=gene-LU631_RS16630;Name=LU631_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16630;old_locus_tag=LU631_16630 NZ_CP089940.1 GeneMarkS-2+ CDS 3121743 3122078 . + 0 ID=cds-WP_016189574.1;Parent=gene-LU631_RS16630;Dbxref=Genbank:WP_016189574.1;Name=WP_016189574.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS16630;product=hypothetical protein;protein_id=WP_016189574.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3122193 3122703 . + . ID=gene-LU631_RS16635;Name=LU631_RS16635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16635;old_locus_tag=LU631_16635;pseudo=true NZ_CP089940.1 Protein Homology CDS 3122193 3122703 . + 0 ID=cds-LU631_RS16635;Parent=gene-LU631_RS16635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012969062.1;locus_tag=LU631_RS16635;product=DUF2778 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3122681 3122956 . + . ID=gene-LU631_RS16640;Name=LU631_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16640;old_locus_tag=LU631_16640 NZ_CP089940.1 Protein Homology CDS 3122681 3122956 . + 0 ID=cds-WP_016189577.1;Parent=gene-LU631_RS16640;Dbxref=Genbank:WP_016189577.1;Name=WP_016189577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439934.1;locus_tag=LU631_RS16640;product=hypothetical protein;protein_id=WP_016189577.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3123080 3123280 . - . ID=gene-LU631_RS16645;Name=LU631_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16645;old_locus_tag=LU631_16645 NZ_CP089940.1 Protein Homology CDS 3123080 3123280 . - 0 ID=cds-WP_232426821.1;Parent=gene-LU631_RS16645;Dbxref=Genbank:WP_232426821.1;Name=WP_232426821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308279.1;locus_tag=LU631_RS16645;product=type II toxin-antitoxin system YafQ family toxin;protein_id=WP_232426821.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3123365 3123625 . - . ID=gene-LU631_RS16650;Name=LU631_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16650;old_locus_tag=LU631_16650 NZ_CP089940.1 Protein Homology CDS 3123365 3123625 . - 0 ID=cds-WP_016189579.1;Parent=gene-LU631_RS16650;Dbxref=Genbank:WP_016189579.1;Name=WP_016189579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462420.1;locus_tag=LU631_RS16650;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_016189579.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3123771 3123944 . + . ID=gene-LU631_RS16655;Name=LU631_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16655;old_locus_tag=LU631_16655 NZ_CP089940.1 GeneMarkS-2+ CDS 3123771 3123944 . + 0 ID=cds-WP_016189580.1;Parent=gene-LU631_RS16655;Dbxref=Genbank:WP_016189580.1;Name=WP_016189580.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS16655;product=hypothetical protein;protein_id=WP_016189580.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3124455 3125438 . + . ID=gene-LU631_RS16660;Name=LU631_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16660;old_locus_tag=LU631_16660 NZ_CP089940.1 GeneMarkS-2+ CDS 3124455 3125438 . + 0 ID=cds-WP_232426796.1;Parent=gene-LU631_RS16660;Dbxref=Genbank:WP_232426796.1;Name=WP_232426796.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS16660;product=hypothetical protein;protein_id=WP_232426796.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3125517 3125705 . + . ID=gene-LU631_RS16665;Name=LU631_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16665;old_locus_tag=LU631_16665 NZ_CP089940.1 GeneMarkS-2+ CDS 3125517 3125705 . + 0 ID=cds-WP_232426797.1;Parent=gene-LU631_RS16665;Dbxref=Genbank:WP_232426797.1;Name=WP_232426797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS16665;product=hypothetical protein;protein_id=WP_232426797.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3125720 3126841 . + . ID=gene-LU631_RS16670;Name=LU631_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16670;old_locus_tag=LU631_16670 NZ_CP089940.1 GeneMarkS-2+ CDS 3125720 3126841 . + 0 ID=cds-WP_016189581.1;Parent=gene-LU631_RS16670;Dbxref=Genbank:WP_016189581.1;Name=WP_016189581.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS16670;product=tail fiber;protein_id=WP_016189581.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3127137 3127834 . + . ID=gene-LU631_RS16675;Name=LU631_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16675;old_locus_tag=LU631_16675 NZ_CP089940.1 Protein Homology CDS 3127137 3127386 . + 0 ID=cds-WP_233481924.1;Parent=gene-LU631_RS16675;Dbxref=Genbank:WP_233481924.1;Name=WP_233481924.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS16675;product=IS1 family transposase;protein_id=WP_233481924.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 3127386 3127834 . + 2 ID=cds-WP_233481924.1;Parent=gene-LU631_RS16675;Dbxref=Genbank:WP_233481924.1;Name=WP_233481924.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS16675;product=IS1 family transposase;protein_id=WP_233481924.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3127852 3128829 . - . ID=gene-LU631_RS16680;Name=LU631_RS16680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16680;old_locus_tag=LU631_16680;partial=true;pseudo=true;start_range=.,3127852 NZ_CP089940.1 Protein Homology CDS 3127852 3128829 . - 0 ID=cds-LU631_RS16680;Parent=gene-LU631_RS16680;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000772652.1;locus_tag=LU631_RS16680;partial=true;product=integrase arm-type DNA-binding domain-containing protein;pseudo=true;start_range=.,3127852;transl_table=11 NZ_CP089940.1 RefSeq gene 3128984 3129069 . - . ID=gene-LU631_RS16685;Name=LU631_RS16685;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS16685;old_locus_tag=LU631_16685 NZ_CP089940.1 tRNAscan-SE tRNA 3128984 3129069 . - . ID=rna-LU631_RS16685;Parent=gene-LU631_RS16685;anticodon=(pos:complement(3129033..3129035));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS16685;product=tRNA-Leu NZ_CP089940.1 tRNAscan-SE exon 3128984 3129069 . - . ID=exon-LU631_RS16685-1;Parent=rna-LU631_RS16685;anticodon=(pos:complement(3129033..3129035));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS16685;product=tRNA-Leu NZ_CP089940.1 RefSeq gene 3129082 3129155 . - . ID=gene-LU631_RS16690;Name=LU631_RS16690;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS16690;old_locus_tag=LU631_16690 NZ_CP089940.1 tRNAscan-SE tRNA 3129082 3129155 . - . ID=rna-LU631_RS16690;Parent=gene-LU631_RS16690;anticodon=(pos:complement(3129121..3129123));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS16690;product=tRNA-Cys NZ_CP089940.1 tRNAscan-SE exon 3129082 3129155 . - . ID=exon-LU631_RS16690-1;Parent=rna-LU631_RS16690;anticodon=(pos:complement(3129121..3129123));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS16690;product=tRNA-Cys NZ_CP089940.1 RefSeq gene 3129198 3129273 . - . ID=gene-LU631_RS16695;Name=LU631_RS16695;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS16695;old_locus_tag=LU631_16695 NZ_CP089940.1 tRNAscan-SE tRNA 3129198 3129273 . - . ID=rna-LU631_RS16695;Parent=gene-LU631_RS16695;anticodon=(pos:complement(3129238..3129240));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS16695;product=tRNA-Gly NZ_CP089940.1 tRNAscan-SE exon 3129198 3129273 . - . ID=exon-LU631_RS16695-1;Parent=rna-LU631_RS16695;anticodon=(pos:complement(3129238..3129240));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS16695;product=tRNA-Gly NZ_CP089940.1 RefSeq gene 3129422 3129970 . - . ID=gene-LU631_RS16700;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=LU631_RS16700;old_locus_tag=LU631_16700 NZ_CP089940.1 Protein Homology CDS 3129422 3129970 . - 0 ID=cds-WP_016189584.1;Parent=gene-LU631_RS16700;Dbxref=Genbank:WP_016189584.1;Name=WP_016189584.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802541.1;locus_tag=LU631_RS16700;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_016189584.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3130042 3131874 . - . ID=gene-LU631_RS16705;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=LU631_RS16705;old_locus_tag=LU631_16705 NZ_CP089940.1 Protein Homology CDS 3130042 3131874 . - 0 ID=cds-WP_016189585.1;Parent=gene-LU631_RS16705;Dbxref=Genbank:WP_016189585.1;Name=WP_016189585.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310678.2;locus_tag=LU631_RS16705;product=excinuclease ABC subunit UvrC;protein_id=WP_016189585.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3131867 3132526 . - . ID=gene-LU631_RS16710;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=LU631_RS16710;old_locus_tag=LU631_16710 NZ_CP089940.1 Protein Homology CDS 3131867 3132526 . - 0 ID=cds-WP_016189586.1;Parent=gene-LU631_RS16710;Dbxref=Genbank:WP_016189586.1;Name=WP_016189586.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008813142.1;locus_tag=LU631_RS16710;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_016189586.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3132811 3132987 . + . ID=gene-LU631_RS16715;Name=LU631_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16715;old_locus_tag=LU631_16715 NZ_CP089940.1 Protein Homology CDS 3132811 3132987 . + 0 ID=cds-WP_016189587.1;Parent=gene-LU631_RS16715;Dbxref=Genbank:WP_016189587.1;Name=WP_016189587.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014467.2;locus_tag=LU631_RS16715;product=tail fiber assembly protein;protein_id=WP_016189587.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3133228 3133857 . - . ID=gene-LU631_RS16720;Name=LU631_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16720;old_locus_tag=LU631_16720 NZ_CP089940.1 Protein Homology CDS 3133228 3133857 . - 0 ID=cds-WP_016189588.1;Parent=gene-LU631_RS16720;Dbxref=Genbank:WP_016189588.1;Name=WP_016189588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201596.1;locus_tag=LU631_RS16720;product=autoinducer synthase;protein_id=WP_016189588.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3134030 3134191 . - . ID=gene-LU631_RS16725;Name=LU631_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16725;old_locus_tag=LU631_16725 NZ_CP089940.1 Protein Homology CDS 3134030 3134191 . - 0 ID=cds-WP_233481925.1;Parent=gene-LU631_RS16725;Dbxref=Genbank:WP_233481925.1;Name=WP_233481925.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.2;locus_tag=LU631_RS16725;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_233481925.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3134202 3134621 . - . ID=gene-LU631_RS16730;Name=LU631_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16730;old_locus_tag=LU631_16730 NZ_CP089940.1 Protein Homology CDS 3134202 3134621 . - 0 ID=cds-WP_232426799.1;Parent=gene-LU631_RS16730;Dbxref=Genbank:WP_232426799.1;Name=WP_232426799.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015437.2;locus_tag=LU631_RS16730;product=autoinducer binding domain-containing protein;protein_id=WP_232426799.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3135586 3136596 . + . ID=gene-LU631_RS16735;Name=LU631_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16735;old_locus_tag=LU631_16735 NZ_CP089940.1 Protein Homology CDS 3135586 3136596 . + 0 ID=cds-WP_046371922.1;Parent=gene-LU631_RS16735;Dbxref=Genbank:WP_046371922.1;Name=WP_046371922.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487120.1;locus_tag=LU631_RS16735;product=IS110 family transposase;protein_id=WP_046371922.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3138208 3139605 . + . ID=gene-LU631_RS16740;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=LU631_RS16740;old_locus_tag=LU631_16740 NZ_CP089940.1 Protein Homology CDS 3138208 3139605 . + 0 ID=cds-WP_016189590.1;Parent=gene-LU631_RS16740;Dbxref=Genbank:WP_016189590.1;Name=WP_016189590.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157019.1;locus_tag=LU631_RS16740;product=D-serine/D-alanine/glycine transporter;protein_id=WP_016189590.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3139669 3140177 . - . ID=gene-LU631_RS16745;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=pseudogene;locus_tag=LU631_RS16745;old_locus_tag=LU631_16745;pseudo=true NZ_CP089940.1 Protein Homology CDS 3139669 3140177 . - 0 ID=cds-LU631_RS16745;Parent=gene-LU631_RS16745;Note=frameshifted%3B internal stop;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816251.1;locus_tag=LU631_RS16745;product=HTH-type transcriptional regulator RutR;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3140536 3141630 . + . ID=gene-LU631_RS16750;Name=rutA;gbkey=Gene;gene=rutA;gene_biotype=pseudogene;locus_tag=LU631_RS16750;old_locus_tag=LU631_16750;pseudo=true NZ_CP089940.1 Protein Homology CDS 3140536 3141630 . + 0 ID=cds-LU631_RS16750;Parent=gene-LU631_RS16750;Note=internal stop;Ontology_term=GO:0008150,GO:0010181,GO:0016491;gbkey=CDS;gene=rutA;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309285.4;locus_tag=LU631_RS16750;product=pyrimidine utilization protein A;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3141673 3142357 . + . ID=gene-LU631_RS16755;Name=rutB;gbkey=Gene;gene=rutB;gene_biotype=pseudogene;locus_tag=LU631_RS16755;old_locus_tag=LU631_16755;pseudo=true NZ_CP089940.1 Protein Homology CDS 3141673 3142357 . + 0 ID=cds-LU631_RS16755;Parent=gene-LU631_RS16755;Note=frameshifted;Ontology_term=GO:0016811;gbkey=CDS;gene=rutB;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010246624.1;locus_tag=LU631_RS16755;product=pyrimidine utilization protein B;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3142853 3143452 . + . ID=gene-LU631_RS16760;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=LU631_RS16760;old_locus_tag=LU631_16760 NZ_CP089940.1 Protein Homology CDS 3142853 3143452 . + 0 ID=cds-WP_016189596.1;Parent=gene-LU631_RS16760;Dbxref=Genbank:WP_016189596.1;Name=WP_016189596.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=LU631_RS16760;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_016189596.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3143473 3143703 . + . ID=gene-LU631_RS16765;Name=LU631_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16765;old_locus_tag=LU631_16765 NZ_CP089940.1 Protein Homology CDS 3143473 3143703 . + 0 ID=cds-WP_016189597.1;Parent=gene-LU631_RS16765;Dbxref=Genbank:WP_016189597.1;Name=WP_016189597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=LU631_RS16765;product=YccJ family protein;protein_id=WP_016189597.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3143803 3145011 . - . ID=gene-LU631_RS16770;Name=LU631_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16770;old_locus_tag=LU631_16770 NZ_CP089940.1 Protein Homology CDS 3143803 3145011 . - 0 ID=cds-WP_046371923.1;Parent=gene-LU631_RS16770;Dbxref=Genbank:WP_046371923.1;Name=WP_046371923.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU631_RS16770;product=IS256 family transposase;protein_id=WP_046371923.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3145736 3147107 . + . ID=gene-LU631_RS16775;Name=LU631_RS16775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16775;old_locus_tag=LU631_16775;pseudo=true NZ_CP089940.1 Protein Homology CDS 3145736 3147107 . + 0 ID=cds-LU631_RS16775;Parent=gene-LU631_RS16775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668504.1;locus_tag=LU631_RS16775;product=NAD-dependent succinate-semialdehyde dehydrogenase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3147168 3148655 . - . ID=gene-LU631_RS16780;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=LU631_RS16780;old_locus_tag=LU631_16780 NZ_CP089940.1 Protein Homology CDS 3147168 3148655 . - 0 ID=cds-WP_016189598.1;Parent=gene-LU631_RS16780;Dbxref=Genbank:WP_016189598.1;Name=WP_016189598.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007887331.1;locus_tag=LU631_RS16780;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_016189598.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3149095 3149182 . - . ID=gene-LU631_RS16785;Name=LU631_RS16785;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS16785;old_locus_tag=LU631_16785 NZ_CP089940.1 tRNAscan-SE tRNA 3149095 3149182 . - . ID=rna-LU631_RS16785;Parent=gene-LU631_RS16785;anticodon=(pos:complement(3149146..3149148));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS16785;product=tRNA-Ser NZ_CP089940.1 tRNAscan-SE exon 3149095 3149182 . - . ID=exon-LU631_RS16785-1;Parent=rna-LU631_RS16785;anticodon=(pos:complement(3149146..3149148));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS16785;product=tRNA-Ser NZ_CP089940.1 RefSeq gene 3149400 3150056 . + . ID=gene-LU631_RS16790;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=LU631_RS16790;old_locus_tag=LU631_16790 NZ_CP089940.1 Protein Homology CDS 3149400 3150056 . + 0 ID=cds-WP_016189599.1;Parent=gene-LU631_RS16790;Dbxref=Genbank:WP_016189599.1;Name=WP_016189599.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172416.1;locus_tag=LU631_RS16790;product=FtsH protease modulator YccA;protein_id=WP_016189599.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3150176 3150502 . + . ID=gene-LU631_RS16795;Name=LU631_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16795;old_locus_tag=LU631_16795 NZ_CP089940.1 Protein Homology CDS 3150176 3150502 . + 0 ID=cds-WP_016189600.1;Parent=gene-LU631_RS16795;Dbxref=Genbank:WP_016189600.1;Name=WP_016189600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357366.1;locus_tag=LU631_RS16795;product=TusE/DsrC/DsvC family sulfur relay protein;protein_id=WP_016189600.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3150545 3150822 . - . ID=gene-LU631_RS16800;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=pseudogene;locus_tag=LU631_RS16800;old_locus_tag=LU631_16800;pseudo=true NZ_CP089940.1 Protein Homology CDS 3150545 3150822 . - 0 ID=cds-LU631_RS16800;Parent=gene-LU631_RS16800;Note=frameshifted;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201576.1;locus_tag=LU631_RS16800;product=acylphosphatase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3150910 3152100 . + . ID=gene-LU631_RS16805;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=LU631_RS16805;old_locus_tag=LU631_16805 NZ_CP089940.1 Protein Homology CDS 3150910 3152100 . + 0 ID=cds-WP_016189602.1;Parent=gene-LU631_RS16805;Dbxref=Genbank:WP_016189602.1;Name=WP_016189602.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415487.4;locus_tag=LU631_RS16805;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_016189602.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3152159 3152475 . + . ID=gene-LU631_RS16810;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=pseudogene;locus_tag=LU631_RS16810;old_locus_tag=LU631_16810;pseudo=true NZ_CP089940.1 Protein Homology CDS 3152159 3152475 . + 0 ID=cds-LU631_RS16810;Parent=gene-LU631_RS16810;Note=frameshifted;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535677.1;locus_tag=LU631_RS16810;product=heat shock protein HspQ;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3152488 3152901 . - . ID=gene-LU631_RS16815;Name=LU631_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16815;old_locus_tag=LU631_16815 NZ_CP089940.1 Protein Homology CDS 3152488 3152901 . - 0 ID=cds-WP_016189604.1;Parent=gene-LU631_RS16815;Dbxref=Genbank:WP_016189604.1;Name=WP_016189604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006189.1;locus_tag=LU631_RS16815;product=CoA-binding protein;protein_id=WP_016189604.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3152965 3153468 . - . ID=gene-LU631_RS16820;Name=LU631_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16820;old_locus_tag=LU631_16820 NZ_CP089940.1 Protein Homology CDS 3152965 3153468 . - 0 ID=cds-WP_046371924.1;Parent=gene-LU631_RS16820;Dbxref=Genbank:WP_046371924.1;Name=WP_046371924.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU631_RS16820;product=IS1 family transposase;protein_id=WP_046371924.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3153387 3153662 . - . ID=gene-LU631_RS16825;Name=LU631_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16825;old_locus_tag=LU631_16825 NZ_CP089940.1 Protein Homology CDS 3153387 3153662 . - 0 ID=cds-WP_072052805.1;Parent=gene-LU631_RS16825;Dbxref=Genbank:WP_072052805.1;Name=WP_072052805.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU631_RS16825;product=IS1-like element transposase;protein_id=WP_072052805.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3153859 3154047 . + . ID=gene-LU631_RS16830;Name=LU631_RS16830;end_range=3154047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16830;old_locus_tag=LU631_16830;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3153859 3154047 . + 0 ID=cds-LU631_RS16830;Parent=gene-LU631_RS16830;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3154047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169403.1;locus_tag=LU631_RS16830;partial=true;product=DUF2057 family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3154084 3155292 . - . ID=gene-LU631_RS16835;Name=LU631_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16835;old_locus_tag=LU631_16835 NZ_CP089940.1 Protein Homology CDS 3154084 3155292 . - 0 ID=cds-WP_046371926.1;Parent=gene-LU631_RS16835;Dbxref=Genbank:WP_046371926.1;Name=WP_046371926.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS16835;product=IS256 family transposase;protein_id=WP_046371926.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3155317 3155838 . + . ID=gene-LU631_RS16840;Name=LU631_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16840;old_locus_tag=LU631_16840 NZ_CP089940.1 Protein Homology CDS 3155317 3155838 . + 0 ID=cds-WP_200896931.1;Parent=gene-LU631_RS16840;Dbxref=Genbank:WP_200896931.1;Name=WP_200896931.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021358.2;locus_tag=LU631_RS16840;product=DUF2057 family protein;protein_id=WP_200896931.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3156297 3158351 . - . ID=gene-LU631_RS16845;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=LU631_RS16845;old_locus_tag=LU631_16845 NZ_CP089940.1 Protein Homology CDS 3156297 3158351 . - 0 ID=cds-WP_016189606.1;Parent=gene-LU631_RS16845;Dbxref=Genbank:WP_016189606.1;Name=WP_016189606.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320717.1;locus_tag=LU631_RS16845;product=DNA helicase IV;protein_id=WP_016189606.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3158483 3158929 . + . ID=gene-LU631_RS16850;Name=LU631_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16850;old_locus_tag=LU631_16850 NZ_CP089940.1 Protein Homology CDS 3158483 3158929 . + 0 ID=cds-WP_016189607.1;Parent=gene-LU631_RS16850;Dbxref=Genbank:WP_016189607.1;Name=WP_016189607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201569.1;locus_tag=LU631_RS16850;product=YccF domain-containing protein;protein_id=WP_016189607.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3159081 3160242 . - . ID=gene-LU631_RS16855;Name=LU631_RS16855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16855;old_locus_tag=LU631_16855;pseudo=true NZ_CP089940.1 Protein Homology CDS 3159081 3160242 . - 0 ID=cds-LU631_RS16855;Parent=gene-LU631_RS16855;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612096.1;locus_tag=LU631_RS16855;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3160318 3161040 . + . ID=gene-LU631_RS16860;Name=LU631_RS16860;end_range=3161040,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16860;old_locus_tag=LU631_16860;partial=true;pseudo=true;start_range=.,3160318 NZ_CP089940.1 Protein Homology CDS 3160318 3161040 . + 0 ID=cds-LU631_RS16860;Parent=gene-LU631_RS16860;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3161040,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172409.1;locus_tag=LU631_RS16860;partial=true;product=TIGR01666 family membrane protein;pseudo=true;start_range=.,3160318;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3161089 3161800 . + . ID=gene-LU631_RS16865;Name=LU631_RS16865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16865;old_locus_tag=LU631_16865;pseudo=true NZ_CP089940.1 Protein Homology CDS 3161089 3161800 . + 0 ID=cds-LU631_RS16865;Parent=gene-LU631_RS16865;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=LU631_RS16865;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3161815 3163137 . + . ID=gene-LU631_RS16870;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=pseudogene;locus_tag=LU631_RS16870;old_locus_tag=LU631_16870;partial=true;pseudo=true;start_range=.,3161815 NZ_CP089940.1 Protein Homology CDS 3161815 3163137 . + 0 ID=cds-LU631_RS16870;Parent=gene-LU631_RS16870;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007768456.1;locus_tag=LU631_RS16870;partial=true;product=YccS family putative transporter;pseudo=true;start_range=.,3161815;transl_table=11 NZ_CP089940.1 RefSeq gene 3163097 3163735 . - . ID=gene-LU631_RS16875;Name=LU631_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16875;old_locus_tag=LU631_16875 NZ_CP089940.1 Protein Homology CDS 3163097 3163735 . - 0 ID=cds-WP_016189612.1;Parent=gene-LU631_RS16875;Dbxref=Genbank:WP_016189612.1;Name=WP_016189612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802503.1;locus_tag=LU631_RS16875;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_016189612.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3163938 3164447 . + . ID=gene-LU631_RS16880;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=LU631_RS16880;old_locus_tag=LU631_16880 NZ_CP089940.1 Protein Homology CDS 3163938 3164447 . + 0 ID=cds-WP_016189613.1;Parent=gene-LU631_RS16880;Dbxref=Genbank:WP_016189613.1;Name=WP_016189613.1;gbkey=CDS;gene=sulA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169397.1;locus_tag=LU631_RS16880;product=cell division inhibitor SulA;protein_id=WP_016189613.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3164795 3165862 . + . ID=gene-LU631_RS16885;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=LU631_RS16885;old_locus_tag=LU631_16885 NZ_CP089940.1 Protein Homology CDS 3164795 3165862 . + 0 ID=cds-WP_016189614.1;Parent=gene-LU631_RS16885;Dbxref=Genbank:WP_016189614.1;Name=WP_016189614.1;Ontology_term=GO:0015288;gbkey=CDS;gene=ompA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942790.1;locus_tag=LU631_RS16885;product=porin OmpA;protein_id=WP_016189614.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3166037 3166513 . - . ID=gene-LU631_RS16890;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=LU631_RS16890;old_locus_tag=LU631_16890 NZ_CP089940.1 Protein Homology CDS 3166037 3166513 . - 0 ID=cds-WP_016189615.1;Parent=gene-LU631_RS16890;Dbxref=Genbank:WP_016189615.1;Name=WP_016189615.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606174.1;locus_tag=LU631_RS16890;product=macrodomain Ter protein MatP;protein_id=WP_016189615.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3166638 3168455 . + . ID=gene-LU631_RS16895;Name=LU631_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16895;old_locus_tag=LU631_16895 NZ_CP089940.1 Protein Homology CDS 3166638 3168455 . + 0 ID=cds-WP_232426800.1;Parent=gene-LU631_RS16895;Dbxref=Genbank:WP_232426800.1;Name=WP_232426800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007887360.1;locus_tag=LU631_RS16895;product=Lon protease family protein;protein_id=WP_232426800.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3168523 3169041 . + . ID=gene-LU631_RS16900;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=LU631_RS16900;old_locus_tag=LU631_16900 NZ_CP089940.1 Protein Homology CDS 3168523 3169041 . + 0 ID=cds-WP_016189617.1;Parent=gene-LU631_RS16900;Dbxref=Genbank:WP_016189617.1;Name=WP_016189617.1;Ontology_term=GO:0006633,GO:0008693;gbkey=CDS;gene=fabA;go_function=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity|0008693||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415474.1;locus_tag=LU631_RS16900;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_016189617.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3169143 3169310 . - . ID=gene-LU631_RS16905;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=LU631_RS16905;old_locus_tag=LU631_16905 NZ_CP089940.1 Protein Homology CDS 3169143 3169310 . - 0 ID=cds-WP_016189618.1;Parent=gene-LU631_RS16905;Dbxref=Genbank:WP_016189618.1;Name=WP_016189618.1;gbkey=CDS;gene=rmf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=LU631_RS16905;product=ribosome modulation factor;protein_id=WP_016189618.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3169710 3170336 . - . ID=gene-LU631_RS16910;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=LU631_RS16910;old_locus_tag=LU631_16910 NZ_CP089940.1 Protein Homology CDS 3169710 3170336 . - 0 ID=cds-WP_016189619.1;Parent=gene-LU631_RS16910;Dbxref=Genbank:WP_016189619.1;Name=WP_016189619.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169393.1;locus_tag=LU631_RS16910;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_016189619.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3170336 3171976 . - . ID=gene-LU631_RS16915;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=LU631_RS16915;old_locus_tag=LU631_16915 NZ_CP089940.1 Protein Homology CDS 3170336 3171976 . - 0 ID=cds-WP_016189620.1;Parent=gene-LU631_RS16915;Dbxref=Genbank:WP_016189620.1;Name=WP_016189620.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172408.1;locus_tag=LU631_RS16915;product=intermembrane transport protein PqiB;protein_id=WP_016189620.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3171963 3173237 . - . ID=gene-LU631_RS16920;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=LU631_RS16920;old_locus_tag=LU631_16920 NZ_CP089940.1 Protein Homology CDS 3171963 3173237 . - 0 ID=cds-WP_016189621.1;Parent=gene-LU631_RS16920;Dbxref=Genbank:WP_016189621.1;Name=WP_016189621.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156975.1;locus_tag=LU631_RS16920;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_016189621.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3173266 3175176 . - . ID=gene-LU631_RS16925;Name=LU631_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16925;old_locus_tag=LU631_16925 NZ_CP089940.1 Protein Homology CDS 3173266 3175176 . - 0 ID=cds-WP_016189622.1;Parent=gene-LU631_RS16925;Dbxref=Genbank:WP_016189622.1;Name=WP_016189622.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201558.1;locus_tag=LU631_RS16925;product=ABC transporter ATP-binding protein;protein_id=WP_016189622.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3175182 3177299 . - . ID=gene-LU631_RS16930;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=LU631_RS16930;old_locus_tag=LU631_16930 NZ_CP089940.1 Protein Homology CDS 3175182 3177299 . - 0 ID=cds-WP_016189623.1;Parent=gene-LU631_RS16930;Dbxref=Genbank:WP_016189623.1;Name=WP_016189623.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169389.1;locus_tag=LU631_RS16930;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_016189623.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3178076 3179116 . - . ID=gene-LU631_RS16935;Name=LU631_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16935;old_locus_tag=LU631_16935 NZ_CP089940.1 Protein Homology CDS 3178076 3179116 . - 0 ID=cds-WP_046371928.1;Parent=gene-LU631_RS16935;Dbxref=Genbank:WP_046371928.1;Name=WP_046371928.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS16935;product=IS481 family transposase;protein_id=WP_046371928.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3179522 3179662 . + . ID=gene-LU631_RS16940;Name=LU631_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16940;old_locus_tag=LU631_16940 NZ_CP089940.1 GeneMarkS-2+ CDS 3179522 3179662 . + 0 ID=cds-WP_161796965.1-14;Parent=gene-LU631_RS16940;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS16940;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3179671 3180885 . + . ID=gene-LU631_RS16945;Name=LU631_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16945;old_locus_tag=LU631_16945 NZ_CP089940.1 Protein Homology CDS 3179671 3180885 . + 0 ID=cds-WP_046371879.1-13;Parent=gene-LU631_RS16945;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS16945;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3181076 3181621 . - . ID=gene-LU631_RS16950;Name=LU631_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16950;old_locus_tag=LU631_16950 NZ_CP089940.1 Protein Homology CDS 3181076 3181621 . - 0 ID=cds-WP_016189624.1;Parent=gene-LU631_RS16950;Dbxref=Genbank:WP_016189624.1;Name=WP_016189624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015700640.1;locus_tag=LU631_RS16950;product=cell division protein ZapC;protein_id=WP_016189624.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3181783 3182793 . - . ID=gene-LU631_RS16955;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=LU631_RS16955;old_locus_tag=LU631_16955 NZ_CP089940.1 Protein Homology CDS 3181783 3182793 . - 0 ID=cds-WP_040465365.1;Parent=gene-LU631_RS16955;Dbxref=Genbank:WP_040465365.1;Name=WP_040465365.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309056.1;locus_tag=LU631_RS16955;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_040465365.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3183080 3184300 . - . ID=gene-LU631_RS16960;Name=LU631_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16960;old_locus_tag=LU631_16960 NZ_CP089940.1 Protein Homology CDS 3183080 3184300 . - 0 ID=cds-WP_046371929.1-5;Parent=gene-LU631_RS16960;Dbxref=Genbank:WP_046371929.1;Name=WP_046371929.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343765.1;locus_tag=LU631_RS16960;product=ISL3 family transposase;protein_id=WP_046371929.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3184334 3185041 . - . ID=gene-LU631_RS16965;Name=LU631_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16965;old_locus_tag=LU631_16965 NZ_CP089940.1 Protein Homology CDS 3184334 3185041 . - 0 ID=cds-WP_046371930.1;Parent=gene-LU631_RS16965;Dbxref=Genbank:WP_046371930.1;Name=WP_046371930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308877.1;locus_tag=LU631_RS16965;product=M91 family zinc metallopeptidase;protein_id=WP_046371930.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3185248 3185789 . + . ID=gene-LU631_RS16970;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=pseudogene;locus_tag=LU631_RS16970;old_locus_tag=LU631_16970;pseudo=true NZ_CP089940.1 Protein Homology CDS 3185248 3185789 . + 0 ID=cds-LU631_RS16970;Parent=gene-LU631_RS16970;Note=frameshifted;Ontology_term=GO:0046306,GO:0008752;gbkey=CDS;gene=ssuE;go_function=FMN reductase activity|0008752||IEA;go_process=alkanesulfonate catabolic process|0046306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169385.1;locus_tag=LU631_RS16970;product=NADPH-dependent FMN reductase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3185800 3186000 . + . ID=gene-LU631_RS16975;Name=LU631_RS16975;end_range=3186000,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16975;old_locus_tag=LU631_16975;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3185800 3186000 . + 0 ID=cds-LU631_RS16975;Parent=gene-LU631_RS16975;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3186000,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172404.1;locus_tag=LU631_RS16975;partial=true;product=aliphatic sulfonate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3186053 3186750 . + . ID=gene-LU631_RS16980;Name=LU631_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16980;old_locus_tag=LU631_16980 NZ_CP089940.1 Protein Homology CDS 3186053 3186302 . + 0 ID=cds-WP_233481926.1;Parent=gene-LU631_RS16980;Dbxref=Genbank:WP_233481926.1;Name=WP_233481926.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS16980;product=IS1 family transposase;protein_id=WP_233481926.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 3186302 3186750 . + 2 ID=cds-WP_233481926.1;Parent=gene-LU631_RS16980;Dbxref=Genbank:WP_233481926.1;Name=WP_233481926.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS16980;product=IS1 family transposase;protein_id=WP_233481926.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3186766 3186909 . + . ID=gene-LU631_RS16985;Name=LU631_RS16985;end_range=3186909,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS16985;old_locus_tag=LU631_16985;partial=true;pseudo=true;start_range=.,3186766 NZ_CP089940.1 Protein Homology CDS 3186766 3186909 . + 0 ID=cds-LU631_RS16985;Parent=gene-LU631_RS16985;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3186909,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001244308.1;locus_tag=LU631_RS16985;partial=true;product=aliphatic sulfonate ABC transporter substrate-binding protein;pseudo=true;start_range=.,3186766;transl_table=11 NZ_CP089940.1 RefSeq gene 3187169 3189784 . - . ID=gene-LU631_RS16990;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=LU631_RS16990;old_locus_tag=LU631_16990 NZ_CP089940.1 Protein Homology CDS 3187169 3189784 . - 0 ID=cds-WP_016189629.1;Parent=gene-LU631_RS16990;Dbxref=Genbank:WP_016189629.1;Name=WP_016189629.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172401.1;locus_tag=LU631_RS16990;product=aminopeptidase N;protein_id=WP_016189629.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3189952 3190884 . + . ID=gene-LU631_RS16995;Name=LU631_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS16995;old_locus_tag=LU631_16995 NZ_CP089940.1 Protein Homology CDS 3189952 3190884 . + 0 ID=cds-WP_267958439.1;Parent=gene-LU631_RS16995;Dbxref=Genbank:WP_267958439.1;Name=WP_267958439.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU631_RS16995;product=IS91 family transposase;protein_id=WP_267958439.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3190841 3191176 . + . ID=gene-LU631_RS26140;Name=LU631_RS26140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26140 NZ_CP089940.1 Protein Homology CDS 3190841 3191176 . + 0 ID=cds-WP_267958440.1-2;Parent=gene-LU631_RS26140;Dbxref=Genbank:WP_267958440.1;Name=WP_267958440.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26140;product=hypothetical protein;protein_id=WP_267958440.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3191311 3191643 . - . ID=gene-LU631_RS17000;Name=LU631_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17000;old_locus_tag=LU631_17000 NZ_CP089940.1 Protein Homology CDS 3191311 3191643 . - 0 ID=cds-WP_046371934.1;Parent=gene-LU631_RS17000;Dbxref=Genbank:WP_046371934.1;Name=WP_046371934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803149.1;locus_tag=LU631_RS17000;product=hypothetical protein;protein_id=WP_046371934.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3191939 3192247 . - . ID=gene-LU631_RS17005;Name=LU631_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17005;old_locus_tag=LU631_17005 NZ_CP089940.1 GeneMarkS-2+ CDS 3191939 3192247 . - 0 ID=cds-WP_016189631.1;Parent=gene-LU631_RS17005;Dbxref=Genbank:WP_016189631.1;Name=WP_016189631.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS17005;product=hypothetical protein;protein_id=WP_016189631.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3192602 3193057 . - . ID=gene-LU631_RS17010;Name=LU631_RS17010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17010;old_locus_tag=LU631_17010;partial=true;pseudo=true;start_range=.,3192602 NZ_CP089940.1 Protein Homology CDS 3192602 3193057 . - 0 ID=cds-LU631_RS17010;Parent=gene-LU631_RS17010;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000544830.1;locus_tag=LU631_RS17010;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,3192602;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3193057 3193323 . - . ID=gene-LU631_RS17015;Name=LU631_RS17015;end_range=3193323,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17015;old_locus_tag=LU631_17015;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3193057 3193323 . - 0 ID=cds-LU631_RS17015;Parent=gene-LU631_RS17015;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3193323,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000952428.1;locus_tag=LU631_RS17015;partial=true;product=IS21 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3193322 3193396 . - . ID=gene-LU631_RS17020;Name=LU631_RS17020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17020;old_locus_tag=LU631_17020;partial=true;pseudo=true;start_range=.,3193322 NZ_CP089940.1 Protein Homology CDS 3193322 3193396 . - 0 ID=cds-LU631_RS17020;Parent=gene-LU631_RS17020;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013183171.1;locus_tag=LU631_RS17020;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,3193322;transl_table=11 NZ_CP089940.1 RefSeq gene 3193559 3193879 . + . ID=gene-LU631_RS17025;Name=LU631_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17025;old_locus_tag=LU631_17025 NZ_CP089940.1 Protein Homology CDS 3193559 3193879 . + 0 ID=cds-WP_016189634.1;Parent=gene-LU631_RS17025;Dbxref=Genbank:WP_016189634.1;Name=WP_016189634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144828.1;locus_tag=LU631_RS17025;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_016189634.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3193869 3194147 . + . ID=gene-LU631_RS17030;Name=LU631_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17030;old_locus_tag=LU631_17030 NZ_CP089940.1 Protein Homology CDS 3193869 3194147 . + 0 ID=cds-WP_016189635.1;Parent=gene-LU631_RS17030;Dbxref=Genbank:WP_016189635.1;Name=WP_016189635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122144.1;locus_tag=LU631_RS17030;product=helix-turn-helix transcriptional regulator;protein_id=WP_016189635.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3194165 3194452 . + . ID=gene-LU631_RS17035;Name=LU631_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17035;old_locus_tag=LU631_17035 NZ_CP089940.1 GeneMarkS-2+ CDS 3194165 3194452 . + 0 ID=cds-WP_016189636.1;Parent=gene-LU631_RS17035;Dbxref=Genbank:WP_016189636.1;Name=WP_016189636.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS17035;product=hypothetical protein;protein_id=WP_016189636.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3194675 3195379 . + . ID=gene-LU631_RS17040;Name=LU631_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17040;old_locus_tag=LU631_17040 NZ_CP089940.1 Protein Homology CDS 3194675 3195379 . + 0 ID=cds-WP_046371935.1;Parent=gene-LU631_RS17040;Dbxref=Genbank:WP_046371935.1;Name=WP_046371935.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU631_RS17040;product=IS6 family transposase;protein_id=WP_046371935.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3195497 3196720 . + . ID=gene-LU631_RS17045;Name=LU631_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17045;old_locus_tag=LU631_17045 NZ_CP089940.1 Protein Homology CDS 3195497 3196720 . + 0 ID=cds-WP_046371936.1;Parent=gene-LU631_RS17045;Dbxref=Genbank:WP_046371936.1;Name=WP_046371936.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU631_RS17045;product=IS91 family transposase;protein_id=WP_046371936.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3196982 3197290 . - . ID=gene-LU631_RS17050;Name=LU631_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17050;old_locus_tag=LU631_17050 NZ_CP089940.1 Protein Homology CDS 3196982 3197290 . - 0 ID=cds-WP_016189638.1;Parent=gene-LU631_RS17050;Dbxref=Genbank:WP_016189638.1;Name=WP_016189638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017798924.1;locus_tag=LU631_RS17050;product=contact-dependent growth inhibition system immunity protein;protein_id=WP_016189638.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3197293 3198126 . - . ID=gene-LU631_RS17055;Name=LU631_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17055;old_locus_tag=LU631_17055 NZ_CP089940.1 Protein Homology CDS 3197293 3198126 . - 0 ID=cds-WP_016189639.1;Parent=gene-LU631_RS17055;Dbxref=Genbank:WP_016189639.1;Name=WP_016189639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013360143.1;locus_tag=LU631_RS17055;product=hypothetical protein;protein_id=WP_016189639.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3198350 3199573 . + . ID=gene-LU631_RS17060;Name=LU631_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17060;old_locus_tag=LU631_17060 NZ_CP089940.1 Protein Homology CDS 3198350 3199573 . + 0 ID=cds-WP_046371938.1;Parent=gene-LU631_RS17060;Dbxref=Genbank:WP_046371938.1;Name=WP_046371938.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU631_RS17060;product=IS91 family transposase;protein_id=WP_046371938.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3199896 3201101 . + . ID=gene-LU631_RS17065;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=LU631_RS17065;old_locus_tag=LU631_17065 NZ_CP089940.1 Protein Homology CDS 3199896 3201101 . + 0 ID=cds-WP_016189640.1;Parent=gene-LU631_RS17065;Dbxref=Genbank:WP_016189640.1;Name=WP_016189640.1;Ontology_term=GO:0019358,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=nicotinate nucleotide salvage|0019358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812313.1;locus_tag=LU631_RS17065;product=nicotinate phosphoribosyltransferase;protein_id=WP_016189640.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3201275 3202675 . + . ID=gene-LU631_RS17070;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=LU631_RS17070;old_locus_tag=LU631_17070 NZ_CP089940.1 Protein Homology CDS 3201275 3202675 . + 0 ID=cds-WP_016189641.1;Parent=gene-LU631_RS17070;Dbxref=Genbank:WP_016189641.1;Name=WP_016189641.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=LU631_RS17070;product=asparagine--tRNA ligase;protein_id=WP_016189641.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3202976 3204082 . + . ID=gene-LU631_RS17075;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=LU631_RS17075;old_locus_tag=LU631_17075 NZ_CP089940.1 Protein Homology CDS 3202976 3204082 . + 0 ID=cds-WP_016189642.1;Parent=gene-LU631_RS17075;Dbxref=Genbank:WP_016189642.1;Name=WP_016189642.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_119863614.1;locus_tag=LU631_RS17075;product=porin OmpC;protein_id=WP_016189642.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3204168 3204608 . - . ID=gene-LU631_RS17080;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS17080;old_locus_tag=LU631_17080;partial=true;pseudo=true;start_range=.,3204168 NZ_CP089940.1 Protein Homology CDS 3204168 3204608 . - 0 ID=cds-LU631_RS17080;Parent=gene-LU631_RS17080;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU631_RS17080;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,3204168;transl_table=11 NZ_CP089940.1 RefSeq gene 3204880 3206070 . + . ID=gene-LU631_RS17085;Name=LU631_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17085;old_locus_tag=LU631_17085 NZ_CP089940.1 Protein Homology CDS 3204880 3206070 . + 0 ID=cds-WP_016189645.1;Parent=gene-LU631_RS17085;Dbxref=Genbank:WP_016189645.1;Name=WP_016189645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816042.1;locus_tag=LU631_RS17085;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=WP_016189645.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3206602 3207048 . - . ID=gene-LU631_RS17090;Name=LU631_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17090;old_locus_tag=LU631_17090 NZ_CP089940.1 GeneMarkS-2+ CDS 3206602 3207048 . - 0 ID=cds-WP_152664172.1;Parent=gene-LU631_RS17090;Dbxref=Genbank:WP_152664172.1;Name=WP_152664172.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS17090;product=hypothetical protein;protein_id=WP_152664172.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3207183 3207812 . - . ID=gene-LU631_RS17095;Name=LU631_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17095;old_locus_tag=LU631_17095 NZ_CP089940.1 Protein Homology CDS 3207183 3207812 . - 0 ID=cds-WP_016189647.1;Parent=gene-LU631_RS17095;Dbxref=Genbank:WP_016189647.1;Name=WP_016189647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357330.1;locus_tag=LU631_RS17095;product=MBL fold metallo-hydrolase;protein_id=WP_016189647.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3207851 3208399 . - . ID=gene-LU631_RS17100;Name=LU631_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17100;old_locus_tag=LU631_17100 NZ_CP089940.1 Protein Homology CDS 3207851 3208399 . - 0 ID=cds-WP_016189648.1;Parent=gene-LU631_RS17100;Dbxref=Genbank:WP_016189648.1;Name=WP_016189648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849393.1;locus_tag=LU631_RS17100;product=YcbK family protein;protein_id=WP_016189648.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3208586 3210325 . - . ID=gene-LU631_RS17105;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=LU631_RS17105;old_locus_tag=LU631_17105 NZ_CP089940.1 Protein Homology CDS 3208586 3210325 . - 0 ID=cds-WP_232426823.1;Parent=gene-LU631_RS17105;Dbxref=Genbank:WP_232426823.1;Name=WP_232426823.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713308.1;locus_tag=LU631_RS17105;product=L%2CD-transpeptidase;protein_id=WP_232426823.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3210575 3215038 . - . ID=gene-LU631_RS17110;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=LU631_RS17110;old_locus_tag=LU631_17110 NZ_CP089940.1 Protein Homology CDS 3210575 3215038 . - 0 ID=cds-WP_016189650.1;Parent=gene-LU631_RS17110;Dbxref=Genbank:WP_016189650.1;Name=WP_016189650.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189650.1;locus_tag=LU631_RS17110;product=chromosome partition protein MukB;protein_id=WP_016189650.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3215031 3215747 . - . ID=gene-LU631_RS17115;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=LU631_RS17115;old_locus_tag=LU631_17115 NZ_CP089940.1 Protein Homology CDS 3215031 3215747 . - 0 ID=cds-WP_016189651.1;Parent=gene-LU631_RS17115;Dbxref=Genbank:WP_016189651.1;Name=WP_016189651.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004385487.1;locus_tag=LU631_RS17115;product=chromosome partition protein MukE;protein_id=WP_016189651.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3215728 3217050 . - . ID=gene-LU631_RS17120;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=LU631_RS17120;old_locus_tag=LU631_17120 NZ_CP089940.1 Protein Homology CDS 3215728 3217050 . - 0 ID=cds-WP_016189652.1;Parent=gene-LU631_RS17120;Dbxref=Genbank:WP_016189652.1;Name=WP_016189652.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=LU631_RS17120;product=chromosome partition protein MukF;protein_id=WP_016189652.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3217043 3217831 . - . ID=gene-LU631_RS17125;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=LU631_RS17125;old_locus_tag=LU631_17125 NZ_CP089940.1 Protein Homology CDS 3217043 3217831 . - 0 ID=cds-WP_016189653.1;Parent=gene-LU631_RS17125;Dbxref=Genbank:WP_016189653.1;Name=WP_016189653.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169371.1;locus_tag=LU631_RS17125;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_016189653.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3217960 3218733 . + . ID=gene-LU631_RS17130;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=LU631_RS17130;old_locus_tag=LU631_17130 NZ_CP089940.1 Protein Homology CDS 3217960 3218733 . + 0 ID=cds-WP_016189654.1;Parent=gene-LU631_RS17130;Dbxref=Genbank:WP_016189654.1;Name=WP_016189654.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201536.1;locus_tag=LU631_RS17130;product=envelope biogenesis factor ElyC;protein_id=WP_016189654.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3218863 3219075 . - . ID=gene-LU631_RS17135;Name=LU631_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17135;old_locus_tag=LU631_17135 NZ_CP089940.1 GeneMarkS-2+ CDS 3218863 3219075 . - 0 ID=cds-WP_016189655.1;Parent=gene-LU631_RS17135;Dbxref=Genbank:WP_016189655.1;Name=WP_016189655.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS17135;product=hypothetical protein;protein_id=WP_016189655.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3219376 3219807 . - . ID=gene-LU631_RS26145;Name=LU631_RS26145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26145 NZ_CP089940.1 Protein Homology CDS 3219376 3219807 . - 0 ID=cds-WP_046372013.1-6;Parent=gene-LU631_RS26145;Dbxref=Genbank:WP_046372013.1;Name=WP_046372013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26145;product=IS91 family transposase;protein_id=WP_046372013.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3219819 3220589 . - . ID=gene-LU631_RS26150;Name=LU631_RS26150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26150 NZ_CP089940.1 Protein Homology CDS 3219819 3220589 . - 0 ID=cds-WP_267921497.1-7;Parent=gene-LU631_RS26150;Dbxref=Genbank:WP_267921497.1;Name=WP_267921497.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26150;product=transposase zinc-binding domain-containing protein;protein_id=WP_267921497.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3220598 3220933 . - . ID=gene-LU631_RS17145;Name=LU631_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17145;old_locus_tag=LU631_17145 NZ_CP089940.1 GeneMarkS-2+ CDS 3220598 3220933 . - 0 ID=cds-WP_052734695.1-11;Parent=gene-LU631_RS17145;Dbxref=Genbank:WP_052734695.1;Name=WP_052734695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS17145;product=hypothetical protein;protein_id=WP_052734695.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3221449 3222195 . - . ID=gene-LU631_RS17150;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=LU631_RS17150;old_locus_tag=LU631_17150 NZ_CP089940.1 Protein Homology CDS 3221449 3222195 . - 0 ID=cds-WP_016189657.1;Parent=gene-LU631_RS17150;Dbxref=Genbank:WP_016189657.1;Name=WP_016189657.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704633.1;locus_tag=LU631_RS17150;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_016189657.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3222192 3222374 . - . ID=gene-LU631_RS17155;Name=LU631_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17155;old_locus_tag=LU631_17155 NZ_CP089940.1 Protein Homology CDS 3222192 3222374 . - 0 ID=cds-WP_016189658.1;Parent=gene-LU631_RS17155;Dbxref=Genbank:WP_016189658.1;Name=WP_016189658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013508517.1;locus_tag=LU631_RS17155;product=hypothetical protein;protein_id=WP_016189658.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3222459 3222599 . - . ID=gene-LU631_RS17160;Name=LU631_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17160;old_locus_tag=LU631_17160 NZ_CP089940.1 GeneMarkS-2+ CDS 3222459 3222599 . - 0 ID=cds-WP_016189659.1;Parent=gene-LU631_RS17160;Dbxref=Genbank:WP_016189659.1;Name=WP_016189659.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS17160;product=hypothetical protein;protein_id=WP_016189659.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3222671 3224015 . + . ID=gene-LU631_RS17165;Name=LU631_RS17165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17165;old_locus_tag=LU631_17165;pseudo=true NZ_CP089940.1 Protein Homology CDS 3222671 3224015 . + 0 ID=cds-LU631_RS17165;Parent=gene-LU631_RS17165;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS17165;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3224050 3225090 . - . ID=gene-LU631_RS17170;Name=LU631_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17170;old_locus_tag=LU631_17170 NZ_CP089940.1 Protein Homology CDS 3224050 3225090 . - 0 ID=cds-WP_046371791.1-17;Parent=gene-LU631_RS17170;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS17170;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3225169 3226302 . - . ID=gene-LU631_RS17175;Name=LU631_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17175;old_locus_tag=LU631_17175 NZ_CP089940.1 Protein Homology CDS 3225169 3226302 . - 0 ID=cds-WP_052734699.1;Parent=gene-LU631_RS17175;Dbxref=Genbank:WP_052734699.1;Name=WP_052734699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201532.1;locus_tag=LU631_RS17175;product=winged helix DNA-binding domain-containing protein;protein_id=WP_052734699.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3226346 3227326 . - . ID=gene-LU631_RS17180;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=LU631_RS17180;old_locus_tag=LU631_17180 NZ_CP089940.1 Protein Homology CDS 3226346 3227326 . - 0 ID=cds-WP_016189661.1;Parent=gene-LU631_RS17180;Dbxref=Genbank:WP_016189661.1;Name=WP_016189661.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802465.1;locus_tag=LU631_RS17180;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_016189661.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3227319 3229070 . - . ID=gene-LU631_RS17185;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=LU631_RS17185;old_locus_tag=LU631_17185 NZ_CP089940.1 Protein Homology CDS 3227319 3229070 . - 0 ID=cds-WP_016189662.1;Parent=gene-LU631_RS17185;Dbxref=Genbank:WP_016189662.1;Name=WP_016189662.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309024.1;locus_tag=LU631_RS17185;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_016189662.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3229105 3231363 . - . ID=gene-LU631_RS17190;Name=LU631_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17190;old_locus_tag=LU631_17190 NZ_CP089940.1 Protein Homology CDS 3229105 3231363 . - 0 ID=cds-WP_016189663.1;Parent=gene-LU631_RS17190;Dbxref=Genbank:WP_016189663.1;Name=WP_016189663.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201529.1;locus_tag=LU631_RS17190;product=ComEC family protein;protein_id=WP_016189663.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3231675 3232094 . - . ID=gene-LU631_RS17195;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS17195;old_locus_tag=LU631_17195;pseudo=true NZ_CP089940.1 Protein Homology CDS 3231675 3232094 . - 0 ID=cds-LU631_RS17195;Parent=gene-LU631_RS17195;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU631_RS17195;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3232275 3232559 . - . ID=gene-LU631_RS17200;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=LU631_RS17200;old_locus_tag=LU631_17200 NZ_CP089940.1 Protein Homology CDS 3232275 3232559 . - 0 ID=cds-WP_016189665.1;Parent=gene-LU631_RS17200;Dbxref=Genbank:WP_016189665.1;Name=WP_016189665.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfB;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=LU631_RS17200;product=integration host factor subunit beta;protein_id=WP_016189665.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3232648 3234321 . - . ID=gene-LU631_RS17205;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=LU631_RS17205;old_locus_tag=LU631_17205 NZ_CP089940.1 Protein Homology CDS 3232648 3234321 . - 0 ID=cds-WP_016189666.1;Parent=gene-LU631_RS17205;Dbxref=Genbank:WP_016189666.1;Name=WP_016189666.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=LU631_RS17205;product=30S ribosomal protein S1;protein_id=WP_016189666.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3234425 3235108 . - . ID=gene-LU631_RS17210;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=LU631_RS17210;old_locus_tag=LU631_17210 NZ_CP089940.1 Protein Homology CDS 3234425 3235108 . - 0 ID=cds-WP_016189667.1;Parent=gene-LU631_RS17210;Dbxref=Genbank:WP_016189667.1;Name=WP_016189667.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309020.1;locus_tag=LU631_RS17210;product=(d)CMP kinase;protein_id=WP_016189667.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3235294 3236580 . - . ID=gene-LU631_RS17215;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=LU631_RS17215;old_locus_tag=LU631_17215 NZ_CP089940.1 Protein Homology CDS 3235294 3236580 . - 0 ID=cds-WP_016189668.1;Parent=gene-LU631_RS17215;Dbxref=Genbank:WP_016189668.1;Name=WP_016189668.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668558.1;locus_tag=LU631_RS17215;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_016189668.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3236663 3237748 . - . ID=gene-LU631_RS17220;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=LU631_RS17220;old_locus_tag=LU631_17220 NZ_CP089940.1 Protein Homology CDS 3236663 3237748 . - 0 ID=cds-WP_016189669.1;Parent=gene-LU631_RS17220;Dbxref=Genbank:WP_016189669.1;Name=WP_016189669.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441862.1;locus_tag=LU631_RS17220;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_016189669.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3238057 3239814 . + . ID=gene-LU631_RS17225;Name=LU631_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17225;old_locus_tag=LU631_17225 NZ_CP089940.1 Protein Homology CDS 3238057 3239814 . + 0 ID=cds-WP_016189670.1;Parent=gene-LU631_RS17225;Dbxref=Genbank:WP_016189670.1;Name=WP_016189670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169356.1;locus_tag=LU631_RS17225;product=30S ribosomal protein S12 methylthiotransferase accessory protein YcaO;protein_id=WP_016189670.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3240181 3241035 . + . ID=gene-LU631_RS17230;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=LU631_RS17230;old_locus_tag=LU631_17230 NZ_CP089940.1 Protein Homology CDS 3240181 3241035 . + 0 ID=cds-WP_016189671.1;Parent=gene-LU631_RS17230;Dbxref=Genbank:WP_016189671.1;Name=WP_016189671.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211331.1;locus_tag=LU631_RS17230;product=formate transporter FocA;protein_id=WP_016189671.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3241115 3243397 . + . ID=gene-LU631_RS17235;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=LU631_RS17235;old_locus_tag=LU631_17235 NZ_CP089940.1 Protein Homology CDS 3241115 3243397 . + 0 ID=cds-WP_016189672.1;Parent=gene-LU631_RS17235;Dbxref=Genbank:WP_016189672.1;Name=WP_016189672.1;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=LU631_RS17235;product=formate C-acetyltransferase;protein_id=WP_016189672.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3243551 3244291 . + . ID=gene-LU631_RS17240;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=LU631_RS17240;old_locus_tag=LU631_17240 NZ_CP089940.1 Protein Homology CDS 3243551 3244291 . + 0 ID=cds-WP_016189673.1;Parent=gene-LU631_RS17240;Dbxref=Genbank:WP_016189673.1;Name=WP_016189673.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226110.1;locus_tag=LU631_RS17240;product=pyruvate formate lyase 1-activating protein;protein_id=WP_016189673.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3244319 3245470 . - . ID=gene-LU631_RS17245;Name=LU631_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17245;old_locus_tag=LU631_17245 NZ_CP089940.1 Protein Homology CDS 3244319 3245470 . - 0 ID=cds-WP_016189674.1;Parent=gene-LU631_RS17245;Dbxref=Genbank:WP_016189674.1;Name=WP_016189674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831279.1;locus_tag=LU631_RS17245;product=MFS transporter;protein_id=WP_016189674.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3245801 3247093 . - . ID=gene-LU631_RS17250;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=LU631_RS17250;old_locus_tag=LU631_17250 NZ_CP089940.1 Protein Homology CDS 3245801 3247093 . - 0 ID=cds-WP_016189675.1;Parent=gene-LU631_RS17250;Dbxref=Genbank:WP_016189675.1;Name=WP_016189675.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006116.1;locus_tag=LU631_RS17250;product=serine--tRNA ligase;protein_id=WP_016189675.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3247185 3248474 . - . ID=gene-LU631_RS17255;Name=LU631_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17255;old_locus_tag=LU631_17255 NZ_CP089940.1 Protein Homology CDS 3247185 3248474 . - 0 ID=cds-WP_046372255.1;Parent=gene-LU631_RS17255;Dbxref=Genbank:WP_046372255.1;Name=WP_046372255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201517.1;locus_tag=LU631_RS17255;product=replication-associated recombination protein A;protein_id=WP_046372255.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3248540 3249151 . - . ID=gene-LU631_RS17260;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=LU631_RS17260;old_locus_tag=LU631_17260 NZ_CP089940.1 Protein Homology CDS 3248540 3249151 . - 0 ID=cds-WP_016189677.1;Parent=gene-LU631_RS17260;Dbxref=Genbank:WP_016189677.1;Name=WP_016189677.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226102.1;locus_tag=LU631_RS17260;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_016189677.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3249356 3252685 . - . ID=gene-LU631_RS17265;Name=LU631_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17265;old_locus_tag=LU631_17265 NZ_CP089940.1 Protein Homology CDS 3249356 3252685 . - 0 ID=cds-WP_040465274.1;Parent=gene-LU631_RS17265;Dbxref=Genbank:WP_040465274.1;Name=WP_040465274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025228.1;locus_tag=LU631_RS17265;product=DNA translocase FtsK 4TM domain-containing protein;protein_id=WP_040465274.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3252804 3253298 . - . ID=gene-LU631_RS17270;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=LU631_RS17270;old_locus_tag=LU631_17270 NZ_CP089940.1 Protein Homology CDS 3252804 3253298 . - 0 ID=cds-WP_006118610.1;Parent=gene-LU631_RS17270;Dbxref=Genbank:WP_006118610.1;Name=WP_006118610.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=LU631_RS17270;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_006118610.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3253416 3253733 . + . ID=gene-LU631_RS17275;Name=LU631_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17275;old_locus_tag=LU631_17275 NZ_CP089940.1 GeneMarkS-2+ CDS 3253416 3253733 . + 0 ID=cds-WP_152664173.1;Parent=gene-LU631_RS17275;Dbxref=Genbank:WP_152664173.1;Name=WP_152664173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS17275;product=hypothetical protein;protein_id=WP_152664173.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3253827 3254795 . + . ID=gene-LU631_RS17280;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=LU631_RS17280;old_locus_tag=LU631_17280 NZ_CP089940.1 Protein Homology CDS 3253827 3254795 . + 0 ID=cds-WP_016189679.1;Parent=gene-LU631_RS17280;Dbxref=Genbank:WP_016189679.1;Name=WP_016189679.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849329.1;locus_tag=LU631_RS17280;product=thioredoxin-disulfide reductase;protein_id=WP_016189679.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3254937 3256697 . + . ID=gene-LU631_RS17285;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=LU631_RS17285;old_locus_tag=LU631_17285 NZ_CP089940.1 Protein Homology CDS 3254937 3256697 . + 0 ID=cds-WP_040465275.1;Parent=gene-LU631_RS17285;Dbxref=Genbank:WP_040465275.1;Name=WP_040465275.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156890.1;locus_tag=LU631_RS17285;product=cysteine/glutathione ABC transporter permease/ATP-binding protein CydD;protein_id=WP_040465275.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3256701 3258428 . + . ID=gene-LU631_RS17290;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=LU631_RS17290;old_locus_tag=LU631_17290 NZ_CP089940.1 Protein Homology CDS 3256701 3258428 . + 0 ID=cds-WP_016189681.1;Parent=gene-LU631_RS17290;Dbxref=Genbank:WP_016189681.1;Name=WP_016189681.1;Ontology_term=GO:0034775,GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=glutathione transmembrane transport|0034775||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543874.1;locus_tag=LU631_RS17290;product=cysteine/glutathione ABC transporter ATP-binding protein/permease CydC;protein_id=WP_016189681.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3258461 3259153 . + . ID=gene-LU631_RS17295;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=LU631_RS17295;old_locus_tag=LU631_17295 NZ_CP089940.1 Protein Homology CDS 3258461 3259153 . + 0 ID=cds-WP_016189682.1;Parent=gene-LU631_RS17295;Dbxref=Genbank:WP_016189682.1;Name=WP_016189682.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668571.1;locus_tag=LU631_RS17295;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_016189682.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3259501 3259719 . + . ID=gene-LU631_RS17300;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=LU631_RS17300;old_locus_tag=LU631_17300 NZ_CP089940.1 Protein Homology CDS 3259501 3259719 . + 0 ID=cds-WP_002211347.1;Parent=gene-LU631_RS17300;Dbxref=Genbank:WP_002211347.1;Name=WP_002211347.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=LU631_RS17300;product=translation initiation factor IF-1;protein_id=WP_002211347.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3259804 3262080 . - . ID=gene-LU631_RS17305;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=LU631_RS17305;old_locus_tag=LU631_17305 NZ_CP089940.1 Protein Homology CDS 3259804 3262080 . - 0 ID=cds-WP_016189683.1;Parent=gene-LU631_RS17305;Dbxref=Genbank:WP_016189683.1;Name=WP_016189683.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156887.1;locus_tag=LU631_RS17305;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_016189683.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3262109 3262429 . - . ID=gene-LU631_RS17310;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=LU631_RS17310;old_locus_tag=LU631_17310 NZ_CP089940.1 Protein Homology CDS 3262109 3262429 . - 0 ID=cds-WP_016189684.1;Parent=gene-LU631_RS17310;Dbxref=Genbank:WP_016189684.1;Name=WP_016189684.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=LU631_RS17310;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_016189684.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3262752 3262947 . + . ID=gene-LU631_RS17315;Name=cspD;end_range=3262947,.;gbkey=Gene;gene=cspD;gene_biotype=pseudogene;locus_tag=LU631_RS17315;old_locus_tag=LU631_17315;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3262752 3262947 . + 0 ID=cds-LU631_RS17315;Parent=gene-LU631_RS17315;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008156,GO:0009409;end_range=3262947,.;gbkey=CDS;gene=cspD;go_process=negative regulation of DNA replication|0008156||IEA,response to cold|0009409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003230776.1;locus_tag=LU631_RS17315;partial=true;product=cold shock domain-containing protein CspD;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3264020 3264597 . + . ID=gene-LU631_RS17320;Name=LU631_RS17320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17320;old_locus_tag=LU631_17320;pseudo=true NZ_CP089940.1 Protein Homology CDS 3264020 3264597 . + 0 ID=cds-LU631_RS17320;Parent=gene-LU631_RS17320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201502.1;locus_tag=LU631_RS17320;product=DUF3828 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3264799 3265527 . + . ID=gene-LU631_RS17325;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=LU631_RS17325;old_locus_tag=LU631_17325 NZ_CP089940.1 Protein Homology CDS 3264799 3265527 . + 0 ID=cds-WP_016189689.1;Parent=gene-LU631_RS17325;Dbxref=Genbank:WP_016189689.1;Name=WP_016189689.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=artP;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308974.1;locus_tag=LU631_RS17325;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_016189689.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3265542 3266273 . + . ID=gene-LU631_RS17330;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=LU631_RS17330;old_locus_tag=LU631_17330 NZ_CP089940.1 Protein Homology CDS 3265542 3266273 . + 0 ID=cds-WP_016189690.1;Parent=gene-LU631_RS17330;Dbxref=Genbank:WP_016189690.1;Name=WP_016189690.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295339.1;locus_tag=LU631_RS17330;product=arginine ABC transporter substrate-binding protein;protein_id=WP_016189690.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3266281 3267003 . + . ID=gene-LU631_RS17335;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=LU631_RS17335;old_locus_tag=LU631_17335 NZ_CP089940.1 Protein Homology CDS 3266281 3267003 . + 0 ID=cds-WP_016189691.1;Parent=gene-LU631_RS17335;Dbxref=Genbank:WP_016189691.1;Name=WP_016189691.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415383.1;locus_tag=LU631_RS17335;product=arginine ABC transporter permease ArtQ;protein_id=WP_016189691.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3266997 3267665 . + . ID=gene-LU631_RS17340;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=LU631_RS17340;old_locus_tag=LU631_17340 NZ_CP089940.1 Protein Homology CDS 3266997 3267665 . + 0 ID=cds-WP_016189692.1;Parent=gene-LU631_RS17340;Dbxref=Genbank:WP_016189692.1;Name=WP_016189692.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014729230.1;locus_tag=LU631_RS17340;product=arginine ABC transporter permease ArtM;protein_id=WP_016189692.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3267813 3268322 . + . ID=gene-LU631_RS17345;Name=LU631_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17345;old_locus_tag=LU631_17345 NZ_CP089940.1 Protein Homology CDS 3267813 3268322 . + 0 ID=cds-WP_016189693.1;Parent=gene-LU631_RS17345;Dbxref=Genbank:WP_016189693.1;Name=WP_016189693.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.2;locus_tag=LU631_RS17345;product=transporter substrate-binding domain-containing protein;protein_id=WP_016189693.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3268220 3268441 . + . ID=gene-LU631_RS26155;Name=LU631_RS26155;end_range=3268441,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS26155;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3268220 3268441 . + 0 ID=cds-LU631_RS26155;Parent=gene-LU631_RS26155;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3268441,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.2;locus_tag=LU631_RS26155;partial=true;product=transporter substrate-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3268506 3269633 . - . ID=gene-LU631_RS17350;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=LU631_RS17350;old_locus_tag=LU631_17350 NZ_CP089940.1 Protein Homology CDS 3268506 3269633 . - 0 ID=cds-WP_040465371.1;Parent=gene-LU631_RS17350;Dbxref=Genbank:WP_040465371.1;Name=WP_040465371.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017347000.1;locus_tag=LU631_RS17350;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_040465371.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3269777 3270474 . + . ID=gene-LU631_RS17355;Name=LU631_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17355;old_locus_tag=LU631_17355 NZ_CP089940.1 Protein Homology CDS 3269777 3270026 . + 0 ID=cds-WP_233481927.1;Parent=gene-LU631_RS17355;Dbxref=Genbank:WP_233481927.1;Name=WP_233481927.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS17355;product=IS1 family transposase;protein_id=WP_233481927.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 3270026 3270474 . + 2 ID=cds-WP_233481927.1;Parent=gene-LU631_RS17355;Dbxref=Genbank:WP_233481927.1;Name=WP_233481927.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS17355;product=IS1 family transposase;protein_id=WP_233481927.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3270415 3270615 . - . ID=gene-LU631_RS17360;Name=LU631_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17360;old_locus_tag=LU631_17360 NZ_CP089940.1 Protein Homology CDS 3270415 3270615 . - 0 ID=cds-WP_233482031.1;Parent=gene-LU631_RS17360;Dbxref=Genbank:WP_233482031.1;Name=WP_233482031.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022226.2;locus_tag=LU631_RS17360;product=DUF2593 family protein;protein_id=WP_233482031.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3270596 3270820 . - . ID=gene-LU631_RS17365;Name=LU631_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17365;old_locus_tag=LU631_17365 NZ_CP089940.1 Protein Homology CDS 3270596 3270820 . - 0 ID=cds-WP_232426801.1;Parent=gene-LU631_RS17365;Dbxref=Genbank:WP_232426801.1;Name=WP_232426801.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022226.2;locus_tag=LU631_RS17365;product=DUF2593 family protein;protein_id=WP_232426801.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3271258 3271488 . + . ID=gene-LU631_RS17370;Name=LU631_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17370;old_locus_tag=LU631_17370 NZ_CP089940.1 Protein Homology CDS 3271258 3271488 . + 0 ID=cds-WP_087949657.1;Parent=gene-LU631_RS17370;Dbxref=Genbank:WP_087949657.1;Name=WP_087949657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015873644.1;locus_tag=LU631_RS17370;product=hypothetical protein;protein_id=WP_087949657.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3271551 3271901 . - . ID=gene-LU631_RS17375;Name=LU631_RS17375;end_range=3271901,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17375;old_locus_tag=LU631_17375;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3271551 3271901 . - 0 ID=cds-LU631_RS17375;Parent=gene-LU631_RS17375;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3271901,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611902.1;locus_tag=LU631_RS17375;partial=true;product=ISNCY family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3272614 3272913 . + . ID=gene-LU631_RS17380;Name=LU631_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17380;old_locus_tag=LU631_17380 NZ_CP089940.1 GeneMarkS-2+ CDS 3272614 3272913 . + 0 ID=cds-WP_233481928.1;Parent=gene-LU631_RS17380;Dbxref=Genbank:WP_233481928.1;Name=WP_233481928.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS17380;product=hypothetical protein;protein_id=WP_233481928.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3273296 3273775 . - . ID=gene-LU631_RS17385;Name=LU631_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17385;old_locus_tag=LU631_17385 NZ_CP089940.1 Protein Homology CDS 3273296 3273775 . - 0 ID=cds-WP_016189698.1;Parent=gene-LU631_RS17385;Dbxref=Genbank:WP_016189698.1;Name=WP_016189698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201489.1;locus_tag=LU631_RS17385;product=YbjN domain-containing protein;protein_id=WP_016189698.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3273993 3274715 . - . ID=gene-LU631_RS17390;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=LU631_RS17390;old_locus_tag=LU631_17390 NZ_CP089940.1 Protein Homology CDS 3273993 3274715 . - 0 ID=cds-WP_016189699.1;Parent=gene-LU631_RS17390;Dbxref=Genbank:WP_016189699.1;Name=WP_016189699.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012068493.1;locus_tag=LU631_RS17390;product=oxygen-insensitive NADPH nitroreductase;protein_id=WP_016189699.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3275241 3275504 . + . ID=gene-LU631_RS17395;Name=LU631_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17395;old_locus_tag=LU631_17395 NZ_CP089940.1 Protein Homology CDS 3275241 3275504 . + 0 ID=cds-WP_016189700.1;Parent=gene-LU631_RS17395;Dbxref=Genbank:WP_016189700.1;Name=WP_016189700.1;Ontology_term=GO:0097573;gbkey=CDS;go_function=glutathione oxidoreductase activity|0097573||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668594.1;locus_tag=LU631_RS17395;product=GrxA family glutaredoxin;protein_id=WP_016189700.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3275768 3276124 . - . ID=gene-LU631_RS17400;Name=ybjM;gbkey=Gene;gene=ybjM;gene_biotype=protein_coding;locus_tag=LU631_RS17400;old_locus_tag=LU631_17400 NZ_CP089940.1 Protein Homology CDS 3275768 3276124 . - 0 ID=cds-WP_016189701.1;Parent=gene-LU631_RS17400;Dbxref=Genbank:WP_016189701.1;Name=WP_016189701.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybjM;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201484.1;locus_tag=LU631_RS17400;product=inner membrane protein YbjM;protein_id=WP_016189701.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3276504 3278152 . + . ID=gene-LU631_RS17405;Name=LU631_RS17405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17405;old_locus_tag=LU631_17405;pseudo=true NZ_CP089940.1 Protein Homology CDS 3276504 3278152 . + 0 ID=cds-LU631_RS17405;Parent=gene-LU631_RS17405;Note=frameshifted%3B internal stop;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=LU631_RS17405;product=aspartate:alanine antiporter;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3278173 3279188 . - . ID=gene-LU631_RS17410;Name=LU631_RS17410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17410;old_locus_tag=LU631_17410;pseudo=true NZ_CP089940.1 Protein Homology CDS 3278173 3279188 . - 0 ID=cds-LU631_RS17410;Parent=gene-LU631_RS17410;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU631_RS17410;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3279661 3280260 . + . ID=gene-LU631_RS17415;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=LU631_RS17415;old_locus_tag=LU631_17415 NZ_CP089940.1 Protein Homology CDS 3279661 3280260 . + 0 ID=cds-WP_016189706.1;Parent=gene-LU631_RS17415;Dbxref=Genbank:WP_016189706.1;Name=WP_016189706.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017346979.1;locus_tag=LU631_RS17415;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_016189706.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3280446 3281318 . - . ID=gene-LU631_RS17420;Name=LU631_RS17420;end_range=3281318,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17420;old_locus_tag=LU631_17420;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3280446 3281318 . - 0 ID=cds-LU631_RS17420;Parent=gene-LU631_RS17420;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3281318,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668599.1;locus_tag=LU631_RS17420;partial=true;product=serine-type D-Ala-D-Ala carboxypeptidase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3281297 3281566 . + . ID=gene-LU631_RS17425;Name=LU631_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17425;old_locus_tag=LU631_17425 NZ_CP089940.1 Protein Homology CDS 3281297 3281566 . + 0 ID=cds-WP_016189707.1;Parent=gene-LU631_RS17425;Dbxref=Genbank:WP_016189707.1;Name=WP_016189707.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024122.2;locus_tag=LU631_RS17425;product=haloacid dehalogenase-like hydrolase;protein_id=WP_016189707.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3281899 3283227 . + . ID=gene-LU631_RS17430;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=LU631_RS17430;old_locus_tag=LU631_17430 NZ_CP089940.1 Protein Homology CDS 3281899 3283227 . + 0 ID=cds-WP_016189708.1;Parent=gene-LU631_RS17430;Dbxref=Genbank:WP_016189708.1;Name=WP_016189708.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201476.1;locus_tag=LU631_RS17430;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_016189708.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3283396 3283841 . - . ID=gene-LU631_RS17435;Name=LU631_RS17435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17435;old_locus_tag=LU631_17435;pseudo=true NZ_CP089940.1 Protein Homology CDS 3283396 3283841 . - 0 ID=cds-LU631_RS17435;Parent=gene-LU631_RS17435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172647.1;locus_tag=LU631_RS17435;product=DUF4385 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3283846 3284751 . - . ID=gene-LU631_RS17440;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=LU631_RS17440;old_locus_tag=LU631_17440 NZ_CP089940.1 Protein Homology CDS 3283846 3284751 . - 0 ID=cds-WP_016189711.1;Parent=gene-LU631_RS17440;Dbxref=Genbank:WP_016189711.1;Name=WP_016189711.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013508456.1;locus_tag=LU631_RS17440;product=glutathione ABC transporter permease GsiD;protein_id=WP_016189711.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3284761 3285681 . - . ID=gene-LU631_RS17445;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=LU631_RS17445;old_locus_tag=LU631_17445 NZ_CP089940.1 Protein Homology CDS 3284761 3285681 . - 0 ID=cds-WP_016189712.1;Parent=gene-LU631_RS17445;Dbxref=Genbank:WP_016189712.1;Name=WP_016189712.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225998.1;locus_tag=LU631_RS17445;product=glutathione ABC transporter permease GsiC;protein_id=WP_016189712.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3285744 3287276 . - . ID=gene-LU631_RS17450;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=LU631_RS17450;old_locus_tag=LU631_17450 NZ_CP089940.1 Protein Homology CDS 3285744 3287276 . - 0 ID=cds-WP_016189713.1;Parent=gene-LU631_RS17450;Dbxref=Genbank:WP_016189713.1;Name=WP_016189713.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802405.1;locus_tag=LU631_RS17450;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_016189713.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3287319 3289175 . - . ID=gene-LU631_RS17455;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=LU631_RS17455;old_locus_tag=LU631_17455 NZ_CP089940.1 Protein Homology CDS 3287319 3289175 . - 0 ID=cds-WP_232426802.1;Parent=gene-LU631_RS17455;Dbxref=Genbank:WP_232426802.1;Name=WP_232426802.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201471.1;locus_tag=LU631_RS17455;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_232426802.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3289178 3290146 . - . ID=gene-LU631_RS17460;Name=LU631_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17460;old_locus_tag=LU631_17460 NZ_CP089940.1 Protein Homology CDS 3289178 3290146 . - 0 ID=cds-WP_016189715.1;Parent=gene-LU631_RS17460;Dbxref=Genbank:WP_016189715.1;Name=WP_016189715.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852309.1;locus_tag=LU631_RS17460;product=isoaspartyl peptidase/L-asparaginase;protein_id=WP_016189715.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3290484 3291722 . + . ID=gene-LU631_RS17465;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=LU631_RS17465;old_locus_tag=LU631_17465 NZ_CP089940.1 Protein Homology CDS 3290484 3291722 . + 0 ID=cds-WP_016189716.1;Parent=gene-LU631_RS17465;Dbxref=Genbank:WP_016189716.1;Name=WP_016189716.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172367.1;locus_tag=LU631_RS17465;product=molybdopterin molybdotransferase MoeA;protein_id=WP_016189716.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3291724 3292491 . + . ID=gene-LU631_RS17470;Name=LU631_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17470;old_locus_tag=LU631_17470 NZ_CP089940.1 Protein Homology CDS 3291724 3292491 . + 0 ID=cds-WP_016189717.1;Parent=gene-LU631_RS17470;Dbxref=Genbank:WP_016189717.1;Name=WP_016189717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802401.1;locus_tag=LU631_RS17470;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_016189717.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3293022 3294614 . - . ID=gene-LU631_RS17475;Name=LU631_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17475;old_locus_tag=LU631_17475 NZ_CP089940.1 Protein Homology CDS 3293022 3294614 . - 0 ID=cds-WP_016189718.1;Parent=gene-LU631_RS17475;Dbxref=Genbank:WP_016189718.1;Name=WP_016189718.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156829.1;locus_tag=LU631_RS17475;product=ABC-F family ATPase;protein_id=WP_016189718.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3295373 3295798 . - . ID=gene-LU631_RS17480;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS17480;old_locus_tag=LU631_17480 NZ_CP089940.1 Protein Homology CDS 3295373 3295798 . - 0 ID=cds-WP_046371944.1;Parent=gene-LU631_RS17480;Dbxref=Genbank:WP_046371944.1;Name=WP_046371944.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190995.1;locus_tag=LU631_RS17480;product=IS200/IS605 family transposase;protein_id=WP_046371944.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3295984 3296148 . - . ID=gene-LU631_RS17485;Name=LU631_RS17485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17485;old_locus_tag=LU631_17485;partial=true;pseudo=true;start_range=.,3295984 NZ_CP089940.1 Protein Homology CDS 3295984 3296148 . - 0 ID=cds-LU631_RS17485;Parent=gene-LU631_RS17485;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011069623.1;locus_tag=LU631_RS17485;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,3295984;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3296310 3296627 . - . ID=gene-LU631_RS17490;Name=tnpA;end_range=3296627,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS17490;old_locus_tag=LU631_17490;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3296310 3296627 . - 0 ID=cds-LU631_RS17490;Parent=gene-LU631_RS17490;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=3296627,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=LU631_RS17490;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3296748 3296909 . + . ID=gene-LU631_RS17495;Name=LU631_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17495;old_locus_tag=LU631_17495 NZ_CP089940.1 Protein Homology CDS 3296748 3296909 . + 0 ID=cds-WP_232426824.1;Parent=gene-LU631_RS17495;Dbxref=Genbank:WP_232426824.1;Name=WP_232426824.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022362.2;locus_tag=LU631_RS17495;product=DUF2778 domain-containing protein;protein_id=WP_232426824.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3296848 3298404 . - . ID=gene-LU631_RS17500;Name=LU631_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17500;old_locus_tag=LU631_17500 NZ_CP089940.1 Protein Homology CDS 3296848 3298404 . - 0 ID=cds-WP_016189722.1;Parent=gene-LU631_RS17500;Dbxref=Genbank:WP_016189722.1;Name=WP_016189722.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201465.1;locus_tag=LU631_RS17500;product=efflux transporter outer membrane subunit;protein_id=WP_016189722.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3298406 3299974 . - . ID=gene-LU631_RS17505;Name=LU631_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17505;old_locus_tag=LU631_17505 NZ_CP089940.1 Protein Homology CDS 3298406 3299974 . - 0 ID=cds-WP_016189723.1;Parent=gene-LU631_RS17505;Dbxref=Genbank:WP_016189723.1;Name=WP_016189723.1;Ontology_term=GO:0006855,GO:0009410,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441915.1;locus_tag=LU631_RS17505;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_016189723.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3299971 3301089 . - . ID=gene-LU631_RS17510;Name=LU631_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17510;old_locus_tag=LU631_17510 NZ_CP089940.1 Protein Homology CDS 3299971 3301089 . - 0 ID=cds-WP_071598857.1;Parent=gene-LU631_RS17510;Dbxref=Genbank:WP_071598857.1;Name=WP_071598857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201463.1;locus_tag=LU631_RS17510;product=HlyD family secretion protein;protein_id=WP_071598857.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3301197 3302312 . - . ID=gene-LU631_RS17515;Name=LU631_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17515;old_locus_tag=LU631_17515 NZ_CP089940.1 Protein Homology CDS 3301197 3302312 . - 0 ID=cds-WP_040465283.1;Parent=gene-LU631_RS17515;Dbxref=Genbank:WP_040465283.1;Name=WP_040465283.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593277.1;locus_tag=LU631_RS17515;product=SLC13 family permease;protein_id=WP_040465283.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3302337 3302789 . - . ID=gene-LU631_RS17520;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=LU631_RS17520;old_locus_tag=LU631_17520 NZ_CP089940.1 Protein Homology CDS 3302337 3302789 . - 0 ID=cds-WP_016189726.1;Parent=gene-LU631_RS17520;Dbxref=Genbank:WP_016189726.1;Name=WP_016189726.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189726.1;locus_tag=LU631_RS17520;product=manganese-binding transcriptional regulator MntR;protein_id=WP_016189726.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3303124 3303636 . - . ID=gene-LU631_RS17525;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=LU631_RS17525;old_locus_tag=LU631_17525 NZ_CP089940.1 Protein Homology CDS 3303124 3303636 . - 0 ID=cds-WP_016189727.1;Parent=gene-LU631_RS17525;Dbxref=Genbank:WP_016189727.1;Name=WP_016189727.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357252.1;locus_tag=LU631_RS17525;product=outer membrane protein OmpX;protein_id=WP_016189727.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3303989 3304882 . + . ID=gene-LU631_RS17530;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=LU631_RS17530;old_locus_tag=LU631_17530 NZ_CP089940.1 Protein Homology CDS 3303989 3304882 . + 0 ID=cds-WP_016189728.1;Parent=gene-LU631_RS17530;Dbxref=Genbank:WP_016189728.1;Name=WP_016189728.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201459.1;locus_tag=LU631_RS17530;product=threonine/homoserine exporter RhtA;protein_id=WP_016189728.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3305219 3305722 . + . ID=gene-LU631_RS17535;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=LU631_RS17535;old_locus_tag=LU631_17535 NZ_CP089940.1 Protein Homology CDS 3305219 3305722 . + 0 ID=cds-WP_016189729.1;Parent=gene-LU631_RS17535;Dbxref=Genbank:WP_016189729.1;Name=WP_016189729.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225973.1;locus_tag=LU631_RS17535;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_016189729.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3306074 3306820 . + . ID=gene-LU631_RS17540;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=LU631_RS17540;old_locus_tag=LU631_17540 NZ_CP089940.1 Protein Homology CDS 3306074 3306820 . + 0 ID=cds-WP_016189730.1;Parent=gene-LU631_RS17540;Dbxref=Genbank:WP_016189730.1;Name=WP_016189730.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=glnH;go_component=membrane|0016020||IEA;go_function=ligand-gated ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459807.1;locus_tag=LU631_RS17540;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_016189730.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3306899 3307558 . + . ID=gene-LU631_RS17545;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=LU631_RS17545;old_locus_tag=LU631_17545 NZ_CP089940.1 Protein Homology CDS 3306899 3307558 . + 0 ID=cds-WP_016189731.1;Parent=gene-LU631_RS17545;Dbxref=Genbank:WP_016189731.1;Name=WP_016189731.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=LU631_RS17545;product=glutamine ABC transporter permease GlnP;protein_id=WP_016189731.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3307555 3308277 . + . ID=gene-LU631_RS17550;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=LU631_RS17550;old_locus_tag=LU631_17550 NZ_CP089940.1 Protein Homology CDS 3307555 3308277 . + 0 ID=cds-WP_016189732.1;Parent=gene-LU631_RS17550;Dbxref=Genbank:WP_016189732.1;Name=WP_016189732.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=LU631_RS17550;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_016189732.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3308615 3308818 . + . ID=gene-LU631_RS17555;Name=LU631_RS17555;end_range=3308818,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17555;old_locus_tag=LU631_17555;partial=true;pseudo=true;start_range=.,3308615 NZ_CP089940.1 Protein Homology CDS 3308615 3308818 . + 0 ID=cds-LU631_RS17555;Parent=gene-LU631_RS17555;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3308818,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161984.1;locus_tag=LU631_RS17555;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3308615;transl_table=11 NZ_CP089940.1 RefSeq gene 3309215 3309355 . + . ID=gene-LU631_RS17560;Name=LU631_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17560;old_locus_tag=LU631_17560 NZ_CP089940.1 GeneMarkS-2+ CDS 3309215 3309355 . + 0 ID=cds-WP_161796965.1-15;Parent=gene-LU631_RS17560;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS17560;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3309364 3310134 . + . ID=gene-LU631_RS26160;Name=LU631_RS26160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26160 NZ_CP089940.1 Protein Homology CDS 3309364 3310134 . + 0 ID=cds-WP_267921497.1-8;Parent=gene-LU631_RS26160;Dbxref=Genbank:WP_267921497.1;Name=WP_267921497.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26160;product=transposase zinc-binding domain-containing protein;protein_id=WP_267921497.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3310146 3310577 . + . ID=gene-LU631_RS26165;Name=LU631_RS26165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26165 NZ_CP089940.1 Protein Homology CDS 3310146 3310577 . + 0 ID=cds-WP_046372013.1-7;Parent=gene-LU631_RS26165;Dbxref=Genbank:WP_046372013.1;Name=WP_046372013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26165;product=IS91 family transposase;protein_id=WP_046372013.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3310730 3312160 . + . ID=gene-LU631_RS17570;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=pseudogene;locus_tag=LU631_RS17570;old_locus_tag=LU631_17570;partial=true;pseudo=true;start_range=.,3310730 NZ_CP089940.1 Protein Homology CDS 3310730 3312160 . + 0 ID=cds-LU631_RS17570;Parent=gene-LU631_RS17570;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799163.1;locus_tag=LU631_RS17570;partial=true;product=mechanosensitive channel protein;pseudo=true;start_range=.,3310730;transl_table=11 NZ_CP089940.1 RefSeq gene 3312170 3313081 . - . ID=gene-LU631_RS17575;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=LU631_RS17575;old_locus_tag=LU631_17575 NZ_CP089940.1 Protein Homology CDS 3312170 3313081 . - 0 ID=cds-WP_016189735.1;Parent=gene-LU631_RS17575;Dbxref=Genbank:WP_016189735.1;Name=WP_016189735.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668622.1;locus_tag=LU631_RS17575;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_016189735.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3313203 3313832 . + . ID=gene-LU631_RS17580;Name=LU631_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17580;old_locus_tag=LU631_17580 NZ_CP089940.1 Protein Homology CDS 3313203 3313832 . + 0 ID=cds-WP_016189736.1;Parent=gene-LU631_RS17580;Dbxref=Genbank:WP_016189736.1;Name=WP_016189736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008102556.1;locus_tag=LU631_RS17580;product=flavin reductase family protein;protein_id=WP_016189736.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3313925 3314446 . + . ID=gene-LU631_RS17585;Name=LU631_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17585;old_locus_tag=LU631_17585 NZ_CP089940.1 Protein Homology CDS 3313925 3314446 . + 0 ID=cds-WP_016189737.1;Parent=gene-LU631_RS17585;Dbxref=Genbank:WP_016189737.1;Name=WP_016189737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156800.1;locus_tag=LU631_RS17585;product=hypothetical protein;protein_id=WP_016189737.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3315505 3316676 . + . ID=gene-LU631_RS17590;Name=LU631_RS17590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17590;old_locus_tag=LU631_17590;pseudo=true NZ_CP089940.1 Protein Homology CDS 3315505 3316676 . + 0 ID=cds-LU631_RS17590;Parent=gene-LU631_RS17590;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156790.1;locus_tag=LU631_RS17590;product=M20 family metallopeptidase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3316762 3317250 . + . ID=gene-LU631_RS17595;Name=LU631_RS17595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17595;old_locus_tag=LU631_17595;pseudo=true NZ_CP089940.1 Protein Homology CDS 3316762 3317250 . + 0 ID=cds-LU631_RS17595;Parent=gene-LU631_RS17595;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009636153.1;locus_tag=LU631_RS17595;product=flavin reductase family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3317375 3318346 . - . ID=gene-LU631_RS17600;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=LU631_RS17600;old_locus_tag=LU631_17600 NZ_CP089940.1 Protein Homology CDS 3317375 3318346 . - 0 ID=cds-WP_016189741.1;Parent=gene-LU631_RS17600;Dbxref=Genbank:WP_016189741.1;Name=WP_016189741.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543822.1;locus_tag=LU631_RS17600;product=DNA-binding protein YbiB;protein_id=WP_016189741.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3318379 3320544 . - . ID=gene-LU631_RS17605;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=LU631_RS17605;old_locus_tag=LU631_17605 NZ_CP089940.1 Protein Homology CDS 3318379 3320544 . - 0 ID=cds-WP_016189742.1;Parent=gene-LU631_RS17605;Dbxref=Genbank:WP_016189742.1;Name=WP_016189742.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156788.1;locus_tag=LU631_RS17605;product=ATP-dependent DNA helicase DinG;protein_id=WP_016189742.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3321037 3321612 . - . ID=gene-LU631_RS17610;Name=LU631_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17610;old_locus_tag=LU631_17610 NZ_CP089940.1 Protein Homology CDS 3321037 3321612 . - 0 ID=cds-WP_016189743.1;Parent=gene-LU631_RS17610;Dbxref=Genbank:WP_016189743.1;Name=WP_016189743.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: protein motif:HMM:NF018068.2;locus_tag=LU631_RS17610;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_016189743.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3321853 3322371 . - . ID=gene-LU631_RS17615;Name=LU631_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17615;old_locus_tag=LU631_17615 NZ_CP089940.1 Protein Homology CDS 3321853 3322371 . - 0 ID=cds-WP_016189744.1;Parent=gene-LU631_RS17615;Dbxref=Genbank:WP_016189744.1;Name=WP_016189744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543820.1;locus_tag=LU631_RS17615;product=GNAT family N-acetyltransferase;protein_id=WP_016189744.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3322550 3323284 . + . ID=gene-LU631_RS17620;Name=LU631_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17620;old_locus_tag=LU631_17620 NZ_CP089940.1 Protein Homology CDS 3322550 3323284 . + 0 ID=cds-WP_016189745.1;Parent=gene-LU631_RS17620;Dbxref=Genbank:WP_016189745.1;Name=WP_016189745.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332303.1;locus_tag=LU631_RS17620;product=MerR family transcriptional regulator;protein_id=WP_016189745.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3323293 3323724 . + . ID=gene-LU631_RS17625;Name=LU631_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17625;old_locus_tag=LU631_17625 NZ_CP089940.1 Protein Homology CDS 3323293 3323724 . + 0 ID=cds-WP_016189746.1;Parent=gene-LU631_RS17625;Dbxref=Genbank:WP_016189746.1;Name=WP_016189746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668642.1;locus_tag=LU631_RS17625;product=nuclear transport factor 2 family protein;protein_id=WP_016189746.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3323721 3324437 . + . ID=gene-LU631_RS17630;Name=LU631_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17630;old_locus_tag=LU631_17630 NZ_CP089940.1 Protein Homology CDS 3323721 3324437 . + 0 ID=cds-WP_016189747.1;Parent=gene-LU631_RS17630;Dbxref=Genbank:WP_016189747.1;Name=WP_016189747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668643.1;locus_tag=LU631_RS17630;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_016189747.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3324440 3325717 . + . ID=gene-LU631_RS17635;Name=LU631_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17635;old_locus_tag=LU631_17635 NZ_CP089940.1 Protein Homology CDS 3324440 3325717 . + 0 ID=cds-WP_016189748.1;Parent=gene-LU631_RS17635;Dbxref=Genbank:WP_016189748.1;Name=WP_016189748.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172346.1;locus_tag=LU631_RS17635;product=FAD-dependent oxidoreductase;protein_id=WP_016189748.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3325714 3326427 . + . ID=gene-LU631_RS17640;Name=LU631_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17640;old_locus_tag=LU631_17640 NZ_CP089940.1 Protein Homology CDS 3325714 3326427 . + 0 ID=cds-WP_016189749.1;Parent=gene-LU631_RS17640;Dbxref=Genbank:WP_016189749.1;Name=WP_016189749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441950.1;locus_tag=LU631_RS17640;product=DUF1365 domain-containing protein;protein_id=WP_016189749.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3326431 3327666 . + . ID=gene-LU631_RS17645;Name=LU631_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17645;old_locus_tag=LU631_17645 NZ_CP089940.1 Protein Homology CDS 3326431 3327666 . + 0 ID=cds-WP_016189750.1;Parent=gene-LU631_RS17645;Dbxref=Genbank:WP_016189750.1;Name=WP_016189750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201415.1;locus_tag=LU631_RS17645;product=cyclopropane-fatty-acyl-phospholipid synthase family protein;protein_id=WP_016189750.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3327666 3328199 . + . ID=gene-LU631_RS17650;Name=LU631_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17650;old_locus_tag=LU631_17650 NZ_CP089940.1 Protein Homology CDS 3327666 3328199 . + 0 ID=cds-WP_016189751.1;Parent=gene-LU631_RS17650;Dbxref=Genbank:WP_016189751.1;Name=WP_016189751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169270.1;locus_tag=LU631_RS17650;product=DUF3833 domain-containing protein;protein_id=WP_016189751.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3328281 3328385 . + . ID=gene-LU631_RS17655;Name=LU631_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17655;old_locus_tag=LU631_17655 NZ_CP089940.1 Protein Homology CDS 3328281 3328385 . + 0 ID=cds-WP_016189752.1;Parent=gene-LU631_RS17655;Dbxref=Genbank:WP_016189752.1;Name=WP_016189752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001216962.1;locus_tag=LU631_RS17655;product=protein YohO;protein_id=WP_016189752.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3328533 3329697 . - . ID=gene-LU631_RS17660;Name=LU631_RS17660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17660;old_locus_tag=LU631_17660;pseudo=true NZ_CP089940.1 Protein Homology CDS 3328533 3329697 . - 0 ID=cds-LU631_RS17660;Parent=gene-LU631_RS17660;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612263.1;locus_tag=LU631_RS17660;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3329788 3330345 . - . ID=gene-LU631_RS17665;Name=idi;gbkey=Gene;gene=idi;gene_biotype=pseudogene;locus_tag=LU631_RS17665;old_locus_tag=LU631_17665;pseudo=true NZ_CP089940.1 Protein Homology CDS 3329788 3330345 . - 0 ID=cds-LU631_RS17665;Parent=gene-LU631_RS17665;Note=frameshifted;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441954.1;locus_tag=LU631_RS17665;product=isopentenyl-diphosphate Delta-isomerase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3330486 3331007 . - . ID=gene-LU631_RS17670;Name=LU631_RS17670;end_range=3331007,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17670;old_locus_tag=LU631_17670;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3330486 3331007 . - 0 ID=cds-LU631_RS17670;Parent=gene-LU631_RS17670;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007165,GO:0016020;end_range=3331007,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041744100.1;locus_tag=LU631_RS17670;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3331083 3332405 . + . ID=gene-LU631_RS17675;Name=LU631_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17675;old_locus_tag=LU631_17675 NZ_CP089940.1 Protein Homology CDS 3331083 3332405 . + 0 ID=cds-WP_046371868.1-2;Parent=gene-LU631_RS17675;Dbxref=Genbank:WP_046371868.1;Name=WP_046371868.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS17675;product=IS4 family transposase;protein_id=WP_046371868.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3332414 3333808 . - . ID=gene-LU631_RS17680;Name=LU631_RS17680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17680;old_locus_tag=LU631_17680;partial=true;pseudo=true;start_range=.,3332414 NZ_CP089940.1 Protein Homology CDS 3332414 3333808 . - 0 ID=cds-LU631_RS17680;Parent=gene-LU631_RS17680;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010254242.1;locus_tag=LU631_RS17680;partial=true;product=cache domain-containing protein;pseudo=true;start_range=.,3332414;transl_table=11 NZ_CP089940.1 RefSeq gene 3333934 3334800 . - . ID=gene-LU631_RS17685;Name=LU631_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17685;old_locus_tag=LU631_17685 NZ_CP089940.1 Protein Homology CDS 3333934 3334800 . - 0 ID=cds-WP_040465284.1;Parent=gene-LU631_RS17685;Dbxref=Genbank:WP_040465284.1;Name=WP_040465284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441956.1;locus_tag=LU631_RS17685;product=oxygenase MpaB family protein;protein_id=WP_040465284.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3335270 3337567 . - . ID=gene-LU631_RS17690;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=LU631_RS17690;old_locus_tag=LU631_17690 NZ_CP089940.1 Protein Homology CDS 3335270 3337567 . - 0 ID=cds-WP_016189756.1;Parent=gene-LU631_RS17690;Dbxref=Genbank:WP_016189756.1;Name=WP_016189756.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441957.1;locus_tag=LU631_RS17690;product=beta-glucosidase BglX;protein_id=WP_016189756.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3337752 3339164 . + . ID=gene-LU631_RS17695;Name=dld;end_range=3339164,.;gbkey=Gene;gene=dld;gene_biotype=pseudogene;locus_tag=LU631_RS17695;old_locus_tag=LU631_17695;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3337752 3339164 . + 0 ID=cds-LU631_RS17695;Parent=gene-LU631_RS17695;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006089,GO:0019516,GO:0016901;end_range=3339164,.;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA,lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827313.1;locus_tag=LU631_RS17695;partial=true;product=D-lactate dehydrogenase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3339238 3340402 . + . ID=gene-LU631_RS17700;Name=LU631_RS17700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17700;old_locus_tag=LU631_17700;pseudo=true NZ_CP089940.1 Protein Homology CDS 3339238 3340402 . + 0 ID=cds-LU631_RS17700;Parent=gene-LU631_RS17700;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612263.1;locus_tag=LU631_RS17700;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3340411 3340761 . + . ID=gene-LU631_RS17705;Name=LU631_RS17705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17705;old_locus_tag=LU631_17705;partial=true;pseudo=true;start_range=.,3340411 NZ_CP089940.1 Protein Homology CDS 3340411 3340761 . + 0 ID=cds-LU631_RS17705;Parent=gene-LU631_RS17705;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441958.1;locus_tag=LU631_RS17705;partial=true;product=D-lactate dehydrogenase;pseudo=true;start_range=.,3340411;transl_table=11 NZ_CP089940.1 RefSeq gene 3340987 3341160 . - . ID=gene-LU631_RS17710;Name=LU631_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17710;old_locus_tag=LU631_17710 NZ_CP089940.1 GeneMarkS-2+ CDS 3340987 3341160 . - 0 ID=cds-WP_157275205.1;Parent=gene-LU631_RS17710;Dbxref=Genbank:WP_157275205.1;Name=WP_157275205.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS17710;product=hypothetical protein;protein_id=WP_157275205.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3341254 3342114 . - . ID=gene-LU631_RS17715;Name=LU631_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17715;old_locus_tag=LU631_17715 NZ_CP089940.1 Protein Homology CDS 3341254 3342114 . - 0 ID=cds-WP_016189759.1;Parent=gene-LU631_RS17715;Dbxref=Genbank:WP_016189759.1;Name=WP_016189759.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012988780.1;locus_tag=LU631_RS17715;product=EamA family transporter;protein_id=WP_016189759.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3342107 3342772 . - . ID=gene-LU631_RS17720;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=LU631_RS17720;old_locus_tag=LU631_17720 NZ_CP089940.1 Protein Homology CDS 3342107 3342772 . - 0 ID=cds-WP_016189760.1;Parent=gene-LU631_RS17720;Dbxref=Genbank:WP_016189760.1;Name=WP_016189760.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015834505.1;locus_tag=LU631_RS17720;product=uracil phosphoribosyltransferase;protein_id=WP_016189760.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3342894 3343379 . + . ID=gene-LU631_RS17725;Name=LU631_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17725;old_locus_tag=LU631_17725 NZ_CP089940.1 Protein Homology CDS 3342894 3343379 . + 0 ID=cds-WP_040465285.1;Parent=gene-LU631_RS17725;Dbxref=Genbank:WP_040465285.1;Name=WP_040465285.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845814.1;locus_tag=LU631_RS17725;product=MarR family transcriptional regulator;protein_id=WP_040465285.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3343529 3347383 . + . ID=gene-LU631_RS17730;Name=LU631_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17730;old_locus_tag=LU631_17730 NZ_CP089940.1 Protein Homology CDS 3343529 3347383 . + 0 ID=cds-WP_016189762.1;Parent=gene-LU631_RS17730;Dbxref=Genbank:WP_016189762.1;Name=WP_016189762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892269.1;locus_tag=LU631_RS17730;product=amino acid adenylation domain-containing protein;protein_id=WP_016189762.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3347402 3348337 . + . ID=gene-LU631_RS17735;Name=LU631_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17735;old_locus_tag=LU631_17735 NZ_CP089940.1 Protein Homology CDS 3347402 3348337 . + 0 ID=cds-WP_040465379.1;Parent=gene-LU631_RS17735;Dbxref=Genbank:WP_040465379.1;Name=WP_040465379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012882833.1;locus_tag=LU631_RS17735;product=pseudouridine-5'-phosphate glycosidase;protein_id=WP_040465379.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3348359 3348586 . + . ID=gene-LU631_RS17740;Name=LU631_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17740;old_locus_tag=LU631_17740 NZ_CP089940.1 Protein Homology CDS 3348359 3348586 . + 0 ID=cds-WP_016189764.1;Parent=gene-LU631_RS17740;Dbxref=Genbank:WP_016189764.1;Name=WP_016189764.1;Ontology_term=GO:0006725,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: protein motif:HMM:NF013522.2;locus_tag=LU631_RS17740;product=tautomerase family protein;protein_id=WP_016189764.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3348847 3351285 . - . ID=gene-LU631_RS17745;Name=LU631_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17745;old_locus_tag=LU631_17745 NZ_CP089940.1 Protein Homology CDS 3348847 3351285 . - 0 ID=cds-WP_016189765.1;Parent=gene-LU631_RS17745;Dbxref=Genbank:WP_016189765.1;Name=WP_016189765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201399.1;locus_tag=LU631_RS17745;product=DUF3772 domain-containing protein;protein_id=WP_016189765.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3351379 3352320 . - . ID=gene-LU631_RS17750;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=LU631_RS17750;old_locus_tag=LU631_17750 NZ_CP089940.1 Protein Homology CDS 3351379 3352320 . - 0 ID=cds-WP_016189766.1;Parent=gene-LU631_RS17750;Dbxref=Genbank:WP_016189766.1;Name=WP_016189766.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463224.1;locus_tag=LU631_RS17750;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_016189766.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3352590 3353175 . - . ID=gene-LU631_RS17755;Name=LU631_RS17755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17755;old_locus_tag=LU631_17755;pseudo=true NZ_CP089940.1 Protein Homology CDS 3352590 3353175 . - 0 ID=cds-LU631_RS17755;Parent=gene-LU631_RS17755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014728500.1;locus_tag=LU631_RS17755;product=Yip1 family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3353447 3353919 . + . ID=gene-LU631_RS17760;Name=LU631_RS17760;end_range=3353919,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17760;old_locus_tag=LU631_17760;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3353447 3353919 . + 0 ID=cds-LU631_RS17760;Parent=gene-LU631_RS17760;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3353919,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201396.1;locus_tag=LU631_RS17760;partial=true;product=DedA family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3353926 3354330 . + . ID=gene-LU631_RS17765;Name=LU631_RS17765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS17765;old_locus_tag=LU631_17765;partial=true;pseudo=true;start_range=.,3353926 NZ_CP089940.1 Protein Homology CDS 3353926 3354330 . + 0 ID=cds-LU631_RS17765;Parent=gene-LU631_RS17765;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025127.1;locus_tag=LU631_RS17765;partial=true;product=glycoside hydrolase family 15 protein;pseudo=true;start_range=.,3353926;transl_table=11 NZ_CP089940.1 RefSeq gene 3354509 3355702 . + . ID=gene-LU631_RS17770;Name=LU631_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17770;old_locus_tag=LU631_17770 NZ_CP089940.1 Protein Homology CDS 3354509 3355702 . + 0 ID=cds-WP_046372256.1;Parent=gene-LU631_RS17770;Dbxref=Genbank:WP_046372256.1;Name=WP_046372256.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201393.1;locus_tag=LU631_RS17770;product=L%2CD-transpeptidase family protein;protein_id=WP_046372256.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3356765 3357748 . + . ID=gene-LU631_RS17775;Name=LU631_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17775;old_locus_tag=LU631_17775 NZ_CP089940.1 Protein Homology CDS 3356765 3357748 . + 0 ID=cds-WP_016189771.1;Parent=gene-LU631_RS17775;Dbxref=Genbank:WP_016189771.1;Name=WP_016189771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341641.1;locus_tag=LU631_RS17775;product=DUF1852 domain-containing protein;protein_id=WP_016189771.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3357775 3358806 . + . ID=gene-LU631_RS17780;Name=LU631_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17780;old_locus_tag=LU631_17780 NZ_CP089940.1 Protein Homology CDS 3357775 3358806 . + 0 ID=cds-WP_016189772.1;Parent=gene-LU631_RS17780;Dbxref=Genbank:WP_016189772.1;Name=WP_016189772.1;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004946619.1;locus_tag=LU631_RS17780;product=methionine synthase;protein_id=WP_016189772.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3358961 3359200 . - . ID=gene-LU631_RS17785;Name=LU631_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17785;old_locus_tag=LU631_17785 NZ_CP089940.1 GeneMarkS-2+ CDS 3358961 3359200 . - 0 ID=cds-WP_016189773.1;Parent=gene-LU631_RS17785;Dbxref=Genbank:WP_016189773.1;Name=WP_016189773.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS17785;product=hypothetical protein;protein_id=WP_016189773.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3359237 3360811 . - . ID=gene-LU631_RS17790;Name=LU631_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17790;old_locus_tag=LU631_17790 NZ_CP089940.1 Protein Homology CDS 3359237 3360811 . - 0 ID=cds-WP_040465381.1;Parent=gene-LU631_RS17790;Dbxref=Genbank:WP_040465381.1;Name=WP_040465381.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010247011.1;locus_tag=LU631_RS17790;product=methyl-accepting chemotaxis protein;protein_id=WP_040465381.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3360923 3361129 . + . ID=gene-LU631_RS17795;Name=LU631_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17795;old_locus_tag=LU631_17795 NZ_CP089940.1 GeneMarkS-2+ CDS 3360923 3361129 . + 0 ID=cds-WP_016189775.1;Parent=gene-LU631_RS17795;Dbxref=Genbank:WP_016189775.1;Name=WP_016189775.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS17795;product=hypothetical protein;protein_id=WP_016189775.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3361505 3362686 . - . ID=gene-LU631_RS17800;Name=LU631_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17800;old_locus_tag=LU631_17800 NZ_CP089940.1 Protein Homology CDS 3361505 3362686 . - 0 ID=cds-WP_040465382.1;Parent=gene-LU631_RS17800;Dbxref=Genbank:WP_040465382.1;Name=WP_040465382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201388.1;locus_tag=LU631_RS17800;product=MFS transporter;protein_id=WP_040465382.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3362885 3363826 . - . ID=gene-LU631_RS17805;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=LU631_RS17805;old_locus_tag=LU631_17805 NZ_CP089940.1 Protein Homology CDS 3362885 3363826 . - 0 ID=cds-WP_016189777.1;Parent=gene-LU631_RS17805;Dbxref=Genbank:WP_016189777.1;Name=WP_016189777.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228612.1;locus_tag=LU631_RS17805;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_016189777.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3363883 3365289 . - . ID=gene-LU631_RS17810;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=LU631_RS17810;old_locus_tag=LU631_17810 NZ_CP089940.1 Protein Homology CDS 3363883 3365289 . - 0 ID=cds-WP_016189778.1;Parent=gene-LU631_RS17810;Dbxref=Genbank:WP_016189778.1;Name=WP_016189778.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201386.1;locus_tag=LU631_RS17810;product=ATP-dependent RNA helicase RhlE;protein_id=WP_016189778.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3365597 3365980 . - . ID=gene-LU631_RS17815;Name=LU631_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17815;old_locus_tag=LU631_17815 NZ_CP089940.1 Protein Homology CDS 3365597 3365980 . - 0 ID=cds-WP_016189779.1;Parent=gene-LU631_RS17815;Dbxref=Genbank:WP_016189779.1;Name=WP_016189779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201381.1;locus_tag=LU631_RS17815;product=hypothetical protein;protein_id=WP_016189779.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3366706 3367416 . - . ID=gene-LU631_RS17820;Name=LU631_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17820;old_locus_tag=LU631_17820 NZ_CP089940.1 Protein Homology CDS 3366706 3367416 . - 0 ID=cds-WP_016189780.1;Parent=gene-LU631_RS17820;Dbxref=Genbank:WP_016189780.1;Name=WP_016189780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015700713.1;locus_tag=LU631_RS17820;product=Bax inhibitor-1/YccA family protein;protein_id=WP_016189780.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3367589 3368701 . - . ID=gene-LU631_RS17825;Name=LU631_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17825;old_locus_tag=LU631_17825 NZ_CP089940.1 Protein Homology CDS 3367589 3368701 . - 0 ID=cds-WP_016189781.1;Parent=gene-LU631_RS17825;Dbxref=Genbank:WP_016189781.1;Name=WP_016189781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201375.1;locus_tag=LU631_RS17825;product=DUF1615 domain-containing protein;protein_id=WP_016189781.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3368978 3369391 . - . ID=gene-LU631_RS17830;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=LU631_RS17830;old_locus_tag=LU631_17830 NZ_CP089940.1 Protein Homology CDS 3368978 3369391 . - 0 ID=cds-WP_046372257.1;Parent=gene-LU631_RS17830;Dbxref=Genbank:WP_046372257.1;Name=WP_046372257.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543799.1;locus_tag=LU631_RS17830;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_046372257.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3369432 3369677 . - . ID=gene-LU631_RS17835;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=LU631_RS17835;old_locus_tag=LU631_17835 NZ_CP089940.1 Protein Homology CDS 3369432 3369677 . - 0 ID=cds-WP_016189783.1;Parent=gene-LU631_RS17835;Dbxref=Genbank:WP_016189783.1;Name=WP_016189783.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441971.1;locus_tag=LU631_RS17835;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_016189783.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3369670 3370155 . - . ID=gene-LU631_RS17840;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=LU631_RS17840;old_locus_tag=LU631_17840 NZ_CP089940.1 Protein Homology CDS 3369670 3370155 . - 0 ID=cds-WP_016189784.1;Parent=gene-LU631_RS17840;Dbxref=Genbank:WP_016189784.1;Name=WP_016189784.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=LU631_RS17840;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_016189784.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3370159 3370674 . - . ID=gene-LU631_RS17845;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=LU631_RS17845;old_locus_tag=LU631_17845 NZ_CP089940.1 Protein Homology CDS 3370159 3370674 . - 0 ID=cds-WP_016189785.1;Parent=gene-LU631_RS17845;Dbxref=Genbank:WP_016189785.1;Name=WP_016189785.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201371.1;locus_tag=LU631_RS17845;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_016189785.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3370692 3371681 . - . ID=gene-LU631_RS17850;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=LU631_RS17850;old_locus_tag=LU631_17850 NZ_CP089940.1 Protein Homology CDS 3370692 3371681 . - 0 ID=cds-WP_087949661.1;Parent=gene-LU631_RS17850;Dbxref=Genbank:WP_087949661.1;Name=WP_087949661.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706659.2;locus_tag=LU631_RS17850;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_087949661.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3371738 3371956 . - . ID=gene-LU631_RS17855;Name=LU631_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17855;old_locus_tag=LU631_17855 NZ_CP089940.1 GeneMarkS-2+ CDS 3371738 3371956 . - 0 ID=cds-WP_016189787.1;Parent=gene-LU631_RS17855;Dbxref=Genbank:WP_016189787.1;Name=WP_016189787.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS17855;product=hypothetical protein;protein_id=WP_016189787.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3371971 3372879 . + . ID=gene-LU631_RS17860;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=LU631_RS17860;old_locus_tag=LU631_17860 NZ_CP089940.1 Protein Homology CDS 3371971 3372879 . + 0 ID=cds-WP_016189788.1;Parent=gene-LU631_RS17860;Dbxref=Genbank:WP_016189788.1;Name=WP_016189788.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831146.1;locus_tag=LU631_RS17860;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_016189788.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3373358 3375382 . - . ID=gene-LU631_RS17865;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=LU631_RS17865;old_locus_tag=LU631_17865 NZ_CP089940.1 Protein Homology CDS 3373358 3375382 . - 0 ID=cds-WP_016189789.1;Parent=gene-LU631_RS17865;Dbxref=Genbank:WP_016189789.1;Name=WP_016189789.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=LU631_RS17865;product=excinuclease ABC subunit UvrB;protein_id=WP_016189789.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3376260 3376979 . + . ID=gene-LU631_RS17870;Name=LU631_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17870;old_locus_tag=LU631_17870 NZ_CP089940.1 Protein Homology CDS 3376260 3376979 . + 0 ID=cds-WP_016189790.1;Parent=gene-LU631_RS17870;Dbxref=Genbank:WP_016189790.1;Name=WP_016189790.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851859.1;locus_tag=LU631_RS17870;product=ATP-binding cassette domain-containing protein;protein_id=WP_016189790.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3377386 3377775 . - . ID=gene-LU631_RS17875;Name=LU631_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17875;old_locus_tag=LU631_17875 NZ_CP089940.1 GeneMarkS-2+ CDS 3377386 3377775 . - 0 ID=cds-WP_152664179.1;Parent=gene-LU631_RS17875;Dbxref=Genbank:WP_152664179.1;Name=WP_152664179.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS17875;product=hypothetical protein;protein_id=WP_152664179.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3378072 3378746 . - . ID=gene-LU631_RS17880;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=LU631_RS17880;old_locus_tag=LU631_17880 NZ_CP089940.1 Protein Homology CDS 3378072 3378746 . - 0 ID=cds-WP_016189791.1;Parent=gene-LU631_RS17880;Dbxref=Genbank:WP_016189791.1;Name=WP_016189791.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799070.1;locus_tag=LU631_RS17880;product=dethiobiotin synthase;protein_id=WP_016189791.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3378739 3379497 . - . ID=gene-LU631_RS17885;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=LU631_RS17885;old_locus_tag=LU631_17885 NZ_CP089940.1 Protein Homology CDS 3378739 3379497 . - 0 ID=cds-WP_016189792.1;Parent=gene-LU631_RS17885;Dbxref=Genbank:WP_016189792.1;Name=WP_016189792.1;Ontology_term=GO:0009102,GO:0008171;gbkey=CDS;gene=bioC;go_function=O-methyltransferase activity|0008171||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156732.1;locus_tag=LU631_RS17885;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_016189792.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3379481 3380635 . - . ID=gene-LU631_RS17890;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=LU631_RS17890;old_locus_tag=LU631_17890 NZ_CP089940.1 Protein Homology CDS 3379481 3380635 . - 0 ID=cds-WP_016189793.1;Parent=gene-LU631_RS17890;Dbxref=Genbank:WP_016189793.1;Name=WP_016189793.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201364.1;locus_tag=LU631_RS17890;product=8-amino-7-oxononanoate synthase;protein_id=WP_016189793.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3380636 3381667 . - . ID=gene-LU631_RS17895;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=LU631_RS17895;old_locus_tag=LU631_17895 NZ_CP089940.1 Protein Homology CDS 3380636 3381667 . - 0 ID=cds-WP_016189794.1;Parent=gene-LU631_RS17895;Dbxref=Genbank:WP_016189794.1;Name=WP_016189794.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005745.1;locus_tag=LU631_RS17895;product=biotin synthase BioB;protein_id=WP_016189794.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3381758 3383059 . + . ID=gene-LU631_RS17900;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=LU631_RS17900;old_locus_tag=LU631_17900 NZ_CP089940.1 Protein Homology CDS 3381758 3383059 . + 0 ID=cds-WP_016189795.1;Parent=gene-LU631_RS17900;Dbxref=Genbank:WP_016189795.1;Name=WP_016189795.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201362.1;locus_tag=LU631_RS17900;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_016189795.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3383050 3384099 . - . ID=gene-LU631_RS17905;Name=LU631_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17905;old_locus_tag=LU631_17905 NZ_CP089940.1 Protein Homology CDS 3383050 3384099 . - 0 ID=cds-WP_016189796.1;Parent=gene-LU631_RS17905;Dbxref=Genbank:WP_016189796.1;Name=WP_016189796.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.2;locus_tag=LU631_RS17905;product=fimbrial protein;protein_id=WP_016189796.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3384122 3386635 . - . ID=gene-LU631_RS17910;Name=LU631_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17910;old_locus_tag=LU631_17910 NZ_CP089940.1 Protein Homology CDS 3384122 3386635 . - 0 ID=cds-WP_016189797.1;Parent=gene-LU631_RS17910;Dbxref=Genbank:WP_016189797.1;Name=WP_016189797.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012786.2;locus_tag=LU631_RS17910;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_016189797.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3386658 3387398 . - . ID=gene-LU631_RS17915;Name=LU631_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17915;old_locus_tag=LU631_17915 NZ_CP089940.1 Protein Homology CDS 3386658 3387398 . - 0 ID=cds-WP_051124325.1;Parent=gene-LU631_RS17915;Dbxref=Genbank:WP_051124325.1;Name=WP_051124325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168794.1;locus_tag=LU631_RS17915;product=molecular chaperone;protein_id=WP_051124325.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3387456 3388055 . - . ID=gene-LU631_RS17920;Name=LU631_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17920;old_locus_tag=LU631_17920 NZ_CP089940.1 Protein Homology CDS 3387456 3388055 . - 0 ID=cds-WP_016189799.1;Parent=gene-LU631_RS17920;Dbxref=Genbank:WP_016189799.1;Name=WP_016189799.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965725.1;locus_tag=LU631_RS17920;product=fimbrial protein;protein_id=WP_016189799.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3388676 3389719 . + . ID=gene-LU631_RS17925;Name=LU631_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17925;old_locus_tag=LU631_17925 NZ_CP089940.1 Protein Homology CDS 3388676 3389719 . + 0 ID=cds-WP_016189800.1;Parent=gene-LU631_RS17925;Dbxref=Genbank:WP_016189800.1;Name=WP_016189800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169230.1;locus_tag=LU631_RS17925;product=NADP-dependent oxidoreductase;protein_id=WP_016189800.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3389730 3390410 . + . ID=gene-LU631_RS17930;Name=LU631_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17930;old_locus_tag=LU631_17930 NZ_CP089940.1 Protein Homology CDS 3389730 3390410 . + 0 ID=cds-WP_016189801.1;Parent=gene-LU631_RS17930;Dbxref=Genbank:WP_016189801.1;Name=WP_016189801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014729283.1;locus_tag=LU631_RS17930;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_016189801.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3390426 3390914 . + . ID=gene-LU631_RS17935;Name=LU631_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17935;old_locus_tag=LU631_17935 NZ_CP089940.1 Protein Homology CDS 3390426 3390914 . + 0 ID=cds-WP_016189802.1;Parent=gene-LU631_RS17935;Dbxref=Genbank:WP_016189802.1;Name=WP_016189802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=LU631_RS17935;product=kinase inhibitor;protein_id=WP_016189802.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3390958 3391953 . - . ID=gene-LU631_RS17940;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=LU631_RS17940;old_locus_tag=LU631_17940 NZ_CP089940.1 Protein Homology CDS 3390958 3391953 . - 0 ID=cds-WP_016189803.1;Parent=gene-LU631_RS17940;Dbxref=Genbank:WP_016189803.1;Name=WP_016189803.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201358.1;locus_tag=LU631_RS17940;product=6-phosphogluconolactonase;protein_id=WP_016189803.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3392101 3392919 . + . ID=gene-LU631_RS17945;Name=LU631_RS17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17945;old_locus_tag=LU631_17945 NZ_CP089940.1 Protein Homology CDS 3392101 3392919 . + 0 ID=cds-WP_016189804.1;Parent=gene-LU631_RS17945;Dbxref=Genbank:WP_016189804.1;Name=WP_016189804.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001300666.1;locus_tag=LU631_RS17945;product=pyridoxal phosphatase;protein_id=WP_016189804.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3392925 3393983 . - . ID=gene-LU631_RS17950;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=LU631_RS17950;old_locus_tag=LU631_17950 NZ_CP089940.1 Protein Homology CDS 3392925 3393983 . - 0 ID=cds-WP_016189805.1;Parent=gene-LU631_RS17950;Dbxref=Genbank:WP_016189805.1;Name=WP_016189805.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851877.1;locus_tag=LU631_RS17950;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_016189805.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3393977 3394672 . - . ID=gene-LU631_RS17955;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=LU631_RS17955;old_locus_tag=LU631_17955 NZ_CP089940.1 Protein Homology CDS 3393977 3394672 . - 0 ID=cds-WP_040465288.1;Parent=gene-LU631_RS17955;Dbxref=Genbank:WP_040465288.1;Name=WP_040465288.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015700722.1;locus_tag=LU631_RS17955;product=molybdate ABC transporter permease subunit;protein_id=WP_040465288.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3394666 3395439 . - . ID=gene-LU631_RS17960;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=LU631_RS17960;old_locus_tag=LU631_17960 NZ_CP089940.1 Protein Homology CDS 3394666 3395439 . - 0 ID=cds-WP_016189807.1;Parent=gene-LU631_RS17960;Dbxref=Genbank:WP_016189807.1;Name=WP_016189807.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201354.1;locus_tag=LU631_RS17960;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_016189807.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3395586 3395741 . - . ID=gene-LU631_RS17965;Name=LU631_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17965;old_locus_tag=LU631_17965 NZ_CP089940.1 Protein Homology CDS 3395586 3395741 . - 0 ID=cds-WP_016189808.1;Parent=gene-LU631_RS17965;Dbxref=Genbank:WP_016189808.1;Name=WP_016189808.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007890616.1;locus_tag=LU631_RS17965;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_016189808.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3395933 3396382 . + . ID=gene-LU631_RS17970;Name=LU631_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17970;old_locus_tag=LU631_17970 NZ_CP089940.1 Protein Homology CDS 3395933 3396382 . + 0 ID=cds-WP_051124326.1;Parent=gene-LU631_RS17970;Dbxref=Genbank:WP_051124326.1;Name=WP_051124326.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LU631_RS17970;product=ATP-binding cassette domain-containing protein;protein_id=WP_051124326.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3396382 3396732 . + . ID=gene-LU631_RS17975;Name=LU631_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17975;old_locus_tag=LU631_17975 NZ_CP089940.1 GeneMarkS-2+ CDS 3396382 3396732 . + 0 ID=cds-WP_051124327.1;Parent=gene-LU631_RS17975;Dbxref=Genbank:WP_051124327.1;Name=WP_051124327.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS17975;product=hypothetical protein;protein_id=WP_051124327.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3396853 3397677 . - . ID=gene-LU631_RS17980;Name=LU631_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS17980;old_locus_tag=LU631_17980 NZ_CP089940.1 Protein Homology CDS 3396853 3397677 . - 0 ID=cds-WP_016189809.1;Parent=gene-LU631_RS17980;Dbxref=Genbank:WP_016189809.1;Name=WP_016189809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010670958.1;locus_tag=LU631_RS17980;product=SDR family oxidoreductase;protein_id=WP_016189809.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3397857 3397904 . + . ID=gene-LU631_RS17985;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=LU631_RS17985;old_locus_tag=LU631_17985 NZ_CP089940.1 Protein Homology CDS 3397857 3397904 . + 0 ID=cds-WP_118665699.1;Parent=gene-LU631_RS17985;Dbxref=Genbank:WP_118665699.1;Name=WP_118665699.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310846.1;locus_tag=LU631_RS17985;product=his operon leader peptide;protein_id=WP_118665699.1;transl_table=11 NZ_CP089940.1 cmsearch sequence_feature 3397880 3398001 . + . ID=id-NZ_CP089940.1:3397880..3398001;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP089940.1 RefSeq gene 3398069 3398968 . + . ID=gene-LU631_RS17990;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=LU631_RS17990;old_locus_tag=LU631_17990 NZ_CP089940.1 Protein Homology CDS 3398069 3398968 . + 0 ID=cds-WP_016189810.1;Parent=gene-LU631_RS17990;Dbxref=Genbank:WP_016189810.1;Name=WP_016189810.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=LU631_RS17990;product=ATP phosphoribosyltransferase;protein_id=WP_016189810.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3398972 3400279 . + . ID=gene-LU631_RS17995;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=LU631_RS17995;old_locus_tag=LU631_17995 NZ_CP089940.1 Protein Homology CDS 3398972 3400279 . + 0 ID=cds-WP_016189811.1;Parent=gene-LU631_RS17995;Dbxref=Genbank:WP_016189811.1;Name=WP_016189811.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202926.1;locus_tag=LU631_RS17995;product=histidinol dehydrogenase;protein_id=WP_016189811.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3400276 3401367 . + . ID=gene-LU631_RS18000;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=LU631_RS18000;old_locus_tag=LU631_18000 NZ_CP089940.1 Protein Homology CDS 3400276 3401367 . + 0 ID=cds-WP_016189812.1;Parent=gene-LU631_RS18000;Dbxref=Genbank:WP_016189812.1;Name=WP_016189812.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170178.1;locus_tag=LU631_RS18000;product=histidinol-phosphate transaminase;protein_id=WP_016189812.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3401364 3402431 . + . ID=gene-LU631_RS18005;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=LU631_RS18005;old_locus_tag=LU631_18005 NZ_CP089940.1 Protein Homology CDS 3401364 3402431 . + 0 ID=cds-WP_016189813.1;Parent=gene-LU631_RS18005;Dbxref=Genbank:WP_016189813.1;Name=WP_016189813.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=LU631_RS18005;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_016189813.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3402432 3403022 . + . ID=gene-LU631_RS18010;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=LU631_RS18010;old_locus_tag=LU631_18010 NZ_CP089940.1 Protein Homology CDS 3402432 3403022 . + 0 ID=cds-WP_016189814.1;Parent=gene-LU631_RS18010;Dbxref=Genbank:WP_016189814.1;Name=WP_016189814.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454370.1;locus_tag=LU631_RS18010;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_016189814.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3403028 3403765 . + . ID=gene-LU631_RS18015;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=LU631_RS18015;old_locus_tag=LU631_18015 NZ_CP089940.1 Protein Homology CDS 3403028 3403765 . + 0 ID=cds-WP_016189815.1;Parent=gene-LU631_RS18015;Dbxref=Genbank:WP_016189815.1;Name=WP_016189815.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014699664.1;locus_tag=LU631_RS18015;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_016189815.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3403747 3404523 . + . ID=gene-LU631_RS18020;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=LU631_RS18020;old_locus_tag=LU631_18020 NZ_CP089940.1 Protein Homology CDS 3403747 3404523 . + 0 ID=cds-WP_016189816.1;Parent=gene-LU631_RS18020;Dbxref=Genbank:WP_016189816.1;Name=WP_016189816.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310853.1;locus_tag=LU631_RS18020;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_016189816.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3404517 3405128 . + . ID=gene-LU631_RS18025;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=LU631_RS18025;old_locus_tag=LU631_18025 NZ_CP089940.1 Protein Homology CDS 3404517 3405128 . + 0 ID=cds-WP_016189817.1;Parent=gene-LU631_RS18025;Dbxref=Genbank:WP_016189817.1;Name=WP_016189817.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=LU631_RS18025;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_016189817.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3405451 3406107 . - . ID=gene-LU631_RS18030;Name=LU631_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18030;old_locus_tag=LU631_18030 NZ_CP089940.1 GeneMarkS-2+ CDS 3405451 3406107 . - 0 ID=cds-WP_233481929.1;Parent=gene-LU631_RS18030;Dbxref=Genbank:WP_233481929.1;Name=WP_233481929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS18030;product=hypothetical protein;protein_id=WP_233481929.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3406290 3407083 . - . ID=gene-LU631_RS18035;Name=LU631_RS18035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18035;old_locus_tag=LU631_18035;partial=true;pseudo=true;start_range=.,3406290 NZ_CP089940.1 Protein Homology CDS 3406290 3407083 . - 0 ID=cds-LU631_RS18035;Parent=gene-LU631_RS18035;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS18035;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,3406290;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3407848 3408264 . - . ID=gene-LU631_RS18040;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS18040;old_locus_tag=LU631_18040;pseudo=true NZ_CP089940.1 Protein Homology CDS 3407848 3408264 . - 0 ID=cds-LU631_RS18040;Parent=gene-LU631_RS18040;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190995.1;locus_tag=LU631_RS18040;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3408422 3409828 . - . ID=gene-LU631_RS18045;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=LU631_RS18045;old_locus_tag=LU631_18045 NZ_CP089940.1 Protein Homology CDS 3408422 3409828 . - 0 ID=cds-WP_016189823.1;Parent=gene-LU631_RS18045;Dbxref=Genbank:WP_016189823.1;Name=WP_016189823.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004571305.1;locus_tag=LU631_RS18045;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_016189823.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3410013 3410777 . - . ID=gene-LU631_RS18050;Name=LU631_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18050;old_locus_tag=LU631_18050 NZ_CP089940.1 Protein Homology CDS 3410013 3410777 . - 0 ID=cds-WP_016189824.1;Parent=gene-LU631_RS18050;Dbxref=Genbank:WP_016189824.1;Name=WP_016189824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509731.1;locus_tag=LU631_RS18050;product=ABC transporter ATP-binding protein;protein_id=WP_016189824.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3410785 3411510 . - . ID=gene-LU631_RS18055;Name=LU631_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18055;old_locus_tag=LU631_18055 NZ_CP089940.1 Protein Homology CDS 3410785 3411510 . - 0 ID=cds-WP_233480414.1;Parent=gene-LU631_RS18055;Dbxref=Genbank:WP_233480414.1;Name=WP_233480414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509732.1;locus_tag=LU631_RS18055;product=ABC transporter permease;protein_id=WP_233480414.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3411586 3412881 . - . ID=gene-LU631_RS18060;Name=LU631_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18060;old_locus_tag=LU631_18060 NZ_CP089940.1 Protein Homology CDS 3411586 3412881 . - 0 ID=cds-WP_016189826.1;Parent=gene-LU631_RS18060;Dbxref=Genbank:WP_016189826.1;Name=WP_016189826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509733.1;locus_tag=LU631_RS18060;product=hypothetical protein;protein_id=WP_016189826.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3412911 3413852 . - . ID=gene-LU631_RS18065;Name=LU631_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18065;old_locus_tag=LU631_18065 NZ_CP089940.1 Protein Homology CDS 3412911 3413852 . - 0 ID=cds-WP_046371948.1;Parent=gene-LU631_RS18065;Dbxref=Genbank:WP_046371948.1;Name=WP_046371948.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025025.2;locus_tag=LU631_RS18065;product=glycosyltransferase family 2 protein;protein_id=WP_046371948.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3413995 3414540 . - . ID=gene-LU631_RS18070;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=LU631_RS18070;old_locus_tag=LU631_18070 NZ_CP089940.1 Protein Homology CDS 3413995 3414540 . - 0 ID=cds-WP_016189828.1;Parent=gene-LU631_RS18070;Dbxref=Genbank:WP_016189828.1;Name=WP_016189828.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001100788.1;locus_tag=LU631_RS18070;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_016189828.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3414543 3415424 . - . ID=gene-LU631_RS18075;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=LU631_RS18075;old_locus_tag=LU631_18075 NZ_CP089940.1 Protein Homology CDS 3414543 3415424 . - 0 ID=cds-WP_016189829.1;Parent=gene-LU631_RS18075;Dbxref=Genbank:WP_016189829.1;Name=WP_016189829.1;Ontology_term=GO:0009243,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009089278.1;locus_tag=LU631_RS18075;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_016189829.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3415472 3416359 . - . ID=gene-LU631_RS18080;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=LU631_RS18080;old_locus_tag=LU631_18080 NZ_CP089940.1 Protein Homology CDS 3415472 3416359 . - 0 ID=cds-WP_016189830.1;Parent=gene-LU631_RS18080;Dbxref=Genbank:WP_016189830.1;Name=WP_016189830.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202943.1;locus_tag=LU631_RS18080;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_016189830.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3416359 3417438 . - . ID=gene-LU631_RS18085;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=LU631_RS18085;old_locus_tag=LU631_18085 NZ_CP089940.1 Protein Homology CDS 3416359 3417438 . - 0 ID=cds-WP_016189831.1;Parent=gene-LU631_RS18085;Dbxref=Genbank:WP_016189831.1;Name=WP_016189831.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001557078.1;locus_tag=LU631_RS18085;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_016189831.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3417997 3420809 . - . ID=gene-LU631_RS18090;Name=LU631_RS18090;end_range=3420809,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18090;old_locus_tag=LU631_18090;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3417997 3420809 . - 0 ID=cds-LU631_RS18090;Parent=gene-LU631_RS18090;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=3420809,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180430.1;locus_tag=LU631_RS18090;partial=true;product=Tn3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3421720 3422118 . + . ID=gene-LU631_RS18095;Name=LU631_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18095;old_locus_tag=LU631_18095 NZ_CP089940.1 GeneMarkS-2+ CDS 3421720 3422118 . + 0 ID=cds-WP_016189838.1;Parent=gene-LU631_RS18095;Dbxref=Genbank:WP_016189838.1;Name=WP_016189838.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS18095;product=hypothetical protein;protein_id=WP_016189838.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3422148 3422936 . + . ID=gene-LU631_RS18100;Name=LU631_RS18100;end_range=3422936,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18100;old_locus_tag=LU631_18100;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3422148 3422936 . + 0 ID=cds-LU631_RS18100;Parent=gene-LU631_RS18100;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3422936,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS18100;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3423655 3424668 . - . ID=gene-LU631_RS18105;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=LU631_RS18105;old_locus_tag=LU631_18105 NZ_CP089940.1 Protein Homology CDS 3423655 3424668 . - 0 ID=cds-WP_016189842.1;Parent=gene-LU631_RS18105;Dbxref=Genbank:WP_016189842.1;Name=WP_016189842.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006119856.1;locus_tag=LU631_RS18105;product=UDP-glucose 4-epimerase GalE;protein_id=WP_016189842.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3424721 3425617 . - . ID=gene-LU631_RS18110;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=LU631_RS18110;old_locus_tag=LU631_18110 NZ_CP089940.1 Protein Homology CDS 3424721 3425617 . - 0 ID=cds-WP_016189843.1;Parent=gene-LU631_RS18110;Dbxref=Genbank:WP_016189843.1;Name=WP_016189843.1;gbkey=CDS;gene=galF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000183060.1;locus_tag=LU631_RS18110;product=UTP--glucose-1-phosphate uridylyltransferase GalF;protein_id=WP_016189843.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3425811 3427151 . - . ID=gene-LU631_RS18115;Name=LU631_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18115;old_locus_tag=LU631_18115 NZ_CP089940.1 Protein Homology CDS 3425811 3427151 . - 0 ID=cds-WP_016189844.1;Parent=gene-LU631_RS18115;Dbxref=Genbank:WP_016189844.1;Name=WP_016189844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667717.1;locus_tag=LU631_RS18115;product=oligosaccharide flippase family protein;protein_id=WP_016189844.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3427148 3428371 . - . ID=gene-LU631_RS18120;Name=LU631_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18120;old_locus_tag=LU631_18120 NZ_CP089940.1 Protein Homology CDS 3427148 3428371 . - 0 ID=cds-WP_016189845.1;Parent=gene-LU631_RS18120;Dbxref=Genbank:WP_016189845.1;Name=WP_016189845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158313.1;locus_tag=LU631_RS18120;product=glycosyltransferase;protein_id=WP_016189845.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3428376 3429623 . - . ID=gene-LU631_RS18125;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=LU631_RS18125;old_locus_tag=LU631_18125 NZ_CP089940.1 Protein Homology CDS 3428376 3429623 . - 0 ID=cds-WP_016189846.1;Parent=gene-LU631_RS18125;Dbxref=Genbank:WP_016189846.1;Name=WP_016189846.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170200.1;locus_tag=LU631_RS18125;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_016189846.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3429772 3431988 . - . ID=gene-LU631_RS18130;Name=LU631_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18130;old_locus_tag=LU631_18130 NZ_CP089940.1 Protein Homology CDS 3429772 3431988 . - 0 ID=cds-WP_016189847.1;Parent=gene-LU631_RS18130;Dbxref=Genbank:WP_016189847.1;Name=WP_016189847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170201.1;locus_tag=LU631_RS18130;product=phage tailspike protein;protein_id=WP_016189847.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3432171 3433205 . - . ID=gene-LU631_RS18135;Name=LU631_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18135;old_locus_tag=LU631_18135 NZ_CP089940.1 Protein Homology CDS 3432171 3433205 . - 0 ID=cds-WP_016189848.1;Parent=gene-LU631_RS18135;Dbxref=Genbank:WP_016189848.1;Name=WP_016189848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006119866.1;locus_tag=LU631_RS18135;product=glycosyltransferase;protein_id=WP_016189848.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3433324 3434076 . - . ID=gene-LU631_RS18140;Name=LU631_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18140;old_locus_tag=LU631_18140 NZ_CP089940.1 Protein Homology CDS 3433324 3434076 . - 0 ID=cds-WP_016189849.1;Parent=gene-LU631_RS18140;Dbxref=Genbank:WP_016189849.1;Name=WP_016189849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358461.1;locus_tag=LU631_RS18140;product=glycosyltransferase family 2 protein;protein_id=WP_016189849.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3434144 3435271 . - . ID=gene-LU631_RS18145;Name=LU631_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18145;old_locus_tag=LU631_18145 NZ_CP089940.1 Protein Homology CDS 3434144 3435271 . - 0 ID=cds-WP_016189850.1;Parent=gene-LU631_RS18145;Dbxref=Genbank:WP_016189850.1;Name=WP_016189850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441066.1;locus_tag=LU631_RS18145;product=EpsG family protein;protein_id=WP_016189850.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3435315 3436220 . - . ID=gene-LU631_RS18150;Name=LU631_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18150;old_locus_tag=LU631_18150 NZ_CP089940.1 Protein Homology CDS 3435315 3436220 . - 0 ID=cds-WP_016189851.1;Parent=gene-LU631_RS18150;Dbxref=Genbank:WP_016189851.1;Name=WP_016189851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202956.1;locus_tag=LU631_RS18150;product=glycosyltransferase family 2 protein;protein_id=WP_016189851.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3436325 3438508 . - . ID=gene-LU631_RS18155;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=LU631_RS18155;old_locus_tag=LU631_18155 NZ_CP089940.1 Protein Homology CDS 3436325 3438508 . - 0 ID=cds-WP_016189852.1;Parent=gene-LU631_RS18155;Dbxref=Genbank:WP_016189852.1;Name=WP_016189852.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014538791.1;locus_tag=LU631_RS18155;product=tyrosine-protein kinase Wzc;protein_id=WP_016189852.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3438521 3438955 . - . ID=gene-LU631_RS18160;Name=LU631_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18160;old_locus_tag=LU631_18160 NZ_CP089940.1 Protein Homology CDS 3438521 3438955 . - 0 ID=cds-WP_016189853.1;Parent=gene-LU631_RS18160;Dbxref=Genbank:WP_016189853.1;Name=WP_016189853.1;Note=Wzb shows phosphatase activity towards the autophosphorylated Wzc protein%2C which induces colanic acid biosynthesis%3B catalyzes the phosphorylation of UDP-glucose dehydrogenase%2C an enzyme involved in colanic acid biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667708.1;locus_tag=LU631_RS18160;product=protein-tyrosine-phosphatase;protein_id=WP_016189853.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3438971 3440104 . - . ID=gene-LU631_RS18165;Name=LU631_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18165;old_locus_tag=LU631_18165 NZ_CP089940.1 Protein Homology CDS 3438971 3440104 . - 0 ID=cds-WP_016189854.1;Parent=gene-LU631_RS18165;Dbxref=Genbank:WP_016189854.1;Name=WP_016189854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000978094.1;locus_tag=LU631_RS18165;product=polysaccharide export protein;protein_id=WP_016189854.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3440376 3441809 . - . ID=gene-LU631_RS18170;Name=wbaP;gbkey=Gene;gene=wbaP;gene_biotype=protein_coding;locus_tag=LU631_RS18170;old_locus_tag=LU631_18170 NZ_CP089940.1 Protein Homology CDS 3440376 3441809 . - 0 ID=cds-WP_016189855.1;Parent=gene-LU631_RS18170;Dbxref=Genbank:WP_016189855.1;Name=WP_016189855.1;Ontology_term=GO:0000271,GO:0016740,GO:0016020;gbkey=CDS;gene=wbaP;go_component=membrane|0016020||IEA;go_function=transferase activity|0016740||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158333.1;locus_tag=LU631_RS18170;product=undecaprenyl-phosphate galactose phosphotransferase WbaP;protein_id=WP_016189855.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3442536 3443233 . - . ID=gene-LU631_RS18175;Name=LU631_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18175;old_locus_tag=LU631_18175 NZ_CP089940.1 Protein Homology CDS 3442984 3443233 . - 0 ID=cds-WP_233481930.1;Parent=gene-LU631_RS18175;Dbxref=Genbank:WP_233481930.1;Name=WP_233481930.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS18175;product=IS1 family transposase;protein_id=WP_233481930.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 3442536 3442984 . - 2 ID=cds-WP_233481930.1;Parent=gene-LU631_RS18175;Dbxref=Genbank:WP_233481930.1;Name=WP_233481930.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS18175;product=IS1 family transposase;protein_id=WP_233481930.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3443361 3443742 . + . ID=gene-LU631_RS18180;Name=LU631_RS18180;end_range=3443742,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18180;old_locus_tag=LU631_18180;partial=true;pseudo=true;start_range=.,3443361 NZ_CP089940.1 Protein Homology CDS 3443361 3443742 . + 0 ID=cds-LU631_RS18180;Parent=gene-LU631_RS18180;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3443742,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004386758.1;locus_tag=LU631_RS18180;partial=true;product=CBS domain-containing protein;pseudo=true;start_range=.,3443361;transl_table=11 NZ_CP089940.1 RefSeq gene 3443847 3445652 . - . ID=gene-LU631_RS18185;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=LU631_RS18185;old_locus_tag=LU631_18185 NZ_CP089940.1 Protein Homology CDS 3443847 3445652 . - 0 ID=cds-WP_040465389.1;Parent=gene-LU631_RS18185;Dbxref=Genbank:WP_040465389.1;Name=WP_040465389.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202962.1;locus_tag=LU631_RS18185;product=outer membrane assembly protein AsmA;protein_id=WP_040465389.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3445717 3446298 . - . ID=gene-LU631_RS18190;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=LU631_RS18190;old_locus_tag=LU631_18190 NZ_CP089940.1 Protein Homology CDS 3445717 3446298 . - 0 ID=cds-WP_016189859.1;Parent=gene-LU631_RS18190;Dbxref=Genbank:WP_016189859.1;Name=WP_016189859.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=LU631_RS18190;product=dCTP deaminase;protein_id=WP_016189859.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3446405 3447046 . - . ID=gene-LU631_RS18195;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=LU631_RS18195;old_locus_tag=LU631_18195 NZ_CP089940.1 Protein Homology CDS 3446405 3447046 . - 0 ID=cds-WP_016189860.1;Parent=gene-LU631_RS18195;Dbxref=Genbank:WP_016189860.1;Name=WP_016189860.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211872.1;locus_tag=LU631_RS18195;product=uridine kinase;protein_id=WP_016189860.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3447294 3447890 . + . ID=gene-LU631_RS18200;Name=LU631_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18200;old_locus_tag=LU631_18200 NZ_CP089940.1 Protein Homology CDS 3447294 3447890 . + 0 ID=cds-WP_046372258.1;Parent=gene-LU631_RS18200;Dbxref=Genbank:WP_046372258.1;Name=WP_046372258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800252.1;locus_tag=LU631_RS18200;product=phosphatase PAP2 family protein;protein_id=WP_046372258.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3448637 3448816 . + . ID=gene-LU631_RS18205;Name=LU631_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18205;old_locus_tag=LU631_18205 NZ_CP089940.1 GeneMarkS-2+ CDS 3448637 3448816 . + 0 ID=cds-WP_232426804.1;Parent=gene-LU631_RS18205;Dbxref=Genbank:WP_232426804.1;Name=WP_232426804.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS18205;product=hypothetical protein;protein_id=WP_232426804.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3448874 3449068 . + . ID=gene-LU631_RS18210;Name=LU631_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18210;old_locus_tag=LU631_18210 NZ_CP089940.1 Protein Homology CDS 3448874 3449068 . + 0 ID=cds-WP_232426825.1;Parent=gene-LU631_RS18210;Dbxref=Genbank:WP_232426825.1;Name=WP_232426825.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00229.1;locus_tag=LU631_RS18210;product=PAS domain S-box protein;protein_id=WP_232426825.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3449034 3449587 . + . ID=gene-LU631_RS18215;Name=LU631_RS18215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18215;old_locus_tag=LU631_18215;pseudo=true NZ_CP089940.1 Protein Homology CDS 3449034 3449587 . + 0 ID=cds-LU631_RS18215;Parent=gene-LU631_RS18215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=LU631_RS18215;product=diguanylate cyclase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3449671 3450087 . + . ID=gene-LU631_RS18220;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS18220;old_locus_tag=LU631_18220;pseudo=true NZ_CP089940.1 Protein Homology CDS 3449671 3450087 . + 0 ID=cds-LU631_RS18220;Parent=gene-LU631_RS18220;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190995.1;locus_tag=LU631_RS18220;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3450261 3451406 . + . ID=gene-LU631_RS18225;Name=yegD;end_range=3451406,.;gbkey=Gene;gene=yegD;gene_biotype=pseudogene;locus_tag=LU631_RS18225;old_locus_tag=LU631_18225;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3450261 3451406 . + 0 ID=cds-LU631_RS18225;Parent=gene-LU631_RS18225;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524,GO:0016887;end_range=3451406,.;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416573.4;locus_tag=LU631_RS18225;partial=true;product=molecular chaperone;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3451593 3452819 . + . ID=gene-LU631_RS18230;Name=LU631_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18230;old_locus_tag=LU631_18230 NZ_CP089940.1 Protein Homology CDS 3451593 3452819 . + 0 ID=cds-WP_016189868.1;Parent=gene-LU631_RS18230;Dbxref=Genbank:WP_016189868.1;Name=WP_016189868.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013026394.1;locus_tag=LU631_RS18230;product=MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit;protein_id=WP_016189868.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3452819 3455944 . + . ID=gene-LU631_RS18235;Name=LU631_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18235;old_locus_tag=LU631_18235 NZ_CP089940.1 Protein Homology CDS 3452819 3455944 . + 0 ID=cds-WP_016189869.1;Parent=gene-LU631_RS18235;Dbxref=Genbank:WP_016189869.1;Name=WP_016189869.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202970.1;locus_tag=LU631_RS18235;product=MdtB/MuxB family multidrug efflux RND transporter permease subunit;protein_id=WP_016189869.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3455941 3459015 . + . ID=gene-LU631_RS18240;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=LU631_RS18240;old_locus_tag=LU631_18240 NZ_CP089940.1 Protein Homology CDS 3455941 3459015 . + 0 ID=cds-WP_016189870.1;Parent=gene-LU631_RS18240;Dbxref=Genbank:WP_016189870.1;Name=WP_016189870.1;Ontology_term=GO:0055085;gbkey=CDS;gene=mdtC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010670987.1;locus_tag=LU631_RS18240;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_016189870.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3459096 3460404 . + . ID=gene-LU631_RS18245;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=pseudogene;locus_tag=LU631_RS18245;old_locus_tag=LU631_18245;pseudo=true NZ_CP089940.1 Protein Homology CDS 3459096 3460404 . + 0 ID=cds-LU631_RS18245;Parent=gene-LU631_RS18245;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137816.1;locus_tag=LU631_RS18245;product=multidrug transporter subunit MdtD;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3460404 3461789 . + . ID=gene-LU631_RS18250;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=LU631_RS18250;old_locus_tag=LU631_18250 NZ_CP089940.1 Protein Homology CDS 3460404 3461789 . + 0 ID=cds-WP_016189873.1;Parent=gene-LU631_RS18250;Dbxref=Genbank:WP_016189873.1;Name=WP_016189873.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004164443.1;locus_tag=LU631_RS18250;product=two-component system sensor histidine kinase BaeS;protein_id=WP_016189873.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3461827 3462528 . + . ID=gene-LU631_RS18255;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=LU631_RS18255;old_locus_tag=LU631_18255 NZ_CP089940.1 Protein Homology CDS 3461827 3462528 . + 0 ID=cds-WP_016189874.1;Parent=gene-LU631_RS18255;Dbxref=Genbank:WP_016189874.1;Name=WP_016189874.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106531.1;locus_tag=LU631_RS18255;product=two-component system response regulator BaeR;protein_id=WP_016189874.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3462684 3464039 . + . ID=gene-LU631_RS18260;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=LU631_RS18260;old_locus_tag=LU631_18260 NZ_CP089940.1 Protein Homology CDS 3462684 3464039 . + 0 ID=cds-WP_016189875.1;Parent=gene-LU631_RS18260;Dbxref=Genbank:WP_016189875.1;Name=WP_016189875.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800262.1;locus_tag=LU631_RS18260;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_016189875.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3464263 3465165 . + . ID=gene-LU631_RS18265;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=LU631_RS18265;old_locus_tag=LU631_18265 NZ_CP089940.1 Protein Homology CDS 3464263 3465165 . + 0 ID=cds-WP_016189876.1;Parent=gene-LU631_RS18265;Dbxref=Genbank:WP_016189876.1;Name=WP_016189876.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667690.1;locus_tag=LU631_RS18265;product=lipid kinase YegS;protein_id=WP_016189876.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3465843 3466106 . + . ID=gene-LU631_RS18270;Name=LU631_RS18270;end_range=3466106,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18270;old_locus_tag=LU631_18270;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3465843 3466106 . + 0 ID=cds-LU631_RS18270;Parent=gene-LU631_RS18270;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3466106,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012472779.1;locus_tag=LU631_RS18270;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3466235 3466825 . + . ID=gene-LU631_RS18275;Name=LU631_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18275;old_locus_tag=LU631_18275 NZ_CP089940.1 Protein Homology CDS 3466235 3466825 . + 0 ID=cds-WP_046372259.1;Parent=gene-LU631_RS18275;Dbxref=Genbank:WP_046372259.1;Name=WP_046372259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003830791.1;locus_tag=LU631_RS18275;product=recombinase family protein;protein_id=WP_046372259.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3466876 3468186 . - . ID=gene-LU631_RS18280;Name=LU631_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18280;old_locus_tag=LU631_18280 NZ_CP089940.1 Protein Homology CDS 3466876 3468186 . - 0 ID=cds-WP_016189879.1;Parent=gene-LU631_RS18280;Dbxref=Genbank:WP_016189879.1;Name=WP_016189879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122344.1;locus_tag=LU631_RS18280;product=T3SS effector OspC family protein;protein_id=WP_016189879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3468779 3469312 . - . ID=gene-LU631_RS18285;Name=LU631_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18285;old_locus_tag=LU631_18285 NZ_CP089940.1 GeneMarkS-2+ CDS 3468779 3469312 . - 0 ID=cds-WP_016189880.1;Parent=gene-LU631_RS18285;Dbxref=Genbank:WP_016189880.1;Name=WP_016189880.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS18285;product=hypothetical protein;protein_id=WP_016189880.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3469319 3469567 . - . ID=gene-LU631_RS18290;Name=LU631_RS18290;end_range=3469567,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18290;old_locus_tag=LU631_18290;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3469319 3469567 . - 0 ID=cds-LU631_RS18290;Parent=gene-LU631_RS18290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3469567,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014611549.1;locus_tag=LU631_RS18290;partial=true;product=Hin recombinase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3469590 3470294 . - . ID=gene-LU631_RS18295;Name=LU631_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18295;old_locus_tag=LU631_18295 NZ_CP089940.1 Protein Homology CDS 3469590 3470294 . - 0 ID=cds-WP_016189882.1;Parent=gene-LU631_RS18295;Dbxref=Genbank:WP_016189882.1;Name=WP_016189882.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU631_RS18295;product=IS6 family transposase;protein_id=WP_016189882.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3470525 3470863 . + . ID=gene-LU631_RS18300;Name=LU631_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18300;old_locus_tag=LU631_18300 NZ_CP089940.1 Protein Homology CDS 3470525 3470863 . + 0 ID=cds-WP_040465293.1;Parent=gene-LU631_RS18300;Dbxref=Genbank:WP_040465293.1;Name=WP_040465293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078280.1;locus_tag=LU631_RS18300;product=DUF1493 family protein;protein_id=WP_040465293.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3470860 3471498 . - . ID=gene-LU631_RS18305;Name=LU631_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18305;old_locus_tag=LU631_18305 NZ_CP089940.1 Protein Homology CDS 3470860 3471498 . - 0 ID=cds-WP_016189885.1;Parent=gene-LU631_RS18305;Dbxref=Genbank:WP_016189885.1;Name=WP_016189885.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014427.2;locus_tag=LU631_RS18305;product=Ig-like domain-containing protein;protein_id=WP_016189885.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3471969 3472181 . - . ID=gene-LU631_RS18310;Name=LU631_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18310;old_locus_tag=LU631_18310 NZ_CP089940.1 GeneMarkS-2+ CDS 3471969 3472181 . - 0 ID=cds-WP_040465294.1;Parent=gene-LU631_RS18310;Dbxref=Genbank:WP_040465294.1;Name=WP_040465294.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS18310;product=hypothetical protein;protein_id=WP_040465294.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3472185 3472346 . - . ID=gene-LU631_RS18315;Name=LU631_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18315;old_locus_tag=LU631_18315 NZ_CP089940.1 Protein Homology CDS 3472185 3472346 . - 0 ID=cds-WP_232426805.1;Parent=gene-LU631_RS18315;Dbxref=Genbank:WP_232426805.1;Name=WP_232426805.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013720.2;locus_tag=LU631_RS18315;product=hypothetical protein;protein_id=WP_232426805.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3472388 3473194 . - . ID=gene-LU631_RS18320;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=LU631_RS18320;old_locus_tag=LU631_18320 NZ_CP089940.1 Protein Homology CDS 3472388 3473194 . - 0 ID=cds-WP_016189886.1;Parent=gene-LU631_RS18320;Dbxref=Genbank:WP_016189886.1;Name=WP_016189886.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310933.1;locus_tag=LU631_RS18320;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_016189886.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3473301 3473918 . - . ID=gene-LU631_RS18325;Name=LU631_RS18325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18325;old_locus_tag=LU631_18325;pseudo=true NZ_CP089940.1 Protein Homology CDS 3473301 3473918 . - 0 ID=cds-LU631_RS18325;Parent=gene-LU631_RS18325;Note=frameshifted%3B internal stop;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172949.1;locus_tag=LU631_RS18325;product=hydroxyethylthiazole kinase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3473915 3474121 . - . ID=gene-LU631_RS18330;Name=LU631_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18330;old_locus_tag=LU631_18330 NZ_CP089940.1 GeneMarkS-2+ CDS 3473915 3474121 . - 0 ID=cds-WP_152664180.1;Parent=gene-LU631_RS18330;Dbxref=Genbank:WP_152664180.1;Name=WP_152664180.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS18330;product=hypothetical protein;protein_id=WP_152664180.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3474140 3475249 . - . ID=gene-LU631_RS18335;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=LU631_RS18335;old_locus_tag=LU631_18335 NZ_CP089940.1 Protein Homology CDS 3474140 3475249 . - 0 ID=cds-WP_016189889.1;Parent=gene-LU631_RS18335;Dbxref=Genbank:WP_016189889.1;Name=WP_016189889.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202989.1;locus_tag=LU631_RS18335;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_016189889.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3475418 3477451 . + . ID=gene-LU631_RS18340;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=LU631_RS18340;old_locus_tag=LU631_18340 NZ_CP089940.1 Protein Homology CDS 3475418 3477451 . + 0 ID=cds-WP_016189890.1;Parent=gene-LU631_RS18340;Dbxref=Genbank:WP_016189890.1;Name=WP_016189890.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=LU631_RS18340;product=methionine--tRNA ligase;protein_id=WP_016189890.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3477601 3477996 . + . ID=gene-LU631_RS18345;Name=LU631_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18345;old_locus_tag=LU631_18345 NZ_CP089940.1 Protein Homology CDS 3477601 3477996 . + 0 ID=cds-WP_016189891.1;Parent=gene-LU631_RS18345;Dbxref=Genbank:WP_016189891.1;Name=WP_016189891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202991.1;locus_tag=LU631_RS18345;product=CidA/LrgA family protein;protein_id=WP_016189891.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3477989 3478681 . + . ID=gene-LU631_RS18350;Name=LU631_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18350;old_locus_tag=LU631_18350 NZ_CP089940.1 Protein Homology CDS 3477989 3478681 . + 0 ID=cds-WP_016189892.1;Parent=gene-LU631_RS18350;Dbxref=Genbank:WP_016189892.1;Name=WP_016189892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202992.1;locus_tag=LU631_RS18350;product=CidB/LrgB family autolysis modulator;protein_id=WP_016189892.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3478809 3479693 . + . ID=gene-LU631_RS18355;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=LU631_RS18355;old_locus_tag=LU631_18355 NZ_CP089940.1 Protein Homology CDS 3478809 3479693 . + 0 ID=cds-WP_016189893.1;Parent=gene-LU631_RS18355;Dbxref=Genbank:WP_016189893.1;Name=WP_016189893.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158401.1;locus_tag=LU631_RS18355;product=cytidine deaminase;protein_id=WP_016189893.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3479813 3481510 . + . ID=gene-LU631_RS18360;Name=LU631_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18360;old_locus_tag=LU631_18360 NZ_CP089940.1 Protein Homology CDS 3479813 3481510 . + 0 ID=cds-WP_016189894.1;Parent=gene-LU631_RS18360;Dbxref=Genbank:WP_016189894.1;Name=WP_016189894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227114.1;locus_tag=LU631_RS18360;product=NAD-dependent malic enzyme;protein_id=WP_016189894.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3481737 3482582 . + . ID=gene-LU631_RS18365;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=LU631_RS18365;old_locus_tag=LU631_18365 NZ_CP089940.1 Protein Homology CDS 3481737 3482582 . + 0 ID=cds-WP_016189895.1;Parent=gene-LU631_RS18365;Dbxref=Genbank:WP_016189895.1;Name=WP_016189895.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014609091.1;locus_tag=LU631_RS18365;product=outer membrane permeability protein SanA;protein_id=WP_016189895.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3483317 3483754 . - . ID=gene-LU631_RS18370;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS18370;old_locus_tag=LU631_18370 NZ_CP089940.1 Protein Homology CDS 3483317 3483754 . - 0 ID=cds-WP_046371950.1;Parent=gene-LU631_RS18370;Dbxref=Genbank:WP_046371950.1;Name=WP_046371950.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS18370;product=IS200/IS605 family transposase;protein_id=WP_046371950.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3483922 3484932 . - . ID=gene-LU631_RS18375;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=LU631_RS18375;old_locus_tag=LU631_18375 NZ_CP089940.1 Protein Homology CDS 3483922 3484932 . - 0 ID=cds-WP_016189897.1;Parent=gene-LU631_RS18375;Dbxref=Genbank:WP_016189897.1;Name=WP_016189897.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461133.1;locus_tag=LU631_RS18375;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_016189897.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3484952 3486472 . - . ID=gene-LU631_RS18380;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=LU631_RS18380;old_locus_tag=LU631_18380 NZ_CP089940.1 Protein Homology CDS 3484952 3486472 . - 0 ID=cds-WP_016189898.1;Parent=gene-LU631_RS18380;Dbxref=Genbank:WP_016189898.1;Name=WP_016189898.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799414.1;locus_tag=LU631_RS18380;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_016189898.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3486563 3487558 . - . ID=gene-LU631_RS18385;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=LU631_RS18385;old_locus_tag=LU631_18385 NZ_CP089940.1 Protein Homology CDS 3486563 3487558 . - 0 ID=cds-WP_016189899.1;Parent=gene-LU631_RS18385;Dbxref=Genbank:WP_016189899.1;Name=WP_016189899.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170245.1;locus_tag=LU631_RS18385;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_016189899.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3487896 3488894 . - . ID=gene-LU631_RS18390;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=LU631_RS18390;old_locus_tag=LU631_18390 NZ_CP089940.1 Protein Homology CDS 3487896 3488894 . - 0 ID=cds-WP_016189900.1;Parent=gene-LU631_RS18390;Dbxref=Genbank:WP_016189900.1;Name=WP_016189900.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203001.1;locus_tag=LU631_RS18390;product=HTH-type transcriptional regulator GalS;protein_id=WP_016189900.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3489050 3490204 . - . ID=gene-LU631_RS18395;Name=LU631_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18395;old_locus_tag=LU631_18395 NZ_CP089940.1 Protein Homology CDS 3489050 3490204 . - 0 ID=cds-WP_016189901.1;Parent=gene-LU631_RS18395;Dbxref=Genbank:WP_016189901.1;Name=WP_016189901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203002.1;locus_tag=LU631_RS18395;product=DUF418 family protein;protein_id=WP_016189901.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3490213 3490878 . - . ID=gene-LU631_RS18400;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=LU631_RS18400;old_locus_tag=LU631_18400 NZ_CP089940.1 Protein Homology CDS 3490213 3490878 . - 0 ID=cds-WP_016189902.1;Parent=gene-LU631_RS18400;Dbxref=Genbank:WP_016189902.1;Name=WP_016189902.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544649.1;locus_tag=LU631_RS18400;product=GTP cyclohydrolase I FolE;protein_id=WP_016189902.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3491295 3491893 . + . ID=gene-LU631_RS18405;Name=LU631_RS18405;end_range=3491893,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18405;old_locus_tag=LU631_18405;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3491295 3491893 . + 0 ID=cds-LU631_RS18405;Parent=gene-LU631_RS18405;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=3491893,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU631_RS18405;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3491859 3492359 . - . ID=gene-LU631_RS18410;Name=LU631_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18410;old_locus_tag=LU631_18410 NZ_CP089940.1 Protein Homology CDS 3491859 3492359 . - 0 ID=cds-WP_152664181.1;Parent=gene-LU631_RS18410;Dbxref=Genbank:WP_152664181.1;Name=WP_152664181.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: protein motif:HMM:NF012372.2;locus_tag=LU631_RS18410;product=DNA cytosine methyltransferase;protein_id=WP_152664181.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3492740 3493749 . + . ID=gene-LU631_RS18415;Name=LU631_RS18415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18415;old_locus_tag=LU631_18415;pseudo=true NZ_CP089940.1 Protein Homology CDS 3492740 3493749 . + 0 ID=cds-LU631_RS18415;Parent=gene-LU631_RS18415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667639.1;locus_tag=LU631_RS18415;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3493929 3494969 . + . ID=gene-LU631_RS18420;Name=LU631_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18420;old_locus_tag=LU631_18420 NZ_CP089940.1 Protein Homology CDS 3493929 3494969 . + 0 ID=cds-WP_046371791.1-18;Parent=gene-LU631_RS18420;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS18420;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3495370 3495699 . - . ID=gene-LU631_RS18425;Name=LU631_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18425;old_locus_tag=LU631_18425 NZ_CP089940.1 Protein Homology CDS 3495370 3495699 . - 0 ID=cds-WP_016189907.1;Parent=gene-LU631_RS18425;Dbxref=Genbank:WP_016189907.1;Name=WP_016189907.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: protein motif:HMM:NF018262.2;locus_tag=LU631_RS18425;product=antiterminator Q family protein;protein_id=WP_016189907.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3495762 3496459 . + . ID=gene-LU631_RS18430;Name=LU631_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18430;old_locus_tag=LU631_18430 NZ_CP089940.1 Protein Homology CDS 3495762 3496011 . + 0 ID=cds-WP_233481931.1;Parent=gene-LU631_RS18430;Dbxref=Genbank:WP_233481931.1;Name=WP_233481931.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS18430;product=IS1 family transposase;protein_id=WP_233481931.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 3496011 3496459 . + 2 ID=cds-WP_233481931.1;Parent=gene-LU631_RS18430;Dbxref=Genbank:WP_233481931.1;Name=WP_233481931.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS18430;product=IS1 family transposase;protein_id=WP_233481931.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3497640 3499076 . - . ID=gene-LU631_RS18435;Name=LU631_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18435;old_locus_tag=LU631_18435 NZ_CP089940.1 Protein Homology CDS 3497640 3499076 . - 0 ID=cds-WP_082103834.1;Parent=gene-LU631_RS18435;Dbxref=Genbank:WP_082103834.1;Name=WP_082103834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010284433.1;locus_tag=LU631_RS18435;product=glycoside hydrolase family 1 protein;protein_id=WP_082103834.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3499267 3500541 . - . ID=gene-LU631_RS18440;Name=LU631_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18440;old_locus_tag=LU631_18440 NZ_CP089940.1 Protein Homology CDS 3499267 3500541 . - 0 ID=cds-WP_232426806.1;Parent=gene-LU631_RS18440;Dbxref=Genbank:WP_232426806.1;Name=WP_232426806.1;Ontology_term=GO:0009234,GO:0008909,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isochorismate synthase activity|0008909||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965419.1;locus_tag=LU631_RS18440;product=isochorismate synthase;protein_id=WP_232426806.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3500489 3501931 . - . ID=gene-LU631_RS18445;Name=LU631_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18445;old_locus_tag=LU631_18445 NZ_CP089940.1 Protein Homology CDS 3500489 3501931 . - 0 ID=cds-WP_232426826.1;Parent=gene-LU631_RS18445;Dbxref=Genbank:WP_232426826.1;Name=WP_232426826.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202897.1;locus_tag=LU631_RS18445;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_232426826.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3502397 3502717 . - . ID=gene-LU631_RS18450;Name=LU631_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18450;old_locus_tag=LU631_18450 NZ_CP089940.1 Protein Homology CDS 3502397 3502717 . - 0 ID=cds-WP_016189911.1;Parent=gene-LU631_RS18450;Dbxref=Genbank:WP_016189911.1;Name=WP_016189911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013026330.1;locus_tag=LU631_RS18450;product=DUF496 family protein;protein_id=WP_016189911.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3503154 3503294 . + . ID=gene-LU631_RS26170;Name=LU631_RS26170;end_range=3503294,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS26170;partial=true;pseudo=true;start_range=.,3503154 NZ_CP089940.1 Protein Homology CDS 3503154 3503294 . + 0 ID=cds-LU631_RS26170;Parent=gene-LU631_RS26170;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3503294,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105637.1;locus_tag=LU631_RS26170;partial=true;product=pyridine nucleotide-disulfide oxidoreductase;pseudo=true;start_range=.,3503154;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3503284 3503472 . - . ID=gene-LU631_RS18455;Name=LU631_RS18455;end_range=3503472,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18455;old_locus_tag=LU631_18455;partial=true;pseudo=true;start_range=.,3503284 NZ_CP089940.1 Protein Homology CDS 3503284 3503472 . - 0 ID=cds-LU631_RS18455;Parent=gene-LU631_RS18455;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3503472,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006119812.1;locus_tag=LU631_RS18455;partial=true;product=serine-type D-Ala-D-Ala carboxypeptidase;pseudo=true;start_range=.,3503284;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3503658 3504839 . + . ID=gene-LU631_RS18460;Name=LU631_RS18460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18460;old_locus_tag=LU631_18460;pseudo=true NZ_CP089940.1 Protein Homology CDS 3503658 3504839 . + 0 ID=cds-LU631_RS18460;Parent=gene-LU631_RS18460;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025244073.1;locus_tag=LU631_RS18460;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3504859 3504960 . + . ID=gene-LU631_RS18465;Name=LU631_RS18465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18465;old_locus_tag=LU631_18465;partial=true;pseudo=true;start_range=.,3504859 NZ_CP089940.1 Protein Homology CDS 3504859 3504960 . + 0 ID=cds-LU631_RS18465;Parent=gene-LU631_RS18465;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001067783.1;locus_tag=LU631_RS18465;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,3504859;transl_table=11 NZ_CP089940.1 RefSeq gene 3505033 3506355 . - . ID=gene-LU631_RS18470;Name=LU631_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18470;old_locus_tag=LU631_18470 NZ_CP089940.1 GeneMarkS-2+ CDS 3505033 3506355 . - 0 ID=cds-WP_016189917.1;Parent=gene-LU631_RS18470;Dbxref=Genbank:WP_016189917.1;Name=WP_016189917.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS18470;product=hypothetical protein;protein_id=WP_016189917.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3506586 3506836 . - . ID=gene-LU631_RS18475;Name=LU631_RS18475;end_range=3506836,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18475;old_locus_tag=LU631_18475;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3506586 3506836 . - 0 ID=cds-LU631_RS18475;Parent=gene-LU631_RS18475;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3506836,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=LU631_RS18475;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3507197 3507563 . + . ID=gene-LU631_RS18480;Name=LU631_RS18480;end_range=3507563,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18480;old_locus_tag=LU631_18480;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3507197 3507563 . + 0 ID=cds-LU631_RS18480;Parent=gene-LU631_RS18480;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3507563,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=LU631_RS18480;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3508180 3509121 . + . ID=gene-LU631_RS18485;Name=LU631_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18485;old_locus_tag=LU631_18485 NZ_CP089940.1 Protein Homology CDS 3508180 3509121 . + 0 ID=cds-WP_016189919.1;Parent=gene-LU631_RS18485;Dbxref=Genbank:WP_016189919.1;Name=WP_016189919.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017231.2;locus_tag=LU631_RS18485;product=XopAH/AvrB family type III secretion system effector;protein_id=WP_016189919.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3509191 3509335 . - . ID=gene-LU631_RS18490;Name=LU631_RS18490;end_range=3509335,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18490;old_locus_tag=LU631_18490;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3509191 3509335 . - 0 ID=cds-LU631_RS18490;Parent=gene-LU631_RS18490;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3509335,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343765.1;locus_tag=LU631_RS18490;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3509575 3510060 . - . ID=gene-LU631_RS18495;Name=LU631_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18495;old_locus_tag=LU631_18495 NZ_CP089940.1 Protein Homology CDS 3509575 3510060 . - 0 ID=cds-WP_016189920.1;Parent=gene-LU631_RS18495;Dbxref=Genbank:WP_016189920.1;Name=WP_016189920.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025677.2;locus_tag=LU631_RS18495;product=IS91 family transposase;protein_id=WP_016189920.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3509970 3510170 . - . ID=gene-LU631_RS18500;Name=LU631_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18500;old_locus_tag=LU631_18500 NZ_CP089940.1 GeneMarkS-2+ CDS 3509970 3510170 . - 0 ID=cds-WP_233480366.1;Parent=gene-LU631_RS18500;Dbxref=Genbank:WP_233480366.1;Name=WP_233480366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS18500;product=hypothetical protein;protein_id=WP_233480366.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3510411 3511177 . - . ID=gene-LU631_RS18505;Name=LU631_RS18505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18505;old_locus_tag=LU631_18505;pseudo=true NZ_CP089940.1 Protein Homology CDS 3510411 3511177 . - 0 ID=cds-LU631_RS18505;Parent=gene-LU631_RS18505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=LU631_RS18505;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3511311 3511436 . - . ID=gene-LU631_RS18510;Name=LU631_RS18510;end_range=3511436,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18510;old_locus_tag=LU631_18510;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3511311 3511436 . - 0 ID=cds-LU631_RS18510;Parent=gene-LU631_RS18510;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677;end_range=3511436,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152402.1;locus_tag=LU631_RS18510;partial=true;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3511549 3511761 . + . ID=gene-LU631_RS18515;Name=LU631_RS18515;end_range=3511761,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18515;old_locus_tag=LU631_18515;partial=true;pseudo=true;start_range=.,3511549 NZ_CP089940.1 Protein Homology CDS 3511549 3511761 . + 0 ID=cds-LU631_RS18515;Parent=gene-LU631_RS18515;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3511761,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437528.1;locus_tag=LU631_RS18515;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3511549;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3511738 3511992 . + . ID=gene-LU631_RS18520;Name=LU631_RS18520;end_range=3511992,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18520;old_locus_tag=LU631_18520;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3511738 3511992 . + 0 ID=cds-LU631_RS18520;Parent=gene-LU631_RS18520;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3511992,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022869.2;locus_tag=LU631_RS18520;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3512058 3512755 . + . ID=gene-LU631_RS18525;Name=LU631_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18525;old_locus_tag=LU631_18525 NZ_CP089940.1 Protein Homology CDS 3512058 3512307 . + 0 ID=cds-WP_233481926.1-2;Parent=gene-LU631_RS18525;Dbxref=Genbank:WP_233481926.1;Name=WP_233481926.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS18525;product=IS1 family transposase;protein_id=WP_233481926.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 3512307 3512755 . + 2 ID=cds-WP_233481926.1-2;Parent=gene-LU631_RS18525;Dbxref=Genbank:WP_233481926.1;Name=WP_233481926.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS18525;product=IS1 family transposase;protein_id=WP_233481926.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3513002 3513828 . - . ID=gene-LU631_RS18530;Name=LU631_RS18530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18530;old_locus_tag=LU631_18530;pseudo=true NZ_CP089940.1 Protein Homology CDS 3513002 3513828 . - 0 ID=cds-LU631_RS18530;Parent=gene-LU631_RS18530;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS18530;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3513892 3514266 . - . ID=gene-LU631_RS18535;Name=LU631_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18535;old_locus_tag=LU631_18535 NZ_CP089940.1 GeneMarkS-2+ CDS 3513892 3514266 . - 0 ID=cds-WP_016189927.1;Parent=gene-LU631_RS18535;Dbxref=Genbank:WP_016189927.1;Name=WP_016189927.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS18535;product=hypothetical protein;protein_id=WP_016189927.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3514265 3514651 . + . ID=gene-LU631_RS18540;Name=LU631_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18540;old_locus_tag=LU631_18540 NZ_CP089940.1 Protein Homology CDS 3514265 3514651 . + 0 ID=cds-WP_016189928.1;Parent=gene-LU631_RS18540;Dbxref=Genbank:WP_016189928.1;Name=WP_016189928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544831.1;locus_tag=LU631_RS18540;product=ArsC family reductase;protein_id=WP_016189928.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3514654 3515781 . + . ID=gene-LU631_RS18545;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=LU631_RS18545;old_locus_tag=LU631_18545 NZ_CP089940.1 Protein Homology CDS 3514654 3515781 . + 0 ID=cds-WP_016189929.1;Parent=gene-LU631_RS18545;Dbxref=Genbank:WP_016189929.1;Name=WP_016189929.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461418.1;locus_tag=LU631_RS18545;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_016189929.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3515790 3515978 . + . ID=gene-LU631_RS18550;Name=LU631_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18550;old_locus_tag=LU631_18550 NZ_CP089940.1 Protein Homology CDS 3515790 3515978 . + 0 ID=cds-WP_016189930.1;Parent=gene-LU631_RS18550;Dbxref=Genbank:WP_016189930.1;Name=WP_016189930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014605299.1;locus_tag=LU631_RS18550;product=YpfN family protein;protein_id=WP_016189930.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3516304 3518343 . - . ID=gene-LU631_RS18555;Name=LU631_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18555;old_locus_tag=LU631_18555 NZ_CP089940.1 Protein Homology CDS 3516304 3518343 . - 0 ID=cds-WP_233481932.1;Parent=gene-LU631_RS18555;Dbxref=Genbank:WP_233481932.1;Name=WP_233481932.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544849.1;locus_tag=LU631_RS18555;product=GNAT family N-acetyltransferase;protein_id=WP_233481932.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3518319 3518957 . - . ID=gene-LU631_RS18560;Name=LU631_RS18560;end_range=3518957,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18560;old_locus_tag=LU631_18560;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3518319 3518957 . - 0 ID=cds-LU631_RS18560;Parent=gene-LU631_RS18560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3518957,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008108361.1;locus_tag=LU631_RS18560;partial=true;product=zinc metallopeptidase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3519003 3519716 . - . ID=gene-LU631_RS18565;Name=LU631_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18565;old_locus_tag=LU631_18565 NZ_CP089940.1 Protein Homology CDS 3519003 3519716 . - 0 ID=cds-WP_016189933.1;Parent=gene-LU631_RS18565;Dbxref=Genbank:WP_016189933.1;Name=WP_016189933.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=LU631_RS18565;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_016189933.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3520162 3521196 . - . ID=gene-LU631_RS18570;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=LU631_RS18570;old_locus_tag=LU631_18570 NZ_CP089940.1 Protein Homology CDS 3520162 3521196 . - 0 ID=cds-WP_016189934.1;Parent=gene-LU631_RS18570;Dbxref=Genbank:WP_016189934.1;Name=WP_016189934.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168244.1;locus_tag=LU631_RS18570;product=outer membrane protein assembly factor BamC;protein_id=WP_016189934.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3521212 3522090 . - . ID=gene-LU631_RS18575;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=LU631_RS18575;old_locus_tag=LU631_18575 NZ_CP089940.1 Protein Homology CDS 3521212 3522090 . - 0 ID=cds-WP_016189935.1;Parent=gene-LU631_RS18575;Dbxref=Genbank:WP_016189935.1;Name=WP_016189935.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=LU631_RS18575;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_016189935.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3522248 3522841 . + . ID=gene-LU631_RS18580;Name=LU631_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18580;old_locus_tag=LU631_18580 NZ_CP089940.1 Protein Homology CDS 3522248 3522841 . + 0 ID=cds-WP_016189936.1;Parent=gene-LU631_RS18580;Dbxref=Genbank:WP_016189936.1;Name=WP_016189936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803236.1;locus_tag=LU631_RS18580;product=glycine cleavage system transcriptional repressor;protein_id=WP_016189936.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3522819 3523286 . + . ID=gene-LU631_RS18585;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=LU631_RS18585;old_locus_tag=LU631_18585 NZ_CP089940.1 Protein Homology CDS 3522819 3523286 . + 0 ID=cds-WP_016189937.1;Parent=gene-LU631_RS18585;Dbxref=Genbank:WP_016189937.1;Name=WP_016189937.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803235.1;locus_tag=LU631_RS18585;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_016189937.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3523492 3524189 . + . ID=gene-LU631_RS18590;Name=LU631_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18590;old_locus_tag=LU631_18590 NZ_CP089940.1 Protein Homology CDS 3523492 3523741 . + 0 ID=cds-WP_233481933.1;Parent=gene-LU631_RS18590;Dbxref=Genbank:WP_233481933.1;Name=WP_233481933.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS18590;product=IS1 family transposase;protein_id=WP_233481933.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 3523741 3524189 . + 2 ID=cds-WP_233481933.1;Parent=gene-LU631_RS18590;Dbxref=Genbank:WP_233481933.1;Name=WP_233481933.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS18590;product=IS1 family transposase;protein_id=WP_233481933.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3524951 3526408 . + . ID=gene-LU631_RS18595;Name=LU631_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18595;old_locus_tag=LU631_18595 NZ_CP089940.1 Protein Homology CDS 3524951 3526408 . + 0 ID=cds-WP_040465399.1;Parent=gene-LU631_RS18595;Dbxref=Genbank:WP_040465399.1;Name=WP_040465399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440808.1;locus_tag=LU631_RS18595;product=M48 family metallopeptidase;protein_id=WP_040465399.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3526422 3526775 . + . ID=gene-LU631_RS18600;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=LU631_RS18600;old_locus_tag=LU631_18600 NZ_CP089940.1 Protein Homology CDS 3526422 3526775 . + 0 ID=cds-WP_016189939.1;Parent=gene-LU631_RS18600;Dbxref=Genbank:WP_016189939.1;Name=WP_016189939.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006316889.1;locus_tag=LU631_RS18600;product=arsenate reductase (glutaredoxin);protein_id=WP_016189939.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3526803 3527510 . - . ID=gene-LU631_RS18605;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=LU631_RS18605;old_locus_tag=LU631_18605 NZ_CP089940.1 Protein Homology CDS 3526803 3527510 . - 0 ID=cds-WP_040465400.1;Parent=gene-LU631_RS18605;Dbxref=Genbank:WP_040465400.1;Name=WP_040465400.1;gbkey=CDS;gene=hda;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228401.1;locus_tag=LU631_RS18605;product=DnaA inactivator Hda;protein_id=WP_040465400.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3528355 3529632 . - . ID=gene-LU631_RS18610;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=LU631_RS18610;old_locus_tag=LU631_18610 NZ_CP089940.1 Protein Homology CDS 3528355 3529632 . - 0 ID=cds-WP_016189941.1;Parent=gene-LU631_RS18610;Dbxref=Genbank:WP_016189941.1;Name=WP_016189941.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010260058.1;locus_tag=LU631_RS18610;product=uracil permease;protein_id=WP_016189941.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3529848 3530474 . - . ID=gene-LU631_RS18615;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=LU631_RS18615;old_locus_tag=LU631_18615 NZ_CP089940.1 Protein Homology CDS 3529848 3530474 . - 0 ID=cds-WP_016189942.1;Parent=gene-LU631_RS18615;Dbxref=Genbank:WP_016189942.1;Name=WP_016189942.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=LU631_RS18615;product=uracil phosphoribosyltransferase;protein_id=WP_016189942.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3530717 3531757 . + . ID=gene-LU631_RS18620;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=LU631_RS18620;old_locus_tag=LU631_18620 NZ_CP089940.1 Protein Homology CDS 3530717 3531757 . + 0 ID=cds-WP_016189943.1;Parent=gene-LU631_RS18620;Dbxref=Genbank:WP_016189943.1;Name=WP_016189943.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189943.1;locus_tag=LU631_RS18620;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_016189943.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3531754 3532392 . + . ID=gene-LU631_RS18625;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=LU631_RS18625;old_locus_tag=LU631_18625 NZ_CP089940.1 Protein Homology CDS 3531754 3532392 . + 0 ID=cds-WP_016189944.1;Parent=gene-LU631_RS18625;Dbxref=Genbank:WP_016189944.1;Name=WP_016189944.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848743.1;locus_tag=LU631_RS18625;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_016189944.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3532452 3532601 . - . ID=gene-LU631_RS18630;Name=LU631_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18630;old_locus_tag=LU631_18630 NZ_CP089940.1 GeneMarkS-2+ CDS 3532452 3532601 . - 0 ID=cds-WP_161796970.1;Parent=gene-LU631_RS18630;Dbxref=Genbank:WP_161796970.1;Name=WP_161796970.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS18630;product=hypothetical protein;protein_id=WP_161796970.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3532758 3534818 . + . ID=gene-LU631_RS18635;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=LU631_RS18635;old_locus_tag=LU631_18635 NZ_CP089940.1 Protein Homology CDS 3532758 3534818 . + 0 ID=cds-WP_016189945.1;Parent=gene-LU631_RS18635;Dbxref=Genbank:WP_016189945.1;Name=WP_016189945.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311390.1;locus_tag=LU631_RS18635;product=polyphosphate kinase 1;protein_id=WP_016189945.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3534825 3536357 . + . ID=gene-LU631_RS18640;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=LU631_RS18640;old_locus_tag=LU631_18640 NZ_CP089940.1 Protein Homology CDS 3534825 3536357 . + 0 ID=cds-WP_016189946.1;Parent=gene-LU631_RS18640;Dbxref=Genbank:WP_016189946.1;Name=WP_016189946.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014541889.1;locus_tag=LU631_RS18640;product=exopolyphosphatase;protein_id=WP_016189946.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3536354 3536959 . + . ID=gene-LU631_RS18645;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=LU631_RS18645;old_locus_tag=LU631_18645 NZ_CP089940.1 Protein Homology CDS 3536354 3536959 . + 0 ID=cds-WP_016189947.1;Parent=gene-LU631_RS18645;Dbxref=Genbank:WP_016189947.1;Name=WP_016189947.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203377.1;locus_tag=LU631_RS18645;product=tellurite resistance methyltransferase TehB;protein_id=WP_016189947.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3536909 3537163 . - . ID=gene-LU631_RS18650;Name=LU631_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18650;old_locus_tag=LU631_18650 NZ_CP089940.1 GeneMarkS-2+ CDS 3536909 3537163 . - 0 ID=cds-WP_016189948.1;Parent=gene-LU631_RS18650;Dbxref=Genbank:WP_016189948.1;Name=WP_016189948.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS18650;product=hypothetical protein;protein_id=WP_016189948.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3537292 3537459 . + . ID=gene-LU631_RS18655;Name=LU631_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18655;old_locus_tag=LU631_18655 NZ_CP089940.1 Protein Homology CDS 3537292 3537459 . + 0 ID=cds-WP_016189949.1;Parent=gene-LU631_RS18655;Dbxref=Genbank:WP_016189949.1;Name=WP_016189949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203380.1;locus_tag=LU631_RS18655;product=YfgG family protein;protein_id=WP_016189949.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3537663 3537917 . - . ID=gene-LU631_RS18660;Name=LU631_RS18660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18660;old_locus_tag=LU631_18660;partial=true;pseudo=true;start_range=.,3537663 NZ_CP089940.1 Protein Homology CDS 3537663 3537917 . - 0 ID=cds-LU631_RS18660;Parent=gene-LU631_RS18660;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077814.1;locus_tag=LU631_RS18660;partial=true;product=phage major capsid protein;pseudo=true;start_range=.,3537663;transl_table=11 NZ_CP089940.1 RefSeq gene 3538151 3538480 . - . ID=gene-LU631_RS18665;Name=LU631_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18665;old_locus_tag=LU631_18665 NZ_CP089940.1 Protein Homology CDS 3538151 3538480 . - 0 ID=cds-WP_016189951.1;Parent=gene-LU631_RS18665;Dbxref=Genbank:WP_016189951.1;Name=WP_016189951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013512042.1;locus_tag=LU631_RS18665;product=DUF1493 family protein;protein_id=WP_016189951.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3538554 3539251 . + . ID=gene-LU631_RS18670;Name=LU631_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18670;old_locus_tag=LU631_18670 NZ_CP089940.1 Protein Homology CDS 3538554 3538803 . + 0 ID=cds-WP_233481934.1;Parent=gene-LU631_RS18670;Dbxref=Genbank:WP_233481934.1;Name=WP_233481934.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS18670;product=IS1 family transposase;protein_id=WP_233481934.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 3538803 3539251 . + 2 ID=cds-WP_233481934.1;Parent=gene-LU631_RS18670;Dbxref=Genbank:WP_233481934.1;Name=WP_233481934.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS18670;product=IS1 family transposase;protein_id=WP_233481934.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3539622 3540742 . + . ID=gene-LU631_RS18675;Name=LU631_RS18675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18675;old_locus_tag=LU631_18675;pseudo=true NZ_CP089940.1 Protein Homology CDS 3539622 3540742 . + 0 ID=cds-LU631_RS18675;Parent=gene-LU631_RS18675;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU631_RS18675;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3540845 3541156 . - . ID=gene-LU631_RS18680;Name=LU631_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18680;old_locus_tag=LU631_18680 NZ_CP089940.1 Protein Homology CDS 3540845 3541156 . - 0 ID=cds-WP_016189957.1;Parent=gene-LU631_RS18680;Dbxref=Genbank:WP_016189957.1;Name=WP_016189957.1;Ontology_term=GO:0019076,GO:0019835;gbkey=CDS;go_process=viral release from host cell|0019076||IEA,cytolysis|0019835||IEA;inference=COORDINATES: protein motif:HMM:NF015218.2;locus_tag=LU631_RS18680;product=lysis system i-spanin subunit Rz;protein_id=WP_016189957.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3541485 3542087 . + . ID=gene-LU631_RS18685;Name=LU631_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18685;old_locus_tag=LU631_18685 NZ_CP089940.1 Protein Homology CDS 3541485 3542087 . + 0 ID=cds-WP_016189958.1;Parent=gene-LU631_RS18685;Dbxref=Genbank:WP_016189958.1;Name=WP_016189958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192989.1;locus_tag=LU631_RS18685;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_016189958.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3542241 3543017 . + . ID=gene-LU631_RS18690;Name=LU631_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18690;old_locus_tag=LU631_18690 NZ_CP089940.1 Protein Homology CDS 3542241 3543017 . + 0 ID=cds-WP_016189959.1;Parent=gene-LU631_RS18690;Dbxref=Genbank:WP_016189959.1;Name=WP_016189959.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: protein motif:HMM:NF013786.2;locus_tag=LU631_RS18690;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_016189959.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3543388 3544031 . - . ID=gene-LU631_RS18695;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=pseudogene;locus_tag=LU631_RS18695;old_locus_tag=LU631_18695;pseudo=true NZ_CP089940.1 Protein Homology CDS 3543388 3544031 . - 0 ID=cds-LU631_RS18695;Parent=gene-LU631_RS18695;Note=frameshifted;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203043.1;locus_tag=LU631_RS18695;product=DNA oxidative demethylase AlkB;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3544053 3545093 . - . ID=gene-LU631_RS18700;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=LU631_RS18700;old_locus_tag=LU631_18700 NZ_CP089940.1 Protein Homology CDS 3544053 3545093 . - 0 ID=cds-WP_016189962.1;Parent=gene-LU631_RS18700;Dbxref=Genbank:WP_016189962.1;Name=WP_016189962.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509844.1;locus_tag=LU631_RS18700;product=FAD:protein FMN transferase ApbE;protein_id=WP_016189962.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3545249 3545377 . + . ID=gene-LU631_RS26175;Name=LU631_RS26175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26175 NZ_CP089940.1 GeneMarkS-2+ CDS 3545249 3545377 . + 0 ID=cds-WP_016189963.1;Parent=gene-LU631_RS26175;Dbxref=Genbank:WP_016189963.1;Name=WP_016189963.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS26175;product=hypothetical protein;protein_id=WP_016189963.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3545459 3546565 . - . ID=gene-LU631_RS18705;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=LU631_RS18705;old_locus_tag=LU631_18705 NZ_CP089940.1 Protein Homology CDS 3545459 3546565 . - 0 ID=cds-WP_016189964.1;Parent=gene-LU631_RS18705;Dbxref=Genbank:WP_016189964.1;Name=WP_016189964.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000865552.1;locus_tag=LU631_RS18705;product=porin OmpC;protein_id=WP_016189964.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3547938 3550592 . + . ID=gene-LU631_RS18710;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=LU631_RS18710;old_locus_tag=LU631_18710 NZ_CP089940.1 Protein Homology CDS 3547938 3550592 . + 0 ID=cds-WP_016189966.1;Parent=gene-LU631_RS18710;Dbxref=Genbank:WP_016189966.1;Name=WP_016189966.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014538751.1;locus_tag=LU631_RS18710;product=phosphotransferase RcsD;protein_id=WP_016189966.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3550589 3551239 . + . ID=gene-LU631_RS18715;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=LU631_RS18715;old_locus_tag=LU631_18715 NZ_CP089940.1 Protein Homology CDS 3550589 3551239 . + 0 ID=cds-WP_016189967.1;Parent=gene-LU631_RS18715;Dbxref=Genbank:WP_016189967.1;Name=WP_016189967.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158545.1;locus_tag=LU631_RS18715;product=response regulator transcription factor RcsB;protein_id=WP_016189967.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3551635 3554490 . - . ID=gene-LU631_RS18720;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=LU631_RS18720;old_locus_tag=LU631_18720 NZ_CP089940.1 Protein Homology CDS 3551635 3554490 . - 0 ID=cds-WP_016189968.1;Parent=gene-LU631_RS18720;Dbxref=Genbank:WP_016189968.1;Name=WP_016189968.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854206.1;locus_tag=LU631_RS18720;product=two-component system sensor histidine kinase RcsC;protein_id=WP_016189968.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3554690 3557329 . - . ID=gene-LU631_RS18725;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=LU631_RS18725;old_locus_tag=LU631_18725 NZ_CP089940.1 Protein Homology CDS 3554690 3557329 . - 0 ID=cds-WP_016189969.1;Parent=gene-LU631_RS18725;Dbxref=Genbank:WP_016189969.1;Name=WP_016189969.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120003.1;locus_tag=LU631_RS18725;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_016189969.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3557522 3558250 . + . ID=gene-LU631_RS18730;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=LU631_RS18730;old_locus_tag=LU631_18730 NZ_CP089940.1 Protein Homology CDS 3557522 3558250 . + 0 ID=cds-WP_016189970.1;Parent=gene-LU631_RS18730;Dbxref=Genbank:WP_016189970.1;Name=WP_016189970.1;Ontology_term=GO:0006744,GO:0008689;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinone-9 3-O-methyltransferase activity|0008689||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203057.1;locus_tag=LU631_RS18730;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_016189970.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3558755 3561040 . + . ID=gene-LU631_RS18735;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=LU631_RS18735;old_locus_tag=LU631_18735 NZ_CP089940.1 Protein Homology CDS 3558755 3561040 . + 0 ID=cds-WP_016189971.1;Parent=gene-LU631_RS18735;Dbxref=Genbank:WP_016189971.1;Name=WP_016189971.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=LU631_RS18735;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_016189971.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3561104 3562234 . + . ID=gene-LU631_RS18740;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=LU631_RS18740;old_locus_tag=LU631_18740 NZ_CP089940.1 Protein Homology CDS 3561104 3562234 . + 0 ID=cds-WP_016189972.1;Parent=gene-LU631_RS18740;Dbxref=Genbank:WP_016189972.1;Name=WP_016189972.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=LU631_RS18740;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_016189972.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3562236 3562496 . + . ID=gene-LU631_RS18745;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=LU631_RS18745;old_locus_tag=LU631_18745 NZ_CP089940.1 Protein Homology CDS 3562236 3562496 . + 0 ID=cds-WP_016189973.1;Parent=gene-LU631_RS18745;Dbxref=Genbank:WP_016189973.1;Name=WP_016189973.1;Ontology_term=GO:0051537;gbkey=CDS;gene=yfaE;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440963.1;locus_tag=LU631_RS18745;product=class I ribonucleotide reductase maintenance protein YfaE;protein_id=WP_016189973.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3562776 3563099 . + . ID=gene-LU631_RS18750;Name=LU631_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18750;old_locus_tag=LU631_18750 NZ_CP089940.1 GeneMarkS-2+ CDS 3562776 3563099 . + 0 ID=cds-WP_040465300.1;Parent=gene-LU631_RS18750;Dbxref=Genbank:WP_040465300.1;Name=WP_040465300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS18750;product=hypothetical protein;protein_id=WP_040465300.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3563288 3563791 . - . ID=gene-LU631_RS18755;Name=LU631_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18755;old_locus_tag=LU631_18755 NZ_CP089940.1 Protein Homology CDS 3563288 3563791 . - 0 ID=cds-WP_046371877.1;Parent=gene-LU631_RS18755;Dbxref=Genbank:WP_046371877.1;Name=WP_046371877.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU631_RS18755;product=IS1 family transposase;protein_id=WP_046371877.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3564358 3565563 . - . ID=gene-LU631_RS18765;Name=LU631_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18765;old_locus_tag=LU631_18765 NZ_CP089940.1 Protein Homology CDS 3564358 3565563 . - 0 ID=cds-WP_016189975.1;Parent=gene-LU631_RS18765;Dbxref=Genbank:WP_016189975.1;Name=WP_016189975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358565.1;locus_tag=LU631_RS18765;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_016189975.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3565848 3567218 . - . ID=gene-LU631_RS18770;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=LU631_RS18770;old_locus_tag=LU631_18770 NZ_CP089940.1 Protein Homology CDS 3565848 3567218 . - 0 ID=cds-WP_016189976.1;Parent=gene-LU631_RS18770;Dbxref=Genbank:WP_016189976.1;Name=WP_016189976.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012764671.1;locus_tag=LU631_RS18770;product=o-succinylbenzoate--CoA ligase;protein_id=WP_016189976.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3567206 3568177 . - . ID=gene-LU631_RS18775;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=LU631_RS18775;old_locus_tag=LU631_18775 NZ_CP089940.1 Protein Homology CDS 3567206 3568177 . - 0 ID=cds-WP_040465403.1;Parent=gene-LU631_RS18775;Dbxref=Genbank:WP_040465403.1;Name=WP_040465403.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203065.1;locus_tag=LU631_RS18775;product=o-succinylbenzoate synthase;protein_id=WP_040465403.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3568177 3569034 . - . ID=gene-LU631_RS18780;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=LU631_RS18780;old_locus_tag=LU631_18780 NZ_CP089940.1 Protein Homology CDS 3568177 3569034 . - 0 ID=cds-WP_016189978.1;Parent=gene-LU631_RS18780;Dbxref=Genbank:WP_016189978.1;Name=WP_016189978.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228027.1;locus_tag=LU631_RS18780;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_016189978.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3569044 3569808 . - . ID=gene-LU631_RS18785;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=LU631_RS18785;old_locus_tag=LU631_18785 NZ_CP089940.1 Protein Homology CDS 3569044 3569808 . - 0 ID=cds-WP_016189979.1;Parent=gene-LU631_RS18785;Dbxref=Genbank:WP_016189979.1;Name=WP_016189979.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203067.1;locus_tag=LU631_RS18785;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_016189979.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3569805 3571466 . - . ID=gene-LU631_RS18790;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=LU631_RS18790;old_locus_tag=LU631_18790 NZ_CP089940.1 Protein Homology CDS 3569805 3571466 . - 0 ID=cds-WP_016189980.1;Parent=gene-LU631_RS18790;Dbxref=Genbank:WP_016189980.1;Name=WP_016189980.1;Ontology_term=GO:0009234,GO:0070204;gbkey=CDS;gene=menD;go_function=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295284.1;locus_tag=LU631_RS18790;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_016189980.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3571799 3572110 . - . ID=gene-LU631_RS18795;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=LU631_RS18795;old_locus_tag=LU631_18795 NZ_CP089940.1 Protein Homology CDS 3571799 3572110 . - 0 ID=cds-WP_016189981.1;Parent=gene-LU631_RS18795;Dbxref=Genbank:WP_016189981.1;Name=WP_016189981.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388266.1;locus_tag=LU631_RS18795;product=stress response protein ElaB;protein_id=WP_016189981.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3572301 3572537 . - . ID=gene-LU631_RS18800;Name=LU631_RS18800;end_range=3572537,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18800;old_locus_tag=LU631_18800;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3572301 3572537 . - 0 ID=cds-LU631_RS18800;Parent=gene-LU631_RS18800;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3572537,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002553320.1;locus_tag=LU631_RS18800;partial=true;product=glyoxalase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3572658 3573083 . + . ID=gene-LU631_RS18805;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS18805;old_locus_tag=LU631_18805;pseudo=true NZ_CP089940.1 Protein Homology CDS 3572658 3573083 . + 0 ID=cds-LU631_RS18805;Parent=gene-LU631_RS18805;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503164.1;locus_tag=LU631_RS18805;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3573186 3573359 . - . ID=gene-LU631_RS18810;Name=LU631_RS18810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18810;old_locus_tag=LU631_18810;partial=true;pseudo=true;start_range=.,3573186 NZ_CP089940.1 Protein Homology CDS 3573186 3573359 . - 0 ID=cds-LU631_RS18810;Parent=gene-LU631_RS18810;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002553320.1;locus_tag=LU631_RS18810;partial=true;product=glyoxalase;pseudo=true;start_range=.,3573186;transl_table=11 NZ_CP089940.1 RefSeq gene 3573394 3573522 . + . ID=gene-LU631_RS18815;Name=LU631_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18815;old_locus_tag=LU631_18815 NZ_CP089940.1 Protein Homology CDS 3573394 3573522 . + 0 ID=cds-WP_232426827.1;Parent=gene-LU631_RS18815;Dbxref=Genbank:WP_232426827.1;Name=WP_232426827.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012354.2;locus_tag=LU631_RS18815;product=LysR family transcriptional regulator;protein_id=WP_232426827.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3573552 3574574 . - . ID=gene-LU631_RS18820;Name=LU631_RS18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18820;old_locus_tag=LU631_18820 NZ_CP089940.1 Protein Homology CDS 3573552 3574574 . - 0 ID=cds-WP_016189985.1;Parent=gene-LU631_RS18820;Dbxref=Genbank:WP_016189985.1;Name=WP_016189985.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027224.2;locus_tag=LU631_RS18820;product=BNR-4 repeat-containing protein;protein_id=WP_016189985.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3574623 3575468 . - . ID=gene-LU631_RS26180;Name=LU631_RS26180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26180 NZ_CP089940.1 Protein Homology CDS 3574623 3575468 . - 0 ID=cds-WP_016189986.1;Parent=gene-LU631_RS26180;Dbxref=Genbank:WP_016189986.1;Name=WP_016189986.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021627.2;locus_tag=LU631_RS26180;product=protease (I) and scaffold (Z) protein;protein_id=WP_016189986.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3575465 3576007 . - . ID=gene-LU631_RS26185;Name=LU631_RS26185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26185 NZ_CP089940.1 Protein Homology CDS 3575465 3576007 . - 0 ID=cds-WP_016189987.1;Parent=gene-LU631_RS26185;Dbxref=Genbank:WP_016189987.1;Name=WP_016189987.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021627.2;locus_tag=LU631_RS26185;product=Mu-like prophage I protein;protein_id=WP_016189987.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3576227 3576436 . - . ID=gene-LU631_RS18830;Name=LU631_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18830;old_locus_tag=LU631_18830 NZ_CP089940.1 GeneMarkS-2+ CDS 3576227 3576436 . - 0 ID=cds-WP_016189988.1;Parent=gene-LU631_RS18830;Dbxref=Genbank:WP_016189988.1;Name=WP_016189988.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS18830;product=hypothetical protein;protein_id=WP_016189988.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3576470 3577006 . - . ID=gene-LU631_RS18835;Name=LU631_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18835;old_locus_tag=LU631_18835 NZ_CP089940.1 GeneMarkS-2+ CDS 3576470 3577006 . - 0 ID=cds-WP_232426807.1;Parent=gene-LU631_RS18835;Dbxref=Genbank:WP_232426807.1;Name=WP_232426807.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS18835;product=hypothetical protein;protein_id=WP_232426807.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3577131 3577313 . - . ID=gene-LU631_RS18840;Name=LU631_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18840;old_locus_tag=LU631_18840 NZ_CP089940.1 GeneMarkS-2+ CDS 3577131 3577313 . - 0 ID=cds-WP_016189990.1;Parent=gene-LU631_RS18840;Dbxref=Genbank:WP_016189990.1;Name=WP_016189990.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS18840;product=hypothetical protein;protein_id=WP_016189990.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3577302 3577595 . + . ID=gene-LU631_RS18845;Name=LU631_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18845;old_locus_tag=LU631_18845 NZ_CP089940.1 Protein Homology CDS 3577302 3577595 . + 0 ID=cds-WP_016189991.1;Parent=gene-LU631_RS18845;Dbxref=Genbank:WP_016189991.1;Name=WP_016189991.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=LU631_RS18845;product=LysR substrate-binding domain-containing protein;protein_id=WP_016189991.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3577615 3577815 . + . ID=gene-LU631_RS18850;Name=LU631_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18850;old_locus_tag=LU631_18850 NZ_CP089940.1 GeneMarkS-2+ CDS 3577615 3577815 . + 0 ID=cds-WP_016189992.1;Parent=gene-LU631_RS18850;Dbxref=Genbank:WP_016189992.1;Name=WP_016189992.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS18850;product=hypothetical protein;protein_id=WP_016189992.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3578025 3579677 . + . ID=gene-LU631_RS18855;Name=LU631_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18855;old_locus_tag=LU631_18855 NZ_CP089940.1 Protein Homology CDS 3578025 3579677 . + 0 ID=cds-WP_040465407.1;Parent=gene-LU631_RS18855;Dbxref=Genbank:WP_040465407.1;Name=WP_040465407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008105127.1;locus_tag=LU631_RS18855;product=glucan biosynthesis protein D;protein_id=WP_040465407.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3580181 3580321 . + . ID=gene-LU631_RS18860;Name=LU631_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18860;old_locus_tag=LU631_18860 NZ_CP089940.1 GeneMarkS-2+ CDS 3580181 3580321 . + 0 ID=cds-WP_161796965.1-16;Parent=gene-LU631_RS18860;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS18860;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3580330 3581544 . + . ID=gene-LU631_RS18865;Name=LU631_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18865;old_locus_tag=LU631_18865 NZ_CP089940.1 Protein Homology CDS 3580330 3581544 . + 0 ID=cds-WP_046371879.1-14;Parent=gene-LU631_RS18865;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS18865;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3581868 3582074 . - . ID=gene-LU631_RS18870;Name=LU631_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18870;old_locus_tag=LU631_18870 NZ_CP089940.1 GeneMarkS-2+ CDS 3581868 3582074 . - 0 ID=cds-WP_016189994.1;Parent=gene-LU631_RS18870;Dbxref=Genbank:WP_016189994.1;Name=WP_016189994.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS18870;product=hypothetical protein;protein_id=WP_016189994.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3582368 3583689 . + . ID=gene-LU631_RS18875;Name=LU631_RS18875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18875;old_locus_tag=LU631_18875;pseudo=true NZ_CP089940.1 Protein Homology CDS 3582368 3583689 . + 0 ID=cds-LU631_RS18875;Parent=gene-LU631_RS18875;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS18875;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3583735 3585192 . - . ID=gene-LU631_RS18880;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=LU631_RS18880;old_locus_tag=LU631_18880 NZ_CP089940.1 Protein Homology CDS 3583735 3585192 . - 0 ID=cds-WP_016189995.1;Parent=gene-LU631_RS18880;Dbxref=Genbank:WP_016189995.1;Name=WP_016189995.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013026503.1;locus_tag=LU631_RS18880;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_016189995.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3585199 3586719 . - . ID=gene-LU631_RS18885;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=LU631_RS18885;old_locus_tag=LU631_18885 NZ_CP089940.1 Protein Homology CDS 3585199 3586719 . - 0 ID=cds-WP_016189996.1;Parent=gene-LU631_RS18885;Dbxref=Genbank:WP_016189996.1;Name=WP_016189996.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=LU631_RS18885;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_016189996.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3586940 3588778 . - . ID=gene-LU631_RS18890;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=LU631_RS18890;old_locus_tag=LU631_18890 NZ_CP089940.1 Protein Homology CDS 3586940 3588778 . - 0 ID=cds-WP_016189997.1;Parent=gene-LU631_RS18890;Dbxref=Genbank:WP_016189997.1;Name=WP_016189997.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015699850.1;locus_tag=LU631_RS18890;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_016189997.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3588775 3589077 . - . ID=gene-LU631_RS18895;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=LU631_RS18895;old_locus_tag=LU631_18895 NZ_CP089940.1 Protein Homology CDS 3588775 3589077 . - 0 ID=cds-WP_016189998.1;Parent=gene-LU631_RS18895;Dbxref=Genbank:WP_016189998.1;Name=WP_016189998.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=LU631_RS18895;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_016189998.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3589074 3589622 . - . ID=gene-LU631_RS18900;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=LU631_RS18900;old_locus_tag=LU631_18900 NZ_CP089940.1 Protein Homology CDS 3589074 3589622 . - 0 ID=cds-WP_016189999.1;Parent=gene-LU631_RS18900;Dbxref=Genbank:WP_016189999.1;Name=WP_016189999.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158590.1;locus_tag=LU631_RS18900;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_016189999.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3589633 3590175 . - . ID=gene-LU631_RS18905;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=LU631_RS18905;old_locus_tag=LU631_18905 NZ_CP089940.1 Protein Homology CDS 3589633 3590175 . - 0 ID=cds-WP_016190000.1;Parent=gene-LU631_RS18905;Dbxref=Genbank:WP_016190000.1;Name=WP_016190000.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461263.1;locus_tag=LU631_RS18905;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_016190000.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3590189 3591166 . - . ID=gene-LU631_RS18910;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=LU631_RS18910;old_locus_tag=LU631_18910 NZ_CP089940.1 Protein Homology CDS 3590189 3591166 . - 0 ID=cds-WP_016190001.1;Parent=gene-LU631_RS18910;Dbxref=Genbank:WP_016190001.1;Name=WP_016190001.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=LU631_RS18910;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_016190001.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3591163 3593889 . - . ID=gene-LU631_RS18915;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=LU631_RS18915;old_locus_tag=LU631_18915 NZ_CP089940.1 Protein Homology CDS 3591163 3593889 . - 0 ID=cds-WP_016190002.1;Parent=gene-LU631_RS18915;Dbxref=Genbank:WP_016190002.1;Name=WP_016190002.1;Ontology_term=GO:0006120,GO:0050136;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015699849.1;locus_tag=LU631_RS18915;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_016190002.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3594004 3595350 . - . ID=gene-LU631_RS18920;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=LU631_RS18920;old_locus_tag=LU631_18920 NZ_CP089940.1 Protein Homology CDS 3594004 3595350 . - 0 ID=cds-WP_016190003.1;Parent=gene-LU631_RS18920;Dbxref=Genbank:WP_016190003.1;Name=WP_016190003.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015699848.1;locus_tag=LU631_RS18920;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_016190003.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3595347 3595862 . - . ID=gene-LU631_RS18925;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=LU631_RS18925;old_locus_tag=LU631_18925 NZ_CP089940.1 Protein Homology CDS 3595347 3595862 . - 0 ID=cds-WP_016190004.1;Parent=gene-LU631_RS18925;Dbxref=Genbank:WP_016190004.1;Name=WP_016190004.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=LU631_RS18925;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_016190004.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3595865 3597664 . - . ID=gene-LU631_RS18930;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=LU631_RS18930;old_locus_tag=LU631_18930 NZ_CP089940.1 Protein Homology CDS 3595865 3597664 . - 0 ID=cds-WP_016190005.1;Parent=gene-LU631_RS18930;Dbxref=Genbank:WP_016190005.1;Name=WP_016190005.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007716039.1;locus_tag=LU631_RS18930;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_016190005.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3597771 3598445 . - . ID=gene-LU631_RS18935;Name=LU631_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18935;old_locus_tag=LU631_18935 NZ_CP089940.1 Protein Homology CDS 3597771 3598445 . - 0 ID=cds-WP_016190006.1;Parent=gene-LU631_RS18935;Dbxref=Genbank:WP_016190006.1;Name=WP_016190006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228044.1;locus_tag=LU631_RS18935;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_016190006.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3598461 3598898 . - . ID=gene-LU631_RS18940;Name=LU631_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18940;old_locus_tag=LU631_18940 NZ_CP089940.1 Protein Homology CDS 3598461 3598898 . - 0 ID=cds-WP_016190007.1;Parent=gene-LU631_RS18940;Dbxref=Genbank:WP_016190007.1;Name=WP_016190007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158614.1;locus_tag=LU631_RS18940;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_016190007.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3599560 3600486 . - . ID=gene-LU631_RS18945;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=LU631_RS18945;old_locus_tag=LU631_18945 NZ_CP089940.1 Protein Homology CDS 3599560 3600486 . - 0 ID=cds-WP_016190008.1;Parent=gene-LU631_RS18945;Dbxref=Genbank:WP_016190008.1;Name=WP_016190008.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004960536.1;locus_tag=LU631_RS18945;product=transcriptional regulator LrhA;protein_id=WP_016190008.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3601337 3602551 . + . ID=gene-LU631_RS18950;Name=LU631_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18950;old_locus_tag=LU631_18950 NZ_CP089940.1 Protein Homology CDS 3601337 3602551 . + 0 ID=cds-WP_016190009.1;Parent=gene-LU631_RS18950;Dbxref=Genbank:WP_016190009.1;Name=WP_016190009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371084.1;locus_tag=LU631_RS18950;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_016190009.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3602673 3603269 . + . ID=gene-LU631_RS18955;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=LU631_RS18955;old_locus_tag=LU631_18955 NZ_CP089940.1 Protein Homology CDS 3602673 3603269 . + 0 ID=cds-WP_016190010.1;Parent=gene-LU631_RS18955;Dbxref=Genbank:WP_016190010.1;Name=WP_016190010.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158619.1;locus_tag=LU631_RS18955;product=5'-deoxynucleotidase;protein_id=WP_016190010.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3603274 3605106 . - . ID=gene-LU631_RS18960;Name=LU631_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18960;old_locus_tag=LU631_18960 NZ_CP089940.1 Protein Homology CDS 3603274 3605106 . - 0 ID=cds-WP_016190011.1;Parent=gene-LU631_RS18960;Dbxref=Genbank:WP_016190011.1;Name=WP_016190011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004705537.1;locus_tag=LU631_RS18960;product=SLC13 family permease;protein_id=WP_016190011.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3605184 3605843 . - . ID=gene-LU631_RS18965;Name=LU631_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18965;old_locus_tag=LU631_18965 NZ_CP089940.1 Protein Homology CDS 3605184 3605843 . - 0 ID=cds-WP_016190012.1;Parent=gene-LU631_RS18965;Dbxref=Genbank:WP_016190012.1;Name=WP_016190012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158630.1;locus_tag=LU631_RS18965;product=sugar phosphatase;protein_id=WP_016190012.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3605858 3606352 . - . ID=gene-LU631_RS18970;Name=LU631_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18970;old_locus_tag=LU631_18970 NZ_CP089940.1 Protein Homology CDS 3605858 3606352 . - 0 ID=cds-WP_016190013.1;Parent=gene-LU631_RS18970;Dbxref=Genbank:WP_016190013.1;Name=WP_016190013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416797.2;locus_tag=LU631_RS18970;product=YfbU family protein;protein_id=WP_016190013.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3606497 3606949 . - . ID=gene-LU631_RS18975;Name=LU631_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18975;old_locus_tag=LU631_18975 NZ_CP089940.1 Protein Homology CDS 3606497 3606949 . - 0 ID=cds-WP_016190014.1;Parent=gene-LU631_RS18975;Dbxref=Genbank:WP_016190014.1;Name=WP_016190014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000106627.1;locus_tag=LU631_RS18975;product=DUF412 domain-containing protein;protein_id=WP_016190014.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3607266 3608468 . + . ID=gene-LU631_RS18980;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=LU631_RS18980;old_locus_tag=LU631_18980 NZ_CP089940.1 Protein Homology CDS 3607266 3608468 . + 0 ID=cds-WP_016190015.1;Parent=gene-LU631_RS18980;Dbxref=Genbank:WP_016190015.1;Name=WP_016190015.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=LU631_RS18980;product=acetate kinase;protein_id=WP_016190015.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3608648 3610795 . + . ID=gene-LU631_RS18985;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=LU631_RS18985;old_locus_tag=LU631_18985 NZ_CP089940.1 Protein Homology CDS 3608648 3610795 . + 0 ID=cds-WP_016190016.1;Parent=gene-LU631_RS18985;Dbxref=Genbank:WP_016190016.1;Name=WP_016190016.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013034886.1;locus_tag=LU631_RS18985;product=phosphate acetyltransferase;protein_id=WP_016190016.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3610847 3611155 . - . ID=gene-LU631_RS18990;Name=LU631_RS18990;end_range=3611155,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS18990;old_locus_tag=LU631_18990;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3610847 3611155 . - 0 ID=cds-LU631_RS18990;Parent=gene-LU631_RS18990;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0005524,GO:0022857,GO:0043190;end_range=3611155,.;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004173026.1;locus_tag=LU631_RS18990;partial=true;product=TOBE domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3611355 3611690 . + . ID=gene-LU631_RS18995;Name=LU631_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS18995;old_locus_tag=LU631_18995 NZ_CP089940.1 GeneMarkS-2+ CDS 3611355 3611690 . + 0 ID=cds-WP_052734695.1-12;Parent=gene-LU631_RS18995;Dbxref=Genbank:WP_052734695.1;Name=WP_052734695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS18995;product=hypothetical protein;protein_id=WP_052734695.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3611699 3612913 . + . ID=gene-LU631_RS19000;Name=LU631_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19000;old_locus_tag=LU631_19000 NZ_CP089940.1 Protein Homology CDS 3611699 3612913 . + 0 ID=cds-WP_046371879.1-15;Parent=gene-LU631_RS19000;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS19000;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3613604 3614542 . - . ID=gene-LU631_RS19005;Name=LU631_RS19005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19005;old_locus_tag=LU631_19005;pseudo=true NZ_CP089940.1 Protein Homology CDS 3613604 3614542 . - 0 ID=cds-LU631_RS19005;Parent=gene-LU631_RS19005;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026564.1;locus_tag=LU631_RS19005;product=omptin family outer membrane protease;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3614869 3615393 . + . ID=gene-LU631_RS19010;Name=LU631_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19010;old_locus_tag=LU631_19010 NZ_CP089940.1 Protein Homology CDS 3614869 3615393 . + 0 ID=cds-WP_232426808.1;Parent=gene-LU631_RS19010;Dbxref=Genbank:WP_232426808.1;Name=WP_232426808.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025677.2;locus_tag=LU631_RS19010;product=transposase zinc-binding domain-containing protein;protein_id=WP_232426808.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3615293 3615733 . + . ID=gene-LU631_RS26190;Name=LU631_RS26190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26190 NZ_CP089940.1 Protein Homology CDS 3615293 3615733 . + 0 ID=cds-WP_267921500.1;Parent=gene-LU631_RS26190;Dbxref=Genbank:WP_267921500.1;Name=WP_267921500.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26190;product=transposase;protein_id=WP_267921500.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3615714 3616040 . + . ID=gene-LU631_RS26195;Name=LU631_RS26195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26195 NZ_CP089940.1 Protein Homology CDS 3615714 3616040 . + 0 ID=cds-WP_267921501.1;Parent=gene-LU631_RS26195;Dbxref=Genbank:WP_267921501.1;Name=WP_267921501.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26195;product=transposase;protein_id=WP_267921501.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3616303 3616827 . - . ID=gene-LU631_RS19020;Name=LU631_RS19020;end_range=3616827,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19020;old_locus_tag=LU631_19020;partial=true;pseudo=true;start_range=.,3616303 NZ_CP089940.1 Protein Homology CDS 3616303 3616827 . - 0 ID=cds-LU631_RS19020;Parent=gene-LU631_RS19020;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0005524;end_range=3616827,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192780.1;locus_tag=LU631_RS19020;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;start_range=.,3616303;transl_table=11 NZ_CP089940.1 RefSeq gene 3616835 3617338 . - . ID=gene-LU631_RS19025;Name=LU631_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19025;old_locus_tag=LU631_19025 NZ_CP089940.1 Protein Homology CDS 3616835 3617338 . - 0 ID=cds-WP_072052814.1;Parent=gene-LU631_RS19025;Dbxref=Genbank:WP_072052814.1;Name=WP_072052814.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU631_RS19025;product=IS1 family transposase;protein_id=WP_072052814.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3617257 3617532 . - . ID=gene-LU631_RS19030;Name=LU631_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19030;old_locus_tag=LU631_19030 NZ_CP089940.1 Protein Homology CDS 3617257 3617532 . - 0 ID=cds-WP_072052792.1-2;Parent=gene-LU631_RS19030;Dbxref=Genbank:WP_072052792.1;Name=WP_072052792.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU631_RS19030;product=IS1-like element transposase;protein_id=WP_072052792.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3617603 3618145 . - . ID=gene-LU631_RS19035;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=LU631_RS19035;old_locus_tag=LU631_19035 NZ_CP089940.1 Protein Homology CDS 3617603 3618145 . - 0 ID=cds-WP_016190020.1;Parent=gene-LU631_RS19035;Dbxref=Genbank:WP_016190020.1;Name=WP_016190020.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010616065.1;locus_tag=LU631_RS19035;product=NUDIX hydrolase YfcD;protein_id=WP_016190020.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3618240 3618887 . - . ID=gene-LU631_RS19040;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=LU631_RS19040;old_locus_tag=LU631_19040 NZ_CP089940.1 Protein Homology CDS 3618240 3618887 . - 0 ID=cds-WP_016190021.1;Parent=gene-LU631_RS19040;Dbxref=Genbank:WP_016190021.1;Name=WP_016190021.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440928.1;locus_tag=LU631_RS19040;product=glutathione transferase;protein_id=WP_016190021.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3619114 3620007 . + . ID=gene-LU631_RS19045;Name=LU631_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19045;old_locus_tag=LU631_19045 NZ_CP089940.1 Protein Homology CDS 3619114 3620007 . + 0 ID=cds-WP_016190022.1;Parent=gene-LU631_RS19045;Dbxref=Genbank:WP_016190022.1;Name=WP_016190022.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803408.1;locus_tag=LU631_RS19045;product=TIGR01777 family oxidoreductase;protein_id=WP_016190022.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3620331 3620721 . - . ID=gene-LU631_RS19050;Name=LU631_RS19050;end_range=3620721,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19050;old_locus_tag=LU631_19050;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3620331 3620721 . - 0 ID=cds-LU631_RS19050;Parent=gene-LU631_RS19050;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;end_range=3620721,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209738.1;locus_tag=LU631_RS19050;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3620759 3621328 . - . ID=gene-LU631_RS19055;Name=LU631_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19055;old_locus_tag=LU631_19055 NZ_CP089940.1 Protein Homology CDS 3620759 3621328 . - 0 ID=cds-WP_016190026.1;Parent=gene-LU631_RS19055;Dbxref=Genbank:WP_016190026.1;Name=WP_016190026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228070.1;locus_tag=LU631_RS19055;product=UbiX family flavin prenyltransferase;protein_id=WP_016190026.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3621425 3622942 . - . ID=gene-LU631_RS19060;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=LU631_RS19060;old_locus_tag=LU631_19060 NZ_CP089940.1 Protein Homology CDS 3621425 3622942 . - 0 ID=cds-WP_016190027.1;Parent=gene-LU631_RS19060;Dbxref=Genbank:WP_016190027.1;Name=WP_016190027.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=LU631_RS19060;product=amidophosphoribosyltransferase;protein_id=WP_016190027.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3622980 3623465 . - . ID=gene-LU631_RS19065;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=LU631_RS19065;old_locus_tag=LU631_19065 NZ_CP089940.1 Protein Homology CDS 3622980 3623465 . - 0 ID=cds-WP_016190028.1;Parent=gene-LU631_RS19065;Dbxref=Genbank:WP_016190028.1;Name=WP_016190028.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190028.1;locus_tag=LU631_RS19065;product=colicin V production protein;protein_id=WP_016190028.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3623903 3624637 . - . ID=gene-LU631_RS19070;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=LU631_RS19070;old_locus_tag=LU631_19070 NZ_CP089940.1 Protein Homology CDS 3623903 3624637 . - 0 ID=cds-WP_016190029.1;Parent=gene-LU631_RS19070;Dbxref=Genbank:WP_016190029.1;Name=WP_016190029.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854266.1;locus_tag=LU631_RS19070;product=cell division protein DedD;protein_id=WP_016190029.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3624627 3625889 . - . ID=gene-LU631_RS19075;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=LU631_RS19075;old_locus_tag=LU631_19075 NZ_CP089940.1 Protein Homology CDS 3624627 3625889 . - 0 ID=cds-WP_016190030.1;Parent=gene-LU631_RS19075;Dbxref=Genbank:WP_016190030.1;Name=WP_016190030.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170367.1;locus_tag=LU631_RS19075;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_016190030.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3625954 3626868 . - . ID=gene-LU631_RS19080;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=LU631_RS19080;old_locus_tag=LU631_19080 NZ_CP089940.1 Protein Homology CDS 3625954 3626868 . - 0 ID=cds-WP_016190031.1;Parent=gene-LU631_RS19080;Dbxref=Genbank:WP_016190031.1;Name=WP_016190031.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803398.1;locus_tag=LU631_RS19080;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_016190031.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3627157 3628581 . - . ID=gene-LU631_RS19085;Name=LU631_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19085;old_locus_tag=LU631_19085 NZ_CP089940.1 GeneMarkS-2+ CDS 3627157 3628581 . - 0 ID=cds-WP_016190032.1;Parent=gene-LU631_RS19085;Dbxref=Genbank:WP_016190032.1;Name=WP_016190032.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19085;product=hypothetical protein;protein_id=WP_016190032.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3628941 3629483 . + . ID=gene-LU631_RS19090;Name=LU631_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19090;old_locus_tag=LU631_19090 NZ_CP089940.1 Protein Homology CDS 3628941 3629483 . + 0 ID=cds-WP_016190033.1;Parent=gene-LU631_RS19090;Dbxref=Genbank:WP_016190033.1;Name=WP_016190033.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544635.1;locus_tag=LU631_RS19090;product=chorismate mutase;protein_id=WP_016190033.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3629768 3630427 . - . ID=gene-LU631_RS19095;Name=LU631_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19095;old_locus_tag=LU631_19095 NZ_CP089940.1 Protein Homology CDS 3629768 3630427 . - 0 ID=cds-WP_016190034.1;Parent=gene-LU631_RS19095;Dbxref=Genbank:WP_016190034.1;Name=WP_016190034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203126.1;locus_tag=LU631_RS19095;product=DedA family protein;protein_id=WP_016190034.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3630457 3631272 . - . ID=gene-LU631_RS19100;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=LU631_RS19100;old_locus_tag=LU631_19100 NZ_CP089940.1 Protein Homology CDS 3630457 3631272 . - 0 ID=cds-WP_016190035.1;Parent=gene-LU631_RS19100;Dbxref=Genbank:WP_016190035.1;Name=WP_016190035.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311229.1;locus_tag=LU631_RS19100;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_016190035.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3631272 3632282 . - . ID=gene-LU631_RS19105;Name=LU631_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19105;old_locus_tag=LU631_19105 NZ_CP089940.1 Protein Homology CDS 3631272 3632282 . - 0 ID=cds-WP_016190036.1;Parent=gene-LU631_RS19105;Dbxref=Genbank:WP_016190036.1;Name=WP_016190036.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667557.1;locus_tag=LU631_RS19105;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_016190036.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3632392 3633504 . - . ID=gene-LU631_RS19110;Name=LU631_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19110;old_locus_tag=LU631_19110 NZ_CP089940.1 Protein Homology CDS 3632392 3633504 . - 0 ID=cds-WP_152664273.1;Parent=gene-LU631_RS19110;Dbxref=Genbank:WP_152664273.1;Name=WP_152664273.1;Ontology_term=GO:0046983;gbkey=CDS;go_function=protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203129.1;locus_tag=LU631_RS19110;product=DUF3410 domain-containing protein;protein_id=WP_152664273.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3634173 3635207 . + . ID=gene-LU631_RS19115;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=LU631_RS19115;old_locus_tag=LU631_19115 NZ_CP089940.1 Protein Homology CDS 3634173 3635207 . + 0 ID=cds-WP_016190038.1;Parent=gene-LU631_RS19115;Dbxref=Genbank:WP_016190038.1;Name=WP_016190038.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170378.1;locus_tag=LU631_RS19115;product=flagella biosynthesis regulator Flk;protein_id=WP_016190038.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3635749 3636972 . - . ID=gene-LU631_RS19120;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=LU631_RS19120;old_locus_tag=LU631_19120 NZ_CP089940.1 Protein Homology CDS 3635749 3636972 . - 0 ID=cds-WP_016190039.1;Parent=gene-LU631_RS19120;Dbxref=Genbank:WP_016190039.1;Name=WP_016190039.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203143.1;locus_tag=LU631_RS19120;product=beta-ketoacyl-ACP synthase I;protein_id=WP_016190039.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3637128 3639128 . + . ID=gene-LU631_RS19125;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=LU631_RS19125;old_locus_tag=LU631_19125 NZ_CP089940.1 Protein Homology CDS 3637128 3639128 . + 0 ID=cds-WP_016190040.1;Parent=gene-LU631_RS19125;Dbxref=Genbank:WP_016190040.1;Name=WP_016190040.1;gbkey=CDS;gene=mnmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020240147.1;locus_tag=LU631_RS19125;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_016190040.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3639178 3639459 . - . ID=gene-LU631_RS19130;Name=LU631_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19130;old_locus_tag=LU631_19130 NZ_CP089940.1 Protein Homology CDS 3639178 3639459 . - 0 ID=cds-WP_016190041.1;Parent=gene-LU631_RS19130;Dbxref=Genbank:WP_016190041.1;Name=WP_016190041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203145.1;locus_tag=LU631_RS19130;product=YfcL family protein;protein_id=WP_016190041.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3639490 3640035 . - . ID=gene-LU631_RS19135;Name=LU631_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19135;old_locus_tag=LU631_19135 NZ_CP089940.1 Protein Homology CDS 3639490 3640035 . - 0 ID=cds-WP_016190042.1;Parent=gene-LU631_RS19135;Dbxref=Genbank:WP_016190042.1;Name=WP_016190042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007889222.1;locus_tag=LU631_RS19135;product=elongation factor P hydroxylase;protein_id=WP_016190042.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3640084 3640887 . - . ID=gene-LU631_RS19140;Name=LU631_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19140;old_locus_tag=LU631_19140 NZ_CP089940.1 Protein Homology CDS 3640084 3640887 . - 0 ID=cds-WP_016190043.1;Parent=gene-LU631_RS19140;Dbxref=Genbank:WP_016190043.1;Name=WP_016190043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803379.1;locus_tag=LU631_RS19140;product=sulfite exporter TauE/SafE family protein;protein_id=WP_016190043.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3640919 3641723 . - . ID=gene-LU631_RS19145;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=pseudogene;locus_tag=LU631_RS19145;old_locus_tag=LU631_19145;pseudo=true NZ_CP089940.1 Protein Homology CDS 3640919 3641723 . - 0 ID=cds-LU631_RS19145;Parent=gene-LU631_RS19145;Note=frameshifted;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750422.1;locus_tag=LU631_RS19145;product=penicillin-insensitive murein endopeptidase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3641734 3642819 . - . ID=gene-LU631_RS19150;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=LU631_RS19150;old_locus_tag=LU631_19150 NZ_CP089940.1 Protein Homology CDS 3641734 3642819 . - 0 ID=cds-WP_016190044.1;Parent=gene-LU631_RS19150;Dbxref=Genbank:WP_016190044.1;Name=WP_016190044.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311240.1;locus_tag=LU631_RS19150;product=chorismate synthase;protein_id=WP_016190044.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3642990 3643922 . - . ID=gene-LU631_RS19155;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=LU631_RS19155;old_locus_tag=LU631_19155 NZ_CP089940.1 Protein Homology CDS 3642990 3643922 . - 0 ID=cds-WP_016190045.1;Parent=gene-LU631_RS19155;Dbxref=Genbank:WP_016190045.1;Name=WP_016190045.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=LU631_RS19155;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_016190045.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3644095 3644646 . + . ID=gene-LU631_RS19160;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=LU631_RS19160;old_locus_tag=LU631_19160 NZ_CP089940.1 Protein Homology CDS 3644095 3644646 . + 0 ID=cds-WP_016190046.1;Parent=gene-LU631_RS19160;Dbxref=Genbank:WP_016190046.1;Name=WP_016190046.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416834.1;locus_tag=LU631_RS19160;product=endonuclease SmrB;protein_id=WP_016190046.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3644681 3645163 . - . ID=gene-LU631_RS19165;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=LU631_RS19165;old_locus_tag=LU631_19165 NZ_CP089940.1 Protein Homology CDS 3644681 3645163 . - 0 ID=cds-WP_016190047.1;Parent=gene-LU631_RS19165;Dbxref=Genbank:WP_016190047.1;Name=WP_016190047.1;Ontology_term=GO:0000160,GO:0101006;gbkey=CDS;gene=sixA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009088942.1;locus_tag=LU631_RS19165;product=phosphohistidine phosphatase SixA;protein_id=WP_016190047.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3645332 3645667 . - . ID=gene-LU631_RS19170;Name=LU631_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19170;old_locus_tag=LU631_19170 NZ_CP089940.1 GeneMarkS-2+ CDS 3645332 3645667 . - 0 ID=cds-WP_152664183.1;Parent=gene-LU631_RS19170;Dbxref=Genbank:WP_152664183.1;Name=WP_152664183.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19170;product=hypothetical protein;protein_id=WP_152664183.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3645790 3645972 . - . ID=gene-LU631_RS19175;Name=LU631_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19175;old_locus_tag=LU631_19175 NZ_CP089940.1 Protein Homology CDS 3645790 3645972 . - 0 ID=cds-WP_040465306.1;Parent=gene-LU631_RS19175;Dbxref=Genbank:WP_040465306.1;Name=WP_040465306.1;Ontology_term=GO:0006631,GO:0016491,GO:0016616;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: protein motif:HMM:NF012928.2;locus_tag=LU631_RS19175;product=3-hydroxyacyl-CoA dehydrogenase family protein;protein_id=WP_040465306.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3646044 3646647 . - . ID=gene-LU631_RS19180;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=pseudogene;locus_tag=LU631_RS19180;old_locus_tag=LU631_19180;partial=true;pseudo=true;start_range=.,3646044 NZ_CP089940.1 Protein Homology CDS 3646044 3646647 . - 0 ID=cds-LU631_RS19180;Parent=gene-LU631_RS19180;Note=FadI%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadJ%3B similar to FadA2B2 complex%3B functions in beta-oxidation of fatty acids during anaerobic growth%3B frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=fadI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915675.1;locus_tag=LU631_RS19180;partial=true;product=acetyl-CoA C-acyltransferase FadI;pseudo=true;start_range=.,3646044;transl_table=11 NZ_CP089940.1 RefSeq gene 3646821 3647117 . - . ID=gene-LU631_RS19185;Name=LU631_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19185;old_locus_tag=LU631_19185 NZ_CP089940.1 Protein Homology CDS 3646821 3647117 . - 0 ID=cds-WP_016190051.1;Parent=gene-LU631_RS19185;Dbxref=Genbank:WP_016190051.1;Name=WP_016190051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015841013.1;locus_tag=LU631_RS19185;product=YfcZ/YiiS family protein;protein_id=WP_016190051.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3647493 3648764 . + . ID=gene-LU631_RS19190;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=LU631_RS19190;old_locus_tag=LU631_19190 NZ_CP089940.1 Protein Homology CDS 3647493 3648764 . + 0 ID=cds-WP_016190052.1;Parent=gene-LU631_RS19190;Dbxref=Genbank:WP_016190052.1;Name=WP_016190052.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001766332.1;locus_tag=LU631_RS19190;product=long-chain fatty acid transporter FadL;protein_id=WP_016190052.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3648812 3649573 . - . ID=gene-LU631_RS19195;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=LU631_RS19195;old_locus_tag=LU631_19195 NZ_CP089940.1 Protein Homology CDS 3648812 3649573 . - 0 ID=cds-WP_016190053.1;Parent=gene-LU631_RS19195;Dbxref=Genbank:WP_016190053.1;Name=WP_016190053.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203158.1;locus_tag=LU631_RS19195;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_016190053.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3649678 3649899 . + . ID=gene-LU631_RS19200;Name=LU631_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19200;old_locus_tag=LU631_19200 NZ_CP089940.1 GeneMarkS-2+ CDS 3649678 3649899 . + 0 ID=cds-WP_152664184.1;Parent=gene-LU631_RS19200;Dbxref=Genbank:WP_152664184.1;Name=WP_152664184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19200;product=hypothetical protein;protein_id=WP_152664184.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3649931 3650296 . - . ID=gene-LU631_RS19205;Name=LU631_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19205;old_locus_tag=LU631_19205 NZ_CP089940.1 Protein Homology CDS 3649931 3650296 . - 0 ID=cds-WP_233480285.1;Parent=gene-LU631_RS19205;Dbxref=Genbank:WP_233480285.1;Name=WP_233480285.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015853.2;locus_tag=LU631_RS19205;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_233480285.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3651037 3652157 . - . ID=gene-LU631_RS19210;Name=LU631_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19210;old_locus_tag=LU631_19210 NZ_CP089940.1 Protein Homology CDS 3651899 3652157 . - 0 ID=cds-WP_152664185.1;Parent=gene-LU631_RS19210;Dbxref=Genbank:WP_152664185.1;Name=WP_152664185.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS19210;product=IS3 family transposase;protein_id=WP_152664185.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 3651037 3651899 . - 2 ID=cds-WP_152664185.1;Parent=gene-LU631_RS19210;Dbxref=Genbank:WP_152664185.1;Name=WP_152664185.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS19210;product=IS3 family transposase;protein_id=WP_152664185.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3652311 3653633 . + . ID=gene-LU631_RS19215;Name=LU631_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19215;old_locus_tag=LU631_19215 NZ_CP089940.1 Protein Homology CDS 3652311 3653633 . + 0 ID=cds-WP_046371900.1-4;Parent=gene-LU631_RS19215;Dbxref=Genbank:WP_046371900.1;Name=WP_046371900.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS19215;product=IS4 family transposase;protein_id=WP_046371900.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3654239 3655049 . - . ID=gene-LU631_RS19220;Name=LU631_RS19220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19220;old_locus_tag=LU631_19220;pseudo=true NZ_CP089940.1 Protein Homology CDS 3654239 3655049 . - 0 ID=cds-LU631_RS19220;Parent=gene-LU631_RS19220;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611678.1;locus_tag=LU631_RS19220;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3655303 3656343 . + . ID=gene-LU631_RS19225;Name=LU631_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19225;old_locus_tag=LU631_19225 NZ_CP089940.1 Protein Homology CDS 3655303 3656343 . + 0 ID=cds-WP_046371813.1-14;Parent=gene-LU631_RS19225;Dbxref=Genbank:WP_046371813.1;Name=WP_046371813.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS19225;product=IS481 family transposase;protein_id=WP_046371813.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3656590 3657810 . - . ID=gene-LU631_RS19230;Name=LU631_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19230;old_locus_tag=LU631_19230 NZ_CP089940.1 Protein Homology CDS 3656590 3657810 . - 0 ID=cds-WP_046371806.1-10;Parent=gene-LU631_RS19230;Dbxref=Genbank:WP_046371806.1;Name=WP_046371806.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025244073.1;locus_tag=LU631_RS19230;product=ISL3 family transposase;protein_id=WP_046371806.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3657910 3658155 . + . ID=gene-LU631_RS19235;Name=LU631_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19235;old_locus_tag=LU631_19235 NZ_CP089940.1 Protein Homology CDS 3657910 3658155 . + 0 ID=cds-WP_016190057.1;Parent=gene-LU631_RS19235;Dbxref=Genbank:WP_016190057.1;Name=WP_016190057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000497451.1;locus_tag=LU631_RS19235;product=DinI-like family protein;protein_id=WP_016190057.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3658360 3658800 . + . ID=gene-LU631_RS19240;Name=LU631_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19240;old_locus_tag=LU631_19240 NZ_CP089940.1 GeneMarkS-2+ CDS 3658360 3658800 . + 0 ID=cds-WP_016190058.1;Parent=gene-LU631_RS19240;Dbxref=Genbank:WP_016190058.1;Name=WP_016190058.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19240;product=hypothetical protein;protein_id=WP_016190058.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3658794 3659099 . + . ID=gene-LU631_RS19245;Name=LU631_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19245;old_locus_tag=LU631_19245 NZ_CP089940.1 Protein Homology CDS 3658794 3659099 . + 0 ID=cds-WP_016190059.1;Parent=gene-LU631_RS19245;Dbxref=Genbank:WP_016190059.1;Name=WP_016190059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669403.1;locus_tag=LU631_RS19245;product=DUF1493 family protein;protein_id=WP_016190059.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3659141 3659617 . - . ID=gene-LU631_RS19250;Name=LU631_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19250;old_locus_tag=LU631_19250 NZ_CP089940.1 GeneMarkS-2+ CDS 3659141 3659617 . - 0 ID=cds-WP_016190060.1;Parent=gene-LU631_RS19250;Dbxref=Genbank:WP_016190060.1;Name=WP_016190060.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19250;product=hypothetical protein;protein_id=WP_016190060.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3659861 3660172 . - . ID=gene-LU631_RS19255;Name=LU631_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19255;old_locus_tag=LU631_19255 NZ_CP089940.1 GeneMarkS-2+ CDS 3659861 3660172 . - 0 ID=cds-WP_016190061.1;Parent=gene-LU631_RS19255;Dbxref=Genbank:WP_016190061.1;Name=WP_016190061.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19255;product=hypothetical protein;protein_id=WP_016190061.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3660320 3660711 . - . ID=gene-LU631_RS19260;Name=LU631_RS19260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19260;old_locus_tag=LU631_19260;partial=true;pseudo=true;start_range=.,3660320 NZ_CP089940.1 Protein Homology CDS 3660320 3660711 . - 0 ID=cds-LU631_RS19260;Parent=gene-LU631_RS19260;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611429.1;locus_tag=LU631_RS19260;partial=true;product=transposase;pseudo=true;start_range=.,3660320;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3660788 3661268 . - . ID=gene-LU631_RS19265;Name=LU631_RS19265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19265;old_locus_tag=LU631_19265;partial=true;pseudo=true;start_range=.,3660788 NZ_CP089940.1 Protein Homology CDS 3660788 3661268 . - 0 ID=cds-LU631_RS19265;Parent=gene-LU631_RS19265;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000703634.1;locus_tag=LU631_RS19265;partial=true;product=glycosyltransferase family 2 protein;pseudo=true;start_range=.,3660788;transl_table=11 NZ_CP089940.1 RefSeq gene 3661265 3661624 . - . ID=gene-LU631_RS19270;Name=LU631_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19270;old_locus_tag=LU631_19270 NZ_CP089940.1 Protein Homology CDS 3661265 3661624 . - 0 ID=cds-WP_016190063.1;Parent=gene-LU631_RS19270;Dbxref=Genbank:WP_016190063.1;Name=WP_016190063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000915539.1;locus_tag=LU631_RS19270;product=GtrA family protein;protein_id=WP_016190063.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3661744 3662761 . - . ID=gene-LU631_RS19275;Name=LU631_RS19275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19275;old_locus_tag=LU631_19275;pseudo=true NZ_CP089940.1 Protein Homology CDS 3661744 3662761 . - 0 ID=cds-LU631_RS19275;Parent=gene-LU631_RS19275;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS19275;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3663091 3663561 . - . ID=gene-LU631_RS19280;Name=LU631_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19280;old_locus_tag=LU631_19280 NZ_CP089940.1 Protein Homology CDS 3663091 3663561 . - 0 ID=cds-WP_016190066.1;Parent=gene-LU631_RS19280;Dbxref=Genbank:WP_016190066.1;Name=WP_016190066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002384511.1;locus_tag=LU631_RS19280;product=DUF943 family protein;protein_id=WP_016190066.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3663558 3664393 . - . ID=gene-LU631_RS19285;Name=LU631_RS19285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19285;old_locus_tag=LU631_19285;pseudo=true NZ_CP089940.1 Protein Homology CDS 3663558 3664393 . - 0 ID=cds-LU631_RS19285;Parent=gene-LU631_RS19285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190077.1;locus_tag=LU631_RS19285;product=DUF3289 family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3664523 3664750 . + . ID=gene-LU631_RS19290;Name=LU631_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19290;old_locus_tag=LU631_19290 NZ_CP089940.1 GeneMarkS-2+ CDS 3664523 3664750 . + 0 ID=cds-WP_016190067.1;Parent=gene-LU631_RS19290;Dbxref=Genbank:WP_016190067.1;Name=WP_016190067.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19290;product=hypothetical protein;protein_id=WP_016190067.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3664827 3665282 . + . ID=gene-LU631_RS19295;Name=LU631_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19295;old_locus_tag=LU631_19295 NZ_CP089940.1 Protein Homology CDS 3664827 3665282 . + 0 ID=cds-WP_016190068.1;Parent=gene-LU631_RS19295;Dbxref=Genbank:WP_016190068.1;Name=WP_016190068.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: protein motif:HMM:NF018262.2;locus_tag=LU631_RS19295;product=antiterminator Q family protein;protein_id=WP_016190068.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3665515 3665874 . - . ID=gene-LU631_RS19300;Name=LU631_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19300;old_locus_tag=LU631_19300 NZ_CP089940.1 Protein Homology CDS 3665515 3665874 . - 0 ID=cds-WP_016190069.1;Parent=gene-LU631_RS19300;Dbxref=Genbank:WP_016190069.1;Name=WP_016190069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004607.1;locus_tag=LU631_RS19300;product=hypothetical protein;protein_id=WP_016190069.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3665879 3666073 . - . ID=gene-LU631_RS19305;Name=LU631_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19305;old_locus_tag=LU631_19305 NZ_CP089940.1 Protein Homology CDS 3665879 3666073 . - 0 ID=cds-WP_232426828.1;Parent=gene-LU631_RS19305;Dbxref=Genbank:WP_232426828.1;Name=WP_232426828.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039803.1;locus_tag=LU631_RS19305;product=DUF6516 family protein;protein_id=WP_232426828.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3666401 3667609 . - . ID=gene-LU631_RS19310;Name=LU631_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19310;old_locus_tag=LU631_19310 NZ_CP089940.1 Protein Homology CDS 3666401 3667609 . - 0 ID=cds-WP_016190071.1;Parent=gene-LU631_RS19310;Dbxref=Genbank:WP_016190071.1;Name=WP_016190071.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU631_RS19310;product=IS256 family transposase;protein_id=WP_016190071.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3667707 3668415 . - . ID=gene-LU631_RS19315;Name=LU631_RS19315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19315;old_locus_tag=LU631_19315;partial=true;pseudo=true;start_range=.,3667707 NZ_CP089940.1 Protein Homology CDS 3667707 3668415 . - 0 ID=cds-LU631_RS19315;Parent=gene-LU631_RS19315;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS19315;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,3667707;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3668567 3669716 . - . ID=gene-LU631_RS19320;Name=LU631_RS19320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19320;old_locus_tag=LU631_19320;partial=true;pseudo=true;start_range=.,3668567 NZ_CP089940.1 Protein Homology CDS 3668567 3669716 . - 0 ID=cds-LU631_RS19320;Parent=gene-LU631_RS19320;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120146.1;locus_tag=LU631_RS19320;partial=true;product=integrase family protein;pseudo=true;start_range=.,3668567;transl_table=11 NZ_CP089940.1 RefSeq gene 3669912 3669986 . + . ID=gene-LU631_RS19325;Name=LU631_RS19325;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS19325;old_locus_tag=LU631_19325 NZ_CP089940.1 tRNAscan-SE tRNA 3669912 3669986 . + . ID=rna-LU631_RS19325;Parent=gene-LU631_RS19325;anticodon=(pos:3669945..3669947);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS19325;product=tRNA-Arg NZ_CP089940.1 tRNAscan-SE exon 3669912 3669986 . + . ID=exon-LU631_RS19325-1;Parent=rna-LU631_RS19325;anticodon=(pos:3669945..3669947);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS19325;product=tRNA-Arg NZ_CP089940.1 RefSeq pseudogene 3670151 3671449 . + . ID=gene-LU631_RS19330;Name=LU631_RS19330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19330;old_locus_tag=LU631_19330;pseudo=true NZ_CP089940.1 Protein Homology CDS 3670151 3671449 . + 0 ID=cds-LU631_RS19330;Parent=gene-LU631_RS19330;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000772685.1;locus_tag=LU631_RS19330;product=integrase arm-type DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3671803 3672237 . - . ID=gene-LU631_RS19335;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS19335;old_locus_tag=LU631_19335;pseudo=true NZ_CP089940.1 Protein Homology CDS 3671803 3672237 . - 0 ID=cds-LU631_RS19335;Parent=gene-LU631_RS19335;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000525033.1;locus_tag=LU631_RS19335;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3672359 3672595 . - . ID=gene-LU631_RS19340;Name=LU631_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19340;old_locus_tag=LU631_19340 NZ_CP089940.1 GeneMarkS-2+ CDS 3672359 3672595 . - 0 ID=cds-WP_016190075.1;Parent=gene-LU631_RS19340;Dbxref=Genbank:WP_016190075.1;Name=WP_016190075.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19340;product=hypothetical protein;protein_id=WP_016190075.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3672588 3672881 . - . ID=gene-LU631_RS19345;Name=LU631_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19345;old_locus_tag=LU631_19345 NZ_CP089940.1 Protein Homology CDS 3672588 3672881 . - 0 ID=cds-WP_016190076.1;Parent=gene-LU631_RS19345;Dbxref=Genbank:WP_016190076.1;Name=WP_016190076.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: protein motif:HMM:NF018262.2;locus_tag=LU631_RS19345;product=antiterminator Q family protein;protein_id=WP_016190076.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3673435 3674274 . + . ID=gene-LU631_RS19350;Name=LU631_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19350;old_locus_tag=LU631_19350 NZ_CP089940.1 Protein Homology CDS 3673435 3674274 . + 0 ID=cds-WP_016190077.1;Parent=gene-LU631_RS19350;Dbxref=Genbank:WP_016190077.1;Name=WP_016190077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799755.1;locus_tag=LU631_RS19350;product=DUF3289 family protein;protein_id=WP_016190077.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3674271 3674738 . + . ID=gene-LU631_RS19355;Name=LU631_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19355;old_locus_tag=LU631_19355 NZ_CP089940.1 Protein Homology CDS 3674271 3674738 . + 0 ID=cds-WP_016190078.1;Parent=gene-LU631_RS19355;Dbxref=Genbank:WP_016190078.1;Name=WP_016190078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190066.1;locus_tag=LU631_RS19355;product=DUF943 family protein;protein_id=WP_016190078.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3674918 3675493 . + . ID=gene-LU631_RS19360;Name=LU631_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19360;old_locus_tag=LU631_19360 NZ_CP089940.1 GeneMarkS-2+ CDS 3674918 3675493 . + 0 ID=cds-WP_046371963.1;Parent=gene-LU631_RS19360;Dbxref=Genbank:WP_046371963.1;Name=WP_046371963.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19360;product=hypothetical protein;protein_id=WP_046371963.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3675505 3676208 . + . ID=gene-LU631_RS19365;Name=LU631_RS19365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19365;old_locus_tag=LU631_19365;pseudo=true NZ_CP089940.1 Protein Homology CDS 3675505 3676208 . + 0 ID=cds-LU631_RS19365;Parent=gene-LU631_RS19365;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU631_RS19365;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3676814 3677227 . - . ID=gene-LU631_RS19370;Name=LU631_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19370;old_locus_tag=LU631_19370 NZ_CP089940.1 GeneMarkS-2+ CDS 3676814 3677227 . - 0 ID=cds-WP_016190081.1;Parent=gene-LU631_RS19370;Dbxref=Genbank:WP_016190081.1;Name=WP_016190081.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19370;product=hypothetical protein;protein_id=WP_016190081.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3677308 3677556 . + . ID=gene-LU631_RS19375;Name=LU631_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19375;old_locus_tag=LU631_19375 NZ_CP089940.1 GeneMarkS-2+ CDS 3677308 3677556 . + 0 ID=cds-WP_040465308.1;Parent=gene-LU631_RS19375;Dbxref=Genbank:WP_040465308.1;Name=WP_040465308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19375;product=hypothetical protein;protein_id=WP_040465308.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3678432 3678869 . + . ID=gene-LU631_RS19380;Name=LU631_RS19380;end_range=3678869,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19380;old_locus_tag=LU631_19380;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3678432 3678869 . + 0 ID=cds-LU631_RS19380;Parent=gene-LU631_RS19380;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3678869,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001512174.1;locus_tag=LU631_RS19380;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3678975 3680015 . + . ID=gene-LU631_RS19385;Name=LU631_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19385;old_locus_tag=LU631_19385 NZ_CP089940.1 Protein Homology CDS 3678975 3680015 . + 0 ID=cds-WP_046371966.1;Parent=gene-LU631_RS19385;Dbxref=Genbank:WP_046371966.1;Name=WP_046371966.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS19385;product=IS481 family transposase;protein_id=WP_046371966.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3680075 3680305 . + . ID=gene-LU631_RS19390;Name=LU631_RS19390;end_range=3680305,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19390;old_locus_tag=LU631_19390;partial=true;pseudo=true;start_range=.,3680075 NZ_CP089940.1 Protein Homology CDS 3680075 3680305 . + 0 ID=cds-LU631_RS19390;Parent=gene-LU631_RS19390;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3680305,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322911.1;locus_tag=LU631_RS19390;partial=true;product=integrase;pseudo=true;start_range=.,3680075;transl_table=11 NZ_CP089940.1 RefSeq gene 3680336 3681456 . - . ID=gene-LU631_RS19395;Name=LU631_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19395;old_locus_tag=LU631_19395 NZ_CP089940.1 Protein Homology CDS 3681198 3681456 . - 0 ID=cds-WP_152664158.1-2;Parent=gene-LU631_RS19395;Dbxref=Genbank:WP_152664158.1;Name=WP_152664158.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS19395;product=IS3 family transposase;protein_id=WP_152664158.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 3680336 3681198 . - 2 ID=cds-WP_152664158.1-2;Parent=gene-LU631_RS19395;Dbxref=Genbank:WP_152664158.1;Name=WP_152664158.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS19395;product=IS3 family transposase;protein_id=WP_152664158.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3682034 3683243 . + . ID=gene-LU631_RS19400;Name=LU631_RS19400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19400;old_locus_tag=LU631_19400;pseudo=true NZ_CP089940.1 Protein Homology CDS 3682034 3683243 . + 0 ID=cds-LU631_RS19400;Parent=gene-LU631_RS19400;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS19400;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3683512 3684039 . - . ID=gene-LU631_RS19405;Name=LU631_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19405;old_locus_tag=LU631_19405 NZ_CP089940.1 Protein Homology CDS 3683512 3684039 . - 0 ID=cds-WP_016190085.1;Parent=gene-LU631_RS19405;Dbxref=Genbank:WP_016190085.1;Name=WP_016190085.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025354.2;locus_tag=LU631_RS19405;product=DUF4225 domain-containing protein;protein_id=WP_016190085.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3684386 3684868 . + . ID=gene-LU631_RS19410;Name=LU631_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19410;old_locus_tag=LU631_19410 NZ_CP089940.1 Protein Homology CDS 3684386 3684868 . + 0 ID=cds-WP_016190086.1;Parent=gene-LU631_RS19410;Dbxref=Genbank:WP_016190086.1;Name=WP_016190086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369713.1;locus_tag=LU631_RS19410;product=type VI secretion system tube protein Hcp;protein_id=WP_016190086.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3684917 3685375 . + . ID=gene-LU631_RS19415;Name=LU631_RS19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19415;old_locus_tag=LU631_19415 NZ_CP089940.1 GeneMarkS-2+ CDS 3684917 3685375 . + 0 ID=cds-WP_016190087.1;Parent=gene-LU631_RS19415;Dbxref=Genbank:WP_016190087.1;Name=WP_016190087.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19415;product=hypothetical protein;protein_id=WP_016190087.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3685475 3685990 . + . ID=gene-LU631_RS19420;Name=LU631_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19420;old_locus_tag=LU631_19420 NZ_CP089940.1 Protein Homology CDS 3685475 3685990 . + 0 ID=cds-WP_046371967.1;Parent=gene-LU631_RS19420;Dbxref=Genbank:WP_046371967.1;Name=WP_046371967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037406.2;locus_tag=LU631_RS19420;product=hypothetical protein;protein_id=WP_046371967.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3686016 3687224 . - . ID=gene-LU631_RS19425;Name=LU631_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19425;old_locus_tag=LU631_19425 NZ_CP089940.1 Protein Homology CDS 3686016 3687224 . - 0 ID=cds-WP_046371917.1-3;Parent=gene-LU631_RS19425;Dbxref=Genbank:WP_046371917.1;Name=WP_046371917.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS19425;product=IS256 family transposase;protein_id=WP_046371917.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3687522 3688219 . - . ID=gene-LU631_RS19430;Name=LU631_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19430;old_locus_tag=LU631_19430 NZ_CP089940.1 Protein Homology CDS 3687958 3688219 . - 0 ID=cds-WP_233479704.1;Parent=gene-LU631_RS19430;Dbxref=Genbank:WP_233479704.1;Name=WP_233479704.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS19430;product=IS1 family transposase;protein_id=WP_233479704.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 3687522 3687958 . - 2 ID=cds-WP_233479704.1;Parent=gene-LU631_RS19430;Dbxref=Genbank:WP_233479704.1;Name=WP_233479704.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS19430;product=IS1 family transposase;protein_id=WP_233479704.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3688401 3689422 . - . ID=gene-LU631_RS19435;Name=LU631_RS19435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19435;old_locus_tag=LU631_19435;pseudo=true NZ_CP089940.1 Protein Homology CDS 3688401 3689422 . - 0 ID=cds-LU631_RS19435;Parent=gene-LU631_RS19435;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS19435;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3689723 3690682 . + . ID=gene-LU631_RS19440;Name=LU631_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19440;old_locus_tag=LU631_19440 NZ_CP089940.1 Protein Homology CDS 3689723 3690682 . + 0 ID=cds-WP_016190090.1;Parent=gene-LU631_RS19440;Dbxref=Genbank:WP_016190090.1;Name=WP_016190090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509423.1;locus_tag=LU631_RS19440;product=DUF616 domain-containing protein;protein_id=WP_016190090.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3690877 3691915 . + . ID=gene-LU631_RS19445;Name=LU631_RS19445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19445;old_locus_tag=LU631_19445;pseudo=true NZ_CP089940.1 Protein Homology CDS 3690877 3691915 . + 0 ID=cds-LU631_RS19445;Parent=gene-LU631_RS19445;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS19445;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3691971 3692895 . - . ID=gene-LU631_RS19450;Name=LU631_RS19450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19450;old_locus_tag=LU631_19450;partial=true;pseudo=true;start_range=.,3691971 NZ_CP089940.1 Protein Homology CDS 3691971 3692895 . - 0 ID=cds-LU631_RS19450;Parent=gene-LU631_RS19450;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=LU631_RS19450;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,3691971;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3693280 3694277 . + . ID=gene-LU631_RS19455;Name=LU631_RS19455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19455;old_locus_tag=LU631_19455;pseudo=true NZ_CP089940.1 Protein Homology CDS 3693280 3694277 . + 0 ID=cds-LU631_RS19455;Parent=gene-LU631_RS19455;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492245.1;locus_tag=LU631_RS19455;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3694821 3695063 . - . ID=gene-LU631_RS19460;Name=LU631_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19460;old_locus_tag=LU631_19460 NZ_CP089940.1 Protein Homology CDS 3694821 3695063 . - 0 ID=cds-WP_016190098.1;Parent=gene-LU631_RS19460;Dbxref=Genbank:WP_016190098.1;Name=WP_016190098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010259039.1;locus_tag=LU631_RS19460;product=DUF333 domain-containing protein;protein_id=WP_016190098.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3695492 3695827 . + . ID=gene-LU631_RS19465;Name=LU631_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19465;old_locus_tag=LU631_19465 NZ_CP089940.1 GeneMarkS-2+ CDS 3695492 3695827 . + 0 ID=cds-WP_052734695.1-13;Parent=gene-LU631_RS19465;Dbxref=Genbank:WP_052734695.1;Name=WP_052734695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19465;product=hypothetical protein;protein_id=WP_052734695.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3695836 3697050 . + . ID=gene-LU631_RS19470;Name=LU631_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19470;old_locus_tag=LU631_19470 NZ_CP089940.1 Protein Homology CDS 3695836 3697050 . + 0 ID=cds-WP_046371879.1-16;Parent=gene-LU631_RS19470;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS19470;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3697181 3697417 . + . ID=gene-LU631_RS19475;Name=LU631_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19475;old_locus_tag=LU631_19475 NZ_CP089940.1 GeneMarkS-2+ CDS 3697181 3697417 . + 0 ID=cds-WP_233481935.1;Parent=gene-LU631_RS19475;Dbxref=Genbank:WP_233481935.1;Name=WP_233481935.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19475;product=hypothetical protein;protein_id=WP_233481935.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3697526 3697735 . + . ID=gene-LU631_RS19480;Name=LU631_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19480;old_locus_tag=LU631_19480 NZ_CP089940.1 Protein Homology CDS 3697526 3697735 . + 0 ID=cds-WP_016190100.1;Parent=gene-LU631_RS19480;Dbxref=Genbank:WP_016190100.1;Name=WP_016190100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158774.1;locus_tag=LU631_RS19480;product=hypothetical protein;protein_id=WP_016190100.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3697825 3697971 . + . ID=gene-LU631_RS19485;Name=LU631_RS19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19485;old_locus_tag=LU631_19485 NZ_CP089940.1 GeneMarkS-2+ CDS 3697825 3697971 . + 0 ID=cds-WP_157275214.1;Parent=gene-LU631_RS19485;Dbxref=Genbank:WP_157275214.1;Name=WP_157275214.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19485;product=hypothetical protein;protein_id=WP_157275214.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3698091 3699341 . + . ID=gene-LU631_RS19490;Name=LU631_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19490;old_locus_tag=LU631_19490 NZ_CP089940.1 Protein Homology CDS 3698091 3699341 . + 0 ID=cds-WP_016190101.1;Parent=gene-LU631_RS19490;Dbxref=Genbank:WP_016190101.1;Name=WP_016190101.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203252.1;locus_tag=LU631_RS19490;product=mechanosensitive ion channel;protein_id=WP_016190101.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3699381 3699488 . - . ID=gene-LU631_RS19495;Name=LU631_RS19495;end_range=3699488,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19495;old_locus_tag=LU631_19495;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3699381 3699488 . - 0 ID=cds-LU631_RS19495;Parent=gene-LU631_RS19495;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3699488,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203254.1;locus_tag=LU631_RS19495;partial=true;product=SMP-30/gluconolactonase/LRE family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3699531 3699728 . - . ID=gene-LU631_RS19500;Name=LU631_RS19500;end_range=3699728,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19500;old_locus_tag=LU631_19500;partial=true;pseudo=true;start_range=.,3699531 NZ_CP089940.1 Protein Homology CDS 3699531 3699728 . - 0 ID=cds-LU631_RS19500;Parent=gene-LU631_RS19500;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3699728,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611456.1;locus_tag=LU631_RS19500;partial=true;product=transposase;pseudo=true;start_range=.,3699531;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3699852 3700541 . - . ID=gene-LU631_RS19505;Name=LU631_RS19505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19505;old_locus_tag=LU631_19505;partial=true;pseudo=true;start_range=.,3699852 NZ_CP089940.1 Protein Homology CDS 3699852 3700541 . - 0 ID=cds-LU631_RS19505;Parent=gene-LU631_RS19505;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS19505;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,3699852;transl_table=11 NZ_CP089940.1 RefSeq gene 3701634 3702746 . + . ID=gene-LU631_RS19510;Name=LU631_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19510;old_locus_tag=LU631_19510 NZ_CP089940.1 Protein Homology CDS 3701634 3702746 . + 0 ID=cds-WP_016190106.1;Parent=gene-LU631_RS19510;Dbxref=Genbank:WP_016190106.1;Name=WP_016190106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008926537.1;locus_tag=LU631_RS19510;product=DUF1176 domain-containing protein;protein_id=WP_016190106.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3702971 3704971 . - . ID=gene-LU631_RS19515;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=LU631_RS19515;old_locus_tag=LU631_19515 NZ_CP089940.1 Protein Homology CDS 3702971 3704971 . - 0 ID=cds-WP_016190107.1;Parent=gene-LU631_RS19515;Dbxref=Genbank:WP_016190107.1;Name=WP_016190107.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203331.1;locus_tag=LU631_RS19515;product=transketolase;protein_id=WP_016190107.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3705032 3705982 . - . ID=gene-LU631_RS19520;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=LU631_RS19520;old_locus_tag=LU631_19520 NZ_CP089940.1 Protein Homology CDS 3705032 3705982 . - 0 ID=cds-WP_016190108.1;Parent=gene-LU631_RS19520;Dbxref=Genbank:WP_016190108.1;Name=WP_016190108.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358671.1;locus_tag=LU631_RS19520;product=transaldolase;protein_id=WP_016190108.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3706445 3707353 . - . ID=gene-LU631_RS19525;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=LU631_RS19525;old_locus_tag=LU631_19525 NZ_CP089940.1 Protein Homology CDS 3706445 3707353 . - 0 ID=cds-WP_016190109.1;Parent=gene-LU631_RS19525;Dbxref=Genbank:WP_016190109.1;Name=WP_016190109.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158943.1;locus_tag=LU631_RS19525;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_016190109.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3707403 3708240 . - . ID=gene-LU631_RS19530;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=pseudogene;locus_tag=LU631_RS19530;old_locus_tag=LU631_19530;pseudo=true NZ_CP089940.1 Protein Homology CDS 3707403 3708240 . - 0 ID=cds-LU631_RS19530;Parent=gene-LU631_RS19530;Note=frameshifted;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814019.1;locus_tag=LU631_RS19530;product=N-acetylmuramoyl-L-alanine amidase AmiA;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3708456 3708881 . + . ID=gene-LU631_RS19535;Name=LU631_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19535;old_locus_tag=LU631_19535 NZ_CP089940.1 Protein Homology CDS 3708456 3708881 . + 0 ID=cds-WP_016190111.1;Parent=gene-LU631_RS19535;Dbxref=Genbank:WP_016190111.1;Name=WP_016190111.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392525.1;locus_tag=LU631_RS19535;product=GNAT family acetyltransferase;protein_id=WP_016190111.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3708944 3709391 . + . ID=gene-LU631_RS19540;Name=LU631_RS19540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19540;old_locus_tag=LU631_19540;pseudo=true NZ_CP089940.1 Protein Homology CDS 3708944 3709391 . + 0 ID=cds-LU631_RS19540;Parent=gene-LU631_RS19540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848836.1;locus_tag=LU631_RS19540;product=DUF2919 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3709457 3710074 . + . ID=gene-LU631_RS19545;Name=LU631_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19545;old_locus_tag=LU631_19545 NZ_CP089940.1 Protein Homology CDS 3709457 3710074 . + 0 ID=cds-WP_040465311.1;Parent=gene-LU631_RS19545;Dbxref=Genbank:WP_040465311.1;Name=WP_040465311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170467.1;locus_tag=LU631_RS19545;product=RpoE-regulated lipoprotein;protein_id=WP_040465311.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3710273 3711289 . + . ID=gene-LU631_RS19550;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=LU631_RS19550;old_locus_tag=LU631_19550 NZ_CP089940.1 Protein Homology CDS 3710273 3711289 . + 0 ID=cds-WP_016190114.1;Parent=gene-LU631_RS19550;Dbxref=Genbank:WP_016190114.1;Name=WP_016190114.1;Ontology_term=GO:0008272,GO:0015419;gbkey=CDS;gene=cysP;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158931.1;locus_tag=LU631_RS19550;product=thiosulfate ABC transporter substrate-binding protein CysP;protein_id=WP_016190114.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3711289 3712122 . + . ID=gene-LU631_RS19555;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=LU631_RS19555;old_locus_tag=LU631_19555 NZ_CP089940.1 Protein Homology CDS 3711289 3712122 . + 0 ID=cds-WP_016190115.1;Parent=gene-LU631_RS19555;Dbxref=Genbank:WP_016190115.1;Name=WP_016190115.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006317173.1;locus_tag=LU631_RS19555;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_016190115.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3712122 3712970 . + . ID=gene-LU631_RS19560;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=LU631_RS19560;old_locus_tag=LU631_19560 NZ_CP089940.1 Protein Homology CDS 3712122 3712970 . + 0 ID=cds-WP_016190116.1;Parent=gene-LU631_RS19560;Dbxref=Genbank:WP_016190116.1;Name=WP_016190116.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803275.1;locus_tag=LU631_RS19560;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_016190116.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3712985 3714073 . + . ID=gene-LU631_RS19565;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=LU631_RS19565;old_locus_tag=LU631_19565 NZ_CP089940.1 Protein Homology CDS 3712985 3714073 . + 0 ID=cds-WP_016190117.1;Parent=gene-LU631_RS19565;Dbxref=Genbank:WP_016190117.1;Name=WP_016190117.1;Ontology_term=GO:0008272,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081738.1;locus_tag=LU631_RS19565;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_016190117.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3714383 3715261 . + . ID=gene-LU631_RS19570;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=LU631_RS19570;old_locus_tag=LU631_19570 NZ_CP089940.1 Protein Homology CDS 3714383 3715261 . + 0 ID=cds-WP_016190118.1;Parent=gene-LU631_RS19570;Dbxref=Genbank:WP_016190118.1;Name=WP_016190118.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544814.1;locus_tag=LU631_RS19570;product=cysteine synthase CysM;protein_id=WP_016190118.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3715436 3715570 . + . ID=gene-LU631_RS26200;Name=LU631_RS26200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26200 NZ_CP089940.1 GeneMarkS-2+ CDS 3715436 3715570 . + 0 ID=cds-WP_256371762.1;Parent=gene-LU631_RS26200;Dbxref=Genbank:WP_256371762.1;Name=WP_256371762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS26200;product=hypothetical protein;protein_id=WP_256371762.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3715817 3716506 . + . ID=gene-LU631_RS19575;Name=LU631_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19575;old_locus_tag=LU631_19575 NZ_CP089940.1 Protein Homology CDS 3715817 3716506 . + 0 ID=cds-WP_040465312.1;Parent=gene-LU631_RS19575;Dbxref=Genbank:WP_040465312.1;Name=WP_040465312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017798997.1;locus_tag=LU631_RS19575;product=GntR family transcriptional regulator;protein_id=WP_040465312.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3716677 3717089 . + . ID=gene-LU631_RS19580;Name=LU631_RS19580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19580;old_locus_tag=LU631_19580;partial=true;pseudo=true;start_range=.,3716677 NZ_CP089940.1 Protein Homology CDS 3716677 3717089 . + 0 ID=cds-LU631_RS19580;Parent=gene-LU631_RS19580;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011073373.1;locus_tag=LU631_RS19580;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,3716677;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3717155 3718205 . - . ID=gene-LU631_RS19585;Name=LU631_RS19585;end_range=3718205,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19585;old_locus_tag=LU631_19585;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3717155 3718205 . - 0 ID=cds-LU631_RS19585;Parent=gene-LU631_RS19585;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=3718205,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU631_RS19585;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3718401 3719396 . + . ID=gene-LU631_RS19590;Name=LU631_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19590;old_locus_tag=LU631_19590 NZ_CP089940.1 Protein Homology CDS 3718401 3719396 . + 0 ID=cds-WP_016190124.1;Parent=gene-LU631_RS19590;Dbxref=Genbank:WP_016190124.1;Name=WP_016190124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509986.1;locus_tag=LU631_RS19590;product=bile acid:sodium symporter;protein_id=WP_016190124.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3719529 3720567 . - . ID=gene-LU631_RS19595;Name=LU631_RS19595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19595;old_locus_tag=LU631_19595;pseudo=true NZ_CP089940.1 Protein Homology CDS 3719529 3720567 . - 0 ID=cds-LU631_RS19595;Parent=gene-LU631_RS19595;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS19595;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3720704 3720924 . - . ID=gene-LU631_RS19600;Name=LU631_RS19600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19600;old_locus_tag=LU631_19600;pseudo=true NZ_CP089940.1 Protein Homology CDS 3720704 3720924 . - 0 ID=cds-LU631_RS19600;Parent=gene-LU631_RS19600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013026636.1;locus_tag=LU631_RS19600;product=DUF3820 family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3720926 3722944 . - . ID=gene-LU631_RS19605;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=LU631_RS19605;old_locus_tag=LU631_19605 NZ_CP089940.1 Protein Homology CDS 3720926 3722944 . - 0 ID=cds-WP_016190128.1;Parent=gene-LU631_RS19605;Dbxref=Genbank:WP_016190128.1;Name=WP_016190128.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544807.1;locus_tag=LU631_RS19605;product=NAD-dependent DNA ligase LigA;protein_id=WP_016190128.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3723022 3723942 . - . ID=gene-LU631_RS19610;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=LU631_RS19610;old_locus_tag=LU631_19610 NZ_CP089940.1 Protein Homology CDS 3723022 3723942 . - 0 ID=cds-WP_016190129.1;Parent=gene-LU631_RS19610;Dbxref=Genbank:WP_016190129.1;Name=WP_016190129.1;Ontology_term=GO:0000917,GO:0005515;gbkey=CDS;gene=zipA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358655.1;locus_tag=LU631_RS19610;product=cell division protein ZipA;protein_id=WP_016190129.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3724159 3724920 . + . ID=gene-LU631_RS19615;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=LU631_RS19615;old_locus_tag=LU631_19615 NZ_CP089940.1 Protein Homology CDS 3724159 3724920 . + 0 ID=cds-WP_016190130.1;Parent=gene-LU631_RS19615;Dbxref=Genbank:WP_016190130.1;Name=WP_016190130.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117797.1;locus_tag=LU631_RS19615;product=sulfate transporter CysZ;protein_id=WP_016190130.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3725049 3726020 . + . ID=gene-LU631_RS19620;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=LU631_RS19620;old_locus_tag=LU631_19620 NZ_CP089940.1 Protein Homology CDS 3725049 3726020 . + 0 ID=cds-WP_016190131.1;Parent=gene-LU631_RS19620;Dbxref=Genbank:WP_016190131.1;Name=WP_016190131.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=LU631_RS19620;product=cysteine synthase A;protein_id=WP_016190131.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3726412 3726669 . + . ID=gene-LU631_RS19625;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=LU631_RS19625;old_locus_tag=LU631_19625 NZ_CP089940.1 Protein Homology CDS 3726412 3726669 . + 0 ID=cds-WP_016190132.1;Parent=gene-LU631_RS19625;Dbxref=Genbank:WP_016190132.1;Name=WP_016190132.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=LU631_RS19625;product=phosphocarrier protein Hpr;protein_id=WP_016190132.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3726887 3728614 . + . ID=gene-LU631_RS19630;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=LU631_RS19630;old_locus_tag=LU631_19630 NZ_CP089940.1 Protein Homology CDS 3726887 3728614 . + 0 ID=cds-WP_016190133.1;Parent=gene-LU631_RS19630;Dbxref=Genbank:WP_016190133.1;Name=WP_016190133.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=LU631_RS19630;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_016190133.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3728658 3729161 . + . ID=gene-LU631_RS19635;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=LU631_RS19635;old_locus_tag=LU631_19635 NZ_CP089940.1 Protein Homology CDS 3728658 3729161 . + 0 ID=cds-WP_016190134.1;Parent=gene-LU631_RS19635;Dbxref=Genbank:WP_016190134.1;Name=WP_016190134.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441232.1;locus_tag=LU631_RS19635;product=PTS glucose transporter subunit IIA;protein_id=WP_016190134.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3729272 3730480 . + . ID=gene-LU631_RS19640;Name=LU631_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19640;old_locus_tag=LU631_19640 NZ_CP089940.1 Protein Homology CDS 3729272 3730480 . + 0 ID=cds-WP_046371917.1-4;Parent=gene-LU631_RS19640;Dbxref=Genbank:WP_046371917.1;Name=WP_046371917.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS19640;product=IS256 family transposase;protein_id=WP_046371917.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3730550 3730858 . - . ID=gene-LU631_RS19645;Name=LU631_RS19645;end_range=3730858,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19645;old_locus_tag=LU631_19645;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3730550 3730858 . - 0 ID=cds-LU631_RS19645;Parent=gene-LU631_RS19645;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3730858,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS19645;partial=true;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3731132 3732138 . - . ID=gene-LU631_RS19650;Name=LU631_RS19650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19650;old_locus_tag=LU631_19650;pseudo=true NZ_CP089940.1 Protein Homology CDS 3731132 3732138 . - 0 ID=cds-LU631_RS19650;Parent=gene-LU631_RS19650;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000878026.1;locus_tag=LU631_RS19650;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3732287 3732997 . - . ID=gene-LU631_RS19655;Name=LU631_RS19655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19655;old_locus_tag=LU631_19655;partial=true;pseudo=true;start_range=.,3732287 NZ_CP089940.1 Protein Homology CDS 3732287 3732997 . - 0 ID=cds-LU631_RS19655;Parent=gene-LU631_RS19655;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS19655;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,3732287;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3733073 3733876 . + . ID=gene-LU631_RS19660;Name=LU631_RS19660;end_range=3733876,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19660;old_locus_tag=LU631_19660;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3733073 3733876 . + 0 ID=cds-LU631_RS19660;Parent=gene-LU631_RS19660;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3733876,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015699782.1;locus_tag=LU631_RS19660;partial=true;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3733923 3734114 . - . ID=gene-LU631_RS19665;Name=LU631_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19665;old_locus_tag=LU631_19665 NZ_CP089940.1 Protein Homology CDS 3733923 3734114 . - 0 ID=cds-WP_232426829.1;Parent=gene-LU631_RS19665;Dbxref=Genbank:WP_232426829.1;Name=WP_232426829.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025640.2;locus_tag=LU631_RS19665;product=hypothetical protein;protein_id=WP_232426829.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3734129 3734251 . - . ID=gene-LU631_RS19670;Name=LU631_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19670;old_locus_tag=LU631_19670 NZ_CP089940.1 Protein Homology CDS 3734129 3734251 . - 0 ID=cds-WP_232426810.1;Parent=gene-LU631_RS19670;Dbxref=Genbank:WP_232426810.1;Name=WP_232426810.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025640.2;locus_tag=LU631_RS19670;product=FlxA-like family protein;protein_id=WP_232426810.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3734552 3734627 . - . ID=gene-LU631_RS19675;Name=LU631_RS19675;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS19675;old_locus_tag=LU631_19675 NZ_CP089940.1 tRNAscan-SE tRNA 3734552 3734627 . - . ID=rna-LU631_RS19675;Parent=gene-LU631_RS19675;anticodon=(pos:complement(3734592..3734594));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS19675;product=tRNA-Lys NZ_CP089940.1 tRNAscan-SE exon 3734552 3734627 . - . ID=exon-LU631_RS19675-1;Parent=rna-LU631_RS19675;anticodon=(pos:complement(3734592..3734594));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS19675;product=tRNA-Lys NZ_CP089940.1 RefSeq gene 3734632 3734707 . - . ID=gene-LU631_RS19680;Name=LU631_RS19680;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS19680;old_locus_tag=LU631_19680 NZ_CP089940.1 tRNAscan-SE tRNA 3734632 3734707 . - . ID=rna-LU631_RS19680;Parent=gene-LU631_RS19680;anticodon=(pos:complement(3734672..3734674));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS19680;product=tRNA-Val NZ_CP089940.1 tRNAscan-SE exon 3734632 3734707 . - . ID=exon-LU631_RS19680-1;Parent=rna-LU631_RS19680;anticodon=(pos:complement(3734672..3734674));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS19680;product=tRNA-Val NZ_CP089940.1 RefSeq gene 3734748 3734823 . - . ID=gene-LU631_RS19685;Name=LU631_RS19685;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS19685;old_locus_tag=LU631_19685 NZ_CP089940.1 tRNAscan-SE tRNA 3734748 3734823 . - . ID=rna-LU631_RS19685;Parent=gene-LU631_RS19685;anticodon=(pos:complement(3734788..3734790));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS19685;product=tRNA-Val NZ_CP089940.1 tRNAscan-SE exon 3734748 3734823 . - . ID=exon-LU631_RS19685-1;Parent=rna-LU631_RS19685;anticodon=(pos:complement(3734788..3734790));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS19685;product=tRNA-Val NZ_CP089940.1 RefSeq gene 3734873 3734948 . - . ID=gene-LU631_RS19690;Name=LU631_RS19690;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS19690;old_locus_tag=LU631_19690 NZ_CP089940.1 tRNAscan-SE tRNA 3734873 3734948 . - . ID=rna-LU631_RS19690;Parent=gene-LU631_RS19690;anticodon=(pos:complement(3734913..3734915));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS19690;product=tRNA-Val NZ_CP089940.1 tRNAscan-SE exon 3734873 3734948 . - . ID=exon-LU631_RS19690-1;Parent=rna-LU631_RS19690;anticodon=(pos:complement(3734913..3734915));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS19690;product=tRNA-Val NZ_CP089940.1 RefSeq gene 3735221 3736633 . + . ID=gene-LU631_RS19695;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=LU631_RS19695;old_locus_tag=LU631_19695 NZ_CP089940.1 Protein Homology CDS 3735221 3736633 . + 0 ID=cds-WP_016190137.1;Parent=gene-LU631_RS19695;Dbxref=Genbank:WP_016190137.1;Name=WP_016190137.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017345327.1;locus_tag=LU631_RS19695;product=glutamate--tRNA ligase;protein_id=WP_016190137.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3736924 3737925 . - . ID=gene-LU631_RS19700;Name=LU631_RS19700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19700;old_locus_tag=LU631_19700;pseudo=true NZ_CP089940.1 Protein Homology CDS 3736924 3737925 . - 0 ID=cds-LU631_RS19700;Parent=gene-LU631_RS19700;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315785.1;locus_tag=LU631_RS19700;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3738860 3739219 . - . ID=gene-LU631_RS19705;Name=LU631_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19705;old_locus_tag=LU631_19705 NZ_CP089940.1 Protein Homology CDS 3738860 3739219 . - 0 ID=cds-WP_016190138.1;Parent=gene-LU631_RS19705;Dbxref=Genbank:WP_016190138.1;Name=WP_016190138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509982.1;locus_tag=LU631_RS19705;product=putative DNA-binding transcriptional regulator;protein_id=WP_016190138.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3739359 3740147 . - . ID=gene-LU631_RS19710;Name=LU631_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19710;old_locus_tag=LU631_19710 NZ_CP089940.1 Protein Homology CDS 3739359 3740147 . - 0 ID=cds-WP_016190139.1;Parent=gene-LU631_RS19710;Dbxref=Genbank:WP_016190139.1;Name=WP_016190139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509981.1;locus_tag=LU631_RS19710;product=formate/nitrite transporter family protein;protein_id=WP_016190139.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3740568 3740643 . + . ID=gene-LU631_RS19715;Name=LU631_RS19715;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS19715;old_locus_tag=LU631_19715 NZ_CP089940.1 tRNAscan-SE tRNA 3740568 3740643 . + . ID=rna-LU631_RS19715;Parent=gene-LU631_RS19715;anticodon=(pos:3740601..3740603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS19715;product=tRNA-Ala NZ_CP089940.1 tRNAscan-SE exon 3740568 3740643 . + . ID=exon-LU631_RS19715-1;Parent=rna-LU631_RS19715;anticodon=(pos:3740601..3740603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS19715;product=tRNA-Ala NZ_CP089940.1 RefSeq gene 3740688 3740763 . + . ID=gene-LU631_RS19720;Name=LU631_RS19720;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS19720;old_locus_tag=LU631_19720 NZ_CP089940.1 tRNAscan-SE tRNA 3740688 3740763 . + . ID=rna-LU631_RS19720;Parent=gene-LU631_RS19720;anticodon=(pos:3740721..3740723);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS19720;product=tRNA-Ala NZ_CP089940.1 tRNAscan-SE exon 3740688 3740763 . + . ID=exon-LU631_RS19720-1;Parent=rna-LU631_RS19720;anticodon=(pos:3740721..3740723);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS19720;product=tRNA-Ala NZ_CP089940.1 RefSeq gene 3740897 3742081 . - . ID=gene-LU631_RS19725;Name=LU631_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19725;old_locus_tag=LU631_19725 NZ_CP089940.1 Protein Homology CDS 3740897 3742081 . - 0 ID=cds-WP_016190140.1;Parent=gene-LU631_RS19725;Dbxref=Genbank:WP_016190140.1;Name=WP_016190140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376337.1;locus_tag=LU631_RS19725;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_016190140.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3742246 3743569 . + . ID=gene-LU631_RS19730;Name=LU631_RS19730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19730;old_locus_tag=LU631_19730;pseudo=true NZ_CP089940.1 Protein Homology CDS 3742246 3743569 . + 0 ID=cds-LU631_RS19730;Parent=gene-LU631_RS19730;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS19730;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3743866 3745098 . + . ID=gene-LU631_RS19735;Name=LU631_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19735;old_locus_tag=LU631_19735 NZ_CP089940.1 Protein Homology CDS 3743866 3745098 . + 0 ID=cds-WP_016190141.1;Parent=gene-LU631_RS19735;Dbxref=Genbank:WP_016190141.1;Name=WP_016190141.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013026627.1;locus_tag=LU631_RS19735;product=Nramp family divalent metal transporter;protein_id=WP_016190141.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3745136 3745378 . + . ID=gene-LU631_RS19740;Name=LU631_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19740;old_locus_tag=LU631_19740 NZ_CP089940.1 GeneMarkS-2+ CDS 3745136 3745378 . + 0 ID=cds-WP_232426811.1;Parent=gene-LU631_RS19740;Dbxref=Genbank:WP_232426811.1;Name=WP_232426811.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19740;product=hypothetical protein;protein_id=WP_232426811.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3745347 3745493 . - . ID=gene-LU631_RS19745;Name=LU631_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19745;old_locus_tag=LU631_19745 NZ_CP089940.1 GeneMarkS-2+ CDS 3745347 3745493 . - 0 ID=cds-WP_016190142.1;Parent=gene-LU631_RS19745;Dbxref=Genbank:WP_016190142.1;Name=WP_016190142.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19745;product=hypothetical protein;protein_id=WP_016190142.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3745649 3746636 . - . ID=gene-LU631_RS19750;Name=LU631_RS19750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19750;old_locus_tag=LU631_19750;pseudo=true NZ_CP089940.1 Protein Homology CDS 3745649 3746636 . - 0 ID=cds-LU631_RS19750;Parent=gene-LU631_RS19750;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004173063.1;locus_tag=LU631_RS19750;product=aldo/keto reductase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3746731 3747851 . - . ID=gene-LU631_RS19755;Name=LU631_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19755;old_locus_tag=LU631_19755 NZ_CP089940.1 Protein Homology CDS 3747593 3747851 . - 0 ID=cds-WP_152664158.1-3;Parent=gene-LU631_RS19755;Dbxref=Genbank:WP_152664158.1;Name=WP_152664158.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS19755;product=IS3 family transposase;protein_id=WP_152664158.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 3746731 3747593 . - 2 ID=cds-WP_152664158.1-3;Parent=gene-LU631_RS19755;Dbxref=Genbank:WP_152664158.1;Name=WP_152664158.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS19755;product=IS3 family transposase;protein_id=WP_152664158.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3747925 3748233 . + . ID=gene-LU631_RS19760;Name=LU631_RS19760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19760;old_locus_tag=LU631_19760;partial=true;pseudo=true;start_range=.,3747925 NZ_CP089940.1 Protein Homology CDS 3747925 3748233 . + 0 ID=cds-LU631_RS19760;Parent=gene-LU631_RS19760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU631_RS19760;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,3747925;transl_table=11 NZ_CP089940.1 RefSeq gene 3748357 3748767 . - . ID=gene-LU631_RS19765;Name=LU631_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19765;old_locus_tag=LU631_19765 NZ_CP089940.1 GeneMarkS-2+ CDS 3748357 3748767 . - 0 ID=cds-WP_040465314.1;Parent=gene-LU631_RS19765;Dbxref=Genbank:WP_040465314.1;Name=WP_040465314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19765;product=hypothetical protein;protein_id=WP_040465314.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3748777 3749151 . - . ID=gene-LU631_RS19770;Name=LU631_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19770;old_locus_tag=LU631_19770 NZ_CP089940.1 GeneMarkS-2+ CDS 3748777 3749151 . - 0 ID=cds-WP_016190145.1;Parent=gene-LU631_RS19770;Dbxref=Genbank:WP_016190145.1;Name=WP_016190145.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19770;product=hypothetical protein;protein_id=WP_016190145.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3749450 3750730 . - . ID=gene-LU631_RS19775;Name=LU631_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19775;old_locus_tag=LU631_19775 NZ_CP089940.1 Protein Homology CDS 3749450 3750730 . - 0 ID=cds-WP_016190146.1;Parent=gene-LU631_RS19775;Dbxref=Genbank:WP_016190146.1;Name=WP_016190146.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114124.1;locus_tag=LU631_RS19775;product=site-specific integrase;protein_id=WP_016190146.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3750964 3753525 . + . ID=gene-LU631_RS19780;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=LU631_RS19780;old_locus_tag=LU631_19780 NZ_CP089940.1 Protein Homology CDS 3750964 3753525 . + 0 ID=cds-WP_016190147.1;Parent=gene-LU631_RS19780;Dbxref=Genbank:WP_016190147.1;Name=WP_016190147.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442398.1;locus_tag=LU631_RS19780;product=DNA mismatch repair protein MutS;protein_id=WP_016190147.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3754774 3754914 . + . ID=gene-LU631_RS19785;Name=LU631_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19785;old_locus_tag=LU631_19785 NZ_CP089940.1 GeneMarkS-2+ CDS 3754774 3754914 . + 0 ID=cds-WP_161796965.1-17;Parent=gene-LU631_RS19785;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19785;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3754923 3756137 . + . ID=gene-LU631_RS19790;Name=LU631_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19790;old_locus_tag=LU631_19790 NZ_CP089940.1 Protein Homology CDS 3754923 3756137 . + 0 ID=cds-WP_046371879.1-17;Parent=gene-LU631_RS19790;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS19790;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3756306 3757301 . - . ID=gene-LU631_RS19795;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=LU631_RS19795;old_locus_tag=LU631_19795 NZ_CP089940.1 Protein Homology CDS 3756306 3757301 . - 0 ID=cds-WP_016190148.1;Parent=gene-LU631_RS19795;Dbxref=Genbank:WP_016190148.1;Name=WP_016190148.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=LU631_RS19795;product=RNA polymerase sigma factor RpoS;protein_id=WP_016190148.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3757352 3758467 . - . ID=gene-LU631_RS19800;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=LU631_RS19800;old_locus_tag=LU631_19800 NZ_CP089940.1 Protein Homology CDS 3757352 3758467 . - 0 ID=cds-WP_016190149.1;Parent=gene-LU631_RS19800;Dbxref=Genbank:WP_016190149.1;Name=WP_016190149.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019104718.1;locus_tag=LU631_RS19800;product=murein hydrolase activator NlpD;protein_id=WP_016190149.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3758611 3759237 . - . ID=gene-LU631_RS19805;Name=LU631_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19805;old_locus_tag=LU631_19805 NZ_CP089940.1 Protein Homology CDS 3758611 3759237 . - 0 ID=cds-WP_016190150.1;Parent=gene-LU631_RS19805;Dbxref=Genbank:WP_016190150.1;Name=WP_016190150.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461847.1;locus_tag=LU631_RS19805;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_016190150.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3759231 3759992 . - . ID=gene-LU631_RS19810;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=LU631_RS19810;old_locus_tag=LU631_19810 NZ_CP089940.1 Protein Homology CDS 3759231 3759992 . - 0 ID=cds-WP_016190151.1;Parent=gene-LU631_RS19810;Dbxref=Genbank:WP_016190151.1;Name=WP_016190151.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442402.1;locus_tag=LU631_RS19810;product=5'/3'-nucleotidase SurE;protein_id=WP_016190151.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3760509 3761558 . - . ID=gene-LU631_RS19815;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=LU631_RS19815;old_locus_tag=LU631_19815 NZ_CP089940.1 Protein Homology CDS 3760509 3761558 . - 0 ID=cds-WP_016190152.1;Parent=gene-LU631_RS19815;Dbxref=Genbank:WP_016190152.1;Name=WP_016190152.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015670984.1;locus_tag=LU631_RS19815;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_016190152.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3761558 3762037 . - . ID=gene-LU631_RS19820;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=LU631_RS19820;old_locus_tag=LU631_19820 NZ_CP089940.1 Protein Homology CDS 3761558 3762037 . - 0 ID=cds-WP_016190153.1;Parent=gene-LU631_RS19820;Dbxref=Genbank:WP_016190153.1;Name=WP_016190153.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803637.1;locus_tag=LU631_RS19820;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_016190153.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3762037 3762753 . - . ID=gene-LU631_RS19825;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=LU631_RS19825;old_locus_tag=LU631_19825 NZ_CP089940.1 Protein Homology CDS 3762037 3762753 . - 0 ID=cds-WP_016190154.1;Parent=gene-LU631_RS19825;Dbxref=Genbank:WP_016190154.1;Name=WP_016190154.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004955222.1;locus_tag=LU631_RS19825;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_016190154.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3762757 3763077 . - . ID=gene-LU631_RS19830;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=LU631_RS19830;old_locus_tag=LU631_19830 NZ_CP089940.1 Protein Homology CDS 3762757 3763077 . - 0 ID=cds-WP_016190155.1;Parent=gene-LU631_RS19830;Dbxref=Genbank:WP_016190155.1;Name=WP_016190155.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849108.1;locus_tag=LU631_RS19830;product=cell division protein FtsB;protein_id=WP_016190155.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3763266 3763586 . - . ID=gene-LU631_RS19835;Name=LU631_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19835;old_locus_tag=LU631_19835 NZ_CP089940.1 Protein Homology CDS 3763266 3763586 . - 0 ID=cds-WP_016190156.1;Parent=gene-LU631_RS19835;Dbxref=Genbank:WP_016190156.1;Name=WP_016190156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155824.1;locus_tag=LU631_RS19835;product=DUF3561 family protein;protein_id=WP_016190156.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3763642 3764247 . - . ID=gene-LU631_RS19840;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=LU631_RS19840;old_locus_tag=LU631_19840 NZ_CP089940.1 Protein Homology CDS 3763642 3764247 . - 0 ID=cds-WP_016190157.1;Parent=gene-LU631_RS19840;Dbxref=Genbank:WP_016190157.1;Name=WP_016190157.1;Ontology_term=GO:0006790,GO:0004020;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228487.1;locus_tag=LU631_RS19840;product=adenylyl-sulfate kinase;protein_id=WP_016190157.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3764247 3765674 . - . ID=gene-LU631_RS19845;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=LU631_RS19845;old_locus_tag=LU631_19845 NZ_CP089940.1 Protein Homology CDS 3764247 3765674 . - 0 ID=cds-WP_016190158.1;Parent=gene-LU631_RS19845;Dbxref=Genbank:WP_016190158.1;Name=WP_016190158.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007893233.1;locus_tag=LU631_RS19845;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_016190158.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3765684 3766592 . - . ID=gene-LU631_RS19850;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=LU631_RS19850;old_locus_tag=LU631_19850 NZ_CP089940.1 Protein Homology CDS 3765684 3766592 . - 0 ID=cds-WP_016190159.1;Parent=gene-LU631_RS19850;Dbxref=Genbank:WP_016190159.1;Name=WP_016190159.1;Ontology_term=GO:0019419,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate reduction|0019419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=LU631_RS19850;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_016190159.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3766602 3768017 . - . ID=gene-LU631_RS19855;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=LU631_RS19855;old_locus_tag=LU631_19855 NZ_CP089940.1 Protein Homology CDS 3766602 3768017 . - 0 ID=cds-WP_016190160.1;Parent=gene-LU631_RS19855;Dbxref=Genbank:WP_016190160.1;Name=WP_016190160.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019104720.1;locus_tag=LU631_RS19855;product=siroheme synthase CysG;protein_id=WP_016190160.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3768343 3768585 . + . ID=gene-LU631_RS19860;Name=LU631_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19860;old_locus_tag=LU631_19860 NZ_CP089940.1 Protein Homology CDS 3768343 3768585 . + 0 ID=cds-WP_016190161.1;Parent=gene-LU631_RS19860;Dbxref=Genbank:WP_016190161.1;Name=WP_016190161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669066.1;locus_tag=LU631_RS19860;product=YciI family protein;protein_id=WP_016190161.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3769021 3769752 . - . ID=gene-LU631_RS19865;Name=LU631_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19865;old_locus_tag=LU631_19865 NZ_CP089940.1 Protein Homology CDS 3769021 3769752 . - 0 ID=cds-WP_016190163.1;Parent=gene-LU631_RS19865;Dbxref=Genbank:WP_016190163.1;Name=WP_016190163.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203552.1;locus_tag=LU631_RS19865;product=phosphoadenylyl-sulfate reductase;protein_id=WP_016190163.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3769765 3771480 . - . ID=gene-LU631_RS19870;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=LU631_RS19870;old_locus_tag=LU631_19870 NZ_CP089940.1 Protein Homology CDS 3769765 3771480 . - 0 ID=cds-WP_016190164.1;Parent=gene-LU631_RS19870;Dbxref=Genbank:WP_016190164.1;Name=WP_016190164.1;Ontology_term=GO:0000103,GO:0004783;gbkey=CDS;gene=cysI;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543446.1;locus_tag=LU631_RS19870;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_016190164.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3771480 3773273 . - . ID=gene-LU631_RS19875;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=LU631_RS19875;old_locus_tag=LU631_19875 NZ_CP089940.1 Protein Homology CDS 3771480 3773273 . - 0 ID=cds-WP_016190165.1;Parent=gene-LU631_RS19875;Dbxref=Genbank:WP_016190165.1;Name=WP_016190165.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669069.1;locus_tag=LU631_RS19875;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_016190165.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3773579 3773941 . + . ID=gene-LU631_RS19880;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=LU631_RS19880;old_locus_tag=LU631_19880 NZ_CP089940.1 Protein Homology CDS 3773579 3773941 . + 0 ID=cds-WP_016190166.1;Parent=gene-LU631_RS19880;Dbxref=Genbank:WP_016190166.1;Name=WP_016190166.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=LU631_RS19880;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_016190166.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3773958 3774629 . - . ID=gene-LU631_RS19885;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=LU631_RS19885;old_locus_tag=LU631_19885 NZ_CP089940.1 Protein Homology CDS 3773958 3774629 . - 0 ID=cds-WP_016190167.1;Parent=gene-LU631_RS19885;Dbxref=Genbank:WP_016190167.1;Name=WP_016190167.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442421.1;locus_tag=LU631_RS19885;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_016190167.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3774745 3775422 . - . ID=gene-LU631_RS19890;Name=LU631_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19890;old_locus_tag=LU631_19890 NZ_CP089940.1 Protein Homology CDS 3774745 3775422 . - 0 ID=cds-WP_232426812.1;Parent=gene-LU631_RS19890;Dbxref=Genbank:WP_232426812.1;Name=WP_232426812.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039218.1;locus_tag=LU631_RS19890;product=SGNH hydrolase domain-containing protein;protein_id=WP_232426812.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3775473 3776585 . - . ID=gene-LU631_RS19895;Name=LU631_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19895;old_locus_tag=LU631_19895 NZ_CP089940.1 Protein Homology CDS 3775473 3776585 . - 0 ID=cds-WP_232426813.1;Parent=gene-LU631_RS19895;Dbxref=Genbank:WP_232426813.1;Name=WP_232426813.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013884.2;locus_tag=LU631_RS19895;product=acyltransferase;protein_id=WP_232426813.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3776819 3778114 . - . ID=gene-LU631_RS19900;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=LU631_RS19900;old_locus_tag=LU631_19900 NZ_CP089940.1 Protein Homology CDS 3776819 3778114 . - 0 ID=cds-WP_016190168.1;Parent=gene-LU631_RS19900;Dbxref=Genbank:WP_016190168.1;Name=WP_016190168.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005243.1;locus_tag=LU631_RS19900;product=phosphopyruvate hydratase;protein_id=WP_016190168.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3778191 3779828 . - . ID=gene-LU631_RS19905;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=LU631_RS19905;old_locus_tag=LU631_19905 NZ_CP089940.1 Protein Homology CDS 3778191 3779828 . - 0 ID=cds-WP_016190169.1;Parent=gene-LU631_RS19905;Dbxref=Genbank:WP_016190169.1;Name=WP_016190169.1;Ontology_term=GO:0009220,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=LU631_RS19905;product=CTP synthase (glutamine hydrolyzing);protein_id=WP_016190169.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3780040 3780822 . - . ID=gene-LU631_RS19910;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=LU631_RS19910;old_locus_tag=LU631_19910 NZ_CP089940.1 Protein Homology CDS 3780040 3780822 . - 0 ID=cds-WP_016190170.1;Parent=gene-LU631_RS19910;Dbxref=Genbank:WP_016190170.1;Name=WP_016190170.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203561.1;locus_tag=LU631_RS19910;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_016190170.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3781024 3783252 . - . ID=gene-LU631_RS19915;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=LU631_RS19915;old_locus_tag=LU631_19915 NZ_CP089940.1 Protein Homology CDS 3781024 3783252 . - 0 ID=cds-WP_016190172.1;Parent=gene-LU631_RS19915;Dbxref=Genbank:WP_016190172.1;Name=WP_016190172.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854613.1;locus_tag=LU631_RS19915;product=GTP diphosphokinase;protein_id=WP_016190172.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3783266 3784247 . - . ID=gene-LU631_RS19920;Name=rlmD;end_range=3784247,.;gbkey=Gene;gene=rlmD;gene_biotype=pseudogene;locus_tag=LU631_RS19920;old_locus_tag=LU631_19920;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3783266 3784247 . - 0 ID=cds-LU631_RS19920;Parent=gene-LU631_RS19920;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008649;end_range=3784247,.;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543437.1;locus_tag=LU631_RS19920;partial=true;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3784262 3785585 . - . ID=gene-LU631_RS19925;Name=LU631_RS19925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19925;old_locus_tag=LU631_19925;pseudo=true NZ_CP089940.1 Protein Homology CDS 3784262 3785585 . - 0 ID=cds-LU631_RS19925;Parent=gene-LU631_RS19925;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS19925;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3785681 3786031 . - . ID=gene-LU631_RS19930;Name=LU631_RS19930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19930;old_locus_tag=LU631_19930;partial=true;pseudo=true;start_range=.,3785681 NZ_CP089940.1 Protein Homology CDS 3785681 3786031 . - 0 ID=cds-LU631_RS19930;Parent=gene-LU631_RS19930;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543437.1;locus_tag=LU631_RS19930;partial=true;product=TRAM domain-containing protein;pseudo=true;start_range=.,3785681;transl_table=11 NZ_CP089940.1 RefSeq gene 3786144 3788870 . + . ID=gene-LU631_RS19935;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=LU631_RS19935;old_locus_tag=LU631_19935 NZ_CP089940.1 Protein Homology CDS 3786144 3788870 . + 0 ID=cds-WP_016190174.1;Parent=gene-LU631_RS19935;Dbxref=Genbank:WP_016190174.1;Name=WP_016190174.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172070.1;locus_tag=LU631_RS19935;product=two-component sensor histidine kinase BarA;protein_id=WP_016190174.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3788913 3790058 . - . ID=gene-LU631_RS19940;Name=LU631_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19940;old_locus_tag=LU631_19940 NZ_CP089940.1 Protein Homology CDS 3788913 3790058 . - 0 ID=cds-WP_016190175.1;Parent=gene-LU631_RS19940;Dbxref=Genbank:WP_016190175.1;Name=WP_016190175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382830.1;locus_tag=LU631_RS19940;product=glycerate kinase;protein_id=WP_016190175.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3790129 3791013 . - . ID=gene-LU631_RS19945;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=LU631_RS19945;old_locus_tag=LU631_19945 NZ_CP089940.1 Protein Homology CDS 3790129 3791013 . - 0 ID=cds-WP_016190176.1;Parent=gene-LU631_RS19945;Dbxref=Genbank:WP_016190176.1;Name=WP_016190176.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417594.3;locus_tag=LU631_RS19945;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_016190176.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3791036 3791806 . - . ID=gene-LU631_RS19950;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=LU631_RS19950;old_locus_tag=LU631_19950 NZ_CP089940.1 Protein Homology CDS 3791036 3791806 . - 0 ID=cds-WP_016190177.1;Parent=gene-LU631_RS19950;Dbxref=Genbank:WP_016190177.1;Name=WP_016190177.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706972.1;locus_tag=LU631_RS19950;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_016190177.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3791824 3793164 . - . ID=gene-LU631_RS19955;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=LU631_RS19955;old_locus_tag=LU631_19955 NZ_CP089940.1 Protein Homology CDS 3791824 3793164 . - 0 ID=cds-WP_016190178.1;Parent=gene-LU631_RS19955;Dbxref=Genbank:WP_016190178.1;Name=WP_016190178.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833097.1;locus_tag=LU631_RS19955;product=glucarate dehydratase;protein_id=WP_016190178.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3793192 3794529 . - . ID=gene-LU631_RS19960;Name=LU631_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19960;old_locus_tag=LU631_19960 NZ_CP089940.1 Protein Homology CDS 3793192 3794529 . - 0 ID=cds-WP_040465316.1;Parent=gene-LU631_RS19960;Dbxref=Genbank:WP_040465316.1;Name=WP_040465316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803607.1;locus_tag=LU631_RS19960;product=glucarate dehydratase family protein;protein_id=WP_040465316.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3794540 3795883 . - . ID=gene-LU631_RS19965;Name=LU631_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19965;old_locus_tag=LU631_19965 NZ_CP089940.1 Protein Homology CDS 3794540 3795883 . - 0 ID=cds-WP_016190181.1;Parent=gene-LU631_RS19965;Dbxref=Genbank:WP_016190181.1;Name=WP_016190181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203570.1;locus_tag=LU631_RS19965;product=MFS transporter;protein_id=WP_016190181.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3796390 3796845 . + . ID=gene-LU631_RS19970;Name=LU631_RS19970;end_range=3796845,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19970;old_locus_tag=LU631_19970;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3796390 3796845 . + 0 ID=cds-LU631_RS19970;Parent=gene-LU631_RS19970;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3796845,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203572.1;locus_tag=LU631_RS19970;partial=true;product=SAF domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3797216 3797356 . + . ID=gene-LU631_RS19975;Name=LU631_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19975;old_locus_tag=LU631_19975 NZ_CP089940.1 GeneMarkS-2+ CDS 3797216 3797356 . + 0 ID=cds-WP_161796965.1-18;Parent=gene-LU631_RS19975;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS19975;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3797365 3798579 . + . ID=gene-LU631_RS19980;Name=LU631_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19980;old_locus_tag=LU631_19980 NZ_CP089940.1 Protein Homology CDS 3797365 3798579 . + 0 ID=cds-WP_046371879.1-18;Parent=gene-LU631_RS19980;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS19980;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3798731 3799834 . + . ID=gene-LU631_RS19985;Name=LU631_RS19985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS19985;old_locus_tag=LU631_19985;partial=true;pseudo=true;start_range=.,3798731 NZ_CP089940.1 Protein Homology CDS 3798731 3799834 . + 0 ID=cds-LU631_RS19985;Parent=gene-LU631_RS19985;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013026958.1;locus_tag=LU631_RS19985;partial=true;product=UxaA family hydrolase;pseudo=true;start_range=.,3798731;transl_table=11 NZ_CP089940.1 RefSeq gene 3799878 3800327 . - . ID=gene-LU631_RS19990;Name=LU631_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS19990;old_locus_tag=LU631_19990 NZ_CP089940.1 Protein Homology CDS 3799878 3800327 . - 0 ID=cds-WP_016190184.1;Parent=gene-LU631_RS19990;Dbxref=Genbank:WP_016190184.1;Name=WP_016190184.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019104737.1;locus_tag=LU631_RS19990;product=flavodoxin;protein_id=WP_016190184.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3800349 3801128 . - . ID=gene-LU631_RS19995;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=LU631_RS19995;old_locus_tag=LU631_19995 NZ_CP089940.1 Protein Homology CDS 3800349 3801128 . - 0 ID=cds-WP_016190185.1;Parent=gene-LU631_RS19995;Dbxref=Genbank:WP_016190185.1;Name=WP_016190185.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008101382.1;locus_tag=LU631_RS19995;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_016190185.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3801128 3801451 . - . ID=gene-LU631_RS20000;Name=LU631_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20000;old_locus_tag=LU631_20000 NZ_CP089940.1 Protein Homology CDS 3801128 3801451 . - 0 ID=cds-WP_016190186.1;Parent=gene-LU631_RS20000;Dbxref=Genbank:WP_016190186.1;Name=WP_016190186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203575.1;locus_tag=LU631_RS20000;product=YqcC family protein;protein_id=WP_016190186.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3802004 3802579 . - . ID=gene-LU631_RS20005;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=LU631_RS20005;old_locus_tag=LU631_20005 NZ_CP089940.1 Protein Homology CDS 3802004 3802579 . - 0 ID=cds-WP_040465418.1;Parent=gene-LU631_RS20005;Dbxref=Genbank:WP_040465418.1;Name=WP_040465418.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013510259.1;locus_tag=LU631_RS20005;product=SecY-interacting protein;protein_id=WP_040465418.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3802722 3803567 . + . ID=gene-LU631_RS20010;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=LU631_RS20010;old_locus_tag=LU631_20010 NZ_CP089940.1 Protein Homology CDS 3802722 3803567 . + 0 ID=cds-WP_016190188.1;Parent=gene-LU631_RS20010;Dbxref=Genbank:WP_016190188.1;Name=WP_016190188.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543431.1;locus_tag=LU631_RS20010;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_016190188.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3803758 3805116 . + . ID=gene-LU631_RS20015;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=LU631_RS20015;old_locus_tag=LU631_20015 NZ_CP089940.1 Protein Homology CDS 3803758 3805116 . + 0 ID=cds-WP_016190189.1;Parent=gene-LU631_RS20015;Dbxref=Genbank:WP_016190189.1;Name=WP_016190189.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854629.1;locus_tag=LU631_RS20015;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_016190189.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3805159 3805923 . + . ID=gene-LU631_RS20020;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=LU631_RS20020;old_locus_tag=LU631_20020 NZ_CP089940.1 Protein Homology CDS 3805159 3805923 . + 0 ID=cds-WP_016190190.1;Parent=gene-LU631_RS20020;Dbxref=Genbank:WP_016190190.1;Name=WP_016190190.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203579.1;locus_tag=LU631_RS20020;product=flap endonuclease Xni;protein_id=WP_016190190.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3805958 3807058 . - . ID=gene-LU631_RS20025;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=LU631_RS20025;old_locus_tag=LU631_20025 NZ_CP089940.1 Protein Homology CDS 3805958 3807058 . - 0 ID=cds-WP_016190191.1;Parent=gene-LU631_RS20025;Dbxref=Genbank:WP_016190191.1;Name=WP_016190191.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=LU631_RS20025;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_016190191.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3807051 3807446 . - . ID=gene-LU631_RS20030;Name=LU631_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20030;old_locus_tag=LU631_20030 NZ_CP089940.1 Protein Homology CDS 3807051 3807446 . - 0 ID=cds-WP_016190192.1;Parent=gene-LU631_RS20030;Dbxref=Genbank:WP_016190192.1;Name=WP_016190192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168685.1;locus_tag=LU631_RS20030;product=DUF423 domain-containing protein;protein_id=WP_016190192.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3807497 3808414 . - . ID=gene-LU631_RS20035;Name=LU631_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20035;old_locus_tag=LU631_20035 NZ_CP089940.1 Protein Homology CDS 3807497 3808414 . - 0 ID=cds-WP_016190193.1;Parent=gene-LU631_RS20035;Dbxref=Genbank:WP_016190193.1;Name=WP_016190193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190193.1;locus_tag=LU631_RS20035;product=transcriptional regulator GcvA;protein_id=WP_016190193.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3808861 3809298 . + . ID=gene-LU631_RS20040;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS20040;old_locus_tag=LU631_20040 NZ_CP089940.1 Protein Homology CDS 3808861 3809298 . + 0 ID=cds-WP_046371975.1;Parent=gene-LU631_RS20040;Dbxref=Genbank:WP_046371975.1;Name=WP_046371975.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS20040;product=IS200/IS605 family transposase;protein_id=WP_046371975.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3809387 3809584 . - . ID=gene-LU631_RS20045;Name=LU631_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20045;old_locus_tag=LU631_20045 NZ_CP089940.1 Protein Homology CDS 3809387 3809584 . - 0 ID=cds-WP_016190195.1;Parent=gene-LU631_RS20045;Dbxref=Genbank:WP_016190195.1;Name=WP_016190195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417289.2;locus_tag=LU631_RS20045;product=YgdI/YgdR family lipoprotein;protein_id=WP_016190195.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3809795 3811000 . + . ID=gene-LU631_RS20050;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=LU631_RS20050;old_locus_tag=LU631_20050 NZ_CP089940.1 Protein Homology CDS 3809795 3811000 . + 0 ID=cds-WP_016190196.1;Parent=gene-LU631_RS20050;Dbxref=Genbank:WP_016190196.1;Name=WP_016190196.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203584.1;locus_tag=LU631_RS20050;product=cysteine desulfurase CsdA;protein_id=WP_016190196.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3811003 3811446 . + . ID=gene-LU631_RS20055;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=LU631_RS20055;old_locus_tag=LU631_20055 NZ_CP089940.1 Protein Homology CDS 3811003 3811446 . + 0 ID=cds-WP_082103764.1;Parent=gene-LU631_RS20055;Dbxref=Genbank:WP_082103764.1;Name=WP_082103764.1;Ontology_term=GO:0016226,GO:0031071;gbkey=CDS;gene=csdE;go_function=cysteine desulfurase activity|0031071||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203585.1;locus_tag=LU631_RS20055;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_082103764.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3811447 3812247 . - . ID=gene-LU631_RS20060;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=LU631_RS20060;old_locus_tag=LU631_20060 NZ_CP089940.1 Protein Homology CDS 3811447 3812247 . - 0 ID=cds-WP_016190198.1;Parent=gene-LU631_RS20060;Dbxref=Genbank:WP_016190198.1;Name=WP_016190198.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168680.1;locus_tag=LU631_RS20060;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_016190198.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3812301 3813443 . - . ID=gene-LU631_RS20065;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=LU631_RS20065;old_locus_tag=LU631_20065 NZ_CP089940.1 Protein Homology CDS 3812301 3813443 . - 0 ID=cds-WP_016190199.1;Parent=gene-LU631_RS20065;Dbxref=Genbank:WP_016190199.1;Name=WP_016190199.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155737.1;locus_tag=LU631_RS20065;product=murein transglycosylase A;protein_id=WP_016190199.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3813648 3813724 . + . ID=gene-LU631_RS20070;Name=LU631_RS20070;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS20070;old_locus_tag=LU631_20070 NZ_CP089940.1 tRNAscan-SE tRNA 3813648 3813724 . + . ID=rna-LU631_RS20070;Parent=gene-LU631_RS20070;anticodon=(pos:3813682..3813684);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS20070;product=tRNA-Met NZ_CP089940.1 tRNAscan-SE exon 3813648 3813724 . + . ID=exon-LU631_RS20070-1;Parent=rna-LU631_RS20070;anticodon=(pos:3813682..3813684);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS20070;product=tRNA-Met NZ_CP089940.1 RefSeq gene 3813811 3815040 . - . ID=gene-LU631_RS20075;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=LU631_RS20075;old_locus_tag=LU631_20075 NZ_CP089940.1 Protein Homology CDS 3813811 3815040 . - 0 ID=cds-WP_040465318.1;Parent=gene-LU631_RS20075;Dbxref=Genbank:WP_040465318.1;Name=WP_040465318.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiC;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155735.1;locus_tag=LU631_RS20075;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_040465318.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3815265 3816608 . + . ID=gene-LU631_RS20080;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=LU631_RS20080;old_locus_tag=LU631_20080 NZ_CP089940.1 Protein Homology CDS 3815265 3816608 . + 0 ID=cds-WP_016190201.1;Parent=gene-LU631_RS20080;Dbxref=Genbank:WP_016190201.1;Name=WP_016190201.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=acetyl-CoA:L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669099.1;locus_tag=LU631_RS20080;product=amino-acid N-acetyltransferase;protein_id=WP_016190201.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3816773 3817477 . + . ID=gene-LU631_RS20085;Name=LU631_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20085;old_locus_tag=LU631_20085 NZ_CP089940.1 Protein Homology CDS 3816773 3817477 . + 0 ID=cds-WP_016190202.1;Parent=gene-LU631_RS20085;Dbxref=Genbank:WP_016190202.1;Name=WP_016190202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539164.1;locus_tag=LU631_RS20085;product=hypothetical protein;protein_id=WP_016190202.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3817474 3817911 . + . ID=gene-LU631_RS20090;Name=LU631_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20090;old_locus_tag=LU631_20090 NZ_CP089940.1 Protein Homology CDS 3817474 3817911 . + 0 ID=cds-WP_016190203.1;Parent=gene-LU631_RS20090;Dbxref=Genbank:WP_016190203.1;Name=WP_016190203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668625.1;locus_tag=LU631_RS20090;product=hypothetical protein;protein_id=WP_016190203.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3817943 3819790 . - . ID=gene-LU631_RS20095;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=LU631_RS20095;old_locus_tag=LU631_20095 NZ_CP089940.1 Protein Homology CDS 3817943 3819790 . - 0 ID=cds-WP_016190204.1;Parent=gene-LU631_RS20095;Dbxref=Genbank:WP_016190204.1;Name=WP_016190204.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007890945.1;locus_tag=LU631_RS20095;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_016190204.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3819787 3823323 . - . ID=gene-LU631_RS20100;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=LU631_RS20100;old_locus_tag=LU631_20100 NZ_CP089940.1 Protein Homology CDS 3819787 3823323 . - 0 ID=cds-WP_016190205.1;Parent=gene-LU631_RS20100;Dbxref=Genbank:WP_016190205.1;Name=WP_016190205.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203592.1;locus_tag=LU631_RS20100;product=exodeoxyribonuclease V subunit beta;protein_id=WP_016190205.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3823320 3826208 . - . ID=gene-LU631_RS20105;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=LU631_RS20105;old_locus_tag=LU631_20105 NZ_CP089940.1 Protein Homology CDS 3823320 3826208 . - 0 ID=cds-WP_016190206.1;Parent=gene-LU631_RS20105;Dbxref=Genbank:WP_016190206.1;Name=WP_016190206.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146518.1;locus_tag=LU631_RS20105;product=pitrilysin;protein_id=WP_016190206.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3826428 3829796 . - . ID=gene-LU631_RS20110;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=LU631_RS20110;old_locus_tag=LU631_20110 NZ_CP089940.1 Protein Homology CDS 3826428 3829796 . - 0 ID=cds-WP_016190207.1;Parent=gene-LU631_RS20110;Dbxref=Genbank:WP_016190207.1;Name=WP_016190207.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203594.1;locus_tag=LU631_RS20110;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_016190207.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3830138 3830434 . - . ID=gene-LU631_RS20115;Name=LU631_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20115;old_locus_tag=LU631_20115 NZ_CP089940.1 Protein Homology CDS 3830138 3830434 . - 0 ID=cds-WP_016190208.1;Parent=gene-LU631_RS20115;Dbxref=Genbank:WP_016190208.1;Name=WP_016190208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203595.1;locus_tag=LU631_RS20115;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_016190208.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3830427 3830849 . - . ID=gene-LU631_RS20120;Name=LU631_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20120;old_locus_tag=LU631_20120 NZ_CP089940.1 Protein Homology CDS 3830427 3830849 . - 0 ID=cds-WP_040465319.1;Parent=gene-LU631_RS20120;Dbxref=Genbank:WP_040465319.1;Name=WP_040465319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168665.1;locus_tag=LU631_RS20120;product=DUF2509 family protein;protein_id=WP_040465319.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3830846 3831397 . - . ID=gene-LU631_RS20125;Name=LU631_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20125;old_locus_tag=LU631_20125 NZ_CP089940.1 Protein Homology CDS 3830846 3831397 . - 0 ID=cds-WP_040465320.1;Parent=gene-LU631_RS20125;Dbxref=Genbank:WP_040465320.1;Name=WP_040465320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168664.1;locus_tag=LU631_RS20125;product=prepilin peptidase-dependent protein;protein_id=WP_040465320.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3831388 3831837 . - . ID=gene-LU631_RS20130;Name=LU631_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20130;old_locus_tag=LU631_20130 NZ_CP089940.1 Protein Homology CDS 3831388 3831837 . - 0 ID=cds-WP_016190211.1;Parent=gene-LU631_RS20130;Dbxref=Genbank:WP_016190211.1;Name=WP_016190211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803575.1;locus_tag=LU631_RS20130;product=prepilin peptidase-dependent protein;protein_id=WP_016190211.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3832500 3833267 . + . ID=gene-LU631_RS20135;Name=LU631_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20135;old_locus_tag=LU631_20135 NZ_CP089940.1 Protein Homology CDS 3832500 3833267 . + 0 ID=cds-WP_016190212.1;Parent=gene-LU631_RS20135;Dbxref=Genbank:WP_016190212.1;Name=WP_016190212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010300862.1;locus_tag=LU631_RS20135;product=SDR family oxidoreductase;protein_id=WP_016190212.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3833427 3834263 . + . ID=gene-LU631_RS20140;Name=LU631_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20140;old_locus_tag=LU631_20140 NZ_CP089940.1 Protein Homology CDS 3833427 3834263 . + 0 ID=cds-WP_016190213.1;Parent=gene-LU631_RS20140;Dbxref=Genbank:WP_016190213.1;Name=WP_016190213.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010300859.1;locus_tag=LU631_RS20140;product=TauD/TfdA family dioxygenase;protein_id=WP_016190213.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3834256 3835305 . + . ID=gene-LU631_RS20145;Name=LU631_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20145;old_locus_tag=LU631_20145 NZ_CP089940.1 Protein Homology CDS 3834256 3835305 . + 0 ID=cds-WP_016190214.1;Parent=gene-LU631_RS20145;Dbxref=Genbank:WP_016190214.1;Name=WP_016190214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010300857.1;locus_tag=LU631_RS20145;product=sulfotransferase family protein;protein_id=WP_016190214.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3835289 3836533 . + . ID=gene-LU631_RS20150;Name=LU631_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20150;old_locus_tag=LU631_20150 NZ_CP089940.1 Protein Homology CDS 3835289 3836533 . + 0 ID=cds-WP_016190215.1;Parent=gene-LU631_RS20150;Dbxref=Genbank:WP_016190215.1;Name=WP_016190215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010300851.1;locus_tag=LU631_RS20150;product=aspartate aminotransferase family protein;protein_id=WP_016190215.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3836576 3836962 . + . ID=gene-LU631_RS20155;Name=LU631_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20155;old_locus_tag=LU631_20155 NZ_CP089940.1 GeneMarkS-2+ CDS 3836576 3836962 . + 0 ID=cds-WP_232426815.1;Parent=gene-LU631_RS20155;Dbxref=Genbank:WP_232426815.1;Name=WP_232426815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20155;product=hypothetical protein;protein_id=WP_232426815.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3836963 3837106 . + . ID=gene-LU631_RS20160;Name=LU631_RS20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20160;old_locus_tag=LU631_20160 NZ_CP089940.1 Protein Homology CDS 3836963 3837106 . + 0 ID=cds-WP_232426816.1;Parent=gene-LU631_RS20160;Dbxref=Genbank:WP_232426816.1;Name=WP_232426816.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025043.2;locus_tag=LU631_RS20160;product=hypothetical protein;protein_id=WP_232426816.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3837225 3837767 . + . ID=gene-LU631_RS20165;Name=LU631_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20165;old_locus_tag=LU631_20165 NZ_CP089940.1 Protein Homology CDS 3837225 3837767 . + 0 ID=cds-WP_016190216.1;Parent=gene-LU631_RS20165;Dbxref=Genbank:WP_016190216.1;Name=WP_016190216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015840472.1;locus_tag=LU631_RS20165;product=AAA family ATPase;protein_id=WP_016190216.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3838497 3839291 . - . ID=gene-LU631_RS20170;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=LU631_RS20170;old_locus_tag=LU631_20170 NZ_CP089940.1 Protein Homology CDS 3838497 3839291 . - 0 ID=cds-WP_016190218.1;Parent=gene-LU631_RS20170;Dbxref=Genbank:WP_016190218.1;Name=WP_016190218.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228599.1;locus_tag=LU631_RS20170;product=thymidylate synthase;protein_id=WP_016190218.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3839288 3840169 . - . ID=gene-LU631_RS20175;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=LU631_RS20175;old_locus_tag=LU631_20175 NZ_CP089940.1 Protein Homology CDS 3839288 3840169 . - 0 ID=cds-WP_016190219.1;Parent=gene-LU631_RS20175;Dbxref=Genbank:WP_016190219.1;Name=WP_016190219.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155700.1;locus_tag=LU631_RS20175;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_016190219.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3840351 3842597 . - . ID=gene-LU631_RS20180;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=LU631_RS20180;old_locus_tag=LU631_20180 NZ_CP089940.1 Protein Homology CDS 3840351 3842597 . - 0 ID=cds-WP_016190220.1;Parent=gene-LU631_RS20180;Dbxref=Genbank:WP_016190220.1;Name=WP_016190220.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016538050.1;locus_tag=LU631_RS20180;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_016190220.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3842610 3843134 . - . ID=gene-LU631_RS20185;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=LU631_RS20185;old_locus_tag=LU631_20185 NZ_CP089940.1 Protein Homology CDS 3842610 3843134 . - 0 ID=cds-WP_016190221.1;Parent=gene-LU631_RS20185;Dbxref=Genbank:WP_016190221.1;Name=WP_016190221.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311714.1;locus_tag=LU631_RS20185;product=RNA pyrophosphohydrolase;protein_id=WP_016190221.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3843811 3844497 . + . ID=gene-LU631_RS20190;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=LU631_RS20190;old_locus_tag=LU631_20190 NZ_CP089940.1 Protein Homology CDS 3843811 3844497 . + 0 ID=cds-WP_016190223.1;Parent=gene-LU631_RS20190;Dbxref=Genbank:WP_016190223.1;Name=WP_016190223.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203602.1;locus_tag=LU631_RS20190;product=DNA mismatch repair endonuclease MutH;protein_id=WP_016190223.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3844660 3845370 . + . ID=gene-LU631_RS20195;Name=LU631_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20195;old_locus_tag=LU631_20195 NZ_CP089940.1 Protein Homology CDS 3844660 3845370 . + 0 ID=cds-WP_016190224.1;Parent=gene-LU631_RS20195;Dbxref=Genbank:WP_016190224.1;Name=WP_016190224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010248654.1;locus_tag=LU631_RS20195;product=TerC family protein;protein_id=WP_016190224.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3845533 3845748 . + . ID=gene-LU631_RS20200;Name=LU631_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20200;old_locus_tag=LU631_20200 NZ_CP089940.1 Protein Homology CDS 3845533 3845748 . + 0 ID=cds-WP_016190225.1;Parent=gene-LU631_RS20200;Dbxref=Genbank:WP_016190225.1;Name=WP_016190225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594481.1;locus_tag=LU631_RS20200;product=YgdI/YgdR family lipoprotein;protein_id=WP_016190225.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3846049 3847089 . + . ID=gene-LU631_RS20205;Name=LU631_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20205;old_locus_tag=LU631_20205 NZ_CP089940.1 Protein Homology CDS 3846049 3847089 . + 0 ID=cds-WP_016190226.1;Parent=gene-LU631_RS20205;Dbxref=Genbank:WP_016190226.1;Name=WP_016190226.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120804.1;locus_tag=LU631_RS20205;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_016190226.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3847180 3848391 . - . ID=gene-LU631_RS20210;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=LU631_RS20210;old_locus_tag=LU631_20210 NZ_CP089940.1 Protein Homology CDS 3847180 3848391 . - 0 ID=cds-WP_016190227.1;Parent=gene-LU631_RS20210;Dbxref=Genbank:WP_016190227.1;Name=WP_016190227.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539390.1;locus_tag=LU631_RS20210;product=lysophospholipid transporter LplT;protein_id=WP_016190227.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3848369 3850543 . - . ID=gene-LU631_RS20215;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=LU631_RS20215;old_locus_tag=LU631_20215 NZ_CP089940.1 Protein Homology CDS 3848369 3850543 . - 0 ID=cds-WP_016190228.1;Parent=gene-LU631_RS20215;Dbxref=Genbank:WP_016190228.1;Name=WP_016190228.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168652.1;locus_tag=LU631_RS20215;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_016190228.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3850786 3851980 . - . ID=gene-LU631_RS20220;Name=LU631_RS20220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20220;old_locus_tag=LU631_20220;pseudo=true NZ_CP089940.1 Protein Homology CDS 3850786 3851980 . - 0 ID=cds-LU631_RS20220;Parent=gene-LU631_RS20220;Note=frameshifted%3B internal stop;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803561.1;locus_tag=LU631_RS20220;product=efflux transporter outer membrane subunit;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3851990 3852305 . - . ID=gene-LU631_RS20225;Name=LU631_RS20225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20225;old_locus_tag=LU631_20225;partial=true;pseudo=true;start_range=.,3851990 NZ_CP089940.1 Protein Homology CDS 3851990 3852305 . - 0 ID=cds-LU631_RS20225;Parent=gene-LU631_RS20225;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013510294.1;locus_tag=LU631_RS20225;partial=true;product=biotin/lipoyl-binding protein;pseudo=true;start_range=.,3851990;transl_table=11 NZ_CP089940.1 RefSeq gene 3853044 3854768 . - . ID=gene-LU631_RS20230;Name=LU631_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20230;old_locus_tag=LU631_20230 NZ_CP089940.1 Protein Homology CDS 3853044 3854768 . - 0 ID=cds-WP_016190231.1;Parent=gene-LU631_RS20230;Dbxref=Genbank:WP_016190231.1;Name=WP_016190231.1;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203616.1;locus_tag=LU631_RS20230;product=penicillin-binding transpeptidase domain-containing protein;protein_id=WP_016190231.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3855089 3856413 . - . ID=gene-LU631_RS20235;Name=LU631_RS20235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20235;old_locus_tag=LU631_20235;pseudo=true NZ_CP089940.1 Protein Homology CDS 3855089 3856413 . - 0 ID=cds-LU631_RS20235;Parent=gene-LU631_RS20235;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS20235;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3856531 3858751 . - . ID=gene-LU631_RS20240;Name=LU631_RS20240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20240;old_locus_tag=LU631_20240;pseudo=true NZ_CP089940.1 Protein Homology CDS 3856531 3858751 . - 0 ID=cds-LU631_RS20240;Parent=gene-LU631_RS20240;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669156.1;locus_tag=LU631_RS20240;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3858943 3859944 . + . ID=gene-LU631_RS20245;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=LU631_RS20245;old_locus_tag=LU631_20245 NZ_CP089940.1 Protein Homology CDS 3858943 3859944 . + 0 ID=cds-WP_016190232.1;Parent=gene-LU631_RS20245;Dbxref=Genbank:WP_016190232.1;Name=WP_016190232.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669157.1;locus_tag=LU631_RS20245;product=HTH-type transcriptional regulator GalR;protein_id=WP_016190232.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3859953 3861212 . - . ID=gene-LU631_RS20250;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=LU631_RS20250;old_locus_tag=LU631_20250 NZ_CP089940.1 Protein Homology CDS 3859953 3861212 . - 0 ID=cds-WP_016190233.1;Parent=gene-LU631_RS20250;Dbxref=Genbank:WP_016190233.1;Name=WP_016190233.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120805.1;locus_tag=LU631_RS20250;product=diaminopimelate decarboxylase;protein_id=WP_016190233.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3861330 3862250 . + . ID=gene-LU631_RS20255;Name=LU631_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20255;old_locus_tag=LU631_20255 NZ_CP089940.1 Protein Homology CDS 3861330 3862250 . + 0 ID=cds-WP_016190234.1;Parent=gene-LU631_RS20255;Dbxref=Genbank:WP_016190234.1;Name=WP_016190234.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168608.1;locus_tag=LU631_RS20255;product=LysR family transcriptional regulator;protein_id=WP_016190234.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3862247 3863401 . - . ID=gene-LU631_RS20260;Name=LU631_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20260;old_locus_tag=LU631_20260 NZ_CP089940.1 Protein Homology CDS 3862247 3863401 . - 0 ID=cds-WP_016190235.1;Parent=gene-LU631_RS20260;Dbxref=Genbank:WP_016190235.1;Name=WP_016190235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007894151.1;locus_tag=LU631_RS20260;product=MFS transporter;protein_id=WP_016190235.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3863866 3864489 . + . ID=gene-LU631_RS20265;Name=LU631_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20265;old_locus_tag=LU631_20265 NZ_CP089940.1 Protein Homology CDS 3863866 3864489 . + 0 ID=cds-WP_040465321.1;Parent=gene-LU631_RS20265;Dbxref=Genbank:WP_040465321.1;Name=WP_040465321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155617.1;locus_tag=LU631_RS20265;product=hypothetical protein;protein_id=WP_040465321.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3864566 3864688 . - . ID=gene-LU631_RS26205;Name=LU631_RS26205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26205 NZ_CP089940.1 GeneMarkS-2+ CDS 3864566 3864688 . - 0 ID=cds-WP_256371722.1;Parent=gene-LU631_RS26205;Dbxref=Genbank:WP_256371722.1;Name=WP_256371722.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS26205;product=hypothetical protein;protein_id=WP_256371722.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3864785 3865492 . - . ID=gene-LU631_RS20270;Name=LU631_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20270;old_locus_tag=LU631_20270 NZ_CP089940.1 Protein Homology CDS 3864785 3865492 . - 0 ID=cds-WP_016190237.1;Parent=gene-LU631_RS20270;Dbxref=Genbank:WP_016190237.1;Name=WP_016190237.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020387.2;locus_tag=LU631_RS20270;product=RES family NAD+ phosphorylase;protein_id=WP_016190237.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3865485 3866213 . - . ID=gene-LU631_RS20275;Name=LU631_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20275;old_locus_tag=LU631_20275 NZ_CP089940.1 Protein Homology CDS 3865485 3866213 . - 0 ID=cds-WP_232426817.1;Parent=gene-LU631_RS20275;Dbxref=Genbank:WP_232426817.1;Name=WP_232426817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011871451.1;locus_tag=LU631_RS20275;product=hypothetical protein;protein_id=WP_232426817.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3866718 3867882 . + . ID=gene-LU631_RS20280;Name=LU631_RS20280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20280;old_locus_tag=LU631_20280;pseudo=true NZ_CP089940.1 Protein Homology CDS 3866718 3867882 . + 0 ID=cds-LU631_RS20280;Parent=gene-LU631_RS20280;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612263.1;locus_tag=LU631_RS20280;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3868590 3869087 . - . ID=gene-LU631_RS20285;Name=LU631_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20285;old_locus_tag=LU631_20285 NZ_CP089940.1 GeneMarkS-2+ CDS 3868590 3869087 . - 0 ID=cds-WP_016190239.1;Parent=gene-LU631_RS20285;Dbxref=Genbank:WP_016190239.1;Name=WP_016190239.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20285;product=hypothetical protein;protein_id=WP_016190239.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3869015 3869254 . - . ID=gene-LU631_RS20290;Name=LU631_RS20290;end_range=3869254,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20290;old_locus_tag=LU631_20290;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3869015 3869254 . - 0 ID=cds-LU631_RS20290;Parent=gene-LU631_RS20290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3869254,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022362.2;locus_tag=LU631_RS20290;partial=true;product=DUF2778 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3869596 3871116 . - . ID=gene-LU631_RS20295;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=LU631_RS20295;old_locus_tag=LU631_20295 NZ_CP089940.1 Protein Homology CDS 3869596 3871116 . - 0 ID=cds-WP_016190240.1;Parent=gene-LU631_RS20295;Dbxref=Genbank:WP_016190240.1;Name=WP_016190240.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010248682.1;locus_tag=LU631_RS20295;product=lysine--tRNA ligase;protein_id=WP_016190240.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3871126 3872224 . - . ID=gene-LU631_RS20300;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=LU631_RS20300;old_locus_tag=LU631_20300 NZ_CP089940.1 Protein Homology CDS 3872150 3872224 . - 0 ID=cds-WP_152664187.1;Parent=gene-LU631_RS20300;Dbxref=Genbank:WP_152664187.1;Name=WP_152664187.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=LU631_RS20300;product=peptide chain release factor 2;protein_id=WP_152664187.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 3871126 3872148 . - 0 ID=cds-WP_152664187.1;Parent=gene-LU631_RS20300;Dbxref=Genbank:WP_152664187.1;Name=WP_152664187.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=LU631_RS20300;product=peptide chain release factor 2;protein_id=WP_152664187.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3872695 3874413 . - . ID=gene-LU631_RS20305;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=LU631_RS20305;old_locus_tag=LU631_20305 NZ_CP089940.1 Protein Homology CDS 3872695 3874413 . - 0 ID=cds-WP_016190242.1;Parent=gene-LU631_RS20305;Dbxref=Genbank:WP_016190242.1;Name=WP_016190242.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168603.1;locus_tag=LU631_RS20305;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_016190242.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3874419 3875123 . - . ID=gene-LU631_RS20310;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=LU631_RS20310;old_locus_tag=LU631_20310 NZ_CP089940.1 Protein Homology CDS 3874419 3875123 . - 0 ID=cds-WP_016190243.1;Parent=gene-LU631_RS20310;Dbxref=Genbank:WP_016190243.1;Name=WP_016190243.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673664.1;locus_tag=LU631_RS20310;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_016190243.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3875167 3876060 . - . ID=gene-LU631_RS20315;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=LU631_RS20315;old_locus_tag=LU631_20315 NZ_CP089940.1 Protein Homology CDS 3875167 3876060 . - 0 ID=cds-WP_016190244.1;Parent=gene-LU631_RS20315;Dbxref=Genbank:WP_016190244.1;Name=WP_016190244.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120813.1;locus_tag=LU631_RS20315;product=site-specific tyrosine recombinase XerD;protein_id=WP_016190244.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3876159 3876677 . + . ID=gene-LU631_RS20320;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=LU631_RS20320;old_locus_tag=LU631_20320 NZ_CP089940.1 Protein Homology CDS 3876159 3876677 . + 0 ID=cds-WP_016190245.1;Parent=gene-LU631_RS20320;Dbxref=Genbank:WP_016190245.1;Name=WP_016190245.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155596.1;locus_tag=LU631_RS20320;product=flavodoxin FldB;protein_id=WP_016190245.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3876787 3877188 . - . ID=gene-LU631_RS20325;Name=LU631_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20325;old_locus_tag=LU631_20325 NZ_CP089940.1 Protein Homology CDS 3876787 3877188 . - 0 ID=cds-WP_016190246.1;Parent=gene-LU631_RS20325;Dbxref=Genbank:WP_016190246.1;Name=WP_016190246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181233.1;locus_tag=LU631_RS20325;product=hypothetical protein;protein_id=WP_016190246.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3877169 3877435 . - . ID=gene-LU631_RS20330;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=LU631_RS20330;old_locus_tag=LU631_20330 NZ_CP089940.1 Protein Homology CDS 3877169 3877435 . - 0 ID=cds-WP_016190247.1;Parent=gene-LU631_RS20330;Dbxref=Genbank:WP_016190247.1;Name=WP_016190247.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228693.1;locus_tag=LU631_RS20330;product=FAD assembly factor SdhE;protein_id=WP_016190247.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3877652 3878632 . + . ID=gene-LU631_RS20335;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=LU631_RS20335;old_locus_tag=LU631_20335 NZ_CP089940.1 Protein Homology CDS 3877652 3878632 . + 0 ID=cds-WP_016190248.1;Parent=gene-LU631_RS20335;Dbxref=Genbank:WP_016190248.1;Name=WP_016190248.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120817.1;locus_tag=LU631_RS20335;product=tRNA-modifying protein YgfZ;protein_id=WP_016190248.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3878674 3878784 . - . ID=gene-LU631_RS20340;Name=LU631_RS20340;end_range=3878784,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20340;old_locus_tag=LU631_20340;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3878674 3878784 . - 0 ID=cds-LU631_RS20340;Parent=gene-LU631_RS20340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3878784,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442496.1;locus_tag=LU631_RS20340;partial=true;product=hemolysin III family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3878806 3879309 . - . ID=gene-LU631_RS20345;Name=LU631_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20345;old_locus_tag=LU631_20345 NZ_CP089940.1 Protein Homology CDS 3878806 3879309 . - 0 ID=cds-WP_046371978.1;Parent=gene-LU631_RS20345;Dbxref=Genbank:WP_046371978.1;Name=WP_046371978.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU631_RS20345;product=IS1 family transposase;protein_id=WP_046371978.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3879553 3879943 . - . ID=gene-LU631_RS20355;Name=LU631_RS20355;end_range=3879943,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20355;old_locus_tag=LU631_20355;partial=true;pseudo=true;start_range=.,3879553 NZ_CP089940.1 Protein Homology CDS 3879553 3879943 . - 0 ID=cds-LU631_RS20355;Parent=gene-LU631_RS20355;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016020;end_range=3879943,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003838267.1;locus_tag=LU631_RS20355;partial=true;product=hemolysin III family protein;pseudo=true;start_range=.,3879553;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3879958 3880428 . + . ID=gene-LU631_RS20360;Name=LU631_RS20360;end_range=3880428,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20360;old_locus_tag=LU631_20360;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 3879958 3880428 . + 0 ID=cds-LU631_RS20360;Parent=gene-LU631_RS20360;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008982;end_range=3880428,.;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005159369.1;locus_tag=LU631_RS20360;partial=true;product=PTS transporter subunit EIIB;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3880622 3882061 . + . ID=gene-LU631_RS20365;Name=LU631_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20365;old_locus_tag=LU631_20365 NZ_CP089940.1 Protein Homology CDS 3880622 3882061 . + 0 ID=cds-WP_016190252.1;Parent=gene-LU631_RS20365;Dbxref=Genbank:WP_016190252.1;Name=WP_016190252.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203653.1;locus_tag=LU631_RS20365;product=6-phospho-beta-glucosidase;protein_id=WP_016190252.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3882333 3882443 . + . ID=gene-LU631_RS20370;Name=LU631_RS20370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20370;old_locus_tag=LU631_20370;partial=true;pseudo=true;start_range=.,3882333 NZ_CP089940.1 Protein Homology CDS 3882333 3882443 . + 0 ID=cds-LU631_RS20370;Parent=gene-LU631_RS20370;Note=in E. coli K-12 this is in prophage P2 remnant%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000468310.1;locus_tag=LU631_RS20370;partial=true;product=transcriptional regulator;pseudo=true;start_range=.,3882333;transl_table=11 NZ_CP089940.1 RefSeq gene 3882577 3882867 . - . ID=gene-LU631_RS20375;Name=LU631_RS20375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20375;old_locus_tag=LU631_20375 NZ_CP089940.1 GeneMarkS-2+ CDS 3882577 3882867 . - 0 ID=cds-WP_016190253.1;Parent=gene-LU631_RS20375;Dbxref=Genbank:WP_016190253.1;Name=WP_016190253.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20375;product=hypothetical protein;protein_id=WP_016190253.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3883131 3886013 . - . ID=gene-LU631_RS20380;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=LU631_RS20380;old_locus_tag=LU631_20380 NZ_CP089940.1 Protein Homology CDS 3883131 3886013 . - 0 ID=cds-WP_016190254.1;Parent=gene-LU631_RS20380;Dbxref=Genbank:WP_016190254.1;Name=WP_016190254.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155577.1;locus_tag=LU631_RS20380;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_016190254.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3886037 3886423 . - . ID=gene-LU631_RS20385;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=LU631_RS20385;old_locus_tag=LU631_20385 NZ_CP089940.1 Protein Homology CDS 3886037 3886423 . - 0 ID=cds-WP_016190255.1;Parent=gene-LU631_RS20385;Dbxref=Genbank:WP_016190255.1;Name=WP_016190255.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852867.1;locus_tag=LU631_RS20385;product=glycine cleavage system protein GcvH;protein_id=WP_016190255.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3886499 3887593 . - . ID=gene-LU631_RS20390;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=LU631_RS20390;old_locus_tag=LU631_20390 NZ_CP089940.1 Protein Homology CDS 3886499 3887593 . - 0 ID=cds-WP_016190256.1;Parent=gene-LU631_RS20390;Dbxref=Genbank:WP_016190256.1;Name=WP_016190256.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120824.1;locus_tag=LU631_RS20390;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_016190256.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3888401 3888658 . + . ID=gene-LU631_RS20395;Name=LU631_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20395;old_locus_tag=LU631_20395 NZ_CP089940.1 GeneMarkS-2+ CDS 3888401 3888658 . + 0 ID=cds-WP_051124334.1;Parent=gene-LU631_RS20395;Dbxref=Genbank:WP_051124334.1;Name=WP_051124334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20395;product=hypothetical protein;protein_id=WP_051124334.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3888707 3888946 . + . ID=gene-LU631_RS20400;Name=LU631_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20400;old_locus_tag=LU631_20400 NZ_CP089940.1 GeneMarkS-2+ CDS 3888707 3888946 . + 0 ID=cds-WP_016190258.1;Parent=gene-LU631_RS20400;Dbxref=Genbank:WP_016190258.1;Name=WP_016190258.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20400;product=hypothetical protein;protein_id=WP_016190258.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3889013 3889240 . + . ID=gene-LU631_RS20405;Name=LU631_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20405;old_locus_tag=LU631_20405 NZ_CP089940.1 GeneMarkS-2+ CDS 3889013 3889240 . + 0 ID=cds-WP_016190259.1;Parent=gene-LU631_RS20405;Dbxref=Genbank:WP_016190259.1;Name=WP_016190259.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20405;product=hypothetical protein;protein_id=WP_016190259.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3889255 3890457 . - . ID=gene-LU631_RS20410;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=LU631_RS20410;old_locus_tag=LU631_20410 NZ_CP089940.1 Protein Homology CDS 3889255 3890457 . - 0 ID=cds-WP_016190260.1;Parent=gene-LU631_RS20410;Dbxref=Genbank:WP_016190260.1;Name=WP_016190260.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852862.1;locus_tag=LU631_RS20410;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_016190260.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3890471 3891649 . - . ID=gene-LU631_RS20415;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=LU631_RS20415;old_locus_tag=LU631_20415 NZ_CP089940.1 Protein Homology CDS 3890471 3891649 . - 0 ID=cds-WP_016190261.1;Parent=gene-LU631_RS20415;Dbxref=Genbank:WP_016190261.1;Name=WP_016190261.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543342.1;locus_tag=LU631_RS20415;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_016190261.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3891646 3892962 . - . ID=gene-LU631_RS20420;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=LU631_RS20420;old_locus_tag=LU631_20420 NZ_CP089940.1 Protein Homology CDS 3891646 3892962 . - 0 ID=cds-WP_016190262.1;Parent=gene-LU631_RS20420;Dbxref=Genbank:WP_016190262.1;Name=WP_016190262.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543341.1;locus_tag=LU631_RS20420;product=Xaa-Pro aminopeptidase;protein_id=WP_016190262.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3892993 3893571 . - . ID=gene-LU631_RS20425;Name=LU631_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20425;old_locus_tag=LU631_20425 NZ_CP089940.1 Protein Homology CDS 3892993 3893571 . - 0 ID=cds-WP_016190263.1;Parent=gene-LU631_RS20425;Dbxref=Genbank:WP_016190263.1;Name=WP_016190263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860099.1;locus_tag=LU631_RS20425;product=YecA family protein;protein_id=WP_016190263.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3893741 3894070 . + . ID=gene-LU631_RS20430;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=LU631_RS20430;old_locus_tag=LU631_20430 NZ_CP089940.1 Protein Homology CDS 3893741 3894070 . + 0 ID=cds-WP_016190264.1;Parent=gene-LU631_RS20430;Dbxref=Genbank:WP_016190264.1;Name=WP_016190264.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005971092.1;locus_tag=LU631_RS20430;product=cell division protein ZapA;protein_id=WP_016190264.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3894111 3894294 . + . ID=gene-LU631_RS20435;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=LU631_RS20435;old_locus_tag=LU631_20435 NZ_CP089940.1 cmsearch ncRNA 3894111 3894294 . + . ID=rna-LU631_RS20435;Parent=gene-LU631_RS20435;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS20435;product=6S RNA NZ_CP089940.1 cmsearch exon 3894111 3894294 . + . ID=exon-LU631_RS20435-1;Parent=rna-LU631_RS20435;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS20435;product=6S RNA NZ_CP089940.1 RefSeq gene 3894366 3894953 . + . ID=gene-LU631_RS20440;Name=LU631_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20440;old_locus_tag=LU631_20440 NZ_CP089940.1 Protein Homology CDS 3894366 3894953 . + 0 ID=cds-WP_016190266.1;Parent=gene-LU631_RS20440;Dbxref=Genbank:WP_016190266.1;Name=WP_016190266.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543338.1;locus_tag=LU631_RS20440;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_016190266.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3895163 3896398 . - . ID=gene-LU631_RS20445;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=LU631_RS20445;old_locus_tag=LU631_20445 NZ_CP089940.1 Protein Homology CDS 3895163 3896398 . - 0 ID=cds-WP_016190267.1;Parent=gene-LU631_RS20445;Dbxref=Genbank:WP_016190267.1;Name=WP_016190267.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228712.1;locus_tag=LU631_RS20445;product=phosphoglycerate dehydrogenase;protein_id=WP_016190267.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3896679 3897338 . - . ID=gene-LU631_RS20450;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=LU631_RS20450;old_locus_tag=LU631_20450 NZ_CP089940.1 Protein Homology CDS 3896679 3897338 . - 0 ID=cds-WP_016190268.1;Parent=gene-LU631_RS20450;Dbxref=Genbank:WP_016190268.1;Name=WP_016190268.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004876719.1;locus_tag=LU631_RS20450;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_016190268.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3897534 3898430 . + . ID=gene-LU631_RS20455;Name=LU631_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20455;old_locus_tag=LU631_20455 NZ_CP089940.1 Protein Homology CDS 3897534 3898430 . + 0 ID=cds-WP_016190269.1;Parent=gene-LU631_RS20455;Dbxref=Genbank:WP_016190269.1;Name=WP_016190269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828351.1;locus_tag=LU631_RS20455;product=LysR family transcriptional regulator ArgP;protein_id=WP_016190269.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3898437 3899162 . - . ID=gene-LU631_RS20460;Name=LU631_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20460;old_locus_tag=LU631_20460 NZ_CP089940.1 Protein Homology CDS 3898437 3899162 . - 0 ID=cds-WP_016190270.1;Parent=gene-LU631_RS20460;Dbxref=Genbank:WP_016190270.1;Name=WP_016190270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803510.1;locus_tag=LU631_RS20460;product=oxidative stress defense protein;protein_id=WP_016190270.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3899554 3900216 . - . ID=gene-LU631_RS20465;Name=LU631_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20465;old_locus_tag=LU631_20465 NZ_CP089940.1 GeneMarkS-2+ CDS 3899554 3900216 . - 0 ID=cds-WP_016190271.1;Parent=gene-LU631_RS20465;Dbxref=Genbank:WP_016190271.1;Name=WP_016190271.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20465;product=MFS transporter;protein_id=WP_016190271.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3900185 3900814 . - . ID=gene-LU631_RS20470;Name=LU631_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20470;old_locus_tag=LU631_20470 NZ_CP089940.1 Protein Homology CDS 3900185 3900814 . - 0 ID=cds-WP_016190272.1;Parent=gene-LU631_RS20470;Dbxref=Genbank:WP_016190272.1;Name=WP_016190272.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203669.1;locus_tag=LU631_RS20470;product=LysE family transporter;protein_id=WP_016190272.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3901006 3901436 . - . ID=gene-LU631_RS20475;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS20475;old_locus_tag=LU631_20475;pseudo=true NZ_CP089940.1 Protein Homology CDS 3901006 3901436 . - 0 ID=cds-LU631_RS20475;Parent=gene-LU631_RS20475;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU631_RS20475;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3901608 3902492 . - . ID=gene-LU631_RS20480;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=LU631_RS20480;old_locus_tag=LU631_20480 NZ_CP089940.1 Protein Homology CDS 3901608 3902492 . - 0 ID=cds-WP_016190274.1;Parent=gene-LU631_RS20480;Dbxref=Genbank:WP_016190274.1;Name=WP_016190274.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594505.1;locus_tag=LU631_RS20480;product=small-conductance mechanosensitive channel MscS;protein_id=WP_016190274.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3902801 3903880 . - . ID=gene-LU631_RS20485;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=LU631_RS20485;old_locus_tag=LU631_20485 NZ_CP089940.1 Protein Homology CDS 3902801 3903880 . - 0 ID=cds-WP_016190275.1;Parent=gene-LU631_RS20485;Dbxref=Genbank:WP_016190275.1;Name=WP_016190275.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228720.1;locus_tag=LU631_RS20485;product=class II fructose-bisphosphate aldolase;protein_id=WP_016190275.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3903968 3905128 . - . ID=gene-LU631_RS20490;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=LU631_RS20490;old_locus_tag=LU631_20490 NZ_CP089940.1 Protein Homology CDS 3903968 3905128 . - 0 ID=cds-WP_016190276.1;Parent=gene-LU631_RS20490;Dbxref=Genbank:WP_016190276.1;Name=WP_016190276.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461985.1;locus_tag=LU631_RS20490;product=phosphoglycerate kinase;protein_id=WP_016190276.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3905151 3906197 . - . ID=gene-LU631_RS20495;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=LU631_RS20495;old_locus_tag=LU631_20495 NZ_CP089940.1 Protein Homology CDS 3905151 3906197 . - 0 ID=cds-WP_016190277.1;Parent=gene-LU631_RS20495;Dbxref=Genbank:WP_016190277.1;Name=WP_016190277.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155511.1;locus_tag=LU631_RS20495;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_016190277.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3906658 3906831 . + . ID=gene-LU631_RS20500;Name=LU631_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20500;old_locus_tag=LU631_20500 NZ_CP089940.1 GeneMarkS-2+ CDS 3906658 3906831 . + 0 ID=cds-WP_157275216.1;Parent=gene-LU631_RS20500;Dbxref=Genbank:WP_157275216.1;Name=WP_157275216.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20500;product=hypothetical protein;protein_id=WP_157275216.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3906824 3907366 . + . ID=gene-LU631_RS20505;Name=LU631_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20505;old_locus_tag=LU631_20505 NZ_CP089940.1 Protein Homology CDS 3906824 3907366 . + 0 ID=cds-WP_157275217.1;Parent=gene-LU631_RS20505;Dbxref=Genbank:WP_157275217.1;Name=WP_157275217.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016408.2;locus_tag=LU631_RS20505;product=polymer-forming cytoskeletal protein;protein_id=WP_157275217.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3907886 3909877 . - . ID=gene-LU631_RS20510;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=LU631_RS20510;old_locus_tag=LU631_20510 NZ_CP089940.1 Protein Homology CDS 3907886 3909877 . - 0 ID=cds-WP_016190279.1;Parent=gene-LU631_RS20510;Dbxref=Genbank:WP_016190279.1;Name=WP_016190279.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026188.1;locus_tag=LU631_RS20510;product=transketolase;protein_id=WP_016190279.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3910703 3912048 . + . ID=gene-LU631_RS20515;Name=LU631_RS20515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20515;old_locus_tag=LU631_20515;pseudo=true NZ_CP089940.1 Protein Homology CDS 3910703 3912048 . + 0 ID=cds-LU631_RS20515;Parent=gene-LU631_RS20515;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS20515;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3912083 3913123 . - . ID=gene-LU631_RS20520;Name=LU631_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20520;old_locus_tag=LU631_20520 NZ_CP089940.1 Protein Homology CDS 3912083 3913123 . - 0 ID=cds-WP_046371791.1-19;Parent=gene-LU631_RS20520;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS20520;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3913614 3914549 . - . ID=gene-LU631_RS20525;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=LU631_RS20525;old_locus_tag=LU631_20525 NZ_CP089940.1 Protein Homology CDS 3913614 3914549 . - 0 ID=cds-WP_016190281.1;Parent=gene-LU631_RS20525;Dbxref=Genbank:WP_016190281.1;Name=WP_016190281.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374497.1;locus_tag=LU631_RS20525;product=agmatinase;protein_id=WP_016190281.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3914716 3916692 . - . ID=gene-LU631_RS20530;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=LU631_RS20530;old_locus_tag=LU631_20530 NZ_CP089940.1 Protein Homology CDS 3914716 3916692 . - 0 ID=cds-WP_016190282.1;Parent=gene-LU631_RS20530;Dbxref=Genbank:WP_016190282.1;Name=WP_016190282.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007752219.1;locus_tag=LU631_RS20530;product=biosynthetic arginine decarboxylase;protein_id=WP_016190282.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3917403 3918554 . + . ID=gene-LU631_RS20535;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=LU631_RS20535;old_locus_tag=LU631_20535 NZ_CP089940.1 Protein Homology CDS 3917403 3918554 . + 0 ID=cds-WP_016190283.1;Parent=gene-LU631_RS20535;Dbxref=Genbank:WP_016190283.1;Name=WP_016190283.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007370216.1;locus_tag=LU631_RS20535;product=methionine adenosyltransferase;protein_id=WP_016190283.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3918970 3920367 . + . ID=gene-LU631_RS20540;Name=LU631_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20540;old_locus_tag=LU631_20540 NZ_CP089940.1 Protein Homology CDS 3918970 3920367 . + 0 ID=cds-WP_016190284.1;Parent=gene-LU631_RS20540;Dbxref=Genbank:WP_016190284.1;Name=WP_016190284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203679.1;locus_tag=LU631_RS20540;product=sugar porter family MFS transporter;protein_id=WP_016190284.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3920437 3920961 . + . ID=gene-LU631_RS20545;Name=LU631_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20545;old_locus_tag=LU631_20545 NZ_CP089940.1 Protein Homology CDS 3920437 3920961 . + 0 ID=cds-WP_040465323.1;Parent=gene-LU631_RS20545;Dbxref=Genbank:WP_040465323.1;Name=WP_040465323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178441.1;locus_tag=LU631_RS20545;product=SprT family zinc-dependent metalloprotease;protein_id=WP_040465323.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3921067 3921780 . + . ID=gene-LU631_RS20550;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=LU631_RS20550;old_locus_tag=LU631_20550 NZ_CP089940.1 Protein Homology CDS 3921067 3921780 . + 0 ID=cds-WP_016190286.1;Parent=gene-LU631_RS20550;Dbxref=Genbank:WP_016190286.1;Name=WP_016190286.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539432.1;locus_tag=LU631_RS20550;product=deoxyribonuclease I;protein_id=WP_016190286.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3921855 3922586 . + . ID=gene-LU631_RS20555;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=LU631_RS20555;old_locus_tag=LU631_20555 NZ_CP089940.1 Protein Homology CDS 3921855 3922586 . + 0 ID=cds-WP_016190287.1;Parent=gene-LU631_RS20555;Dbxref=Genbank:WP_016190287.1;Name=WP_016190287.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=LU631_RS20555;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_016190287.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3922670 3923614 . + . ID=gene-LU631_RS20560;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=LU631_RS20560;old_locus_tag=LU631_20560 NZ_CP089940.1 Protein Homology CDS 3922670 3923614 . + 0 ID=cds-WP_016190288.1;Parent=gene-LU631_RS20560;Dbxref=Genbank:WP_016190288.1;Name=WP_016190288.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803492.1;locus_tag=LU631_RS20560;product=glutathione synthase;protein_id=WP_016190288.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3923708 3924271 . + . ID=gene-LU631_RS20565;Name=LU631_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20565;old_locus_tag=LU631_20565 NZ_CP089940.1 Protein Homology CDS 3923708 3924271 . + 0 ID=cds-WP_016190289.1;Parent=gene-LU631_RS20565;Dbxref=Genbank:WP_016190289.1;Name=WP_016190289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442535.1;locus_tag=LU631_RS20565;product=YqgE/AlgH family protein;protein_id=WP_016190289.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3924271 3924693 . + . ID=gene-LU631_RS20570;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=LU631_RS20570;old_locus_tag=LU631_20570 NZ_CP089940.1 Protein Homology CDS 3924271 3924693 . + 0 ID=cds-WP_016190290.1;Parent=gene-LU631_RS20570;Dbxref=Genbank:WP_016190290.1;Name=WP_016190290.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669219.1;locus_tag=LU631_RS20570;product=Holliday junction resolvase RuvX;protein_id=WP_016190290.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3924705 3925700 . - . ID=gene-LU631_RS20575;Name=LU631_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20575;old_locus_tag=LU631_20575 NZ_CP089940.1 Protein Homology CDS 3924705 3925700 . - 0 ID=cds-WP_016190291.1;Parent=gene-LU631_RS20575;Dbxref=Genbank:WP_016190291.1;Name=WP_016190291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358977.1;locus_tag=LU631_RS20575;product=type IV pilus twitching motility protein PilT;protein_id=WP_016190291.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3925715 3926422 . + . ID=gene-LU631_RS20580;Name=LU631_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20580;old_locus_tag=LU631_20580 NZ_CP089940.1 Protein Homology CDS 3925715 3926422 . + 0 ID=cds-WP_016190292.1;Parent=gene-LU631_RS20580;Dbxref=Genbank:WP_016190292.1;Name=WP_016190292.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203687.1;locus_tag=LU631_RS20580;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_016190292.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3926431 3926982 . + . ID=gene-LU631_RS20585;Name=LU631_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20585;old_locus_tag=LU631_20585 NZ_CP089940.1 Protein Homology CDS 3926431 3926982 . + 0 ID=cds-WP_016190293.1;Parent=gene-LU631_RS20585;Dbxref=Genbank:WP_016190293.1;Name=WP_016190293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007729627.1;locus_tag=LU631_RS20585;product=YggT family protein;protein_id=WP_016190293.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3927013 3927609 . + . ID=gene-LU631_RS20590;Name=LU631_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20590;old_locus_tag=LU631_20590 NZ_CP089940.1 Protein Homology CDS 3927013 3927609 . + 0 ID=cds-WP_016190294.1;Parent=gene-LU631_RS20590;Dbxref=Genbank:WP_016190294.1;Name=WP_016190294.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120856.1;locus_tag=LU631_RS20590;product=XTP/dITP diphosphatase;protein_id=WP_016190294.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3927602 3928762 . + . ID=gene-LU631_RS20595;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=LU631_RS20595;old_locus_tag=LU631_20595 NZ_CP089940.1 Protein Homology CDS 3927602 3928762 . + 0 ID=cds-WP_016190295.1;Parent=gene-LU631_RS20595;Dbxref=Genbank:WP_016190295.1;Name=WP_016190295.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203690.1;locus_tag=LU631_RS20595;product=radical SAM family heme chaperone HemW;protein_id=WP_016190295.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3928909 3929948 . + . ID=gene-LU631_RS20600;Name=LU631_RS20600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20600;old_locus_tag=LU631_20600;pseudo=true NZ_CP089940.1 Protein Homology CDS 3928909 3929948 . + 0 ID=cds-LU631_RS20600;Parent=gene-LU631_RS20600;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS20600;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3930009 3930728 . - . ID=gene-LU631_RS20605;Name=LU631_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20605;old_locus_tag=LU631_20605 NZ_CP089940.1 Protein Homology CDS 3930009 3930728 . - 0 ID=cds-WP_016190298.1;Parent=gene-LU631_RS20605;Dbxref=Genbank:WP_016190298.1;Name=WP_016190298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358982.1;locus_tag=LU631_RS20605;product=DUF2884 domain-containing protein;protein_id=WP_016190298.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3930794 3931120 . - . ID=gene-LU631_RS20610;Name=LU631_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20610;old_locus_tag=LU631_20610 NZ_CP089940.1 Protein Homology CDS 3930794 3931120 . - 0 ID=cds-WP_016190299.1;Parent=gene-LU631_RS20610;Dbxref=Genbank:WP_016190299.1;Name=WP_016190299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417434.4;locus_tag=LU631_RS20610;product=YggL family protein;protein_id=WP_016190299.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3931120 3931839 . - . ID=gene-LU631_RS20615;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=LU631_RS20615;old_locus_tag=LU631_20615 NZ_CP089940.1 Protein Homology CDS 3931120 3931839 . - 0 ID=cds-WP_016190300.1;Parent=gene-LU631_RS20615;Dbxref=Genbank:WP_016190300.1;Name=WP_016190300.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=LU631_RS20615;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_016190300.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3931991 3933070 . + . ID=gene-LU631_RS20620;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=LU631_RS20620;old_locus_tag=LU631_20620 NZ_CP089940.1 Protein Homology CDS 3931991 3933070 . + 0 ID=cds-WP_016190301.1;Parent=gene-LU631_RS20620;Dbxref=Genbank:WP_016190301.1;Name=WP_016190301.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203694.1;locus_tag=LU631_RS20620;product=A/G-specific adenine glycosylase;protein_id=WP_016190301.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3933083 3933355 . + . ID=gene-LU631_RS20625;Name=LU631_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20625;old_locus_tag=LU631_20625 NZ_CP089940.1 Protein Homology CDS 3933083 3933355 . + 0 ID=cds-WP_016190302.1;Parent=gene-LU631_RS20625;Dbxref=Genbank:WP_016190302.1;Name=WP_016190302.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442550.1;locus_tag=LU631_RS20625;product=oxidative damage protection protein;protein_id=WP_016190302.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3933407 3934486 . + . ID=gene-LU631_RS20630;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=LU631_RS20630;old_locus_tag=LU631_20630 NZ_CP089940.1 Protein Homology CDS 3933407 3934486 . + 0 ID=cds-WP_016190303.1;Parent=gene-LU631_RS20630;Dbxref=Genbank:WP_016190303.1;Name=WP_016190303.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120870.1;locus_tag=LU631_RS20630;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_016190303.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3934554 3935381 . - . ID=gene-LU631_RS20635;Name=LU631_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20635;old_locus_tag=LU631_20635 NZ_CP089940.1 Protein Homology CDS 3934554 3935381 . - 0 ID=cds-WP_016190304.1;Parent=gene-LU631_RS20635;Dbxref=Genbank:WP_016190304.1;Name=WP_016190304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203698.1;locus_tag=LU631_RS20635;product=phosphoenolpyruvate hydrolase family protein;protein_id=WP_016190304.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3935384 3936604 . - . ID=gene-LU631_RS20640;Name=LU631_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20640;old_locus_tag=LU631_20640 NZ_CP089940.1 Protein Homology CDS 3935384 3936604 . - 0 ID=cds-WP_016190305.1;Parent=gene-LU631_RS20640;Dbxref=Genbank:WP_016190305.1;Name=WP_016190305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203699.1;locus_tag=LU631_RS20640;product=Tm-1-like ATP-binding domain-containing protein;protein_id=WP_016190305.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3936845 3937501 . + . ID=gene-LU631_RS20645;Name=LU631_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20645;old_locus_tag=LU631_20645 NZ_CP089940.1 Protein Homology CDS 3936845 3937501 . + 0 ID=cds-WP_040465325.1;Parent=gene-LU631_RS20645;Dbxref=Genbank:WP_040465325.1;Name=WP_040465325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168528.1;locus_tag=LU631_RS20645;product=TetR/AcrR family transcriptional regulator;protein_id=WP_040465325.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3937536 3939680 . - . ID=gene-LU631_RS20650;Name=LU631_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20650;old_locus_tag=LU631_20650 NZ_CP089940.1 Protein Homology CDS 3937536 3939680 . - 0 ID=cds-WP_016190307.1;Parent=gene-LU631_RS20650;Dbxref=Genbank:WP_016190307.1;Name=WP_016190307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155423.1;locus_tag=LU631_RS20650;product=ornithine decarboxylase;protein_id=WP_016190307.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3940377 3941080 . + . ID=gene-LU631_RS20655;Name=LU631_RS20655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20655;old_locus_tag=LU631_20655;pseudo=true NZ_CP089940.1 Protein Homology CDS 3940377 3941080 . + 0 ID=cds-LU631_RS20655;Parent=gene-LU631_RS20655;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU631_RS20655;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3941939 3942970 . + . ID=gene-LU631_RS20660;Name=LU631_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20660;old_locus_tag=LU631_20660 NZ_CP089940.1 Protein Homology CDS 3941939 3942970 . + 0 ID=cds-WP_233481936.1;Parent=gene-LU631_RS20660;Dbxref=Genbank:WP_233481936.1;Name=WP_233481936.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU631_RS20660;product=IS91 family transposase;protein_id=WP_233481936.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3942948 3943163 . + . ID=gene-LU631_RS20665;Name=LU631_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20665;old_locus_tag=LU631_20665 NZ_CP089940.1 GeneMarkS-2+ CDS 3942948 3943163 . + 0 ID=cds-WP_233481937.1;Parent=gene-LU631_RS20665;Dbxref=Genbank:WP_233481937.1;Name=WP_233481937.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20665;product=hypothetical protein;protein_id=WP_233481937.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3943966 3944625 . + . ID=gene-LU631_RS20670;Name=LU631_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20670;old_locus_tag=LU631_20670 NZ_CP089940.1 GeneMarkS-2+ CDS 3943966 3944625 . + 0 ID=cds-WP_016190308.1;Parent=gene-LU631_RS20670;Dbxref=Genbank:WP_016190308.1;Name=WP_016190308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20670;product=hypothetical protein;protein_id=WP_016190308.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3944626 3944865 . - . ID=gene-LU631_RS20675;Name=LU631_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20675;old_locus_tag=LU631_20675 NZ_CP089940.1 GeneMarkS-2+ CDS 3944626 3944865 . - 0 ID=cds-WP_016190309.1;Parent=gene-LU631_RS20675;Dbxref=Genbank:WP_016190309.1;Name=WP_016190309.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20675;product=hypothetical protein;protein_id=WP_016190309.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3945086 3945247 . - . ID=gene-LU631_RS20680;Name=LU631_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20680;old_locus_tag=LU631_20680 NZ_CP089940.1 Protein Homology CDS 3945086 3945247 . - 0 ID=cds-WP_071598870.1;Parent=gene-LU631_RS20680;Dbxref=Genbank:WP_071598870.1;Name=WP_071598870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001323484.1;locus_tag=LU631_RS20680;product=MbeD family mobilization/exclusion protein;protein_id=WP_071598870.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3945633 3945773 . + . ID=gene-LU631_RS20685;Name=LU631_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20685;old_locus_tag=LU631_20685 NZ_CP089940.1 GeneMarkS-2+ CDS 3945633 3945773 . + 0 ID=cds-WP_161796965.1-19;Parent=gene-LU631_RS20685;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20685;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3945782 3946996 . + . ID=gene-LU631_RS20690;Name=LU631_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20690;old_locus_tag=LU631_20690 NZ_CP089940.1 Protein Homology CDS 3945782 3946996 . + 0 ID=cds-WP_046371879.1-19;Parent=gene-LU631_RS20690;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS20690;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3947148 3948539 . + . ID=gene-LU631_RS20695;Name=LU631_RS20695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20695;old_locus_tag=LU631_20695;partial=true;pseudo=true;start_range=.,3947148 NZ_CP089940.1 Protein Homology CDS 3947148 3948539 . + 0 ID=cds-LU631_RS20695;Parent=gene-LU631_RS20695;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117884.1;locus_tag=LU631_RS20695;partial=true;product=terminase family protein;pseudo=true;start_range=.,3947148;transl_table=11 NZ_CP089940.1 RefSeq gene 3948539 3949597 . + . ID=gene-LU631_RS20700;Name=LU631_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20700;old_locus_tag=LU631_20700 NZ_CP089940.1 Protein Homology CDS 3948539 3949597 . + 0 ID=cds-WP_046371980.1;Parent=gene-LU631_RS20700;Dbxref=Genbank:WP_046371980.1;Name=WP_046371980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072483.1;locus_tag=LU631_RS20700;product=phage portal protein;protein_id=WP_046371980.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3949668 3950171 . - . ID=gene-LU631_RS20705;Name=LU631_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20705;old_locus_tag=LU631_20705 NZ_CP089940.1 GeneMarkS-2+ CDS 3949668 3950171 . - 0 ID=cds-WP_016193219.1-4;Parent=gene-LU631_RS20705;Dbxref=Genbank:WP_016193219.1;Name=WP_016193219.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20705;product=hypothetical protein;protein_id=WP_016193219.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3950581 3950964 . - . ID=gene-LU631_RS20710;Name=LU631_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20710;old_locus_tag=LU631_20710 NZ_CP089940.1 Protein Homology CDS 3950581 3950964 . - 0 ID=cds-WP_046371846.1-3;Parent=gene-LU631_RS20710;Dbxref=Genbank:WP_046371846.1;Name=WP_046371846.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117882.1;locus_tag=LU631_RS20710;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_046371846.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3950961 3951182 . - . ID=gene-LU631_RS20715;Name=LU631_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20715;old_locus_tag=LU631_20715 NZ_CP089940.1 Protein Homology CDS 3950961 3951182 . - 0 ID=cds-WP_006117881.1-3;Parent=gene-LU631_RS20715;Dbxref=Genbank:WP_006117881.1;Name=WP_006117881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016941532.1;locus_tag=LU631_RS20715;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_006117881.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3951249 3951944 . - . ID=gene-LU631_RS20720;Name=LU631_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20720;old_locus_tag=LU631_20720 NZ_CP089940.1 Protein Homology CDS 3951249 3951944 . - 0 ID=cds-WP_046371847.1-3;Parent=gene-LU631_RS20720;Dbxref=Genbank:WP_046371847.1;Name=WP_046371847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155224.1;locus_tag=LU631_RS20720;product=DNA methylase;protein_id=WP_046371847.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3952194 3952553 . - . ID=gene-LU631_RS20725;Name=LU631_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20725;old_locus_tag=LU631_20725 NZ_CP089940.1 Protein Homology CDS 3952194 3952553 . - 0 ID=cds-WP_046371849.1-4;Parent=gene-LU631_RS20725;Dbxref=Genbank:WP_046371849.1;Name=WP_046371849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181489.1;locus_tag=LU631_RS20725;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_046371849.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3952573 3952839 . - . ID=gene-LU631_RS20730;Name=LU631_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20730;old_locus_tag=LU631_20730 NZ_CP089940.1 GeneMarkS-2+ CDS 3952573 3952839 . - 0 ID=cds-WP_046371850.1-4;Parent=gene-LU631_RS20730;Dbxref=Genbank:WP_046371850.1;Name=WP_046371850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20730;product=hypothetical protein;protein_id=WP_046371850.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3952805 3955300 . - . ID=gene-LU631_RS20735;Name=LU631_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20735;old_locus_tag=LU631_20735 NZ_CP089940.1 Protein Homology CDS 3952805 3955300 . - 0 ID=cds-WP_052734703.1;Parent=gene-LU631_RS20735;Dbxref=Genbank:WP_052734703.1;Name=WP_052734703.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015871545.1;locus_tag=LU631_RS20735;product=replication endonuclease;protein_id=WP_052734703.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3955300 3955683 . - . ID=gene-LU631_RS20740;Name=LU631_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20740;old_locus_tag=LU631_20740 NZ_CP089940.1 GeneMarkS-2+ CDS 3955300 3955683 . - 0 ID=cds-WP_046371981.1;Parent=gene-LU631_RS20740;Dbxref=Genbank:WP_046371981.1;Name=WP_046371981.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20740;product=hypothetical protein;protein_id=WP_046371981.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3955756 3955998 . - . ID=gene-LU631_RS20745;Name=LU631_RS20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20745;old_locus_tag=LU631_20745 NZ_CP089940.1 GeneMarkS-2+ CDS 3955756 3955998 . - 0 ID=cds-WP_016193223.1-4;Parent=gene-LU631_RS20745;Dbxref=Genbank:WP_016193223.1;Name=WP_016193223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20745;product=hypothetical protein;protein_id=WP_016193223.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3956046 3956312 . - . ID=gene-LU631_RS20750;Name=LU631_RS20750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20750;old_locus_tag=LU631_20750;partial=true;pseudo=true;start_range=.,3956046 NZ_CP089940.1 Protein Homology CDS 3956046 3956312 . - 0 ID=cds-LU631_RS20750;Parent=gene-LU631_RS20750;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022029.2;locus_tag=LU631_RS20750;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3956046;transl_table=11 NZ_CP089940.1 RefSeq gene 3956330 3956536 . - . ID=gene-LU631_RS20755;Name=LU631_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20755;old_locus_tag=LU631_20755 NZ_CP089940.1 GeneMarkS-2+ CDS 3956330 3956536 . - 0 ID=cds-WP_016193242.1-4;Parent=gene-LU631_RS20755;Dbxref=Genbank:WP_016193242.1;Name=WP_016193242.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20755;product=hypothetical protein;protein_id=WP_016193242.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3956533 3957375 . - . ID=gene-LU631_RS20760;Name=LU631_RS20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20760;old_locus_tag=LU631_20760 NZ_CP089940.1 Protein Homology CDS 3956533 3957375 . - 0 ID=cds-WP_016193243.1-4;Parent=gene-LU631_RS20760;Dbxref=Genbank:WP_016193243.1;Name=WP_016193243.1;Ontology_term=GO:0006306,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117877.1;locus_tag=LU631_RS20760;product=Dam family site-specific DNA-(adenine-N6)-methyltransferase;protein_id=WP_016193243.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3957372 3957944 . - . ID=gene-LU631_RS20765;Name=LU631_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20765;old_locus_tag=LU631_20765 NZ_CP089940.1 Protein Homology CDS 3957372 3957944 . - 0 ID=cds-WP_016193244.1-4;Parent=gene-LU631_RS20765;Dbxref=Genbank:WP_016193244.1;Name=WP_016193244.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027788.2;locus_tag=LU631_RS20765;product=3'-5' exonuclease;protein_id=WP_016193244.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3958014 3958406 . - . ID=gene-LU631_RS20770;Name=LU631_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20770;old_locus_tag=LU631_20770 NZ_CP089940.1 Protein Homology CDS 3958014 3958406 . - 0 ID=cds-WP_040465952.1-4;Parent=gene-LU631_RS20770;Dbxref=Genbank:WP_040465952.1;Name=WP_040465952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001514713.1;locus_tag=LU631_RS20770;product=hypothetical protein;protein_id=WP_040465952.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3958576 3958812 . - . ID=gene-LU631_RS20775;Name=LU631_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20775;old_locus_tag=LU631_20775 NZ_CP089940.1 GeneMarkS-2+ CDS 3958576 3958812 . - 0 ID=cds-WP_040465953.1-4;Parent=gene-LU631_RS20775;Dbxref=Genbank:WP_040465953.1;Name=WP_040465953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20775;product=hypothetical protein;protein_id=WP_040465953.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3959150 3959389 . - . ID=gene-LU631_RS20780;Name=LU631_RS20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20780;old_locus_tag=LU631_20780 NZ_CP089940.1 Protein Homology CDS 3959150 3959389 . - 0 ID=cds-WP_016193245.1-4;Parent=gene-LU631_RS20780;Dbxref=Genbank:WP_016193245.1;Name=WP_016193245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201494.1;locus_tag=LU631_RS20780;product=hypothetical protein;protein_id=WP_016193245.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3959358 3959540 . - . ID=gene-LU631_RS20785;Name=LU631_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20785;old_locus_tag=LU631_20785 NZ_CP089940.1 GeneMarkS-2+ CDS 3959358 3959540 . - 0 ID=cds-WP_016193246.1;Parent=gene-LU631_RS20785;Dbxref=Genbank:WP_016193246.1;Name=WP_016193246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20785;product=hypothetical protein;protein_id=WP_016193246.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3959772 3960203 . - . ID=gene-LU631_RS20790;Name=LU631_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20790;old_locus_tag=LU631_20790 NZ_CP089940.1 GeneMarkS-2+ CDS 3959772 3960203 . - 0 ID=cds-WP_233481908.1-4;Parent=gene-LU631_RS20790;Dbxref=Genbank:WP_233481908.1;Name=WP_233481908.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20790;product=hypothetical protein;protein_id=WP_233481908.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3960309 3960590 . + . ID=gene-LU631_RS20795;Name=LU631_RS20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20795;old_locus_tag=LU631_20795 NZ_CP089940.1 Protein Homology CDS 3960309 3960590 . + 0 ID=cds-WP_046372033.1;Parent=gene-LU631_RS20795;Dbxref=Genbank:WP_046372033.1;Name=WP_046372033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536686.1;locus_tag=LU631_RS20795;product=helix-turn-helix transcriptional regulator;protein_id=WP_046372033.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3960675 3961694 . + . ID=gene-LU631_RS20800;Name=LU631_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20800;old_locus_tag=LU631_20800 NZ_CP089940.1 Protein Homology CDS 3960675 3961694 . + 0 ID=cds-WP_046371854.1-3;Parent=gene-LU631_RS20800;Dbxref=Genbank:WP_046371854.1;Name=WP_046371854.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017371518.1;locus_tag=LU631_RS20800;product=tyrosine-type recombinase/integrase;protein_id=WP_046371854.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3961805 3962113 . - . ID=gene-LU631_RS20805;Name=LU631_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20805;old_locus_tag=LU631_20805 NZ_CP089940.1 Protein Homology CDS 3961805 3962113 . - 0 ID=cds-WP_016193234.1;Parent=gene-LU631_RS20805;Dbxref=Genbank:WP_016193234.1;Name=WP_016193234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542412.1;locus_tag=LU631_RS20805;product=hypothetical protein;protein_id=WP_016193234.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3962718 3963278 . - . ID=gene-LU631_RS20810;Name=LU631_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20810;old_locus_tag=LU631_20810 NZ_CP089940.1 Protein Homology CDS 3962718 3963278 . - 0 ID=cds-WP_016193233.1;Parent=gene-LU631_RS20810;Dbxref=Genbank:WP_016193233.1;Name=WP_016193233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097657.1;locus_tag=LU631_RS20810;product=hypothetical protein;protein_id=WP_016193233.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3963587 3964497 . - . ID=gene-LU631_RS20815;Name=LU631_RS20815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20815;old_locus_tag=LU631_20815;pseudo=true NZ_CP089940.1 Protein Homology CDS 3963587 3964497 . - 0 ID=cds-LU631_RS20815;Parent=gene-LU631_RS20815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012988007.1;locus_tag=LU631_RS20815;product=integrase domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3965482 3966654 . - . ID=gene-LU631_RS20820;Name=LU631_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20820;old_locus_tag=LU631_20820 NZ_CP089940.1 GeneMarkS-2+ CDS 3965482 3966654 . - 0 ID=cds-WP_232426941.1;Parent=gene-LU631_RS20820;Dbxref=Genbank:WP_232426941.1;Name=WP_232426941.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20820;product=hypothetical protein;protein_id=WP_232426941.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3966899 3967186 . + . ID=gene-LU631_RS20825;Name=LU631_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20825;old_locus_tag=LU631_20825 NZ_CP089940.1 Protein Homology CDS 3966899 3967186 . + 0 ID=cds-WP_016193230.1;Parent=gene-LU631_RS20825;Dbxref=Genbank:WP_016193230.1;Name=WP_016193230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105559.1;locus_tag=LU631_RS20825;product=hypothetical protein;protein_id=WP_016193230.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3967224 3968483 . - . ID=gene-LU631_RS20830;Name=LU631_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20830;old_locus_tag=LU631_20830 NZ_CP089940.1 Protein Homology CDS 3967224 3968483 . - 0 ID=cds-WP_046372034.1;Parent=gene-LU631_RS20830;Dbxref=Genbank:WP_046372034.1;Name=WP_046372034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000123102.1;locus_tag=LU631_RS20830;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=WP_046372034.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3968494 3968829 . - . ID=gene-LU631_RS20835;Name=LU631_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20835;old_locus_tag=LU631_20835 NZ_CP089940.1 Protein Homology CDS 3968494 3968829 . - 0 ID=cds-WP_016192757.1-2;Parent=gene-LU631_RS20835;Dbxref=Genbank:WP_016192757.1;Name=WP_016192757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095183.1;locus_tag=LU631_RS20835;product=hypothetical protein;protein_id=WP_016192757.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3968831 3970249 . - . ID=gene-LU631_RS20840;Name=LU631_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20840;old_locus_tag=LU631_20840 NZ_CP089940.1 Protein Homology CDS 3968831 3970249 . - 0 ID=cds-WP_016192758.1;Parent=gene-LU631_RS20840;Dbxref=Genbank:WP_016192758.1;Name=WP_016192758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000709002.1;locus_tag=LU631_RS20840;product=integrating conjugative element protein;protein_id=WP_016192758.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3970261 3971232 . - . ID=gene-LU631_RS20845;Name=LU631_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20845;old_locus_tag=LU631_20845 NZ_CP089940.1 Protein Homology CDS 3970261 3971232 . - 0 ID=cds-WP_016192759.1-2;Parent=gene-LU631_RS20845;Dbxref=Genbank:WP_016192759.1;Name=WP_016192759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372625.1;locus_tag=LU631_RS20845;product=TIGR03756 family integrating conjugative element protein;protein_id=WP_016192759.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3971229 3971633 . - . ID=gene-LU631_RS20850;Name=LU631_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20850;old_locus_tag=LU631_20850 NZ_CP089940.1 Protein Homology CDS 3971229 3971633 . - 0 ID=cds-WP_016192760.1-2;Parent=gene-LU631_RS20850;Dbxref=Genbank:WP_016192760.1;Name=WP_016192760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000783740.1;locus_tag=LU631_RS20850;product=TIGR03757 family integrating conjugative element protein;protein_id=WP_016192760.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3971804 3972424 . - . ID=gene-LU631_RS20855;Name=LU631_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20855;old_locus_tag=LU631_20855 NZ_CP089940.1 GeneMarkS-2+ CDS 3971804 3972424 . - 0 ID=cds-WP_046372035.1;Parent=gene-LU631_RS20855;Dbxref=Genbank:WP_046372035.1;Name=WP_046372035.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20855;product=hypothetical protein;protein_id=WP_046372035.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3972387 3973247 . - . ID=gene-LU631_RS20860;Name=LU631_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20860;old_locus_tag=LU631_20860 NZ_CP089940.1 Protein Homology CDS 3972387 3973247 . - 0 ID=cds-WP_233481938.1;Parent=gene-LU631_RS20860;Dbxref=Genbank:WP_233481938.1;Name=WP_233481938.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024977.2;locus_tag=LU631_RS20860;product=ATP-binding protein;protein_id=WP_233481938.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3973585 3974625 . - . ID=gene-LU631_RS20865;Name=LU631_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20865;old_locus_tag=LU631_20865 NZ_CP089940.1 Protein Homology CDS 3973585 3974625 . - 0 ID=cds-WP_046372036.1;Parent=gene-LU631_RS20865;Dbxref=Genbank:WP_046372036.1;Name=WP_046372036.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS20865;product=IS481 family transposase;protein_id=WP_046372036.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3974736 3975410 . + . ID=gene-LU631_RS20870;Name=LU631_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20870;old_locus_tag=LU631_20870 NZ_CP089940.1 Protein Homology CDS 3974736 3975410 . + 0 ID=cds-WP_233481939.1;Parent=gene-LU631_RS20870;Dbxref=Genbank:WP_233481939.1;Name=WP_233481939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009637758.1;locus_tag=LU631_RS20870;product=hypothetical protein;protein_id=WP_233481939.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3975426 3975845 . + . ID=gene-LU631_RS20875;Name=LU631_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20875;old_locus_tag=LU631_20875 NZ_CP089940.1 GeneMarkS-2+ CDS 3975426 3975845 . + 0 ID=cds-WP_046372037.1;Parent=gene-LU631_RS20875;Dbxref=Genbank:WP_046372037.1;Name=WP_046372037.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20875;product=hypothetical protein;protein_id=WP_046372037.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3975930 3976334 . - . ID=gene-LU631_RS20880;Name=LU631_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20880;old_locus_tag=LU631_20880 NZ_CP089940.1 Protein Homology CDS 3975930 3976334 . - 0 ID=cds-WP_016192058.1;Parent=gene-LU631_RS20880;Dbxref=Genbank:WP_016192058.1;Name=WP_016192058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192058.1;locus_tag=LU631_RS20880;product=hypothetical protein;protein_id=WP_016192058.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3976331 3979143 . - . ID=gene-LU631_RS20885;Name=LU631_RS20885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20885;old_locus_tag=LU631_20885;pseudo=true NZ_CP089940.1 Protein Homology CDS 3976331 3979143 . - 0 ID=cds-LU631_RS20885;Parent=gene-LU631_RS20885;Note=frameshifted;Ontology_term=GO:0008150,GO:0005524,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=ATP binding|0005524||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012822421.1;locus_tag=LU631_RS20885;product=conjugative transfer ATPase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3979143 3979547 . - . ID=gene-LU631_RS20890;Name=LU631_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20890;old_locus_tag=LU631_20890 NZ_CP089940.1 Protein Homology CDS 3979143 3979547 . - 0 ID=cds-WP_016192002.1;Parent=gene-LU631_RS20890;Dbxref=Genbank:WP_016192002.1;Name=WP_016192002.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193250.1;locus_tag=LU631_RS20890;product=TIGR03751 family conjugal transfer lipoprotein;protein_id=WP_016192002.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3979534 3979794 . - . ID=gene-LU631_RS20895;Name=LU631_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20895;old_locus_tag=LU631_20895 NZ_CP089940.1 Protein Homology CDS 3979534 3979794 . - 0 ID=cds-WP_152664198.1;Parent=gene-LU631_RS20895;Dbxref=Genbank:WP_152664198.1;Name=WP_152664198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193251.1;locus_tag=LU631_RS20895;product=hypothetical protein;protein_id=WP_152664198.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3979939 3980178 . - . ID=gene-LU631_RS20900;Name=LU631_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20900;old_locus_tag=LU631_20900 NZ_CP089940.1 Protein Homology CDS 3979939 3980178 . - 0 ID=cds-WP_232426902.1;Parent=gene-LU631_RS20900;Dbxref=Genbank:WP_232426902.1;Name=WP_232426902.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: protein motif:HMM:TIGR03758.1;locus_tag=LU631_RS20900;product=TIGR03758 family integrating conjugative element protein;protein_id=WP_232426902.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3980175 3980478 . - . ID=gene-LU631_RS20905;Name=LU631_RS20905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20905;old_locus_tag=LU631_20905;pseudo=true NZ_CP089940.1 Protein Homology CDS 3980175 3980478 . - 0 ID=cds-LU631_RS20905;Parent=gene-LU631_RS20905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542427.1;locus_tag=LU631_RS20905;product=RAQPRD family integrative conjugative element protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3980786 3981289 . - . ID=gene-LU631_RS20910;Name=LU631_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20910;old_locus_tag=LU631_20910 NZ_CP089940.1 Protein Homology CDS 3980786 3981289 . - 0 ID=cds-WP_046371978.1-2;Parent=gene-LU631_RS20910;Dbxref=Genbank:WP_046371978.1;Name=WP_046371978.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU631_RS20910;product=IS1 family transposase;protein_id=WP_046371978.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3981208 3981483 . - . ID=gene-LU631_RS20915;Name=LU631_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20915;old_locus_tag=LU631_20915 NZ_CP089940.1 Protein Homology CDS 3981208 3981483 . - 0 ID=cds-WP_072052824.1;Parent=gene-LU631_RS20915;Dbxref=Genbank:WP_072052824.1;Name=WP_072052824.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU631_RS20915;product=IS1-like element transposase;protein_id=WP_072052824.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3981515 3981778 . - . ID=gene-LU631_RS20920;Name=LU631_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20920;old_locus_tag=LU631_20920 NZ_CP089940.1 GeneMarkS-2+ CDS 3981515 3981778 . - 0 ID=cds-WP_046372289.1;Parent=gene-LU631_RS20920;Dbxref=Genbank:WP_046372289.1;Name=WP_046372289.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20920;product=hypothetical protein;protein_id=WP_046372289.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3982277 3982552 . - . ID=gene-LU631_RS20925;Name=LU631_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20925;old_locus_tag=LU631_20925 NZ_CP089940.1 Protein Homology CDS 3982277 3982552 . - 0 ID=cds-WP_016192006.1;Parent=gene-LU631_RS20925;Dbxref=Genbank:WP_016192006.1;Name=WP_016192006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151481.1;locus_tag=LU631_RS20925;product=hypothetical protein;protein_id=WP_016192006.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3982695 3982844 . - . ID=gene-LU631_RS20930;Name=LU631_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20930;old_locus_tag=LU631_20930 NZ_CP089940.1 GeneMarkS-2+ CDS 3982695 3982844 . - 0 ID=cds-WP_016192007.1;Parent=gene-LU631_RS20930;Dbxref=Genbank:WP_016192007.1;Name=WP_016192007.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS20930;product=hypothetical protein;protein_id=WP_016192007.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3983190 3983681 . - . ID=gene-LU631_RS20935;Name=tssD;gbkey=Gene;gene=tssD;gene_biotype=protein_coding;locus_tag=LU631_RS20935;old_locus_tag=LU631_20935 NZ_CP089940.1 Protein Homology CDS 3983190 3983681 . - 0 ID=cds-WP_016192008.1;Parent=gene-LU631_RS20935;Dbxref=Genbank:WP_016192008.1;Name=WP_016192008.1;Ontology_term=GO:0003674;gbkey=CDS;gene=tssD;go_function=molecular_function|0003674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902160.1;locus_tag=LU631_RS20935;product=type VI secretion system tube protein TssD;protein_id=WP_016192008.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3983923 3984441 . - . ID=gene-LU631_RS20940;Name=LU631_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20940;old_locus_tag=LU631_20940 NZ_CP089940.1 Protein Homology CDS 3983923 3984441 . - 0 ID=cds-WP_016192010.1;Parent=gene-LU631_RS20940;Dbxref=Genbank:WP_016192010.1;Name=WP_016192010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012969062.1;locus_tag=LU631_RS20940;product=DUF2778 domain-containing protein;protein_id=WP_016192010.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3984951 3985643 . + . ID=gene-LU631_RS20945;Name=LU631_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20945;old_locus_tag=LU631_20945 NZ_CP089940.1 Protein Homology CDS 3984951 3985643 . + 0 ID=cds-WP_016192012.1;Parent=gene-LU631_RS20945;Dbxref=Genbank:WP_016192012.1;Name=WP_016192012.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015076.2;locus_tag=LU631_RS20945;product=replication initiation protein;protein_id=WP_016192012.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3985640 3985888 . + . ID=gene-LU631_RS20950;Name=LU631_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20950;old_locus_tag=LU631_20950 NZ_CP089940.1 Protein Homology CDS 3985640 3985888 . + 0 ID=cds-WP_016192013.1;Parent=gene-LU631_RS20950;Dbxref=Genbank:WP_016192013.1;Name=WP_016192013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240319.1;locus_tag=LU631_RS20950;product=hypothetical protein;protein_id=WP_016192013.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3986038 3986241 . - . ID=gene-LU631_RS20955;Name=LU631_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20955;old_locus_tag=LU631_20955 NZ_CP089940.1 Protein Homology CDS 3986038 3986241 . - 0 ID=cds-WP_016192014.1;Parent=gene-LU631_RS20955;Dbxref=Genbank:WP_016192014.1;Name=WP_016192014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240318.1;locus_tag=LU631_RS20955;product=AlpA family transcriptional regulator;protein_id=WP_016192014.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3986819 3987828 . - . ID=gene-LU631_RS20960;Name=LU631_RS20960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20960;old_locus_tag=LU631_20960;pseudo=true NZ_CP089940.1 Protein Homology CDS 3986819 3987828 . - 0 ID=cds-LU631_RS20960;Parent=gene-LU631_RS20960;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869818.1;locus_tag=LU631_RS20960;product=site-specific integrase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3987877 3989514 . - . ID=gene-LU631_RS20965;Name=LU631_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20965;old_locus_tag=LU631_20965 NZ_CP089940.1 Protein Homology CDS 3987877 3989514 . - 0 ID=cds-WP_232426892.1;Parent=gene-LU631_RS20965;Dbxref=Genbank:WP_232426892.1;Name=WP_232426892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190740.1;locus_tag=LU631_RS20965;product=TraI domain-containing protein;protein_id=WP_232426892.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3989490 3990244 . - . ID=gene-LU631_RS20970;Name=LU631_RS20970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20970;old_locus_tag=LU631_20970;pseudo=true NZ_CP089940.1 Protein Homology CDS 3989490 3990244 . - 0 ID=cds-LU631_RS20970;Parent=gene-LU631_RS20970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016151382.1;locus_tag=LU631_RS20970;product=ATP-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3990652 3991745 . + . ID=gene-LU631_RS20975;Name=LU631_RS20975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20975;old_locus_tag=LU631_20975;pseudo=true NZ_CP089940.1 Protein Homology CDS 3990652 3991745 . + 0 ID=cds-LU631_RS20975;Parent=gene-LU631_RS20975;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611429.1;locus_tag=LU631_RS20975;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 3991752 3993074 . - . ID=gene-LU631_RS20980;Name=LU631_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20980;old_locus_tag=LU631_20980 NZ_CP089940.1 Protein Homology CDS 3991752 3993074 . - 0 ID=cds-WP_046371900.1-5;Parent=gene-LU631_RS20980;Dbxref=Genbank:WP_046371900.1;Name=WP_046371900.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS20980;product=IS4 family transposase;protein_id=WP_046371900.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3993146 3993268 . + . ID=gene-LU631_RS20985;Name=LU631_RS20985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS20985;old_locus_tag=LU631_20985;partial=true;pseudo=true;start_range=.,3993146 NZ_CP089940.1 Protein Homology CDS 3993146 3993268 . + 0 ID=cds-LU631_RS20985;Parent=gene-LU631_RS20985;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802959.1;locus_tag=LU631_RS20985;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,3993146;transl_table=11 NZ_CP089940.1 RefSeq gene 3993829 3995547 . + . ID=gene-LU631_RS20990;Name=LU631_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20990;old_locus_tag=LU631_20990 NZ_CP089940.1 Protein Homology CDS 3993829 3995547 . + 0 ID=cds-WP_232426893.1;Parent=gene-LU631_RS20990;Dbxref=Genbank:WP_232426893.1;Name=WP_232426893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014914217.1;locus_tag=LU631_RS20990;product=polysaccharide lyase family protein;protein_id=WP_232426893.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3995765 3996508 . + . ID=gene-LU631_RS20995;Name=LU631_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS20995;old_locus_tag=LU631_20995 NZ_CP089940.1 Protein Homology CDS 3995765 3996508 . + 0 ID=cds-WP_016192019.1;Parent=gene-LU631_RS20995;Dbxref=Genbank:WP_016192019.1;Name=WP_016192019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010256466.1;locus_tag=LU631_RS20995;product=KdgM family transporter;protein_id=WP_016192019.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 3996854 3997369 . - . ID=gene-LU631_RS21000;Name=LU631_RS21000;end_range=3997369,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21000;old_locus_tag=LU631_21000;partial=true;pseudo=true;start_range=.,3996854 NZ_CP089940.1 Protein Homology CDS 3996854 3997369 . - 0 ID=cds-LU631_RS21000;Parent=gene-LU631_RS21000;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3997369,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007755838.1;locus_tag=LU631_RS21000;partial=true;product=2-isopropylmalate synthase;pseudo=true;start_range=.,3996854;transl_table=11 NZ_CP089940.1 RefSeq gene 3997868 3998407 . - . ID=gene-LU631_RS21005;Name=LU631_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21005;old_locus_tag=LU631_21005 NZ_CP089940.1 Protein Homology CDS 3997868 3998407 . - 0 ID=cds-WP_016192021.1;Parent=gene-LU631_RS21005;Dbxref=Genbank:WP_016192021.1;Name=WP_016192021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013319109.1;locus_tag=LU631_RS21005;product=ankyrin repeat domain-containing protein;protein_id=WP_016192021.1;transl_table=11 NZ_CP089940.1 RefSeq gene 3998469 3999935 . - . ID=gene-LU631_RS21010;Name=katB;gbkey=Gene;gene=katB;gene_biotype=protein_coding;locus_tag=LU631_RS21010;old_locus_tag=LU631_21010 NZ_CP089940.1 Protein Homology CDS 3998469 3999935 . - 0 ID=cds-WP_198292540.1;Parent=gene-LU631_RS21010;Dbxref=Genbank:WP_198292540.1;Name=WP_198292540.1;gbkey=CDS;gene=katB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008109957.1;locus_tag=LU631_RS21010;product=catalase KatB;protein_id=WP_198292540.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4000813 4001295 . - . ID=gene-LU631_RS21015;Name=LU631_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21015;old_locus_tag=LU631_21015 NZ_CP089940.1 Protein Homology CDS 4000813 4001295 . - 0 ID=cds-WP_016192024.1;Parent=gene-LU631_RS21015;Dbxref=Genbank:WP_016192024.1;Name=WP_016192024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001398221.1;locus_tag=LU631_RS21015;product=transglycosylase SLT domain-containing protein;protein_id=WP_016192024.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4002661 4003854 . + . ID=gene-LU631_RS21020;Name=LU631_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21020;old_locus_tag=LU631_21020 NZ_CP089940.1 GeneMarkS-2+ CDS 4002661 4003854 . + 0 ID=cds-WP_157275252.1;Parent=gene-LU631_RS21020;Dbxref=Genbank:WP_157275252.1;Name=WP_157275252.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS21020;product=hypothetical protein;protein_id=WP_157275252.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4004304 4005344 . - . ID=gene-LU631_RS21025;Name=LU631_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21025;old_locus_tag=LU631_21025 NZ_CP089940.1 Protein Homology CDS 4004304 4005344 . - 0 ID=cds-WP_046371791.1-20;Parent=gene-LU631_RS21025;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS21025;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4005511 4005942 . - . ID=gene-LU631_RS26210;Name=LU631_RS26210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26210 NZ_CP089940.1 Protein Homology CDS 4005511 4005942 . - 0 ID=cds-WP_046372013.1-8;Parent=gene-LU631_RS26210;Dbxref=Genbank:WP_046372013.1;Name=WP_046372013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26210;product=IS91 family transposase;protein_id=WP_046372013.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4005954 4006724 . - . ID=gene-LU631_RS26215;Name=LU631_RS26215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26215 NZ_CP089940.1 Protein Homology CDS 4005954 4006724 . - 0 ID=cds-WP_267921497.1-9;Parent=gene-LU631_RS26215;Dbxref=Genbank:WP_267921497.1;Name=WP_267921497.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26215;product=transposase zinc-binding domain-containing protein;protein_id=WP_267921497.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4006733 4006873 . - . ID=gene-LU631_RS21035;Name=LU631_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21035;old_locus_tag=LU631_21035 NZ_CP089940.1 GeneMarkS-2+ CDS 4006733 4006873 . - 0 ID=cds-WP_161796965.1-20;Parent=gene-LU631_RS21035;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS21035;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4007909 4008421 . + . ID=gene-LU631_RS21040;Name=LU631_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21040;old_locus_tag=LU631_21040 NZ_CP089940.1 Protein Homology CDS 4007909 4008421 . + 0 ID=cds-WP_016192027.1;Parent=gene-LU631_RS21040;Dbxref=Genbank:WP_016192027.1;Name=WP_016192027.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF014376.2;locus_tag=LU631_RS21040;product=AraC family ligand binding domain-containing protein;protein_id=WP_016192027.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4009082 4009261 . + . ID=gene-LU631_RS21045;Name=LU631_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21045;old_locus_tag=LU631_21045 NZ_CP089940.1 GeneMarkS-2+ CDS 4009082 4009261 . + 0 ID=cds-WP_232426894.1;Parent=gene-LU631_RS21045;Dbxref=Genbank:WP_232426894.1;Name=WP_232426894.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS21045;product=hypothetical protein;protein_id=WP_232426894.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4009286 4009630 . + . ID=gene-LU631_RS21050;Name=LU631_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21050;old_locus_tag=LU631_21050 NZ_CP089940.1 Protein Homology CDS 4009286 4009630 . + 0 ID=cds-WP_232426895.1;Parent=gene-LU631_RS21050;Dbxref=Genbank:WP_232426895.1;Name=WP_232426895.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021527.2;locus_tag=LU631_RS21050;product=2OG-Fe dioxygenase family protein;protein_id=WP_232426895.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4009791 4010681 . + . ID=gene-LU631_RS21055;Name=LU631_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21055;old_locus_tag=LU631_21055 NZ_CP089940.1 Protein Homology CDS 4009791 4010681 . + 0 ID=cds-WP_046372039.1;Parent=gene-LU631_RS21055;Dbxref=Genbank:WP_046372039.1;Name=WP_046372039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667897.1;locus_tag=LU631_RS21055;product=lysine exporter LysO family protein;protein_id=WP_046372039.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4010756 4011566 . - . ID=gene-LU631_RS21060;Name=LU631_RS21060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21060;old_locus_tag=LU631_21060;pseudo=true NZ_CP089940.1 Protein Homology CDS 4010756 4011566 . - 0 ID=cds-LU631_RS21060;Parent=gene-LU631_RS21060;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS21060;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4012416 4012985 . - . ID=gene-LU631_RS21065;Name=LU631_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21065;old_locus_tag=LU631_21065 NZ_CP089940.1 Protein Homology CDS 4012416 4012985 . - 0 ID=cds-WP_233481940.1;Parent=gene-LU631_RS21065;Dbxref=Genbank:WP_233481940.1;Name=WP_233481940.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS21065;product=transposase;protein_id=WP_233481940.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4012972 4013640 . - . ID=gene-LU631_RS21070;Name=LU631_RS21070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21070;old_locus_tag=LU631_21070;partial=true;pseudo=true;start_range=.,4012972 NZ_CP089940.1 Protein Homology CDS 4012972 4013640 . - 0 ID=cds-LU631_RS21070;Parent=gene-LU631_RS21070;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS21070;partial=true;product=transposase zinc-binding domain-containing protein;pseudo=true;start_range=.,4012972;transl_table=11 NZ_CP089940.1 RefSeq gene 4013639 4013767 . + . ID=gene-LU631_RS26220;Name=LU631_RS26220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26220 NZ_CP089940.1 GeneMarkS-2+ CDS 4013639 4013767 . + 0 ID=cds-WP_267921502.1;Parent=gene-LU631_RS26220;Dbxref=Genbank:WP_267921502.1;Name=WP_267921502.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS26220;product=hypothetical protein;protein_id=WP_267921502.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4013908 4014720 . - . ID=gene-LU631_RS21075;Name=LU631_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21075;old_locus_tag=LU631_21075 NZ_CP089940.1 Protein Homology CDS 4013908 4014720 . - 0 ID=cds-WP_016192032.1;Parent=gene-LU631_RS21075;Dbxref=Genbank:WP_016192032.1;Name=WP_016192032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814405.1;locus_tag=LU631_RS21075;product=IclR family transcriptional regulator;protein_id=WP_016192032.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4015045 4016571 . + . ID=gene-LU631_RS21080;Name=LU631_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21080;old_locus_tag=LU631_21080 NZ_CP089940.1 Protein Homology CDS 4015045 4016571 . + 0 ID=cds-WP_016192033.1;Parent=gene-LU631_RS21080;Dbxref=Genbank:WP_016192033.1;Name=WP_016192033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024269.1;locus_tag=LU631_RS21080;product=sugar ABC transporter ATP-binding protein;protein_id=WP_016192033.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4016612 4017712 . + . ID=gene-LU631_RS21085;Name=LU631_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21085;old_locus_tag=LU631_21085 NZ_CP089940.1 Protein Homology CDS 4016612 4017712 . + 0 ID=cds-WP_016192034.1;Parent=gene-LU631_RS21085;Dbxref=Genbank:WP_016192034.1;Name=WP_016192034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024268.1;locus_tag=LU631_RS21085;product=ABC transporter permease;protein_id=WP_016192034.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4017709 4018809 . + . ID=gene-LU631_RS21090;Name=LU631_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21090;old_locus_tag=LU631_21090 NZ_CP089940.1 Protein Homology CDS 4017709 4018809 . + 0 ID=cds-WP_016192035.1;Parent=gene-LU631_RS21090;Dbxref=Genbank:WP_016192035.1;Name=WP_016192035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015841819.1;locus_tag=LU631_RS21090;product=substrate-binding domain-containing protein;protein_id=WP_016192035.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4018820 4019671 . + . ID=gene-LU631_RS21095;Name=LU631_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21095;old_locus_tag=LU631_21095 NZ_CP089940.1 Protein Homology CDS 4018820 4019671 . + 0 ID=cds-WP_016192036.1;Parent=gene-LU631_RS21095;Dbxref=Genbank:WP_016192036.1;Name=WP_016192036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121624.1;locus_tag=LU631_RS21095;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_016192036.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4019988 4020986 . + . ID=gene-LU631_RS21100;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=LU631_RS21100;old_locus_tag=LU631_21100 NZ_CP089940.1 Protein Homology CDS 4019988 4020986 . + 0 ID=cds-WP_016192037.1;Parent=gene-LU631_RS21100;Dbxref=Genbank:WP_016192037.1;Name=WP_016192037.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006327774.1;locus_tag=LU631_RS21100;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_016192037.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4021000 4021458 . + . ID=gene-LU631_RS21105;Name=LU631_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21105;old_locus_tag=LU631_21105 NZ_CP089940.1 Protein Homology CDS 4021000 4021458 . + 0 ID=cds-WP_016192038.1;Parent=gene-LU631_RS21105;Dbxref=Genbank:WP_016192038.1;Name=WP_016192038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893886.1;locus_tag=LU631_RS21105;product=YhcH/YjgK/YiaL family protein;protein_id=WP_016192038.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4021473 4022771 . + . ID=gene-LU631_RS21110;Name=LU631_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21110;old_locus_tag=LU631_21110 NZ_CP089940.1 Protein Homology CDS 4021473 4022771 . + 0 ID=cds-WP_046372041.1;Parent=gene-LU631_RS21110;Dbxref=Genbank:WP_046372041.1;Name=WP_046372041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146637.1;locus_tag=LU631_RS21110;product=MFS transporter;protein_id=WP_046372041.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4022768 4024252 . + . ID=gene-LU631_RS21115;Name=LU631_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21115;old_locus_tag=LU631_21115 NZ_CP089940.1 Protein Homology CDS 4022768 4024252 . + 0 ID=cds-WP_016192041.1;Parent=gene-LU631_RS21115;Dbxref=Genbank:WP_016192041.1;Name=WP_016192041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509052.1;locus_tag=LU631_RS21115;product=carbohydrate kinase;protein_id=WP_016192041.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4024249 4024911 . + . ID=gene-LU631_RS21120;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=LU631_RS21120;old_locus_tag=LU631_21120 NZ_CP089940.1 Protein Homology CDS 4024249 4024911 . + 0 ID=cds-WP_016192042.1;Parent=gene-LU631_RS21120;Dbxref=Genbank:WP_016192042.1;Name=WP_016192042.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952553.1;locus_tag=LU631_RS21120;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_016192042.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4024914 4025771 . + . ID=gene-LU631_RS21125;Name=LU631_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21125;old_locus_tag=LU631_21125 NZ_CP089940.1 Protein Homology CDS 4024914 4025771 . + 0 ID=cds-WP_016192043.1;Parent=gene-LU631_RS21125;Dbxref=Genbank:WP_016192043.1;Name=WP_016192043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949502.1;locus_tag=LU631_RS21125;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_016192043.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4025768 4026466 . + . ID=gene-LU631_RS21130;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=LU631_RS21130;old_locus_tag=LU631_21130 NZ_CP089940.1 Protein Homology CDS 4025768 4026466 . + 0 ID=cds-WP_016192044.1;Parent=gene-LU631_RS21130;Dbxref=Genbank:WP_016192044.1;Name=WP_016192044.1;Ontology_term=GO:0019568,GO:0008742;gbkey=CDS;gene=araD;go_function=L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105629.1;locus_tag=LU631_RS21130;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_016192044.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4026556 4027375 . - . ID=gene-LU631_RS21135;Name=LU631_RS21135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21135;old_locus_tag=LU631_21135;pseudo=true NZ_CP089940.1 Protein Homology CDS 4026556 4027375 . - 0 ID=cds-LU631_RS21135;Parent=gene-LU631_RS21135;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS21135;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4027958 4028797 . + . ID=gene-LU631_RS21140;Name=LU631_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21140;old_locus_tag=LU631_21140 NZ_CP089940.1 Protein Homology CDS 4027958 4028797 . + 0 ID=cds-WP_016192047.1;Parent=gene-LU631_RS21140;Dbxref=Genbank:WP_016192047.1;Name=WP_016192047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011988487.1;locus_tag=LU631_RS21140;product=hypothetical protein;protein_id=WP_016192047.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4028985 4029122 . - . ID=gene-LU631_RS21145;Name=LU631_RS21145;end_range=4029122,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21145;old_locus_tag=LU631_21145;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4028985 4029122 . - 0 ID=cds-LU631_RS21145;Parent=gene-LU631_RS21145;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4029122,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU631_RS21145;partial=true;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4029167 4029412 . - . ID=gene-LU631_RS21150;Name=LU631_RS21150;end_range=4029412,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21150;old_locus_tag=LU631_21150;partial=true;pseudo=true;start_range=.,4029167 NZ_CP089940.1 Protein Homology CDS 4029167 4029412 . - 0 ID=cds-LU631_RS21150;Parent=gene-LU631_RS21150;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4029412,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611456.1;locus_tag=LU631_RS21150;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,4029167;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4029404 4029805 . + . ID=gene-LU631_RS21155;Name=LU631_RS21155;end_range=4029805,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21155;old_locus_tag=LU631_21155;partial=true;pseudo=true;start_range=.,4029404 NZ_CP089940.1 Protein Homology CDS 4029404 4029805 . + 0 ID=cds-LU631_RS21155;Parent=gene-LU631_RS21155;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4029805,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542083.1;locus_tag=LU631_RS21155;partial=true;product=DNA primase;pseudo=true;start_range=.,4029404;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4030666 4031865 . - . ID=gene-LU631_RS21160;Name=LU631_RS21160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21160;old_locus_tag=LU631_21160;pseudo=true NZ_CP089940.1 Protein Homology CDS 4030666 4031865 . - 0 ID=cds-LU631_RS21160;Parent=gene-LU631_RS21160;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611429.1;locus_tag=LU631_RS21160;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4031967 4033202 . - . ID=gene-LU631_RS21165;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=pseudogene;locus_tag=LU631_RS21165;old_locus_tag=LU631_21165;pseudo=true NZ_CP089940.1 Protein Homology CDS 4031967 4033202 . - 0 ID=cds-LU631_RS21165;Parent=gene-LU631_RS21165;Note=frameshifted%3B internal stop;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170430.1;locus_tag=LU631_RS21165;product=alanine transaminase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4034032 4034997 . - . ID=gene-LU631_RS21170;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=LU631_RS21170;old_locus_tag=LU631_21170 NZ_CP089940.1 Protein Homology CDS 4034032 4034997 . - 0 ID=cds-WP_016192053.1;Parent=gene-LU631_RS21170;Dbxref=Genbank:WP_016192053.1;Name=WP_016192053.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594240.1;locus_tag=LU631_RS21170;product=glucokinase;protein_id=WP_016192053.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4035541 4036011 . - . ID=gene-LU631_RS21175;Name=LU631_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21175;old_locus_tag=LU631_21175 NZ_CP089940.1 Protein Homology CDS 4035541 4036011 . - 0 ID=cds-WP_016192054.1;Parent=gene-LU631_RS21175;Dbxref=Genbank:WP_016192054.1;Name=WP_016192054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171915.1;locus_tag=LU631_RS21175;product=VirK family protein;protein_id=WP_016192054.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4036128 4036631 . - . ID=gene-LU631_RS21180;Name=LU631_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21180;old_locus_tag=LU631_21180 NZ_CP089940.1 Protein Homology CDS 4036128 4036631 . - 0 ID=cds-WP_046372043.1;Parent=gene-LU631_RS21180;Dbxref=Genbank:WP_046372043.1;Name=WP_046372043.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU631_RS21180;product=IS1 family transposase;protein_id=WP_046372043.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4036550 4036825 . - . ID=gene-LU631_RS21185;Name=LU631_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21185;old_locus_tag=LU631_21185 NZ_CP089940.1 Protein Homology CDS 4036550 4036825 . - 0 ID=cds-WP_072052792.1-3;Parent=gene-LU631_RS21185;Dbxref=Genbank:WP_072052792.1;Name=WP_072052792.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU631_RS21185;product=IS1-like element transposase;protein_id=WP_072052792.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4037310 4038484 . - . ID=gene-LU631_RS21190;Name=LU631_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21190;old_locus_tag=LU631_21190 NZ_CP089940.1 Protein Homology CDS 4038229 4038484 . - 0 ID=cds-WP_152664199.1;Parent=gene-LU631_RS21190;Dbxref=Genbank:WP_152664199.1;Name=WP_152664199.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612096.1;locus_tag=LU631_RS21190;product=IS3 family transposase;protein_id=WP_152664199.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 4037310 4038229 . - 2 ID=cds-WP_152664199.1;Parent=gene-LU631_RS21190;Dbxref=Genbank:WP_152664199.1;Name=WP_152664199.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612096.1;locus_tag=LU631_RS21190;product=IS3 family transposase;protein_id=WP_152664199.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4039051 4040264 . + . ID=gene-LU631_RS21195;Name=LU631_RS21195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21195;old_locus_tag=LU631_21195;partial=true;pseudo=true;start_range=.,4039051 NZ_CP089940.1 Protein Homology CDS 4039051 4040264 . + 0 ID=cds-LU631_RS21195;Parent=gene-LU631_RS21195;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008150,GO:0005524,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=ATP binding|0005524||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012822421.1;locus_tag=LU631_RS21195;partial=true;product=conjugative transfer ATPase;pseudo=true;start_range=.,4039051;transl_table=11 NZ_CP089940.1 RefSeq gene 4040261 4040665 . + . ID=gene-LU631_RS21200;Name=LU631_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21200;old_locus_tag=LU631_21200 NZ_CP089940.1 Protein Homology CDS 4040261 4040665 . + 0 ID=cds-WP_016192058.1-2;Parent=gene-LU631_RS21200;Dbxref=Genbank:WP_016192058.1;Name=WP_016192058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192058.1;locus_tag=LU631_RS21200;product=hypothetical protein;protein_id=WP_016192058.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4040914 4041822 . + . ID=gene-LU631_RS21205;Name=LU631_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21205;old_locus_tag=LU631_21205 NZ_CP089940.1 Protein Homology CDS 4040914 4041822 . + 0 ID=cds-WP_046372045.1;Parent=gene-LU631_RS21205;Dbxref=Genbank:WP_046372045.1;Name=WP_046372045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_035718769.1;locus_tag=LU631_RS21205;product=IS481 family transposase;protein_id=WP_046372045.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4041881 4042222 . - . ID=gene-LU631_RS21210;Name=LU631_RS21210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21210;old_locus_tag=LU631_21210;partial=true;pseudo=true;start_range=.,4041881 NZ_CP089940.1 Protein Homology CDS 4041881 4042222 . - 0 ID=cds-LU631_RS21210;Parent=gene-LU631_RS21210;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004173060.1;locus_tag=LU631_RS21210;partial=true;product=universal stress protein;pseudo=true;start_range=.,4041881;transl_table=11 NZ_CP089940.1 RefSeq gene 4042229 4043011 . - . ID=gene-LU631_RS21215;Name=LU631_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21215;old_locus_tag=LU631_21215 NZ_CP089940.1 Protein Homology CDS 4042229 4043011 . - 0 ID=cds-WP_016192063.1;Parent=gene-LU631_RS21215;Dbxref=Genbank:WP_016192063.1;Name=WP_016192063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005768.1;locus_tag=LU631_RS21215;product=IclR family transcriptional regulator;protein_id=WP_016192063.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4043173 4044765 . + . ID=gene-LU631_RS21220;Name=LU631_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21220;old_locus_tag=LU631_21220 NZ_CP089940.1 Protein Homology CDS 4043173 4044765 . + 0 ID=cds-WP_016192064.1;Parent=gene-LU631_RS21220;Dbxref=Genbank:WP_016192064.1;Name=WP_016192064.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120360.1;locus_tag=LU631_RS21220;product=MFS transporter;protein_id=WP_016192064.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4044768 4045796 . + . ID=gene-LU631_RS21225;Name=LU631_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21225;old_locus_tag=LU631_21225 NZ_CP089940.1 Protein Homology CDS 4044768 4045796 . + 0 ID=cds-WP_016192065.1;Parent=gene-LU631_RS21225;Dbxref=Genbank:WP_016192065.1;Name=WP_016192065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010257869.1;locus_tag=LU631_RS21225;product=HlyD family secretion protein;protein_id=WP_016192065.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4046053 4047078 . - . ID=gene-LU631_RS21230;Name=LU631_RS21230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21230;old_locus_tag=LU631_21230;pseudo=true NZ_CP089940.1 Protein Homology CDS 4046053 4047078 . - 0 ID=cds-LU631_RS21230;Parent=gene-LU631_RS21230;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS21230;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4047495 4048492 . - . ID=gene-LU631_RS21235;Name=LU631_RS21235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21235;old_locus_tag=LU631_21235;pseudo=true NZ_CP089940.1 Protein Homology CDS 4047495 4048492 . - 0 ID=cds-LU631_RS21235;Parent=gene-LU631_RS21235;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492245.1;locus_tag=LU631_RS21235;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4049054 4050174 . + . ID=gene-LU631_RS21240;Name=LU631_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21240;old_locus_tag=LU631_21240 NZ_CP089940.1 Protein Homology CDS 4049054 4049312 . + 0 ID=cds-WP_152664200.1;Parent=gene-LU631_RS21240;Dbxref=Genbank:WP_152664200.1;Name=WP_152664200.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS21240;product=IS3 family transposase;protein_id=WP_152664200.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 4049312 4050174 . + 2 ID=cds-WP_152664200.1;Parent=gene-LU631_RS21240;Dbxref=Genbank:WP_152664200.1;Name=WP_152664200.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS21240;product=IS3 family transposase;protein_id=WP_152664200.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4050266 4050769 . - . ID=gene-LU631_RS21245;Name=LU631_RS21245;end_range=4050769,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21245;old_locus_tag=LU631_21245;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4050266 4050769 . - 0 ID=cds-LU631_RS21245;Parent=gene-LU631_RS21245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4050769,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228314.1;locus_tag=LU631_RS21245;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4050871 4051911 . + . ID=gene-LU631_RS21250;Name=LU631_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21250;old_locus_tag=LU631_21250 NZ_CP089940.1 Protein Homology CDS 4050871 4051911 . + 0 ID=cds-WP_046371813.1-15;Parent=gene-LU631_RS21250;Dbxref=Genbank:WP_046371813.1;Name=WP_046371813.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS21250;product=IS481 family transposase;protein_id=WP_046371813.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4051946 4052605 . - . ID=gene-LU631_RS21255;Name=LU631_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21255;old_locus_tag=LU631_21255 NZ_CP089940.1 GeneMarkS-2+ CDS 4051946 4052605 . - 0 ID=cds-WP_082103774.1;Parent=gene-LU631_RS21255;Dbxref=Genbank:WP_082103774.1;Name=WP_082103774.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS21255;product=hypothetical protein;protein_id=WP_082103774.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4052733 4053430 . + . ID=gene-LU631_RS21260;Name=LU631_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21260;old_locus_tag=LU631_21260 NZ_CP089940.1 Protein Homology CDS 4052733 4052994 . + 0 ID=cds-WP_233481941.1;Parent=gene-LU631_RS21260;Dbxref=Genbank:WP_233481941.1;Name=WP_233481941.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS21260;product=IS1 family transposase;protein_id=WP_233481941.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 4052994 4053430 . + 2 ID=cds-WP_233481941.1;Parent=gene-LU631_RS21260;Dbxref=Genbank:WP_233481941.1;Name=WP_233481941.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS21260;product=IS1 family transposase;protein_id=WP_233481941.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4053468 4054237 . + . ID=gene-LU631_RS21265;Name=LU631_RS21265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21265;old_locus_tag=LU631_21265;partial=true;pseudo=true;start_range=.,4053468 NZ_CP089940.1 Protein Homology CDS 4053468 4054237 . + 0 ID=cds-LU631_RS21265;Parent=gene-LU631_RS21265;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=LU631_RS21265;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,4053468;transl_table=11 NZ_CP089940.1 RefSeq gene 4054459 4054809 . + . ID=gene-LU631_RS21270;Name=LU631_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21270;old_locus_tag=LU631_21270 NZ_CP089940.1 Protein Homology CDS 4054459 4054809 . + 0 ID=cds-WP_016192069.1;Parent=gene-LU631_RS21270;Dbxref=Genbank:WP_016192069.1;Name=WP_016192069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016537647.1;locus_tag=LU631_RS21270;product=hypothetical protein;protein_id=WP_016192069.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4054962 4056002 . - . ID=gene-LU631_RS21275;Name=LU631_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21275;old_locus_tag=LU631_21275 NZ_CP089940.1 Protein Homology CDS 4054962 4056002 . - 0 ID=cds-WP_046372049.1;Parent=gene-LU631_RS21275;Dbxref=Genbank:WP_046372049.1;Name=WP_046372049.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS21275;product=IS481 family transposase;protein_id=WP_046372049.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4056081 4057277 . - . ID=gene-LU631_RS21280;Name=LU631_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21280;old_locus_tag=LU631_21280 NZ_CP089940.1 Protein Homology CDS 4056081 4057277 . - 0 ID=cds-WP_046372050.1;Parent=gene-LU631_RS21280;Dbxref=Genbank:WP_046372050.1;Name=WP_046372050.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS21280;product=IS256 family transposase;protein_id=WP_046372050.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4057467 4058789 . - . ID=gene-LU631_RS21285;Name=LU631_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21285;old_locus_tag=LU631_21285 NZ_CP089940.1 Protein Homology CDS 4057467 4058789 . - 0 ID=cds-WP_233481942.1;Parent=gene-LU631_RS21285;Dbxref=Genbank:WP_233481942.1;Name=WP_233481942.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS21285;product=IS4 family transposase;protein_id=WP_233481942.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4058964 4060004 . + . ID=gene-LU631_RS21290;Name=LU631_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21290;old_locus_tag=LU631_21290 NZ_CP089940.1 Protein Homology CDS 4058964 4060004 . + 0 ID=cds-WP_046371818.1-5;Parent=gene-LU631_RS21290;Dbxref=Genbank:WP_046371818.1;Name=WP_046371818.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS21290;product=IS481 family transposase;protein_id=WP_046371818.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4060039 4060491 . - . ID=gene-LU631_RS21295;Name=LU631_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21295;old_locus_tag=LU631_21295 NZ_CP089940.1 Protein Homology CDS 4060039 4060491 . - 0 ID=cds-WP_233481943.1;Parent=gene-LU631_RS21295;Dbxref=Genbank:WP_233481943.1;Name=WP_233481943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814744.1;locus_tag=LU631_RS21295;product=hypothetical protein;protein_id=WP_233481943.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4060481 4060849 . - . ID=gene-LU631_RS21300;Name=LU631_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21300;old_locus_tag=LU631_21300 NZ_CP089940.1 Protein Homology CDS 4060481 4060849 . - 0 ID=cds-WP_016192071.1;Parent=gene-LU631_RS21300;Dbxref=Genbank:WP_016192071.1;Name=WP_016192071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544083.1;locus_tag=LU631_RS21300;product=phage-like protein;protein_id=WP_016192071.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4060972 4061427 . + . ID=gene-LU631_RS21305;Name=LU631_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21305;old_locus_tag=LU631_21305 NZ_CP089940.1 Protein Homology CDS 4060972 4061427 . + 0 ID=cds-WP_014544082.1;Parent=gene-LU631_RS21305;Dbxref=Genbank:WP_014544082.1;Name=WP_014544082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544082.1;locus_tag=LU631_RS21305;product=hypothetical protein;protein_id=WP_014544082.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4061449 4061997 . - . ID=gene-LU631_RS21310;Name=LU631_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21310;old_locus_tag=LU631_21310 NZ_CP089940.1 Protein Homology CDS 4061449 4061997 . - 0 ID=cds-WP_016192072.1;Parent=gene-LU631_RS21310;Dbxref=Genbank:WP_016192072.1;Name=WP_016192072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544081.1;locus_tag=LU631_RS21310;product=hypothetical protein;protein_id=WP_016192072.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4061994 4062434 . - . ID=gene-LU631_RS21315;Name=LU631_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21315;old_locus_tag=LU631_21315 NZ_CP089940.1 Protein Homology CDS 4061994 4062434 . - 0 ID=cds-WP_016192073.1;Parent=gene-LU631_RS21315;Dbxref=Genbank:WP_016192073.1;Name=WP_016192073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014538898.1;locus_tag=LU631_RS21315;product=DUF4054 domain-containing protein;protein_id=WP_016192073.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4062431 4062775 . - . ID=gene-LU631_RS21320;Name=LU631_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21320;old_locus_tag=LU631_21320 NZ_CP089940.1 Protein Homology CDS 4062431 4062775 . - 0 ID=cds-WP_016192074.1;Parent=gene-LU631_RS21320;Dbxref=Genbank:WP_016192074.1;Name=WP_016192074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192074.1;locus_tag=LU631_RS21320;product=hypothetical protein;protein_id=WP_016192074.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4062818 4063885 . - . ID=gene-LU631_RS21325;Name=LU631_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21325;old_locus_tag=LU631_21325 NZ_CP089940.1 Protein Homology CDS 4062818 4063885 . - 0 ID=cds-WP_016192075.1;Parent=gene-LU631_RS21325;Dbxref=Genbank:WP_016192075.1;Name=WP_016192075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533513.1;locus_tag=LU631_RS21325;product=DUF2184 domain-containing protein;protein_id=WP_016192075.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4063887 4064384 . - . ID=gene-LU631_RS21330;Name=LU631_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21330;old_locus_tag=LU631_21330 NZ_CP089940.1 Protein Homology CDS 4063887 4064384 . - 0 ID=cds-WP_016192076.1;Parent=gene-LU631_RS21330;Dbxref=Genbank:WP_016192076.1;Name=WP_016192076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544077.1;locus_tag=LU631_RS21330;product=hypothetical protein;protein_id=WP_016192076.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4064384 4065673 . - . ID=gene-LU631_RS21335;Name=LU631_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21335;old_locus_tag=LU631_21335 NZ_CP089940.1 Protein Homology CDS 4064384 4065673 . - 0 ID=cds-WP_016192077.1;Parent=gene-LU631_RS21335;Dbxref=Genbank:WP_016192077.1;Name=WP_016192077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544076.1;locus_tag=LU631_RS21335;product=DUF2213 domain-containing protein;protein_id=WP_016192077.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4065670 4066383 . - . ID=gene-LU631_RS21340;Name=LU631_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21340;old_locus_tag=LU631_21340 NZ_CP089940.1 Protein Homology CDS 4065670 4066383 . - 0 ID=cds-WP_016192078.1;Parent=gene-LU631_RS21340;Dbxref=Genbank:WP_016192078.1;Name=WP_016192078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192078.1;locus_tag=LU631_RS21340;product=phage minor head protein;protein_id=WP_016192078.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4066373 4067899 . - . ID=gene-LU631_RS21345;Name=LU631_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21345;old_locus_tag=LU631_21345 NZ_CP089940.1 Protein Homology CDS 4066373 4067899 . - 0 ID=cds-WP_016192079.1;Parent=gene-LU631_RS21345;Dbxref=Genbank:WP_016192079.1;Name=WP_016192079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192079.1;locus_tag=LU631_RS21345;product=DUF1073 domain-containing protein;protein_id=WP_016192079.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4067902 4069320 . - . ID=gene-LU631_RS21350;Name=terL;gbkey=Gene;gene=terL;gene_biotype=protein_coding;locus_tag=LU631_RS21350;old_locus_tag=LU631_21350 NZ_CP089940.1 Protein Homology CDS 4067902 4069320 . - 0 ID=cds-WP_016192080.1;Parent=gene-LU631_RS21350;Dbxref=Genbank:WP_016192080.1;Name=WP_016192080.1;gbkey=CDS;gene=terL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019076911.1;locus_tag=LU631_RS21350;product=phage terminase large subunit;protein_id=WP_016192080.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4069286 4069858 . - . ID=gene-LU631_RS21355;Name=LU631_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21355;old_locus_tag=LU631_21355 NZ_CP089940.1 Protein Homology CDS 4069286 4069858 . - 0 ID=cds-WP_016192081.1;Parent=gene-LU631_RS21355;Dbxref=Genbank:WP_016192081.1;Name=WP_016192081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001614330.1;locus_tag=LU631_RS21355;product=terminase small subunit;protein_id=WP_016192081.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4069894 4070367 . - . ID=gene-LU631_RS21360;Name=LU631_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21360;old_locus_tag=LU631_21360 NZ_CP089940.1 Protein Homology CDS 4069894 4070367 . - 0 ID=cds-WP_016192082.1;Parent=gene-LU631_RS21360;Dbxref=Genbank:WP_016192082.1;Name=WP_016192082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549452.1;locus_tag=LU631_RS21360;product=hypothetical protein;protein_id=WP_016192082.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4070425 4070886 . - . ID=gene-LU631_RS21365;Name=LU631_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21365;old_locus_tag=LU631_21365 NZ_CP089940.1 Protein Homology CDS 4070425 4070886 . - 0 ID=cds-WP_016192083.1;Parent=gene-LU631_RS21365;Dbxref=Genbank:WP_016192083.1;Name=WP_016192083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622262.1;locus_tag=LU631_RS21365;product=lysis protein;protein_id=WP_016192083.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4070883 4071299 . - . ID=gene-LU631_RS21370;Name=LU631_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21370;old_locus_tag=LU631_21370 NZ_CP089940.1 Protein Homology CDS 4070883 4071299 . - 0 ID=cds-WP_016192084.1;Parent=gene-LU631_RS21370;Dbxref=Genbank:WP_016192084.1;Name=WP_016192084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539031.1;locus_tag=LU631_RS21370;product=protein P5;protein_id=WP_016192084.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4071296 4071616 . - . ID=gene-LU631_RS21375;Name=LU631_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21375;old_locus_tag=LU631_21375 NZ_CP089940.1 Protein Homology CDS 4071296 4071616 . - 0 ID=cds-WP_016192085.1;Parent=gene-LU631_RS21375;Dbxref=Genbank:WP_016192085.1;Name=WP_016192085.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000783764.1;locus_tag=LU631_RS21375;product=phage holin%2C lambda family;protein_id=WP_016192085.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4071701 4071997 . - . ID=gene-LU631_RS21380;Name=LU631_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21380;old_locus_tag=LU631_21380 NZ_CP089940.1 GeneMarkS-2+ CDS 4071701 4071997 . - 0 ID=cds-WP_016192086.1;Parent=gene-LU631_RS21380;Dbxref=Genbank:WP_016192086.1;Name=WP_016192086.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS21380;product=hypothetical protein;protein_id=WP_016192086.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4071998 4072558 . - . ID=gene-LU631_RS21385;Name=LU631_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21385;old_locus_tag=LU631_21385 NZ_CP089940.1 Protein Homology CDS 4071998 4072558 . - 0 ID=cds-WP_016192087.1;Parent=gene-LU631_RS21385;Dbxref=Genbank:WP_016192087.1;Name=WP_016192087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079700.1;locus_tag=LU631_RS21385;product=hypothetical protein;protein_id=WP_016192087.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4072987 4073355 . - . ID=gene-LU631_RS21390;Name=LU631_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21390;old_locus_tag=LU631_21390 NZ_CP089940.1 Protein Homology CDS 4072987 4073355 . - 0 ID=cds-WP_232426904.1;Parent=gene-LU631_RS21390;Dbxref=Genbank:WP_232426904.1;Name=WP_232426904.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: protein motif:HMM:NF018262.2;locus_tag=LU631_RS21390;product=antiterminator Q family protein;protein_id=WP_232426904.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4073473 4073682 . - . ID=gene-LU631_RS21395;Name=LU631_RS21395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21395;old_locus_tag=LU631_21395;partial=true;pseudo=true;start_range=.,4073473 NZ_CP089940.1 Protein Homology CDS 4073473 4073682 . - 0 ID=cds-LU631_RS21395;Parent=gene-LU631_RS21395;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653823.1;locus_tag=LU631_RS21395;partial=true;product=DNA N-6-adenine-methyltransferase;pseudo=true;start_range=.,4073473;transl_table=11 NZ_CP089940.1 RefSeq gene 4073679 4074272 . - . ID=gene-LU631_RS21400;Name=LU631_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21400;old_locus_tag=LU631_21400 NZ_CP089940.1 Protein Homology CDS 4073679 4074272 . - 0 ID=cds-WP_046372051.1;Parent=gene-LU631_RS21400;Dbxref=Genbank:WP_046372051.1;Name=WP_046372051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006119778.1;locus_tag=LU631_RS21400;product=DUF1367 family protein;protein_id=WP_046372051.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4074330 4074527 . - . ID=gene-LU631_RS21405;Name=LU631_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21405;old_locus_tag=LU631_21405 NZ_CP089940.1 Protein Homology CDS 4074330 4074527 . - 0 ID=cds-WP_016192912.1-2;Parent=gene-LU631_RS21405;Dbxref=Genbank:WP_016192912.1;Name=WP_016192912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668060.1;locus_tag=LU631_RS21405;product=hypothetical protein;protein_id=WP_016192912.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4074745 4075452 . + . ID=gene-LU631_RS21410;Name=LU631_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21410;old_locus_tag=LU631_21410 NZ_CP089940.1 Protein Homology CDS 4074745 4075452 . + 0 ID=cds-WP_046372024.1-2;Parent=gene-LU631_RS21410;Dbxref=Genbank:WP_046372024.1;Name=WP_046372024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308877.1;locus_tag=LU631_RS21410;product=M91 family zinc metallopeptidase;protein_id=WP_046372024.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4075486 4076706 . + . ID=gene-LU631_RS21415;Name=LU631_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21415;old_locus_tag=LU631_21415 NZ_CP089940.1 Protein Homology CDS 4075486 4076706 . + 0 ID=cds-WP_046371929.1-6;Parent=gene-LU631_RS21415;Dbxref=Genbank:WP_046371929.1;Name=WP_046371929.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343765.1;locus_tag=LU631_RS21415;product=ISL3 family transposase;protein_id=WP_046371929.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4076947 4077105 . - . ID=gene-LU631_RS21420;Name=LU631_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21420;old_locus_tag=LU631_21420 NZ_CP089940.1 Protein Homology CDS 4076947 4077105 . - 0 ID=cds-WP_072052826.1;Parent=gene-LU631_RS21420;Dbxref=Genbank:WP_072052826.1;Name=WP_072052826.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544058.1;locus_tag=LU631_RS21420;product=type I toxin-antitoxin system Hok family toxin;protein_id=WP_072052826.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4077144 4078184 . - . ID=gene-LU631_RS21425;Name=LU631_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21425;old_locus_tag=LU631_21425 NZ_CP089940.1 Protein Homology CDS 4077144 4078184 . - 0 ID=cds-WP_046371791.1-21;Parent=gene-LU631_RS21425;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS21425;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4078512 4079336 . - . ID=gene-LU631_RS21430;Name=LU631_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21430;old_locus_tag=LU631_21430 NZ_CP089940.1 Protein Homology CDS 4078512 4079336 . - 0 ID=cds-WP_016192090.1;Parent=gene-LU631_RS21430;Dbxref=Genbank:WP_016192090.1;Name=WP_016192090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192915.1;locus_tag=LU631_RS21430;product=hypothetical protein;protein_id=WP_016192090.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4079356 4080096 . - . ID=gene-LU631_RS21435;Name=LU631_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21435;old_locus_tag=LU631_21435 NZ_CP089940.1 Protein Homology CDS 4079356 4080096 . - 0 ID=cds-WP_016192091.1;Parent=gene-LU631_RS21435;Dbxref=Genbank:WP_016192091.1;Name=WP_016192091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800014.1;locus_tag=LU631_RS21435;product=ATP-binding protein;protein_id=WP_016192091.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4080099 4080953 . - . ID=gene-LU631_RS21440;Name=LU631_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21440;old_locus_tag=LU631_21440 NZ_CP089940.1 Protein Homology CDS 4080099 4080953 . - 0 ID=cds-WP_016192092.1;Parent=gene-LU631_RS21440;Dbxref=Genbank:WP_016192092.1;Name=WP_016192092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001419880.1;locus_tag=LU631_RS21440;product=hypothetical protein;protein_id=WP_016192092.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4080995 4081468 . - . ID=gene-LU631_RS21445;Name=LU631_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21445;old_locus_tag=LU631_21445 NZ_CP089940.1 Protein Homology CDS 4080995 4081468 . - 0 ID=cds-WP_016192093.1;Parent=gene-LU631_RS21445;Dbxref=Genbank:WP_016192093.1;Name=WP_016192093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668055.1;locus_tag=LU631_RS21445;product=toxin YdaT family protein;protein_id=WP_016192093.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4081446 4081676 . - . ID=gene-LU631_RS21450;Name=LU631_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21450;old_locus_tag=LU631_21450 NZ_CP089940.1 Protein Homology CDS 4081446 4081676 . - 0 ID=cds-WP_016192094.1;Parent=gene-LU631_RS21450;Dbxref=Genbank:WP_016192094.1;Name=WP_016192094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728351.1;locus_tag=LU631_RS21450;product=Cro/CI family transcriptional regulator;protein_id=WP_016192094.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4081756 4082160 . + . ID=gene-LU631_RS21455;Name=LU631_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21455;old_locus_tag=LU631_21455 NZ_CP089940.1 Protein Homology CDS 4081756 4082160 . + 0 ID=cds-WP_016192095.1;Parent=gene-LU631_RS21455;Dbxref=Genbank:WP_016192095.1;Name=WP_016192095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706801.1;locus_tag=LU631_RS21455;product=helix-turn-helix domain-containing protein;protein_id=WP_016192095.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4082402 4082617 . + . ID=gene-LU631_RS21460;Name=LU631_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21460;old_locus_tag=LU631_21460 NZ_CP089940.1 Protein Homology CDS 4082402 4082617 . + 0 ID=cds-WP_016192096.1-2;Parent=gene-LU631_RS21460;Dbxref=Genbank:WP_016192096.1;Name=WP_016192096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005966.1;locus_tag=LU631_RS21460;product=hypothetical protein;protein_id=WP_016192096.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4082999 4083193 . + . ID=gene-LU631_RS21465;Name=LU631_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21465;old_locus_tag=LU631_21465 NZ_CP089940.1 Protein Homology CDS 4082999 4083193 . + 0 ID=cds-WP_016192097.1-2;Parent=gene-LU631_RS21465;Dbxref=Genbank:WP_016192097.1;Name=WP_016192097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544050.1;locus_tag=LU631_RS21465;product=cell division protein FtsZ;protein_id=WP_016192097.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4083264 4083599 . + . ID=gene-LU631_RS21470;Name=LU631_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21470;old_locus_tag=LU631_21470 NZ_CP089940.1 GeneMarkS-2+ CDS 4083264 4083599 . + 0 ID=cds-WP_016192098.1-2;Parent=gene-LU631_RS21470;Dbxref=Genbank:WP_016192098.1;Name=WP_016192098.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS21470;product=hypothetical protein;protein_id=WP_016192098.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4085310 4086107 . + . ID=gene-LU631_RS21475;Name=LU631_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21475;old_locus_tag=LU631_21475 NZ_CP089940.1 Protein Homology CDS 4085310 4086107 . + 0 ID=cds-WP_040465749.1-2;Parent=gene-LU631_RS21475;Dbxref=Genbank:WP_040465749.1;Name=WP_040465749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017346158.1;locus_tag=LU631_RS21475;product=PD-(D/E)XK nuclease-like domain-containing protein;protein_id=WP_040465749.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4086113 4086925 . + . ID=gene-LU631_RS21480;Name=LU631_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21480;old_locus_tag=LU631_21480 NZ_CP089940.1 Protein Homology CDS 4086113 4086925 . + 0 ID=cds-WP_046372052.1;Parent=gene-LU631_RS21480;Dbxref=Genbank:WP_046372052.1;Name=WP_046372052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192100.1;locus_tag=LU631_RS21480;product=hypothetical protein;protein_id=WP_046372052.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4087069 4087476 . + . ID=gene-LU631_RS21485;Name=LU631_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21485;old_locus_tag=LU631_21485 NZ_CP089940.1 GeneMarkS-2+ CDS 4087069 4087476 . + 0 ID=cds-WP_046372001.1-2;Parent=gene-LU631_RS21485;Dbxref=Genbank:WP_046372001.1;Name=WP_046372001.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS21485;product=hypothetical protein;protein_id=WP_046372001.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4087469 4087693 . + . ID=gene-LU631_RS21490;Name=LU631_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21490;old_locus_tag=LU631_21490 NZ_CP089940.1 Protein Homology CDS 4087469 4087693 . + 0 ID=cds-WP_046372000.1-2;Parent=gene-LU631_RS21490;Dbxref=Genbank:WP_046372000.1;Name=WP_046372000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236813.1;locus_tag=LU631_RS21490;product=hypothetical protein;protein_id=WP_046372000.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4087690 4088466 . + . ID=gene-LU631_RS21495;Name=LU631_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21495;old_locus_tag=LU631_21495 NZ_CP089940.1 GeneMarkS-2+ CDS 4087690 4088466 . + 0 ID=cds-WP_052734704.1-2;Parent=gene-LU631_RS21495;Dbxref=Genbank:WP_052734704.1;Name=WP_052734704.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS21495;product=hypothetical protein;protein_id=WP_052734704.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4088593 4089802 . + . ID=gene-LU631_RS21500;Name=LU631_RS21500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21500;old_locus_tag=LU631_21500;pseudo=true NZ_CP089940.1 Protein Homology CDS 4088593 4089802 . + 0 ID=cds-LU631_RS21500;Parent=gene-LU631_RS21500;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS21500;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4089858 4090394 . + . ID=gene-LU631_RS21505;Name=LU631_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21505;old_locus_tag=LU631_21505 NZ_CP089940.1 Protein Homology CDS 4089858 4090394 . + 0 ID=cds-WP_052734707.1;Parent=gene-LU631_RS21505;Dbxref=Genbank:WP_052734707.1;Name=WP_052734707.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025085.2;locus_tag=LU631_RS21505;product=DUF4942 domain-containing protein;protein_id=WP_052734707.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4090445 4091485 . - . ID=gene-LU631_RS21510;Name=LU631_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21510;old_locus_tag=LU631_21510 NZ_CP089940.1 Protein Homology CDS 4090445 4091485 . - 0 ID=cds-WP_046371791.1-22;Parent=gene-LU631_RS21510;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS21510;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4091597 4092634 . + . ID=gene-LU631_RS21515;Name=LU631_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21515;old_locus_tag=LU631_21515 NZ_CP089940.1 Protein Homology CDS 4091597 4092634 . + 0 ID=cds-WP_233481944.1;Parent=gene-LU631_RS21515;Dbxref=Genbank:WP_233481944.1;Name=WP_233481944.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: protein motif:HMM:NF017026.2;locus_tag=LU631_RS21515;product=methyltransferase;protein_id=WP_233481944.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4092701 4092910 . + . ID=gene-LU631_RS21520;Name=LU631_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21520;old_locus_tag=LU631_21520 NZ_CP089940.1 Protein Homology CDS 4092701 4092910 . + 0 ID=cds-WP_071598917.1;Parent=gene-LU631_RS21520;Dbxref=Genbank:WP_071598917.1;Name=WP_071598917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014728427.1;locus_tag=LU631_RS21520;product=hypothetical protein;protein_id=WP_071598917.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4092916 4094094 . + . ID=gene-LU631_RS21525;Name=LU631_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21525;old_locus_tag=LU631_21525 NZ_CP089940.1 Protein Homology CDS 4092916 4094094 . + 0 ID=cds-WP_016191130.1;Parent=gene-LU631_RS21525;Dbxref=Genbank:WP_016191130.1;Name=WP_016191130.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324432.1;locus_tag=LU631_RS21525;product=phage integrase Arm DNA-binding domain-containing protein;protein_id=WP_016191130.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4094446 4094546 . - . ID=gene-LU631_RS21530;Name=LU631_RS21530;end_range=4094546,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21530;old_locus_tag=LU631_21530;partial=true;pseudo=true;start_range=.,4094446 NZ_CP089940.1 Protein Homology CDS 4094446 4094546 . - 0 ID=cds-LU631_RS21530;Parent=gene-LU631_RS21530;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4094546,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309635.1;locus_tag=LU631_RS21530;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4094446;transl_table=11 NZ_CP089940.1 RefSeq gene 4094995 4095273 . + . ID=gene-LU631_RS21535;Name=LU631_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21535;old_locus_tag=LU631_21535 NZ_CP089940.1 Protein Homology CDS 4094995 4095273 . + 0 ID=cds-WP_016191129.1;Parent=gene-LU631_RS21535;Dbxref=Genbank:WP_016191129.1;Name=WP_016191129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039853.1;locus_tag=LU631_RS21535;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_016191129.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4095273 4095581 . + . ID=gene-LU631_RS21540;Name=LU631_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21540;old_locus_tag=LU631_21540 NZ_CP089940.1 Protein Homology CDS 4095273 4095581 . + 0 ID=cds-WP_016191128.1;Parent=gene-LU631_RS21540;Dbxref=Genbank:WP_016191128.1;Name=WP_016191128.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443493.1;locus_tag=LU631_RS21540;product=HigA family addiction module antitoxin;protein_id=WP_016191128.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4095849 4096040 . + . ID=gene-LU631_RS21545;Name=LU631_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21545;old_locus_tag=LU631_21545 NZ_CP089940.1 Protein Homology CDS 4095849 4096040 . + 0 ID=cds-WP_016191127.1;Parent=gene-LU631_RS21545;Dbxref=Genbank:WP_016191127.1;Name=WP_016191127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000183351.1;locus_tag=LU631_RS21545;product=hypothetical protein;protein_id=WP_016191127.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4096037 4096774 . + . ID=gene-LU631_RS21550;Name=LU631_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21550;old_locus_tag=LU631_21550 NZ_CP089940.1 Protein Homology CDS 4096037 4096774 . + 0 ID=cds-WP_016191126.1;Parent=gene-LU631_RS21550;Dbxref=Genbank:WP_016191126.1;Name=WP_016191126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009113078.1;locus_tag=LU631_RS21550;product=phage antirepressor N-terminal domain-containing protein;protein_id=WP_016191126.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4096907 4097257 . + . ID=gene-LU631_RS21555;Name=LU631_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21555;old_locus_tag=LU631_21555 NZ_CP089940.1 Protein Homology CDS 4096907 4097257 . + 0 ID=cds-WP_016191125.1;Parent=gene-LU631_RS21555;Dbxref=Genbank:WP_016191125.1;Name=WP_016191125.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025825.2;locus_tag=LU631_RS21555;product=PH domain-containing protein;protein_id=WP_016191125.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4097297 4097470 . + . ID=gene-LU631_RS21560;Name=LU631_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21560;old_locus_tag=LU631_21560 NZ_CP089940.1 Protein Homology CDS 4097297 4097470 . + 0 ID=cds-WP_232426861.1;Parent=gene-LU631_RS21560;Dbxref=Genbank:WP_232426861.1;Name=WP_232426861.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021378.2;locus_tag=LU631_RS21560;product=SHOCT domain-containing protein;protein_id=WP_232426861.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4097542 4098399 . - . ID=gene-LU631_RS21565;Name=LU631_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21565;old_locus_tag=LU631_21565 NZ_CP089940.1 Protein Homology CDS 4097542 4098399 . - 0 ID=cds-WP_233481945.1;Parent=gene-LU631_RS21565;Dbxref=Genbank:WP_233481945.1;Name=WP_233481945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157638.1;locus_tag=LU631_RS21565;product=phage tail protein;protein_id=WP_233481945.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4098484 4099137 . - . ID=gene-LU631_RS21570;Name=LU631_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21570;old_locus_tag=LU631_21570 NZ_CP089940.1 Protein Homology CDS 4098484 4099137 . - 0 ID=cds-WP_016191123.1;Parent=gene-LU631_RS21570;Dbxref=Genbank:WP_016191123.1;Name=WP_016191123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544095.1;locus_tag=LU631_RS21570;product=DUF2612 domain-containing protein;protein_id=WP_016191123.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4099134 4100321 . - . ID=gene-LU631_RS21575;Name=LU631_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21575;old_locus_tag=LU631_21575 NZ_CP089940.1 Protein Homology CDS 4099134 4100321 . - 0 ID=cds-WP_016191122.1;Parent=gene-LU631_RS21575;Dbxref=Genbank:WP_016191122.1;Name=WP_016191122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544094.1;locus_tag=LU631_RS21575;product=baseplate J/gp47 family protein;protein_id=WP_016191122.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4100314 4100658 . - . ID=gene-LU631_RS21580;Name=LU631_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21580;old_locus_tag=LU631_21580 NZ_CP089940.1 Protein Homology CDS 4100314 4100658 . - 0 ID=cds-WP_016191121.1;Parent=gene-LU631_RS21580;Dbxref=Genbank:WP_016191121.1;Name=WP_016191121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544093.1;locus_tag=LU631_RS21580;product=phage-like protein;protein_id=WP_016191121.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4100740 4101027 . - . ID=gene-LU631_RS21585;Name=LU631_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21585;old_locus_tag=LU631_21585 NZ_CP089940.1 GeneMarkS-2+ CDS 4100740 4101027 . - 0 ID=cds-WP_016191120.1;Parent=gene-LU631_RS21585;Dbxref=Genbank:WP_016191120.1;Name=WP_016191120.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS21585;product=hypothetical protein;protein_id=WP_016191120.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4101024 4101716 . - . ID=gene-LU631_RS21590;Name=LU631_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21590;old_locus_tag=LU631_21590 NZ_CP089940.1 Protein Homology CDS 4101024 4101716 . - 0 ID=cds-WP_016191119.1;Parent=gene-LU631_RS21590;Dbxref=Genbank:WP_016191119.1;Name=WP_016191119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827849.1;locus_tag=LU631_RS21590;product=Gp138 family membrane-puncturing spike protein;protein_id=WP_016191119.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4101720 4102535 . - . ID=gene-LU631_RS21595;Name=LU631_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21595;old_locus_tag=LU631_21595 NZ_CP089940.1 Protein Homology CDS 4101720 4102535 . - 0 ID=cds-WP_016191118.1;Parent=gene-LU631_RS21595;Dbxref=Genbank:WP_016191118.1;Name=WP_016191118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191118.1;locus_tag=LU631_RS21595;product=hypothetical protein;protein_id=WP_016191118.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4102528 4102821 . - . ID=gene-LU631_RS21600;Name=LU631_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21600;old_locus_tag=LU631_21600 NZ_CP089940.1 Protein Homology CDS 4102528 4102821 . - 0 ID=cds-WP_014544090.1;Parent=gene-LU631_RS21600;Dbxref=Genbank:WP_014544090.1;Name=WP_014544090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544090.1;locus_tag=LU631_RS21600;product=hypothetical protein;protein_id=WP_014544090.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4102827 4103336 . - . ID=gene-LU631_RS21605;Name=LU631_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21605;old_locus_tag=LU631_21605 NZ_CP089940.1 Protein Homology CDS 4102827 4103336 . - 0 ID=cds-WP_016191117.1;Parent=gene-LU631_RS21605;Dbxref=Genbank:WP_016191117.1;Name=WP_016191117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668077.1;locus_tag=LU631_RS21605;product=hypothetical protein;protein_id=WP_016191117.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4103333 4105021 . - . ID=gene-LU631_RS21610;Name=LU631_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21610;old_locus_tag=LU631_21610 NZ_CP089940.1 Protein Homology CDS 4103333 4105021 . - 0 ID=cds-WP_016191116.1;Parent=gene-LU631_RS21610;Dbxref=Genbank:WP_016191116.1;Name=WP_016191116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544088.1;locus_tag=LU631_RS21610;product=hypothetical protein;protein_id=WP_016191116.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4105104 4105562 . - . ID=gene-LU631_RS21615;Name=LU631_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21615;old_locus_tag=LU631_21615 NZ_CP089940.1 Protein Homology CDS 4105104 4105562 . - 0 ID=cds-WP_016191115.1;Parent=gene-LU631_RS21615;Dbxref=Genbank:WP_016191115.1;Name=WP_016191115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544087.1;locus_tag=LU631_RS21615;product=hypothetical protein;protein_id=WP_016191115.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4105694 4106224 . + . ID=gene-LU631_RS21620;Name=LU631_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21620;old_locus_tag=LU631_21620 NZ_CP089940.1 Protein Homology CDS 4105694 4106224 . + 0 ID=cds-WP_016191114.1;Parent=gene-LU631_RS21620;Dbxref=Genbank:WP_016191114.1;Name=WP_016191114.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021872.2;locus_tag=LU631_RS21620;product=DUF2441 domain-containing protein;protein_id=WP_016191114.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4106202 4106390 . - . ID=gene-LU631_RS21625;Name=LU631_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21625;old_locus_tag=LU631_21625 NZ_CP089940.1 GeneMarkS-2+ CDS 4106202 4106390 . - 0 ID=cds-WP_016191113.1;Parent=gene-LU631_RS21625;Dbxref=Genbank:WP_016191113.1;Name=WP_016191113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS21625;product=hypothetical protein;protein_id=WP_016191113.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4106451 4106903 . - . ID=gene-LU631_RS21630;Name=LU631_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21630;old_locus_tag=LU631_21630 NZ_CP089940.1 Protein Homology CDS 4106451 4106903 . - 0 ID=cds-WP_016191112.1;Parent=gene-LU631_RS21630;Dbxref=Genbank:WP_016191112.1;Name=WP_016191112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368088.1;locus_tag=LU631_RS21630;product=hypothetical protein;protein_id=WP_016191112.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4106914 4108401 . - . ID=gene-LU631_RS21635;Name=LU631_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21635;old_locus_tag=LU631_21635 NZ_CP089940.1 Protein Homology CDS 4106914 4108401 . - 0 ID=cds-WP_016191111.1;Parent=gene-LU631_RS21635;Dbxref=Genbank:WP_016191111.1;Name=WP_016191111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668073.1;locus_tag=LU631_RS21635;product=DUF3383 domain-containing protein;protein_id=WP_016191111.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4108540 4109708 . - . ID=gene-LU631_RS21640;Name=LU631_RS21640;end_range=4109708,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21640;old_locus_tag=LU631_21640;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4108540 4109708 . - 0 ID=cds-LU631_RS21640;Parent=gene-LU631_RS21640;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=4109708,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS21640;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4109902 4110237 . + . ID=gene-LU631_RS21645;Name=LU631_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21645;old_locus_tag=LU631_21645 NZ_CP089940.1 GeneMarkS-2+ CDS 4109902 4110237 . + 0 ID=cds-WP_052734695.1-14;Parent=gene-LU631_RS21645;Dbxref=Genbank:WP_052734695.1;Name=WP_052734695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS21645;product=hypothetical protein;protein_id=WP_052734695.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4110246 4111016 . + . ID=gene-LU631_RS26225;Name=LU631_RS26225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26225 NZ_CP089940.1 Protein Homology CDS 4110246 4111016 . + 0 ID=cds-WP_267921497.1-10;Parent=gene-LU631_RS26225;Dbxref=Genbank:WP_267921497.1;Name=WP_267921497.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26225;product=transposase zinc-binding domain-containing protein;protein_id=WP_267921497.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4111028 4111459 . + . ID=gene-LU631_RS26230;Name=LU631_RS26230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26230 NZ_CP089940.1 Protein Homology CDS 4111028 4111459 . + 0 ID=cds-WP_046372013.1-9;Parent=gene-LU631_RS26230;Dbxref=Genbank:WP_046372013.1;Name=WP_046372013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26230;product=IS91 family transposase;protein_id=WP_046372013.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4111605 4111757 . + . ID=gene-LU631_RS21655;Name=LU631_RS21655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21655;old_locus_tag=LU631_21655;partial=true;pseudo=true;start_range=.,4111605 NZ_CP089940.1 Protein Homology CDS 4111605 4111757 . + 0 ID=cds-LU631_RS21655;Parent=gene-LU631_RS21655;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000521508.1;locus_tag=LU631_RS21655;partial=true;product=DNA-binding protein;pseudo=true;start_range=.,4111605;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4111754 4111924 . + . ID=gene-LU631_RS21660;Name=LU631_RS21660;end_range=4111924,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21660;old_locus_tag=LU631_21660;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4111754 4111924 . + 0 ID=cds-LU631_RS21660;Parent=gene-LU631_RS21660;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4111924,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001350501.1;locus_tag=LU631_RS21660;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4111935 4112729 . + . ID=gene-LU631_RS21665;Name=LU631_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21665;old_locus_tag=LU631_21665 NZ_CP089940.1 GeneMarkS-2+ CDS 4111935 4112729 . + 0 ID=cds-WP_016191107.1;Parent=gene-LU631_RS21665;Dbxref=Genbank:WP_016191107.1;Name=WP_016191107.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS21665;product=hypothetical protein;protein_id=WP_016191107.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4112833 4112898 . + . ID=gene-LU631_RS26235;Name=LU631_RS26235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS26235;partial=true;pseudo=true;start_range=.,4112833 NZ_CP089940.1 Protein Homology CDS 4112833 4112898 . + 0 ID=cds-LU631_RS26235;Parent=gene-LU631_RS26235;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025339.2;locus_tag=LU631_RS26235;partial=true;product=DUF4222 domain-containing protein;pseudo=true;start_range=.,4112833;transl_table=11 NZ_CP089940.1 RefSeq gene 4113077 4113784 . + . ID=gene-LU631_RS21675;Name=LU631_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21675;old_locus_tag=LU631_21675 NZ_CP089940.1 Protein Homology CDS 4113077 4113784 . + 0 ID=cds-WP_046372024.1-3;Parent=gene-LU631_RS21675;Dbxref=Genbank:WP_046372024.1;Name=WP_046372024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308877.1;locus_tag=LU631_RS21675;product=M91 family zinc metallopeptidase;protein_id=WP_046372024.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4113818 4115038 . + . ID=gene-LU631_RS21680;Name=LU631_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21680;old_locus_tag=LU631_21680 NZ_CP089940.1 Protein Homology CDS 4113818 4115038 . + 0 ID=cds-WP_046371929.1-7;Parent=gene-LU631_RS21680;Dbxref=Genbank:WP_046371929.1;Name=WP_046371929.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343765.1;locus_tag=LU631_RS21680;product=ISL3 family transposase;protein_id=WP_046371929.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4115090 4116130 . - . ID=gene-LU631_RS21685;Name=LU631_RS21685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21685;old_locus_tag=LU631_21685;pseudo=true NZ_CP089940.1 Protein Homology CDS 4115090 4116130 . - 0 ID=cds-LU631_RS21685;Parent=gene-LU631_RS21685;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS21685;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4116209 4116394 . - . ID=gene-LU631_RS21690;Name=LU631_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21690;old_locus_tag=LU631_21690 NZ_CP089940.1 GeneMarkS-2+ CDS 4116209 4116394 . - 0 ID=cds-WP_016191105.1;Parent=gene-LU631_RS21690;Dbxref=Genbank:WP_016191105.1;Name=WP_016191105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS21690;product=BrnA antitoxin family protein;protein_id=WP_016191105.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4116398 4116748 . - . ID=gene-LU631_RS21695;Name=LU631_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21695;old_locus_tag=LU631_21695 NZ_CP089940.1 Protein Homology CDS 4116398 4116748 . - 0 ID=cds-WP_016191104.1;Parent=gene-LU631_RS21695;Dbxref=Genbank:WP_016191104.1;Name=WP_016191104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000860148.1;locus_tag=LU631_RS21695;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_016191104.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4116753 4117034 . - . ID=gene-LU631_RS21700;Name=LU631_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21700;old_locus_tag=LU631_21700 NZ_CP089940.1 Protein Homology CDS 4116753 4117034 . - 0 ID=cds-WP_016191103.1;Parent=gene-LU631_RS21700;Dbxref=Genbank:WP_016191103.1;Name=WP_016191103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376234.1;locus_tag=LU631_RS21700;product=DUF6516 family protein;protein_id=WP_016191103.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4117883 4118278 . + . ID=gene-LU631_RS21705;Name=LU631_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21705;old_locus_tag=LU631_21705 NZ_CP089940.1 Protein Homology CDS 4117883 4118278 . + 0 ID=cds-WP_052734708.1;Parent=gene-LU631_RS21705;Dbxref=Genbank:WP_052734708.1;Name=WP_052734708.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02681.1;locus_tag=LU631_RS21705;product=Rha family transcriptional regulator;protein_id=WP_052734708.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4118496 4119506 . - . ID=gene-LU631_RS21710;Name=LU631_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21710;old_locus_tag=LU631_21710 NZ_CP089940.1 Protein Homology CDS 4118496 4119506 . - 0 ID=cds-WP_046372055.1;Parent=gene-LU631_RS21710;Dbxref=Genbank:WP_046372055.1;Name=WP_046372055.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487120.1;locus_tag=LU631_RS21710;product=IS110 family transposase;protein_id=WP_046372055.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4119731 4119847 . + . ID=gene-LU631_RS21715;Name=LU631_RS21715;end_range=4119847,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21715;old_locus_tag=LU631_21715;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4119731 4119847 . + 0 ID=cds-LU631_RS21715;Parent=gene-LU631_RS21715;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4119847,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015740894.1;locus_tag=LU631_RS21715;partial=true;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4119850 4121002 . - . ID=gene-LU631_RS21720;Name=LU631_RS21720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21720;old_locus_tag=LU631_21720;pseudo=true NZ_CP089940.1 Protein Homology CDS 4119850 4121002 . - 0 ID=cds-LU631_RS21720;Parent=gene-LU631_RS21720;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611429.1;locus_tag=LU631_RS21720;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4121075 4121272 . + . ID=gene-LU631_RS21725;Name=LU631_RS21725;end_range=4121272,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21725;old_locus_tag=LU631_21725;partial=true;pseudo=true;start_range=.,4121075 NZ_CP089940.1 Protein Homology CDS 4121075 4121272 . + 0 ID=cds-LU631_RS21725;Parent=gene-LU631_RS21725;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4121272,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104949.1;locus_tag=LU631_RS21725;partial=true;product=GntR family transcriptional regulator;pseudo=true;start_range=.,4121075;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4121386 4121826 . + . ID=gene-LU631_RS21730;Name=tnpA;end_range=4121826,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS21730;old_locus_tag=LU631_21730;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4121386 4121826 . + 0 ID=cds-LU631_RS21730;Parent=gene-LU631_RS21730;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=4121826,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU631_RS21730;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4121908 4122186 . + . ID=gene-LU631_RS21735;Name=LU631_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21735;old_locus_tag=LU631_21735 NZ_CP089940.1 Protein Homology CDS 4121908 4122186 . + 0 ID=cds-WP_087949697.1;Parent=gene-LU631_RS21735;Dbxref=Genbank:WP_087949697.1;Name=WP_087949697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097100.1;locus_tag=LU631_RS21735;product=AlpA family phage regulatory protein;protein_id=WP_087949697.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4122207 4122806 . + . ID=gene-LU631_RS21740;Name=LU631_RS21740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21740;old_locus_tag=LU631_21740;pseudo=true NZ_CP089940.1 Protein Homology CDS 4122207 4122806 . + 0 ID=cds-LU631_RS21740;Parent=gene-LU631_RS21740;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004857951.1;locus_tag=LU631_RS21740;product=Rha family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4123029 4124068 . + . ID=gene-LU631_RS21745;Name=LU631_RS21745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21745;old_locus_tag=LU631_21745;pseudo=true NZ_CP089940.1 Protein Homology CDS 4123029 4124068 . + 0 ID=cds-LU631_RS21745;Parent=gene-LU631_RS21745;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS21745;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4124280 4125375 . - . ID=gene-LU631_RS21750;Name=LU631_RS21750;end_range=4125375,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21750;old_locus_tag=LU631_21750;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4124280 4125375 . - 0 ID=cds-LU631_RS21750;Parent=gene-LU631_RS21750;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=4125375,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS21750;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4125369 4125754 . - . ID=gene-LU631_RS21755;Name=LU631_RS21755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21755;old_locus_tag=LU631_21755;partial=true;pseudo=true;start_range=.,4125369 NZ_CP089940.1 Protein Homology CDS 4125369 4125754 . - 0 ID=cds-LU631_RS21755;Parent=gene-LU631_RS21755;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003570254.1;locus_tag=LU631_RS21755;partial=true;product=recombinase XerD;pseudo=true;start_range=.,4125369;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4125850 4128584 . - . ID=gene-LU631_RS21760;Name=LU631_RS21760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21760;old_locus_tag=LU631_21760;pseudo=true NZ_CP089940.1 Protein Homology CDS 4125850 4128584 . - 0 ID=cds-LU631_RS21760;Parent=gene-LU631_RS21760;Note=frameshifted;Ontology_term=GO:0006260,GO:0003677,GO:0003896,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA primase activity|0003896||IEA,zinc ion binding|0008270||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669395.1;locus_tag=LU631_RS21760;product=CHC2 zinc finger domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4128688 4129077 . + . ID=gene-LU631_RS21765;Name=LU631_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21765;old_locus_tag=LU631_21765 NZ_CP089940.1 Protein Homology CDS 4128688 4129077 . + 0 ID=cds-WP_052734737.1;Parent=gene-LU631_RS21765;Dbxref=Genbank:WP_052734737.1;Name=WP_052734737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543192.1;locus_tag=LU631_RS21765;product=helix-turn-helix transcriptional regulator;protein_id=WP_052734737.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4129159 4129473 . + . ID=gene-LU631_RS21770;Name=LU631_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21770;old_locus_tag=LU631_21770 NZ_CP089940.1 Protein Homology CDS 4129159 4129473 . + 0 ID=cds-WP_046372058.1;Parent=gene-LU631_RS21770;Dbxref=Genbank:WP_046372058.1;Name=WP_046372058.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543193.1;locus_tag=LU631_RS21770;product=SymE family type I addiction module toxin;protein_id=WP_046372058.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4129517 4129837 . - . ID=gene-LU631_RS21775;Name=LU631_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21775;old_locus_tag=LU631_21775 NZ_CP089940.1 GeneMarkS-2+ CDS 4129517 4129837 . - 0 ID=cds-WP_016191094.1;Parent=gene-LU631_RS21775;Dbxref=Genbank:WP_016191094.1;Name=WP_016191094.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS21775;product=hypothetical protein;protein_id=WP_016191094.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4130213 4130701 . - . ID=gene-LU631_RS21780;Name=LU631_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21780;old_locus_tag=LU631_21780 NZ_CP089940.1 Protein Homology CDS 4130213 4130701 . - 0 ID=cds-WP_016191092.1;Parent=gene-LU631_RS21780;Dbxref=Genbank:WP_016191092.1;Name=WP_016191092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000997835.1;locus_tag=LU631_RS21780;product=SMI1/KNR4 family protein;protein_id=WP_016191092.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4130712 4131068 . - . ID=gene-LU631_RS21785;Name=LU631_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21785;old_locus_tag=LU631_21785 NZ_CP089940.1 Protein Homology CDS 4130712 4131068 . - 0 ID=cds-WP_200896933.1;Parent=gene-LU631_RS21785;Dbxref=Genbank:WP_200896933.1;Name=WP_200896933.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026988.2;locus_tag=LU631_RS21785;product=hypothetical protein;protein_id=WP_200896933.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4131351 4131509 . - . ID=gene-LU631_RS21790;Name=LU631_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21790;old_locus_tag=LU631_21790 NZ_CP089940.1 GeneMarkS-2+ CDS 4131351 4131509 . - 0 ID=cds-WP_157275229.1;Parent=gene-LU631_RS21790;Dbxref=Genbank:WP_157275229.1;Name=WP_157275229.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS21790;product=hypothetical protein;protein_id=WP_157275229.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4131654 4131869 . - . ID=gene-LU631_RS21795;Name=LU631_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21795;old_locus_tag=LU631_21795 NZ_CP089940.1 GeneMarkS-2+ CDS 4131654 4131869 . - 0 ID=cds-WP_152664201.1;Parent=gene-LU631_RS21795;Dbxref=Genbank:WP_152664201.1;Name=WP_152664201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS21795;product=hypothetical protein;protein_id=WP_152664201.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4131922 4132905 . - . ID=gene-LU631_RS21800;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=LU631_RS21800;old_locus_tag=LU631_21800 NZ_CP089940.1 Protein Homology CDS 4131922 4132905 . - 0 ID=cds-WP_233482032.1;Parent=gene-LU631_RS21800;Dbxref=Genbank:WP_233482032.1;Name=WP_233482032.1;gbkey=CDS;gene=xerC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094903.1;locus_tag=LU631_RS21800;product=site-specific tyrosine recombinase XerC;protein_id=WP_233482032.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4132805 4135888 . - . ID=gene-LU631_RS21805;Name=LU631_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21805;old_locus_tag=LU631_21805 NZ_CP089940.1 Protein Homology CDS 4132805 4135888 . - 0 ID=cds-WP_233481946.1;Parent=gene-LU631_RS21805;Dbxref=Genbank:WP_233481946.1;Name=WP_233481946.1;Ontology_term=GO:0006260,GO:0003677,GO:0003896,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA primase activity|0003896||IEA,zinc ion binding|0008270||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543383.1;locus_tag=LU631_RS21805;product=CHC2 zinc finger domain-containing protein;protein_id=WP_233481946.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4135992 4136381 . + . ID=gene-LU631_RS21810;Name=LU631_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21810;old_locus_tag=LU631_21810 NZ_CP089940.1 Protein Homology CDS 4135992 4136381 . + 0 ID=cds-WP_052734737.1-2;Parent=gene-LU631_RS21810;Dbxref=Genbank:WP_052734737.1;Name=WP_052734737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543192.1;locus_tag=LU631_RS21810;product=helix-turn-helix transcriptional regulator;protein_id=WP_052734737.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4136463 4136777 . + . ID=gene-LU631_RS21815;Name=LU631_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21815;old_locus_tag=LU631_21815 NZ_CP089940.1 Protein Homology CDS 4136463 4136777 . + 0 ID=cds-WP_046372058.1-2;Parent=gene-LU631_RS21815;Dbxref=Genbank:WP_046372058.1;Name=WP_046372058.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543193.1;locus_tag=LU631_RS21815;product=SymE family type I addiction module toxin;protein_id=WP_046372058.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4136821 4137141 . - . ID=gene-LU631_RS21820;Name=LU631_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21820;old_locus_tag=LU631_21820 NZ_CP089940.1 GeneMarkS-2+ CDS 4136821 4137141 . - 0 ID=cds-WP_016191094.1-2;Parent=gene-LU631_RS21820;Dbxref=Genbank:WP_016191094.1;Name=WP_016191094.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS21820;product=hypothetical protein;protein_id=WP_016191094.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4137517 4138005 . - . ID=gene-LU631_RS21825;Name=LU631_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21825;old_locus_tag=LU631_21825 NZ_CP089940.1 Protein Homology CDS 4137517 4138005 . - 0 ID=cds-WP_016191092.1-2;Parent=gene-LU631_RS21825;Dbxref=Genbank:WP_016191092.1;Name=WP_016191092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000997835.1;locus_tag=LU631_RS21825;product=SMI1/KNR4 family protein;protein_id=WP_016191092.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4138016 4142542 . - . ID=gene-LU631_RS21830;Name=LU631_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21830;old_locus_tag=LU631_21830 NZ_CP089940.1 Protein Homology CDS 4138016 4142542 . - 0 ID=cds-WP_051124375.1;Parent=gene-LU631_RS21830;Dbxref=Genbank:WP_051124375.1;Name=WP_051124375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170793.1;locus_tag=LU631_RS21830;product=DUF6531 domain-containing protein;protein_id=WP_051124375.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4142546 4142984 . - . ID=gene-LU631_RS21835;Name=LU631_RS21835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS21835;old_locus_tag=LU631_21835;pseudo=true NZ_CP089940.1 Protein Homology CDS 4142546 4142984 . - 0 ID=cds-LU631_RS21835;Parent=gene-LU631_RS21835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200634.1;locus_tag=LU631_RS21835;product=DcrB-related protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4142981 4144908 . - . ID=gene-LU631_RS21840;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=pseudogene;locus_tag=LU631_RS21840;old_locus_tag=LU631_21840;pseudo=true NZ_CP089940.1 Protein Homology CDS 4142981 4144908 . - 0 ID=cds-LU631_RS21840;Parent=gene-LU631_RS21840;Note=frameshifted;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssI;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200633.1;locus_tag=LU631_RS21840;product=type VI secretion system tip protein TssI/VgrG;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4145294 4146679 . - . ID=gene-LU631_RS21845;Name=LU631_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21845;old_locus_tag=LU631_21845 NZ_CP089940.1 Protein Homology CDS 4145294 4146679 . - 0 ID=cds-WP_016191086.1;Parent=gene-LU631_RS21845;Dbxref=Genbank:WP_016191086.1;Name=WP_016191086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440385.1;locus_tag=LU631_RS21845;product=serine/threonine-protein kinase;protein_id=WP_016191086.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4146709 4149324 . - . ID=gene-LU631_RS21850;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=LU631_RS21850;old_locus_tag=LU631_21850 NZ_CP089940.1 Protein Homology CDS 4146709 4149324 . - 0 ID=cds-WP_016191085.1;Parent=gene-LU631_RS21850;Dbxref=Genbank:WP_016191085.1;Name=WP_016191085.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014729902.1;locus_tag=LU631_RS21850;product=type VI secretion system ATPase TssH;protein_id=WP_016191085.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4149747 4150508 . - . ID=gene-LU631_RS21855;Name=LU631_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21855;old_locus_tag=LU631_21855 NZ_CP089940.1 Protein Homology CDS 4149747 4150508 . - 0 ID=cds-WP_016191083.1;Parent=gene-LU631_RS21855;Dbxref=Genbank:WP_016191083.1;Name=WP_016191083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666996.1;locus_tag=LU631_RS21855;product=DUF4225 domain-containing protein;protein_id=WP_016191083.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4150555 4151607 . - . ID=gene-LU631_RS21860;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LU631_RS21860;old_locus_tag=LU631_21860 NZ_CP089940.1 Protein Homology CDS 4150555 4151607 . - 0 ID=cds-WP_016191082.1;Parent=gene-LU631_RS21860;Dbxref=Genbank:WP_016191082.1;Name=WP_016191082.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440381.1;locus_tag=LU631_RS21860;product=type VI secretion system baseplate subunit TssG;protein_id=WP_016191082.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4151604 4153481 . - . ID=gene-LU631_RS21865;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LU631_RS21865;old_locus_tag=LU631_21865 NZ_CP089940.1 Protein Homology CDS 4151604 4153481 . - 0 ID=cds-WP_016191081.1;Parent=gene-LU631_RS21865;Dbxref=Genbank:WP_016191081.1;Name=WP_016191081.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159879.1;locus_tag=LU631_RS21865;product=type VI secretion system baseplate subunit TssF;protein_id=WP_016191081.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4153484 4154059 . - . ID=gene-LU631_RS21870;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=LU631_RS21870;old_locus_tag=LU631_21870 NZ_CP089940.1 Protein Homology CDS 4153484 4154059 . - 0 ID=cds-WP_016191080.1;Parent=gene-LU631_RS21870;Dbxref=Genbank:WP_016191080.1;Name=WP_016191080.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200628.1;locus_tag=LU631_RS21870;product=type VI secretion system baseplate subunit TssE;protein_id=WP_016191080.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4154052 4154876 . - . ID=gene-LU631_RS21875;Name=LU631_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21875;old_locus_tag=LU631_21875 NZ_CP089940.1 Protein Homology CDS 4154052 4154876 . - 0 ID=cds-WP_016191079.1;Parent=gene-LU631_RS21875;Dbxref=Genbank:WP_016191079.1;Name=WP_016191079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666992.1;locus_tag=LU631_RS21875;product=type VI secretion system accessory protein TagJ;protein_id=WP_016191079.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4154902 4155954 . - . ID=gene-LU631_RS21880;Name=LU631_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21880;old_locus_tag=LU631_21880 NZ_CP089940.1 Protein Homology CDS 4154902 4155954 . - 0 ID=cds-WP_016191078.1;Parent=gene-LU631_RS21880;Dbxref=Genbank:WP_016191078.1;Name=WP_016191078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440377.1;locus_tag=LU631_RS21880;product=hypothetical protein;protein_id=WP_016191078.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4155973 4158000 . - . ID=gene-LU631_RS21885;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=LU631_RS21885;old_locus_tag=LU631_21885 NZ_CP089940.1 Protein Homology CDS 4155973 4158000 . - 0 ID=cds-WP_016191077.1;Parent=gene-LU631_RS21885;Dbxref=Genbank:WP_016191077.1;Name=WP_016191077.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tagH;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004163074.1;locus_tag=LU631_RS21885;product=type VI secretion system-associated FHA domain protein TagH;protein_id=WP_016191077.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4158257 4158532 . - . ID=gene-LU631_RS21890;Name=LU631_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21890;old_locus_tag=LU631_21890 NZ_CP089940.1 GeneMarkS-2+ CDS 4158257 4158532 . - 0 ID=cds-WP_016191076.1;Parent=gene-LU631_RS21890;Dbxref=Genbank:WP_016191076.1;Name=WP_016191076.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS21890;product=hypothetical protein;protein_id=WP_016191076.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4158683 4159380 . + . ID=gene-LU631_RS21895;Name=LU631_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21895;old_locus_tag=LU631_21895 NZ_CP089940.1 Protein Homology CDS 4158683 4158944 . + 0 ID=cds-WP_152664202.1;Parent=gene-LU631_RS21895;Dbxref=Genbank:WP_152664202.1;Name=WP_152664202.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS21895;product=IS1 family transposase;protein_id=WP_152664202.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 4158944 4159380 . + 2 ID=cds-WP_152664202.1;Parent=gene-LU631_RS21895;Dbxref=Genbank:WP_152664202.1;Name=WP_152664202.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS21895;product=IS1 family transposase;protein_id=WP_152664202.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4159388 4160104 . - . ID=gene-LU631_RS21900;Name=LU631_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21900;old_locus_tag=LU631_21900 NZ_CP089940.1 Protein Homology CDS 4159388 4160104 . - 0 ID=cds-WP_016191074.1;Parent=gene-LU631_RS21900;Dbxref=Genbank:WP_016191074.1;Name=WP_016191074.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013625.2;locus_tag=LU631_RS21900;product=peptidoglycan-binding protein;protein_id=WP_016191074.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4160201 4160680 . - . ID=gene-LU631_RS21905;Name=LU631_RS21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21905;old_locus_tag=LU631_21905 NZ_CP089940.1 Protein Homology CDS 4160201 4160680 . - 0 ID=cds-WP_016191073.1;Parent=gene-LU631_RS21905;Dbxref=Genbank:WP_016191073.1;Name=WP_016191073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366565.1;locus_tag=LU631_RS21905;product=type VI secretion system tube protein Hcp;protein_id=WP_016191073.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4161374 4162876 . - . ID=gene-LU631_RS21910;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LU631_RS21910;old_locus_tag=LU631_21910 NZ_CP089940.1 Protein Homology CDS 4161374 4162876 . - 0 ID=cds-WP_016191072.1;Parent=gene-LU631_RS21910;Dbxref=Genbank:WP_016191072.1;Name=WP_016191072.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542290.1;locus_tag=LU631_RS21910;product=type VI secretion system contractile sheath large subunit;protein_id=WP_016191072.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4162880 4163404 . - . ID=gene-LU631_RS21915;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=LU631_RS21915;old_locus_tag=LU631_21915 NZ_CP089940.1 Protein Homology CDS 4162880 4163404 . - 0 ID=cds-WP_016191071.1;Parent=gene-LU631_RS21915;Dbxref=Genbank:WP_016191071.1;Name=WP_016191071.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016495653.1;locus_tag=LU631_RS21915;product=type VI secretion system contractile sheath small subunit;protein_id=WP_016191071.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4163454 4164473 . - . ID=gene-LU631_RS21920;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=LU631_RS21920;old_locus_tag=LU631_21920 NZ_CP089940.1 Protein Homology CDS 4163454 4164473 . - 0 ID=cds-WP_016191070.1;Parent=gene-LU631_RS21920;Dbxref=Genbank:WP_016191070.1;Name=WP_016191070.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200618.1;locus_tag=LU631_RS21920;product=type VI secretion system protein TssA;protein_id=WP_016191070.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4164489 4165202 . - . ID=gene-LU631_RS21925;Name=tagF;gbkey=Gene;gene=tagF;gene_biotype=protein_coding;locus_tag=LU631_RS21925;old_locus_tag=LU631_21925 NZ_CP089940.1 Protein Homology CDS 4164489 4165202 . - 0 ID=cds-WP_016191069.1;Parent=gene-LU631_RS21925;Dbxref=Genbank:WP_016191069.1;Name=WP_016191069.1;gbkey=CDS;gene=tagF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004385967.1;locus_tag=LU631_RS21925;product=type VI secretion system-associated protein TagF;protein_id=WP_016191069.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4165219 4168842 . - . ID=gene-LU631_RS21930;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=LU631_RS21930;old_locus_tag=LU631_21930 NZ_CP089940.1 Protein Homology CDS 4165219 4168842 . - 0 ID=cds-WP_016191068.1;Parent=gene-LU631_RS21930;Dbxref=Genbank:WP_016191068.1;Name=WP_016191068.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssM;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666978.1;locus_tag=LU631_RS21930;product=type VI secretion system membrane subunit TssM;protein_id=WP_016191068.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4168846 4170063 . - . ID=gene-LU631_RS21935;Name=LU631_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21935;old_locus_tag=LU631_21935 NZ_CP089940.1 Protein Homology CDS 4168846 4170063 . - 0 ID=cds-WP_040465550.1;Parent=gene-LU631_RS21935;Dbxref=Genbank:WP_040465550.1;Name=WP_040465550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502648.1;locus_tag=LU631_RS21935;product=DotU family type VI secretion system protein;protein_id=WP_040465550.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4170099 4171442 . - . ID=gene-LU631_RS21940;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=pseudogene;locus_tag=LU631_RS21940;old_locus_tag=LU631_21940;pseudo=true NZ_CP089940.1 Protein Homology CDS 4170099 4171442 . - 0 ID=cds-LU631_RS21940;Parent=gene-LU631_RS21940;Note=internal stop;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159916.1;locus_tag=LU631_RS21940;product=type VI secretion system baseplate subunit TssK;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4171439 4171975 . - . ID=gene-LU631_RS21945;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LU631_RS21945;old_locus_tag=LU631_21945 NZ_CP089940.1 Protein Homology CDS 4171439 4171975 . - 0 ID=cds-WP_016191065.1;Parent=gene-LU631_RS21945;Dbxref=Genbank:WP_016191065.1;Name=WP_016191065.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159922.1;locus_tag=LU631_RS21945;product=type VI secretion system lipoprotein TssJ;protein_id=WP_016191065.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4172000 4172500 . - . ID=gene-LU631_RS21950;Name=LU631_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21950;old_locus_tag=LU631_21950 NZ_CP089940.1 Protein Homology CDS 4172000 4172500 . - 0 ID=cds-WP_016191064.1;Parent=gene-LU631_RS21950;Dbxref=Genbank:WP_016191064.1;Name=WP_016191064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004164804.1;locus_tag=LU631_RS21950;product=hypothetical protein;protein_id=WP_016191064.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4173422 4174102 . - . ID=gene-LU631_RS21955;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=LU631_RS21955;old_locus_tag=LU631_21955 NZ_CP089940.1 Protein Homology CDS 4173422 4174102 . - 0 ID=cds-WP_016191063.1;Parent=gene-LU631_RS21955;Dbxref=Genbank:WP_016191063.1;Name=WP_016191063.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170827.1;locus_tag=LU631_RS21955;product=pyrimidine 5'-nucleotidase;protein_id=WP_016191063.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4174173 4174613 . - . ID=gene-LU631_RS21960;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=LU631_RS21960;old_locus_tag=LU631_21960 NZ_CP089940.1 Protein Homology CDS 4174173 4174613 . - 0 ID=cds-WP_016191062.1;Parent=gene-LU631_RS21960;Dbxref=Genbank:WP_016191062.1;Name=WP_016191062.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666972.1;locus_tag=LU631_RS21960;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_016191062.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4174582 4174995 . - . ID=gene-LU631_RS21965;Name=LU631_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21965;old_locus_tag=LU631_21965 NZ_CP089940.1 Protein Homology CDS 4174582 4174995 . - 0 ID=cds-WP_040465549.1;Parent=gene-LU631_RS21965;Dbxref=Genbank:WP_040465549.1;Name=WP_040465549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209207.1;locus_tag=LU631_RS21965;product=DNA polymerase III subunit psi;protein_id=WP_040465549.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4175135 4176163 . + . ID=gene-LU631_RS21970;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=LU631_RS21970;old_locus_tag=LU631_21970 NZ_CP089940.1 Protein Homology CDS 4175135 4176163 . + 0 ID=cds-WP_016191060.1;Parent=gene-LU631_RS21970;Dbxref=Genbank:WP_016191060.1;Name=WP_016191060.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004886503.1;locus_tag=LU631_RS21970;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_016191060.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4176267 4176779 . - . ID=gene-LU631_RS21975;Name=LU631_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21975;old_locus_tag=LU631_21975 NZ_CP089940.1 GeneMarkS-2+ CDS 4176267 4176779 . - 0 ID=cds-WP_016191059.1;Parent=gene-LU631_RS21975;Dbxref=Genbank:WP_016191059.1;Name=WP_016191059.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS21975;product=hypothetical protein;protein_id=WP_016191059.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4177069 4177155 . + . ID=gene-LU631_RS21980;Name=LU631_RS21980;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS21980;old_locus_tag=LU631_21980 NZ_CP089940.1 tRNAscan-SE tRNA 4177069 4177155 . + . ID=rna-LU631_RS21980;Parent=gene-LU631_RS21980;anticodon=(pos:4177103..4177105);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS21980;product=tRNA-Leu NZ_CP089940.1 tRNAscan-SE exon 4177069 4177155 . + . ID=exon-LU631_RS21980-1;Parent=rna-LU631_RS21980;anticodon=(pos:4177103..4177105);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS21980;product=tRNA-Leu NZ_CP089940.1 RefSeq gene 4177188 4177274 . + . ID=gene-LU631_RS21985;Name=LU631_RS21985;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS21985;old_locus_tag=LU631_21985 NZ_CP089940.1 tRNAscan-SE tRNA 4177188 4177274 . + . ID=rna-LU631_RS21985;Parent=gene-LU631_RS21985;anticodon=(pos:4177222..4177224);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS21985;product=tRNA-Leu NZ_CP089940.1 tRNAscan-SE exon 4177188 4177274 . + . ID=exon-LU631_RS21985-1;Parent=rna-LU631_RS21985;anticodon=(pos:4177222..4177224);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS21985;product=tRNA-Leu NZ_CP089940.1 RefSeq gene 4177307 4177393 . + . ID=gene-LU631_RS21990;Name=LU631_RS21990;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS21990;old_locus_tag=LU631_21990 NZ_CP089940.1 tRNAscan-SE tRNA 4177307 4177393 . + . ID=rna-LU631_RS21990;Parent=gene-LU631_RS21990;anticodon=(pos:4177341..4177343);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS21990;product=tRNA-Leu NZ_CP089940.1 tRNAscan-SE exon 4177307 4177393 . + . ID=exon-LU631_RS21990-1;Parent=rna-LU631_RS21990;anticodon=(pos:4177341..4177343);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS21990;product=tRNA-Leu NZ_CP089940.1 RefSeq gene 4177482 4177757 . - . ID=gene-LU631_RS21995;Name=LU631_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS21995;old_locus_tag=LU631_21995 NZ_CP089940.1 Protein Homology CDS 4177482 4177757 . - 0 ID=cds-WP_016191057.1;Parent=gene-LU631_RS21995;Dbxref=Genbank:WP_016191057.1;Name=WP_016191057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800972.1;locus_tag=LU631_RS21995;product=DUF1435 domain-containing protein;protein_id=WP_016191057.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4177845 4178099 . + . ID=gene-LU631_RS22000;Name=LU631_RS22000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22000;old_locus_tag=LU631_22000;partial=true;pseudo=true;start_range=.,4177845 NZ_CP089940.1 Protein Homology CDS 4177845 4178099 . + 0 ID=cds-LU631_RS22000;Parent=gene-LU631_RS22000;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800973.1;locus_tag=LU631_RS22000;partial=true;product=diguanylate cyclase;pseudo=true;start_range=.,4177845;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4178181 4178879 . + . ID=gene-LU631_RS22005;Name=LU631_RS22005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22005;old_locus_tag=LU631_22005;pseudo=true NZ_CP089940.1 Protein Homology CDS 4178181 4178879 . + 0 ID=cds-LU631_RS22005;Parent=gene-LU631_RS22005;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=LU631_RS22005;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4179287 4179730 . + . ID=gene-LU631_RS22010;Name=LU631_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22010;old_locus_tag=LU631_22010 NZ_CP089940.1 GeneMarkS-2+ CDS 4179287 4179730 . + 0 ID=cds-WP_232426860.1;Parent=gene-LU631_RS22010;Dbxref=Genbank:WP_232426860.1;Name=WP_232426860.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS22010;product=hypothetical protein;protein_id=WP_232426860.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4179681 4180007 . + . ID=gene-LU631_RS22015;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=LU631_RS22015;old_locus_tag=LU631_22015 NZ_CP089940.1 Protein Homology CDS 4179681 4180007 . + 0 ID=cds-WP_232426859.1;Parent=gene-LU631_RS22015;Dbxref=Genbank:WP_232426859.1;Name=WP_232426859.1;Ontology_term=GO:0033214,GO:0008199,GO:0016491,GO:0051537;gbkey=CDS;gene=fhuF;go_function=ferric iron binding|0008199||IEA,oxidoreductase activity|0016491||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=siderophore-dependent iron import into cell|0033214||IEA;inference=COORDINATES: protein motif:HMM:TIGR03951.1;locus_tag=LU631_RS22015;product=siderophore-iron reductase FhuF;protein_id=WP_232426859.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4180079 4180552 . + . ID=gene-LU631_RS22020;Name=LU631_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22020;old_locus_tag=LU631_22020 NZ_CP089940.1 Protein Homology CDS 4180079 4180552 . + 0 ID=cds-WP_016191055.1;Parent=gene-LU631_RS22020;Dbxref=Genbank:WP_016191055.1;Name=WP_016191055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800975.1;locus_tag=LU631_RS22020;product=YbaK/EbsC family protein;protein_id=WP_016191055.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4180624 4181767 . - . ID=gene-LU631_RS22025;Name=LU631_RS22025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22025;old_locus_tag=LU631_22025;pseudo=true NZ_CP089940.1 Protein Homology CDS 4180624 4181767 . - 0 ID=cds-LU631_RS22025;Parent=gene-LU631_RS22025;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444076.1;locus_tag=LU631_RS22025;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4182007 4182444 . + . ID=gene-LU631_RS22030;Name=LU631_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22030;old_locus_tag=LU631_22030 NZ_CP089940.1 Protein Homology CDS 4182007 4182444 . + 0 ID=cds-WP_016191053.1;Parent=gene-LU631_RS22030;Dbxref=Genbank:WP_016191053.1;Name=WP_016191053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542306.1;locus_tag=LU631_RS22030;product=DUF2946 family protein;protein_id=WP_016191053.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4182520 4183986 . + . ID=gene-LU631_RS22035;Name=LU631_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22035;old_locus_tag=LU631_22035 NZ_CP089940.1 Protein Homology CDS 4182520 4183986 . + 0 ID=cds-WP_016191052.1;Parent=gene-LU631_RS22035;Dbxref=Genbank:WP_016191052.1;Name=WP_016191052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200601.1;locus_tag=LU631_RS22035;product=PepSY-associated TM helix domain-containing protein;protein_id=WP_016191052.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4184256 4184332 . + . ID=gene-LU631_RS22040;Name=LU631_RS22040;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS22040;old_locus_tag=LU631_22040 NZ_CP089940.1 tRNAscan-SE tRNA 4184256 4184332 . + . ID=rna-LU631_RS22040;Parent=gene-LU631_RS22040;anticodon=(pos:4184290..4184292);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS22040;product=tRNA-Ile NZ_CP089940.1 tRNAscan-SE exon 4184256 4184332 . + . ID=exon-LU631_RS22040-1;Parent=rna-LU631_RS22040;anticodon=(pos:4184290..4184292);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS22040;product=tRNA-Ile NZ_CP089940.1 RefSeq pseudogene 4184435 4185289 . - . ID=gene-LU631_RS22045;Name=LU631_RS22045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22045;old_locus_tag=LU631_22045;pseudo=true NZ_CP089940.1 Protein Homology CDS 4184435 4185289 . - 0 ID=cds-LU631_RS22045;Parent=gene-LU631_RS22045;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094385.1;locus_tag=LU631_RS22045;product=DUF4942 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4185286 4186406 . - . ID=gene-LU631_RS22050;Name=LU631_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22050;old_locus_tag=LU631_22050 NZ_CP089940.1 Protein Homology CDS 4186148 4186406 . - 0 ID=cds-WP_152664203.1;Parent=gene-LU631_RS22050;Dbxref=Genbank:WP_152664203.1;Name=WP_152664203.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS22050;product=IS3 family transposase;protein_id=WP_152664203.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 4185286 4186148 . - 2 ID=cds-WP_152664203.1;Parent=gene-LU631_RS22050;Dbxref=Genbank:WP_152664203.1;Name=WP_152664203.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU631_RS22050;product=IS3 family transposase;protein_id=WP_152664203.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4186475 4186747 . - . ID=gene-LU631_RS22055;Name=LU631_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22055;old_locus_tag=LU631_22055 NZ_CP089940.1 GeneMarkS-2+ CDS 4186475 4186747 . - 0 ID=cds-WP_016191051.1;Parent=gene-LU631_RS22055;Dbxref=Genbank:WP_016191051.1;Name=WP_016191051.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS22055;product=HNH endonuclease;protein_id=WP_016191051.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4186961 4187119 . + . ID=gene-LU631_RS22060;Name=LU631_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22060;old_locus_tag=LU631_22060 NZ_CP089940.1 Protein Homology CDS 4186961 4187119 . + 0 ID=cds-WP_016191050.1;Parent=gene-LU631_RS22060;Dbxref=Genbank:WP_016191050.1;Name=WP_016191050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210363.1;locus_tag=LU631_RS22060;product=hypothetical protein;protein_id=WP_016191050.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4187116 4187730 . - . ID=gene-LU631_RS22065;Name=LU631_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22065;old_locus_tag=LU631_22065 NZ_CP089940.1 Protein Homology CDS 4187116 4187730 . - 0 ID=cds-WP_040465577.1;Parent=gene-LU631_RS22065;Dbxref=Genbank:WP_040465577.1;Name=WP_040465577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854369.1;locus_tag=LU631_RS22065;product=Fic family protein;protein_id=WP_040465577.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4187735 4187920 . - . ID=gene-LU631_RS22070;Name=LU631_RS22070;end_range=4187920,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22070;old_locus_tag=LU631_22070;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4187735 4187920 . - 0 ID=cds-LU631_RS22070;Parent=gene-LU631_RS22070;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4187920,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000290294.1;locus_tag=LU631_RS22070;partial=true;product=integrase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4187974 4188671 . + . ID=gene-LU631_RS22075;Name=LU631_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22075;old_locus_tag=LU631_22075 NZ_CP089940.1 Protein Homology CDS 4187974 4188235 . + 0 ID=cds-WP_233481947.1;Parent=gene-LU631_RS22075;Dbxref=Genbank:WP_233481947.1;Name=WP_233481947.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS22075;product=IS1 family transposase;protein_id=WP_233481947.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 4188235 4188671 . + 2 ID=cds-WP_233481947.1;Parent=gene-LU631_RS22075;Dbxref=Genbank:WP_233481947.1;Name=WP_233481947.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS22075;product=IS1 family transposase;protein_id=WP_233481947.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4189049 4190588 . + . ID=gene-LU631_RS22080;Name=LU631_RS22080;end_range=4190588,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22080;old_locus_tag=LU631_22080;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4189049 4190588 . + 0 ID=cds-LU631_RS22080;Parent=gene-LU631_RS22080;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0007165,GO:0016020;end_range=4190588,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593586.1;locus_tag=LU631_RS22080;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4190966 4191178 . + . ID=gene-LU631_RS22085;Name=LU631_RS22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22085;old_locus_tag=LU631_22085 NZ_CP089940.1 GeneMarkS-2+ CDS 4190966 4191178 . + 0 ID=cds-WP_016191046.1;Parent=gene-LU631_RS22085;Dbxref=Genbank:WP_016191046.1;Name=WP_016191046.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS22085;product=hypothetical protein;protein_id=WP_016191046.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4191940 4192587 . + . ID=gene-LU631_RS22090;Name=LU631_RS22090;end_range=4192587,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22090;old_locus_tag=LU631_22090;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4191940 4192587 . + 0 ID=cds-LU631_RS22090;Parent=gene-LU631_RS22090;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=4192587,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS22090;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4192683 4194006 . - . ID=gene-LU631_RS22095;Name=LU631_RS22095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22095;old_locus_tag=LU631_22095;pseudo=true NZ_CP089940.1 Protein Homology CDS 4192683 4194006 . - 0 ID=cds-LU631_RS22095;Parent=gene-LU631_RS22095;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS22095;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4194605 4195609 . + . ID=gene-LU631_RS22100;Name=LU631_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22100;old_locus_tag=LU631_22100 NZ_CP089940.1 Protein Homology CDS 4194605 4195609 . + 0 ID=cds-WP_016191045.1;Parent=gene-LU631_RS22100;Dbxref=Genbank:WP_016191045.1;Name=WP_016191045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012885129.1;locus_tag=LU631_RS22100;product=iron ABC transporter substrate-binding protein;protein_id=WP_016191045.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4195709 4197205 . + . ID=gene-LU631_RS22105;Name=LU631_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22105;old_locus_tag=LU631_22105 NZ_CP089940.1 Protein Homology CDS 4195709 4197205 . + 0 ID=cds-WP_232426865.1;Parent=gene-LU631_RS22105;Dbxref=Genbank:WP_232426865.1;Name=WP_232426865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927638.1;locus_tag=LU631_RS22105;product=iron ABC transporter permease;protein_id=WP_232426865.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4197207 4198250 . + . ID=gene-LU631_RS22110;Name=LU631_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22110;old_locus_tag=LU631_22110 NZ_CP089940.1 Protein Homology CDS 4197207 4198250 . + 0 ID=cds-WP_016191043.1;Parent=gene-LU631_RS22110;Dbxref=Genbank:WP_016191043.1;Name=WP_016191043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014069211.1;locus_tag=LU631_RS22110;product=ABC transporter ATP-binding protein;protein_id=WP_016191043.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4198718 4199725 . - . ID=gene-LU631_RS22115;Name=LU631_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22115;old_locus_tag=LU631_22115 NZ_CP089940.1 Protein Homology CDS 4198718 4199725 . - 0 ID=cds-WP_016191042.1;Parent=gene-LU631_RS22115;Dbxref=Genbank:WP_016191042.1;Name=WP_016191042.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121657.1;locus_tag=LU631_RS22115;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_016191042.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4199729 4200151 . - . ID=gene-LU631_RS22120;Name=LU631_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22120;old_locus_tag=LU631_22120 NZ_CP089940.1 Protein Homology CDS 4199729 4200151 . - 0 ID=cds-WP_016191041.1;Parent=gene-LU631_RS22120;Dbxref=Genbank:WP_016191041.1;Name=WP_016191041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668627.1;locus_tag=LU631_RS22120;product=hypothetical protein;protein_id=WP_016191041.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4200148 4200840 . - . ID=gene-LU631_RS22125;Name=LU631_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22125;old_locus_tag=LU631_22125 NZ_CP089940.1 Protein Homology CDS 4200148 4200840 . - 0 ID=cds-WP_016191040.1;Parent=gene-LU631_RS22125;Dbxref=Genbank:WP_016191040.1;Name=WP_016191040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539164.1;locus_tag=LU631_RS22125;product=hypothetical protein;protein_id=WP_016191040.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4200912 4201127 . - . ID=gene-LU631_RS26240;Name=LU631_RS26240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26240 NZ_CP089940.1 Protein Homology CDS 4200912 4201127 . - 0 ID=cds-WP_252120244.1;Parent=gene-LU631_RS26240;Dbxref=Genbank:WP_252120244.1;Name=WP_252120244.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016769.2;locus_tag=LU631_RS26240;product=hypothetical protein;protein_id=WP_252120244.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4201109 4201162 . - . ID=gene-LU631_RS26245;Name=LU631_RS26245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26245 NZ_CP089940.1 Protein Homology CDS 4201109 4201162 . - 0 ID=cds-WP_252120245.1;Parent=gene-LU631_RS26245;Dbxref=Genbank:WP_252120245.1;Name=WP_252120245.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016769.2;locus_tag=LU631_RS26245;product=hypothetical protein;protein_id=WP_252120245.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4201409 4202818 . - . ID=gene-LU631_RS22135;Name=LU631_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22135;old_locus_tag=LU631_22135 NZ_CP089940.1 Protein Homology CDS 4201409 4202818 . - 0 ID=cds-WP_016191039.1;Parent=gene-LU631_RS22135;Dbxref=Genbank:WP_016191039.1;Name=WP_016191039.1;Ontology_term=GO:0005975,GO:0004564;gbkey=CDS;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010256926.1;locus_tag=LU631_RS22135;product=sucrose-6-phosphate hydrolase;protein_id=WP_016191039.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4202818 4204188 . - . ID=gene-LU631_RS22140;Name=LU631_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22140;old_locus_tag=LU631_22140 NZ_CP089940.1 Protein Homology CDS 4202818 4204188 . - 0 ID=cds-WP_016191038.1;Parent=gene-LU631_RS22140;Dbxref=Genbank:WP_016191038.1;Name=WP_016191038.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225625.1;locus_tag=LU631_RS22140;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_016191038.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4204254 4205816 . - . ID=gene-LU631_RS22145;Name=LU631_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22145;old_locus_tag=LU631_22145 NZ_CP089940.1 Protein Homology CDS 4204254 4205816 . - 0 ID=cds-WP_016191037.1;Parent=gene-LU631_RS22145;Dbxref=Genbank:WP_016191037.1;Name=WP_016191037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835630.1;locus_tag=LU631_RS22145;product=carbohydrate porin;protein_id=WP_016191037.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4205977 4206906 . - . ID=gene-LU631_RS22150;Name=LU631_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22150;old_locus_tag=LU631_22150 NZ_CP089940.1 Protein Homology CDS 4205977 4206906 . - 0 ID=cds-WP_016191036.1;Parent=gene-LU631_RS22150;Dbxref=Genbank:WP_016191036.1;Name=WP_016191036.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013512532.1;locus_tag=LU631_RS22150;product=aminoimidazole riboside kinase;protein_id=WP_016191036.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4207247 4209160 . + . ID=gene-LU631_RS22155;Name=LU631_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22155;old_locus_tag=LU631_22155 NZ_CP089940.1 Protein Homology CDS 4207247 4209160 . + 0 ID=cds-WP_016191035.1;Parent=gene-LU631_RS22155;Dbxref=Genbank:WP_016191035.1;Name=WP_016191035.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=LU631_RS22155;product=GGDEF domain-containing protein;protein_id=WP_016191035.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4209296 4209715 . - . ID=gene-LU631_RS22160;Name=LU631_RS22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22160;old_locus_tag=LU631_22160 NZ_CP089940.1 Protein Homology CDS 4209296 4209715 . - 0 ID=cds-WP_016191034.1;Parent=gene-LU631_RS22160;Dbxref=Genbank:WP_016191034.1;Name=WP_016191034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440297.1;locus_tag=LU631_RS22160;product=type III secretion system chaperone;protein_id=WP_016191034.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4209771 4215098 . - . ID=gene-LU631_RS22165;Name=LU631_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22165;old_locus_tag=LU631_22165 NZ_CP089940.1 Protein Homology CDS 4209771 4215098 . - 0 ID=cds-WP_016191033.1;Parent=gene-LU631_RS22165;Dbxref=Genbank:WP_016191033.1;Name=WP_016191033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168447.1;locus_tag=LU631_RS22165;product=AvrE-family type 3 secretion system effector;protein_id=WP_016191033.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4215416 4215703 . + . ID=gene-LU631_RS22170;Name=LU631_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22170;old_locus_tag=LU631_22170 NZ_CP089940.1 GeneMarkS-2+ CDS 4215416 4215703 . + 0 ID=cds-WP_051124373.1;Parent=gene-LU631_RS22170;Dbxref=Genbank:WP_051124373.1;Name=WP_051124373.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS22170;product=hypothetical protein;protein_id=WP_051124373.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4215815 4217050 . - . ID=gene-LU631_RS22175;Name=LU631_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22175;old_locus_tag=LU631_22175 NZ_CP089940.1 Protein Homology CDS 4215815 4217050 . - 0 ID=cds-WP_016191031.1;Parent=gene-LU631_RS22175;Dbxref=Genbank:WP_016191031.1;Name=WP_016191031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155371.1;locus_tag=LU631_RS22175;product=YopJ family acetyltransferase;protein_id=WP_016191031.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4217047 4217622 . - . ID=gene-LU631_RS22180;Name=LU631_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22180;old_locus_tag=LU631_22180 NZ_CP089940.1 Protein Homology CDS 4217047 4217622 . - 0 ID=cds-WP_232426857.1;Parent=gene-LU631_RS22180;Dbxref=Genbank:WP_232426857.1;Name=WP_232426857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168438.1;locus_tag=LU631_RS22180;product=type III secretion system chaperone;protein_id=WP_232426857.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4217624 4218988 . - . ID=gene-LU631_RS22185;Name=LU631_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22185;old_locus_tag=LU631_22185 NZ_CP089940.1 Protein Homology CDS 4217624 4218988 . - 0 ID=cds-WP_016191029.1;Parent=gene-LU631_RS22185;Dbxref=Genbank:WP_016191029.1;Name=WP_016191029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669299.1;locus_tag=LU631_RS22185;product=harpin HrpZ family protein;protein_id=WP_016191029.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4219178 4219528 . - . ID=gene-LU631_RS22190;Name=LU631_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22190;old_locus_tag=LU631_22190 NZ_CP089940.1 Protein Homology CDS 4219178 4219528 . - 0 ID=cds-WP_016191028.1;Parent=gene-LU631_RS22190;Dbxref=Genbank:WP_016191028.1;Name=WP_016191028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155368.1;locus_tag=LU631_RS22190;product=hypothetical protein;protein_id=WP_016191028.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4219521 4219715 . - . ID=gene-LU631_RS22195;Name=LU631_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22195;old_locus_tag=LU631_22195 NZ_CP089940.1 Protein Homology CDS 4219521 4219715 . - 0 ID=cds-WP_040465572.1;Parent=gene-LU631_RS22195;Dbxref=Genbank:WP_040465572.1;Name=WP_040465572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669301.1;locus_tag=LU631_RS22195;product=hypothetical protein;protein_id=WP_040465572.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4219730 4221754 . - . ID=gene-LU631_RS22200;Name=sctC;gbkey=Gene;gene=sctC;gene_biotype=protein_coding;locus_tag=LU631_RS22200;old_locus_tag=LU631_22200 NZ_CP089940.1 Protein Homology CDS 4219730 4221754 . - 0 ID=cds-WP_016191026.1;Parent=gene-LU631_RS22200;Dbxref=Genbank:WP_016191026.1;Name=WP_016191026.1;gbkey=CDS;gene=sctC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155366.1;locus_tag=LU631_RS22200;product=type III secretion system outer membrane ring subunit SctC;protein_id=WP_016191026.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4221747 4222178 . - . ID=gene-LU631_RS22205;Name=LU631_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22205;old_locus_tag=LU631_22205 NZ_CP089940.1 Protein Homology CDS 4221747 4222178 . - 0 ID=cds-WP_016191025.1;Parent=gene-LU631_RS22205;Dbxref=Genbank:WP_016191025.1;Name=WP_016191025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669303.1;locus_tag=LU631_RS22205;product=hypothetical protein;protein_id=WP_016191025.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4222165 4222401 . - . ID=gene-LU631_RS22210;Name=LU631_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22210;old_locus_tag=LU631_22210 NZ_CP089940.1 Protein Homology CDS 4222165 4222401 . - 0 ID=cds-WP_016191024.1;Parent=gene-LU631_RS22210;Dbxref=Genbank:WP_016191024.1;Name=WP_016191024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669304.1;locus_tag=LU631_RS22210;product=type III secretion system protein;protein_id=WP_016191024.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4222488 4223072 . - . ID=gene-LU631_RS22215;Name=sctL;gbkey=Gene;gene=sctL;gene_biotype=protein_coding;locus_tag=LU631_RS22215;old_locus_tag=LU631_22215 NZ_CP089940.1 Protein Homology CDS 4222488 4223072 . - 0 ID=cds-WP_016191023.1;Parent=gene-LU631_RS22215;Dbxref=Genbank:WP_016191023.1;Name=WP_016191023.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctL;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155363.1;locus_tag=LU631_RS22215;product=type III secretion system stator protein SctL;protein_id=WP_016191023.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4223066 4223656 . - . ID=gene-LU631_RS22220;Name=LU631_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22220;old_locus_tag=LU631_22220 NZ_CP089940.1 Protein Homology CDS 4223066 4223656 . - 0 ID=cds-WP_016191022.1;Parent=gene-LU631_RS22220;Dbxref=Genbank:WP_016191022.1;Name=WP_016191022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539469.1;locus_tag=LU631_RS22220;product=hypothetical protein;protein_id=WP_016191022.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4223649 4224425 . - . ID=gene-LU631_RS22225;Name=sctJ;gbkey=Gene;gene=sctJ;gene_biotype=protein_coding;locus_tag=LU631_RS22225;old_locus_tag=LU631_22225 NZ_CP089940.1 Protein Homology CDS 4223649 4224425 . - 0 ID=cds-WP_016191021.1;Parent=gene-LU631_RS22225;Dbxref=Genbank:WP_016191021.1;Name=WP_016191021.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctJ;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669307.1;locus_tag=LU631_RS22225;product=type III secretion inner membrane ring lipoprotein SctJ;protein_id=WP_016191021.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4224431 4224796 . - . ID=gene-LU631_RS22230;Name=LU631_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22230;old_locus_tag=LU631_22230 NZ_CP089940.1 Protein Homology CDS 4224431 4224796 . - 0 ID=cds-WP_016191020.1;Parent=gene-LU631_RS22230;Dbxref=Genbank:WP_016191020.1;Name=WP_016191020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440282.1;locus_tag=LU631_RS22230;product=EscI/YscI/HrpB family type III secretion system inner rod protein;protein_id=WP_016191020.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4224864 4225079 . - . ID=gene-LU631_RS22235;Name=LU631_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22235;old_locus_tag=LU631_22235 NZ_CP089940.1 Protein Homology CDS 4224864 4225079 . - 0 ID=cds-WP_040465546.1;Parent=gene-LU631_RS22235;Dbxref=Genbank:WP_040465546.1;Name=WP_040465546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168429.1;locus_tag=LU631_RS22235;product=hypothetical protein;protein_id=WP_040465546.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4225320 4226297 . - . ID=gene-LU631_RS22240;Name=LU631_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22240;old_locus_tag=LU631_22240 NZ_CP089940.1 Protein Homology CDS 4225320 4226297 . - 0 ID=cds-WP_016191018.1;Parent=gene-LU631_RS22240;Dbxref=Genbank:WP_016191018.1;Name=WP_016191018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155355.1;locus_tag=LU631_RS22240;product=sigma-54 dependent transcriptional regulator;protein_id=WP_016191018.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4226656 4227297 . - . ID=gene-LU631_RS22245;Name=LU631_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22245;old_locus_tag=LU631_22245 NZ_CP089940.1 Protein Homology CDS 4226656 4227297 . - 0 ID=cds-WP_016191017.1;Parent=gene-LU631_RS22245;Dbxref=Genbank:WP_016191017.1;Name=WP_016191017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543260.1;locus_tag=LU631_RS22245;product=response regulator transcription factor;protein_id=WP_016191017.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4227290 4228789 . - . ID=gene-LU631_RS22250;Name=LU631_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22250;old_locus_tag=LU631_22250 NZ_CP089940.1 Protein Homology CDS 4227290 4228789 . - 0 ID=cds-WP_016191016.1;Parent=gene-LU631_RS22250;Dbxref=Genbank:WP_016191016.1;Name=WP_016191016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543259.1;locus_tag=LU631_RS22250;product=PAS domain-containing sensor histidine kinase;protein_id=WP_016191016.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4228934 4229482 . - . ID=gene-LU631_RS22255;Name=LU631_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22255;old_locus_tag=LU631_22255 NZ_CP089940.1 Protein Homology CDS 4228934 4229482 . - 0 ID=cds-WP_016191015.1;Parent=gene-LU631_RS22255;Dbxref=Genbank:WP_016191015.1;Name=WP_016191015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440277.1;locus_tag=LU631_RS22255;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_016191015.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4229760 4230926 . + . ID=gene-LU631_RS22260;Name=sctW;gbkey=Gene;gene=sctW;gene_biotype=protein_coding;locus_tag=LU631_RS22260;old_locus_tag=LU631_22260 NZ_CP089940.1 Protein Homology CDS 4229760 4230926 . + 0 ID=cds-WP_016191014.1;Parent=gene-LU631_RS22260;Dbxref=Genbank:WP_016191014.1;Name=WP_016191014.1;Ontology_term=GO:0030254,GO:0050709,GO:0009986;gbkey=CDS;gene=sctW;go_component=cell surface|0009986||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA,negative regulation of protein secretion|0050709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155350.1;locus_tag=LU631_RS22260;product=type III secretion system gatekeeper subunit SctW;protein_id=WP_016191014.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4230927 4233080 . + . ID=gene-LU631_RS22265;Name=sctV;gbkey=Gene;gene=sctV;gene_biotype=protein_coding;locus_tag=LU631_RS22265;old_locus_tag=LU631_22265 NZ_CP089940.1 Protein Homology CDS 4230927 4233080 . + 0 ID=cds-WP_016191013.1;Parent=gene-LU631_RS22265;Dbxref=Genbank:WP_016191013.1;Name=WP_016191013.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=sctV;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171929.1;locus_tag=LU631_RS22265;product=type III secretion system export apparatus subunit SctV;protein_id=WP_016191013.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4233059 4233979 . + . ID=gene-LU631_RS22270;Name=sctD;gbkey=Gene;gene=sctD;gene_biotype=protein_coding;locus_tag=LU631_RS22270;old_locus_tag=LU631_22270 NZ_CP089940.1 Protein Homology CDS 4233059 4233979 . + 0 ID=cds-WP_016191012.1;Parent=gene-LU631_RS22270;Dbxref=Genbank:WP_016191012.1;Name=WP_016191012.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctD;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155348.1;locus_tag=LU631_RS22270;product=type III secretion system inner membrane ring subunit SctD;protein_id=WP_016191012.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4233973 4235340 . + . ID=gene-LU631_RS22275;Name=sctN;gbkey=Gene;gene=sctN;gene_biotype=protein_coding;locus_tag=LU631_RS22275;old_locus_tag=LU631_22275 NZ_CP089940.1 Protein Homology CDS 4233973 4235340 . + 0 ID=cds-WP_040465545.1;Parent=gene-LU631_RS22275;Dbxref=Genbank:WP_040465545.1;Name=WP_040465545.1;Ontology_term=GO:0030254,GO:0046961,GO:0030257;gbkey=CDS;gene=sctN;go_component=type III protein secretion system complex|0030257||IEA;go_function=proton-transporting ATPase activity%2C rotational mechanism|0046961||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440273.1;locus_tag=LU631_RS22275;product=type III secretion system ATPase SctN;protein_id=WP_040465545.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4235324 4235767 . + . ID=gene-LU631_RS22280;Name=LU631_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22280;old_locus_tag=LU631_22280 NZ_CP089940.1 Protein Homology CDS 4235324 4235767 . + 0 ID=cds-WP_016191010.1;Parent=gene-LU631_RS22280;Dbxref=Genbank:WP_016191010.1;Name=WP_016191010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155346.1;locus_tag=LU631_RS22280;product=hypothetical protein;protein_id=WP_016191010.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4235767 4236240 . + . ID=gene-LU631_RS22285;Name=LU631_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22285;old_locus_tag=LU631_22285 NZ_CP089940.1 Protein Homology CDS 4235767 4236240 . + 0 ID=cds-WP_016191009.1;Parent=gene-LU631_RS22285;Dbxref=Genbank:WP_016191009.1;Name=WP_016191009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155345.1;locus_tag=LU631_RS22285;product=type III secretion system HrpP C-terminal domain-containing protein;protein_id=WP_016191009.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4236237 4237286 . + . ID=gene-LU631_RS22290;Name=sctQ;gbkey=Gene;gene=sctQ;gene_biotype=protein_coding;locus_tag=LU631_RS22290;old_locus_tag=LU631_22290 NZ_CP089940.1 Protein Homology CDS 4236237 4237286 . + 0 ID=cds-WP_016191008.1;Parent=gene-LU631_RS22290;Dbxref=Genbank:WP_016191008.1;Name=WP_016191008.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctQ;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155343.1;locus_tag=LU631_RS22290;product=type III secretion system cytoplasmic ring protein SctQ;protein_id=WP_016191008.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4237283 4237936 . + . ID=gene-LU631_RS22295;Name=sctR;gbkey=Gene;gene=sctR;gene_biotype=protein_coding;locus_tag=LU631_RS22295;old_locus_tag=LU631_22295 NZ_CP089940.1 Protein Homology CDS 4237283 4237936 . + 0 ID=cds-WP_016191007.1;Parent=gene-LU631_RS22295;Dbxref=Genbank:WP_016191007.1;Name=WP_016191007.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctR;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168417.1;locus_tag=LU631_RS22295;product=type III secretion system export apparatus subunit SctR;protein_id=WP_016191007.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4237944 4238204 . + . ID=gene-LU631_RS22300;Name=sctS;gbkey=Gene;gene=sctS;gene_biotype=protein_coding;locus_tag=LU631_RS22300;old_locus_tag=LU631_22300 NZ_CP089940.1 Protein Homology CDS 4237944 4238204 . + 0 ID=cds-WP_016191006.1;Parent=gene-LU631_RS22300;Dbxref=Genbank:WP_016191006.1;Name=WP_016191006.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669322.1;locus_tag=LU631_RS22300;product=type III secretion system export apparatus subunit SctS;protein_id=WP_016191006.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4238206 4239003 . + . ID=gene-LU631_RS22305;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=LU631_RS22305;old_locus_tag=LU631_22305 NZ_CP089940.1 Protein Homology CDS 4238206 4239003 . + 0 ID=cds-WP_016191005.1;Parent=gene-LU631_RS22305;Dbxref=Genbank:WP_016191005.1;Name=WP_016191005.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctT;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171925.1;locus_tag=LU631_RS22305;product=type III secretion system export apparatus subunit SctT;protein_id=WP_016191005.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4239003 4240085 . + . ID=gene-LU631_RS22310;Name=sctU;gbkey=Gene;gene=sctU;gene_biotype=protein_coding;locus_tag=LU631_RS22310;old_locus_tag=LU631_22310 NZ_CP089940.1 Protein Homology CDS 4239003 4240085 . + 0 ID=cds-WP_016191004.1;Parent=gene-LU631_RS22310;Dbxref=Genbank:WP_016191004.1;Name=WP_016191004.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctU;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168416.1;locus_tag=LU631_RS22310;product=type III secretion system export apparatus subunit SctU;protein_id=WP_016191004.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4240189 4240638 . + . ID=gene-LU631_RS22315;Name=LU631_RS22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22315;old_locus_tag=LU631_22315 NZ_CP089940.1 Protein Homology CDS 4240189 4240638 . + 0 ID=cds-WP_016191003.1;Parent=gene-LU631_RS22315;Dbxref=Genbank:WP_016191003.1;Name=WP_016191003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669324.1;locus_tag=LU631_RS22315;product=GNAT family N-acetyltransferase;protein_id=WP_016191003.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4240960 4241343 . + . ID=gene-LU631_RS22320;Name=LU631_RS22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22320;old_locus_tag=LU631_22320 NZ_CP089940.1 Protein Homology CDS 4240960 4241343 . + 0 ID=cds-WP_016191002.1;Parent=gene-LU631_RS22320;Dbxref=Genbank:WP_016191002.1;Name=WP_016191002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168414.1;locus_tag=LU631_RS22320;product=acyl-CoA thioesterase;protein_id=WP_016191002.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4241685 4242014 . + . ID=gene-LU631_RS22325;Name=LU631_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22325;old_locus_tag=LU631_22325 NZ_CP089940.1 GeneMarkS-2+ CDS 4241685 4242014 . + 0 ID=cds-WP_016191001.1;Parent=gene-LU631_RS22325;Dbxref=Genbank:WP_016191001.1;Name=WP_016191001.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS22325;product=hypothetical protein;protein_id=WP_016191001.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4242102 4244402 . - . ID=gene-LU631_RS22330;Name=LU631_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22330;old_locus_tag=LU631_22330 NZ_CP089940.1 Protein Homology CDS 4242102 4244402 . - 0 ID=cds-WP_232426856.1;Parent=gene-LU631_RS22330;Dbxref=Genbank:WP_232426856.1;Name=WP_232426856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669329.1;locus_tag=LU631_RS22330;product=type III effector HrpK;protein_id=WP_232426856.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4244986 4246097 . + . ID=gene-LU631_RS22335;Name=LU631_RS22335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22335;old_locus_tag=LU631_22335;pseudo=true NZ_CP089940.1 Protein Homology CDS 4244986 4246097 . + 0 ID=cds-LU631_RS22335;Parent=gene-LU631_RS22335;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014333035.1;locus_tag=LU631_RS22335;product=diguanylate phosphodiesterase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4246148 4247187 . - . ID=gene-LU631_RS22340;Name=LU631_RS22340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22340;old_locus_tag=LU631_22340;pseudo=true NZ_CP089940.1 Protein Homology CDS 4246148 4247187 . - 0 ID=cds-LU631_RS22340;Parent=gene-LU631_RS22340;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS22340;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4247427 4247687 . - . ID=gene-LU631_RS22345;Name=LU631_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22345;old_locus_tag=LU631_22345 NZ_CP089940.1 Protein Homology CDS 4247427 4247687 . - 0 ID=cds-WP_157275228.1;Parent=gene-LU631_RS22345;Dbxref=Genbank:WP_157275228.1;Name=WP_157275228.1;Ontology_term=GO:0071468;gbkey=CDS;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: protein motif:HMM:NF022255.2;locus_tag=LU631_RS22345;product=biofilm development regulator YmgB/AriR family protein;protein_id=WP_157275228.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4247748 4248026 . - . ID=gene-LU631_RS22350;Name=LU631_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22350;old_locus_tag=LU631_22350 NZ_CP089940.1 GeneMarkS-2+ CDS 4247748 4248026 . - 0 ID=cds-WP_016190997.1;Parent=gene-LU631_RS22350;Dbxref=Genbank:WP_016190997.1;Name=WP_016190997.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS22350;product=hypothetical protein;protein_id=WP_016190997.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4248088 4248327 . - . ID=gene-LU631_RS22355;Name=ycgZ;gbkey=Gene;gene=ycgZ;gene_biotype=protein_coding;locus_tag=LU631_RS22355;old_locus_tag=LU631_22355 NZ_CP089940.1 Protein Homology CDS 4248088 4248327 . - 0 ID=cds-WP_016190996.1;Parent=gene-LU631_RS22355;Dbxref=Genbank:WP_016190996.1;Name=WP_016190996.1;gbkey=CDS;gene=ycgZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016495733.1;locus_tag=LU631_RS22355;product=regulatory protein YcgZ;protein_id=WP_016190996.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4249308 4249724 . - . ID=gene-LU631_RS22360;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS22360;old_locus_tag=LU631_22360 NZ_CP089940.1 Protein Homology CDS 4249308 4249724 . - 0 ID=cds-WP_016190995.1;Parent=gene-LU631_RS22360;Dbxref=Genbank:WP_016190995.1;Name=WP_016190995.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192772.1;locus_tag=LU631_RS22360;product=IS200/IS605 family transposase;protein_id=WP_016190995.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4249870 4251193 . - . ID=gene-LU631_RS22365;Name=LU631_RS22365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22365;old_locus_tag=LU631_22365;pseudo=true NZ_CP089940.1 Protein Homology CDS 4249870 4251193 . - 0 ID=cds-LU631_RS22365;Parent=gene-LU631_RS22365;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS22365;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4251347 4252771 . - . ID=gene-LU631_RS22370;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LU631_RS22370;old_locus_tag=LU631_22370 NZ_CP089940.1 Protein Homology CDS 4251347 4252771 . - 0 ID=cds-WP_016190993.1;Parent=gene-LU631_RS22370;Dbxref=Genbank:WP_016190993.1;Name=WP_016190993.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=LU631_RS22370;product=dihydrolipoyl dehydrogenase;protein_id=WP_016190993.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4252948 4254600 . - . ID=gene-LU631_RS22375;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=LU631_RS22375;old_locus_tag=LU631_22375 NZ_CP089940.1 Protein Homology CDS 4252948 4254600 . - 0 ID=cds-WP_016190992.1;Parent=gene-LU631_RS22375;Dbxref=Genbank:WP_016190992.1;Name=WP_016190992.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015698647.1;locus_tag=LU631_RS22375;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_016190992.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4254615 4257278 . - . ID=gene-LU631_RS22380;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=LU631_RS22380;old_locus_tag=LU631_22380 NZ_CP089940.1 Protein Homology CDS 4254615 4257278 . - 0 ID=cds-WP_016190991.1;Parent=gene-LU631_RS22380;Dbxref=Genbank:WP_016190991.1;Name=WP_016190991.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=LU631_RS22380;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_016190991.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4257437 4258201 . - . ID=gene-LU631_RS22385;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=LU631_RS22385;old_locus_tag=LU631_22385 NZ_CP089940.1 Protein Homology CDS 4257437 4258201 . - 0 ID=cds-WP_016190990.1;Parent=gene-LU631_RS22385;Dbxref=Genbank:WP_016190990.1;Name=WP_016190990.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216080.1;locus_tag=LU631_RS22385;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_016190990.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4258558 4259913 . + . ID=gene-LU631_RS22390;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=LU631_RS22390;old_locus_tag=LU631_22390 NZ_CP089940.1 Protein Homology CDS 4258558 4259913 . + 0 ID=cds-WP_016190989.1;Parent=gene-LU631_RS22390;Dbxref=Genbank:WP_016190989.1;Name=WP_016190989.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009092097.1;locus_tag=LU631_RS22390;product=aromatic amino acid transporter AroP;protein_id=WP_016190989.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4260086 4260783 . + . ID=gene-LU631_RS22395;Name=LU631_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22395;old_locus_tag=LU631_22395 NZ_CP089940.1 Protein Homology CDS 4260086 4260335 . + 0 ID=cds-WP_233481948.1;Parent=gene-LU631_RS22395;Dbxref=Genbank:WP_233481948.1;Name=WP_233481948.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS22395;product=IS1 family transposase;protein_id=WP_233481948.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 4260335 4260783 . + 2 ID=cds-WP_233481948.1;Parent=gene-LU631_RS22395;Dbxref=Genbank:WP_233481948.1;Name=WP_233481948.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS22395;product=IS1 family transposase;protein_id=WP_233481948.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4261415 4261681 . + . ID=gene-LU631_RS22400;Name=LU631_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22400;old_locus_tag=LU631_22400 NZ_CP089940.1 GeneMarkS-2+ CDS 4261415 4261681 . + 0 ID=cds-WP_016190988.1;Parent=gene-LU631_RS22400;Dbxref=Genbank:WP_016190988.1;Name=WP_016190988.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS22400;product=hypothetical protein;protein_id=WP_016190988.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4261736 4262571 . - . ID=gene-LU631_RS22405;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=pseudogene;locus_tag=LU631_RS22405;old_locus_tag=LU631_22405;pseudo=true NZ_CP089940.1 Protein Homology CDS 4261736 4262571 . - 0 ID=cds-LU631_RS22405;Parent=gene-LU631_RS22405;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002888694.1;locus_tag=LU631_RS22405;product=beta-lactamase regulator AmpE;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4262584 4263134 . - . ID=gene-LU631_RS22410;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=pseudogene;locus_tag=LU631_RS22410;old_locus_tag=LU631_22410;pseudo=true NZ_CP089940.1 Protein Homology CDS 4262584 4263134 . - 0 ID=cds-LU631_RS22410;Parent=gene-LU631_RS22410;Note=frameshifted;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000923695.1;locus_tag=LU631_RS22410;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4263285 4264172 . + . ID=gene-LU631_RS22415;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=LU631_RS22415;old_locus_tag=LU631_22415 NZ_CP089940.1 Protein Homology CDS 4263285 4264172 . + 0 ID=cds-WP_016190983.1;Parent=gene-LU631_RS22415;Dbxref=Genbank:WP_016190983.1;Name=WP_016190983.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542152.1;locus_tag=LU631_RS22415;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_016190983.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4264368 4264820 . + . ID=gene-LU631_RS22420;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=LU631_RS22420;old_locus_tag=LU631_22420 NZ_CP089940.1 Protein Homology CDS 4264368 4264820 . + 0 ID=cds-WP_016190982.1;Parent=gene-LU631_RS22420;Dbxref=Genbank:WP_016190982.1;Name=WP_016190982.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356781.1;locus_tag=LU631_RS22420;product=prepilin peptidase-dependent pilin;protein_id=WP_016190982.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4264820 4266223 . + . ID=gene-LU631_RS22425;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=LU631_RS22425;old_locus_tag=LU631_22425 NZ_CP089940.1 Protein Homology CDS 4264820 4266223 . + 0 ID=cds-WP_040465570.1;Parent=gene-LU631_RS22425;Dbxref=Genbank:WP_040465570.1;Name=WP_040465570.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440549.1;locus_tag=LU631_RS22425;product=type II secretion system protein GspE;protein_id=WP_040465570.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4266201 4267400 . + . ID=gene-LU631_RS22430;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=LU631_RS22430;old_locus_tag=LU631_22430 NZ_CP089940.1 Protein Homology CDS 4266201 4267400 . + 0 ID=cds-WP_016190980.1;Parent=gene-LU631_RS22430;Dbxref=Genbank:WP_016190980.1;Name=WP_016190980.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159674.1;locus_tag=LU631_RS22430;product=protein transport protein HofC;protein_id=WP_016190980.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4267451 4268491 . - . ID=gene-LU631_RS22435;Name=LU631_RS22435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22435;old_locus_tag=LU631_22435 NZ_CP089940.1 Protein Homology CDS 4267451 4268491 . - 0 ID=cds-WP_016190979.1;Parent=gene-LU631_RS22435;Dbxref=Genbank:WP_016190979.1;Name=WP_016190979.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015700955.1;locus_tag=LU631_RS22435;product=GMP reductase;protein_id=WP_016190979.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4268737 4269348 . + . ID=gene-LU631_RS22440;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=LU631_RS22440;old_locus_tag=LU631_22440 NZ_CP089940.1 Protein Homology CDS 4268737 4269348 . + 0 ID=cds-WP_016190978.1;Parent=gene-LU631_RS22440;Dbxref=Genbank:WP_016190978.1;Name=WP_016190978.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891611.1;locus_tag=LU631_RS22440;product=dephospho-CoA kinase;protein_id=WP_016190978.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4269353 4270096 . + . ID=gene-LU631_RS22445;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=LU631_RS22445;old_locus_tag=LU631_22445 NZ_CP089940.1 Protein Homology CDS 4269353 4270096 . + 0 ID=cds-WP_016190977.1;Parent=gene-LU631_RS22445;Dbxref=Genbank:WP_016190977.1;Name=WP_016190977.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440545.1;locus_tag=LU631_RS22445;product=cell division protein ZapD;protein_id=WP_016190977.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4270108 4270317 . + . ID=gene-LU631_RS22450;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=LU631_RS22450;old_locus_tag=LU631_22450 NZ_CP089940.1 Protein Homology CDS 4270108 4270317 . + 0 ID=cds-WP_016190976.1;Parent=gene-LU631_RS22450;Dbxref=Genbank:WP_016190976.1;Name=WP_016190976.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800456.1;locus_tag=LU631_RS22450;product=DNA gyrase inhibitor YacG;protein_id=WP_016190976.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4270345 4270740 . - . ID=gene-LU631_RS22455;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=LU631_RS22455;old_locus_tag=LU631_22455 NZ_CP089940.1 Protein Homology CDS 4270345 4270740 . - 0 ID=cds-WP_016190975.1;Parent=gene-LU631_RS22455;Dbxref=Genbank:WP_016190975.1;Name=WP_016190975.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200767.1;locus_tag=LU631_RS22455;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_016190975.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4270873 4273578 . - . ID=gene-LU631_RS22460;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=LU631_RS22460;old_locus_tag=LU631_22460 NZ_CP089940.1 Protein Homology CDS 4270873 4273578 . - 0 ID=cds-WP_016190974.1;Parent=gene-LU631_RS22460;Dbxref=Genbank:WP_016190974.1;Name=WP_016190974.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=LU631_RS22460;product=preprotein translocase subunit SecA;protein_id=WP_016190974.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4273649 4274152 . - . ID=gene-LU631_RS22465;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=LU631_RS22465;old_locus_tag=LU631_22465 NZ_CP089940.1 Protein Homology CDS 4273649 4274152 . - 0 ID=cds-WP_016190973.1;Parent=gene-LU631_RS22465;Dbxref=Genbank:WP_016190973.1;Name=WP_016190973.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170698.1;locus_tag=LU631_RS22465;product=secA translation cis-regulator SecM;protein_id=WP_016190973.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4274174 4274683 . + . ID=gene-LU631_RS22470;Name=LU631_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22470;old_locus_tag=LU631_22470 NZ_CP089940.1 Protein Homology CDS 4274174 4274683 . + 0 ID=cds-WP_016190972.1;Parent=gene-LU631_RS22470;Dbxref=Genbank:WP_016190972.1;Name=WP_016190972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170700.1;locus_tag=LU631_RS22470;product=DciA family protein;protein_id=WP_016190972.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4274663 4275595 . - . ID=gene-LU631_RS22475;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=LU631_RS22475;old_locus_tag=LU631_22475 NZ_CP089940.1 Protein Homology CDS 4274663 4275595 . - 0 ID=cds-WP_016190971.1;Parent=gene-LU631_RS22475;Dbxref=Genbank:WP_016190971.1;Name=WP_016190971.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=LU631_RS22475;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_016190971.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4275697 4276854 . - . ID=gene-LU631_RS22480;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=LU631_RS22480;old_locus_tag=LU631_22480 NZ_CP089940.1 Protein Homology CDS 4275697 4276854 . - 0 ID=cds-WP_016190970.1;Parent=gene-LU631_RS22480;Dbxref=Genbank:WP_016190970.1;Name=WP_016190970.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=LU631_RS22480;product=cell division protein FtsZ;protein_id=WP_016190970.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4276924 4278180 . - . ID=gene-LU631_RS22485;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=LU631_RS22485;old_locus_tag=LU631_22485 NZ_CP089940.1 Protein Homology CDS 4276924 4278180 . - 0 ID=cds-WP_016190969.1;Parent=gene-LU631_RS22485;Dbxref=Genbank:WP_016190969.1;Name=WP_016190969.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308125.1;locus_tag=LU631_RS22485;product=cell division protein FtsA;protein_id=WP_016190969.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4278177 4279016 . - . ID=gene-LU631_RS22490;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=LU631_RS22490;old_locus_tag=LU631_22490 NZ_CP089940.1 Protein Homology CDS 4278177 4279016 . - 0 ID=cds-WP_016190968.1;Parent=gene-LU631_RS22490;Dbxref=Genbank:WP_016190968.1;Name=WP_016190968.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542177.1;locus_tag=LU631_RS22490;product=cell division protein FtsQ;protein_id=WP_016190968.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4279018 4279938 . - . ID=gene-LU631_RS22495;Name=LU631_RS22495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22495;old_locus_tag=LU631_22495 NZ_CP089940.1 Protein Homology CDS 4279018 4279938 . - 0 ID=cds-WP_016190967.1;Parent=gene-LU631_RS22495;Dbxref=Genbank:WP_016190967.1;Name=WP_016190967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000130056.1;locus_tag=LU631_RS22495;product=D-alanine--D-alanine ligase;protein_id=WP_016190967.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4279931 4281406 . - . ID=gene-LU631_RS22500;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=LU631_RS22500;old_locus_tag=LU631_22500 NZ_CP089940.1 Protein Homology CDS 4279931 4281406 . - 0 ID=cds-WP_016190966.1;Parent=gene-LU631_RS22500;Dbxref=Genbank:WP_016190966.1;Name=WP_016190966.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159712.1;locus_tag=LU631_RS22500;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_016190966.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4281575 4282633 . - . ID=gene-LU631_RS22505;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=LU631_RS22505;old_locus_tag=LU631_22505 NZ_CP089940.1 Protein Homology CDS 4281575 4282633 . - 0 ID=cds-WP_016190965.1;Parent=gene-LU631_RS22505;Dbxref=Genbank:WP_016190965.1;Name=WP_016190965.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200756.1;locus_tag=LU631_RS22505;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_016190965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4282630 4283844 . - . ID=gene-LU631_RS22510;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=LU631_RS22510;old_locus_tag=LU631_22510 NZ_CP089940.1 Protein Homology CDS 4282630 4283844 . - 0 ID=cds-WP_016190964.1;Parent=gene-LU631_RS22510;Dbxref=Genbank:WP_016190964.1;Name=WP_016190964.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210435.1;locus_tag=LU631_RS22510;product=cell division protein FtsW;protein_id=WP_016190964.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4283844 4285160 . - . ID=gene-LU631_RS22515;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=LU631_RS22515;old_locus_tag=LU631_22515 NZ_CP089940.1 Protein Homology CDS 4283844 4285160 . - 0 ID=cds-WP_016190963.1;Parent=gene-LU631_RS22515;Dbxref=Genbank:WP_016190963.1;Name=WP_016190963.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225108.1;locus_tag=LU631_RS22515;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_016190963.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4285163 4286245 . - . ID=gene-LU631_RS22520;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=LU631_RS22520;old_locus_tag=LU631_22520 NZ_CP089940.1 Protein Homology CDS 4285163 4286245 . - 0 ID=cds-WP_016190962.1;Parent=gene-LU631_RS22520;Dbxref=Genbank:WP_016190962.1;Name=WP_016190962.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=LU631_RS22520;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_016190962.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4286239 4287600 . - . ID=gene-LU631_RS22525;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=LU631_RS22525;old_locus_tag=LU631_22525 NZ_CP089940.1 Protein Homology CDS 4286239 4287600 . - 0 ID=cds-WP_016190961.1;Parent=gene-LU631_RS22525;Dbxref=Genbank:WP_016190961.1;Name=WP_016190961.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542182.1;locus_tag=LU631_RS22525;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_016190961.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4287597 4289084 . - . ID=gene-LU631_RS22530;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=LU631_RS22530;old_locus_tag=LU631_22530 NZ_CP089940.1 Protein Homology CDS 4287597 4289084 . - 0 ID=cds-WP_016190960.1;Parent=gene-LU631_RS22530;Dbxref=Genbank:WP_016190960.1;Name=WP_016190960.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170707.1;locus_tag=LU631_RS22530;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_016190960.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4289071 4290843 . - . ID=gene-LU631_RS22535;Name=LU631_RS22535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22535;old_locus_tag=LU631_22535 NZ_CP089940.1 Protein Homology CDS 4289071 4290843 . - 0 ID=cds-WP_016190959.1;Parent=gene-LU631_RS22535;Dbxref=Genbank:WP_016190959.1;Name=WP_016190959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024607.1;locus_tag=LU631_RS22535;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_016190959.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4290852 4291172 . - . ID=gene-LU631_RS22540;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=LU631_RS22540;old_locus_tag=LU631_22540 NZ_CP089940.1 Protein Homology CDS 4290852 4291172 . - 0 ID=cds-WP_016190958.1;Parent=gene-LU631_RS22540;Dbxref=Genbank:WP_016190958.1;Name=WP_016190958.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190958.1;locus_tag=LU631_RS22540;product=cell division protein FtsL;protein_id=WP_016190958.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4291169 4292110 . - . ID=gene-LU631_RS22545;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=LU631_RS22545;old_locus_tag=LU631_22545 NZ_CP089940.1 Protein Homology CDS 4291169 4292110 . - 0 ID=cds-WP_016190957.1;Parent=gene-LU631_RS22545;Dbxref=Genbank:WP_016190957.1;Name=WP_016190957.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459125.1;locus_tag=LU631_RS22545;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_016190957.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4292113 4292571 . - . ID=gene-LU631_RS22550;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=LU631_RS22550;old_locus_tag=LU631_22550 NZ_CP089940.1 Protein Homology CDS 4292113 4292571 . - 0 ID=cds-WP_016190956.1;Parent=gene-LU631_RS22550;Dbxref=Genbank:WP_016190956.1;Name=WP_016190956.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167064.1;locus_tag=LU631_RS22550;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_016190956.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4293109 4294119 . - . ID=gene-LU631_RS22555;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=LU631_RS22555;old_locus_tag=LU631_22555 NZ_CP089940.1 Protein Homology CDS 4293109 4294119 . - 0 ID=cds-WP_016190955.1;Parent=gene-LU631_RS22555;Dbxref=Genbank:WP_016190955.1;Name=WP_016190955.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200746.1;locus_tag=LU631_RS22555;product=catabolite repressor/activator;protein_id=WP_016190955.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4294366 4294776 . - . ID=gene-LU631_RS22560;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS22560;old_locus_tag=LU631_22560 NZ_CP089940.1 Protein Homology CDS 4294366 4294776 . - 0 ID=cds-WP_046372068.1;Parent=gene-LU631_RS22560;Dbxref=Genbank:WP_046372068.1;Name=WP_046372068.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU631_RS22560;product=IS200/IS605 family transposase;protein_id=WP_046372068.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4294950 4295441 . - . ID=gene-LU631_RS22565;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=LU631_RS22565;old_locus_tag=LU631_22565 NZ_CP089940.1 Protein Homology CDS 4294950 4295441 . - 0 ID=cds-WP_016190954.1;Parent=gene-LU631_RS22565;Dbxref=Genbank:WP_016190954.1;Name=WP_016190954.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=LU631_RS22565;product=acetolactate synthase small subunit;protein_id=WP_016190954.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4295444 4297168 . - . ID=gene-LU631_RS22570;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=LU631_RS22570;old_locus_tag=LU631_22570 NZ_CP089940.1 Protein Homology CDS 4295444 4297168 . - 0 ID=cds-WP_016190953.1;Parent=gene-LU631_RS22570;Dbxref=Genbank:WP_016190953.1;Name=WP_016190953.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025294.2;locus_tag=LU631_RS22570;product=acetolactate synthase 3 large subunit;protein_id=WP_016190953.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4298066 4299634 . + . ID=gene-LU631_RS22575;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=LU631_RS22575;old_locus_tag=LU631_22575 NZ_CP089940.1 Protein Homology CDS 4298066 4299634 . + 0 ID=cds-WP_016190952.1;Parent=gene-LU631_RS22575;Dbxref=Genbank:WP_016190952.1;Name=WP_016190952.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=LU631_RS22575;product=2-isopropylmalate synthase;protein_id=WP_016190952.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4299637 4300725 . + . ID=gene-LU631_RS22580;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=LU631_RS22580;old_locus_tag=LU631_22580 NZ_CP089940.1 Protein Homology CDS 4299637 4300725 . + 0 ID=cds-WP_016190951.1;Parent=gene-LU631_RS22580;Dbxref=Genbank:WP_016190951.1;Name=WP_016190951.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159730.1;locus_tag=LU631_RS22580;product=3-isopropylmalate dehydrogenase;protein_id=WP_016190951.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4300728 4302137 . + . ID=gene-LU631_RS22585;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=LU631_RS22585;old_locus_tag=LU631_22585 NZ_CP089940.1 Protein Homology CDS 4300728 4302137 . + 0 ID=cds-WP_016190950.1;Parent=gene-LU631_RS22585;Dbxref=Genbank:WP_016190950.1;Name=WP_016190950.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388979.1;locus_tag=LU631_RS22585;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_016190950.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4302147 4302752 . + . ID=gene-LU631_RS22590;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=LU631_RS22590;old_locus_tag=LU631_22590 NZ_CP089940.1 Protein Homology CDS 4302147 4302752 . + 0 ID=cds-WP_016190949.1;Parent=gene-LU631_RS22590;Dbxref=Genbank:WP_016190949.1;Name=WP_016190949.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440487.1;locus_tag=LU631_RS22590;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_016190949.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4302797 4302967 . - . ID=gene-LU631_RS22595;Name=LU631_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22595;old_locus_tag=LU631_22595 NZ_CP089940.1 GeneMarkS-2+ CDS 4302797 4302967 . - 0 ID=cds-WP_157275227.1;Parent=gene-LU631_RS22595;Dbxref=Genbank:WP_157275227.1;Name=WP_157275227.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS22595;product=hypothetical protein;protein_id=WP_157275227.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4303290 4303649 . - . ID=gene-LU631_RS22600;Name=LU631_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22600;old_locus_tag=LU631_22600 NZ_CP089940.1 GeneMarkS-2+ CDS 4303290 4303649 . - 0 ID=cds-WP_016190947.1;Parent=gene-LU631_RS22600;Dbxref=Genbank:WP_016190947.1;Name=WP_016190947.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS22600;product=drug resistance transporter;protein_id=WP_016190947.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4303802 4303972 . - . ID=gene-LU631_RS22605;Name=LU631_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22605;old_locus_tag=LU631_22605 NZ_CP089940.1 GeneMarkS-2+ CDS 4303802 4303972 . - 0 ID=cds-WP_016190946.1;Parent=gene-LU631_RS22605;Dbxref=Genbank:WP_016190946.1;Name=WP_016190946.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS22605;product=hypothetical protein;protein_id=WP_016190946.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4304100 4305266 . - . ID=gene-LU631_RS22610;Name=LU631_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22610;old_locus_tag=LU631_22610 NZ_CP089940.1 Protein Homology CDS 4304100 4305266 . - 0 ID=cds-WP_016190945.1;Parent=gene-LU631_RS22610;Dbxref=Genbank:WP_016190945.1;Name=WP_016190945.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000637847.1;locus_tag=LU631_RS22610;product=MFS transporter;protein_id=WP_016190945.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4305528 4307189 . + . ID=gene-LU631_RS22615;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=LU631_RS22615;old_locus_tag=LU631_22615 NZ_CP089940.1 Protein Homology CDS 4305528 4307189 . + 0 ID=cds-WP_016190944.1;Parent=gene-LU631_RS22615;Dbxref=Genbank:WP_016190944.1;Name=WP_016190944.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138624.1;locus_tag=LU631_RS22615;product=HTH-type transcriptional regulator SgrR;protein_id=WP_016190944.1;transl_table=11 NZ_CP089940.1 cmsearch riboswitch 4307226 4307324 . + . ID=id-NZ_CP089940.1:4307226..4307324;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP089940.1 RefSeq gene 4307364 4308350 . + . ID=gene-LU631_RS22620;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=LU631_RS22620;old_locus_tag=LU631_22620 NZ_CP089940.1 Protein Homology CDS 4307364 4308350 . + 0 ID=cds-WP_016190943.1;Parent=gene-LU631_RS22620;Dbxref=Genbank:WP_016190943.1;Name=WP_016190943.1;Ontology_term=GO:0015888,GO:0030974,GO:0030975,GO:0030976,GO:0048502,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,thiamine pyrophosphate binding|0030976||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA,thiamine pyrophosphate transmembrane transport|0030974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542195.1;locus_tag=LU631_RS22620;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_016190943.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4308326 4309936 . + . ID=gene-LU631_RS22625;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=LU631_RS22625;old_locus_tag=LU631_22625 NZ_CP089940.1 Protein Homology CDS 4308326 4309936 . + 0 ID=cds-WP_016190942.1;Parent=gene-LU631_RS22625;Dbxref=Genbank:WP_016190942.1;Name=WP_016190942.1;Ontology_term=GO:0015888,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=thiP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=thiamine transport|0015888||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000235706.1;locus_tag=LU631_RS22625;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_016190942.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4309920 4310621 . + . ID=gene-LU631_RS22630;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=LU631_RS22630;old_locus_tag=LU631_22630 NZ_CP089940.1 Protein Homology CDS 4309920 4310621 . + 0 ID=cds-WP_016190941.1;Parent=gene-LU631_RS22630;Dbxref=Genbank:WP_016190941.1;Name=WP_016190941.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800488.1;locus_tag=LU631_RS22630;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_016190941.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4310854 4311621 . - . ID=gene-LU631_RS22635;Name=LU631_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22635;old_locus_tag=LU631_22635 NZ_CP089940.1 Protein Homology CDS 4310854 4311621 . - 0 ID=cds-WP_016190940.1;Parent=gene-LU631_RS22635;Dbxref=Genbank:WP_016190940.1;Name=WP_016190940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200735.1;locus_tag=LU631_RS22635;product=DedA family protein;protein_id=WP_016190940.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4311780 4312204 . + . ID=gene-LU631_RS22640;Name=LU631_RS22640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22640;old_locus_tag=LU631_22640;partial=true;pseudo=true;start_range=.,4311780 NZ_CP089940.1 Protein Homology CDS 4311780 4312204 . + 0 ID=cds-LU631_RS22640;Parent=gene-LU631_RS22640;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343760.1;locus_tag=LU631_RS22640;partial=true;product=transposase;pseudo=true;start_range=.,4311780;transl_table=11 NZ_CP089940.1 RefSeq gene 4312282 4314642 . + . ID=gene-LU631_RS22645;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=LU631_RS22645;old_locus_tag=LU631_22645 NZ_CP089940.1 Protein Homology CDS 4312282 4314642 . + 0 ID=cds-WP_016190937.1;Parent=gene-LU631_RS22645;Dbxref=Genbank:WP_016190937.1;Name=WP_016190937.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159744.1;locus_tag=LU631_RS22645;product=DNA polymerase II;protein_id=WP_016190937.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4314900 4317806 . + . ID=gene-LU631_RS22650;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=LU631_RS22650;old_locus_tag=LU631_22650 NZ_CP089940.1 Protein Homology CDS 4314900 4317806 . + 0 ID=cds-WP_016190936.1;Parent=gene-LU631_RS22650;Dbxref=Genbank:WP_016190936.1;Name=WP_016190936.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=LU631_RS22650;product=RNA polymerase-associated protein RapA;protein_id=WP_016190936.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4317846 4318499 . + . ID=gene-LU631_RS22655;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=LU631_RS22655;old_locus_tag=LU631_22655 NZ_CP089940.1 Protein Homology CDS 4317846 4318499 . + 0 ID=cds-WP_016190935.1;Parent=gene-LU631_RS22655;Dbxref=Genbank:WP_016190935.1;Name=WP_016190935.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010253813.1;locus_tag=LU631_RS22655;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_016190935.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4318797 4319232 . - . ID=gene-LU631_RS22660;Name=LU631_RS22660;end_range=4319232,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22660;old_locus_tag=LU631_22660;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4318797 4319232 . - 0 ID=cds-LU631_RS22660;Parent=gene-LU631_RS22660;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4319232,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001067855.1;locus_tag=LU631_RS22660;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4319474 4320007 . + . ID=gene-LU631_RS22665;Name=LU631_RS22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22665;old_locus_tag=LU631_22665 NZ_CP089940.1 Protein Homology CDS 4319474 4320007 . + 0 ID=cds-WP_016190933.1;Parent=gene-LU631_RS22665;Dbxref=Genbank:WP_016190933.1;Name=WP_016190933.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS22665;product=transposase;protein_id=WP_016190933.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4320492 4321706 . + . ID=gene-LU631_RS22670;Name=LU631_RS22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22670;old_locus_tag=LU631_22670 NZ_CP089940.1 GeneMarkS-2+ CDS 4320492 4321706 . + 0 ID=cds-WP_198292524.1;Parent=gene-LU631_RS22670;Dbxref=Genbank:WP_198292524.1;Name=WP_198292524.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS22670;product=hypothetical protein;protein_id=WP_198292524.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4321749 4322111 . + . ID=gene-LU631_RS22675;Name=LU631_RS22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22675;old_locus_tag=LU631_22675 NZ_CP089940.1 GeneMarkS-2+ CDS 4321749 4322111 . + 0 ID=cds-WP_198292523.1;Parent=gene-LU631_RS22675;Dbxref=Genbank:WP_198292523.1;Name=WP_198292523.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS22675;product=hypothetical protein;protein_id=WP_198292523.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4322217 4322444 . - . ID=gene-LU631_RS22680;Name=LU631_RS22680;end_range=4322444,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22680;old_locus_tag=LU631_22680;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4322217 4322444 . - 0 ID=cds-LU631_RS22680;Parent=gene-LU631_RS22680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4322444,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU631_RS22680;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4322507 4322653 . + . ID=gene-LU631_RS22685;Name=LU631_RS22685;end_range=4322653,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22685;old_locus_tag=LU631_22685;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4322507 4322653 . + 0 ID=cds-LU631_RS22685;Parent=gene-LU631_RS22685;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4322653,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012472779.1;locus_tag=LU631_RS22685;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4322625 4323450 . - . ID=gene-LU631_RS22690;Name=LU631_RS22690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22690;old_locus_tag=LU631_22690;pseudo=true NZ_CP089940.1 Protein Homology CDS 4322625 4323450 . - 0 ID=cds-LU631_RS22690;Parent=gene-LU631_RS22690;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS22690;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4324242 4325486 . + . ID=gene-LU631_RS22695;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=LU631_RS22695;old_locus_tag=LU631_22695 NZ_CP089940.1 Protein Homology CDS 4324242 4325486 . + 0 ID=cds-WP_016190930.1;Parent=gene-LU631_RS22695;Dbxref=Genbank:WP_016190930.1;Name=WP_016190930.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456328.1;locus_tag=LU631_RS22695;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_016190930.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4326149 4326970 . + . ID=gene-LU631_RS22700;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=LU631_RS22700;old_locus_tag=LU631_22700 NZ_CP089940.1 Protein Homology CDS 4326149 4326970 . + 0 ID=cds-WP_016190929.1;Parent=gene-LU631_RS22700;Dbxref=Genbank:WP_016190929.1;Name=WP_016190929.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159760.1;locus_tag=LU631_RS22700;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_016190929.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4327417 4328562 . + . ID=gene-LU631_RS22705;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=LU631_RS22705;old_locus_tag=LU631_22705 NZ_CP089940.1 Protein Homology CDS 4327417 4328562 . + 0 ID=cds-WP_016190927.1;Parent=gene-LU631_RS22705;Dbxref=Genbank:WP_016190927.1;Name=WP_016190927.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=LU631_RS22705;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_016190927.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4328577 4331801 . + . ID=gene-LU631_RS22710;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=LU631_RS22710;old_locus_tag=LU631_22710 NZ_CP089940.1 Protein Homology CDS 4328577 4331801 . + 0 ID=cds-WP_016190926.1;Parent=gene-LU631_RS22710;Dbxref=Genbank:WP_016190926.1;Name=WP_016190926.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019843352.1;locus_tag=LU631_RS22710;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_016190926.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4332373 4332852 . + . ID=gene-LU631_RS22715;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=LU631_RS22715;old_locus_tag=LU631_22715 NZ_CP089940.1 Protein Homology CDS 4332373 4332852 . + 0 ID=cds-WP_016190925.1;Parent=gene-LU631_RS22715;Dbxref=Genbank:WP_016190925.1;Name=WP_016190925.1;Ontology_term=GO:0046654;gbkey=CDS;gene=folA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667064.1;locus_tag=LU631_RS22715;product=type 3 dihydrofolate reductase;protein_id=WP_016190925.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4333222 4334052 . - . ID=gene-LU631_RS22720;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=LU631_RS22720;old_locus_tag=LU631_22720 NZ_CP089940.1 Protein Homology CDS 4333222 4334052 . - 0 ID=cds-WP_016190924.1;Parent=gene-LU631_RS22720;Dbxref=Genbank:WP_016190924.1;Name=WP_016190924.1;Ontology_term=GO:0006139,GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200725.1;locus_tag=LU631_RS22720;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_016190924.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4334097 4334474 . - . ID=gene-LU631_RS22725;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=LU631_RS22725;old_locus_tag=LU631_22725 NZ_CP089940.1 Protein Homology CDS 4334097 4334474 . - 0 ID=cds-WP_016190923.1;Parent=gene-LU631_RS22725;Dbxref=Genbank:WP_016190923.1;Name=WP_016190923.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225059.1;locus_tag=LU631_RS22725;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_016190923.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4334476 4335306 . - . ID=gene-LU631_RS22730;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=LU631_RS22730;old_locus_tag=LU631_22730 NZ_CP089940.1 Protein Homology CDS 4334476 4335306 . - 0 ID=cds-WP_016190922.1;Parent=gene-LU631_RS22730;Dbxref=Genbank:WP_016190922.1;Name=WP_016190922.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440472.1;locus_tag=LU631_RS22730;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_016190922.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4335306 4336289 . - . ID=gene-LU631_RS22735;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=LU631_RS22735;old_locus_tag=LU631_22735 NZ_CP089940.1 Protein Homology CDS 4335306 4336289 . - 0 ID=cds-WP_016190921.1;Parent=gene-LU631_RS22735;Dbxref=Genbank:WP_016190921.1;Name=WP_016190921.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016940633.1;locus_tag=LU631_RS22735;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_016190921.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4336279 4337574 . - . ID=gene-LU631_RS22740;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=LU631_RS22740;old_locus_tag=LU631_22740 NZ_CP089940.1 Protein Homology CDS 4336279 4337574 . - 0 ID=cds-WP_016190920.1;Parent=gene-LU631_RS22740;Dbxref=Genbank:WP_016190920.1;Name=WP_016190920.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667069.1;locus_tag=LU631_RS22740;product=peptidylprolyl isomerase SurA;protein_id=WP_016190920.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4337629 4340031 . - . ID=gene-LU631_RS22745;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=LU631_RS22745;old_locus_tag=LU631_22745 NZ_CP089940.1 Protein Homology CDS 4337629 4340031 . - 0 ID=cds-WP_040465541.1;Parent=gene-LU631_RS22745;Dbxref=Genbank:WP_040465541.1;Name=WP_040465541.1;Ontology_term=GO:0010033,GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=response to organic substance|0010033||IEA,lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542203.1;locus_tag=LU631_RS22745;product=LPS assembly protein LptD;protein_id=WP_040465541.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4340306 4341127 . + . ID=gene-LU631_RS22750;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=LU631_RS22750;old_locus_tag=LU631_22750 NZ_CP089940.1 Protein Homology CDS 4340306 4341127 . + 0 ID=cds-WP_016190918.1;Parent=gene-LU631_RS22750;Dbxref=Genbank:WP_016190918.1;Name=WP_016190918.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159747.1;locus_tag=LU631_RS22750;product=co-chaperone DjlA;protein_id=WP_016190918.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4341307 4341769 . - . ID=gene-LU631_RS22755;Name=LU631_RS22755;end_range=4341769,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22755;old_locus_tag=LU631_22755;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4341307 4341769 . - 0 ID=cds-LU631_RS22755;Parent=gene-LU631_RS22755;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=4341769,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU631_RS22755;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4341830 4342661 . + . ID=gene-LU631_RS22760;Name=LU631_RS22760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22760;old_locus_tag=LU631_22760;pseudo=true NZ_CP089940.1 Protein Homology CDS 4341830 4342661 . + 0 ID=cds-LU631_RS22760;Parent=gene-LU631_RS22760;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917256.1;locus_tag=LU631_RS22760;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4342742 4343695 . - . ID=gene-LU631_RS22765;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=LU631_RS22765;old_locus_tag=LU631_22765 NZ_CP089940.1 Protein Homology CDS 4342742 4343695 . - 0 ID=cds-WP_016190915.1;Parent=gene-LU631_RS22765;Dbxref=Genbank:WP_016190915.1;Name=WP_016190915.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010253724.1;locus_tag=LU631_RS22765;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_016190915.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4343676 4344146 . - . ID=gene-LU631_RS22770;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=LU631_RS22770;old_locus_tag=LU631_22770 NZ_CP089940.1 Protein Homology CDS 4343676 4344146 . - 0 ID=cds-WP_016190914.1;Parent=gene-LU631_RS22770;Dbxref=Genbank:WP_016190914.1;Name=WP_016190914.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170742.1;locus_tag=LU631_RS22770;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_016190914.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4344156 4344650 . - . ID=gene-LU631_RS22775;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=LU631_RS22775;old_locus_tag=LU631_22775 NZ_CP089940.1 Protein Homology CDS 4344156 4344650 . - 0 ID=cds-WP_016190913.1;Parent=gene-LU631_RS22775;Dbxref=Genbank:WP_016190913.1;Name=WP_016190913.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542214.1;locus_tag=LU631_RS22775;product=signal peptidase II;protein_id=WP_016190913.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4344651 4347467 . - . ID=gene-LU631_RS22780;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=LU631_RS22780;old_locus_tag=LU631_22780 NZ_CP089940.1 Protein Homology CDS 4344651 4347467 . - 0 ID=cds-WP_016190912.1;Parent=gene-LU631_RS22780;Dbxref=Genbank:WP_016190912.1;Name=WP_016190912.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=LU631_RS22780;product=isoleucine--tRNA ligase;protein_id=WP_016190912.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4347498 4348436 . - . ID=gene-LU631_RS22785;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=LU631_RS22785;old_locus_tag=LU631_22785 NZ_CP089940.1 Protein Homology CDS 4347498 4348436 . - 0 ID=cds-WP_016190911.1;Parent=gene-LU631_RS22785;Dbxref=Genbank:WP_016190911.1;Name=WP_016190911.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159767.1;locus_tag=LU631_RS22785;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_016190911.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4348751 4349014 . + . ID=gene-LU631_RS22790;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=LU631_RS22790;old_locus_tag=LU631_22790 NZ_CP089940.1 Protein Homology CDS 4348751 4349014 . + 0 ID=cds-WP_016190910.1;Parent=gene-LU631_RS22790;Dbxref=Genbank:WP_016190910.1;Name=WP_016190910.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=LU631_RS22790;product=30S ribosomal protein S20;protein_id=WP_016190910.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4349281 4350441 . - . ID=gene-LU631_RS22795;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=LU631_RS22795;old_locus_tag=LU631_22795 NZ_CP089940.1 Protein Homology CDS 4349281 4350441 . - 0 ID=cds-WP_016190909.1;Parent=gene-LU631_RS22795;Dbxref=Genbank:WP_016190909.1;Name=WP_016190909.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159770.1;locus_tag=LU631_RS22795;product=Na+/H+ antiporter NhaA;protein_id=WP_016190909.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4350918 4352051 . - . ID=gene-LU631_RS22800;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=LU631_RS22800;old_locus_tag=LU631_22800 NZ_CP089940.1 Protein Homology CDS 4350918 4352051 . - 0 ID=cds-WP_016190908.1;Parent=gene-LU631_RS22800;Dbxref=Genbank:WP_016190908.1;Name=WP_016190908.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308042.1;locus_tag=LU631_RS22800;product=molecular chaperone DnaJ;protein_id=WP_016190908.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4352158 4354071 . - . ID=gene-LU631_RS22805;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=LU631_RS22805;old_locus_tag=LU631_22805 NZ_CP089940.1 Protein Homology CDS 4352158 4354071 . - 0 ID=cds-WP_016190907.1;Parent=gene-LU631_RS22805;Dbxref=Genbank:WP_016190907.1;Name=WP_016190907.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667051.1;locus_tag=LU631_RS22805;product=molecular chaperone DnaK;protein_id=WP_016190907.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4354374 4354943 . + . ID=gene-LU631_RS22810;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=LU631_RS22810;old_locus_tag=LU631_22810 NZ_CP089940.1 Protein Homology CDS 4354374 4354943 . + 0 ID=cds-WP_016190906.1;Parent=gene-LU631_RS22810;Dbxref=Genbank:WP_016190906.1;Name=WP_016190906.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004721110.1;locus_tag=LU631_RS22810;product=acetate uptake transporter;protein_id=WP_016190906.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4355352 4356049 . - . ID=gene-LU631_RS22815;Name=LU631_RS22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22815;old_locus_tag=LU631_22815 NZ_CP089940.1 Protein Homology CDS 4355800 4356049 . - 0 ID=cds-WP_152664208.1;Parent=gene-LU631_RS22815;Dbxref=Genbank:WP_152664208.1;Name=WP_152664208.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS22815;product=IS1 family transposase;protein_id=WP_152664208.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 4355352 4355800 . - 2 ID=cds-WP_152664208.1;Parent=gene-LU631_RS22815;Dbxref=Genbank:WP_152664208.1;Name=WP_152664208.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS22815;product=IS1 family transposase;protein_id=WP_152664208.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4356129 4357448 . - . ID=gene-LU631_RS22820;Name=LU631_RS22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22820;old_locus_tag=LU631_22820 NZ_CP089940.1 Protein Homology CDS 4356129 4357448 . - 0 ID=cds-WP_040465569.1;Parent=gene-LU631_RS22820;Dbxref=Genbank:WP_040465569.1;Name=WP_040465569.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204230.1;locus_tag=LU631_RS22820;product=MFS transporter;protein_id=WP_040465569.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4357673 4358257 . - . ID=gene-LU631_RS22825;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=LU631_RS22825;old_locus_tag=LU631_22825 NZ_CP089940.1 Protein Homology CDS 4357673 4358257 . - 0 ID=cds-WP_016190902.1;Parent=gene-LU631_RS22825;Dbxref=Genbank:WP_016190902.1;Name=WP_016190902.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159779.1;locus_tag=LU631_RS22825;product=molybdopterin adenylyltransferase;protein_id=WP_016190902.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4358369 4359322 . - . ID=gene-LU631_RS22830;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=LU631_RS22830;old_locus_tag=LU631_22830 NZ_CP089940.1 Protein Homology CDS 4358369 4359322 . - 0 ID=cds-WP_016190901.1;Parent=gene-LU631_RS22830;Dbxref=Genbank:WP_016190901.1;Name=WP_016190901.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308035.1;locus_tag=LU631_RS22830;product=transaldolase;protein_id=WP_016190901.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4359561 4360337 . + . ID=gene-LU631_RS22835;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=LU631_RS22835;old_locus_tag=LU631_22835 NZ_CP089940.1 Protein Homology CDS 4359561 4360337 . + 0 ID=cds-WP_016190900.1;Parent=gene-LU631_RS22835;Dbxref=Genbank:WP_016190900.1;Name=WP_016190900.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008108674.1;locus_tag=LU631_RS22835;product=peroxide stress protein YaaA;protein_id=WP_016190900.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4360375 4361661 . - . ID=gene-LU631_RS22840;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=LU631_RS22840;old_locus_tag=LU631_22840 NZ_CP089940.1 Protein Homology CDS 4360375 4361661 . - 0 ID=cds-WP_016190899.1;Parent=gene-LU631_RS22840;Dbxref=Genbank:WP_016190899.1;Name=WP_016190899.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667045.1;locus_tag=LU631_RS22840;product=threonine synthase;protein_id=WP_016190899.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4361665 4362594 . - . ID=gene-LU631_RS22845;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=LU631_RS22845;old_locus_tag=LU631_22845 NZ_CP089940.1 Protein Homology CDS 4361665 4362594 . - 0 ID=cds-WP_016190898.1;Parent=gene-LU631_RS22845;Dbxref=Genbank:WP_016190898.1;Name=WP_016190898.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159786.1;locus_tag=LU631_RS22845;product=homoserine kinase;protein_id=WP_016190898.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4362597 4365059 . - . ID=gene-LU631_RS22850;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=LU631_RS22850;old_locus_tag=LU631_22850 NZ_CP089940.1 Protein Homology CDS 4362597 4365059 . - 0 ID=cds-WP_016190897.1;Parent=gene-LU631_RS22850;Dbxref=Genbank:WP_016190897.1;Name=WP_016190897.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=LU631_RS22850;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_016190897.1;transl_table=11 NZ_CP089940.1 cmsearch sequence_feature 4365084 4365202 . - . ID=id-NZ_CP089940.1:4365084..4365202;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP089940.1 RefSeq gene 4366320 4367036 . + . ID=gene-LU631_RS22855;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=LU631_RS22855;old_locus_tag=LU631_22855 NZ_CP089940.1 Protein Homology CDS 4366320 4367036 . + 0 ID=cds-WP_016190896.1;Parent=gene-LU631_RS22855;Dbxref=Genbank:WP_016190896.1;Name=WP_016190896.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225009.1;locus_tag=LU631_RS22855;product=two-component system response regulator ArcA;protein_id=WP_016190896.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4367085 4367559 . - . ID=gene-LU631_RS22860;Name=creA;gbkey=Gene;gene=creA;gene_biotype=pseudogene;locus_tag=LU631_RS22860;old_locus_tag=LU631_22860;pseudo=true NZ_CP089940.1 Protein Homology CDS 4367085 4367559 . - 0 ID=cds-LU631_RS22860;Parent=gene-LU631_RS22860;Note=frameshifted;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159792.1;locus_tag=LU631_RS22860;product=protein CreA;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4367750 4368640 . + . ID=gene-LU631_RS22865;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=LU631_RS22865;old_locus_tag=LU631_22865 NZ_CP089940.1 Protein Homology CDS 4367750 4368640 . + 0 ID=cds-WP_016190893.1;Parent=gene-LU631_RS22865;Dbxref=Genbank:WP_016190893.1;Name=WP_016190893.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200692.1;locus_tag=LU631_RS22865;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_016190893.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4368710 4369357 . - . ID=gene-LU631_RS22870;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=LU631_RS22870;old_locus_tag=LU631_22870 NZ_CP089940.1 Protein Homology CDS 4368710 4369357 . - 0 ID=cds-WP_016190892.1;Parent=gene-LU631_RS22870;Dbxref=Genbank:WP_016190892.1;Name=WP_016190892.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016534799.1;locus_tag=LU631_RS22870;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_016190892.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4369409 4369941 . + . ID=gene-LU631_RS22875;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=pseudogene;locus_tag=LU631_RS22875;old_locus_tag=LU631_22875;pseudo=true NZ_CP089940.1 Protein Homology CDS 4369409 4369941 . + 0 ID=cds-LU631_RS22875;Parent=gene-LU631_RS22875;Note=frameshifted;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800562.1;locus_tag=LU631_RS22875;product=inosine/xanthosine triphosphatase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4369927 4370256 . - . ID=gene-LU631_RS22880;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=LU631_RS22880;old_locus_tag=LU631_22880 NZ_CP089940.1 Protein Homology CDS 4369927 4370256 . - 0 ID=cds-WP_016190891.1;Parent=gene-LU631_RS22880;Dbxref=Genbank:WP_016190891.1;Name=WP_016190891.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800563.1;locus_tag=LU631_RS22880;product=trp operon repressor;protein_id=WP_016190891.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4370310 4372235 . - . ID=gene-LU631_RS22885;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=LU631_RS22885;old_locus_tag=LU631_22885 NZ_CP089940.1 Protein Homology CDS 4370310 4372235 . - 0 ID=cds-WP_016190890.1;Parent=gene-LU631_RS22885;Dbxref=Genbank:WP_016190890.1;Name=WP_016190890.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170759.1;locus_tag=LU631_RS22885;product=murein transglycosylase;protein_id=WP_016190890.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4372697 4373234 . + . ID=gene-LU631_RS22890;Name=LU631_RS22890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22890;old_locus_tag=LU631_22890;partial=true;pseudo=true;start_range=.,4372697 NZ_CP089940.1 Protein Homology CDS 4372697 4373234 . + 0 ID=cds-LU631_RS22890;Parent=gene-LU631_RS22890;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225692.1;locus_tag=LU631_RS22890;partial=true;product=cation transporting ATPase C-terminal domain-containing protein;pseudo=true;start_range=.,4372697;transl_table=11 NZ_CP089940.1 RefSeq gene 4373879 4375546 . + . ID=gene-LU631_RS22895;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=LU631_RS22895;old_locus_tag=LU631_22895 NZ_CP089940.1 Protein Homology CDS 4373879 4375546 . + 0 ID=cds-WP_016190886.1;Parent=gene-LU631_RS22895;Dbxref=Genbank:WP_016190886.1;Name=WP_016190886.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313376.1;locus_tag=LU631_RS22895;product=energy-dependent translational throttle protein EttA;protein_id=WP_016190886.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4375864 4376265 . + . ID=gene-LU631_RS22900;Name=LU631_RS22900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22900;old_locus_tag=LU631_22900;partial=true;pseudo=true;start_range=.,4375864 NZ_CP089940.1 Protein Homology CDS 4375864 4376265 . + 0 ID=cds-LU631_RS22900;Parent=gene-LU631_RS22900;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440425.1;locus_tag=LU631_RS22900;partial=true;product=zinc-binding dehydrogenase;pseudo=true;start_range=.,4375864;transl_table=11 NZ_CP089940.1 RefSeq gene 4376289 4377515 . - . ID=gene-LU631_RS22905;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=LU631_RS22905;old_locus_tag=LU631_22905 NZ_CP089940.1 Protein Homology CDS 4376289 4377515 . - 0 ID=cds-WP_016190884.1;Parent=gene-LU631_RS22905;Dbxref=Genbank:WP_016190884.1;Name=WP_016190884.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542243.1;locus_tag=LU631_RS22905;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_016190884.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4377621 4379003 . - . ID=gene-LU631_RS22910;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=LU631_RS22910;old_locus_tag=LU631_22910 NZ_CP089940.1 Protein Homology CDS 4377621 4379003 . - 0 ID=cds-WP_016190883.1;Parent=gene-LU631_RS22910;Dbxref=Genbank:WP_016190883.1;Name=WP_016190883.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=LU631_RS22910;product=DNA repair protein RadA;protein_id=WP_016190883.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4379018 4379995 . - . ID=gene-LU631_RS22915;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=LU631_RS22915;old_locus_tag=LU631_22915 NZ_CP089940.1 Protein Homology CDS 4379018 4379995 . - 0 ID=cds-WP_016190882.1;Parent=gene-LU631_RS22915;Dbxref=Genbank:WP_016190882.1;Name=WP_016190882.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008925531.1;locus_tag=LU631_RS22915;product=phosphoserine phosphatase;protein_id=WP_016190882.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4380119 4380781 . + . ID=gene-LU631_RS22920;Name=LU631_RS22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22920;old_locus_tag=LU631_22920 NZ_CP089940.1 Protein Homology CDS 4380119 4380781 . + 0 ID=cds-WP_016190881.1;Parent=gene-LU631_RS22920;Dbxref=Genbank:WP_016190881.1;Name=WP_016190881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170773.1;locus_tag=LU631_RS22920;product=YtjB family periplasmic protein;protein_id=WP_016190881.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4381301 4381999 . - . ID=gene-LU631_RS22925;Name=LU631_RS22925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22925;old_locus_tag=LU631_22925;pseudo=true NZ_CP089940.1 Protein Homology CDS 4381301 4381999 . - 0 ID=cds-LU631_RS22925;Parent=gene-LU631_RS22925;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=LU631_RS22925;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4382187 4382906 . - . ID=gene-LU631_RS22930;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=LU631_RS22930;old_locus_tag=LU631_22930 NZ_CP089940.1 Protein Homology CDS 4382187 4382906 . - 0 ID=cds-WP_016190879.1;Parent=gene-LU631_RS22930;Dbxref=Genbank:WP_016190879.1;Name=WP_016190879.1;Ontology_term=GO:0043096,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=purine nucleobase salvage|0043096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209217.1;locus_tag=LU631_RS22930;product=purine-nucleoside phosphorylase;protein_id=WP_016190879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4382946 4384169 . - . ID=gene-LU631_RS22935;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=LU631_RS22935;old_locus_tag=LU631_22935 NZ_CP089940.1 Protein Homology CDS 4382946 4384169 . - 0 ID=cds-WP_016190878.1;Parent=gene-LU631_RS22935;Dbxref=Genbank:WP_016190878.1;Name=WP_016190878.1;Ontology_term=GO:0006139,GO:0008973;gbkey=CDS;gene=deoB;go_function=phosphopentomutase activity|0008973||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014605068.1;locus_tag=LU631_RS22935;product=phosphopentomutase;protein_id=WP_016190878.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4384249 4385090 . - . ID=gene-LU631_RS22940;Name=LU631_RS22940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22940;old_locus_tag=LU631_22940;partial=true;pseudo=true;start_range=.,4384249 NZ_CP089940.1 Protein Homology CDS 4384249 4385090 . - 0 ID=cds-LU631_RS22940;Parent=gene-LU631_RS22940;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454991.1;locus_tag=LU631_RS22940;partial=true;product=thymidine phosphorylase;pseudo=true;start_range=.,4384249;transl_table=11 NZ_CP089940.1 RefSeq gene 4385106 4385885 . - . ID=gene-LU631_RS22945;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=LU631_RS22945;old_locus_tag=LU631_22945 NZ_CP089940.1 Protein Homology CDS 4385106 4385885 . - 0 ID=cds-WP_016190875.1;Parent=gene-LU631_RS22945;Dbxref=Genbank:WP_016190875.1;Name=WP_016190875.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170779.1;locus_tag=LU631_RS22945;product=deoxyribose-phosphate aldolase;protein_id=WP_016190875.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4386160 4386936 . - . ID=gene-LU631_RS22950;Name=LU631_RS22950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22950;old_locus_tag=LU631_22950 NZ_CP089940.1 Protein Homology CDS 4386160 4386936 . - 0 ID=cds-WP_016190874.1;Parent=gene-LU631_RS22950;Dbxref=Genbank:WP_016190874.1;Name=WP_016190874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667018.1;locus_tag=LU631_RS22950;product=metal-dependent hydrolase;protein_id=WP_016190874.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4386933 4387895 . - . ID=gene-LU631_RS22955;Name=LU631_RS22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22955;old_locus_tag=LU631_22955 NZ_CP089940.1 Protein Homology CDS 4386933 4387895 . - 0 ID=cds-WP_016190873.1;Parent=gene-LU631_RS22955;Dbxref=Genbank:WP_016190873.1;Name=WP_016190873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848541.1;locus_tag=LU631_RS22955;product=DUF6363 domain-containing protein;protein_id=WP_016190873.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4388081 4388703 . + . ID=gene-LU631_RS22960;Name=LU631_RS22960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22960;old_locus_tag=LU631_22960;pseudo=true NZ_CP089940.1 Protein Homology CDS 4388081 4388703 . + 0 ID=cds-LU631_RS22960;Parent=gene-LU631_RS22960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=LU631_RS22960;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4388949 4390157 . - . ID=gene-LU631_RS22965;Name=LU631_RS22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22965;old_locus_tag=LU631_22965 NZ_CP089940.1 Protein Homology CDS 4388949 4390157 . - 0 ID=cds-WP_016190871.1;Parent=gene-LU631_RS22965;Dbxref=Genbank:WP_016190871.1;Name=WP_016190871.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU631_RS22965;product=IS256 family transposase;protein_id=WP_016190871.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4390254 4390415 . - . ID=gene-LU631_RS22970;Name=LU631_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22970;old_locus_tag=LU631_22970 NZ_CP089940.1 Protein Homology CDS 4390254 4390415 . - 0 ID=cds-WP_016190870.1;Parent=gene-LU631_RS22970;Dbxref=Genbank:WP_016190870.1;Name=WP_016190870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191683.1;locus_tag=LU631_RS22970;product=DUF1328 domain-containing protein;protein_id=WP_016190870.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4390556 4391170 . - . ID=gene-LU631_RS22975;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=LU631_RS22975;old_locus_tag=LU631_22975 NZ_CP089940.1 Protein Homology CDS 4390556 4391170 . - 0 ID=cds-WP_016190869.1;Parent=gene-LU631_RS22975;Dbxref=Genbank:WP_016190869.1;Name=WP_016190869.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009087205.1;locus_tag=LU631_RS22975;product=molecular chaperone OsmY;protein_id=WP_016190869.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4391477 4391914 . - . ID=gene-LU631_RS22980;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS22980;old_locus_tag=LU631_22980 NZ_CP089940.1 Protein Homology CDS 4391477 4391914 . - 0 ID=cds-WP_016190868.1;Parent=gene-LU631_RS22980;Dbxref=Genbank:WP_016190868.1;Name=WP_016190868.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS22980;product=IS200/IS605 family transposase;protein_id=WP_016190868.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4392086 4393675 . - . ID=gene-LU631_RS22985;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=LU631_RS22985;old_locus_tag=LU631_22985 NZ_CP089940.1 Protein Homology CDS 4392086 4393675 . - 0 ID=cds-WP_016190867.1;Parent=gene-LU631_RS22985;Dbxref=Genbank:WP_016190867.1;Name=WP_016190867.1;Ontology_term=GO:0006415,GO:0003747,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170782.1;locus_tag=LU631_RS22985;product=peptide chain release factor 3;protein_id=WP_016190867.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4393902 4395122 . - . ID=gene-LU631_RS22990;Name=LU631_RS22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS22990;old_locus_tag=LU631_22990 NZ_CP089940.1 Protein Homology CDS 4393902 4395122 . - 0 ID=cds-WP_046372069.1;Parent=gene-LU631_RS22990;Dbxref=Genbank:WP_046372069.1;Name=WP_046372069.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025244073.1;locus_tag=LU631_RS22990;product=ISL3 family transposase;protein_id=WP_046372069.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4395221 4395471 . + . ID=gene-LU631_RS22995;Name=LU631_RS22995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS22995;old_locus_tag=LU631_22995;pseudo=true NZ_CP089940.1 Protein Homology CDS 4395221 4395471 . + 0 ID=cds-LU631_RS22995;Parent=gene-LU631_RS22995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001217543.1;locus_tag=LU631_RS22995;product=DinI-like family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4395613 4396821 . + . ID=gene-LU631_RS23000;Name=LU631_RS23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23000;old_locus_tag=LU631_23000 NZ_CP089940.1 Protein Homology CDS 4395613 4396821 . + 0 ID=cds-WP_046372070.1;Parent=gene-LU631_RS23000;Dbxref=Genbank:WP_046372070.1;Name=WP_046372070.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS23000;product=IS256 family transposase;protein_id=WP_046372070.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4397098 4397640 . - . ID=gene-LU631_RS23005;Name=LU631_RS23005;end_range=4397640,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS23005;old_locus_tag=LU631_23005;partial=true;pseudo=true;start_range=.,4397098 NZ_CP089940.1 Protein Homology CDS 4397098 4397640 . - 0 ID=cds-LU631_RS23005;Parent=gene-LU631_RS23005;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4397640,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011920327.1;locus_tag=LU631_RS23005;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,4397098;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4397622 4397964 . - . ID=gene-LU631_RS23010;Name=LU631_RS23010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS23010;old_locus_tag=LU631_23010;partial=true;pseudo=true;start_range=.,4397622 NZ_CP089940.1 Protein Homology CDS 4397622 4397964 . - 0 ID=cds-LU631_RS23010;Parent=gene-LU631_RS23010;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=LU631_RS23010;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,4397622;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4398018 4398122 . + . ID=gene-LU631_RS23015;Name=LU631_RS23015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS23015;old_locus_tag=LU631_23015;partial=true;pseudo=true;start_range=.,4398018 NZ_CP089940.1 Protein Homology CDS 4398018 4398122 . + 0 ID=cds-LU631_RS23015;Parent=gene-LU631_RS23015;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=LU631_RS23015;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4398018;transl_table=11 NZ_CP089940.1 RefSeq gene 4398179 4399015 . - . ID=gene-LU631_RS23020;Name=LU631_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23020;old_locus_tag=LU631_23020 NZ_CP089940.1 Protein Homology CDS 4398179 4399015 . - 0 ID=cds-WP_016190863.1;Parent=gene-LU631_RS23020;Dbxref=Genbank:WP_016190863.1;Name=WP_016190863.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012738.2;locus_tag=LU631_RS23020;product=ABC transporter permease;protein_id=WP_016190863.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4399008 4399367 . - . ID=gene-LU631_RS23025;Name=LU631_RS23025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23025;old_locus_tag=LU631_23025 NZ_CP089940.1 GeneMarkS-2+ CDS 4399008 4399367 . - 0 ID=cds-WP_198292522.1;Parent=gene-LU631_RS23025;Dbxref=Genbank:WP_198292522.1;Name=WP_198292522.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS23025;product=ABC transporter ATP-binding protein;protein_id=WP_198292522.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4399753 4399893 . + . ID=gene-LU631_RS23030;Name=LU631_RS23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23030;old_locus_tag=LU631_23030 NZ_CP089940.1 GeneMarkS-2+ CDS 4399753 4399893 . + 0 ID=cds-WP_161796965.1-21;Parent=gene-LU631_RS23030;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS23030;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4399902 4401116 . + . ID=gene-LU631_RS23035;Name=LU631_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23035;old_locus_tag=LU631_23035 NZ_CP089940.1 Protein Homology CDS 4399902 4401116 . + 0 ID=cds-WP_046371879.1-20;Parent=gene-LU631_RS23035;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS23035;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4401142 4401579 . - . ID=gene-LU631_RS23040;Name=LU631_RS23040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23040;old_locus_tag=LU631_23040 NZ_CP089940.1 Protein Homology CDS 4401142 4401579 . - 0 ID=cds-WP_052734710.1;Parent=gene-LU631_RS23040;Dbxref=Genbank:WP_052734710.1;Name=WP_052734710.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LU631_RS23040;product=ATP-binding cassette domain-containing protein;protein_id=WP_052734710.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4401701 4402909 . + . ID=gene-LU631_RS23045;Name=LU631_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23045;old_locus_tag=LU631_23045 NZ_CP089940.1 Protein Homology CDS 4401701 4402909 . + 0 ID=cds-WP_046372072.1;Parent=gene-LU631_RS23045;Dbxref=Genbank:WP_046372072.1;Name=WP_046372072.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS23045;product=IS256 family transposase;protein_id=WP_046372072.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4402966 4404618 . - . ID=gene-LU631_RS23050;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=LU631_RS23050;old_locus_tag=LU631_23050 NZ_CP089940.1 Protein Homology CDS 4402966 4404618 . - 0 ID=cds-WP_016190861.1;Parent=gene-LU631_RS23050;Dbxref=Genbank:WP_016190861.1;Name=WP_016190861.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017801121.1;locus_tag=LU631_RS23050;product=malate dehydrogenase (quinone);protein_id=WP_016190861.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4405926 4407134 . + . ID=gene-LU631_RS23055;Name=LU631_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23055;old_locus_tag=LU631_23055 NZ_CP089940.1 Protein Homology CDS 4405926 4407134 . + 0 ID=cds-WP_016190860.1;Parent=gene-LU631_RS23055;Dbxref=Genbank:WP_016190860.1;Name=WP_016190860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009639053.1;locus_tag=LU631_RS23055;product=FAD-dependent oxidoreductase;protein_id=WP_016190860.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4407166 4408226 . - . ID=gene-LU631_RS23060;Name=LU631_RS23060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS23060;old_locus_tag=LU631_23060;pseudo=true NZ_CP089940.1 Protein Homology CDS 4407166 4408226 . - 0 ID=cds-LU631_RS23060;Parent=gene-LU631_RS23060;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015697192.1;locus_tag=LU631_RS23060;product=AI-2E family transporter;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4408527 4410011 . - . ID=gene-LU631_RS23065;Name=LU631_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23065;old_locus_tag=LU631_23065 NZ_CP089940.1 Protein Homology CDS 4408527 4410011 . - 0 ID=cds-WP_016190859.1;Parent=gene-LU631_RS23065;Dbxref=Genbank:WP_016190859.1;Name=WP_016190859.1;Ontology_term=GO:0008272,GO:0015116,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442592.1;locus_tag=LU631_RS23065;product=SulP family inorganic anion transporter;protein_id=WP_016190859.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4410008 4410634 . - . ID=gene-LU631_RS23070;Name=LU631_RS23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23070;old_locus_tag=LU631_23070 NZ_CP089940.1 Protein Homology CDS 4410008 4410634 . - 0 ID=cds-WP_016190858.1;Parent=gene-LU631_RS23070;Dbxref=Genbank:WP_016190858.1;Name=WP_016190858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013510613.1;locus_tag=LU631_RS23070;product=carbonic anhydrase;protein_id=WP_016190858.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4411705 4413207 . - . ID=gene-LU631_RS23075;Name=LU631_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23075;old_locus_tag=LU631_23075 NZ_CP089940.1 Protein Homology CDS 4411705 4413207 . - 0 ID=cds-WP_016190857.1;Parent=gene-LU631_RS23075;Dbxref=Genbank:WP_016190857.1;Name=WP_016190857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004108837.1;locus_tag=LU631_RS23075;product=sugar porter family MFS transporter;protein_id=WP_016190857.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4413607 4414506 . - . ID=gene-LU631_RS23080;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=LU631_RS23080;old_locus_tag=LU631_23080 NZ_CP089940.1 Protein Homology CDS 4413607 4414506 . - 0 ID=cds-WP_016190856.1;Parent=gene-LU631_RS23080;Dbxref=Genbank:WP_016190856.1;Name=WP_016190856.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224831.1;locus_tag=LU631_RS23080;product=myo-inosose-2 dehydratase;protein_id=WP_016190856.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4414506 4415414 . - . ID=gene-LU631_RS23085;Name=LU631_RS23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23085;old_locus_tag=LU631_23085 NZ_CP089940.1 Protein Homology CDS 4414506 4415414 . - 0 ID=cds-WP_016190855.1;Parent=gene-LU631_RS23085;Dbxref=Genbank:WP_016190855.1;Name=WP_016190855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224830.1;locus_tag=LU631_RS23085;product=sugar phosphate isomerase/epimerase;protein_id=WP_016190855.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4415452 4416465 . - . ID=gene-LU631_RS23090;Name=LU631_RS23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23090;old_locus_tag=LU631_23090 NZ_CP089940.1 Protein Homology CDS 4415452 4416465 . - 0 ID=cds-WP_016190854.1;Parent=gene-LU631_RS23090;Dbxref=Genbank:WP_016190854.1;Name=WP_016190854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224829.1;locus_tag=LU631_RS23090;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_016190854.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4416509 4418449 . - . ID=gene-LU631_RS23095;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=LU631_RS23095;old_locus_tag=LU631_23095 NZ_CP089940.1 Protein Homology CDS 4416509 4418449 . - 0 ID=cds-WP_016190853.1;Parent=gene-LU631_RS23095;Dbxref=Genbank:WP_016190853.1;Name=WP_016190853.1;Ontology_term=GO:0019310,GO:0000287,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=magnesium ion binding|0000287||IEA,hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224828.1;locus_tag=LU631_RS23095;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_016190853.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4418978 4420891 . + . ID=gene-LU631_RS23100;Name=iolC;gbkey=Gene;gene=iolC;gene_biotype=protein_coding;locus_tag=LU631_RS23100;old_locus_tag=LU631_23100 NZ_CP089940.1 Protein Homology CDS 4418978 4420891 . + 0 ID=cds-WP_016190852.1;Parent=gene-LU631_RS23100;Dbxref=Genbank:WP_016190852.1;Name=WP_016190852.1;Ontology_term=GO:0019310,GO:0047590;gbkey=CDS;gene=iolC;go_function=5-dehydro-2-deoxygluconokinase activity|0047590||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224826.1;locus_tag=LU631_RS23100;product=5-dehydro-2-deoxygluconokinase;protein_id=WP_016190852.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4421042 4421896 . + . ID=gene-LU631_RS23105;Name=LU631_RS23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23105;old_locus_tag=LU631_23105 NZ_CP089940.1 Protein Homology CDS 4421042 4421896 . + 0 ID=cds-WP_016190851.1;Parent=gene-LU631_RS23105;Dbxref=Genbank:WP_016190851.1;Name=WP_016190851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224825.1;locus_tag=LU631_RS23105;product=MurR/RpiR family transcriptional regulator;protein_id=WP_016190851.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4421980 4422789 . - . ID=gene-LU631_RS23110;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=LU631_RS23110;old_locus_tag=LU631_23110 NZ_CP089940.1 Protein Homology CDS 4421980 4422789 . - 0 ID=cds-WP_016190850.1;Parent=gene-LU631_RS23110;Dbxref=Genbank:WP_016190850.1;Name=WP_016190850.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224824.1;locus_tag=LU631_RS23110;product=5-deoxy-glucuronate isomerase;protein_id=WP_016190850.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4422808 4424313 . - . ID=gene-LU631_RS23115;Name=LU631_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23115;old_locus_tag=LU631_23115 NZ_CP089940.1 Protein Homology CDS 4422808 4424313 . - 0 ID=cds-WP_016190849.1;Parent=gene-LU631_RS23115;Dbxref=Genbank:WP_016190849.1;Name=WP_016190849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224823.1;locus_tag=LU631_RS23115;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_016190849.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4424639 4425436 . + . ID=gene-LU631_RS23120;Name=LU631_RS23120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS23120;old_locus_tag=LU631_23120;pseudo=true NZ_CP089940.1 Protein Homology CDS 4424639 4425436 . + 0 ID=cds-LU631_RS23120;Parent=gene-LU631_RS23120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807118.1;locus_tag=LU631_RS23120;product=TIM barrel protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4425679 4426770 . + . ID=gene-LU631_RS23125;Name=LU631_RS23125;end_range=4426770,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS23125;old_locus_tag=LU631_23125;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4425679 4426770 . + 0 ID=cds-LU631_RS23125;Parent=gene-LU631_RS23125;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4426770,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015835711.1;locus_tag=LU631_RS23125;partial=true;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4426800 4427927 . - . ID=gene-LU631_RS23130;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=LU631_RS23130;old_locus_tag=LU631_23130 NZ_CP089940.1 Protein Homology CDS 4426800 4427927 . - 0 ID=cds-WP_016190843.1;Parent=gene-LU631_RS23130;Dbxref=Genbank:WP_016190843.1;Name=WP_016190843.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118296.1;locus_tag=LU631_RS23130;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_016190843.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4428200 4428706 . + . ID=gene-LU631_RS23135;Name=LU631_RS23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23135;old_locus_tag=LU631_23135 NZ_CP089940.1 Protein Homology CDS 4428200 4428706 . + 0 ID=cds-WP_016190842.1;Parent=gene-LU631_RS23135;Dbxref=Genbank:WP_016190842.1;Name=WP_016190842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442597.1;locus_tag=LU631_RS23135;product=M48 family metallopeptidase;protein_id=WP_016190842.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4428886 4429674 . + . ID=gene-LU631_RS23140;Name=LU631_RS23140;end_range=4429674,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS23140;old_locus_tag=LU631_23140;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4428886 4429674 . + 0 ID=cds-LU631_RS23140;Parent=gene-LU631_RS23140;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=4429674,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS23140;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4429915 4430886 . + . ID=gene-LU631_RS23145;Name=LU631_RS23145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23145;old_locus_tag=LU631_23145 NZ_CP089940.1 Protein Homology CDS 4429915 4430886 . + 0 ID=cds-WP_016190839.1;Parent=gene-LU631_RS23145;Dbxref=Genbank:WP_016190839.1;Name=WP_016190839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017801349.1;locus_tag=LU631_RS23145;product=TerC family protein;protein_id=WP_016190839.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4431071 4432306 . + . ID=gene-LU631_RS23150;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=LU631_RS23150;old_locus_tag=LU631_23150 NZ_CP089940.1 Protein Homology CDS 4431071 4432306 . + 0 ID=cds-WP_016190838.1;Parent=gene-LU631_RS23150;Dbxref=Genbank:WP_016190838.1;Name=WP_016190838.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200550.1;locus_tag=LU631_RS23150;product=serine/threonine transporter SstT;protein_id=WP_016190838.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4432972 4433634 . + . ID=gene-LU631_RS23155;Name=LU631_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23155;old_locus_tag=LU631_23155 NZ_CP089940.1 Protein Homology CDS 4432972 4433634 . + 0 ID=cds-WP_016190836.1;Parent=gene-LU631_RS23155;Dbxref=Genbank:WP_016190836.1;Name=WP_016190836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015699452.1;locus_tag=LU631_RS23155;product=DedA family protein;protein_id=WP_016190836.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4433604 4434032 . + . ID=gene-LU631_RS23160;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=LU631_RS23160;old_locus_tag=LU631_23160 NZ_CP089940.1 Protein Homology CDS 4433604 4434032 . + 0 ID=cds-WP_040465537.1;Parent=gene-LU631_RS23160;Dbxref=Genbank:WP_040465537.1;Name=WP_040465537.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015961955.1;locus_tag=LU631_RS23160;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_040465537.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4434198 4434572 . + . ID=gene-LU631_RS23165;Name=LU631_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23165;old_locus_tag=LU631_23165 NZ_CP089940.1 Protein Homology CDS 4434198 4434572 . + 0 ID=cds-WP_016190834.1;Parent=gene-LU631_RS23165;Dbxref=Genbank:WP_016190834.1;Name=WP_016190834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013027330.1;locus_tag=LU631_RS23165;product=DUF1090 domain-containing protein;protein_id=WP_016190834.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4434608 4434913 . + . ID=gene-LU631_RS23170;Name=LU631_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23170;old_locus_tag=LU631_23170 NZ_CP089940.1 Protein Homology CDS 4434608 4434913 . + 0 ID=cds-WP_016190833.1;Parent=gene-LU631_RS23170;Dbxref=Genbank:WP_016190833.1;Name=WP_016190833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709853.1;locus_tag=LU631_RS23170;product=YqjD family protein;protein_id=WP_016190833.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4434916 4435308 . + . ID=gene-LU631_RS23175;Name=LU631_RS23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23175;old_locus_tag=LU631_23175 NZ_CP089940.1 Protein Homology CDS 4434916 4435308 . + 0 ID=cds-WP_016190832.1;Parent=gene-LU631_RS23175;Dbxref=Genbank:WP_016190832.1;Name=WP_016190832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542344.1;locus_tag=LU631_RS23175;product=phage holin family protein;protein_id=WP_016190832.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4435308 4435589 . + . ID=gene-LU631_RS23180;Name=LU631_RS23180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23180;old_locus_tag=LU631_23180 NZ_CP089940.1 Protein Homology CDS 4435308 4435589 . + 0 ID=cds-WP_016190831.1;Parent=gene-LU631_RS23180;Dbxref=Genbank:WP_016190831.1;Name=WP_016190831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442611.1;locus_tag=LU631_RS23180;product=YqjK-like family protein;protein_id=WP_016190831.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4435820 4436212 . + . ID=gene-LU631_RS23185;Name=LU631_RS23185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23185;old_locus_tag=LU631_23185 NZ_CP089940.1 Protein Homology CDS 4435820 4436212 . + 0 ID=cds-WP_016190830.1;Parent=gene-LU631_RS23185;Dbxref=Genbank:WP_016190830.1;Name=WP_016190830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=LU631_RS23185;product=DoxX family protein;protein_id=WP_016190830.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4436520 4436813 . - . ID=gene-LU631_RS23190;Name=LU631_RS23190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23190;old_locus_tag=LU631_23190 NZ_CP089940.1 Protein Homology CDS 4436520 4436813 . - 0 ID=cds-WP_016190829.1;Parent=gene-LU631_RS23190;Dbxref=Genbank:WP_016190829.1;Name=WP_016190829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453441.1;locus_tag=LU631_RS23190;product=hypothetical protein;protein_id=WP_016190829.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4437624 4438526 . - . ID=gene-LU631_RS23195;Name=LU631_RS23195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23195;old_locus_tag=LU631_23195 NZ_CP089940.1 Protein Homology CDS 4437624 4438526 . - 0 ID=cds-WP_016190828.1;Parent=gene-LU631_RS23195;Dbxref=Genbank:WP_016190828.1;Name=WP_016190828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001041009.1;locus_tag=LU631_RS23195;product=LysR family transcriptional regulator;protein_id=WP_016190828.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4438650 4439354 . + . ID=gene-LU631_RS23200;Name=LU631_RS23200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23200;old_locus_tag=LU631_23200 NZ_CP089940.1 Protein Homology CDS 4438650 4439354 . + 0 ID=cds-WP_016190827.1;Parent=gene-LU631_RS23200;Dbxref=Genbank:WP_016190827.1;Name=WP_016190827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633543.1;locus_tag=LU631_RS23200;product=pirin family protein;protein_id=WP_016190827.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4439438 4440013 . - . ID=gene-LU631_RS23205;Name=LU631_RS23205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23205;old_locus_tag=LU631_23205 NZ_CP089940.1 Protein Homology CDS 4439438 4440013 . - 0 ID=cds-WP_016190826.1;Parent=gene-LU631_RS23205;Dbxref=Genbank:WP_016190826.1;Name=WP_016190826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799342.1;locus_tag=LU631_RS23205;product=UPF0149 family protein;protein_id=WP_016190826.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4440507 4441715 . - . ID=gene-LU631_RS23210;Name=LU631_RS23210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23210;old_locus_tag=LU631_23210 NZ_CP089940.1 Protein Homology CDS 4440507 4441715 . - 0 ID=cds-WP_016190825.1;Parent=gene-LU631_RS23210;Dbxref=Genbank:WP_016190825.1;Name=WP_016190825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224772.1;locus_tag=LU631_RS23210;product=aldose 1-epimerase family protein;protein_id=WP_016190825.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4442175 4442594 . - . ID=gene-LU631_RS23215;Name=LU631_RS23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23215;old_locus_tag=LU631_23215 NZ_CP089940.1 GeneMarkS-2+ CDS 4442175 4442594 . - 0 ID=cds-WP_016190824.1;Parent=gene-LU631_RS23215;Dbxref=Genbank:WP_016190824.1;Name=WP_016190824.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS23215;product=hypothetical protein;protein_id=WP_016190824.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4442742 4443080 . + . ID=gene-LU631_RS23220;Name=LU631_RS23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23220;old_locus_tag=LU631_23220 NZ_CP089940.1 GeneMarkS-2+ CDS 4442742 4443080 . + 0 ID=cds-WP_016190823.1;Parent=gene-LU631_RS23220;Dbxref=Genbank:WP_016190823.1;Name=WP_016190823.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS23220;product=hypothetical protein;protein_id=WP_016190823.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4443873 4444252 . - . ID=gene-LU631_RS23225;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=LU631_RS23225;old_locus_tag=LU631_23225 NZ_CP089940.1 cmsearch RNase_P_RNA 4443873 4444252 . - . ID=rna-LU631_RS23225;Parent=gene-LU631_RS23225;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS23225;product=RNase P RNA component class A NZ_CP089940.1 cmsearch exon 4443873 4444252 . - . ID=exon-LU631_RS23225-1;Parent=rna-LU631_RS23225;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS23225;product=RNase P RNA component class A NZ_CP089940.1 RefSeq gene 4444285 4445142 . - . ID=gene-LU631_RS23230;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=LU631_RS23230;old_locus_tag=LU631_23230 NZ_CP089940.1 Protein Homology CDS 4444285 4445142 . - 0 ID=cds-WP_016190822.1;Parent=gene-LU631_RS23230;Dbxref=Genbank:WP_016190822.1;Name=WP_016190822.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200535.1;locus_tag=LU631_RS23230;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_016190822.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4445205 4447253 . + . ID=gene-LU631_RS23235;Name=LU631_RS23235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23235;old_locus_tag=LU631_23235 NZ_CP089940.1 Protein Homology CDS 4445205 4447253 . + 0 ID=cds-WP_016190821.1;Parent=gene-LU631_RS23235;Dbxref=Genbank:WP_016190821.1;Name=WP_016190821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000249104.1;locus_tag=LU631_RS23235;product=penicillin-binding protein activator;protein_id=WP_016190821.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4447211 4447603 . + . ID=gene-LU631_RS23240;Name=LU631_RS23240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23240;old_locus_tag=LU631_23240 NZ_CP089940.1 Protein Homology CDS 4447211 4447603 . + 0 ID=cds-WP_016190820.1;Parent=gene-LU631_RS23240;Dbxref=Genbank:WP_016190820.1;Name=WP_016190820.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160066.1;locus_tag=LU631_RS23240;product=YraN family protein;protein_id=WP_016190820.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4447636 4448226 . + . ID=gene-LU631_RS23245;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=LU631_RS23245;old_locus_tag=LU631_23245 NZ_CP089940.1 Protein Homology CDS 4447636 4448226 . + 0 ID=cds-WP_016190819.1;Parent=gene-LU631_RS23245;Dbxref=Genbank:WP_016190819.1;Name=WP_016190819.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001483830.1;locus_tag=LU631_RS23245;product=DnaA initiator-associating protein DiaA;protein_id=WP_016190819.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4448237 4448809 . + . ID=gene-LU631_RS23250;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=LU631_RS23250;old_locus_tag=LU631_23250 NZ_CP089940.1 Protein Homology CDS 4448237 4448809 . + 0 ID=cds-WP_016190818.1;Parent=gene-LU631_RS23250;Dbxref=Genbank:WP_016190818.1;Name=WP_016190818.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666905.1;locus_tag=LU631_RS23250;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_016190818.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4448895 4450814 . - . ID=gene-LU631_RS23255;Name=LU631_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23255;old_locus_tag=LU631_23255 NZ_CP089940.1 Protein Homology CDS 4448895 4450814 . - 0 ID=cds-WP_016190817.1;Parent=gene-LU631_RS23255;Dbxref=Genbank:WP_016190817.1;Name=WP_016190817.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019104891.1;locus_tag=LU631_RS23255;product=PRD domain-containing protein;protein_id=WP_016190817.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4450963 4452108 . - . ID=gene-LU631_RS23260;Name=LU631_RS23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23260;old_locus_tag=LU631_23260 NZ_CP089940.1 Protein Homology CDS 4450963 4452108 . - 0 ID=cds-WP_016190816.1;Parent=gene-LU631_RS23260;Dbxref=Genbank:WP_016190816.1;Name=WP_016190816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105935.1;locus_tag=LU631_RS23260;product=lactonase family protein;protein_id=WP_016190816.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4452173 4452913 . - . ID=gene-LU631_RS23265;Name=LU631_RS23265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23265;old_locus_tag=LU631_23265 NZ_CP089940.1 Protein Homology CDS 4452173 4452913 . - 0 ID=cds-WP_016190815.1;Parent=gene-LU631_RS23265;Dbxref=Genbank:WP_016190815.1;Name=WP_016190815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441727.1;locus_tag=LU631_RS23265;product=KDGP aldolase family protein;protein_id=WP_016190815.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4452910 4454031 . - . ID=gene-LU631_RS23270;Name=LU631_RS23270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23270;old_locus_tag=LU631_23270 NZ_CP089940.1 Protein Homology CDS 4452910 4454031 . - 0 ID=cds-WP_016190814.1;Parent=gene-LU631_RS23270;Dbxref=Genbank:WP_016190814.1;Name=WP_016190814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170910.1;locus_tag=LU631_RS23270;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_016190814.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4454015 4455151 . - . ID=gene-LU631_RS23275;Name=LU631_RS23275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23275;old_locus_tag=LU631_23275 NZ_CP089940.1 Protein Homology CDS 4454015 4455151 . - 0 ID=cds-WP_016190813.1;Parent=gene-LU631_RS23275;Dbxref=Genbank:WP_016190813.1;Name=WP_016190813.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542356.1;locus_tag=LU631_RS23275;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_016190813.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4455229 4455873 . - . ID=gene-LU631_RS23280;Name=LU631_RS23280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23280;old_locus_tag=LU631_23280 NZ_CP089940.1 Protein Homology CDS 4455229 4455873 . - 0 ID=cds-WP_016190812.1;Parent=gene-LU631_RS23280;Dbxref=Genbank:WP_016190812.1;Name=WP_016190812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160075.1;locus_tag=LU631_RS23280;product=DUF4310 family protein;protein_id=WP_016190812.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4455887 4456663 . - . ID=gene-LU631_RS23285;Name=LU631_RS23285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23285;old_locus_tag=LU631_23285 NZ_CP089940.1 Protein Homology CDS 4455887 4456663 . - 0 ID=cds-WP_016190811.1;Parent=gene-LU631_RS23285;Dbxref=Genbank:WP_016190811.1;Name=WP_016190811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224781.1;locus_tag=LU631_RS23285;product=DUF4311 domain-containing protein;protein_id=WP_016190811.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4456736 4457029 . - . ID=gene-LU631_RS23290;Name=LU631_RS23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23290;old_locus_tag=LU631_23290 NZ_CP089940.1 Protein Homology CDS 4456736 4457029 . - 0 ID=cds-WP_016190810.1;Parent=gene-LU631_RS23290;Dbxref=Genbank:WP_016190810.1;Name=WP_016190810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015368575.1;locus_tag=LU631_RS23290;product=DUF4312 family protein;protein_id=WP_016190810.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4457033 4457395 . - . ID=gene-LU631_RS23295;Name=LU631_RS23295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23295;old_locus_tag=LU631_23295 NZ_CP089940.1 Protein Homology CDS 4457033 4457395 . - 0 ID=cds-WP_016190809.1;Parent=gene-LU631_RS23295;Dbxref=Genbank:WP_016190809.1;Name=WP_016190809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=LU631_RS23295;product=SFCGS family glycine-rich protein;protein_id=WP_016190809.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4457418 4457801 . - . ID=gene-LU631_RS23300;Name=LU631_RS23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23300;old_locus_tag=LU631_23300 NZ_CP089940.1 Protein Homology CDS 4457418 4457801 . - 0 ID=cds-WP_016190808.1;Parent=gene-LU631_RS23300;Dbxref=Genbank:WP_016190808.1;Name=WP_016190808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009087405.1;locus_tag=LU631_RS23300;product=hypothetical protein;protein_id=WP_016190808.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4458195 4458464 . - . ID=gene-LU631_RS23305;Name=LU631_RS23305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23305;old_locus_tag=LU631_23305 NZ_CP089940.1 GeneMarkS-2+ CDS 4458195 4458464 . - 0 ID=cds-WP_233481949.1;Parent=gene-LU631_RS23305;Dbxref=Genbank:WP_233481949.1;Name=WP_233481949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS23305;product=hypothetical protein;protein_id=WP_233481949.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4458647 4459030 . - . ID=gene-LU631_RS23310;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=LU631_RS23310;old_locus_tag=LU631_23310 NZ_CP089940.1 Protein Homology CDS 4458647 4459030 . - 0 ID=cds-WP_016190806.1;Parent=gene-LU631_RS23310;Dbxref=Genbank:WP_016190806.1;Name=WP_016190806.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003855527.1;locus_tag=LU631_RS23310;product=cytochrome b562;protein_id=WP_016190806.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4459120 4460460 . - . ID=gene-LU631_RS23315;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=LU631_RS23315;old_locus_tag=LU631_23315 NZ_CP089940.1 Protein Homology CDS 4459120 4460460 . - 0 ID=cds-WP_016190805.1;Parent=gene-LU631_RS23315;Dbxref=Genbank:WP_016190805.1;Name=WP_016190805.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224775.1;locus_tag=LU631_RS23315;product=metalloprotease PmbA;protein_id=WP_016190805.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4460627 4461166 . + . ID=gene-LU631_RS23320;Name=LU631_RS23320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23320;old_locus_tag=LU631_23320 NZ_CP089940.1 Protein Homology CDS 4460627 4461166 . + 0 ID=cds-WP_016190804.1;Parent=gene-LU631_RS23320;Dbxref=Genbank:WP_016190804.1;Name=WP_016190804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166270.1;locus_tag=LU631_RS23320;product=ribosome-associated protein;protein_id=WP_016190804.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4461228 4462607 . - . ID=gene-LU631_RS23325;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=LU631_RS23325;old_locus_tag=LU631_23325 NZ_CP089940.1 Protein Homology CDS 4461228 4462607 . - 0 ID=cds-WP_016190803.1;Parent=gene-LU631_RS23325;Dbxref=Genbank:WP_016190803.1;Name=WP_016190803.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160084.1;locus_tag=LU631_RS23325;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_016190803.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4462776 4463774 . + . ID=gene-LU631_RS23330;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=LU631_RS23330;old_locus_tag=LU631_23330 NZ_CP089940.1 Protein Homology CDS 4462776 4463774 . + 0 ID=cds-WP_016190802.1;Parent=gene-LU631_RS23330;Dbxref=Genbank:WP_016190802.1;Name=WP_016190802.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=LU631_RS23330;product=class 1 fructose-bisphosphatase;protein_id=WP_016190802.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4463875 4465437 . - . ID=gene-LU631_RS23335;Name=LU631_RS23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23335;old_locus_tag=LU631_23335 NZ_CP089940.1 Protein Homology CDS 4463875 4465437 . - 0 ID=cds-WP_016190801.1;Parent=gene-LU631_RS23335;Dbxref=Genbank:WP_016190801.1;Name=WP_016190801.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200515.1;locus_tag=LU631_RS23335;product=methyl-accepting chemotaxis protein;protein_id=WP_016190801.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4465905 4466435 . + . ID=gene-LU631_RS23340;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=LU631_RS23340;old_locus_tag=LU631_23340 NZ_CP089940.1 Protein Homology CDS 4465905 4466435 . + 0 ID=cds-WP_016190800.1;Parent=gene-LU631_RS23340;Dbxref=Genbank:WP_016190800.1;Name=WP_016190800.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463275.1;locus_tag=LU631_RS23340;product=inorganic diphosphatase;protein_id=WP_016190800.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4466740 4467093 . - . ID=gene-LU631_RS23345;Name=LU631_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23345;old_locus_tag=LU631_23345 NZ_CP089940.1 Protein Homology CDS 4466740 4467093 . - 0 ID=cds-WP_016190799.1;Parent=gene-LU631_RS23345;Dbxref=Genbank:WP_016190799.1;Name=WP_016190799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013027378.1;locus_tag=LU631_RS23345;product=gamma-glutamylcyclotransferase;protein_id=WP_016190799.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4467096 4470863 . - . ID=gene-LU631_RS23350;Name=LU631_RS23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23350;old_locus_tag=LU631_23350 NZ_CP089940.1 Protein Homology CDS 4467096 4470863 . - 0 ID=cds-WP_016190798.1;Parent=gene-LU631_RS23350;Dbxref=Genbank:WP_016190798.1;Name=WP_016190798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060815.1;locus_tag=LU631_RS23350;product=translocation/assembly module TamB domain-containing protein;protein_id=WP_016190798.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4470860 4472584 . - . ID=gene-LU631_RS23355;Name=LU631_RS23355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23355;old_locus_tag=LU631_23355 NZ_CP089940.1 Protein Homology CDS 4470860 4472584 . - 0 ID=cds-WP_016190797.1;Parent=gene-LU631_RS23355;Dbxref=Genbank:WP_016190797.1;Name=WP_016190797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014538520.1;locus_tag=LU631_RS23355;product=autotransporter assembly complex protein TamA;protein_id=WP_016190797.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4473104 4474435 . + . ID=gene-LU631_RS23360;Name=LU631_RS23360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23360;old_locus_tag=LU631_23360 NZ_CP089940.1 Protein Homology CDS 4473104 4474435 . + 0 ID=cds-WP_016190796.1;Parent=gene-LU631_RS23360;Dbxref=Genbank:WP_016190796.1;Name=WP_016190796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013027381.1;locus_tag=LU631_RS23360;product=hemolysin family protein;protein_id=WP_016190796.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4474557 4474763 . - . ID=gene-LU631_RS23365;Name=LU631_RS23365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23365;old_locus_tag=LU631_23365 NZ_CP089940.1 Protein Homology CDS 4474557 4474763 . - 0 ID=cds-WP_016190795.1;Parent=gene-LU631_RS23365;Dbxref=Genbank:WP_016190795.1;Name=WP_016190795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160093.1;locus_tag=LU631_RS23365;product=DUF1107 domain-containing protein;protein_id=WP_016190795.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4475066 4475648 . + . ID=gene-LU631_RS23370;Name=LU631_RS23370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS23370;old_locus_tag=LU631_23370;pseudo=true NZ_CP089940.1 Protein Homology CDS 4475066 4475648 . + 0 ID=cds-LU631_RS23370;Parent=gene-LU631_RS23370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003830421.1;locus_tag=LU631_RS23370;product=YtfJ family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4475690 4476430 . - . ID=gene-LU631_RS23375;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=LU631_RS23375;old_locus_tag=LU631_23375 NZ_CP089940.1 Protein Homology CDS 4475690 4476430 . - 0 ID=cds-WP_016190792.1;Parent=gene-LU631_RS23375;Dbxref=Genbank:WP_016190792.1;Name=WP_016190792.1;Ontology_term=GO:0046855,GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001825828.1;locus_tag=LU631_RS23375;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_016190792.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4476743 4477156 . + . ID=gene-LU631_RS23380;Name=LU631_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23380;old_locus_tag=LU631_23380 NZ_CP089940.1 GeneMarkS-2+ CDS 4476743 4477156 . + 0 ID=cds-WP_016190791.1;Parent=gene-LU631_RS23380;Dbxref=Genbank:WP_016190791.1;Name=WP_016190791.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS23380;product=hypothetical protein;protein_id=WP_016190791.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4477303 4477638 . + . ID=gene-LU631_RS23385;Name=LU631_RS23385;end_range=4477638,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS23385;old_locus_tag=LU631_23385;partial=true;pseudo=true;start_range=.,4477303 NZ_CP089940.1 Protein Homology CDS 4477303 4477638 . + 0 ID=cds-LU631_RS23385;Parent=gene-LU631_RS23385;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4477638,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343747.1;locus_tag=LU631_RS23385;partial=true;product=transposase;pseudo=true;start_range=.,4477303;transl_table=11 NZ_CP089940.1 RefSeq gene 4478120 4479130 . - . ID=gene-LU631_RS23390;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=LU631_RS23390;old_locus_tag=LU631_23390 NZ_CP089940.1 Protein Homology CDS 4478120 4479130 . - 0 ID=cds-WP_016190789.1;Parent=gene-LU631_RS23390;Dbxref=Genbank:WP_016190789.1;Name=WP_016190789.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016517617.1;locus_tag=LU631_RS23390;product=protease modulator HflC;protein_id=WP_016190789.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4479134 4480375 . - . ID=gene-LU631_RS23395;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=LU631_RS23395;old_locus_tag=LU631_23395 NZ_CP089940.1 Protein Homology CDS 4479134 4480375 . - 0 ID=cds-WP_016190788.1;Parent=gene-LU631_RS23395;Dbxref=Genbank:WP_016190788.1;Name=WP_016190788.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666867.1;locus_tag=LU631_RS23395;product=FtsH protease activity modulator HflK;protein_id=WP_016190788.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4480443 4481723 . - . ID=gene-LU631_RS23400;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=LU631_RS23400;old_locus_tag=LU631_23400 NZ_CP089940.1 Protein Homology CDS 4480443 4481723 . - 0 ID=cds-WP_016190787.1;Parent=gene-LU631_RS23400;Dbxref=Genbank:WP_016190787.1;Name=WP_016190787.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434123.1;locus_tag=LU631_RS23400;product=GTPase HflX;protein_id=WP_016190787.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4481922 4482233 . - . ID=gene-LU631_RS23405;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=LU631_RS23405;old_locus_tag=LU631_23405 NZ_CP089940.1 Protein Homology CDS 4481922 4482233 . - 0 ID=cds-WP_016190786.1;Parent=gene-LU631_RS23405;Dbxref=Genbank:WP_016190786.1;Name=WP_016190786.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224716.1;locus_tag=LU631_RS23405;product=RNA chaperone Hfq;protein_id=WP_016190786.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4482335 4483285 . - . ID=gene-LU631_RS23410;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=LU631_RS23410;old_locus_tag=LU631_23410 NZ_CP089940.1 Protein Homology CDS 4482335 4483285 . - 0 ID=cds-WP_016190785.1;Parent=gene-LU631_RS23410;Dbxref=Genbank:WP_016190785.1;Name=WP_016190785.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200488.1;locus_tag=LU631_RS23410;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_016190785.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4483278 4485170 . - . ID=gene-LU631_RS23415;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=LU631_RS23415;old_locus_tag=LU631_23415 NZ_CP089940.1 Protein Homology CDS 4483278 4485170 . - 0 ID=cds-WP_016190784.1;Parent=gene-LU631_RS23415;Dbxref=Genbank:WP_016190784.1;Name=WP_016190784.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170945.1;locus_tag=LU631_RS23415;product=DNA mismatch repair endonuclease MutL;protein_id=WP_016190784.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4485242 4486903 . - . ID=gene-LU631_RS23420;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=LU631_RS23420;old_locus_tag=LU631_23420 NZ_CP089940.1 Protein Homology CDS 4485242 4486903 . - 0 ID=cds-WP_016190783.1;Parent=gene-LU631_RS23420;Dbxref=Genbank:WP_016190783.1;Name=WP_016190783.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200486.1;locus_tag=LU631_RS23420;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_016190783.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4486915 4487388 . - . ID=gene-LU631_RS23425;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=LU631_RS23425;old_locus_tag=LU631_23425 NZ_CP089940.1 Protein Homology CDS 4486915 4487388 . - 0 ID=cds-WP_016190782.1;Parent=gene-LU631_RS23425;Dbxref=Genbank:WP_016190782.1;Name=WP_016190782.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200485.1;locus_tag=LU631_RS23425;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_016190782.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4487388 4488908 . - . ID=gene-LU631_RS23430;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=LU631_RS23430;old_locus_tag=LU631_23430 NZ_CP089940.1 Protein Homology CDS 4487388 4488908 . - 0 ID=cds-WP_016190781.1;Parent=gene-LU631_RS23430;Dbxref=Genbank:WP_016190781.1;Name=WP_016190781.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160147.1;locus_tag=LU631_RS23430;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_016190781.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4488905 4489093 . - . ID=gene-LU631_RS23435;Name=LU631_RS23435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23435;old_locus_tag=LU631_23435 NZ_CP089940.1 GeneMarkS-2+ CDS 4488905 4489093 . - 0 ID=cds-WP_016190780.1;Parent=gene-LU631_RS23435;Dbxref=Genbank:WP_016190780.1;Name=WP_016190780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS23435;product=hypothetical protein;protein_id=WP_016190780.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4490277 4490352 . - . ID=gene-LU631_RS23440;Name=LU631_RS23440;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS23440;old_locus_tag=LU631_23440 NZ_CP089940.1 tRNAscan-SE tRNA 4490277 4490352 . - . ID=rna-LU631_RS23440;Parent=gene-LU631_RS23440;anticodon=(pos:complement(4490317..4490319));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS23440;product=tRNA-Gly NZ_CP089940.1 tRNAscan-SE exon 4490277 4490352 . - . ID=exon-LU631_RS23440-1;Parent=rna-LU631_RS23440;anticodon=(pos:complement(4490317..4490319));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS23440;product=tRNA-Gly NZ_CP089940.1 RefSeq pseudogene 4490806 4491558 . + . ID=gene-LU631_RS23445;Name=LU631_RS23445;end_range=4491558,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS23445;old_locus_tag=LU631_23445;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4490806 4491558 . + 0 ID=cds-LU631_RS23445;Parent=gene-LU631_RS23445;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4491558,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001744774.1;locus_tag=LU631_RS23445;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4491569 4492892 . - . ID=gene-LU631_RS23450;Name=LU631_RS23450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS23450;old_locus_tag=LU631_23450;pseudo=true NZ_CP089940.1 Protein Homology CDS 4491569 4492892 . - 0 ID=cds-LU631_RS23450;Parent=gene-LU631_RS23450;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS23450;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4492977 4493138 . + . ID=gene-LU631_RS23455;Name=LU631_RS23455;end_range=4493138,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS23455;old_locus_tag=LU631_23455;partial=true;pseudo=true;start_range=.,4492977 NZ_CP089940.1 Protein Homology CDS 4492977 4493138 . + 0 ID=cds-LU631_RS23455;Parent=gene-LU631_RS23455;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4493138,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001744774.1;locus_tag=LU631_RS23455;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,4492977;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4493145 4493361 . - . ID=gene-LU631_RS23460;Name=LU631_RS23460;end_range=4493361,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS23460;old_locus_tag=LU631_23460;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4493145 4493361 . - 0 ID=cds-LU631_RS23460;Parent=gene-LU631_RS23460;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=4493361,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=LU631_RS23460;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4493433 4493668 . - . ID=gene-LU631_RS23465;Name=LU631_RS23465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS23465;old_locus_tag=LU631_23465;pseudo=true NZ_CP089940.1 Protein Homology CDS 4493433 4493668 . - 0 ID=cds-LU631_RS23465;Parent=gene-LU631_RS23465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004796.1;locus_tag=LU631_RS23465;product=RAQPRD family integrative conjugative element protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4493893 4494288 . + . ID=gene-LU631_RS23470;Name=LU631_RS23470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23470;old_locus_tag=LU631_23470 NZ_CP089940.1 Protein Homology CDS 4493893 4494288 . + 0 ID=cds-WP_016190775.1;Parent=gene-LU631_RS23470;Dbxref=Genbank:WP_016190775.1;Name=WP_016190775.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017454.2;locus_tag=LU631_RS23470;product=type VI secretion system tube protein Hcp;protein_id=WP_016190775.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4494954 4504103 . - . ID=gene-LU631_RS23475;Name=LU631_RS23475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23475;old_locus_tag=LU631_23475 NZ_CP089940.1 Protein Homology CDS 4494954 4504103 . - 0 ID=cds-WP_046372078.1;Parent=gene-LU631_RS23475;Dbxref=Genbank:WP_046372078.1;Name=WP_046372078.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024728.2;locus_tag=LU631_RS23475;product=hemagglutinin repeat-containing protein;protein_id=WP_046372078.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4504126 4505868 . - . ID=gene-LU631_RS23480;Name=LU631_RS23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23480;old_locus_tag=LU631_23480 NZ_CP089940.1 Protein Homology CDS 4504126 4505868 . - 0 ID=cds-WP_052734711.1;Parent=gene-LU631_RS23480;Dbxref=Genbank:WP_052734711.1;Name=WP_052734711.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015803.2;locus_tag=LU631_RS23480;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_052734711.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4505887 4506858 . - . ID=gene-LU631_RS23485;Name=LU631_RS23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23485;old_locus_tag=LU631_23485 NZ_CP089940.1 Protein Homology CDS 4505887 4506858 . - 0 ID=cds-WP_233481950.1;Parent=gene-LU631_RS23485;Dbxref=Genbank:WP_233481950.1;Name=WP_233481950.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.2;locus_tag=LU631_RS23485;product=fimbrial protein;protein_id=WP_233481950.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4506872 4509442 . - . ID=gene-LU631_RS23490;Name=LU631_RS23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23490;old_locus_tag=LU631_23490 NZ_CP089940.1 Protein Homology CDS 4506872 4509442 . - 0 ID=cds-WP_152664210.1;Parent=gene-LU631_RS23490;Dbxref=Genbank:WP_152664210.1;Name=WP_152664210.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012786.2;locus_tag=LU631_RS23490;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_152664210.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4509456 4510175 . - . ID=gene-LU631_RS23495;Name=LU631_RS23495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23495;old_locus_tag=LU631_23495 NZ_CP089940.1 Protein Homology CDS 4509456 4510175 . - 0 ID=cds-WP_040465533.1;Parent=gene-LU631_RS23495;Dbxref=Genbank:WP_040465533.1;Name=WP_040465533.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012565.2;locus_tag=LU631_RS23495;product=molecular chaperone;protein_id=WP_040465533.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4510303 4510884 . - . ID=gene-LU631_RS23500;Name=LU631_RS23500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23500;old_locus_tag=LU631_23500 NZ_CP089940.1 Protein Homology CDS 4510303 4510884 . - 0 ID=cds-WP_016190768.1;Parent=gene-LU631_RS23500;Dbxref=Genbank:WP_016190768.1;Name=WP_016190768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499738.1;locus_tag=LU631_RS23500;product=fimbrial protein;protein_id=WP_016190768.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4511358 4511807 . + . ID=gene-LU631_RS23505;Name=LU631_RS23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23505;old_locus_tag=LU631_23505 NZ_CP089940.1 Protein Homology CDS 4511358 4511807 . + 0 ID=cds-WP_016190767.1;Parent=gene-LU631_RS23505;Dbxref=Genbank:WP_016190767.1;Name=WP_016190767.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012698.2;locus_tag=LU631_RS23505;product=winged helix-turn-helix domain-containing protein;protein_id=WP_016190767.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4512381 4512456 . - . ID=gene-LU631_RS23510;Name=LU631_RS23510;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS23510;old_locus_tag=LU631_23510 NZ_CP089940.1 tRNAscan-SE tRNA 4512381 4512456 . - . ID=rna-LU631_RS23510;Parent=gene-LU631_RS23510;anticodon=(pos:complement(4512421..4512423));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS23510;product=tRNA-Gly NZ_CP089940.1 tRNAscan-SE exon 4512381 4512456 . - . ID=exon-LU631_RS23510-1;Parent=rna-LU631_RS23510;anticodon=(pos:complement(4512421..4512423));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS23510;product=tRNA-Gly NZ_CP089940.1 RefSeq gene 4512630 4513175 . - . ID=gene-LU631_RS23515;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=LU631_RS23515;old_locus_tag=LU631_23515 NZ_CP089940.1 Protein Homology CDS 4512630 4513175 . - 0 ID=cds-WP_016190766.1;Parent=gene-LU631_RS23515;Dbxref=Genbank:WP_016190766.1;Name=WP_016190766.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453388.1;locus_tag=LU631_RS23515;product=oligoribonuclease;protein_id=WP_016190766.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4513272 4514333 . + . ID=gene-LU631_RS23520;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=LU631_RS23520;old_locus_tag=LU631_23520 NZ_CP089940.1 Protein Homology CDS 4513272 4514333 . + 0 ID=cds-WP_016190765.1;Parent=gene-LU631_RS23520;Dbxref=Genbank:WP_016190765.1;Name=WP_016190765.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160160.1;locus_tag=LU631_RS23520;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_016190765.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4514440 4515339 . + . ID=gene-LU631_RS23525;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=LU631_RS23525;old_locus_tag=LU631_23525 NZ_CP089940.1 Protein Homology CDS 4514440 4515339 . + 0 ID=cds-WP_016190764.1;Parent=gene-LU631_RS23525;Dbxref=Genbank:WP_016190764.1;Name=WP_016190764.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010615830.1;locus_tag=LU631_RS23525;product=archaetidylserine decarboxylase;protein_id=WP_016190764.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4515350 4518685 . + . ID=gene-LU631_RS23530;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=LU631_RS23530;old_locus_tag=LU631_23530 NZ_CP089940.1 Protein Homology CDS 4515350 4518685 . + 0 ID=cds-WP_040465560.1;Parent=gene-LU631_RS23530;Dbxref=Genbank:WP_040465560.1;Name=WP_040465560.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160165.1;locus_tag=LU631_RS23530;product=miniconductance mechanosensitive channel MscM;protein_id=WP_040465560.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4518731 4519708 . - . ID=gene-LU631_RS23535;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=LU631_RS23535;old_locus_tag=LU631_23535 NZ_CP089940.1 Protein Homology CDS 4518731 4519708 . - 0 ID=cds-WP_016190762.1;Parent=gene-LU631_RS23535;Dbxref=Genbank:WP_016190762.1;Name=WP_016190762.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666852.1;locus_tag=LU631_RS23535;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_016190762.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4519981 4521765 . + . ID=gene-LU631_RS23540;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=LU631_RS23540;old_locus_tag=LU631_23540 NZ_CP089940.1 Protein Homology CDS 4519981 4521765 . + 0 ID=cds-WP_016190761.1;Parent=gene-LU631_RS23540;Dbxref=Genbank:WP_016190761.1;Name=WP_016190761.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200477.1;locus_tag=LU631_RS23540;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_016190761.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4521758 4522492 . + . ID=gene-LU631_RS23545;Name=LU631_RS23545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23545;old_locus_tag=LU631_23545 NZ_CP089940.1 Protein Homology CDS 4521758 4522492 . + 0 ID=cds-WP_016190760.1;Parent=gene-LU631_RS23545;Dbxref=Genbank:WP_016190760.1;Name=WP_016190760.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=LU631_RS23545;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=WP_016190760.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4522504 4522908 . + . ID=gene-LU631_RS23550;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=LU631_RS23550;old_locus_tag=LU631_23550 NZ_CP089940.1 Protein Homology CDS 4522504 4522908 . + 0 ID=cds-WP_016190759.1;Parent=gene-LU631_RS23550;Dbxref=Genbank:WP_016190759.1;Name=WP_016190759.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200475.1;locus_tag=LU631_RS23550;product=fumarate reductase subunit FrdC;protein_id=WP_016190759.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4522905 4523258 . + . ID=gene-LU631_RS23555;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=LU631_RS23555;old_locus_tag=LU631_23555 NZ_CP089940.1 Protein Homology CDS 4522905 4523258 . + 0 ID=cds-WP_016190758.1;Parent=gene-LU631_RS23555;Dbxref=Genbank:WP_016190758.1;Name=WP_016190758.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001601300.1;locus_tag=LU631_RS23555;product=fumarate reductase subunit FrdD;protein_id=WP_016190758.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4523333 4523857 . + . ID=gene-LU631_RS23560;Name=blc;gbkey=Gene;gene=blc;gene_biotype=protein_coding;locus_tag=LU631_RS23560;old_locus_tag=LU631_23560 NZ_CP089940.1 Protein Homology CDS 4523333 4523857 . + 0 ID=cds-WP_016190757.1;Parent=gene-LU631_RS23560;Dbxref=Genbank:WP_016190757.1;Name=WP_016190757.1;gbkey=CDS;gene=blc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666851.1;locus_tag=LU631_RS23560;product=outer membrane lipoprotein Blc;protein_id=WP_016190757.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4524170 4524304 . - . ID=gene-LU631_RS23565;Name=LU631_RS23565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS23565;old_locus_tag=LU631_23565;pseudo=true NZ_CP089940.1 Protein Homology CDS 4524170 4524304 . - 0 ID=cds-LU631_RS23565;Parent=gene-LU631_RS23565;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453399.1;locus_tag=LU631_RS23565;product=ECN family pore-forming entericidin;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4524409 4524534 . - . ID=gene-LU631_RS23570;Name=LU631_RS23570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23570;old_locus_tag=LU631_23570 NZ_CP089940.1 Protein Homology CDS 4524409 4524534 . - 0 ID=cds-WP_152664281.1;Parent=gene-LU631_RS23570;Dbxref=Genbank:WP_152664281.1;Name=WP_152664281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010279129.1;locus_tag=LU631_RS23570;product=entericidin;protein_id=WP_152664281.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4524593 4525159 . - . ID=gene-LU631_RS23575;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=LU631_RS23575;old_locus_tag=LU631_23575 NZ_CP089940.1 Protein Homology CDS 4524593 4525159 . - 0 ID=cds-WP_016190755.1;Parent=gene-LU631_RS23575;Dbxref=Genbank:WP_016190755.1;Name=WP_016190755.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=LU631_RS23575;product=elongation factor P;protein_id=WP_016190755.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4525202 4526230 . + . ID=gene-LU631_RS23580;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=LU631_RS23580;old_locus_tag=LU631_23580 NZ_CP089940.1 Protein Homology CDS 4525202 4526230 . + 0 ID=cds-WP_016190754.1;Parent=gene-LU631_RS23580;Dbxref=Genbank:WP_016190754.1;Name=WP_016190754.1;Ontology_term=GO:0072581;gbkey=CDS;gene=epmB;go_process=protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine|0072581||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200469.1;locus_tag=LU631_RS23580;product=EF-P beta-lysylation protein EpmB;protein_id=WP_016190754.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4526608 4526958 . - . ID=gene-LU631_RS23585;Name=LU631_RS23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23585;old_locus_tag=LU631_23585 NZ_CP089940.1 Protein Homology CDS 4526608 4526958 . - 0 ID=cds-WP_016190753.1;Parent=gene-LU631_RS23585;Dbxref=Genbank:WP_016190753.1;Name=WP_016190753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014538509.1;locus_tag=LU631_RS23585;product=DUF4156 domain-containing protein;protein_id=WP_016190753.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4527147 4528802 . - . ID=gene-LU631_RS23590;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=LU631_RS23590;old_locus_tag=LU631_23590 NZ_CP089940.1 Protein Homology CDS 4527147 4528802 . - 0 ID=cds-WP_016190752.1;Parent=gene-LU631_RS23590;Dbxref=Genbank:WP_016190752.1;Name=WP_016190752.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010427772.1;locus_tag=LU631_RS23590;product=chaperonin GroEL;protein_id=WP_016190752.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4528848 4529141 . - . ID=gene-LU631_RS23595;Name=LU631_RS23595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23595;old_locus_tag=LU631_23595 NZ_CP089940.1 Protein Homology CDS 4528848 4529141 . - 0 ID=cds-WP_016190751.1;Parent=gene-LU631_RS23595;Dbxref=Genbank:WP_016190751.1;Name=WP_016190751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391824.1;locus_tag=LU631_RS23595;product=co-chaperone GroES;protein_id=WP_016190751.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4529355 4529810 . - . ID=gene-LU631_RS23600;Name=LU631_RS23600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23600;old_locus_tag=LU631_23600 NZ_CP089940.1 Protein Homology CDS 4529355 4529810 . - 0 ID=cds-WP_016190750.1;Parent=gene-LU631_RS23600;Dbxref=Genbank:WP_016190750.1;Name=WP_016190750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017801135.1;locus_tag=LU631_RS23600;product=FxsA family protein;protein_id=WP_016190750.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4530156 4530418 . + . ID=gene-LU631_RS23605;Name=LU631_RS23605;end_range=4530418,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS23605;old_locus_tag=LU631_23605;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4530156 4530418 . + 0 ID=cds-LU631_RS23605;Parent=gene-LU631_RS23605;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4530418,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313147.2;locus_tag=LU631_RS23605;partial=true;product=lyase family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4530660 4531961 . + . ID=gene-LU631_RS23610;Name=LU631_RS23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23610;old_locus_tag=LU631_23610 NZ_CP089940.1 Protein Homology CDS 4530660 4531961 . + 0 ID=cds-WP_016190748.1;Parent=gene-LU631_RS23610;Dbxref=Genbank:WP_016190748.1;Name=WP_016190748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961959.1;locus_tag=LU631_RS23610;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_016190748.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4532156 4533844 . + . ID=gene-LU631_RS23615;Name=LU631_RS23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23615;old_locus_tag=LU631_23615 NZ_CP089940.1 Protein Homology CDS 4532156 4533844 . + 0 ID=cds-WP_232426863.1;Parent=gene-LU631_RS23615;Dbxref=Genbank:WP_232426863.1;Name=WP_232426863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017347390.1;locus_tag=LU631_RS23615;product=protein-disulfide reductase DsbD;protein_id=WP_232426863.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4533896 4534379 . + . ID=gene-LU631_RS23620;Name=LU631_RS23620;end_range=4534379,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS23620;old_locus_tag=LU631_23620;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4533896 4534379 . + 0 ID=cds-LU631_RS23620;Parent=gene-LU631_RS23620;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4534379,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160193.1;locus_tag=LU631_RS23620;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4534413 4534568 . + . ID=gene-LU631_RS23625;Name=LU631_RS23625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23625;old_locus_tag=LU631_23625 NZ_CP089940.1 GeneMarkS-2+ CDS 4534413 4534568 . + 0 ID=cds-WP_232426853.1;Parent=gene-LU631_RS23625;Dbxref=Genbank:WP_232426853.1;Name=WP_232426853.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS23625;product=hypothetical protein;protein_id=WP_232426853.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4535149 4536323 . - . ID=gene-LU631_RS23630;Name=LU631_RS23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23630;old_locus_tag=LU631_23630 NZ_CP089940.1 Protein Homology CDS 4536056 4536323 . - 0 ID=cds-WP_233481951.1;Parent=gene-LU631_RS23630;Dbxref=Genbank:WP_233481951.1;Name=WP_233481951.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611429.1;locus_tag=LU631_RS23630;product=IS3 family transposase;protein_id=WP_233481951.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 4535149 4536056 . - 2 ID=cds-WP_233481951.1;Parent=gene-LU631_RS23630;Dbxref=Genbank:WP_233481951.1;Name=WP_233481951.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611429.1;locus_tag=LU631_RS23630;product=IS3 family transposase;protein_id=WP_233481951.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4536495 4537192 . + . ID=gene-LU631_RS23635;Name=LU631_RS23635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23635;old_locus_tag=LU631_23635 NZ_CP089940.1 Protein Homology CDS 4536495 4536744 . + 0 ID=cds-WP_233481952.1;Parent=gene-LU631_RS23635;Dbxref=Genbank:WP_233481952.1;Name=WP_233481952.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS23635;product=IS1 family transposase;protein_id=WP_233481952.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 4536744 4537192 . + 2 ID=cds-WP_233481952.1;Parent=gene-LU631_RS23635;Dbxref=Genbank:WP_233481952.1;Name=WP_233481952.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS23635;product=IS1 family transposase;protein_id=WP_233481952.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4537186 4537979 . - . ID=gene-LU631_RS23640;Name=LU631_RS23640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS23640;old_locus_tag=LU631_23640;pseudo=true NZ_CP089940.1 Protein Homology CDS 4537186 4537979 . - 0 ID=cds-LU631_RS23640;Parent=gene-LU631_RS23640;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS23640;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4538817 4539101 . - . ID=gene-LU631_RS23645;Name=LU631_RS23645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23645;old_locus_tag=LU631_23645 NZ_CP089940.1 Protein Homology CDS 4538817 4539101 . - 0 ID=cds-WP_232426852.1;Parent=gene-LU631_RS23645;Dbxref=Genbank:WP_232426852.1;Name=WP_232426852.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017315.2;locus_tag=LU631_RS23645;product=PAAR domain-containing protein;protein_id=WP_232426852.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4539429 4539504 . + . ID=gene-LU631_RS23650;Name=LU631_RS23650;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS23650;old_locus_tag=LU631_23650 NZ_CP089940.1 tRNAscan-SE tRNA 4539429 4539504 . + . ID=rna-LU631_RS23650;Parent=gene-LU631_RS23650;anticodon=(pos:4539462..4539464);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS23650;product=tRNA-Phe NZ_CP089940.1 tRNAscan-SE exon 4539429 4539504 . + . ID=exon-LU631_RS23650-1;Parent=rna-LU631_RS23650;anticodon=(pos:4539462..4539464);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS23650;product=tRNA-Phe NZ_CP089940.1 RefSeq gene 4539702 4540712 . - . ID=gene-LU631_RS23655;Name=LU631_RS23655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23655;old_locus_tag=LU631_23655 NZ_CP089940.1 Protein Homology CDS 4539702 4540712 . - 0 ID=cds-WP_016190741.1;Parent=gene-LU631_RS23655;Dbxref=Genbank:WP_016190741.1;Name=WP_016190741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869818.1;locus_tag=LU631_RS23655;product=site-specific integrase;protein_id=WP_016190741.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4540773 4542362 . - . ID=gene-LU631_RS23660;Name=LU631_RS23660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23660;old_locus_tag=LU631_23660 NZ_CP089940.1 Protein Homology CDS 4540773 4542362 . - 0 ID=cds-WP_016190740.1;Parent=gene-LU631_RS23660;Dbxref=Genbank:WP_016190740.1;Name=WP_016190740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192015.1;locus_tag=LU631_RS23660;product=TraI domain-containing protein;protein_id=WP_016190740.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4542356 4543840 . - . ID=gene-LU631_RS23665;Name=LU631_RS23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23665;old_locus_tag=LU631_23665 NZ_CP089940.1 Protein Homology CDS 4542356 4543840 . - 0 ID=cds-WP_016190739.1;Parent=gene-LU631_RS23665;Dbxref=Genbank:WP_016190739.1;Name=WP_016190739.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869816.1;locus_tag=LU631_RS23665;product=UvrD-helicase domain-containing protein;protein_id=WP_016190739.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4544023 4544322 . + . ID=gene-LU631_RS23670;Name=LU631_RS23670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23670;old_locus_tag=LU631_23670 NZ_CP089940.1 Protein Homology CDS 4544023 4544322 . + 0 ID=cds-WP_016190738.1;Parent=gene-LU631_RS23670;Dbxref=Genbank:WP_016190738.1;Name=WP_016190738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001402879.1;locus_tag=LU631_RS23670;product=hypothetical protein;protein_id=WP_016190738.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4544466 4544870 . + . ID=gene-LU631_RS23675;Name=LU631_RS23675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23675;old_locus_tag=LU631_23675 NZ_CP089940.1 Protein Homology CDS 4544466 4544870 . + 0 ID=cds-WP_071598904.1;Parent=gene-LU631_RS23675;Dbxref=Genbank:WP_071598904.1;Name=WP_071598904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000056335.1;locus_tag=LU631_RS23675;product=hypothetical protein;protein_id=WP_071598904.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4545080 4546288 . + . ID=gene-LU631_RS23680;Name=LU631_RS23680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23680;old_locus_tag=LU631_23680 NZ_CP089940.1 Protein Homology CDS 4545080 4546288 . + 0 ID=cds-WP_046371917.1-5;Parent=gene-LU631_RS23680;Dbxref=Genbank:WP_046371917.1;Name=WP_046371917.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS23680;product=IS256 family transposase;protein_id=WP_046371917.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4546393 4547088 . - . ID=gene-LU631_RS23685;Name=LU631_RS23685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23685;old_locus_tag=LU631_23685 NZ_CP089940.1 Protein Homology CDS 4546393 4547088 . - 0 ID=cds-WP_016190736.1;Parent=gene-LU631_RS23685;Dbxref=Genbank:WP_016190736.1;Name=WP_016190736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001121871.1;locus_tag=LU631_RS23685;product=hypothetical protein;protein_id=WP_016190736.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4547262 4547945 . - . ID=gene-LU631_RS23690;Name=LU631_RS23690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23690;old_locus_tag=LU631_23690 NZ_CP089940.1 Protein Homology CDS 4547262 4547945 . - 0 ID=cds-WP_040465530.1;Parent=gene-LU631_RS23690;Dbxref=Genbank:WP_040465530.1;Name=WP_040465530.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869813.1;locus_tag=LU631_RS23690;product=N-6 DNA methylase;protein_id=WP_040465530.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4548062 4548997 . - . ID=gene-LU631_RS23695;Name=LU631_RS23695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23695;old_locus_tag=LU631_23695 NZ_CP089940.1 Protein Homology CDS 4548062 4548997 . - 0 ID=cds-WP_016190734.1;Parent=gene-LU631_RS23695;Dbxref=Genbank:WP_016190734.1;Name=WP_016190734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190734.1;locus_tag=LU631_RS23695;product=DUF1281 domain-containing protein;protein_id=WP_016190734.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4549105 4550163 . - . ID=gene-LU631_RS23700;Name=LU631_RS23700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23700;old_locus_tag=LU631_23700 NZ_CP089940.1 Protein Homology CDS 4549105 4550163 . - 0 ID=cds-WP_016190733.1;Parent=gene-LU631_RS23700;Dbxref=Genbank:WP_016190733.1;Name=WP_016190733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869811.1;locus_tag=LU631_RS23700;product=zincin-like metallopeptidase domain-containing protein;protein_id=WP_016190733.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4550236 4550850 . - . ID=gene-LU631_RS23705;Name=LU631_RS23705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23705;old_locus_tag=LU631_23705 NZ_CP089940.1 GeneMarkS-2+ CDS 4550236 4550850 . - 0 ID=cds-WP_040465529.1;Parent=gene-LU631_RS23705;Dbxref=Genbank:WP_040465529.1;Name=WP_040465529.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS23705;product=hypothetical protein;protein_id=WP_040465529.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4550958 4551956 . - . ID=gene-LU631_RS23710;Name=LU631_RS23710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23710;old_locus_tag=LU631_23710 NZ_CP089940.1 GeneMarkS-2+ CDS 4550958 4551956 . - 0 ID=cds-WP_016190732.1;Parent=gene-LU631_RS23710;Dbxref=Genbank:WP_016190732.1;Name=WP_016190732.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS23710;product=hypothetical protein;protein_id=WP_016190732.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4552094 4552432 . - . ID=gene-LU631_RS23715;Name=LU631_RS23715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23715;old_locus_tag=LU631_23715 NZ_CP089940.1 Protein Homology CDS 4552094 4552432 . - 0 ID=cds-WP_016190731.1;Parent=gene-LU631_RS23715;Dbxref=Genbank:WP_016190731.1;Name=WP_016190731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060288.1;locus_tag=LU631_RS23715;product=hypothetical protein;protein_id=WP_016190731.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4552840 4553262 . - . ID=gene-LU631_RS23720;Name=LU631_RS23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23720;old_locus_tag=LU631_23720 NZ_CP089940.1 Protein Homology CDS 4552840 4553262 . - 0 ID=cds-WP_015869809.1;Parent=gene-LU631_RS23720;Dbxref=Genbank:WP_015869809.1;Name=WP_015869809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869809.1;locus_tag=LU631_RS23720;product=hypothetical protein;protein_id=WP_015869809.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4553283 4554206 . - . ID=gene-LU631_RS23725;Name=LU631_RS23725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23725;old_locus_tag=LU631_23725 NZ_CP089940.1 Protein Homology CDS 4553283 4554206 . - 0 ID=cds-WP_016190730.1;Parent=gene-LU631_RS23725;Dbxref=Genbank:WP_016190730.1;Name=WP_016190730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846572.1;locus_tag=LU631_RS23725;product=integrase domain-containing protein;protein_id=WP_016190730.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4555227 4555928 . - . ID=gene-LU631_RS23730;Name=LU631_RS23730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23730;old_locus_tag=LU631_23730 NZ_CP089940.1 Protein Homology CDS 4555227 4555928 . - 0 ID=cds-WP_016190729.1;Parent=gene-LU631_RS23730;Dbxref=Genbank:WP_016190729.1;Name=WP_016190729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869807.1;locus_tag=LU631_RS23730;product=YkgJ family cysteine cluster protein;protein_id=WP_016190729.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4556119 4556622 . - . ID=gene-LU631_RS23735;Name=LU631_RS23735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23735;old_locus_tag=LU631_23735 NZ_CP089940.1 GeneMarkS-2+ CDS 4556119 4556622 . - 0 ID=cds-WP_016190728.1;Parent=gene-LU631_RS23735;Dbxref=Genbank:WP_016190728.1;Name=WP_016190728.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS23735;product=hypothetical protein;protein_id=WP_016190728.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4556770 4556949 . + . ID=gene-LU631_RS23740;Name=LU631_RS23740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23740;old_locus_tag=LU631_23740 NZ_CP089940.1 GeneMarkS-2+ CDS 4556770 4556949 . + 0 ID=cds-WP_016190727.1;Parent=gene-LU631_RS23740;Dbxref=Genbank:WP_016190727.1;Name=WP_016190727.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS23740;product=hypothetical protein;protein_id=WP_016190727.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4556984 4558525 . - . ID=gene-LU631_RS23745;Name=LU631_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23745;old_locus_tag=LU631_23745 NZ_CP089940.1 Protein Homology CDS 4556984 4558525 . - 0 ID=cds-WP_016190726.1;Parent=gene-LU631_RS23745;Dbxref=Genbank:WP_016190726.1;Name=WP_016190726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001433618.1;locus_tag=LU631_RS23745;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=WP_016190726.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4558532 4558885 . - . ID=gene-LU631_RS23750;Name=LU631_RS23750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23750;old_locus_tag=LU631_23750 NZ_CP089940.1 Protein Homology CDS 4558532 4558885 . - 0 ID=cds-WP_040465557.1;Parent=gene-LU631_RS23750;Dbxref=Genbank:WP_040465557.1;Name=WP_040465557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869803.1;locus_tag=LU631_RS23750;product=hypothetical protein;protein_id=WP_040465557.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4558899 4560332 . - . ID=gene-LU631_RS23755;Name=LU631_RS23755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23755;old_locus_tag=LU631_23755 NZ_CP089940.1 Protein Homology CDS 4558899 4560332 . - 0 ID=cds-WP_016190724.1;Parent=gene-LU631_RS23755;Dbxref=Genbank:WP_016190724.1;Name=WP_016190724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681776.1;locus_tag=LU631_RS23755;product=integrating conjugative element protein;protein_id=WP_016190724.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4560344 4561336 . - . ID=gene-LU631_RS23760;Name=LU631_RS23760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23760;old_locus_tag=LU631_23760 NZ_CP089940.1 Protein Homology CDS 4560344 4561336 . - 0 ID=cds-WP_016190723.1;Parent=gene-LU631_RS23760;Dbxref=Genbank:WP_016190723.1;Name=WP_016190723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190723.1;locus_tag=LU631_RS23760;product=TIGR03756 family integrating conjugative element protein;protein_id=WP_016190723.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4561333 4561734 . - . ID=gene-LU631_RS23765;Name=LU631_RS23765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23765;old_locus_tag=LU631_23765 NZ_CP089940.1 Protein Homology CDS 4561333 4561734 . - 0 ID=cds-WP_016190722.1;Parent=gene-LU631_RS23765;Dbxref=Genbank:WP_016190722.1;Name=WP_016190722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115523.1;locus_tag=LU631_RS23765;product=TIGR03757 family integrating conjugative element protein;protein_id=WP_016190722.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4562053 4565853 . - . ID=gene-LU631_RS23770;Name=LU631_RS23770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23770;old_locus_tag=LU631_23770 NZ_CP089940.1 Protein Homology CDS 4562053 4565853 . - 0 ID=cds-WP_016190721.1;Parent=gene-LU631_RS23770;Dbxref=Genbank:WP_016190721.1;Name=WP_016190721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078153.1;locus_tag=LU631_RS23770;product=DNA-binding protein;protein_id=WP_016190721.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4565981 4566364 . - . ID=gene-LU631_RS23775;Name=LU631_RS23775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23775;old_locus_tag=LU631_23775 NZ_CP089940.1 Protein Homology CDS 4565981 4566364 . - 0 ID=cds-WP_016190720.1;Parent=gene-LU631_RS23775;Dbxref=Genbank:WP_016190720.1;Name=WP_016190720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004805.1;locus_tag=LU631_RS23775;product=hypothetical protein;protein_id=WP_016190720.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4566361 4569180 . - . ID=gene-LU631_RS23780;Name=LU631_RS23780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23780;old_locus_tag=LU631_23780 NZ_CP089940.1 Protein Homology CDS 4566361 4569180 . - 0 ID=cds-WP_232426862.1;Parent=gene-LU631_RS23780;Dbxref=Genbank:WP_232426862.1;Name=WP_232426862.1;Ontology_term=GO:0008150,GO:0005524,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=ATP binding|0005524||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869795.1;locus_tag=LU631_RS23780;product=conjugative transfer ATPase;protein_id=WP_232426862.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4569225 4569638 . - . ID=gene-LU631_RS23785;Name=LU631_RS23785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23785;old_locus_tag=LU631_23785 NZ_CP089940.1 Protein Homology CDS 4569225 4569638 . - 0 ID=cds-WP_016190718.1;Parent=gene-LU631_RS23785;Dbxref=Genbank:WP_016190718.1;Name=WP_016190718.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000825933.1;locus_tag=LU631_RS23785;product=TIGR03751 family conjugal transfer lipoprotein;protein_id=WP_016190718.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4569650 4571155 . - . ID=gene-LU631_RS23790;Name=LU631_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23790;old_locus_tag=LU631_23790 NZ_CP089940.1 Protein Homology CDS 4569650 4571155 . - 0 ID=cds-WP_016190717.1;Parent=gene-LU631_RS23790;Dbxref=Genbank:WP_016190717.1;Name=WP_016190717.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808257.1;locus_tag=LU631_RS23790;product=TIGR03752 family integrating conjugative element protein;protein_id=WP_016190717.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4571145 4572068 . - . ID=gene-LU631_RS23795;Name=LU631_RS23795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23795;old_locus_tag=LU631_23795 NZ_CP089940.1 Protein Homology CDS 4571145 4572068 . - 0 ID=cds-WP_016190716.1;Parent=gene-LU631_RS23795;Dbxref=Genbank:WP_016190716.1;Name=WP_016190716.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869792.1;locus_tag=LU631_RS23795;product=TIGR03749 family integrating conjugative element protein;protein_id=WP_016190716.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4572068 4572727 . - . ID=gene-LU631_RS23800;Name=LU631_RS23800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23800;old_locus_tag=LU631_23800 NZ_CP089940.1 Protein Homology CDS 4572068 4572727 . - 0 ID=cds-WP_016190715.1;Parent=gene-LU631_RS23800;Dbxref=Genbank:WP_016190715.1;Name=WP_016190715.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808259.1;locus_tag=LU631_RS23800;product=TIGR03746 family integrating conjugative element protein;protein_id=WP_016190715.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4572724 4573080 . - . ID=gene-LU631_RS23805;Name=LU631_RS23805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23805;old_locus_tag=LU631_23805 NZ_CP089940.1 Protein Homology CDS 4572724 4573080 . - 0 ID=cds-WP_016190714.1;Parent=gene-LU631_RS23805;Dbxref=Genbank:WP_016190714.1;Name=WP_016190714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190714.1;locus_tag=LU631_RS23805;product=TIGR03750 family conjugal transfer protein;protein_id=WP_016190714.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4573090 4573476 . - . ID=gene-LU631_RS23810;Name=LU631_RS23810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23810;old_locus_tag=LU631_23810 NZ_CP089940.1 Protein Homology CDS 4573090 4573476 . - 0 ID=cds-WP_016190713.1;Parent=gene-LU631_RS23810;Dbxref=Genbank:WP_016190713.1;Name=WP_016190713.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808260.1;locus_tag=LU631_RS23810;product=TIGR03745 family integrating conjugative element membrane protein;protein_id=WP_016190713.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4573507 4573749 . - . ID=gene-LU631_RS23815;Name=LU631_RS23815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23815;old_locus_tag=LU631_23815 NZ_CP089940.1 Protein Homology CDS 4573507 4573749 . - 0 ID=cds-WP_016190712.1;Parent=gene-LU631_RS23815;Dbxref=Genbank:WP_016190712.1;Name=WP_016190712.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190712.1;locus_tag=LU631_RS23815;product=TIGR03758 family integrating conjugative element protein;protein_id=WP_016190712.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4573749 4574090 . - . ID=gene-LU631_RS23820;Name=LU631_RS23820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23820;old_locus_tag=LU631_23820 NZ_CP089940.1 Protein Homology CDS 4573749 4574090 . - 0 ID=cds-WP_016190711.1;Parent=gene-LU631_RS23820;Dbxref=Genbank:WP_016190711.1;Name=WP_016190711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808261.1;locus_tag=LU631_RS23820;product=RAQPRD family integrative conjugative element protein;protein_id=WP_016190711.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4574428 4575567 . + . ID=gene-LU631_RS23825;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=LU631_RS23825;old_locus_tag=LU631_23825 NZ_CP089940.1 Protein Homology CDS 4574428 4575567 . + 0 ID=cds-WP_016190710.1;Parent=gene-LU631_RS23825;Dbxref=Genbank:WP_016190710.1;Name=WP_016190710.1;Ontology_term=GO:0006304,GO:0003886;gbkey=CDS;gene=dcm;go_function=DNA (cytosine-5-)-methyltransferase activity|0003886||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001021548.1;locus_tag=LU631_RS23825;product=DNA (cytosine-5-)-methyltransferase;protein_id=WP_016190710.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4575560 4576552 . + . ID=gene-LU631_RS23830;Name=LU631_RS23830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23830;old_locus_tag=LU631_23830 NZ_CP089940.1 Protein Homology CDS 4575560 4576552 . + 0 ID=cds-WP_016190709.1;Parent=gene-LU631_RS23830;Dbxref=Genbank:WP_016190709.1;Name=WP_016190709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007777521.1;locus_tag=LU631_RS23830;product=DUF4928 family protein;protein_id=WP_016190709.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4576854 4577612 . - . ID=gene-LU631_RS23835;Name=LU631_RS23835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23835;old_locus_tag=LU631_23835 NZ_CP089940.1 Protein Homology CDS 4576854 4577612 . - 0 ID=cds-WP_016190708.1;Parent=gene-LU631_RS23835;Dbxref=Genbank:WP_016190708.1;Name=WP_016190708.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869785.1;locus_tag=LU631_RS23835;product=TIGR03747 family integrating conjugative element membrane protein;protein_id=WP_016190708.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4577605 4579695 . - . ID=gene-LU631_RS23840;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=LU631_RS23840;old_locus_tag=LU631_23840 NZ_CP089940.1 Protein Homology CDS 4577605 4579695 . - 0 ID=cds-WP_016190707.1;Parent=gene-LU631_RS23840;Dbxref=Genbank:WP_016190707.1;Name=WP_016190707.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001510361.1;locus_tag=LU631_RS23840;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_016190707.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4579688 4580200 . - . ID=gene-LU631_RS23845;Name=LU631_RS23845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23845;old_locus_tag=LU631_23845 NZ_CP089940.1 GeneMarkS-2+ CDS 4579688 4580200 . - 0 ID=cds-WP_016190706.1;Parent=gene-LU631_RS23845;Dbxref=Genbank:WP_016190706.1;Name=WP_016190706.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS23845;product=hypothetical protein;protein_id=WP_016190706.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4580197 4580796 . - . ID=gene-LU631_RS23850;Name=LU631_RS23850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23850;old_locus_tag=LU631_23850 NZ_CP089940.1 Protein Homology CDS 4580197 4580796 . - 0 ID=cds-WP_016190705.1;Parent=gene-LU631_RS23850;Dbxref=Genbank:WP_016190705.1;Name=WP_016190705.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146799.1;locus_tag=LU631_RS23850;product=restriction endonuclease;protein_id=WP_016190705.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4580796 4581308 . - . ID=gene-LU631_RS23855;Name=LU631_RS23855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23855;old_locus_tag=LU631_23855 NZ_CP089940.1 Protein Homology CDS 4580796 4581308 . - 0 ID=cds-WP_016190704.1;Parent=gene-LU631_RS23855;Dbxref=Genbank:WP_016190704.1;Name=WP_016190704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811166.1;locus_tag=LU631_RS23855;product=integrating conjugative element protein;protein_id=WP_016190704.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4581308 4581982 . - . ID=gene-LU631_RS23860;Name=LU631_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23860;old_locus_tag=LU631_23860 NZ_CP089940.1 Protein Homology CDS 4581308 4581982 . - 0 ID=cds-WP_016190703.1;Parent=gene-LU631_RS23860;Dbxref=Genbank:WP_016190703.1;Name=WP_016190703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181871.1;locus_tag=LU631_RS23860;product=transglycosylase SLT domain-containing protein;protein_id=WP_016190703.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4581961 4582665 . - . ID=gene-LU631_RS23865;Name=LU631_RS23865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23865;old_locus_tag=LU631_23865 NZ_CP089940.1 Protein Homology CDS 4581961 4582665 . - 0 ID=cds-WP_016190702.1;Parent=gene-LU631_RS23865;Dbxref=Genbank:WP_016190702.1;Name=WP_016190702.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006785960.1;locus_tag=LU631_RS23865;product=TIGR03759 family integrating conjugative element protein;protein_id=WP_016190702.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4582672 4583394 . - . ID=gene-LU631_RS23870;Name=LU631_RS23870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23870;old_locus_tag=LU631_23870 NZ_CP089940.1 Protein Homology CDS 4582672 4583394 . - 0 ID=cds-WP_016190701.1;Parent=gene-LU631_RS23870;Dbxref=Genbank:WP_016190701.1;Name=WP_016190701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869779.1;locus_tag=LU631_RS23870;product=hypothetical protein;protein_id=WP_016190701.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4583391 4583987 . - . ID=gene-LU631_RS23875;Name=LU631_RS23875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23875;old_locus_tag=LU631_23875 NZ_CP089940.1 Protein Homology CDS 4583391 4583987 . - 0 ID=cds-WP_016190700.1;Parent=gene-LU631_RS23875;Dbxref=Genbank:WP_016190700.1;Name=WP_016190700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190700.1;locus_tag=LU631_RS23875;product=PilL N-terminal domain-containing protein;protein_id=WP_016190700.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4584107 4585429 . - . ID=gene-LU631_RS23880;Name=LU631_RS23880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23880;old_locus_tag=LU631_23880 NZ_CP089940.1 Protein Homology CDS 4584107 4585429 . - 0 ID=cds-WP_046371900.1-6;Parent=gene-LU631_RS23880;Dbxref=Genbank:WP_046371900.1;Name=WP_046371900.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS23880;product=IS4 family transposase;protein_id=WP_046371900.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4585552 4585815 . - . ID=gene-LU631_RS23885;Name=LU631_RS23885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23885;old_locus_tag=LU631_23885 NZ_CP089940.1 Protein Homology CDS 4585552 4585815 . - 0 ID=cds-WP_016190699.1;Parent=gene-LU631_RS23885;Dbxref=Genbank:WP_016190699.1;Name=WP_016190699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869777.1;locus_tag=LU631_RS23885;product=DUF2442 domain-containing protein;protein_id=WP_016190699.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4585796 4586032 . - . ID=gene-LU631_RS23890;Name=LU631_RS23890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23890;old_locus_tag=LU631_23890 NZ_CP089940.1 Protein Homology CDS 4585796 4586032 . - 0 ID=cds-WP_016190698.1;Parent=gene-LU631_RS23890;Dbxref=Genbank:WP_016190698.1;Name=WP_016190698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146806.1;locus_tag=LU631_RS23890;product=DUF4160 domain-containing protein;protein_id=WP_016190698.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4586046 4586606 . - . ID=gene-LU631_RS23895;Name=LU631_RS23895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23895;old_locus_tag=LU631_23895 NZ_CP089940.1 Protein Homology CDS 4586046 4586606 . - 0 ID=cds-WP_016190697.1;Parent=gene-LU631_RS23895;Dbxref=Genbank:WP_016190697.1;Name=WP_016190697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115562.1;locus_tag=LU631_RS23895;product=single-stranded DNA-binding protein;protein_id=WP_016190697.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4586619 4586822 . - . ID=gene-LU631_RS23900;Name=LU631_RS23900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23900;old_locus_tag=LU631_23900 NZ_CP089940.1 Protein Homology CDS 4586619 4586822 . - 0 ID=cds-WP_016190696.1;Parent=gene-LU631_RS23900;Dbxref=Genbank:WP_016190696.1;Name=WP_016190696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869776.1;locus_tag=LU631_RS23900;product=hypothetical protein;protein_id=WP_016190696.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4586900 4587364 . - . ID=gene-LU631_RS23905;Name=LU631_RS23905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23905;old_locus_tag=LU631_23905 NZ_CP089940.1 Protein Homology CDS 4586900 4587364 . - 0 ID=cds-WP_016190695.1;Parent=gene-LU631_RS23905;Dbxref=Genbank:WP_016190695.1;Name=WP_016190695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016151303.1;locus_tag=LU631_RS23905;product=STY4534 family ICE replication protein;protein_id=WP_016190695.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4588014 4590044 . - . ID=gene-LU631_RS23910;Name=LU631_RS23910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23910;old_locus_tag=LU631_23910 NZ_CP089940.1 Protein Homology CDS 4588014 4590044 . - 0 ID=cds-WP_016190694.1;Parent=gene-LU631_RS23910;Dbxref=Genbank:WP_016190694.1;Name=WP_016190694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869774.1;locus_tag=LU631_RS23910;product=DNA topoisomerase III;protein_id=WP_016190694.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4590060 4590815 . - . ID=gene-LU631_RS23915;Name=LU631_RS23915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23915;old_locus_tag=LU631_23915 NZ_CP089940.1 Protein Homology CDS 4590060 4590815 . - 0 ID=cds-WP_016190693.1;Parent=gene-LU631_RS23915;Dbxref=Genbank:WP_016190693.1;Name=WP_016190693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190693.1;locus_tag=LU631_RS23915;product=TIGR03761 family integrating conjugative element protein;protein_id=WP_016190693.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4591097 4592353 . - . ID=gene-LU631_RS23920;Name=LU631_RS23920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23920;old_locus_tag=LU631_23920 NZ_CP089940.1 Protein Homology CDS 4591097 4592353 . - 0 ID=cds-WP_016190692.1;Parent=gene-LU631_RS23920;Dbxref=Genbank:WP_016190692.1;Name=WP_016190692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869771.1;locus_tag=LU631_RS23920;product=STY4528 family pathogenicity island replication protein;protein_id=WP_016190692.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4592444 4592692 . - . ID=gene-LU631_RS23925;Name=LU631_RS23925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23925;old_locus_tag=LU631_23925 NZ_CP089940.1 Protein Homology CDS 4592444 4592692 . - 0 ID=cds-WP_016190691.1;Parent=gene-LU631_RS23925;Dbxref=Genbank:WP_016190691.1;Name=WP_016190691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115572.1;locus_tag=LU631_RS23925;product=hypothetical protein;protein_id=WP_016190691.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4592689 4593291 . - . ID=gene-LU631_RS23930;Name=LU631_RS23930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23930;old_locus_tag=LU631_23930 NZ_CP089940.1 Protein Homology CDS 4592689 4593291 . - 0 ID=cds-WP_016190690.1;Parent=gene-LU631_RS23930;Dbxref=Genbank:WP_016190690.1;Name=WP_016190690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869770.1;locus_tag=LU631_RS23930;product=DUF2857 domain-containing protein;protein_id=WP_016190690.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4593288 4594097 . - . ID=gene-LU631_RS23935;Name=LU631_RS23935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23935;old_locus_tag=LU631_23935 NZ_CP089940.1 Protein Homology CDS 4593288 4594097 . - 0 ID=cds-WP_016190689.1;Parent=gene-LU631_RS23935;Dbxref=Genbank:WP_016190689.1;Name=WP_016190689.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014177.2;locus_tag=LU631_RS23935;product=DNA adenine methylase;protein_id=WP_016190689.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4594081 4595766 . - . ID=gene-LU631_RS23940;Name=LU631_RS23940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23940;old_locus_tag=LU631_23940 NZ_CP089940.1 Protein Homology CDS 4594081 4595766 . - 0 ID=cds-WP_016190688.1;Parent=gene-LU631_RS23940;Dbxref=Genbank:WP_016190688.1;Name=WP_016190688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006777719.1;locus_tag=LU631_RS23940;product=ParB family protein;protein_id=WP_016190688.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4595763 4597133 . - . ID=gene-LU631_RS23945;Name=dnaB-PI;gbkey=Gene;gene=dnaB-PI;gene_biotype=protein_coding;locus_tag=LU631_RS23945;old_locus_tag=LU631_23945 NZ_CP089940.1 Protein Homology CDS 4595763 4597133 . - 0 ID=cds-WP_016190687.1;Parent=gene-LU631_RS23945;Dbxref=Genbank:WP_016190687.1;Name=WP_016190687.1;gbkey=CDS;gene=dnaB-PI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190687.1;locus_tag=LU631_RS23945;product=SPI-7-type island replicative DNA helicase;protein_id=WP_016190687.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4597345 4597746 . + . ID=gene-LU631_RS23950;Name=LU631_RS23950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23950;old_locus_tag=LU631_23950 NZ_CP089940.1 GeneMarkS-2+ CDS 4597345 4597746 . + 0 ID=cds-WP_052734713.1;Parent=gene-LU631_RS23950;Dbxref=Genbank:WP_052734713.1;Name=WP_052734713.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS23950;product=hypothetical protein;protein_id=WP_052734713.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4597920 4598300 . - . ID=gene-LU631_RS23955;Name=LU631_RS23955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23955;old_locus_tag=LU631_23955 NZ_CP089940.1 Protein Homology CDS 4597920 4598300 . - 0 ID=cds-WP_016190685.1;Parent=gene-LU631_RS23955;Dbxref=Genbank:WP_016190685.1;Name=WP_016190685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114272.1;locus_tag=LU631_RS23955;product=hypothetical protein;protein_id=WP_016190685.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4598297 4599169 . - . ID=gene-LU631_RS23960;Name=LU631_RS23960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23960;old_locus_tag=LU631_23960 NZ_CP089940.1 Protein Homology CDS 4598297 4599169 . - 0 ID=cds-WP_016190684.1;Parent=gene-LU631_RS23960;Dbxref=Genbank:WP_016190684.1;Name=WP_016190684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190684.1;locus_tag=LU631_RS23960;product=ParA family protein;protein_id=WP_016190684.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4599474 4600487 . - . ID=gene-LU631_RS23965;Name=LU631_RS23965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23965;old_locus_tag=LU631_23965 NZ_CP089940.1 Protein Homology CDS 4599474 4600487 . - 0 ID=cds-WP_016190683.1;Parent=gene-LU631_RS23965;Dbxref=Genbank:WP_016190683.1;Name=WP_016190683.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190683.1;locus_tag=LU631_RS23965;product=site-specific integrase;protein_id=WP_016190683.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4600718 4602040 . - . ID=gene-LU631_RS23970;Name=LU631_RS23970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23970;old_locus_tag=LU631_23970 NZ_CP089940.1 Protein Homology CDS 4600718 4602040 . - 0 ID=cds-WP_046371900.1-7;Parent=gene-LU631_RS23970;Dbxref=Genbank:WP_046371900.1;Name=WP_046371900.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS23970;product=IS4 family transposase;protein_id=WP_046371900.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4602156 4602470 . - . ID=gene-LU631_RS23975;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=LU631_RS23975;old_locus_tag=LU631_23975 NZ_CP089940.1 Protein Homology CDS 4602156 4602470 . - 0 ID=cds-WP_016190682.1;Parent=gene-LU631_RS23975;Dbxref=Genbank:WP_016190682.1;Name=WP_016190682.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117961.1;locus_tag=LU631_RS23975;product=transcriptional regulator BolA;protein_id=WP_016190682.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4602638 4603216 . + . ID=gene-LU631_RS23980;Name=LU631_RS23980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS23980;old_locus_tag=LU631_23980 NZ_CP089940.1 Protein Homology CDS 4602638 4603216 . + 0 ID=cds-WP_016190681.1;Parent=gene-LU631_RS23980;Dbxref=Genbank:WP_016190681.1;Name=WP_016190681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208646.1;locus_tag=LU631_RS23980;product=lipoprotein;protein_id=WP_016190681.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4603351 4604817 . + . ID=gene-LU631_RS23985;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=LU631_RS23985;old_locus_tag=LU631_23985 NZ_CP089940.1 Protein Homology CDS 4603351 4604817 . + 0 ID=cds-WP_016190680.1;Parent=gene-LU631_RS23985;Dbxref=Genbank:WP_016190680.1;Name=WP_016190680.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800934.1;locus_tag=LU631_RS23985;product=muropeptide MFS transporter AmpG;protein_id=WP_016190680.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4605616 4606542 . + . ID=gene-LU631_RS23990;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=LU631_RS23990;old_locus_tag=LU631_23990 NZ_CP089940.1 Protein Homology CDS 4605616 4606542 . + 0 ID=cds-WP_016190679.1;Parent=gene-LU631_RS23990;Dbxref=Genbank:WP_016190679.1;Name=WP_016190679.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024881.1;locus_tag=LU631_RS23990;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_016190679.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4606547 4608538 . + . ID=gene-LU631_RS23995;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=LU631_RS23995;old_locus_tag=LU631_23995 NZ_CP089940.1 Protein Homology CDS 4606547 4608538 . + 0 ID=cds-WP_016190678.1;Parent=gene-LU631_RS23995;Dbxref=Genbank:WP_016190678.1;Name=WP_016190678.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225433.1;locus_tag=LU631_RS23995;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_016190678.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4608528 4609142 . + . ID=gene-LU631_RS24000;Name=LU631_RS24000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24000;old_locus_tag=LU631_24000 NZ_CP089940.1 Protein Homology CDS 4608528 4609142 . + 0 ID=cds-WP_016190677.1;Parent=gene-LU631_RS24000;Dbxref=Genbank:WP_016190677.1;Name=WP_016190677.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=LU631_RS24000;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_016190677.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4609142 4609471 . + . ID=gene-LU631_RS24005;Name=LU631_RS24005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24005;old_locus_tag=LU631_24005 NZ_CP089940.1 Protein Homology CDS 4609142 4609471 . + 0 ID=cds-WP_016190676.1;Parent=gene-LU631_RS24005;Dbxref=Genbank:WP_016190676.1;Name=WP_016190676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024878.1;locus_tag=LU631_RS24005;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_016190676.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4609486 4610373 . + . ID=gene-LU631_RS24010;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=LU631_RS24010;old_locus_tag=LU631_24010 NZ_CP089940.1 Protein Homology CDS 4609486 4610373 . + 0 ID=cds-WP_016190675.1;Parent=gene-LU631_RS24010;Dbxref=Genbank:WP_016190675.1;Name=WP_016190675.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007705361.1;locus_tag=LU631_RS24010;product=heme o synthase;protein_id=WP_016190675.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4610613 4611974 . + . ID=gene-LU631_RS24015;Name=LU631_RS24015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24015;old_locus_tag=LU631_24015 NZ_CP089940.1 Protein Homology CDS 4610613 4611974 . + 0 ID=cds-WP_016190674.1;Parent=gene-LU631_RS24015;Dbxref=Genbank:WP_016190674.1;Name=WP_016190674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010616827.1;locus_tag=LU631_RS24015;product=MFS transporter;protein_id=WP_016190674.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4612164 4612763 . - . ID=gene-LU631_RS24020;Name=LU631_RS24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24020;old_locus_tag=LU631_24020 NZ_CP089940.1 Protein Homology CDS 4612164 4612763 . - 0 ID=cds-WP_016190673.1;Parent=gene-LU631_RS24020;Dbxref=Genbank:WP_016190673.1;Name=WP_016190673.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=LU631_RS24020;product=LysR substrate-binding domain-containing protein;protein_id=WP_016190673.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4612879 4613469 . + . ID=gene-LU631_RS24025;Name=LU631_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24025;old_locus_tag=LU631_24025 NZ_CP089940.1 Protein Homology CDS 4612879 4613469 . + 0 ID=cds-WP_233481370.1;Parent=gene-LU631_RS24025;Dbxref=Genbank:WP_233481370.1;Name=WP_233481370.1;Ontology_term=GO:0009055,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: protein motif:HMM:NF012402.2;locus_tag=LU631_RS24025;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_233481370.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4613508 4613987 . - . ID=gene-LU631_RS24030;Name=LU631_RS24030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24030;old_locus_tag=LU631_24030 NZ_CP089940.1 Protein Homology CDS 4613508 4613987 . - 0 ID=cds-WP_016190671.1;Parent=gene-LU631_RS24030;Dbxref=Genbank:WP_016190671.1;Name=WP_016190671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012773252.1;locus_tag=LU631_RS24030;product=DUF1543 domain-containing protein;protein_id=WP_016190671.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4614001 4614642 . - . ID=gene-LU631_RS24035;Name=LU631_RS24035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24035;old_locus_tag=LU631_24035 NZ_CP089940.1 Protein Homology CDS 4614001 4614642 . - 0 ID=cds-WP_016190670.1;Parent=gene-LU631_RS24035;Dbxref=Genbank:WP_016190670.1;Name=WP_016190670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017490373.1;locus_tag=LU631_RS24035;product=LysE family translocator;protein_id=WP_016190670.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4614639 4615424 . - . ID=gene-LU631_RS24040;Name=LU631_RS24040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24040;old_locus_tag=LU631_24040 NZ_CP089940.1 Protein Homology CDS 4614639 4615424 . - 0 ID=cds-WP_016190669.1;Parent=gene-LU631_RS24040;Dbxref=Genbank:WP_016190669.1;Name=WP_016190669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017490372.1;locus_tag=LU631_RS24040;product=YqcI/YcgG family protein;protein_id=WP_016190669.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4615539 4616444 . + . ID=gene-LU631_RS24045;Name=LU631_RS24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24045;old_locus_tag=LU631_24045 NZ_CP089940.1 Protein Homology CDS 4615539 4616444 . + 0 ID=cds-WP_016190668.1;Parent=gene-LU631_RS24045;Dbxref=Genbank:WP_016190668.1;Name=WP_016190668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007775722.1;locus_tag=LU631_RS24045;product=LysR substrate-binding domain-containing protein;protein_id=WP_016190668.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4616657 4617967 . + . ID=gene-LU631_RS24050;Name=hutW;gbkey=Gene;gene=hutW;gene_biotype=protein_coding;locus_tag=LU631_RS24050;old_locus_tag=LU631_24050 NZ_CP089940.1 Protein Homology CDS 4616657 4617967 . + 0 ID=cds-WP_016190667.1;Parent=gene-LU631_RS24050;Dbxref=Genbank:WP_016190667.1;Name=WP_016190667.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;gene=hutW;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010295340.1;locus_tag=LU631_RS24050;product=heme anaerobic degradation radical SAM methyltransferase ChuW/HutW;protein_id=WP_016190667.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4617948 4618442 . + . ID=gene-LU631_RS24055;Name=hutX;gbkey=Gene;gene=hutX;gene_biotype=protein_coding;locus_tag=LU631_RS24055;old_locus_tag=LU631_24055 NZ_CP089940.1 Protein Homology CDS 4617948 4618442 . + 0 ID=cds-WP_016190666.1;Parent=gene-LU631_RS24055;Dbxref=Genbank:WP_016190666.1;Name=WP_016190666.1;gbkey=CDS;gene=hutX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014416650.1;locus_tag=LU631_RS24055;product=heme utilization cystosolic carrier protein HutX;protein_id=WP_016190666.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4618442 4619065 . + . ID=gene-LU631_RS24060;Name=LU631_RS24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24060;old_locus_tag=LU631_24060 NZ_CP089940.1 Protein Homology CDS 4618442 4619065 . + 0 ID=cds-WP_016190665.1;Parent=gene-LU631_RS24060;Dbxref=Genbank:WP_016190665.1;Name=WP_016190665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000189352.1;locus_tag=LU631_RS24060;product=NAD(P)H-binding protein;protein_id=WP_016190665.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4619114 4619605 . - . ID=gene-LU631_RS24065;Name=LU631_RS24065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24065;old_locus_tag=LU631_24065 NZ_CP089940.1 Protein Homology CDS 4619114 4619605 . - 0 ID=cds-WP_016190664.1;Parent=gene-LU631_RS24065;Dbxref=Genbank:WP_016190664.1;Name=WP_016190664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225419.1;locus_tag=LU631_RS24065;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_016190664.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4619781 4620701 . + . ID=gene-LU631_RS24070;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=LU631_RS24070;old_locus_tag=LU631_24070 NZ_CP089940.1 Protein Homology CDS 4619781 4620701 . + 0 ID=cds-WP_016190663.1;Parent=gene-LU631_RS24070;Dbxref=Genbank:WP_016190663.1;Name=WP_016190663.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543610.1;locus_tag=LU631_RS24070;product=2-dehydropantoate 2-reductase;protein_id=WP_016190663.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4620661 4621251 . + . ID=gene-LU631_RS24075;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=LU631_RS24075;old_locus_tag=LU631_24075 NZ_CP089940.1 Protein Homology CDS 4620661 4621251 . + 0 ID=cds-WP_016190662.1;Parent=gene-LU631_RS24075;Dbxref=Genbank:WP_016190662.1;Name=WP_016190662.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859085.1;locus_tag=LU631_RS24075;product=protein deglycase YajL;protein_id=WP_016190662.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4621359 4622456 . + . ID=gene-LU631_RS24080;Name=LU631_RS24080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24080;old_locus_tag=LU631_24080 NZ_CP089940.1 Protein Homology CDS 4621359 4622456 . + 0 ID=cds-WP_046372085.1;Parent=gene-LU631_RS24080;Dbxref=Genbank:WP_046372085.1;Name=WP_046372085.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS24080;product=IS256 family transposase;protein_id=WP_046372085.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4622657 4623782 . + . ID=gene-LU631_RS24085;Name=LU631_RS24085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24085;old_locus_tag=LU631_24085;pseudo=true NZ_CP089940.1 Protein Homology CDS 4622657 4623782 . + 0 ID=cds-LU631_RS24085;Parent=gene-LU631_RS24085;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611788.1;locus_tag=LU631_RS24085;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4623846 4624448 . - . ID=gene-LU631_RS24090;Name=LU631_RS24090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24090;old_locus_tag=LU631_24090 NZ_CP089940.1 Protein Homology CDS 4623846 4624448 . - 0 ID=cds-WP_016190660.1;Parent=gene-LU631_RS24090;Dbxref=Genbank:WP_016190660.1;Name=WP_016190660.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=LU631_RS24090;product=peroxiredoxin C;protein_id=WP_016190660.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4624644 4625225 . - . ID=gene-LU631_RS24095;Name=LU631_RS24095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24095;old_locus_tag=LU631_24095 NZ_CP089940.1 Protein Homology CDS 4624644 4625225 . - 0 ID=cds-WP_016190659.1;Parent=gene-LU631_RS24095;Dbxref=Genbank:WP_016190659.1;Name=WP_016190659.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172186.1;locus_tag=LU631_RS24095;product=ACP phosphodiesterase;protein_id=WP_016190659.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4625410 4626480 . + . ID=gene-LU631_RS24100;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=LU631_RS24100;old_locus_tag=LU631_24100 NZ_CP089940.1 Protein Homology CDS 4625410 4626480 . + 0 ID=cds-WP_016190658.1;Parent=gene-LU631_RS24100;Dbxref=Genbank:WP_016190658.1;Name=WP_016190658.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156246.1;locus_tag=LU631_RS24100;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_016190658.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4627012 4628136 . + . ID=gene-LU631_RS24105;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=LU631_RS24105;old_locus_tag=LU631_24105 NZ_CP089940.1 Protein Homology CDS 4627012 4628136 . + 0 ID=cds-WP_016190656.1;Parent=gene-LU631_RS24105;Dbxref=Genbank:WP_016190656.1;Name=WP_016190656.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008103992.1;locus_tag=LU631_RS24105;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_016190656.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4628161 4628499 . + . ID=gene-LU631_RS24110;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=LU631_RS24110;old_locus_tag=LU631_24110 NZ_CP089940.1 Protein Homology CDS 4628161 4628499 . + 0 ID=cds-WP_016190655.1;Parent=gene-LU631_RS24110;Dbxref=Genbank:WP_016190655.1;Name=WP_016190655.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=LU631_RS24110;product=preprotein translocase subunit YajC;protein_id=WP_016190655.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4628526 4630373 . + . ID=gene-LU631_RS24115;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=LU631_RS24115;old_locus_tag=LU631_24115 NZ_CP089940.1 Protein Homology CDS 4628526 4630373 . + 0 ID=cds-WP_016190654.1;Parent=gene-LU631_RS24115;Dbxref=Genbank:WP_016190654.1;Name=WP_016190654.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=LU631_RS24115;product=protein translocase subunit SecD;protein_id=WP_016190654.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4630384 4631352 . + . ID=gene-LU631_RS24120;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=LU631_RS24120;old_locus_tag=LU631_24120 NZ_CP089940.1 Protein Homology CDS 4630384 4631352 . + 0 ID=cds-WP_016190653.1;Parent=gene-LU631_RS24120;Dbxref=Genbank:WP_016190653.1;Name=WP_016190653.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649437.1;locus_tag=LU631_RS24120;product=protein translocase subunit SecF;protein_id=WP_016190653.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4631555 4631866 . + . ID=gene-LU631_RS24125;Name=LU631_RS24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24125;old_locus_tag=LU631_24125 NZ_CP089940.1 Protein Homology CDS 4631555 4631866 . + 0 ID=cds-WP_233481953.1-2;Parent=gene-LU631_RS24125;Dbxref=Genbank:WP_233481953.1;Name=WP_233481953.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022362.2;locus_tag=LU631_RS24125;product=DUF2778 domain-containing protein;protein_id=WP_233481953.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4632469 4633166 . + . ID=gene-LU631_RS24130;Name=LU631_RS24130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24130;old_locus_tag=LU631_24130 NZ_CP089940.1 Protein Homology CDS 4632469 4632730 . + 0 ID=cds-WP_233481954.1;Parent=gene-LU631_RS24130;Dbxref=Genbank:WP_233481954.1;Name=WP_233481954.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS24130;product=IS1 family transposase;protein_id=WP_233481954.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 4632730 4633166 . + 2 ID=cds-WP_233481954.1;Parent=gene-LU631_RS24130;Dbxref=Genbank:WP_233481954.1;Name=WP_233481954.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS24130;product=IS1 family transposase;protein_id=WP_233481954.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4633728 4635647 . + . ID=gene-LU631_RS24135;Name=LU631_RS24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24135;old_locus_tag=LU631_24135 NZ_CP089940.1 Protein Homology CDS 4633728 4635647 . + 0 ID=cds-WP_016193224.1-2;Parent=gene-LU631_RS24135;Dbxref=Genbank:WP_016193224.1;Name=WP_016193224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104563.1;locus_tag=LU631_RS24135;product=type VI secretion system tip protein VgrG;protein_id=WP_016193224.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4635753 4636172 . + . ID=gene-LU631_RS24140;Name=LU631_RS24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24140;old_locus_tag=LU631_24140 NZ_CP089940.1 Protein Homology CDS 4635753 4636172 . + 0 ID=cds-WP_016193226.1-2;Parent=gene-LU631_RS24140;Dbxref=Genbank:WP_016193226.1;Name=WP_016193226.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020366.2;locus_tag=LU631_RS24140;product=DcrB-related protein;protein_id=WP_016193226.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4636222 4641036 . + . ID=gene-LU631_RS24145;Name=LU631_RS24145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24145;old_locus_tag=LU631_24145 NZ_CP089940.1 Protein Homology CDS 4636222 4641036 . + 0 ID=cds-WP_082103781.1;Parent=gene-LU631_RS24145;Dbxref=Genbank:WP_082103781.1;Name=WP_082103781.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025768.2;locus_tag=LU631_RS24145;product=PAAR domain-containing protein;protein_id=WP_082103781.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4641045 4641494 . + . ID=gene-LU631_RS24150;Name=LU631_RS24150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24150;old_locus_tag=LU631_24150 NZ_CP089940.1 Protein Homology CDS 4641045 4641494 . + 0 ID=cds-WP_046372311.1;Parent=gene-LU631_RS24150;Dbxref=Genbank:WP_046372311.1;Name=WP_046372311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810929.1;locus_tag=LU631_RS24150;product=SMI1/KNR4 family protein;protein_id=WP_046372311.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4641639 4642679 . + . ID=gene-LU631_RS24155;Name=LU631_RS24155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24155;old_locus_tag=LU631_24155 NZ_CP089940.1 Protein Homology CDS 4641639 4642679 . + 0 ID=cds-WP_046371818.1-6;Parent=gene-LU631_RS24155;Dbxref=Genbank:WP_046371818.1;Name=WP_046371818.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS24155;product=IS481 family transposase;protein_id=WP_046371818.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4642746 4643060 . - . ID=gene-LU631_RS24160;Name=LU631_RS24160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24160;old_locus_tag=LU631_24160 NZ_CP089940.1 Protein Homology CDS 4642746 4643060 . - 0 ID=cds-WP_046372058.1-3;Parent=gene-LU631_RS24160;Dbxref=Genbank:WP_046372058.1;Name=WP_046372058.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543193.1;locus_tag=LU631_RS24160;product=SymE family type I addiction module toxin;protein_id=WP_046372058.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4643142 4643531 . - . ID=gene-LU631_RS24165;Name=LU631_RS24165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24165;old_locus_tag=LU631_24165 NZ_CP089940.1 Protein Homology CDS 4643142 4643531 . - 0 ID=cds-WP_052734737.1-3;Parent=gene-LU631_RS24165;Dbxref=Genbank:WP_052734737.1;Name=WP_052734737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543192.1;locus_tag=LU631_RS24165;product=helix-turn-helix transcriptional regulator;protein_id=WP_052734737.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4643635 4646540 . + . ID=gene-LU631_RS24170;Name=LU631_RS24170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24170;old_locus_tag=LU631_24170;pseudo=true NZ_CP089940.1 Protein Homology CDS 4643635 4646540 . + 0 ID=cds-LU631_RS24170;Parent=gene-LU631_RS24170;Note=frameshifted;Ontology_term=GO:0006260,GO:0003677,GO:0003896,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA primase activity|0003896||IEA,zinc ion binding|0008270||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542724.1;locus_tag=LU631_RS24170;product=CHC2 zinc finger domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4646771 4646911 . + . ID=gene-LU631_RS24175;Name=LU631_RS24175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24175;old_locus_tag=LU631_24175 NZ_CP089940.1 GeneMarkS-2+ CDS 4646771 4646911 . + 0 ID=cds-WP_016192767.1;Parent=gene-LU631_RS24175;Dbxref=Genbank:WP_016192767.1;Name=WP_016192767.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS24175;product=hypothetical protein;protein_id=WP_016192767.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4646921 4647292 . + . ID=gene-LU631_RS24180;Name=LU631_RS24180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24180;old_locus_tag=LU631_24180 NZ_CP089940.1 GeneMarkS-2+ CDS 4646921 4647292 . + 0 ID=cds-WP_016192768.1;Parent=gene-LU631_RS24180;Dbxref=Genbank:WP_016192768.1;Name=WP_016192768.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS24180;product=hypothetical protein;protein_id=WP_016192768.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4648101 4648538 . + . ID=gene-LU631_RS24185;Name=LU631_RS24185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24185;old_locus_tag=LU631_24185 NZ_CP089940.1 GeneMarkS-2+ CDS 4648101 4648538 . + 0 ID=cds-WP_198292554.1;Parent=gene-LU631_RS24185;Dbxref=Genbank:WP_198292554.1;Name=WP_198292554.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS24185;product=hypothetical protein;protein_id=WP_198292554.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4648556 4649257 . + . ID=gene-LU631_RS24190;Name=LU631_RS24190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24190;old_locus_tag=LU631_24190 NZ_CP089940.1 GeneMarkS-2+ CDS 4648556 4649257 . + 0 ID=cds-WP_016192770.1;Parent=gene-LU631_RS24190;Dbxref=Genbank:WP_016192770.1;Name=WP_016192770.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS24190;product=hypothetical protein;protein_id=WP_016192770.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4649395 4649898 . - . ID=gene-LU631_RS24195;Name=LU631_RS24195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24195;old_locus_tag=LU631_24195 NZ_CP089940.1 Protein Homology CDS 4649395 4649898 . - 0 ID=cds-WP_046372088.1;Parent=gene-LU631_RS24195;Dbxref=Genbank:WP_046372088.1;Name=WP_046372088.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU631_RS24195;product=IS1 family transposase;protein_id=WP_046372088.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4649817 4650092 . - . ID=gene-LU631_RS24200;Name=LU631_RS24200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24200;old_locus_tag=LU631_24200 NZ_CP089940.1 Protein Homology CDS 4649817 4650092 . - 0 ID=cds-WP_072052824.1-2;Parent=gene-LU631_RS24200;Dbxref=Genbank:WP_072052824.1;Name=WP_072052824.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU631_RS24200;product=IS1-like element transposase;protein_id=WP_072052824.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4650163 4651100 . + . ID=gene-LU631_RS24205;Name=LU631_RS24205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24205;old_locus_tag=LU631_24205;pseudo=true NZ_CP089940.1 Protein Homology CDS 4650163 4651100 . + 0 ID=cds-LU631_RS24205;Parent=gene-LU631_RS24205;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013574788.1;locus_tag=LU631_RS24205;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4651357 4651794 . + . ID=gene-LU631_RS24210;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS24210;old_locus_tag=LU631_24210 NZ_CP089940.1 Protein Homology CDS 4651357 4651794 . + 0 ID=cds-WP_016192772.1;Parent=gene-LU631_RS24210;Dbxref=Genbank:WP_016192772.1;Name=WP_016192772.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS24210;product=IS200/IS605 family transposase;protein_id=WP_016192772.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4652324 4652878 . - . ID=gene-LU631_RS24215;Name=LU631_RS24215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24215;old_locus_tag=LU631_24215 NZ_CP089940.1 Protein Homology CDS 4652324 4652878 . - 0 ID=cds-WP_016192773.1;Parent=gene-LU631_RS24215;Dbxref=Genbank:WP_016192773.1;Name=WP_016192773.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF008575.0;locus_tag=LU631_RS24215;product=DUF3251 domain-containing protein;protein_id=WP_016192773.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4653130 4653579 . + . ID=gene-LU631_RS24220;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=LU631_RS24220;old_locus_tag=LU631_24220 NZ_CP089940.1 Protein Homology CDS 4653130 4653579 . + 0 ID=cds-WP_016192774.1;Parent=gene-LU631_RS24220;Dbxref=Genbank:WP_016192774.1;Name=WP_016192774.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=LU631_RS24220;product=transcriptional regulator NrdR;protein_id=WP_016192774.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4653583 4654686 . + . ID=gene-LU631_RS24225;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=LU631_RS24225;old_locus_tag=LU631_24225 NZ_CP089940.1 Protein Homology CDS 4653583 4654686 . + 0 ID=cds-WP_016192775.1;Parent=gene-LU631_RS24225;Dbxref=Genbank:WP_016192775.1;Name=WP_016192775.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800914.1;locus_tag=LU631_RS24225;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_016192775.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4654802 4655272 . + . ID=gene-LU631_RS24230;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=LU631_RS24230;old_locus_tag=LU631_24230 NZ_CP089940.1 Protein Homology CDS 4654802 4655272 . + 0 ID=cds-WP_016192776.1;Parent=gene-LU631_RS24230;Dbxref=Genbank:WP_016192776.1;Name=WP_016192776.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308495.1;locus_tag=LU631_RS24230;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_016192776.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4655289 4655708 . + . ID=gene-LU631_RS24235;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=LU631_RS24235;old_locus_tag=LU631_24235 NZ_CP089940.1 Protein Homology CDS 4655289 4655708 . + 0 ID=cds-WP_016192777.1;Parent=gene-LU631_RS24235;Dbxref=Genbank:WP_016192777.1;Name=WP_016192777.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201019.1;locus_tag=LU631_RS24235;product=transcription antitermination factor NusB;protein_id=WP_016192777.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4655747 4656724 . + . ID=gene-LU631_RS24240;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=LU631_RS24240;old_locus_tag=LU631_24240 NZ_CP089940.1 Protein Homology CDS 4655747 4656724 . + 0 ID=cds-WP_016192778.1;Parent=gene-LU631_RS24240;Dbxref=Genbank:WP_016192778.1;Name=WP_016192778.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156268.1;locus_tag=LU631_RS24240;product=thiamine-phosphate kinase;protein_id=WP_016192778.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4656702 4657208 . + . ID=gene-LU631_RS24245;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=LU631_RS24245;old_locus_tag=LU631_24245 NZ_CP089940.1 Protein Homology CDS 4656702 4657208 . + 0 ID=cds-WP_040465863.1;Parent=gene-LU631_RS24245;Dbxref=Genbank:WP_040465863.1;Name=WP_040465863.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156269.1;locus_tag=LU631_RS24245;product=phosphatidylglycerophosphatase A;protein_id=WP_040465863.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4657253 4658227 . - . ID=gene-LU631_RS24250;Name=LU631_RS24250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24250;old_locus_tag=LU631_24250 NZ_CP089940.1 Protein Homology CDS 4657253 4658227 . - 0 ID=cds-WP_016192780.1;Parent=gene-LU631_RS24250;Dbxref=Genbank:WP_016192780.1;Name=WP_016192780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005517.1;locus_tag=LU631_RS24250;product=aldo/keto reductase;protein_id=WP_016192780.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4658316 4660181 . - . ID=gene-LU631_RS24255;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=LU631_RS24255;old_locus_tag=LU631_24255 NZ_CP089940.1 Protein Homology CDS 4658316 4660181 . - 0 ID=cds-WP_016192781.1;Parent=gene-LU631_RS24255;Dbxref=Genbank:WP_016192781.1;Name=WP_016192781.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668902.1;locus_tag=LU631_RS24255;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_016192781.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4660201 4661100 . - . ID=gene-LU631_RS24260;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=LU631_RS24260;old_locus_tag=LU631_24260 NZ_CP089940.1 Protein Homology CDS 4660201 4661100 . - 0 ID=cds-WP_016192782.1;Parent=gene-LU631_RS24260;Dbxref=Genbank:WP_016192782.1;Name=WP_016192782.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156272.1;locus_tag=LU631_RS24260;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_016192782.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4661100 4661342 . - . ID=gene-LU631_RS24265;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=LU631_RS24265;old_locus_tag=LU631_24265 NZ_CP089940.1 Protein Homology CDS 4661100 4661342 . - 0 ID=cds-WP_016192783.1;Parent=gene-LU631_RS24265;Dbxref=Genbank:WP_016192783.1;Name=WP_016192783.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024868.1;locus_tag=LU631_RS24265;product=exodeoxyribonuclease VII small subunit;protein_id=WP_016192783.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4661672 4663120 . + . ID=gene-LU631_RS24270;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=LU631_RS24270;old_locus_tag=LU631_24270 NZ_CP089940.1 Protein Homology CDS 4661672 4663120 . + 0 ID=cds-WP_016192784.1;Parent=gene-LU631_RS24270;Dbxref=Genbank:WP_016192784.1;Name=WP_016192784.1;Ontology_term=GO:0006400,GO:0009228,GO:0003824;gbkey=CDS;gene=thiI;go_function=catalytic activity|0003824||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459420.1;locus_tag=LU631_RS24270;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WP_016192784.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4663425 4663859 . - . ID=gene-LU631_RS24275;Name=LU631_RS24275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24275;old_locus_tag=LU631_24275 NZ_CP089940.1 Protein Homology CDS 4663425 4663859 . - 0 ID=cds-WP_016192785.1;Parent=gene-LU631_RS24275;Dbxref=Genbank:WP_016192785.1;Name=WP_016192785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442899.1;locus_tag=LU631_RS24275;product=hypothetical protein;protein_id=WP_016192785.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4663856 4664556 . - . ID=gene-LU631_RS24280;Name=LU631_RS24280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24280;old_locus_tag=LU631_24280;pseudo=true NZ_CP089940.1 Protein Homology CDS 4663856 4664556 . - 0 ID=cds-LU631_RS24280;Parent=gene-LU631_RS24280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442898.1;locus_tag=LU631_RS24280;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4664779 4665215 . + . ID=gene-LU631_RS24285;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS24285;old_locus_tag=LU631_24285;pseudo=true NZ_CP089940.1 Protein Homology CDS 4664779 4665215 . + 0 ID=cds-LU631_RS24285;Parent=gene-LU631_RS24285;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU631_RS24285;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4665290 4665574 . + . ID=gene-LU631_RS24290;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU631_RS24290;old_locus_tag=LU631_24290;partial=true;pseudo=true;start_range=.,4665290 NZ_CP089940.1 Protein Homology CDS 4665290 4665574 . + 0 ID=cds-LU631_RS24290;Parent=gene-LU631_RS24290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041205574.1;locus_tag=LU631_RS24290;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,4665290;transl_table=11 NZ_CP089940.1 RefSeq gene 4665752 4666792 . + . ID=gene-LU631_RS24295;Name=LU631_RS24295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24295;old_locus_tag=LU631_24295 NZ_CP089940.1 Protein Homology CDS 4665752 4666792 . + 0 ID=cds-WP_046371791.1-23;Parent=gene-LU631_RS24295;Dbxref=Genbank:WP_046371791.1;Name=WP_046371791.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS24295;product=IS481 family transposase;protein_id=WP_046371791.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4666989 4668196 . - . ID=gene-LU631_RS24300;Name=LU631_RS24300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24300;old_locus_tag=LU631_24300;pseudo=true NZ_CP089940.1 Protein Homology CDS 4666989 4668196 . - 0 ID=cds-LU631_RS24300;Parent=gene-LU631_RS24300;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS24300;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4668635 4669127 . + . ID=gene-LU631_RS24305;Name=LU631_RS24305;end_range=4669127,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24305;old_locus_tag=LU631_24305;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4668635 4669127 . + 0 ID=cds-LU631_RS24305;Parent=gene-LU631_RS24305;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4669127,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=LU631_RS24305;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4669420 4670775 . - . ID=gene-LU631_RS24310;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=LU631_RS24310;old_locus_tag=LU631_24310 NZ_CP089940.1 Protein Homology CDS 4669420 4670775 . - 0 ID=cds-WP_016192792.1;Parent=gene-LU631_RS24310;Dbxref=Genbank:WP_016192792.1;Name=WP_016192792.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156238.1;locus_tag=LU631_RS24310;product=proline-specific permease ProY;protein_id=WP_016192792.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4670861 4672159 . - . ID=gene-LU631_RS24315;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=LU631_RS24315;old_locus_tag=LU631_24315 NZ_CP089940.1 Protein Homology CDS 4670861 4672159 . - 0 ID=cds-WP_016192793.1;Parent=gene-LU631_RS24315;Dbxref=Genbank:WP_016192793.1;Name=WP_016192793.1;Ontology_term=GO:0015803,GO:0015658;gbkey=CDS;gene=brnQ;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800902.1;locus_tag=LU631_RS24315;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_016192793.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4672250 4672435 . + . ID=gene-LU631_RS24320;Name=LU631_RS24320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24320;old_locus_tag=LU631_24320 NZ_CP089940.1 GeneMarkS-2+ CDS 4672250 4672435 . + 0 ID=cds-WP_040465865.1;Parent=gene-LU631_RS24320;Dbxref=Genbank:WP_040465865.1;Name=WP_040465865.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS24320;product=hypothetical protein;protein_id=WP_040465865.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4672551 4673636 . - . ID=gene-LU631_RS24325;Name=LU631_RS24325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24325;old_locus_tag=LU631_24325;pseudo=true NZ_CP089940.1 Protein Homology CDS 4672551 4673636 . - 0 ID=cds-LU631_RS24325;Parent=gene-LU631_RS24325;Note=frameshifted;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804972.1;locus_tag=LU631_RS24325;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4674310 4674786 . - . ID=gene-LU631_RS24330;Name=LU631_RS24330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24330;old_locus_tag=LU631_24330 NZ_CP089940.1 Protein Homology CDS 4674310 4674786 . - 0 ID=cds-WP_232426928.1;Parent=gene-LU631_RS24330;Dbxref=Genbank:WP_232426928.1;Name=WP_232426928.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028064.2;locus_tag=LU631_RS24330;product=hypothetical protein;protein_id=WP_232426928.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4675277 4675974 . + . ID=gene-LU631_RS24335;Name=LU631_RS24335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24335;old_locus_tag=LU631_24335 NZ_CP089940.1 Protein Homology CDS 4675277 4675538 . + 0 ID=cds-WP_233481955.1;Parent=gene-LU631_RS24335;Dbxref=Genbank:WP_233481955.1;Name=WP_233481955.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS24335;product=IS1 family transposase;protein_id=WP_233481955.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 4675538 4675974 . + 2 ID=cds-WP_233481955.1;Parent=gene-LU631_RS24335;Dbxref=Genbank:WP_233481955.1;Name=WP_233481955.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS24335;product=IS1 family transposase;protein_id=WP_233481955.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4676550 4677848 . - . ID=gene-LU631_RS24340;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=LU631_RS24340;old_locus_tag=LU631_24340 NZ_CP089940.1 Protein Homology CDS 4676550 4677848 . - 0 ID=cds-WP_016192797.1;Parent=gene-LU631_RS24340;Dbxref=Genbank:WP_016192797.1;Name=WP_016192797.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201000.1;locus_tag=LU631_RS24340;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_016192797.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4677873 4678562 . - . ID=gene-LU631_RS24345;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=LU631_RS24345;old_locus_tag=LU631_24345 NZ_CP089940.1 Protein Homology CDS 4677873 4678562 . - 0 ID=cds-WP_016192798.1;Parent=gene-LU631_RS24345;Dbxref=Genbank:WP_016192798.1;Name=WP_016192798.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=LU631_RS24345;product=phosphate response regulator transcription factor PhoB;protein_id=WP_016192798.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4678763 4679986 . + . ID=gene-LU631_RS24350;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=LU631_RS24350;old_locus_tag=LU631_24350 NZ_CP089940.1 Protein Homology CDS 4678763 4679986 . + 0 ID=cds-WP_016192799.1;Parent=gene-LU631_RS24350;Dbxref=Genbank:WP_016192799.1;Name=WP_016192799.1;Ontology_term=GO:0006259,GO:0008408;gbkey=CDS;gene=sbcD;go_function=3'-5' exonuclease activity|0008408||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200998.1;locus_tag=LU631_RS24350;product=exonuclease subunit SbcD;protein_id=WP_016192799.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4679983 4683657 . + . ID=gene-LU631_RS24355;Name=LU631_RS24355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24355;old_locus_tag=LU631_24355 NZ_CP089940.1 Protein Homology CDS 4679983 4683657 . + 0 ID=cds-WP_016192800.1;Parent=gene-LU631_RS24355;Dbxref=Genbank:WP_016192800.1;Name=WP_016192800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200997.1;locus_tag=LU631_RS24355;product=SbcC/MukB-like Walker B domain-containing protein;protein_id=WP_016192800.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4683739 4684374 . - . ID=gene-LU631_RS24360;Name=LU631_RS24360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24360;old_locus_tag=LU631_24360;partial=true;pseudo=true;start_range=.,4683739 NZ_CP089940.1 Protein Homology CDS 4683739 4684374 . - 0 ID=cds-LU631_RS24360;Parent=gene-LU631_RS24360;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200996.1;locus_tag=LU631_RS24360;partial=true;product=DUF799 domain-containing protein;pseudo=true;start_range=.,4683739;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4684390 4684700 . - . ID=gene-LU631_RS24365;Name=LU631_RS24365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24365;old_locus_tag=LU631_24365;pseudo=true NZ_CP089940.1 Protein Homology CDS 4684390 4684700 . - 0 ID=cds-LU631_RS24365;Parent=gene-LU631_RS24365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008106083.1;locus_tag=LU631_RS24365;product=DUF4810 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4684725 4685062 . - . ID=gene-LU631_RS24370;Name=LU631_RS24370;end_range=4685062,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24370;old_locus_tag=LU631_24370;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4684725 4685062 . - 0 ID=cds-LU631_RS24370;Parent=gene-LU631_RS24370;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4685062,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168944.1;locus_tag=LU631_RS24370;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4685392 4686303 . + . ID=gene-LU631_RS24375;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=LU631_RS24375;old_locus_tag=LU631_24375 NZ_CP089940.1 Protein Homology CDS 4685392 4686303 . + 0 ID=cds-WP_016192804.1;Parent=gene-LU631_RS24375;Dbxref=Genbank:WP_016192804.1;Name=WP_016192804.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=LU631_RS24375;product=recombination-associated protein RdgC;protein_id=WP_016192804.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4686341 4686631 . - . ID=gene-LU631_RS24380;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=LU631_RS24380;old_locus_tag=LU631_24380 NZ_CP089940.1 Protein Homology CDS 4686341 4686631 . - 0 ID=cds-WP_016192805.1;Parent=gene-LU631_RS24380;Dbxref=Genbank:WP_016192805.1;Name=WP_016192805.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024838.1;locus_tag=LU631_RS24380;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_016192805.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4686766 4687443 . - . ID=gene-LU631_RS24385;Name=LU631_RS24385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24385;old_locus_tag=LU631_24385 NZ_CP089940.1 Protein Homology CDS 4686766 4687443 . - 0 ID=cds-WP_040465873.1;Parent=gene-LU631_RS24385;Dbxref=Genbank:WP_040465873.1;Name=WP_040465873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200987.1;locus_tag=LU631_RS24385;product=AroM family protein;protein_id=WP_040465873.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4687771 4687962 . - . ID=gene-LU631_RS24390;Name=LU631_RS24390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24390;old_locus_tag=LU631_24390 NZ_CP089940.1 Protein Homology CDS 4687771 4687962 . - 0 ID=cds-WP_040465867.1;Parent=gene-LU631_RS24390;Dbxref=Genbank:WP_040465867.1;Name=WP_040465867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442273.1;locus_tag=LU631_RS24390;product=YaiA family protein;protein_id=WP_040465867.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4688290 4688814 . - . ID=gene-LU631_RS24395;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=LU631_RS24395;old_locus_tag=LU631_24395 NZ_CP089940.1 Protein Homology CDS 4688290 4688814 . - 0 ID=cds-WP_016192808.1;Parent=gene-LU631_RS24395;Dbxref=Genbank:WP_016192808.1;Name=WP_016192808.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543575.1;locus_tag=LU631_RS24395;product=shikimate kinase AroL;protein_id=WP_016192808.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4689121 4689828 . + . ID=gene-LU631_RS24400;Name=LU631_RS24400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24400;old_locus_tag=LU631_24400 NZ_CP089940.1 Protein Homology CDS 4689121 4689828 . + 0 ID=cds-WP_016192809.1;Parent=gene-LU631_RS24400;Dbxref=Genbank:WP_016192809.1;Name=WP_016192809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156177.1;locus_tag=LU631_RS24400;product=DUF2076 domain-containing protein;protein_id=WP_016192809.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4689880 4690335 . - . ID=gene-LU631_RS24405;Name=LU631_RS24405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24405;old_locus_tag=LU631_24405 NZ_CP089940.1 Protein Homology CDS 4689880 4690335 . - 0 ID=cds-WP_046372091.1;Parent=gene-LU631_RS24405;Dbxref=Genbank:WP_046372091.1;Name=WP_046372091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242949.1;locus_tag=LU631_RS24405;product=YaiI/YqxD family protein;protein_id=WP_046372091.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4691204 4692205 . - . ID=gene-LU631_RS24410;Name=LU631_RS24410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24410;old_locus_tag=LU631_24410;pseudo=true NZ_CP089940.1 Protein Homology CDS 4691204 4692205 . - 0 ID=cds-LU631_RS24410;Parent=gene-LU631_RS24410;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315785.1;locus_tag=LU631_RS24410;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4692659 4693471 . + . ID=gene-LU631_RS24415;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=LU631_RS24415;old_locus_tag=LU631_24415 NZ_CP089940.1 Protein Homology CDS 4692659 4693471 . + 0 ID=cds-WP_040465874.1;Parent=gene-LU631_RS24415;Dbxref=Genbank:WP_040465874.1;Name=WP_040465874.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168926.1;locus_tag=LU631_RS24415;product=pyrroline-5-carboxylate reductase;protein_id=WP_040465874.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4693963 4694172 . - . ID=gene-LU631_RS24420;Name=LU631_RS24420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24420;old_locus_tag=LU631_24420 NZ_CP089940.1 GeneMarkS-2+ CDS 4693963 4694172 . - 0 ID=cds-WP_152664215.1;Parent=gene-LU631_RS24420;Dbxref=Genbank:WP_152664215.1;Name=WP_152664215.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS24420;product=hypothetical protein;protein_id=WP_152664215.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4694439 4697513 . + . ID=gene-LU631_RS24425;Name=LU631_RS24425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24425;old_locus_tag=LU631_24425 NZ_CP089940.1 Protein Homology CDS 4694439 4697513 . + 0 ID=cds-WP_016192814.1;Parent=gene-LU631_RS24425;Dbxref=Genbank:WP_016192814.1;Name=WP_016192814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200978.1;locus_tag=LU631_RS24425;product=beta-galactosidase;protein_id=WP_016192814.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4697595 4697807 . - . ID=gene-LU631_RS24430;Name=LU631_RS24430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24430;old_locus_tag=LU631_24430 NZ_CP089940.1 GeneMarkS-2+ CDS 4697595 4697807 . - 0 ID=cds-WP_016192815.1;Parent=gene-LU631_RS24430;Dbxref=Genbank:WP_016192815.1;Name=WP_016192815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS24430;product=hypothetical protein;protein_id=WP_016192815.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4697878 4698090 . - . ID=gene-LU631_RS24435;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;locus_tag=LU631_RS24435;old_locus_tag=LU631_24435 NZ_CP089940.1 Protein Homology CDS 4697878 4698090 . - 0 ID=cds-WP_012442280.1;Parent=gene-LU631_RS24435;Dbxref=Genbank:WP_012442280.1;Name=WP_012442280.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066495.1;locus_tag=LU631_RS24435;product=RNA chaperone/antiterminator CspA;protein_id=WP_012442280.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4698420 4699091 . + . ID=gene-LU631_RS24440;Name=LU631_RS24440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24440;old_locus_tag=LU631_24440 NZ_CP089940.1 Protein Homology CDS 4698420 4699091 . + 0 ID=cds-WP_016192816.1;Parent=gene-LU631_RS24440;Dbxref=Genbank:WP_016192816.1;Name=WP_016192816.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964433.1;locus_tag=LU631_RS24440;product=MarC family NAAT transporter;protein_id=WP_016192816.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4699659 4699949 . - . ID=gene-LU631_RS24445;Name=LU631_RS24445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24445;old_locus_tag=LU631_24445 NZ_CP089940.1 Protein Homology CDS 4699659 4699949 . - 0 ID=cds-WP_016192817.1;Parent=gene-LU631_RS24445;Dbxref=Genbank:WP_016192817.1;Name=WP_016192817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606468.1;locus_tag=LU631_RS24445;product=I78 family peptidase inhibitor;protein_id=WP_016192817.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4700265 4701833 . + . ID=gene-LU631_RS24450;Name=LU631_RS24450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24450;old_locus_tag=LU631_24450 NZ_CP089940.1 Protein Homology CDS 4700265 4701833 . + 0 ID=cds-WP_016192818.1;Parent=gene-LU631_RS24450;Dbxref=Genbank:WP_016192818.1;Name=WP_016192818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543563.1;locus_tag=LU631_RS24450;product=ABC transporter substrate-binding protein;protein_id=WP_016192818.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4701833 4702885 . + . ID=gene-LU631_RS24455;Name=LU631_RS24455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24455;old_locus_tag=LU631_24455 NZ_CP089940.1 Protein Homology CDS 4701833 4702885 . + 0 ID=cds-WP_016192819.1;Parent=gene-LU631_RS24455;Dbxref=Genbank:WP_016192819.1;Name=WP_016192819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007886439.1;locus_tag=LU631_RS24455;product=ABC transporter permease;protein_id=WP_016192819.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4702882 4703739 . + . ID=gene-LU631_RS24460;Name=LU631_RS24460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24460;old_locus_tag=LU631_24460 NZ_CP089940.1 Protein Homology CDS 4702882 4703739 . + 0 ID=cds-WP_016192820.1;Parent=gene-LU631_RS24460;Dbxref=Genbank:WP_016192820.1;Name=WP_016192820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668946.1;locus_tag=LU631_RS24460;product=ABC transporter permease;protein_id=WP_016192820.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4703699 4704577 . + . ID=gene-LU631_RS24465;Name=LU631_RS24465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24465;old_locus_tag=LU631_24465 NZ_CP089940.1 Protein Homology CDS 4703699 4704577 . + 0 ID=cds-WP_046372092.1;Parent=gene-LU631_RS24465;Dbxref=Genbank:WP_046372092.1;Name=WP_046372092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539322.1;locus_tag=LU631_RS24465;product=ABC transporter ATP-binding protein;protein_id=WP_046372092.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4704570 4705235 . + . ID=gene-LU631_RS24470;Name=LU631_RS24470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24470;old_locus_tag=LU631_24470 NZ_CP089940.1 Protein Homology CDS 4704570 4705235 . + 0 ID=cds-WP_016192822.1;Parent=gene-LU631_RS24470;Dbxref=Genbank:WP_016192822.1;Name=WP_016192822.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168907.1;locus_tag=LU631_RS24470;product=ATP-binding cassette domain-containing protein;protein_id=WP_016192822.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4705306 4705500 . - . ID=gene-LU631_RS24475;Name=LU631_RS24475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24475;old_locus_tag=LU631_24475 NZ_CP089940.1 Protein Homology CDS 4705306 4705500 . - 0 ID=cds-WP_016192823.1;Parent=gene-LU631_RS24475;Dbxref=Genbank:WP_016192823.1;Name=WP_016192823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156145.1;locus_tag=LU631_RS24475;product=hypothetical protein;protein_id=WP_016192823.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4705593 4705952 . - . ID=gene-LU631_RS24480;Name=LU631_RS24480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24480;old_locus_tag=LU631_24480 NZ_CP089940.1 Protein Homology CDS 4705593 4705952 . - 0 ID=cds-WP_016192824.1;Parent=gene-LU631_RS24480;Dbxref=Genbank:WP_016192824.1;Name=WP_016192824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152400.1;locus_tag=LU631_RS24480;product=DUF305 domain-containing protein;protein_id=WP_016192824.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4706591 4707287 . + . ID=gene-LU631_RS24485;Name=LU631_RS24485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24485;old_locus_tag=LU631_24485 NZ_CP089940.1 Protein Homology CDS 4706591 4706853 . + 0 ID=cds-WP_233481956.1;Parent=gene-LU631_RS24485;Dbxref=Genbank:WP_233481956.1;Name=WP_233481956.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS24485;product=IS1 family transposase;protein_id=WP_233481956.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 4706852 4707287 . + 1 ID=cds-WP_233481956.1;Parent=gene-LU631_RS24485;Dbxref=Genbank:WP_233481956.1;Name=WP_233481956.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU631_RS24485;product=IS1 family transposase;protein_id=WP_233481956.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4707760 4708088 . - . ID=gene-LU631_RS24490;Name=LU631_RS24490;end_range=4708088,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24490;old_locus_tag=LU631_24490;partial=true;pseudo=true;start_range=.,4707760 NZ_CP089940.1 Protein Homology CDS 4707760 4708088 . - 0 ID=cds-LU631_RS24490;Parent=gene-LU631_RS24490;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4708088,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS24490;partial=true;product=transposase;pseudo=true;start_range=.,4707760;transl_table=11 NZ_CP089940.1 RefSeq gene 4708694 4708987 . + . ID=gene-LU631_RS24495;Name=LU631_RS24495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24495;old_locus_tag=LU631_24495 NZ_CP089940.1 Protein Homology CDS 4708694 4708987 . + 0 ID=cds-WP_016192826.1;Parent=gene-LU631_RS24495;Dbxref=Genbank:WP_016192826.1;Name=WP_016192826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668951.1;locus_tag=LU631_RS24495;product=hypothetical protein;protein_id=WP_016192826.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4709004 4710041 . + . ID=gene-LU631_RS24500;Name=LU631_RS24500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24500;old_locus_tag=LU631_24500 NZ_CP089940.1 Protein Homology CDS 4709004 4710041 . + 0 ID=cds-WP_040465868.1;Parent=gene-LU631_RS24500;Dbxref=Genbank:WP_040465868.1;Name=WP_040465868.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156143.1;locus_tag=LU631_RS24500;product=acyltransferase family protein;protein_id=WP_040465868.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4710117 4710344 . - . ID=gene-LU631_RS24505;Name=LU631_RS24505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24505;old_locus_tag=LU631_24505 NZ_CP089940.1 Protein Homology CDS 4710117 4710344 . - 0 ID=cds-WP_016192828.1;Parent=gene-LU631_RS24505;Dbxref=Genbank:WP_016192828.1;Name=WP_016192828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168902.1;locus_tag=LU631_RS24505;product=hypothetical protein;protein_id=WP_016192828.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4710411 4710998 . - . ID=gene-LU631_RS24510;Name=LU631_RS24510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24510;old_locus_tag=LU631_24510 NZ_CP089940.1 Protein Homology CDS 4710411 4710998 . - 0 ID=cds-WP_016192829.1;Parent=gene-LU631_RS24510;Dbxref=Genbank:WP_016192829.1;Name=WP_016192829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172164.1;locus_tag=LU631_RS24510;product=hypothetical protein;protein_id=WP_016192829.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4711542 4711850 . + . ID=gene-LU631_RS24515;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=LU631_RS24515;old_locus_tag=LU631_24515 NZ_CP089940.1 Protein Homology CDS 4711542 4711850 . + 0 ID=cds-WP_082103782.1;Parent=gene-LU631_RS24515;Dbxref=Genbank:WP_082103782.1;Name=WP_082103782.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: protein motif:HMM:NF022556.2;locus_tag=LU631_RS24515;product=exopolysaccharide production protein YjbE;protein_id=WP_082103782.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4711954 4712154 . + . ID=gene-LU631_RS24520;Name=LU631_RS24520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24520;old_locus_tag=LU631_24520 NZ_CP089940.1 Protein Homology CDS 4711954 4712154 . + 0 ID=cds-WP_016192831.1;Parent=gene-LU631_RS24520;Dbxref=Genbank:WP_016192831.1;Name=WP_016192831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012848748.1;locus_tag=LU631_RS24520;product=hypothetical protein;protein_id=WP_016192831.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4712688 4713131 . + . ID=gene-LU631_RS24525;Name=LU631_RS24525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24525;old_locus_tag=LU631_24525 NZ_CP089940.1 GeneMarkS-2+ CDS 4712688 4713131 . + 0 ID=cds-WP_016192832.1;Parent=gene-LU631_RS24525;Dbxref=Genbank:WP_016192832.1;Name=WP_016192832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS24525;product=N-acetylglucosamine kinase;protein_id=WP_016192832.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4714000 4714377 . + . ID=gene-LU631_RS24530;Name=LU631_RS24530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24530;old_locus_tag=LU631_24530 NZ_CP089940.1 Protein Homology CDS 4714000 4714377 . + 0 ID=cds-WP_016192833.1;Parent=gene-LU631_RS24530;Dbxref=Genbank:WP_016192833.1;Name=WP_016192833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200944.1;locus_tag=LU631_RS24530;product=hypothetical protein;protein_id=WP_016192833.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4714559 4714807 . + . ID=gene-LU631_RS24535;Name=LU631_RS24535;end_range=4714807,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24535;old_locus_tag=LU631_24535;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4714559 4714807 . + 0 ID=cds-LU631_RS24535;Parent=gene-LU631_RS24535;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=4714807,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013578006.1;locus_tag=LU631_RS24535;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4715183 4718173 . - . ID=gene-LU631_RS24540;Name=LU631_RS24540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24540;old_locus_tag=LU631_24540 NZ_CP089940.1 GeneMarkS-2+ CDS 4715183 4718173 . - 0 ID=cds-WP_233481957.1;Parent=gene-LU631_RS24540;Dbxref=Genbank:WP_233481957.1;Name=WP_233481957.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS24540;product=hypothetical protein;protein_id=WP_233481957.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4718905 4720464 . - . ID=gene-LU631_RS24545;Name=LU631_RS24545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24545;old_locus_tag=LU631_24545 NZ_CP089940.1 GeneMarkS-2+ CDS 4718905 4720464 . - 0 ID=cds-WP_233481958.1;Parent=gene-LU631_RS24545;Dbxref=Genbank:WP_233481958.1;Name=WP_233481958.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS24545;product=hypothetical protein;protein_id=WP_233481958.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4720467 4720760 . - . ID=gene-LU631_RS24550;Name=LU631_RS24550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24550;old_locus_tag=LU631_24550 NZ_CP089940.1 GeneMarkS-2+ CDS 4720467 4720760 . - 0 ID=cds-WP_040465870.1;Parent=gene-LU631_RS24550;Dbxref=Genbank:WP_040465870.1;Name=WP_040465870.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS24550;product=hypothetical protein;protein_id=WP_040465870.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4721468 4722676 . - . ID=gene-LU631_RS24555;Name=LU631_RS24555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24555;old_locus_tag=LU631_24555;pseudo=true NZ_CP089940.1 Protein Homology CDS 4721468 4722676 . - 0 ID=cds-LU631_RS24555;Parent=gene-LU631_RS24555;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368856.1;locus_tag=LU631_RS24555;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4722699 4723115 . + . ID=gene-LU631_RS24560;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU631_RS24560;old_locus_tag=LU631_24560 NZ_CP089940.1 Protein Homology CDS 4722699 4723115 . + 0 ID=cds-WP_016192838.1-2;Parent=gene-LU631_RS24560;Dbxref=Genbank:WP_016192838.1;Name=WP_016192838.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192838.1;locus_tag=LU631_RS24560;product=IS200/IS605 family transposase;protein_id=WP_016192838.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4723238 4723606 . - . ID=gene-LU631_RS24565;Name=LU631_RS24565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24565;old_locus_tag=LU631_24565 NZ_CP089940.1 GeneMarkS-2+ CDS 4723238 4723606 . - 0 ID=cds-WP_200896936.1;Parent=gene-LU631_RS24565;Dbxref=Genbank:WP_200896936.1;Name=WP_200896936.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS24565;product=hypothetical protein;protein_id=WP_200896936.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4723725 4724422 . + . ID=gene-LU631_RS24570;Name=LU631_RS24570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24570;old_locus_tag=LU631_24570 NZ_CP089940.1 Protein Homology CDS 4723725 4723974 . + 0 ID=cds-WP_233481959.1;Parent=gene-LU631_RS24570;Dbxref=Genbank:WP_233481959.1;Name=WP_233481959.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS24570;product=IS1 family transposase;protein_id=WP_233481959.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 4723974 4724422 . + 2 ID=cds-WP_233481959.1;Parent=gene-LU631_RS24570;Dbxref=Genbank:WP_233481959.1;Name=WP_233481959.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS24570;product=IS1 family transposase;protein_id=WP_233481959.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4725095 4726789 . - . ID=gene-LU631_RS24575;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=LU631_RS24575;old_locus_tag=LU631_24575 NZ_CP089940.1 Protein Homology CDS 4725095 4726789 . - 0 ID=cds-WP_046372095.1;Parent=gene-LU631_RS24575;Dbxref=Genbank:WP_046372095.1;Name=WP_046372095.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457925.1;locus_tag=LU631_RS24575;product=gamma-glutamyltransferase;protein_id=WP_046372095.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4727803 4728942 . + . ID=gene-LU631_RS26250;Name=LU631_RS26250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS26250;pseudo=true NZ_CP089940.1 Protein Homology CDS 4727803 4728942 . + 0 ID=cds-LU631_RS26250;Parent=gene-LU631_RS26250;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS26250;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4729021 4730059 . + . ID=gene-LU631_RS24590;Name=LU631_RS24590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24590;old_locus_tag=LU631_24590;pseudo=true NZ_CP089940.1 Protein Homology CDS 4729021 4730059 . + 0 ID=cds-LU631_RS24590;Parent=gene-LU631_RS24590;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS24590;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4730251 4730559 . - . ID=gene-LU631_RS24595;Name=LU631_RS24595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24595;old_locus_tag=LU631_24595 NZ_CP089940.1 Protein Homology CDS 4730251 4730559 . - 0 ID=cds-WP_016192235.1;Parent=gene-LU631_RS24595;Dbxref=Genbank:WP_016192235.1;Name=WP_016192235.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020707.2;locus_tag=LU631_RS24595;product=type III effector HopF2;protein_id=WP_016192235.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4730552 4730968 . - . ID=gene-LU631_RS24600;Name=LU631_RS24600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24600;old_locus_tag=LU631_24600 NZ_CP089940.1 Protein Homology CDS 4730552 4730968 . - 0 ID=cds-WP_016192236.1;Parent=gene-LU631_RS24600;Dbxref=Genbank:WP_016192236.1;Name=WP_016192236.1;Ontology_term=GO:0030254;gbkey=CDS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: protein motif:HMM:NF017719.2;locus_tag=LU631_RS24600;product=CesT family type III secretion system chaperone;protein_id=WP_016192236.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4731427 4731729 . + . ID=gene-LU631_RS24605;Name=LU631_RS24605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24605;old_locus_tag=LU631_24605 NZ_CP089940.1 Protein Homology CDS 4731427 4731729 . + 0 ID=cds-WP_040465767.1;Parent=gene-LU631_RS24605;Dbxref=Genbank:WP_040465767.1;Name=WP_040465767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204237.1;locus_tag=LU631_RS24605;product=DUF2756 domain-containing protein;protein_id=WP_040465767.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4731912 4732675 . - . ID=gene-LU631_RS24610;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=pseudogene;locus_tag=LU631_RS24610;old_locus_tag=LU631_24610;pseudo=true NZ_CP089940.1 Protein Homology CDS 4731912 4732675 . - 0 ID=cds-LU631_RS24610;Parent=gene-LU631_RS24610;Note=frameshifted;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204238.1;locus_tag=LU631_RS24610;product=glycerophosphodiester phosphodiesterase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4732672 4732936 . - . ID=gene-LU631_RS24615;Name=LU631_RS24615;end_range=4732936,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24615;old_locus_tag=LU631_24615;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4732672 4732936 . - 0 ID=cds-LU631_RS24615;Parent=gene-LU631_RS24615;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0005524,GO:0022857,GO:0043190;end_range=4732936,.;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852219.1;locus_tag=LU631_RS24615;partial=true;product=TOBE domain-containing protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4733293 4733748 . - . ID=gene-LU631_RS24620;Name=LU631_RS24620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24620;old_locus_tag=LU631_24620 NZ_CP089940.1 Protein Homology CDS 4733293 4733748 . - 0 ID=cds-WP_016192241.1;Parent=gene-LU631_RS24620;Dbxref=Genbank:WP_016192241.1;Name=WP_016192241.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014430.2;locus_tag=LU631_RS24620;product=IS110 family transposase;protein_id=WP_016192241.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4733845 4734686 . + . ID=gene-LU631_RS24625;Name=LU631_RS24625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24625;old_locus_tag=LU631_24625;pseudo=true NZ_CP089940.1 Protein Homology CDS 4733845 4734686 . + 0 ID=cds-LU631_RS24625;Parent=gene-LU631_RS24625;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU631_RS24625;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4734719 4735011 . - . ID=gene-LU631_RS24630;Name=LU631_RS24630;end_range=4735011,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24630;old_locus_tag=LU631_24630;partial=true;pseudo=true;start_range=.,4734719 NZ_CP089940.1 Protein Homology CDS 4734719 4735011 . - 0 ID=cds-LU631_RS24630;Parent=gene-LU631_RS24630;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4735011,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012586380.1;locus_tag=LU631_RS24630;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,4734719;transl_table=11 NZ_CP089940.1 RefSeq gene 4735431 4736141 . - . ID=gene-LU631_RS24635;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=LU631_RS24635;old_locus_tag=LU631_24635 NZ_CP089940.1 Protein Homology CDS 4735431 4736141 . - 0 ID=cds-WP_161796986.1;Parent=gene-LU631_RS24635;Dbxref=Genbank:WP_161796986.1;Name=WP_161796986.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204243.1;locus_tag=LU631_RS24635;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_161796986.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4736143 4736910 . - . ID=gene-LU631_RS24640;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=LU631_RS24640;old_locus_tag=LU631_24640 NZ_CP089940.1 Protein Homology CDS 4736143 4736910 . - 0 ID=cds-WP_016192244.1;Parent=gene-LU631_RS24640;Dbxref=Genbank:WP_016192244.1;Name=WP_016192244.1;Ontology_term=GO:0005524;gbkey=CDS;gene=livG;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462462.1;locus_tag=LU631_RS24640;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_016192244.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4736907 4738181 . - . ID=gene-LU631_RS24645;Name=LU631_RS24645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24645;old_locus_tag=LU631_24645 NZ_CP089940.1 Protein Homology CDS 4736907 4738181 . - 0 ID=cds-WP_016192245.1;Parent=gene-LU631_RS24645;Dbxref=Genbank:WP_016192245.1;Name=WP_016192245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004173538.1;locus_tag=LU631_RS24645;product=high-affinity branched-chain amino acid ABC transporter permease LivM;protein_id=WP_016192245.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4738178 4739104 . - . ID=gene-LU631_RS24650;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=LU631_RS24650;old_locus_tag=LU631_24650 NZ_CP089940.1 Protein Homology CDS 4738178 4739104 . - 0 ID=cds-WP_016192246.1;Parent=gene-LU631_RS24650;Dbxref=Genbank:WP_016192246.1;Name=WP_016192246.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=LU631_RS24650;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_016192246.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4739246 4740361 . - . ID=gene-LU631_RS24655;Name=LU631_RS24655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24655;old_locus_tag=LU631_24655 NZ_CP089940.1 Protein Homology CDS 4739246 4740361 . - 0 ID=cds-WP_016192247.1;Parent=gene-LU631_RS24655;Dbxref=Genbank:WP_016192247.1;Name=WP_016192247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191523.1;locus_tag=LU631_RS24655;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_016192247.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4740746 4741141 . + . ID=gene-LU631_RS24660;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=LU631_RS24660;old_locus_tag=LU631_24660 NZ_CP089940.1 Protein Homology CDS 4740746 4741141 . + 0 ID=cds-WP_016192248.1;Parent=gene-LU631_RS24660;Dbxref=Genbank:WP_016192248.1;Name=WP_016192248.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015962630.1;locus_tag=LU631_RS24660;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_016192248.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4741257 4742111 . - . ID=gene-LU631_RS24665;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=LU631_RS24665;old_locus_tag=LU631_24665 NZ_CP089940.1 Protein Homology CDS 4741257 4742111 . - 0 ID=cds-WP_016192249.1;Parent=gene-LU631_RS24665;Dbxref=Genbank:WP_016192249.1;Name=WP_016192249.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458573.1;locus_tag=LU631_RS24665;product=RNA polymerase sigma factor RpoH;protein_id=WP_016192249.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4742378 4743370 . - . ID=gene-LU631_RS24670;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=LU631_RS24670;old_locus_tag=LU631_24670 NZ_CP089940.1 Protein Homology CDS 4742378 4743370 . - 0 ID=cds-WP_040465779.1;Parent=gene-LU631_RS24670;Dbxref=Genbank:WP_040465779.1;Name=WP_040465779.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008109891.1;locus_tag=LU631_RS24670;product=permease-like cell division protein FtsX;protein_id=WP_040465779.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4743363 4744028 . - . ID=gene-LU631_RS24675;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=LU631_RS24675;old_locus_tag=LU631_24675 NZ_CP089940.1 Protein Homology CDS 4743363 4744028 . - 0 ID=cds-WP_016192251.1;Parent=gene-LU631_RS24675;Dbxref=Genbank:WP_016192251.1;Name=WP_016192251.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204253.1;locus_tag=LU631_RS24675;product=cell division ATP-binding protein FtsE;protein_id=WP_016192251.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4744031 4745485 . - . ID=gene-LU631_RS24680;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=LU631_RS24680;old_locus_tag=LU631_24680 NZ_CP089940.1 Protein Homology CDS 4744031 4745485 . - 0 ID=cds-WP_016192252.1;Parent=gene-LU631_RS24680;Dbxref=Genbank:WP_016192252.1;Name=WP_016192252.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160812.1;locus_tag=LU631_RS24680;product=signal recognition particle-docking protein FtsY;protein_id=WP_016192252.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4745651 4746256 . + . ID=gene-LU631_RS24685;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=LU631_RS24685;old_locus_tag=LU631_24685 NZ_CP089940.1 Protein Homology CDS 4745651 4746256 . + 0 ID=cds-WP_016192253.1;Parent=gene-LU631_RS24685;Dbxref=Genbank:WP_016192253.1;Name=WP_016192253.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204255.1;locus_tag=LU631_RS24685;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_016192253.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4746250 4746519 . + . ID=gene-LU631_RS24690;Name=LU631_RS24690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24690;old_locus_tag=LU631_24690 NZ_CP089940.1 Protein Homology CDS 4746250 4746519 . + 0 ID=cds-WP_016192254.1;Parent=gene-LU631_RS24690;Dbxref=Genbank:WP_016192254.1;Name=WP_016192254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542679.1;locus_tag=LU631_RS24690;product=DUF1145 family protein;protein_id=WP_016192254.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4746581 4746922 . - . ID=gene-LU631_RS24695;Name=LU631_RS24695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24695;old_locus_tag=LU631_24695 NZ_CP089940.1 Protein Homology CDS 4746581 4746922 . - 0 ID=cds-WP_016192255.1;Parent=gene-LU631_RS24695;Dbxref=Genbank:WP_016192255.1;Name=WP_016192255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010615906.1;locus_tag=LU631_RS24695;product=DUF2500 domain-containing protein;protein_id=WP_016192255.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4747167 4747793 . + . ID=gene-LU631_RS24700;Name=LU631_RS24700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24700;old_locus_tag=LU631_24700 NZ_CP089940.1 Protein Homology CDS 4747167 4747793 . + 0 ID=cds-WP_016192256.1;Parent=gene-LU631_RS24700;Dbxref=Genbank:WP_016192256.1;Name=WP_016192256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171227.1;locus_tag=LU631_RS24700;product=lysoplasmalogenase;protein_id=WP_016192256.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4747884 4750178 . + . ID=gene-LU631_RS24705;Name=LU631_RS24705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24705;old_locus_tag=LU631_24705 NZ_CP089940.1 Protein Homology CDS 4747884 4750178 . + 0 ID=cds-WP_040465768.1;Parent=gene-LU631_RS24705;Dbxref=Genbank:WP_040465768.1;Name=WP_040465768.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;go_function=ATPase-coupled cation transmembrane transporter activity|0019829||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160856.1;locus_tag=LU631_RS24705;product=zinc/cadmium/mercury/lead-transporting ATPase;protein_id=WP_040465768.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4750189 4750407 . + . ID=gene-LU631_RS24710;Name=LU631_RS24710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24710;old_locus_tag=LU631_24710 NZ_CP089940.1 GeneMarkS-2+ CDS 4750189 4750407 . + 0 ID=cds-WP_016192259.1;Parent=gene-LU631_RS24710;Dbxref=Genbank:WP_016192259.1;Name=WP_016192259.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS24710;product=hypothetical protein;protein_id=WP_016192259.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4750489 4750734 . - . ID=gene-LU631_RS24715;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=LU631_RS24715;old_locus_tag=LU631_24715 NZ_CP089940.1 Protein Homology CDS 4750489 4750734 . - 0 ID=cds-WP_016192260.1;Parent=gene-LU631_RS24715;Dbxref=Genbank:WP_016192260.1;Name=WP_016192260.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204261.1;locus_tag=LU631_RS24715;product=sulfurtransferase TusA;protein_id=WP_016192260.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4750977 4751642 . + . ID=gene-LU631_RS24720;Name=LU631_RS24720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24720;old_locus_tag=LU631_24720 NZ_CP089940.1 Protein Homology CDS 4750977 4751642 . + 0 ID=cds-WP_016192261.1;Parent=gene-LU631_RS24720;Dbxref=Genbank:WP_016192261.1;Name=WP_016192261.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442956.1;locus_tag=LU631_RS24720;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_016192261.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4751905 4752453 . + . ID=gene-LU631_RS24725;Name=LU631_RS24725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24725;old_locus_tag=LU631_24725 NZ_CP089940.1 Protein Homology CDS 4751905 4752453 . + 0 ID=cds-WP_016192262.1;Parent=gene-LU631_RS24725;Dbxref=Genbank:WP_016192262.1;Name=WP_016192262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001245295.1;locus_tag=LU631_RS24725;product=DcrB family lipoprotein;protein_id=WP_016192262.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4752925 4753248 . - . ID=gene-LU631_RS24730;Name=LU631_RS24730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24730;old_locus_tag=LU631_24730 NZ_CP089940.1 GeneMarkS-2+ CDS 4752925 4753248 . - 0 ID=cds-WP_152664217.1;Parent=gene-LU631_RS24730;Dbxref=Genbank:WP_152664217.1;Name=WP_152664217.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS24730;product=hypothetical protein;protein_id=WP_152664217.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4753393 4754082 . - . ID=gene-LU631_RS24735;Name=LU631_RS24735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24735;old_locus_tag=LU631_24735;pseudo=true NZ_CP089940.1 Protein Homology CDS 4753393 4754082 . - 0 ID=cds-LU631_RS24735;Parent=gene-LU631_RS24735;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=LU631_RS24735;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4754313 4756799 . - . ID=gene-LU631_RS24740;Name=LU631_RS24740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24740;old_locus_tag=LU631_24740 NZ_CP089940.1 Protein Homology CDS 4754313 4756799 . - 0 ID=cds-WP_016192264.1;Parent=gene-LU631_RS24740;Dbxref=Genbank:WP_016192264.1;Name=WP_016192264.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016242196.1;locus_tag=LU631_RS24740;product=phage tail tape measure protein;protein_id=WP_016192264.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4756832 4757425 . - . ID=gene-LU631_RS24745;Name=LU631_RS24745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24745;old_locus_tag=LU631_24745 NZ_CP089940.1 Protein Homology CDS 4756832 4757425 . - 0 ID=cds-WP_016192265.1;Parent=gene-LU631_RS24745;Dbxref=Genbank:WP_016192265.1;Name=WP_016192265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805615.1;locus_tag=LU631_RS24745;product=hypothetical protein;protein_id=WP_016192265.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4757427 4758041 . - . ID=gene-LU631_RS24750;Name=LU631_RS24750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24750;old_locus_tag=LU631_24750 NZ_CP089940.1 Protein Homology CDS 4757427 4758041 . - 0 ID=cds-WP_016192266.1;Parent=gene-LU631_RS24750;Dbxref=Genbank:WP_016192266.1;Name=WP_016192266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192266.1;locus_tag=LU631_RS24750;product=hypothetical protein;protein_id=WP_016192266.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4758043 4758570 . - . ID=gene-LU631_RS24755;Name=LU631_RS24755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24755;old_locus_tag=LU631_24755 NZ_CP089940.1 Protein Homology CDS 4758043 4758570 . - 0 ID=cds-WP_016192267.1;Parent=gene-LU631_RS24755;Dbxref=Genbank:WP_016192267.1;Name=WP_016192267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576621.1;locus_tag=LU631_RS24755;product=regulator of pectin lyase production;protein_id=WP_016192267.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4758821 4759108 . - . ID=gene-LU631_RS24760;Name=LU631_RS24760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24760;old_locus_tag=LU631_24760 NZ_CP089940.1 Protein Homology CDS 4758821 4759108 . - 0 ID=cds-WP_016192268.1;Parent=gene-LU631_RS24760;Dbxref=Genbank:WP_016192268.1;Name=WP_016192268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648201.1;locus_tag=LU631_RS24760;product=hypothetical protein;protein_id=WP_016192268.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4759105 4759584 . - . ID=gene-LU631_RS24765;Name=LU631_RS24765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24765;old_locus_tag=LU631_24765 NZ_CP089940.1 Protein Homology CDS 4759105 4759584 . - 0 ID=cds-WP_040465769.1;Parent=gene-LU631_RS24765;Dbxref=Genbank:WP_040465769.1;Name=WP_040465769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576624.1;locus_tag=LU631_RS24765;product=hypothetical protein;protein_id=WP_040465769.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4759722 4759913 . + . ID=gene-LU631_RS24770;Name=LU631_RS24770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24770;old_locus_tag=LU631_24770 NZ_CP089940.1 Protein Homology CDS 4759722 4759913 . + 0 ID=cds-WP_040465770.1;Parent=gene-LU631_RS24770;Dbxref=Genbank:WP_040465770.1;Name=WP_040465770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001442290.1;locus_tag=LU631_RS24770;product=toxin-antitoxin system HicB family antitoxin;protein_id=WP_040465770.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4759933 4760196 . + . ID=gene-LU631_RS24775;Name=LU631_RS24775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24775;old_locus_tag=LU631_24775 NZ_CP089940.1 GeneMarkS-2+ CDS 4759933 4760196 . + 0 ID=cds-WP_233481960.1;Parent=gene-LU631_RS24775;Dbxref=Genbank:WP_233481960.1;Name=WP_233481960.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS24775;product=hypothetical protein;protein_id=WP_233481960.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4761580 4761756 . + . ID=gene-LU631_RS24780;Name=LU631_RS24780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24780;old_locus_tag=LU631_24780 NZ_CP089940.1 Protein Homology CDS 4761580 4761756 . + 0 ID=cds-WP_082103785.1;Parent=gene-LU631_RS24780;Dbxref=Genbank:WP_082103785.1;Name=WP_082103785.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023411.2;locus_tag=LU631_RS24780;product=DUF3486 family protein;protein_id=WP_082103785.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4762052 4762782 . - . ID=gene-LU631_RS24785;Name=LU631_RS24785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24785;old_locus_tag=LU631_24785;partial=true;pseudo=true;start_range=.,4762052 NZ_CP089940.1 Protein Homology CDS 4762052 4762782 . - 0 ID=cds-LU631_RS24785;Parent=gene-LU631_RS24785;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001626135.1;locus_tag=LU631_RS24785;partial=true;product=MFS transporter;pseudo=true;start_range=.,4762052;transl_table=11 NZ_CP089940.1 RefSeq gene 4763219 4763359 . + . ID=gene-LU631_RS24790;Name=LU631_RS24790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24790;old_locus_tag=LU631_24790 NZ_CP089940.1 GeneMarkS-2+ CDS 4763219 4763359 . + 0 ID=cds-WP_161796965.1-22;Parent=gene-LU631_RS24790;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS24790;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4763368 4764582 . + . ID=gene-LU631_RS24795;Name=LU631_RS24795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24795;old_locus_tag=LU631_24795 NZ_CP089940.1 Protein Homology CDS 4763368 4764582 . + 0 ID=cds-WP_046371879.1-21;Parent=gene-LU631_RS24795;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS24795;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4764729 4764908 . - . ID=gene-LU631_RS24800;Name=LU631_RS24800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24800;old_locus_tag=LU631_24800;partial=true;pseudo=true;start_range=.,4764729 NZ_CP089940.1 Protein Homology CDS 4764729 4764908 . - 0 ID=cds-LU631_RS24800;Parent=gene-LU631_RS24800;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001270629.1;locus_tag=LU631_RS24800;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4764729;transl_table=11 NZ_CP089940.1 RefSeq gene 4764905 4765660 . - . ID=gene-LU631_RS24805;Name=LU631_RS24805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24805;old_locus_tag=LU631_24805 NZ_CP089940.1 Protein Homology CDS 4764905 4765660 . - 0 ID=cds-WP_016192275.1;Parent=gene-LU631_RS24805;Dbxref=Genbank:WP_016192275.1;Name=WP_016192275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742368.1;locus_tag=LU631_RS24805;product=Gp138 family membrane-puncturing spike protein;protein_id=WP_016192275.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4765660 4766640 . - . ID=gene-LU631_RS24810;Name=LU631_RS24810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24810;old_locus_tag=LU631_24810 NZ_CP089940.1 Protein Homology CDS 4765660 4766640 . - 0 ID=cds-WP_016192276.1;Parent=gene-LU631_RS24810;Dbxref=Genbank:WP_016192276.1;Name=WP_016192276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118365.1;locus_tag=LU631_RS24810;product=hypothetical protein;protein_id=WP_016192276.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4766675 4766974 . - . ID=gene-LU631_RS24815;Name=LU631_RS24815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24815;old_locus_tag=LU631_24815 NZ_CP089940.1 Protein Homology CDS 4766675 4766974 . - 0 ID=cds-WP_016192277.1;Parent=gene-LU631_RS24815;Dbxref=Genbank:WP_016192277.1;Name=WP_016192277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016537798.1;locus_tag=LU631_RS24815;product=hypothetical protein;protein_id=WP_016192277.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4766964 4767353 . - . ID=gene-LU631_RS24820;Name=LU631_RS24820;end_range=4767353,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24820;old_locus_tag=LU631_24820;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4766964 4767353 . - 0 ID=cds-LU631_RS24820;Parent=gene-LU631_RS24820;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4767353,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118367.1;locus_tag=LU631_RS24820;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4767397 4767570 . - . ID=gene-LU631_RS24825;Name=LU631_RS24825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24825;old_locus_tag=LU631_24825 NZ_CP089940.1 GeneMarkS-2+ CDS 4767397 4767570 . - 0 ID=cds-WP_157275260.1;Parent=gene-LU631_RS24825;Dbxref=Genbank:WP_157275260.1;Name=WP_157275260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS24825;product=hypothetical protein;protein_id=WP_157275260.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4768021 4768680 . + . ID=gene-LU631_RS24830;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=LU631_RS24830;old_locus_tag=LU631_24830 NZ_CP089940.1 Protein Homology CDS 4768021 4768680 . + 0 ID=cds-WP_016192279.1;Parent=gene-LU631_RS24830;Dbxref=Genbank:WP_016192279.1;Name=WP_016192279.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200067.1;locus_tag=LU631_RS24830;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_016192279.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4768759 4769799 . + . ID=gene-LU631_RS24835;Name=LU631_RS24835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24835;old_locus_tag=LU631_24835;pseudo=true NZ_CP089940.1 Protein Homology CDS 4768759 4769799 . + 0 ID=cds-LU631_RS24835;Parent=gene-LU631_RS24835;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS24835;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4769868 4772651 . - . ID=gene-LU631_RS24840;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=LU631_RS24840;old_locus_tag=LU631_24840 NZ_CP089940.1 Protein Homology CDS 4769868 4772651 . - 0 ID=cds-WP_016192282.1;Parent=gene-LU631_RS24840;Dbxref=Genbank:WP_016192282.1;Name=WP_016192282.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121852.1;locus_tag=LU631_RS24840;product=DNA polymerase I;protein_id=WP_016192282.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4773052 4773681 . - . ID=gene-LU631_RS24845;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=LU631_RS24845;old_locus_tag=LU631_24845 NZ_CP089940.1 Protein Homology CDS 4773052 4773681 . - 0 ID=cds-WP_016192283.1;Parent=gene-LU631_RS24845;Dbxref=Genbank:WP_016192283.1;Name=WP_016192283.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008109808.1;locus_tag=LU631_RS24845;product=thiol:disulfide interchange protein DsbA;protein_id=WP_016192283.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4773730 4774722 . - . ID=gene-LU631_RS24850;Name=LU631_RS24850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24850;old_locus_tag=LU631_24850 NZ_CP089940.1 Protein Homology CDS 4773730 4774722 . - 0 ID=cds-WP_016192284.1;Parent=gene-LU631_RS24850;Dbxref=Genbank:WP_016192284.1;Name=WP_016192284.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171572.1;locus_tag=LU631_RS24850;product=serine/threonine protein kinase;protein_id=WP_016192284.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4774800 4775069 . - . ID=gene-LU631_RS24855;Name=LU631_RS24855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24855;old_locus_tag=LU631_24855 NZ_CP089940.1 Protein Homology CDS 4774800 4775069 . - 0 ID=cds-WP_016192285.1;Parent=gene-LU631_RS24855;Dbxref=Genbank:WP_016192285.1;Name=WP_016192285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191202.1;locus_tag=LU631_RS24855;product=YihD family protein;protein_id=WP_016192285.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4775216 4775728 . + . ID=gene-LU631_RS24860;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=LU631_RS24860;old_locus_tag=LU631_24860 NZ_CP089940.1 Protein Homology CDS 4775216 4775728 . + 0 ID=cds-WP_233481961.1;Parent=gene-LU631_RS24860;Dbxref=Genbank:WP_233481961.1;Name=WP_233481961.1;Ontology_term=GO:0006777,GO:0005525,GO:0070568;gbkey=CDS;gene=mobA;go_function=GTP binding|0005525||IEA,guanylyltransferase activity|0070568||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014332983.1;locus_tag=LU631_RS24860;product=molybdenum cofactor guanylyltransferase;protein_id=WP_233481961.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4775725 4775871 . - . ID=gene-LU631_RS24865;Name=LU631_RS24865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24865;old_locus_tag=LU631_24865 NZ_CP089940.1 GeneMarkS-2+ CDS 4775725 4775871 . - 0 ID=cds-WP_161796987.1-2;Parent=gene-LU631_RS24865;Dbxref=Genbank:WP_161796987.1;Name=WP_161796987.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS24865;product=hypothetical protein;protein_id=WP_161796987.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4776009 4776124 . - . ID=gene-LU631_RS24870;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LU631_RS24870;old_locus_tag=LU631_24870 NZ_CP089940.1 cmsearch rRNA 4776009 4776124 . - . ID=rna-LU631_RS24870;Parent=gene-LU631_RS24870;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS24870;product=5S ribosomal RNA NZ_CP089940.1 cmsearch exon 4776009 4776124 . - . ID=exon-LU631_RS24870-1;Parent=rna-LU631_RS24870;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS24870;product=5S ribosomal RNA NZ_CP089940.1 RefSeq gene 4776328 4779230 . - . ID=gene-LU631_RS24875;Name=LU631_RS24875;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU631_RS24875;old_locus_tag=LU631_24875 NZ_CP089940.1 cmsearch rRNA 4776328 4779230 . - . ID=rna-LU631_RS24875;Parent=gene-LU631_RS24875;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS24875;product=23S ribosomal RNA NZ_CP089940.1 cmsearch exon 4776328 4779230 . - . ID=exon-LU631_RS24875-1;Parent=rna-LU631_RS24875;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS24875;product=23S ribosomal RNA NZ_CP089940.1 RefSeq gene 4779429 4779505 . - . ID=gene-LU631_RS24880;Name=LU631_RS24880;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS24880;old_locus_tag=LU631_24880 NZ_CP089940.1 tRNAscan-SE tRNA 4779429 4779505 . - . ID=rna-LU631_RS24880;Parent=gene-LU631_RS24880;anticodon=(pos:complement(4779469..4779471));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS24880;product=tRNA-Ala NZ_CP089940.1 tRNAscan-SE exon 4779429 4779505 . - . ID=exon-LU631_RS24880-1;Parent=rna-LU631_RS24880;anticodon=(pos:complement(4779469..4779471));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS24880;product=tRNA-Ala NZ_CP089940.1 RefSeq gene 4779648 4779724 . - . ID=gene-LU631_RS24885;Name=LU631_RS24885;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS24885;old_locus_tag=LU631_24885 NZ_CP089940.1 tRNAscan-SE tRNA 4779648 4779724 . - . ID=rna-LU631_RS24885;Parent=gene-LU631_RS24885;anticodon=(pos:complement(4779688..4779690));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS24885;product=tRNA-Ile NZ_CP089940.1 tRNAscan-SE exon 4779648 4779724 . - . ID=exon-LU631_RS24885-1;Parent=rna-LU631_RS24885;anticodon=(pos:complement(4779688..4779690));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS24885;product=tRNA-Ile NZ_CP089940.1 RefSeq gene 4779797 4781338 . - . ID=gene-LU631_RS24890;Name=LU631_RS24890;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU631_RS24890;old_locus_tag=LU631_24890 NZ_CP089940.1 cmsearch rRNA 4779797 4781338 . - . ID=rna-LU631_RS24890;Parent=gene-LU631_RS24890;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS24890;product=16S ribosomal RNA NZ_CP089940.1 cmsearch exon 4779797 4781338 . - . ID=exon-LU631_RS24890-1;Parent=rna-LU631_RS24890;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU631_RS24890;product=16S ribosomal RNA NZ_CP089940.1 RefSeq gene 4781739 4782275 . - . ID=gene-LU631_RS24895;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=LU631_RS24895;old_locus_tag=LU631_24895 NZ_CP089940.1 Protein Homology CDS 4781739 4782275 . - 0 ID=cds-WP_016192287.1;Parent=gene-LU631_RS24895;Dbxref=Genbank:WP_016192287.1;Name=WP_016192287.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167946.1;locus_tag=LU631_RS24895;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_016192287.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4782295 4783746 . - . ID=gene-LU631_RS24900;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=LU631_RS24900;old_locus_tag=LU631_24900 NZ_CP089940.1 Protein Homology CDS 4782295 4783746 . - 0 ID=cds-WP_016192288.1;Parent=gene-LU631_RS24900;Dbxref=Genbank:WP_016192288.1;Name=WP_016192288.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=LU631_RS24900;product=Trk system potassium transporter TrkH;protein_id=WP_016192288.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4783777 4784388 . - . ID=gene-LU631_RS24905;Name=LU631_RS24905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24905;old_locus_tag=LU631_24905 NZ_CP089940.1 Protein Homology CDS 4783777 4784388 . - 0 ID=cds-WP_016192289.1;Parent=gene-LU631_RS24905;Dbxref=Genbank:WP_016192289.1;Name=WP_016192289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167944.1;locus_tag=LU631_RS24905;product=IMPACT family protein;protein_id=WP_016192289.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4784388 4785719 . - . ID=gene-LU631_RS24910;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=LU631_RS24910;old_locus_tag=LU631_24910 NZ_CP089940.1 Protein Homology CDS 4784388 4785719 . - 0 ID=cds-WP_016192290.1;Parent=gene-LU631_RS24910;Dbxref=Genbank:WP_016192290.1;Name=WP_016192290.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666615.1;locus_tag=LU631_RS24910;product=Xaa-Pro dipeptidase;protein_id=WP_016192290.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4785897 4786883 . + . ID=gene-LU631_RS24915;Name=LU631_RS24915;end_range=4786883,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS24915;old_locus_tag=LU631_24915;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4785897 4786883 . + 0 ID=cds-LU631_RS24915;Parent=gene-LU631_RS24915;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003824;end_range=4786883,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001490315.1;locus_tag=LU631_RS24915;partial=true;product=enoyl-CoA hydratase-related protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4786886 4787213 . + . ID=gene-LU631_RS24920;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=pseudogene;locus_tag=LU631_RS24920;old_locus_tag=LU631_24920;partial=true;pseudo=true;start_range=.,4786886 NZ_CP089940.1 Protein Homology CDS 4786886 4787213 . + 0 ID=cds-LU631_RS24920;Parent=gene-LU631_RS24920;Note=FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=fadA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011091846.1;locus_tag=LU631_RS24920;partial=true;product=acetyl-CoA C-acyltransferase;pseudo=true;start_range=.,4786886;transl_table=11 NZ_CP089940.1 RefSeq gene 4787300 4788001 . - . ID=gene-LU631_RS24925;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=LU631_RS24925;old_locus_tag=LU631_24925 NZ_CP089940.1 Protein Homology CDS 4787300 4788001 . - 0 ID=cds-WP_016192294.1;Parent=gene-LU631_RS24925;Dbxref=Genbank:WP_016192294.1;Name=WP_016192294.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167939.1;locus_tag=LU631_RS24925;product=NAD(P)H-flavin reductase;protein_id=WP_016192294.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4788027 4789529 . - . ID=gene-LU631_RS24930;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=LU631_RS24930;old_locus_tag=LU631_24930 NZ_CP089940.1 Protein Homology CDS 4788027 4789529 . - 0 ID=cds-WP_016192295.1;Parent=gene-LU631_RS24930;Dbxref=Genbank:WP_016192295.1;Name=WP_016192295.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200279.1;locus_tag=LU631_RS24930;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_016192295.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4789807 4790295 . + . ID=gene-LU631_RS24935;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=LU631_RS24935;old_locus_tag=LU631_24935 NZ_CP089940.1 Protein Homology CDS 4789807 4790295 . + 0 ID=cds-WP_016192296.1;Parent=gene-LU631_RS24935;Dbxref=Genbank:WP_016192296.1;Name=WP_016192296.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359717.1;locus_tag=LU631_RS24935;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_016192296.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4790317 4791111 . - . ID=gene-LU631_RS24940;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=LU631_RS24940;old_locus_tag=LU631_24940 NZ_CP089940.1 Protein Homology CDS 4790317 4791111 . - 0 ID=cds-WP_016192297.1;Parent=gene-LU631_RS24940;Dbxref=Genbank:WP_016192297.1;Name=WP_016192297.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010257234.1;locus_tag=LU631_RS24940;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_016192297.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4791186 4791944 . - . ID=gene-LU631_RS24945;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=LU631_RS24945;old_locus_tag=LU631_24945 NZ_CP089940.1 Protein Homology CDS 4791186 4791944 . - 0 ID=cds-WP_016192298.1;Parent=gene-LU631_RS24945;Dbxref=Genbank:WP_016192298.1;Name=WP_016192298.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440006.1;locus_tag=LU631_RS24945;product=Sec-independent protein translocase subunit TatC;protein_id=WP_016192298.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4791947 4792594 . - . ID=gene-LU631_RS24950;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=LU631_RS24950;old_locus_tag=LU631_24950 NZ_CP089940.1 Protein Homology CDS 4791947 4792594 . - 0 ID=cds-WP_040465771.1;Parent=gene-LU631_RS24950;Dbxref=Genbank:WP_040465771.1;Name=WP_040465771.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072249.1;locus_tag=LU631_RS24950;product=Sec-independent protein translocase protein TatB;protein_id=WP_040465771.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4792598 4792846 . - . ID=gene-LU631_RS24955;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=LU631_RS24955;old_locus_tag=LU631_24955 NZ_CP089940.1 Protein Homology CDS 4792598 4792846 . - 0 ID=cds-WP_046372097.1;Parent=gene-LU631_RS24955;Dbxref=Genbank:WP_046372097.1;Name=WP_046372097.1;Ontology_term=GO:0015628;gbkey=CDS;gene=tatA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666606.1;locus_tag=LU631_RS24955;product=twin-arginine translocase TatA/TatE family subunit;protein_id=WP_046372097.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4792962 4794599 . - . ID=gene-LU631_RS24960;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=LU631_RS24960;old_locus_tag=LU631_24960 NZ_CP089940.1 Protein Homology CDS 4792962 4794599 . - 0 ID=cds-WP_016192301.1;Parent=gene-LU631_RS24960;Dbxref=Genbank:WP_016192301.1;Name=WP_016192301.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010257248.1;locus_tag=LU631_RS24960;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_016192301.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4794596 4795201 . - . ID=gene-LU631_RS24965;Name=LU631_RS24965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24965;old_locus_tag=LU631_24965 NZ_CP089940.1 Protein Homology CDS 4794596 4795201 . - 0 ID=cds-WP_016192302.1;Parent=gene-LU631_RS24965;Dbxref=Genbank:WP_016192302.1;Name=WP_016192302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001116086.1;locus_tag=LU631_RS24965;product=SCP2 domain-containing protein;protein_id=WP_016192302.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4795214 4795969 . - . ID=gene-LU631_RS24970;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=LU631_RS24970;old_locus_tag=LU631_24970 NZ_CP089940.1 Protein Homology CDS 4795214 4795969 . - 0 ID=cds-WP_016192303.1;Parent=gene-LU631_RS24970;Dbxref=Genbank:WP_016192303.1;Name=WP_016192303.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007704556.1;locus_tag=LU631_RS24970;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_016192303.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4796048 4797550 . - . ID=gene-LU631_RS24975;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=LU631_RS24975;old_locus_tag=LU631_24975 NZ_CP089940.1 Protein Homology CDS 4796048 4797550 . - 0 ID=cds-WP_016192304.1;Parent=gene-LU631_RS24975;Dbxref=Genbank:WP_016192304.1;Name=WP_016192304.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015344196.1;locus_tag=LU631_RS24975;product=DNA recombination protein RmuC;protein_id=WP_016192304.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4798220 4798723 . - . ID=gene-LU631_RS24980;Name=LU631_RS24980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24980;old_locus_tag=LU631_24980 NZ_CP089940.1 Protein Homology CDS 4798220 4798723 . - 0 ID=cds-WP_046372098.1;Parent=gene-LU631_RS24980;Dbxref=Genbank:WP_046372098.1;Name=WP_046372098.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU631_RS24980;product=IS1 family transposase;protein_id=WP_046372098.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4799182 4799943 . - . ID=gene-LU631_RS24990;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=LU631_RS24990;old_locus_tag=LU631_24990 NZ_CP089940.1 Protein Homology CDS 4799182 4799943 . - 0 ID=cds-WP_016192305.1;Parent=gene-LU631_RS24990;Dbxref=Genbank:WP_016192305.1;Name=WP_016192305.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224472.1;locus_tag=LU631_RS24990;product=uridine phosphorylase;protein_id=WP_016192305.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4800232 4801044 . + . ID=gene-LU631_RS24995;Name=LU631_RS24995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS24995;old_locus_tag=LU631_24995 NZ_CP089940.1 Protein Homology CDS 4800232 4801044 . + 0 ID=cds-WP_016192306.1;Parent=gene-LU631_RS24995;Dbxref=Genbank:WP_016192306.1;Name=WP_016192306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014595024.1;locus_tag=LU631_RS24995;product=dienelactone hydrolase family protein;protein_id=WP_016192306.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4801229 4803499 . - . ID=gene-LU631_RS25000;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=LU631_RS25000;old_locus_tag=LU631_25000 NZ_CP089940.1 Protein Homology CDS 4801229 4803499 . - 0 ID=cds-WP_016192307.1;Parent=gene-LU631_RS25000;Dbxref=Genbank:WP_016192307.1;Name=WP_016192307.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015842165.1;locus_tag=LU631_RS25000;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_016192307.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4803635 4804558 . + . ID=gene-LU631_RS25005;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=LU631_RS25005;old_locus_tag=LU631_25005 NZ_CP089940.1 Protein Homology CDS 4803635 4804558 . + 0 ID=cds-WP_016192308.1;Parent=gene-LU631_RS25005;Dbxref=Genbank:WP_016192308.1;Name=WP_016192308.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167926.1;locus_tag=LU631_RS25005;product=HTH-type transcriptional regulator MetR;protein_id=WP_016192308.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4804656 4805141 . + . ID=gene-LU631_RS25010;Name=LU631_RS25010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25010;old_locus_tag=LU631_25010 NZ_CP089940.1 Protein Homology CDS 4804656 4805141 . + 0 ID=cds-WP_016192309.1;Parent=gene-LU631_RS25010;Dbxref=Genbank:WP_016192309.1;Name=WP_016192309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200265.1;locus_tag=LU631_RS25010;product=DUF1456 family protein;protein_id=WP_016192309.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4805934 4806803 . - . ID=gene-LU631_RS25015;Name=LU631_RS25015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25015;old_locus_tag=LU631_25015;pseudo=true NZ_CP089940.1 Protein Homology CDS 4805934 4806803 . - 0 ID=cds-LU631_RS25015;Parent=gene-LU631_RS25015;Note=internal stop;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388404.1;locus_tag=LU631_RS25015;product=carboxylate/amino acid/amine transporter;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4806922 4807619 . - . ID=gene-LU631_RS25020;Name=LU631_RS25020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25020;old_locus_tag=LU631_25020 NZ_CP089940.1 Protein Homology CDS 4807370 4807619 . - 0 ID=cds-WP_233481962.1;Parent=gene-LU631_RS25020;Dbxref=Genbank:WP_233481962.1;Name=WP_233481962.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS25020;product=IS1 family transposase;protein_id=WP_233481962.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 4806922 4807370 . - 2 ID=cds-WP_233481962.1;Parent=gene-LU631_RS25020;Dbxref=Genbank:WP_233481962.1;Name=WP_233481962.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS25020;product=IS1 family transposase;protein_id=WP_233481962.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4807924 4809270 . + . ID=gene-LU631_RS25025;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=LU631_RS25025;old_locus_tag=LU631_25025 NZ_CP089940.1 Protein Homology CDS 4807924 4809270 . + 0 ID=cds-WP_016192312.1;Parent=gene-LU631_RS25025;Dbxref=Genbank:WP_016192312.1;Name=WP_016192312.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009127867.1;locus_tag=LU631_RS25025;product=glycerol-3-phosphate transporter;protein_id=WP_016192312.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4809293 4810312 . + . ID=gene-LU631_RS25030;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=LU631_RS25030;old_locus_tag=LU631_25030 NZ_CP089940.1 Protein Homology CDS 4809293 4810312 . + 0 ID=cds-WP_232426909.1;Parent=gene-LU631_RS25030;Dbxref=Genbank:WP_232426909.1;Name=WP_232426909.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000858943.1;locus_tag=LU631_RS25030;product=glycerophosphodiester phosphodiesterase;protein_id=WP_232426909.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4810353 4811153 . - . ID=gene-LU631_RS25035;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=LU631_RS25035;old_locus_tag=LU631_25035 NZ_CP089940.1 Protein Homology CDS 4810353 4811153 . - 0 ID=cds-WP_016192314.1;Parent=gene-LU631_RS25035;Dbxref=Genbank:WP_016192314.1;Name=WP_016192314.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167918.1;locus_tag=LU631_RS25035;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_016192314.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4811226 4812218 . - . ID=gene-LU631_RS25040;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=LU631_RS25040;old_locus_tag=LU631_25040 NZ_CP089940.1 Protein Homology CDS 4811226 4812218 . - 0 ID=cds-WP_016192315.1;Parent=gene-LU631_RS25040;Dbxref=Genbank:WP_016192315.1;Name=WP_016192315.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800670.1;locus_tag=LU631_RS25040;product=lysophospholipase L2;protein_id=WP_016192315.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4812334 4812957 . + . ID=gene-LU631_RS25045;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=LU631_RS25045;old_locus_tag=LU631_25045 NZ_CP089940.1 Protein Homology CDS 4812334 4812957 . + 0 ID=cds-WP_016192316.1;Parent=gene-LU631_RS25045;Dbxref=Genbank:WP_016192316.1;Name=WP_016192316.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154942.1;locus_tag=LU631_RS25045;product=homoserine/homoserine lactone efflux protein;protein_id=WP_016192316.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4813020 4813633 . - . ID=gene-LU631_RS25050;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=pseudogene;locus_tag=LU631_RS25050;old_locus_tag=LU631_25050;pseudo=true NZ_CP089940.1 Protein Homology CDS 4813020 4813633 . - 0 ID=cds-LU631_RS25050;Parent=gene-LU631_RS25050;Note=frameshifted%3B internal stop;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004714274.1;locus_tag=LU631_RS25050;product=threonine export protein RhtC;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4813655 4815478 . - . ID=gene-LU631_RS25055;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=LU631_RS25055;old_locus_tag=LU631_25055 NZ_CP089940.1 Protein Homology CDS 4813655 4815478 . - 0 ID=cds-WP_016192319.1;Parent=gene-LU631_RS25055;Dbxref=Genbank:WP_016192319.1;Name=WP_016192319.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854379.1;locus_tag=LU631_RS25055;product=ATP-dependent DNA helicase RecQ;protein_id=WP_016192319.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4815533 4816411 . - . ID=gene-LU631_RS25060;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=LU631_RS25060;old_locus_tag=LU631_25060 NZ_CP089940.1 Protein Homology CDS 4815533 4816411 . - 0 ID=cds-WP_016192320.1;Parent=gene-LU631_RS25060;Dbxref=Genbank:WP_016192320.1;Name=WP_016192320.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154940.1;locus_tag=LU631_RS25060;product=phospholipase A;protein_id=WP_016192320.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4816582 4817059 . + . ID=gene-LU631_RS25065;Name=LU631_RS25065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25065;old_locus_tag=LU631_25065;pseudo=true NZ_CP089940.1 Protein Homology CDS 4816582 4817059 . + 0 ID=cds-LU631_RS25065;Parent=gene-LU631_RS25065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019845840.1;locus_tag=LU631_RS25065;product=thioesterase family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4817089 4817991 . + . ID=gene-LU631_RS25070;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=LU631_RS25070;old_locus_tag=LU631_25070 NZ_CP089940.1 Protein Homology CDS 4817089 4817991 . + 0 ID=cds-WP_016192322.1;Parent=gene-LU631_RS25070;Dbxref=Genbank:WP_016192322.1;Name=WP_016192322.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200256.1;locus_tag=LU631_RS25070;product=EamA family transporter RarD;protein_id=WP_016192322.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4817986 4818939 . - . ID=gene-LU631_RS25075;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=LU631_RS25075;old_locus_tag=LU631_25075 NZ_CP089940.1 Protein Homology CDS 4817986 4818939 . - 0 ID=cds-WP_016192323.1;Parent=gene-LU631_RS25075;Dbxref=Genbank:WP_016192323.1;Name=WP_016192323.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095;gbkey=CDS;gene=corA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=LU631_RS25075;product=magnesium/cobalt transporter CorA;protein_id=WP_016192323.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4819214 4819687 . + . ID=gene-LU631_RS25080;Name=LU631_RS25080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25080;old_locus_tag=LU631_25080 NZ_CP089940.1 Protein Homology CDS 4819214 4819687 . + 0 ID=cds-WP_016192324.1;Parent=gene-LU631_RS25080;Dbxref=Genbank:WP_016192324.1;Name=WP_016192324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318314.1;locus_tag=LU631_RS25080;product=WbuC family cupin fold metalloprotein;protein_id=WP_016192324.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4819975 4822137 . - . ID=gene-LU631_RS25085;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=LU631_RS25085;old_locus_tag=LU631_25085 NZ_CP089940.1 Protein Homology CDS 4819975 4822137 . - 0 ID=cds-WP_016192325.1;Parent=gene-LU631_RS25085;Dbxref=Genbank:WP_016192325.1;Name=WP_016192325.1;Ontology_term=GO:0006268,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455510.1;locus_tag=LU631_RS25085;product=DNA helicase II;protein_id=WP_016192325.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4822195 4822911 . - . ID=gene-LU631_RS25090;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=LU631_RS25090;old_locus_tag=LU631_25090 NZ_CP089940.1 Protein Homology CDS 4822195 4822911 . - 0 ID=cds-WP_016192326.1;Parent=gene-LU631_RS25090;Dbxref=Genbank:WP_016192326.1;Name=WP_016192326.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543027.1;locus_tag=LU631_RS25090;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_016192326.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4822911 4823819 . - . ID=gene-LU631_RS25095;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=LU631_RS25095;old_locus_tag=LU631_25095 NZ_CP089940.1 Protein Homology CDS 4822911 4823819 . - 0 ID=cds-WP_016192327.1;Parent=gene-LU631_RS25095;Dbxref=Genbank:WP_016192327.1;Name=WP_016192327.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666586.1;locus_tag=LU631_RS25095;product=tyrosine recombinase XerC;protein_id=WP_016192327.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4823816 4824520 . - . ID=gene-LU631_RS25100;Name=LU631_RS25100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25100;old_locus_tag=LU631_25100 NZ_CP089940.1 Protein Homology CDS 4823816 4824520 . - 0 ID=cds-WP_016192328.1;Parent=gene-LU631_RS25100;Dbxref=Genbank:WP_016192328.1;Name=WP_016192328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854361.1;locus_tag=LU631_RS25100;product=DUF484 domain-containing protein;protein_id=WP_016192328.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4824517 4825341 . - . ID=gene-LU631_RS25105;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=LU631_RS25105;old_locus_tag=LU631_25105 NZ_CP089940.1 Protein Homology CDS 4824517 4825341 . - 0 ID=cds-WP_016192329.1;Parent=gene-LU631_RS25105;Dbxref=Genbank:WP_016192329.1;Name=WP_016192329.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=LU631_RS25105;product=diaminopimelate epimerase;protein_id=WP_016192329.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4825368 4825565 . - . ID=gene-LU631_RS25110;Name=LU631_RS25110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25110;old_locus_tag=LU631_25110 NZ_CP089940.1 Protein Homology CDS 4825368 4825565 . - 0 ID=cds-WP_046372318.1;Parent=gene-LU631_RS25110;Dbxref=Genbank:WP_046372318.1;Name=WP_046372318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543025.1;locus_tag=LU631_RS25110;product=lipoprotein;protein_id=WP_046372318.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4825745 4828300 . - . ID=gene-LU631_RS25115;Name=LU631_RS25115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25115;old_locus_tag=LU631_25115 NZ_CP089940.1 Protein Homology CDS 4825745 4828300 . - 0 ID=cds-WP_016192331.1;Parent=gene-LU631_RS25115;Dbxref=Genbank:WP_016192331.1;Name=WP_016192331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106245.1;locus_tag=LU631_RS25115;product=class I adenylate cyclase;protein_id=WP_016192331.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4828586 4829527 . + . ID=gene-LU631_RS25120;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=LU631_RS25120;old_locus_tag=LU631_25120 NZ_CP089940.1 Protein Homology CDS 4828586 4829527 . + 0 ID=cds-WP_016192332.1;Parent=gene-LU631_RS25120;Dbxref=Genbank:WP_016192332.1;Name=WP_016192332.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543023.1;locus_tag=LU631_RS25120;product=hydroxymethylbilane synthase;protein_id=WP_016192332.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4829524 4830264 . + . ID=gene-LU631_RS25125;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=LU631_RS25125;old_locus_tag=LU631_25125 NZ_CP089940.1 Protein Homology CDS 4829524 4830264 . + 0 ID=cds-WP_016192333.1;Parent=gene-LU631_RS25125;Dbxref=Genbank:WP_016192333.1;Name=WP_016192333.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359683.1;locus_tag=LU631_RS25125;product=uroporphyrinogen-III synthase;protein_id=WP_016192333.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4830289 4831413 . + . ID=gene-LU631_RS25130;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=LU631_RS25130;old_locus_tag=LU631_25130 NZ_CP089940.1 Protein Homology CDS 4830289 4831413 . + 0 ID=cds-WP_016192334.1;Parent=gene-LU631_RS25130;Dbxref=Genbank:WP_016192334.1;Name=WP_016192334.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200245.1;locus_tag=LU631_RS25130;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_016192334.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4831416 4832606 . + . ID=gene-LU631_RS25135;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=LU631_RS25135;old_locus_tag=LU631_25135 NZ_CP089940.1 Protein Homology CDS 4831416 4832606 . + 0 ID=cds-WP_016192335.1;Parent=gene-LU631_RS25135;Dbxref=Genbank:WP_016192335.1;Name=WP_016192335.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455532.1;locus_tag=LU631_RS25135;product=protoheme IX biogenesis protein HemY;protein_id=WP_016192335.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4833983 4834059 . - . ID=gene-LU631_RS25140;Name=LU631_RS25140;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS25140;old_locus_tag=LU631_25140 NZ_CP089940.1 tRNAscan-SE tRNA 4833983 4834059 . - . ID=rna-LU631_RS25140;Parent=gene-LU631_RS25140;anticodon=(pos:complement(4834023..4834025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS25140;product=tRNA-Pro NZ_CP089940.1 tRNAscan-SE exon 4833983 4834059 . - . ID=exon-LU631_RS25140-1;Parent=rna-LU631_RS25140;anticodon=(pos:complement(4834023..4834025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS25140;product=tRNA-Pro NZ_CP089940.1 RefSeq gene 4834127 4834203 . - . ID=gene-LU631_RS25145;Name=LU631_RS25145;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS25145;old_locus_tag=LU631_25145 NZ_CP089940.1 tRNAscan-SE tRNA 4834127 4834203 . - . ID=rna-LU631_RS25145;Parent=gene-LU631_RS25145;anticodon=(pos:complement(4834167..4834169));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS25145;product=tRNA-Pro NZ_CP089940.1 tRNAscan-SE exon 4834127 4834203 . - . ID=exon-LU631_RS25145-1;Parent=rna-LU631_RS25145;anticodon=(pos:complement(4834167..4834169));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS25145;product=tRNA-Pro NZ_CP089940.1 RefSeq gene 4834234 4834320 . - . ID=gene-LU631_RS25150;Name=LU631_RS25150;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS25150;old_locus_tag=LU631_25150 NZ_CP089940.1 tRNAscan-SE tRNA 4834234 4834320 . - . ID=rna-LU631_RS25150;Parent=gene-LU631_RS25150;anticodon=(pos:complement(4834284..4834286));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS25150;product=tRNA-Leu NZ_CP089940.1 tRNAscan-SE exon 4834234 4834320 . - . ID=exon-LU631_RS25150-1;Parent=rna-LU631_RS25150;anticodon=(pos:complement(4834284..4834286));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS25150;product=tRNA-Leu NZ_CP089940.1 RefSeq gene 4834336 4834411 . - . ID=gene-LU631_RS25155;Name=LU631_RS25155;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS25155;old_locus_tag=LU631_25155 NZ_CP089940.1 tRNAscan-SE tRNA 4834336 4834411 . - . ID=rna-LU631_RS25155;Parent=gene-LU631_RS25155;anticodon=(pos:complement(4834376..4834378));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS25155;product=tRNA-His NZ_CP089940.1 tRNAscan-SE exon 4834336 4834411 . - . ID=exon-LU631_RS25155-1;Parent=rna-LU631_RS25155;anticodon=(pos:complement(4834376..4834378));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS25155;product=tRNA-His NZ_CP089940.1 RefSeq gene 4834476 4834552 . - . ID=gene-LU631_RS25160;Name=LU631_RS25160;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU631_RS25160;old_locus_tag=LU631_25160 NZ_CP089940.1 tRNAscan-SE tRNA 4834476 4834552 . - . ID=rna-LU631_RS25160;Parent=gene-LU631_RS25160;anticodon=(pos:complement(4834516..4834518));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS25160;product=tRNA-Arg NZ_CP089940.1 tRNAscan-SE exon 4834476 4834552 . - . ID=exon-LU631_RS25160-1;Parent=rna-LU631_RS25160;anticodon=(pos:complement(4834516..4834518));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU631_RS25160;product=tRNA-Arg NZ_CP089940.1 RefSeq gene 4834732 4835472 . - . ID=gene-LU631_RS25165;Name=rffM;gbkey=Gene;gene=rffM;gene_biotype=protein_coding;locus_tag=LU631_RS25165;old_locus_tag=LU631_25165 NZ_CP089940.1 Protein Homology CDS 4834732 4835472 . - 0 ID=cds-WP_016192336.1;Parent=gene-LU631_RS25165;Dbxref=Genbank:WP_016192336.1;Name=WP_016192336.1;Ontology_term=GO:0016740;gbkey=CDS;gene=rffM;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015699135.1;locus_tag=LU631_RS25165;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_016192336.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4835503 4836852 . - . ID=gene-LU631_RS25170;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=LU631_RS25170;old_locus_tag=LU631_25170 NZ_CP089940.1 Protein Homology CDS 4835503 4836852 . - 0 ID=cds-WP_016192337.1;Parent=gene-LU631_RS25170;Dbxref=Genbank:WP_016192337.1;Name=WP_016192337.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004957338.1;locus_tag=LU631_RS25170;product=ECA oligosaccharide polymerase;protein_id=WP_016192337.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4836849 4837916 . - . ID=gene-LU631_RS25175;Name=LU631_RS25175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25175;old_locus_tag=LU631_25175 NZ_CP089940.1 Protein Homology CDS 4836849 4837916 . - 0 ID=cds-WP_016192338.1;Parent=gene-LU631_RS25175;Dbxref=Genbank:WP_016192338.1;Name=WP_016192338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906447.1;locus_tag=LU631_RS25175;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_016192338.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4837913 4839163 . - . ID=gene-LU631_RS25180;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=LU631_RS25180;old_locus_tag=LU631_25180 NZ_CP089940.1 Protein Homology CDS 4837913 4839163 . - 0 ID=cds-WP_016192339.1;Parent=gene-LU631_RS25180;Dbxref=Genbank:WP_016192339.1;Name=WP_016192339.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891262.1;locus_tag=LU631_RS25180;product=lipid III flippase WzxE;protein_id=WP_016192339.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4839165 4840295 . - . ID=gene-LU631_RS25185;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=LU631_RS25185;old_locus_tag=LU631_25185 NZ_CP089940.1 Protein Homology CDS 4839165 4840295 . - 0 ID=cds-WP_016192340.1;Parent=gene-LU631_RS25185;Dbxref=Genbank:WP_016192340.1;Name=WP_016192340.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010671668.1;locus_tag=LU631_RS25185;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_016192340.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4840300 4841010 . - . ID=gene-LU631_RS25190;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=LU631_RS25190;old_locus_tag=LU631_25190 NZ_CP089940.1 Protein Homology CDS 4840300 4841010 . - 0 ID=cds-WP_016192341.1;Parent=gene-LU631_RS25190;Dbxref=Genbank:WP_016192341.1;Name=WP_016192341.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800645.1;locus_tag=LU631_RS25190;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_016192341.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4841007 4842269 . - . ID=gene-LU631_RS25195;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=LU631_RS25195;old_locus_tag=LU631_25195 NZ_CP089940.1 Protein Homology CDS 4841007 4842269 . - 0 ID=cds-WP_016192342.1;Parent=gene-LU631_RS25195;Dbxref=Genbank:WP_016192342.1;Name=WP_016192342.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172152.1;locus_tag=LU631_RS25195;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_016192342.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4842266 4843396 . - . ID=gene-LU631_RS25200;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=LU631_RS25200;old_locus_tag=LU631_25200 NZ_CP089940.1 Protein Homology CDS 4842266 4843396 . - 0 ID=cds-WP_016192343.1;Parent=gene-LU631_RS25200;Dbxref=Genbank:WP_016192343.1;Name=WP_016192343.1;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026253.1;locus_tag=LU631_RS25200;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=WP_016192343.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4843446 4844474 . - . ID=gene-LU631_RS25205;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=LU631_RS25205;old_locus_tag=LU631_25205 NZ_CP089940.1 Protein Homology CDS 4843446 4844474 . - 0 ID=cds-WP_016192344.1;Parent=gene-LU631_RS25205;Dbxref=Genbank:WP_016192344.1;Name=WP_016192344.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543009.1;locus_tag=LU631_RS25205;product=ECA polysaccharide chain length modulation protein;protein_id=WP_016192344.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4844529 4845608 . - . ID=gene-LU631_RS25210;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=LU631_RS25210;old_locus_tag=LU631_25210 NZ_CP089940.1 Protein Homology CDS 4844529 4845608 . - 0 ID=cds-WP_040465773.1;Parent=gene-LU631_RS25210;Dbxref=Genbank:WP_040465773.1;Name=WP_040465773.1;Ontology_term=GO:0009246,GO:0016780;gbkey=CDS;gene=wecA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375423.1;locus_tag=LU631_RS25210;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_040465773.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4845923 4847182 . - . ID=gene-LU631_RS25215;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=LU631_RS25215;old_locus_tag=LU631_25215 NZ_CP089940.1 Protein Homology CDS 4845923 4847182 . - 0 ID=cds-WP_016192346.1;Parent=gene-LU631_RS25215;Dbxref=Genbank:WP_016192346.1;Name=WP_016192346.1;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=LU631_RS25215;product=transcription termination factor Rho;protein_id=WP_016192346.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4847641 4847973 . - . ID=gene-LU631_RS25220;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LU631_RS25220;old_locus_tag=LU631_25220 NZ_CP089940.1 Protein Homology CDS 4847641 4847973 . - 0 ID=cds-WP_016192347.1;Parent=gene-LU631_RS25220;Dbxref=Genbank:WP_016192347.1;Name=WP_016192347.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851963.1;locus_tag=LU631_RS25220;product=thioredoxin TrxA;protein_id=WP_016192347.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4848091 4849380 . + . ID=gene-LU631_RS25225;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=LU631_RS25225;old_locus_tag=LU631_25225 NZ_CP089940.1 Protein Homology CDS 4848091 4849380 . + 0 ID=cds-WP_016192348.1;Parent=gene-LU631_RS25225;Dbxref=Genbank:WP_016192348.1;Name=WP_016192348.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312740.1;locus_tag=LU631_RS25225;product=ATP-dependent RNA helicase RhlB;protein_id=WP_016192348.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4849387 4850871 . + . ID=gene-LU631_RS25230;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=LU631_RS25230;old_locus_tag=LU631_25230 NZ_CP089940.1 Protein Homology CDS 4849387 4850871 . + 0 ID=cds-WP_016192349.1;Parent=gene-LU631_RS25230;Dbxref=Genbank:WP_016192349.1;Name=WP_016192349.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001329216.1;locus_tag=LU631_RS25230;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_016192349.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4850897 4852618 . - . ID=gene-LU631_RS25235;Name=LU631_RS25235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25235;old_locus_tag=LU631_25235 NZ_CP089940.1 Protein Homology CDS 4850897 4852618 . - 0 ID=cds-WP_046372101.1;Parent=gene-LU631_RS25235;Dbxref=Genbank:WP_046372101.1;Name=WP_046372101.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012754.2;locus_tag=LU631_RS25235;product=type III helper protein HopAK1;protein_id=WP_046372101.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4852868 4854898 . - . ID=gene-LU631_RS25240;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=LU631_RS25240;old_locus_tag=LU631_25240 NZ_CP089940.1 Protein Homology CDS 4852868 4854898 . - 0 ID=cds-WP_016192351.1;Parent=gene-LU631_RS25240;Dbxref=Genbank:WP_016192351.1;Name=WP_016192351.1;Ontology_term=GO:0006268,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017345708.1;locus_tag=LU631_RS25240;product=DNA helicase Rep;protein_id=WP_016192351.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4855032 4855736 . - . ID=gene-LU631_RS25245;Name=LU631_RS25245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25245;old_locus_tag=LU631_25245 NZ_CP089940.1 Protein Homology CDS 4855032 4855736 . - 0 ID=cds-WP_046371935.1-2;Parent=gene-LU631_RS25245;Dbxref=Genbank:WP_046371935.1;Name=WP_046371935.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU631_RS25245;product=IS6 family transposase;protein_id=WP_046371935.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4855865 4856455 . - . ID=gene-LU631_RS25250;Name=LU631_RS25250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25250;old_locus_tag=LU631_25250 NZ_CP089940.1 Protein Homology CDS 4855865 4856455 . - 0 ID=cds-WP_016192352.1;Parent=gene-LU631_RS25250;Dbxref=Genbank:WP_016192352.1;Name=WP_016192352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858360.1;locus_tag=LU631_RS25250;product=type III effector protein;protein_id=WP_016192352.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4856526 4856783 . - . ID=gene-LU631_RS25255;Name=LU631_RS25255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25255;old_locus_tag=LU631_25255 NZ_CP089940.1 GeneMarkS-2+ CDS 4856526 4856783 . - 0 ID=cds-WP_016192353.1;Parent=gene-LU631_RS25255;Dbxref=Genbank:WP_016192353.1;Name=WP_016192353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS25255;product=hypothetical protein;protein_id=WP_016192353.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4856960 4858077 . + . ID=gene-LU631_RS25260;Name=LU631_RS25260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25260;old_locus_tag=LU631_25260;pseudo=true NZ_CP089940.1 Protein Homology CDS 4856960 4858077 . + 0 ID=cds-LU631_RS25260;Parent=gene-LU631_RS25260;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539782.1;locus_tag=LU631_RS25260;product=RNA-guided endonuclease TnpB family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4858458 4858748 . + . ID=gene-LU631_RS25265;Name=LU631_RS25265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25265;old_locus_tag=LU631_25265 NZ_CP089940.1 Protein Homology CDS 4858458 4858748 . + 0 ID=cds-WP_232426910.1;Parent=gene-LU631_RS25265;Dbxref=Genbank:WP_232426910.1;Name=WP_232426910.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018050.2;locus_tag=LU631_RS25265;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_232426910.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4858741 4859058 . + . ID=gene-LU631_RS25270;Name=LU631_RS25270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25270;old_locus_tag=LU631_25270 NZ_CP089940.1 Protein Homology CDS 4858741 4859058 . + 0 ID=cds-WP_016192357.1;Parent=gene-LU631_RS25270;Dbxref=Genbank:WP_016192357.1;Name=WP_016192357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192357.1;locus_tag=LU631_RS25270;product=helix-turn-helix domain-containing protein;protein_id=WP_016192357.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4859165 4859870 . + . ID=gene-LU631_RS25275;Name=LU631_RS25275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25275;old_locus_tag=LU631_25275;pseudo=true NZ_CP089940.1 Protein Homology CDS 4859165 4859870 . + 0 ID=cds-LU631_RS25275;Parent=gene-LU631_RS25275;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU631_RS25275;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4860081 4860377 . + . ID=gene-LU631_RS25280;Name=LU631_RS25280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25280;old_locus_tag=LU631_25280 NZ_CP089940.1 Protein Homology CDS 4860081 4860377 . + 0 ID=cds-WP_016192358.1;Parent=gene-LU631_RS25280;Dbxref=Genbank:WP_016192358.1;Name=WP_016192358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846807.1;locus_tag=LU631_RS25280;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_016192358.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4860379 4860663 . + . ID=gene-LU631_RS25285;Name=LU631_RS25285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25285;old_locus_tag=LU631_25285 NZ_CP089940.1 Protein Homology CDS 4860379 4860663 . + 0 ID=cds-WP_013583077.1;Parent=gene-LU631_RS25285;Dbxref=Genbank:WP_013583077.1;Name=WP_013583077.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846808.1;locus_tag=LU631_RS25285;product=putative addiction module antidote protein;protein_id=WP_013583077.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4860963 4862003 . + . ID=gene-LU631_RS25290;Name=LU631_RS25290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25290;old_locus_tag=LU631_25290 NZ_CP089940.1 Protein Homology CDS 4860963 4862003 . + 0 ID=cds-WP_046371813.1-16;Parent=gene-LU631_RS25290;Dbxref=Genbank:WP_046371813.1;Name=WP_046371813.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS25290;product=IS481 family transposase;protein_id=WP_046371813.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4862323 4863440 . + . ID=gene-LU631_RS25295;Name=LU631_RS25295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25295;old_locus_tag=LU631_25295;pseudo=true NZ_CP089940.1 Protein Homology CDS 4862323 4863440 . + 0 ID=cds-LU631_RS25295;Parent=gene-LU631_RS25295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539782.1;locus_tag=LU631_RS25295;product=RNA-guided endonuclease TnpB family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4863534 4863953 . + . ID=gene-LU631_RS25300;Name=LU631_RS25300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25300;old_locus_tag=LU631_25300 NZ_CP089940.1 Protein Homology CDS 4863534 4863953 . + 0 ID=cds-WP_016192361.1;Parent=gene-LU631_RS25300;Dbxref=Genbank:WP_016192361.1;Name=WP_016192361.1;Ontology_term=GO:0006260,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF013603.2;locus_tag=LU631_RS25300;product=protein rep;protein_id=WP_016192361.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4864023 4864631 . + . ID=gene-LU631_RS25305;Name=LU631_RS25305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25305;old_locus_tag=LU631_25305 NZ_CP089940.1 Protein Homology CDS 4864023 4864631 . + 0 ID=cds-WP_016192362.1;Parent=gene-LU631_RS25305;Dbxref=Genbank:WP_016192362.1;Name=WP_016192362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322784.1;locus_tag=LU631_RS25305;product=pesticin C-terminus-like muramidase;protein_id=WP_016192362.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4864628 4865041 . + . ID=gene-LU631_RS25310;Name=LU631_RS25310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25310;old_locus_tag=LU631_25310 NZ_CP089940.1 GeneMarkS-2+ CDS 4864628 4865041 . + 0 ID=cds-WP_016192363.1;Parent=gene-LU631_RS25310;Dbxref=Genbank:WP_016192363.1;Name=WP_016192363.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS25310;product=hypothetical protein;protein_id=WP_016192363.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4865573 4866277 . + . ID=gene-LU631_RS25315;Name=LU631_RS25315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25315;old_locus_tag=LU631_25315 NZ_CP089940.1 Protein Homology CDS 4865573 4866277 . + 0 ID=cds-WP_046371935.1-3;Parent=gene-LU631_RS25315;Dbxref=Genbank:WP_046371935.1;Name=WP_046371935.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU631_RS25315;product=IS6 family transposase;protein_id=WP_046371935.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4866330 4866584 . - . ID=gene-LU631_RS25320;Name=LU631_RS25320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25320;old_locus_tag=LU631_25320;partial=true;pseudo=true;start_range=.,4866330 NZ_CP089940.1 Protein Homology CDS 4866330 4866584 . - 0 ID=cds-LU631_RS25320;Parent=gene-LU631_RS25320;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009093298.1;locus_tag=LU631_RS25320;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4866330;transl_table=11 NZ_CP089940.1 RefSeq gene 4867390 4867755 . - . ID=gene-LU631_RS25325;Name=LU631_RS25325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25325;old_locus_tag=LU631_25325 NZ_CP089940.1 Protein Homology CDS 4867390 4867755 . - 0 ID=cds-WP_016192365.1;Parent=gene-LU631_RS25325;Dbxref=Genbank:WP_016192365.1;Name=WP_016192365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013036382.1;locus_tag=LU631_RS25325;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_016192365.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4867755 4868027 . - . ID=gene-LU631_RS25330;Name=LU631_RS25330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25330;old_locus_tag=LU631_25330 NZ_CP089940.1 Protein Homology CDS 4867755 4868027 . - 0 ID=cds-WP_016192366.1;Parent=gene-LU631_RS25330;Dbxref=Genbank:WP_016192366.1;Name=WP_016192366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013036381.1;locus_tag=LU631_RS25330;product=hypothetical protein;protein_id=WP_016192366.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4868093 4868841 . - . ID=gene-LU631_RS25335;Name=LU631_RS25335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25335;old_locus_tag=LU631_25335;pseudo=true NZ_CP089940.1 Protein Homology CDS 4868093 4868841 . - 0 ID=cds-LU631_RS25335;Parent=gene-LU631_RS25335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018636.2;locus_tag=LU631_RS25335;product=plasmid SOS inhibition protein A;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4868838 4869254 . - . ID=gene-LU631_RS25340;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=LU631_RS25340;old_locus_tag=LU631_25340 NZ_CP089940.1 Protein Homology CDS 4868838 4869254 . - 0 ID=cds-WP_016192369.1;Parent=gene-LU631_RS25340;Dbxref=Genbank:WP_016192369.1;Name=WP_016192369.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000846389.1;locus_tag=LU631_RS25340;product=conjugation system SOS inhibitor PsiB;protein_id=WP_016192369.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4869313 4869495 . - . ID=gene-LU631_RS25345;Name=LU631_RS25345;end_range=4869495,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25345;old_locus_tag=LU631_25345;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4869313 4869495 . - 0 ID=cds-LU631_RS25345;Parent=gene-LU631_RS25345;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4869495,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490556.1;locus_tag=LU631_RS25345;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4869541 4870245 . - . ID=gene-LU631_RS25350;Name=LU631_RS25350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25350;old_locus_tag=LU631_25350 NZ_CP089940.1 Protein Homology CDS 4869541 4870245 . - 0 ID=cds-WP_046371935.1-4;Parent=gene-LU631_RS25350;Dbxref=Genbank:WP_046371935.1;Name=WP_046371935.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU631_RS25350;product=IS6 family transposase;protein_id=WP_046371935.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4870282 4870530 . - . ID=gene-LU631_RS25355;Name=LU631_RS25355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25355;old_locus_tag=LU631_25355 NZ_CP089940.1 Protein Homology CDS 4870282 4870530 . - 0 ID=cds-WP_046372103.1;Parent=gene-LU631_RS25355;Dbxref=Genbank:WP_046372103.1;Name=WP_046372103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019844796.1;locus_tag=LU631_RS25355;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WP_046372103.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4871302 4872585 . - . ID=gene-LU631_RS25360;Name=LU631_RS25360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25360;old_locus_tag=LU631_25360 NZ_CP089940.1 Protein Homology CDS 4871302 4872585 . - 0 ID=cds-WP_052734715.1;Parent=gene-LU631_RS25360;Dbxref=Genbank:WP_052734715.1;Name=WP_052734715.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU631_RS25360;product=IS91 family transposase;protein_id=WP_052734715.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4872695 4873141 . - . ID=gene-LU631_RS25365;Name=LU631_RS25365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25365;old_locus_tag=LU631_25365 NZ_CP089940.1 Protein Homology CDS 4872695 4873141 . - 0 ID=cds-WP_016192372.1;Parent=gene-LU631_RS25365;Dbxref=Genbank:WP_016192372.1;Name=WP_016192372.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012698.2;locus_tag=LU631_RS25365;product=winged helix-turn-helix domain-containing protein;protein_id=WP_016192372.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4873991 4874664 . + . ID=gene-LU631_RS25370;Name=LU631_RS25370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25370;old_locus_tag=LU631_25370;pseudo=true NZ_CP089940.1 Protein Homology CDS 4873991 4874664 . + 0 ID=cds-LU631_RS25370;Parent=gene-LU631_RS25370;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=LU631_RS25370;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4875008 4875169 . + . ID=gene-LU631_RS25375;Name=LU631_RS25375;end_range=4875169,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25375;old_locus_tag=LU631_25375;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4875008 4875169 . + 0 ID=cds-LU631_RS25375;Parent=gene-LU631_RS25375;Note=involved in the transport or adenine%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4875169,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000106882.1;locus_tag=LU631_RS25375;partial=true;product=NCS2 family permease;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4875308 4876030 . - . ID=gene-LU631_RS25380;Name=LU631_RS25380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25380;old_locus_tag=LU631_25380 NZ_CP089940.1 Protein Homology CDS 4875308 4876030 . - 0 ID=cds-WP_016192375.1;Parent=gene-LU631_RS25380;Dbxref=Genbank:WP_016192375.1;Name=WP_016192375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171396.1;locus_tag=LU631_RS25380;product=hypothetical protein;protein_id=WP_016192375.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4876434 4877568 . - . ID=gene-LU631_RS25385;Name=LU631_RS25385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25385;old_locus_tag=LU631_25385;pseudo=true NZ_CP089940.1 Protein Homology CDS 4876434 4877568 . - 0 ID=cds-LU631_RS25385;Parent=gene-LU631_RS25385;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS25385;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4877773 4877984 . - . ID=gene-LU631_RS25390;Name=LU631_RS25390;end_range=4877984,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25390;old_locus_tag=LU631_25390;partial=true;pseudo=true;start_range=.,4877773 NZ_CP089940.1 Protein Homology CDS 4877773 4877984 . - 0 ID=cds-LU631_RS25390;Parent=gene-LU631_RS25390;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4877984,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=LU631_RS25390;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,4877773;transl_table=11 NZ_CP089940.1 RefSeq gene 4878121 4878825 . + . ID=gene-LU631_RS25395;Name=LU631_RS25395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25395;old_locus_tag=LU631_25395 NZ_CP089940.1 Protein Homology CDS 4878121 4878825 . + 0 ID=cds-WP_016192377.1;Parent=gene-LU631_RS25395;Dbxref=Genbank:WP_016192377.1;Name=WP_016192377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539164.1;locus_tag=LU631_RS25395;product=hypothetical protein;protein_id=WP_016192377.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4878822 4879256 . + . ID=gene-LU631_RS25400;Name=LU631_RS25400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25400;old_locus_tag=LU631_25400 NZ_CP089940.1 Protein Homology CDS 4878822 4879256 . + 0 ID=cds-WP_016192378.1;Parent=gene-LU631_RS25400;Dbxref=Genbank:WP_016192378.1;Name=WP_016192378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668625.1;locus_tag=LU631_RS25400;product=hypothetical protein;protein_id=WP_016192378.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4879411 4879773 . - . ID=gene-LU631_RS26255;Name=LU631_RS26255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26255 NZ_CP089940.1 Protein Homology CDS 4879411 4879773 . - 0 ID=cds-WP_016192379.1;Parent=gene-LU631_RS26255;Dbxref=Genbank:WP_016192379.1;Name=WP_016192379.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26255;product=IS91 family transposase;protein_id=WP_016192379.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4879773 4880036 . - . ID=gene-LU631_RS26260;Name=LU631_RS26260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26260 NZ_CP089940.1 Protein Homology CDS 4879773 4880036 . - 0 ID=cds-WP_052734716.1;Parent=gene-LU631_RS26260;Dbxref=Genbank:WP_052734716.1;Name=WP_052734716.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26260;product=transposase;protein_id=WP_052734716.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4880282 4881566 . - . ID=gene-LU631_RS25410;Name=LU631_RS25410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25410;old_locus_tag=LU631_25410;pseudo=true NZ_CP089940.1 Protein Homology CDS 4880282 4881566 . - 0 ID=cds-LU631_RS25410;Parent=gene-LU631_RS25410;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS25410;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4881782 4882479 . + . ID=gene-LU631_RS25415;Name=LU631_RS25415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25415;old_locus_tag=LU631_25415 NZ_CP089940.1 Protein Homology CDS 4881782 4882043 . + 0 ID=cds-WP_233481963.1;Parent=gene-LU631_RS25415;Dbxref=Genbank:WP_233481963.1;Name=WP_233481963.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS25415;product=IS1 family transposase;protein_id=WP_233481963.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 4882043 4882479 . + 2 ID=cds-WP_233481963.1;Parent=gene-LU631_RS25415;Dbxref=Genbank:WP_233481963.1;Name=WP_233481963.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS25415;product=IS1 family transposase;protein_id=WP_233481963.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4882575 4882910 . + . ID=gene-LU631_RS25420;Name=LU631_RS25420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25420;old_locus_tag=LU631_25420 NZ_CP089940.1 Protein Homology CDS 4882575 4882910 . + 0 ID=cds-WP_046372108.1;Parent=gene-LU631_RS25420;Dbxref=Genbank:WP_046372108.1;Name=WP_046372108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026069.1;locus_tag=LU631_RS25420;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_046372108.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4882907 4883263 . + . ID=gene-LU631_RS25425;Name=LU631_RS25425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25425;old_locus_tag=LU631_25425 NZ_CP089940.1 Protein Homology CDS 4882907 4883263 . + 0 ID=cds-WP_006122339.1;Parent=gene-LU631_RS25425;Dbxref=Genbank:WP_006122339.1;Name=WP_006122339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000127484.1;locus_tag=LU631_RS25425;product=hypothetical protein;protein_id=WP_006122339.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4883671 4883976 . + . ID=gene-LU631_RS25430;Name=LU631_RS25430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25430;old_locus_tag=LU631_25430 NZ_CP089940.1 Protein Homology CDS 4883671 4883976 . + 0 ID=cds-WP_040465786.1;Parent=gene-LU631_RS25430;Dbxref=Genbank:WP_040465786.1;Name=WP_040465786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749335.1;locus_tag=LU631_RS25430;product=hypothetical protein;protein_id=WP_040465786.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4884159 4884332 . + . ID=gene-LU631_RS25435;Name=LU631_RS25435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25435;old_locus_tag=LU631_25435 NZ_CP089940.1 GeneMarkS-2+ CDS 4884159 4884332 . + 0 ID=cds-WP_016192381.1;Parent=gene-LU631_RS25435;Dbxref=Genbank:WP_016192381.1;Name=WP_016192381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS25435;product=hypothetical protein;protein_id=WP_016192381.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4884415 4884657 . + . ID=gene-LU631_RS25440;Name=LU631_RS25440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25440;old_locus_tag=LU631_25440 NZ_CP089940.1 Protein Homology CDS 4884415 4884657 . + 0 ID=cds-WP_016192382.1;Parent=gene-LU631_RS25440;Dbxref=Genbank:WP_016192382.1;Name=WP_016192382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749332.1;locus_tag=LU631_RS25440;product=hypothetical protein;protein_id=WP_016192382.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4884647 4884862 . + . ID=gene-LU631_RS25445;Name=LU631_RS25445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25445;old_locus_tag=LU631_25445 NZ_CP089940.1 Protein Homology CDS 4884647 4884862 . + 0 ID=cds-WP_016192383.1;Parent=gene-LU631_RS25445;Dbxref=Genbank:WP_016192383.1;Name=WP_016192383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001180116.1;locus_tag=LU631_RS25445;product=hypothetical protein;protein_id=WP_016192383.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4884954 4885277 . + . ID=gene-LU631_RS25450;Name=LU631_RS25450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25450;old_locus_tag=LU631_25450 NZ_CP089940.1 Protein Homology CDS 4884954 4885277 . + 0 ID=cds-WP_016192384.1;Parent=gene-LU631_RS25450;Dbxref=Genbank:WP_016192384.1;Name=WP_016192384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000866645.1;locus_tag=LU631_RS25450;product=hypothetical protein;protein_id=WP_016192384.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4885284 4885523 . + . ID=gene-LU631_RS25455;Name=LU631_RS25455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25455;old_locus_tag=LU631_25455 NZ_CP089940.1 Protein Homology CDS 4885284 4885523 . + 0 ID=cds-WP_233481964.1;Parent=gene-LU631_RS25455;Dbxref=Genbank:WP_233481964.1;Name=WP_233481964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122357.1;locus_tag=LU631_RS25455;product=hypothetical protein;protein_id=WP_233481964.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4885664 4886361 . + . ID=gene-LU631_RS25460;Name=LU631_RS25460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25460;old_locus_tag=LU631_25460 NZ_CP089940.1 Protein Homology CDS 4885664 4885925 . + 0 ID=cds-WP_232426908.1;Parent=gene-LU631_RS25460;Dbxref=Genbank:WP_232426908.1;Name=WP_232426908.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS25460;product=IS1 family transposase;protein_id=WP_232426908.1;transl_table=11 NZ_CP089940.1 Protein Homology CDS 4885925 4886361 . + 2 ID=cds-WP_232426908.1;Parent=gene-LU631_RS25460;Dbxref=Genbank:WP_232426908.1;Name=WP_232426908.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU631_RS25460;product=IS1 family transposase;protein_id=WP_232426908.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4886843 4886983 . + . ID=gene-LU631_RS25465;Name=LU631_RS25465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25465;old_locus_tag=LU631_25465 NZ_CP089940.1 GeneMarkS-2+ CDS 4886843 4886983 . + 0 ID=cds-WP_161796965.1-23;Parent=gene-LU631_RS25465;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS25465;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4886992 4888206 . + . ID=gene-LU631_RS25470;Name=LU631_RS25470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25470;old_locus_tag=LU631_25470 NZ_CP089940.1 Protein Homology CDS 4886992 4888206 . + 0 ID=cds-WP_233481965.1;Parent=gene-LU631_RS25470;Dbxref=Genbank:WP_233481965.1;Name=WP_233481965.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS25470;product=IS91 family transposase;protein_id=WP_233481965.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4888360 4888464 . - . ID=gene-LU631_RS25475;Name=LU631_RS25475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25475;old_locus_tag=LU631_25475;partial=true;pseudo=true;start_range=.,4888360 NZ_CP089940.1 Protein Homology CDS 4888360 4888464 . - 0 ID=cds-LU631_RS25475;Parent=gene-LU631_RS25475;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU631_RS25475;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,4888360;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4888927 4889449 . - . ID=gene-LU631_RS25480;Name=LU631_RS25480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25480;old_locus_tag=LU631_25480;pseudo=true NZ_CP089940.1 Protein Homology CDS 4888927 4889449 . - 0 ID=cds-LU631_RS25480;Parent=gene-LU631_RS25480;Note=frameshifted;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000470624.1;locus_tag=LU631_RS25480;product=recombinase family protein;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4889631 4889884 . - . ID=gene-LU631_RS25485;Name=LU631_RS25485;end_range=4889884,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25485;old_locus_tag=LU631_25485;partial=true;pseudo=true;start_range=.,4889631 NZ_CP089940.1 Protein Homology CDS 4889631 4889884 . - 0 ID=cds-LU631_RS25485;Parent=gene-LU631_RS25485;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4889884,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611198.1;locus_tag=LU631_RS25485;partial=true;product=transposase;pseudo=true;start_range=.,4889631;transl_table=11 NZ_CP089940.1 RefSeq gene 4889893 4890195 . - . ID=gene-LU631_RS25490;Name=gspS;gbkey=Gene;gene=gspS;gene_biotype=protein_coding;locus_tag=LU631_RS25490;old_locus_tag=LU631_25490 NZ_CP089940.1 Protein Homology CDS 4889893 4890195 . - 0 ID=cds-WP_040465787.1;Parent=gene-LU631_RS25490;Dbxref=Genbank:WP_040465787.1;Name=WP_040465787.1;gbkey=CDS;gene=gspS;inference=COORDINATES: protein motif:HMM:TIGR01004.2;locus_tag=LU631_RS25490;product=type II secretion system pilot lipoprotein GspS;protein_id=WP_040465787.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4890322 4891092 . - . ID=gene-LU631_RS25495;Name=LU631_RS25495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25495;old_locus_tag=LU631_25495 NZ_CP089940.1 Protein Homology CDS 4890322 4891092 . - 0 ID=cds-WP_016192390.1;Parent=gene-LU631_RS25495;Dbxref=Genbank:WP_016192390.1;Name=WP_016192390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005173855.1;locus_tag=LU631_RS25495;product=A24 family peptidase;protein_id=WP_016192390.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4891093 4891539 . - . ID=gene-LU631_RS25500;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=LU631_RS25500;old_locus_tag=LU631_25500 NZ_CP089940.1 Protein Homology CDS 4891093 4891539 . - 0 ID=cds-WP_016192391.1;Parent=gene-LU631_RS25500;Dbxref=Genbank:WP_016192391.1;Name=WP_016192391.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspM;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122122.1;locus_tag=LU631_RS25500;product=type II secretion system protein GspM;protein_id=WP_016192391.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4891529 4892722 . - . ID=gene-LU631_RS25505;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=LU631_RS25505;old_locus_tag=LU631_25505 NZ_CP089940.1 Protein Homology CDS 4891529 4892722 . - 0 ID=cds-WP_233481966.1;Parent=gene-LU631_RS25505;Dbxref=Genbank:WP_233481966.1;Name=WP_233481966.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspL;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122121.1;locus_tag=LU631_RS25505;product=type II secretion system protein GspL;protein_id=WP_233481966.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4892725 4893624 . - . ID=gene-LU631_RS25510;Name=LU631_RS25510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25510;old_locus_tag=LU631_25510 NZ_CP089940.1 Protein Homology CDS 4892725 4893624 . - 0 ID=cds-WP_016192393.1;Parent=gene-LU631_RS25510;Dbxref=Genbank:WP_016192393.1;Name=WP_016192393.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122119.1;locus_tag=LU631_RS25510;product=type II secretion system protein GspK;protein_id=WP_016192393.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4893624 4894175 . - . ID=gene-LU631_RS25515;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=LU631_RS25515;old_locus_tag=LU631_25515 NZ_CP089940.1 Protein Homology CDS 4893624 4894175 . - 0 ID=cds-WP_016192394.1;Parent=gene-LU631_RS25515;Dbxref=Genbank:WP_016192394.1;Name=WP_016192394.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspJ;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122117.1;locus_tag=LU631_RS25515;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_016192394.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4894172 4894567 . - . ID=gene-LU631_RS25520;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=LU631_RS25520;old_locus_tag=LU631_25520 NZ_CP089940.1 Protein Homology CDS 4894172 4894567 . - 0 ID=cds-WP_016192395.1;Parent=gene-LU631_RS25520;Dbxref=Genbank:WP_016192395.1;Name=WP_016192395.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122116.1;locus_tag=LU631_RS25520;product=type II secretion system minor pseudopilin GspI;protein_id=WP_016192395.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4894569 4895012 . - . ID=gene-LU631_RS25525;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=LU631_RS25525;old_locus_tag=LU631_25525 NZ_CP089940.1 Protein Homology CDS 4894569 4895012 . - 0 ID=cds-WP_016192396.1;Parent=gene-LU631_RS25525;Dbxref=Genbank:WP_016192396.1;Name=WP_016192396.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122115.1;locus_tag=LU631_RS25525;product=type II secretion system major pseudopilin GspG;protein_id=WP_016192396.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4895035 4896234 . - . ID=gene-LU631_RS25530;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=LU631_RS25530;old_locus_tag=LU631_25530 NZ_CP089940.1 Protein Homology CDS 4895035 4896234 . - 0 ID=cds-WP_016192397.1;Parent=gene-LU631_RS25530;Dbxref=Genbank:WP_016192397.1;Name=WP_016192397.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122114.1;locus_tag=LU631_RS25530;product=type II secretion system inner membrane protein GspF;protein_id=WP_016192397.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4896224 4897705 . - . ID=gene-LU631_RS25535;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=LU631_RS25535;old_locus_tag=LU631_25535 NZ_CP089940.1 Protein Homology CDS 4896224 4897705 . - 0 ID=cds-WP_016192398.1;Parent=gene-LU631_RS25535;Dbxref=Genbank:WP_016192398.1;Name=WP_016192398.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012770980.1;locus_tag=LU631_RS25535;product=type II secretion system ATPase GspE;protein_id=WP_016192398.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4897705 4899885 . - . ID=gene-LU631_RS25540;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=LU631_RS25540;old_locus_tag=LU631_25540 NZ_CP089940.1 Protein Homology CDS 4897705 4899885 . - 0 ID=cds-WP_233481967.1;Parent=gene-LU631_RS25540;Dbxref=Genbank:WP_233481967.1;Name=WP_233481967.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122112.1;locus_tag=LU631_RS25540;product=type II secretion system secretin GspD;protein_id=WP_233481967.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4899923 4900429 . - . ID=gene-LU631_RS25545;Name=LU631_RS25545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25545;old_locus_tag=LU631_25545 NZ_CP089940.1 Protein Homology CDS 4899923 4900429 . - 0 ID=cds-WP_233479593.1;Parent=gene-LU631_RS25545;Dbxref=Genbank:WP_233479593.1;Name=WP_233479593.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022800.2;locus_tag=LU631_RS25545;product=hypothetical protein;protein_id=WP_233479593.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4900949 4901624 . - . ID=gene-LU631_RS25550;Name=LU631_RS25550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25550;old_locus_tag=LU631_25550;pseudo=true NZ_CP089940.1 Protein Homology CDS 4900949 4901624 . - 0 ID=cds-LU631_RS25550;Parent=gene-LU631_RS25550;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=LU631_RS25550;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4901793 4901996 . - . ID=gene-LU631_RS25555;Name=LU631_RS25555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25555;old_locus_tag=LU631_25555 NZ_CP089940.1 Protein Homology CDS 4901793 4901996 . - 0 ID=cds-WP_052734718.1;Parent=gene-LU631_RS25555;Dbxref=Genbank:WP_052734718.1;Name=WP_052734718.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018986.2;locus_tag=LU631_RS25555;product=DUF1471 domain-containing protein;protein_id=WP_052734718.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4902057 4902841 . + . ID=gene-LU631_RS25560;Name=LU631_RS25560;end_range=4902841,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25560;old_locus_tag=LU631_25560;partial=true;pseudo=true NZ_CP089940.1 Protein Homology CDS 4902057 4902841 . + 0 ID=cds-LU631_RS25560;Parent=gene-LU631_RS25560;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=4902841,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612097.1;locus_tag=LU631_RS25560;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4902862 4904185 . - . ID=gene-LU631_RS25565;Name=LU631_RS25565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25565;old_locus_tag=LU631_25565;pseudo=true NZ_CP089940.1 Protein Homology CDS 4902862 4904185 . - 0 ID=cds-LU631_RS25565;Parent=gene-LU631_RS25565;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU631_RS25565;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4904273 4904659 . + . ID=gene-LU631_RS25570;Name=LU631_RS25570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25570;old_locus_tag=LU631_25570;partial=true;pseudo=true;start_range=.,4904273 NZ_CP089940.1 Protein Homology CDS 4904273 4904659 . + 0 ID=cds-LU631_RS25570;Parent=gene-LU631_RS25570;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611680.1;locus_tag=LU631_RS25570;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,4904273;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4904668 4904796 . - . ID=gene-LU631_RS25575;Name=LU631_RS25575;end_range=4904796,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25575;old_locus_tag=LU631_25575;partial=true;pseudo=true;start_range=.,4904668 NZ_CP089940.1 Protein Homology CDS 4904668 4904796 . - 0 ID=cds-LU631_RS25575;Parent=gene-LU631_RS25575;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4904796,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151241.1;locus_tag=LU631_RS25575;partial=true;product=MBL fold metallo-hydrolase;pseudo=true;start_range=.,4904668;transl_table=11 NZ_CP089940.1 RefSeq gene 4904912 4905100 . + . ID=gene-LU631_RS25580;Name=LU631_RS25580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25580;old_locus_tag=LU631_25580 NZ_CP089940.1 Protein Homology CDS 4904912 4905100 . + 0 ID=cds-WP_020322936.1-5;Parent=gene-LU631_RS25580;Dbxref=Genbank:WP_020322936.1;Name=WP_020322936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192885.1;locus_tag=LU631_RS25580;product=hypothetical protein;protein_id=WP_020322936.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4905109 4906308 . + . ID=gene-LU631_RS25585;Name=LU631_RS25585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25585;old_locus_tag=LU631_25585 NZ_CP089940.1 Protein Homology CDS 4905109 4906308 . + 0 ID=cds-WP_046372110.1-4;Parent=gene-LU631_RS25585;Dbxref=Genbank:WP_046372110.1;Name=WP_046372110.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU631_RS25585;product=IS91 family transposase;protein_id=WP_046372110.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4906888 4908102 . - . ID=gene-LU631_RS25590;Name=LU631_RS25590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25590;old_locus_tag=LU631_25590 NZ_CP089940.1 Protein Homology CDS 4906888 4908102 . - 0 ID=cds-WP_046371879.1-22;Parent=gene-LU631_RS25590;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS25590;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4908111 4908251 . - . ID=gene-LU631_RS25595;Name=LU631_RS25595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25595;old_locus_tag=LU631_25595 NZ_CP089940.1 GeneMarkS-2+ CDS 4908111 4908251 . - 0 ID=cds-WP_161796965.1-24;Parent=gene-LU631_RS25595;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS25595;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4908646 4910514 . - . ID=gene-LU631_RS25600;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=LU631_RS25600;old_locus_tag=LU631_25600 NZ_CP089940.1 Protein Homology CDS 4908646 4910514 . - 0 ID=cds-WP_016192404.1;Parent=gene-LU631_RS25600;Dbxref=Genbank:WP_016192404.1;Name=WP_016192404.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224306.1;locus_tag=LU631_RS25600;product=low affinity potassium transporter Kup;protein_id=WP_016192404.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4910776 4912269 . + . ID=gene-LU631_RS25605;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=LU631_RS25605;old_locus_tag=LU631_25605 NZ_CP089940.1 Protein Homology CDS 4910776 4912269 . + 0 ID=cds-WP_016192405.1;Parent=gene-LU631_RS25605;Dbxref=Genbank:WP_016192405.1;Name=WP_016192405.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594928.1;locus_tag=LU631_RS25605;product=ATPase RavA;protein_id=WP_016192405.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4912266 4913729 . + . ID=gene-LU631_RS25610;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=LU631_RS25610;old_locus_tag=LU631_25610 NZ_CP089940.1 Protein Homology CDS 4912266 4913729 . + 0 ID=cds-WP_016192406.1;Parent=gene-LU631_RS25610;Dbxref=Genbank:WP_016192406.1;Name=WP_016192406.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106775.1;locus_tag=LU631_RS25610;product=ATPase RavA stimulator ViaA;protein_id=WP_016192406.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4914233 4914373 . + . ID=gene-LU631_RS25615;Name=LU631_RS25615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25615;old_locus_tag=LU631_25615 NZ_CP089940.1 GeneMarkS-2+ CDS 4914233 4914373 . + 0 ID=cds-WP_161796965.1-25;Parent=gene-LU631_RS25615;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS25615;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4914382 4915596 . + . ID=gene-LU631_RS25620;Name=LU631_RS25620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25620;old_locus_tag=LU631_25620 NZ_CP089940.1 Protein Homology CDS 4914382 4915596 . + 0 ID=cds-WP_046371879.1-23;Parent=gene-LU631_RS25620;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU631_RS25620;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4915834 4916722 . + . ID=gene-LU631_RS25625;Name=LU631_RS25625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25625;old_locus_tag=LU631_25625;pseudo=true NZ_CP089940.1 Protein Homology CDS 4915834 4916722 . + 0 ID=cds-LU631_RS25625;Parent=gene-LU631_RS25625;Note=frameshifted;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS25625;product=transposase;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4916723 4917058 . + . ID=gene-LU631_RS25630;Name=LU631_RS25630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25630;old_locus_tag=LU631_25630 NZ_CP089940.1 GeneMarkS-2+ CDS 4916723 4917058 . + 0 ID=cds-WP_072052843.1;Parent=gene-LU631_RS25630;Dbxref=Genbank:WP_072052843.1;Name=WP_072052843.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS25630;product=transposase;protein_id=WP_072052843.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4917275 4917694 . - . ID=gene-LU631_RS25635;Name=LU631_RS25635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25635;old_locus_tag=LU631_25635 NZ_CP089940.1 Protein Homology CDS 4917275 4917694 . - 0 ID=cds-WP_016192407.1;Parent=gene-LU631_RS25635;Dbxref=Genbank:WP_016192407.1;Name=WP_016192407.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=LU631_RS25635;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_016192407.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4917719 4919101 . - . ID=gene-LU631_RS25640;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=LU631_RS25640;old_locus_tag=LU631_25640 NZ_CP089940.1 Protein Homology CDS 4917719 4919101 . - 0 ID=cds-WP_016192408.1;Parent=gene-LU631_RS25640;Dbxref=Genbank:WP_016192408.1;Name=WP_016192408.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=LU631_RS25640;product=F0F1 ATP synthase subunit beta;protein_id=WP_016192408.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4919244 4920113 . - . ID=gene-LU631_RS25645;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=LU631_RS25645;old_locus_tag=LU631_25645 NZ_CP089940.1 Protein Homology CDS 4919244 4920113 . - 0 ID=cds-WP_016192409.1;Parent=gene-LU631_RS25645;Dbxref=Genbank:WP_016192409.1;Name=WP_016192409.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462765.1;locus_tag=LU631_RS25645;product=F0F1 ATP synthase subunit gamma;protein_id=WP_016192409.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4920168 4921709 . - . ID=gene-LU631_RS25650;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=LU631_RS25650;old_locus_tag=LU631_25650 NZ_CP089940.1 Protein Homology CDS 4920168 4921709 . - 0 ID=cds-WP_016192410.1;Parent=gene-LU631_RS25650;Dbxref=Genbank:WP_016192410.1;Name=WP_016192410.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=LU631_RS25650;product=F0F1 ATP synthase subunit alpha;protein_id=WP_016192410.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4921724 4922257 . - . ID=gene-LU631_RS25655;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=LU631_RS25655;old_locus_tag=LU631_25655 NZ_CP089940.1 Protein Homology CDS 4921724 4922257 . - 0 ID=cds-WP_016192411.1;Parent=gene-LU631_RS25655;Dbxref=Genbank:WP_016192411.1;Name=WP_016192411.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=LU631_RS25655;product=F0F1 ATP synthase subunit delta;protein_id=WP_016192411.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4922272 4922742 . - . ID=gene-LU631_RS25660;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=LU631_RS25660;old_locus_tag=LU631_25660 NZ_CP089940.1 Protein Homology CDS 4922272 4922742 . - 0 ID=cds-WP_016192412.1;Parent=gene-LU631_RS25660;Dbxref=Genbank:WP_016192412.1;Name=WP_016192412.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=LU631_RS25660;product=F0F1 ATP synthase subunit B;protein_id=WP_016192412.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4922837 4923079 . - . ID=gene-LU631_RS25665;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=LU631_RS25665;old_locus_tag=LU631_25665 NZ_CP089940.1 Protein Homology CDS 4922837 4923079 . - 0 ID=cds-WP_016192413.1;Parent=gene-LU631_RS25665;Dbxref=Genbank:WP_016192413.1;Name=WP_016192413.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708948.1;locus_tag=LU631_RS25665;product=F0F1 ATP synthase subunit C;protein_id=WP_016192413.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4923129 4923947 . - . ID=gene-LU631_RS25670;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=LU631_RS25670;old_locus_tag=LU631_25670 NZ_CP089940.1 Protein Homology CDS 4923129 4923947 . - 0 ID=cds-WP_016192414.1;Parent=gene-LU631_RS25670;Dbxref=Genbank:WP_016192414.1;Name=WP_016192414.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004173675.1;locus_tag=LU631_RS25670;product=F0F1 ATP synthase subunit A;protein_id=WP_016192414.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4923956 4924336 . - . ID=gene-LU631_RS25675;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=LU631_RS25675;old_locus_tag=LU631_25675 NZ_CP089940.1 Protein Homology CDS 4923956 4924336 . - 0 ID=cds-WP_016192415.1;Parent=gene-LU631_RS25675;Dbxref=Genbank:WP_016192415.1;Name=WP_016192415.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161259.1;locus_tag=LU631_RS25675;product=F0F1 ATP synthase subunit I;protein_id=WP_016192415.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4925066 4925686 . - . ID=gene-LU631_RS25680;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=LU631_RS25680;old_locus_tag=LU631_25680 NZ_CP089940.1 Protein Homology CDS 4925066 4925686 . - 0 ID=cds-WP_016192416.1;Parent=gene-LU631_RS25680;Dbxref=Genbank:WP_016192416.1;Name=WP_016192416.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161260.1;locus_tag=LU631_RS25680;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_016192416.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4925765 4927654 . - . ID=gene-LU631_RS25685;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=LU631_RS25685;old_locus_tag=LU631_25685 NZ_CP089940.1 Protein Homology CDS 4925765 4927654 . - 0 ID=cds-WP_016192417.1;Parent=gene-LU631_RS25685;Dbxref=Genbank:WP_016192417.1;Name=WP_016192417.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=LU631_RS25685;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_016192417.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4928091 4928534 . - . ID=gene-LU631_RS25690;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=LU631_RS25690;old_locus_tag=LU631_25690 NZ_CP089940.1 Protein Homology CDS 4928091 4928534 . - 0 ID=cds-WP_016192418.1;Parent=gene-LU631_RS25690;Dbxref=Genbank:WP_016192418.1;Name=WP_016192418.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200041.1;locus_tag=LU631_RS25690;product=FMN-binding protein MioC;protein_id=WP_016192418.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4928872 4929303 . - . ID=gene-LU631_RS26265;Name=LU631_RS26265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26265 NZ_CP089940.1 Protein Homology CDS 4928872 4929303 . - 0 ID=cds-WP_046372013.1-10;Parent=gene-LU631_RS26265;Dbxref=Genbank:WP_046372013.1;Name=WP_046372013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26265;product=IS91 family transposase;protein_id=WP_046372013.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4929315 4930085 . - . ID=gene-LU631_RS26270;Name=LU631_RS26270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26270 NZ_CP089940.1 Protein Homology CDS 4929315 4930085 . - 0 ID=cds-WP_267921497.1-11;Parent=gene-LU631_RS26270;Dbxref=Genbank:WP_267921497.1;Name=WP_267921497.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26270;product=transposase zinc-binding domain-containing protein;protein_id=WP_267921497.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4930094 4930234 . - . ID=gene-LU631_RS25700;Name=LU631_RS25700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25700;old_locus_tag=LU631_25700 NZ_CP089940.1 GeneMarkS-2+ CDS 4930094 4930234 . - 0 ID=cds-WP_161796965.1-26;Parent=gene-LU631_RS25700;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS25700;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4930777 4931208 . - . ID=gene-LU631_RS26275;Name=LU631_RS26275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26275 NZ_CP089940.1 Protein Homology CDS 4930777 4931208 . - 0 ID=cds-WP_046372013.1-11;Parent=gene-LU631_RS26275;Dbxref=Genbank:WP_046372013.1;Name=WP_046372013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26275;product=IS91 family transposase;protein_id=WP_046372013.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4931220 4931990 . - . ID=gene-LU631_RS26280;Name=LU631_RS26280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26280 NZ_CP089940.1 Protein Homology CDS 4931220 4931990 . - 0 ID=cds-WP_267921497.1-12;Parent=gene-LU631_RS26280;Dbxref=Genbank:WP_267921497.1;Name=WP_267921497.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26280;product=transposase zinc-binding domain-containing protein;protein_id=WP_267921497.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4931999 4932334 . - . ID=gene-LU631_RS25710;Name=LU631_RS25710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25710;old_locus_tag=LU631_25710 NZ_CP089940.1 GeneMarkS-2+ CDS 4931999 4932334 . - 0 ID=cds-WP_052734695.1-15;Parent=gene-LU631_RS25710;Dbxref=Genbank:WP_052734695.1;Name=WP_052734695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS25710;product=hypothetical protein;protein_id=WP_052734695.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4932524 4933122 . + . ID=gene-LU631_RS25715;Name=LU631_RS25715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25715;old_locus_tag=LU631_25715;partial=true;pseudo=true;start_range=.,4932524 NZ_CP089940.1 Protein Homology CDS 4932524 4933122 . + 0 ID=cds-LU631_RS25715;Parent=gene-LU631_RS25715;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU631_RS25715;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,4932524;transl_table=11 NZ_CP089940.1 RefSeq gene 4933586 4934950 . - . ID=gene-LU631_RS25720;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=LU631_RS25720;old_locus_tag=LU631_25720 NZ_CP089940.1 Protein Homology CDS 4933586 4934950 . - 0 ID=cds-WP_016192419.1;Parent=gene-LU631_RS25720;Dbxref=Genbank:WP_016192419.1;Name=WP_016192419.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=LU631_RS25720;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_016192419.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4935032 4936675 . - . ID=gene-LU631_RS25725;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=LU631_RS25725;old_locus_tag=LU631_25725 NZ_CP089940.1 Protein Homology CDS 4935032 4936675 . - 0 ID=cds-WP_016192420.1;Parent=gene-LU631_RS25725;Dbxref=Genbank:WP_016192420.1;Name=WP_016192420.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849663.1;locus_tag=LU631_RS25725;product=membrane protein insertase YidC;protein_id=WP_016192420.1;transl_table=11 NZ_CP089940.1 RefSeq pseudogene 4936678 4936936 . - . ID=gene-LU631_RS25730;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=pseudogene;locus_tag=LU631_RS25730;old_locus_tag=LU631_25730;pseudo=true NZ_CP089940.1 Protein Homology CDS 4936678 4936936 . - 0 ID=cds-LU631_RS25730;Parent=gene-LU631_RS25730;Note=frameshifted;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=LU631_RS25730;product=membrane protein insertion efficiency factor YidD;pseudo=true;transl_table=11 NZ_CP089940.1 RefSeq gene 4936900 4937259 . - . ID=gene-LU631_RS25735;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=LU631_RS25735;old_locus_tag=LU631_25735 NZ_CP089940.1 Protein Homology CDS 4936900 4937259 . - 0 ID=cds-WP_016192422.1;Parent=gene-LU631_RS25735;Dbxref=Genbank:WP_016192422.1;Name=WP_016192422.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=LU631_RS25735;product=ribonuclease P protein component;protein_id=WP_016192422.1;transl_table=11 NZ_CP089940.1 RefSeq gene 4937277 4937417 . - . ID=gene-LU631_RS25740;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=LU631_RS25740;old_locus_tag=LU631_25740 NZ_CP089940.1 Protein Homology CDS 4937277 4937417 . - 0 ID=cds-WP_016192423.1;Parent=gene-LU631_RS25740;Dbxref=Genbank:WP_016192423.1;Name=WP_016192423.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=LU631_RS25740;product=50S ribosomal protein L34;protein_id=WP_016192423.1;transl_table=11 ##sequence-region NZ_CP089941.1 1 40835 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=65700 NZ_CP089941.1 RefSeq region 1 40835 . + . ID=NZ_CP089941.1:1..40835;Dbxref=taxon:65700;Is_circular=true;Name=pETR004-c;collection-date=2009;country=USA: Pennsylvania;gbkey=Src;genome=plasmid;isolation-source=Infected wild plant;mol_type=genomic DNA;nat-host=Cucurbita pepo ssp. texana;plasmid-name=pETR004-c;strain=BuffGH NZ_CP089941.1 RefSeq gene 1 864 . + . ID=gene-LU631_RS25745;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=LU631_RS25745;old_locus_tag=LU631_25745 NZ_CP089941.1 Protein Homology CDS 1 864 . + 0 ID=cds-WP_016193194.1;Parent=gene-LU631_RS25745;Dbxref=Genbank:WP_016193194.1;Name=WP_016193194.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002225475.1;locus_tag=LU631_RS25745;product=incFII family plasmid replication initiator RepA;protein_id=WP_016193194.1;transl_table=11 NZ_CP089941.1 RefSeq gene 2028 2678 . + . ID=gene-LU631_RS25750;Name=LU631_RS25750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25750;old_locus_tag=LU631_25750 NZ_CP089941.1 Protein Homology CDS 2028 2678 . + 0 ID=cds-WP_016193196.1;Parent=gene-LU631_RS25750;Dbxref=Genbank:WP_016193196.1;Name=WP_016193196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012592917.1;locus_tag=LU631_RS25750;product=AAA family ATPase;protein_id=WP_016193196.1;transl_table=11 NZ_CP089941.1 RefSeq gene 2718 2999 . + . ID=gene-LU631_RS25755;Name=LU631_RS25755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25755;old_locus_tag=LU631_25755 NZ_CP089941.1 Protein Homology CDS 2718 2999 . + 0 ID=cds-WP_016193197.1;Parent=gene-LU631_RS25755;Dbxref=Genbank:WP_016193197.1;Name=WP_016193197.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013561.2;locus_tag=LU631_RS25755;product=ribbon-helix-helix domain-containing protein;protein_id=WP_016193197.1;transl_table=11 NZ_CP089941.1 RefSeq gene 3416 3757 . - . ID=gene-LU631_RS25760;Name=LU631_RS25760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25760;old_locus_tag=LU631_25760 NZ_CP089941.1 Protein Homology CDS 3416 3757 . - 0 ID=cds-WP_233482035.1;Parent=gene-LU631_RS25760;Dbxref=Genbank:WP_233482035.1;Name=WP_233482035.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS25760;product=hypothetical protein;protein_id=WP_233482035.1;transl_table=11 NZ_CP089941.1 RefSeq gene 3888 4319 . - . ID=gene-LU631_RS26285;Name=LU631_RS26285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26285 NZ_CP089941.1 Protein Homology CDS 3888 4319 . - 0 ID=cds-WP_046372013.1-12;Parent=gene-LU631_RS26285;Dbxref=Genbank:WP_046372013.1;Name=WP_046372013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26285;product=IS91 family transposase;protein_id=WP_046372013.1;transl_table=11 NZ_CP089941.1 RefSeq gene 4331 5101 . - . ID=gene-LU631_RS26290;Name=LU631_RS26290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS26290 NZ_CP089941.1 Protein Homology CDS 4331 5101 . - 0 ID=cds-WP_267921497.1-13;Parent=gene-LU631_RS26290;Dbxref=Genbank:WP_267921497.1;Name=WP_267921497.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU631_RS26290;product=transposase zinc-binding domain-containing protein;protein_id=WP_267921497.1;transl_table=11 NZ_CP089941.1 RefSeq gene 5110 5445 . - . ID=gene-LU631_RS25770;Name=LU631_RS25770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25770;old_locus_tag=LU631_25770 NZ_CP089941.1 GeneMarkS-2+ CDS 5110 5445 . - 0 ID=cds-WP_052734695.1-16;Parent=gene-LU631_RS25770;Dbxref=Genbank:WP_052734695.1;Name=WP_052734695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS25770;product=hypothetical protein;protein_id=WP_052734695.1;transl_table=11 NZ_CP089941.1 RefSeq gene 5550 6536 . - . ID=gene-LU631_RS25775;Name=LU631_RS25775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25775;old_locus_tag=LU631_25775 NZ_CP089941.1 Protein Homology CDS 5550 6536 . - 0 ID=cds-WP_233482036.1;Parent=gene-LU631_RS25775;Dbxref=Genbank:WP_233482036.1;Name=WP_233482036.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU631_RS25775;product=IS91 family transposase;protein_id=WP_233482036.1;transl_table=11 NZ_CP089941.1 RefSeq gene 6545 6685 . - . ID=gene-LU631_RS25780;Name=LU631_RS25780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25780;old_locus_tag=LU631_25780 NZ_CP089941.1 GeneMarkS-2+ CDS 6545 6685 . - 0 ID=cds-WP_161796965.1-27;Parent=gene-LU631_RS25780;Dbxref=Genbank:WP_161796965.1;Name=WP_161796965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS25780;product=hypothetical protein;protein_id=WP_161796965.1;transl_table=11 NZ_CP089941.1 RefSeq gene 7249 9960 . + . ID=gene-LU631_RS25785;Name=LU631_RS25785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25785;old_locus_tag=LU631_25785 NZ_CP089941.1 GeneMarkS-2+ CDS 7249 9960 . + 0 ID=cds-WP_016193170.1;Parent=gene-LU631_RS25785;Dbxref=Genbank:WP_016193170.1;Name=WP_016193170.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS25785;product=hypothetical protein;protein_id=WP_016193170.1;transl_table=11 NZ_CP089941.1 RefSeq gene 10041 10232 . + . ID=gene-LU631_RS25790;Name=LU631_RS25790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25790;old_locus_tag=LU631_25790 NZ_CP089941.1 GeneMarkS-2+ CDS 10041 10232 . + 0 ID=cds-WP_016193171.1;Parent=gene-LU631_RS25790;Dbxref=Genbank:WP_016193171.1;Name=WP_016193171.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS25790;product=IS3 family transposase;protein_id=WP_016193171.1;transl_table=11 NZ_CP089941.1 RefSeq gene 10690 10950 . + . ID=gene-LU631_RS25795;Name=LU631_RS25795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25795;old_locus_tag=LU631_25795 NZ_CP089941.1 Protein Homology CDS 10690 10950 . + 0 ID=cds-WP_016193173.1;Parent=gene-LU631_RS25795;Dbxref=Genbank:WP_016193173.1;Name=WP_016193173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000510385.1;locus_tag=LU631_RS25795;product=hypothetical protein;protein_id=WP_016193173.1;transl_table=11 NZ_CP089941.1 RefSeq gene 11237 11473 . + . ID=gene-LU631_RS25800;Name=LU631_RS25800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25800;old_locus_tag=LU631_25800 NZ_CP089941.1 Protein Homology CDS 11237 11473 . + 0 ID=cds-WP_016193174.1;Parent=gene-LU631_RS25800;Dbxref=Genbank:WP_016193174.1;Name=WP_016193174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001361845.1;locus_tag=LU631_RS25800;product=hypothetical protein;protein_id=WP_016193174.1;transl_table=11 NZ_CP089941.1 RefSeq gene 11632 12672 . + . ID=gene-LU631_RS25805;Name=LU631_RS25805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25805;old_locus_tag=LU631_25805 NZ_CP089941.1 Protein Homology CDS 11632 12672 . + 0 ID=cds-WP_046372128.1-2;Parent=gene-LU631_RS25805;Dbxref=Genbank:WP_046372128.1;Name=WP_046372128.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS25805;product=IS481 family transposase;protein_id=WP_046372128.1;transl_table=11 NZ_CP089941.1 RefSeq gene 12868 13515 . - . ID=gene-LU631_RS25810;Name=LU631_RS25810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25810;old_locus_tag=LU631_25810 NZ_CP089941.1 Protein Homology CDS 12868 13515 . - 0 ID=cds-WP_015256836.1;Parent=gene-LU631_RS25810;Dbxref=Genbank:WP_015256836.1;Name=WP_015256836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549893.1;locus_tag=LU631_RS25810;product=recombinase family protein;protein_id=WP_015256836.1;transl_table=11 NZ_CP089941.1 RefSeq gene 13749 14084 . + . ID=gene-LU631_RS25815;Name=LU631_RS25815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25815;old_locus_tag=LU631_25815 NZ_CP089941.1 Protein Homology CDS 13749 14084 . + 0 ID=cds-WP_046372428.1;Parent=gene-LU631_RS25815;Dbxref=Genbank:WP_046372428.1;Name=WP_046372428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026069.1;locus_tag=LU631_RS25815;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_046372428.1;transl_table=11 NZ_CP089941.1 RefSeq gene 14081 14437 . + . ID=gene-LU631_RS25820;Name=LU631_RS25820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25820;old_locus_tag=LU631_25820 NZ_CP089941.1 Protein Homology CDS 14081 14437 . + 0 ID=cds-WP_006122339.1-2;Parent=gene-LU631_RS25820;Dbxref=Genbank:WP_006122339.1;Name=WP_006122339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000127484.1;locus_tag=LU631_RS25820;product=hypothetical protein;protein_id=WP_006122339.1;transl_table=11 NZ_CP089941.1 RefSeq gene 15220 15558 . + . ID=gene-LU631_RS25825;Name=LU631_RS25825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25825;old_locus_tag=LU631_25825 NZ_CP089941.1 GeneMarkS-2+ CDS 15220 15558 . + 0 ID=cds-WP_016193175.1;Parent=gene-LU631_RS25825;Dbxref=Genbank:WP_016193175.1;Name=WP_016193175.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS25825;product=hypothetical protein;protein_id=WP_016193175.1;transl_table=11 NZ_CP089941.1 RefSeq gene 15799 16359 . + . ID=gene-LU631_RS25830;Name=LU631_RS25830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25830;old_locus_tag=LU631_25830 NZ_CP089941.1 Protein Homology CDS 15799 16359 . + 0 ID=cds-WP_016193176.1;Parent=gene-LU631_RS25830;Dbxref=Genbank:WP_016193176.1;Name=WP_016193176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490535.1;locus_tag=LU631_RS25830;product=recombinase family protein;protein_id=WP_016193176.1;transl_table=11 NZ_CP089941.1 RefSeq gene 16343 18007 . + . ID=gene-LU631_RS25835;Name=LU631_RS25835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25835;old_locus_tag=LU631_25835 NZ_CP089941.1 Protein Homology CDS 16343 18007 . + 0 ID=cds-WP_016193177.1;Parent=gene-LU631_RS25835;Dbxref=Genbank:WP_016193177.1;Name=WP_016193177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490534.1;locus_tag=LU631_RS25835;product=IS481 family transposase;protein_id=WP_016193177.1;transl_table=11 NZ_CP089941.1 RefSeq gene 17940 18965 . + . ID=gene-LU631_RS25840;Name=LU631_RS25840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25840;old_locus_tag=LU631_25840 NZ_CP089941.1 Protein Homology CDS 17940 18965 . + 0 ID=cds-WP_087949743.1;Parent=gene-LU631_RS25840;Dbxref=Genbank:WP_087949743.1;Name=WP_087949743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490533.1;locus_tag=LU631_RS25840;product=ExeA family protein;protein_id=WP_087949743.1;transl_table=11 NZ_CP089941.1 RefSeq gene 19103 19405 . + . ID=gene-LU631_RS25845;Name=LU631_RS25845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25845;old_locus_tag=LU631_25845 NZ_CP089941.1 Protein Homology CDS 19103 19405 . + 0 ID=cds-WP_016193179.1;Parent=gene-LU631_RS25845;Dbxref=Genbank:WP_016193179.1;Name=WP_016193179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322723.1;locus_tag=LU631_RS25845;product=hypothetical protein;protein_id=WP_016193179.1;transl_table=11 NZ_CP089941.1 RefSeq gene 19457 19651 . + . ID=gene-LU631_RS25850;Name=LU631_RS25850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25850;old_locus_tag=LU631_25850 NZ_CP089941.1 Protein Homology CDS 19457 19651 . + 0 ID=cds-WP_016193180.1;Parent=gene-LU631_RS25850;Dbxref=Genbank:WP_016193180.1;Name=WP_016193180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122357.1;locus_tag=LU631_RS25850;product=hypothetical protein;protein_id=WP_016193180.1;transl_table=11 NZ_CP089941.1 RefSeq gene 19648 19854 . + . ID=gene-LU631_RS25855;Name=LU631_RS25855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25855;old_locus_tag=LU631_25855 NZ_CP089941.1 GeneMarkS-2+ CDS 19648 19854 . + 0 ID=cds-WP_016193181.1;Parent=gene-LU631_RS25855;Dbxref=Genbank:WP_016193181.1;Name=WP_016193181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU631_RS25855;product=hypothetical protein;protein_id=WP_016193181.1;transl_table=11 NZ_CP089941.1 RefSeq gene 19959 20999 . + . ID=gene-LU631_RS25860;Name=LU631_RS25860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25860;old_locus_tag=LU631_25860 NZ_CP089941.1 Protein Homology CDS 19959 20999 . + 0 ID=cds-WP_046372128.1-3;Parent=gene-LU631_RS25860;Dbxref=Genbank:WP_046372128.1;Name=WP_046372128.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU631_RS25860;product=IS481 family transposase;protein_id=WP_046372128.1;transl_table=11 NZ_CP089941.1 RefSeq gene 21565 21972 . + . ID=gene-LU631_RS25865;Name=LU631_RS25865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25865;old_locus_tag=LU631_25865 NZ_CP089941.1 Protein Homology CDS 21565 21972 . + 0 ID=cds-WP_016193182.1;Parent=gene-LU631_RS25865;Dbxref=Genbank:WP_016193182.1;Name=WP_016193182.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017105.2;locus_tag=LU631_RS25865;product=relaxosome protein TraM;protein_id=WP_016193182.1;transl_table=11 NZ_CP089941.1 RefSeq pseudogene 22123 23332 . - . ID=gene-LU631_RS25870;Name=LU631_RS25870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25870;old_locus_tag=LU631_25870;pseudo=true NZ_CP089941.1 Protein Homology CDS 22123 23332 . - 0 ID=cds-LU631_RS25870;Parent=gene-LU631_RS25870;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU631_RS25870;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089941.1 RefSeq gene 23525 23992 . + . ID=gene-LU631_RS25875;Name=LU631_RS25875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25875;old_locus_tag=LU631_25875 NZ_CP089941.1 Protein Homology CDS 23525 23992 . + 0 ID=cds-WP_016193183.1;Parent=gene-LU631_RS25875;Dbxref=Genbank:WP_016193183.1;Name=WP_016193183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131847.1;locus_tag=LU631_RS25875;product=lytic transglycosylase domain-containing protein;protein_id=WP_016193183.1;transl_table=11 NZ_CP089941.1 RefSeq gene 24014 26161 . + . ID=gene-LU631_RS25880;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=LU631_RS25880;old_locus_tag=LU631_25880 NZ_CP089941.1 Protein Homology CDS 24014 26161 . + 0 ID=cds-WP_016193184.1;Parent=gene-LU631_RS25880;Dbxref=Genbank:WP_016193184.1;Name=WP_016193184.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001568075.1;locus_tag=LU631_RS25880;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_016193184.1;transl_table=11 NZ_CP089941.1 RefSeq gene 26161 28026 . + . ID=gene-LU631_RS25885;Name=LU631_RS25885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25885;old_locus_tag=LU631_25885 NZ_CP089941.1 Protein Homology CDS 26161 28026 . + 0 ID=cds-WP_016193185.1;Parent=gene-LU631_RS25885;Dbxref=Genbank:WP_016193185.1;Name=WP_016193185.1;Ontology_term=GO:0006259,GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: protein motif:HMM:TIGR02686.1;locus_tag=LU631_RS25885;product=conjugative relaxase;protein_id=WP_016193185.1;transl_table=11 NZ_CP089941.1 RefSeq gene 28051 31056 . - . ID=gene-LU631_RS25890;Name=LU631_RS25890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25890;old_locus_tag=LU631_25890 NZ_CP089941.1 Protein Homology CDS 28051 31056 . - 0 ID=cds-WP_016193186.1;Parent=gene-LU631_RS25890;Dbxref=Genbank:WP_016193186.1;Name=WP_016193186.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495017.1;locus_tag=LU631_RS25890;product=Tn3 family transposase;protein_id=WP_016193186.1;transl_table=11 NZ_CP089941.1 RefSeq gene 31220 31798 . + . ID=gene-LU631_RS25895;Name=LU631_RS25895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25895;old_locus_tag=LU631_25895 NZ_CP089941.1 Protein Homology CDS 31220 31798 . + 0 ID=cds-WP_016193187.1;Parent=gene-LU631_RS25895;Dbxref=Genbank:WP_016193187.1;Name=WP_016193187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937746.1;locus_tag=LU631_RS25895;product=recombinase family protein;protein_id=WP_016193187.1;transl_table=11 NZ_CP089941.1 RefSeq gene 31908 35216 . + . ID=gene-LU631_RS25900;Name=LU631_RS25900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25900;old_locus_tag=LU631_25900 NZ_CP089941.1 Protein Homology CDS 31908 35216 . + 0 ID=cds-WP_016193188.1;Parent=gene-LU631_RS25900;Dbxref=Genbank:WP_016193188.1;Name=WP_016193188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192563.1;locus_tag=LU631_RS25900;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_016193188.1;transl_table=11 NZ_CP089941.1 RefSeq pseudogene 35496 36962 . + . ID=gene-LU631_RS25905;Name=LU631_RS25905;end_range=36962,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU631_RS25905;old_locus_tag=LU631_25905;partial=true;pseudo=true NZ_CP089941.1 Protein Homology CDS 35496 36962 . + 0 ID=cds-LU631_RS25905;Parent=gene-LU631_RS25905;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=36962,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024991.2;locus_tag=LU631_RS25905;partial=true;product=AAA family ATPase;pseudo=true;transl_table=11 NZ_CP089941.1 RefSeq gene 37803 38792 . + . ID=gene-LU631_RS25910;Name=LU631_RS25910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25910;old_locus_tag=LU631_25910 NZ_CP089941.1 Protein Homology CDS 37803 38792 . + 0 ID=cds-WP_232426940.1;Parent=gene-LU631_RS25910;Dbxref=Genbank:WP_232426940.1;Name=WP_232426940.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: protein motif:HMM:NF018726.2;locus_tag=LU631_RS25910;product=conjugative transfer relaxase/helicase TraI;protein_id=WP_232426940.1;transl_table=11 NZ_CP089941.1 RefSeq gene 38802 39407 . - . ID=gene-LU631_RS25915;Name=LU631_RS25915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25915;old_locus_tag=LU631_25915 NZ_CP089941.1 Protein Homology CDS 38802 39407 . - 0 ID=cds-WP_016193191.1;Parent=gene-LU631_RS25915;Dbxref=Genbank:WP_016193191.1;Name=WP_016193191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193191.1;locus_tag=LU631_RS25915;product=DUF2913 family protein;protein_id=WP_016193191.1;transl_table=11 NZ_CP089941.1 RefSeq gene 39574 40137 . + . ID=gene-LU631_RS25920;Name=LU631_RS25920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU631_RS25920;old_locus_tag=LU631_25920 NZ_CP089941.1 Protein Homology CDS 39574 40137 . + 0 ID=cds-WP_040465936.1;Parent=gene-LU631_RS25920;Dbxref=Genbank:WP_040465936.1;Name=WP_040465936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008324931.1;locus_tag=LU631_RS25920;product=phospholipase D family protein;protein_id=WP_040465936.1;transl_table=11 NZ_CP089941.1 RefSeq gene 40284 40529 . + . ID=gene-LU631_RS25925;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=LU631_RS25925;old_locus_tag=LU631_25925 NZ_CP089941.1 Protein Homology CDS 40284 40529 . + 0 ID=cds-WP_016193193.1;Parent=gene-LU631_RS25925;Dbxref=Genbank:WP_016193193.1;Name=WP_016193193.1;gbkey=CDS;gene=repA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001485405.1;locus_tag=LU631_RS25925;product=replication regulatory protein RepA;protein_id=WP_016193193.1;transl_table=11 ###