##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2136553v1 #!genome-build-accession NCBI_Assembly:GCF_021365535.1 #!annotation-date 12/08/2022 10:45:40 #!annotation-source NCBI RefSeq ##sequence-region NZ_CP089942.1 1 4874086 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=65700 NZ_CP089942.1 RefSeq region 1 4874086 . + . ID=NZ_CP089942.1:1..4874086;Dbxref=taxon:65700;Is_circular=true;Name=ANONYMOUS;collection-date=2010;country=USA: Maryland;gbkey=Src;genome=chromosome;isolation-source=Infected agricultural plant;mol_type=genomic DNA;nat-host=Cucumis sativus;strain=MDCuke NZ_CP089942.1 RefSeq gene 1 1392 . + . ID=gene-LU604_RS00005;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=LU604_RS00005;old_locus_tag=LU604_00005 NZ_CP089942.1 Protein Homology CDS 1 1392 . + 0 ID=cds-WP_016192425.1;Parent=gene-LU604_RS00005;Dbxref=Genbank:WP_016192425.1;Name=WP_016192425.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161180.1;locus_tag=LU604_RS00005;product=chromosomal replication initiator protein DnaA;protein_id=WP_016192425.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1397 2497 . + . ID=gene-LU604_RS00010;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=LU604_RS00010;old_locus_tag=LU604_00010 NZ_CP089942.1 Protein Homology CDS 1397 2497 . + 0 ID=cds-WP_233479604.1;Parent=gene-LU604_RS00010;Dbxref=Genbank:WP_233479604.1;Name=WP_233479604.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=LU604_RS00010;product=DNA polymerase III subunit beta;protein_id=WP_233479604.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2649 3734 . + . ID=gene-LU604_RS00015;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=LU604_RS00015;old_locus_tag=LU604_00015 NZ_CP089942.1 Protein Homology CDS 2649 3734 . + 0 ID=cds-WP_016192427.1;Parent=gene-LU604_RS00015;Dbxref=Genbank:WP_016192427.1;Name=WP_016192427.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875688.1;locus_tag=LU604_RS00015;product=DNA replication/repair protein RecF;protein_id=WP_016192427.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3753 6158 . + . ID=gene-LU604_RS00020;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=LU604_RS00020;old_locus_tag=LU604_00020 NZ_CP089942.1 Protein Homology CDS 3753 6158 . + 0 ID=cds-WP_233479605.1;Parent=gene-LU604_RS00020;Dbxref=Genbank:WP_233479605.1;Name=WP_233479605.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=LU604_RS00020;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_233479605.1;transl_table=11 NZ_CP089942.1 RefSeq gene 6423 7019 . - . ID=gene-LU604_RS00025;Name=LU604_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00025;old_locus_tag=LU604_00025 NZ_CP089942.1 Protein Homology CDS 6423 7019 . - 0 ID=cds-WP_157275262.1;Parent=gene-LU604_RS00025;Dbxref=Genbank:WP_157275262.1;Name=WP_157275262.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.2;locus_tag=LU604_RS00025;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_157275262.1;transl_table=11 NZ_CP089942.1 RefSeq gene 7342 8151 . + . ID=gene-LU604_RS00030;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=LU604_RS00030;old_locus_tag=LU604_00030 NZ_CP089942.1 Protein Homology CDS 7342 8151 . + 0 ID=cds-WP_016192430.1;Parent=gene-LU604_RS00030;Dbxref=Genbank:WP_016192430.1;Name=WP_016192430.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443118.1;locus_tag=LU604_RS00030;product=sugar-phosphatase;protein_id=WP_016192430.1;transl_table=11 NZ_CP089942.1 RefSeq gene 8261 9532 . + . ID=gene-LU604_RS00035;Name=LU604_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00035;old_locus_tag=LU604_00035 NZ_CP089942.1 Protein Homology CDS 8261 9532 . + 0 ID=cds-WP_016192431.1;Parent=gene-LU604_RS00035;Dbxref=Genbank:WP_016192431.1;Name=WP_016192431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013507209.1;locus_tag=LU604_RS00035;product=DUF3748 domain-containing protein;protein_id=WP_016192431.1;transl_table=11 NZ_CP089942.1 RefSeq gene 9529 9900 . - . ID=gene-LU604_RS00040;Name=LU604_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00040;old_locus_tag=LU604_00040 NZ_CP089942.1 Protein Homology CDS 9529 9900 . - 0 ID=cds-WP_016192432.1;Parent=gene-LU604_RS00040;Dbxref=Genbank:WP_016192432.1;Name=WP_016192432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443116.1;locus_tag=LU604_RS00040;product=YceK/YidQ family lipoprotein;protein_id=WP_016192432.1;transl_table=11 NZ_CP089942.1 RefSeq gene 10200 10616 . + . ID=gene-LU604_RS00045;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=LU604_RS00045;old_locus_tag=LU604_00045 NZ_CP089942.1 Protein Homology CDS 10200 10616 . + 0 ID=cds-WP_016192433.1;Parent=gene-LU604_RS00045;Dbxref=Genbank:WP_016192433.1;Name=WP_016192433.1;gbkey=CDS;gene=ibpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010617843.1;locus_tag=LU604_RS00045;product=heat shock chaperone IbpA;protein_id=WP_016192433.1;transl_table=11 NZ_CP089942.1 RefSeq gene 10744 10977 . - . ID=gene-LU604_RS00050;Name=LU604_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00050;old_locus_tag=LU604_00050 NZ_CP089942.1 GeneMarkS-2+ CDS 10744 10977 . - 0 ID=cds-WP_016192434.1;Parent=gene-LU604_RS00050;Dbxref=Genbank:WP_016192434.1;Name=WP_016192434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS00050;product=hypothetical protein;protein_id=WP_016192434.1;transl_table=11 NZ_CP089942.1 RefSeq gene 11018 12268 . - . ID=gene-LU604_RS00055;Name=LU604_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00055;old_locus_tag=LU604_00055 NZ_CP089942.1 Protein Homology CDS 11018 12268 . - 0 ID=cds-WP_016192435.1;Parent=gene-LU604_RS00055;Dbxref=Genbank:WP_016192435.1;Name=WP_016192435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161159.1;locus_tag=LU604_RS00055;product=valine--pyruvate transaminase;protein_id=WP_016192435.1;transl_table=11 NZ_CP089942.1 RefSeq gene 12621 13382 . + . ID=gene-LU604_RS00060;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=LU604_RS00060;old_locus_tag=LU604_00060 NZ_CP089942.1 Protein Homology CDS 12621 13382 . + 0 ID=cds-WP_016192436.1;Parent=gene-LU604_RS00060;Dbxref=Genbank:WP_016192436.1;Name=WP_016192436.1;Ontology_term=GO:0000272,GO:0008678,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=2-deoxy-D-gluconate 3-dehydrogenase activity|0008678||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228631.1;locus_tag=LU604_RS00060;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_016192436.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 13473 14210 . - . ID=gene-LU604_RS00065;Name=LU604_RS00065;end_range=14210,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00065;old_locus_tag=LU604_00065;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 13473 14210 . - 0 ID=cds-LU604_RS00065;Parent=gene-LU604_RS00065;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0051287;end_range=14210,.;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004530.1;locus_tag=LU604_RS00065;partial=true;product=NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 14284 14787 . - . ID=gene-LU604_RS00070;Name=LU604_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00070;old_locus_tag=LU604_00070 NZ_CP089942.1 GeneMarkS-2+ CDS 14284 14787 . - 0 ID=cds-WP_233479606.1;Parent=gene-LU604_RS00070;Dbxref=Genbank:WP_233479606.1;Name=WP_233479606.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS00070;product=hypothetical protein;protein_id=WP_233479606.1;transl_table=11 NZ_CP089942.1 RefSeq gene 14931 15956 . - . ID=gene-LU604_RS00075;Name=LU604_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00075;old_locus_tag=LU604_00075 NZ_CP089942.1 Protein Homology CDS 14931 15956 . - 0 ID=cds-WP_233479607.1;Parent=gene-LU604_RS00075;Dbxref=Genbank:WP_233479607.1;Name=WP_233479607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542809.1;locus_tag=LU604_RS00075;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_233479607.1;transl_table=11 NZ_CP089942.1 RefSeq gene 16100 16663 . - . ID=gene-LU604_RS00080;Name=LU604_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00080;old_locus_tag=LU604_00080 NZ_CP089942.1 Protein Homology CDS 16100 16663 . - 0 ID=cds-WP_016193058.1;Parent=gene-LU604_RS00080;Dbxref=Genbank:WP_016193058.1;Name=WP_016193058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369225.1;locus_tag=LU604_RS00080;product=DNA-3-methyladenine glycosylase I;protein_id=WP_016193058.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 16748 17327 . - . ID=gene-LU604_RS00085;Name=LU604_RS00085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00085;old_locus_tag=LU604_00085;pseudo=true NZ_CP089942.1 Protein Homology CDS 16748 17327 . - 0 ID=cds-LU604_RS00085;Parent=gene-LU604_RS00085;Note=frameshifted%3B internal stop;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359615.1;locus_tag=LU604_RS00085;product=glutathione S-transferase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 17386 18306 . - . ID=gene-LU604_RS00090;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=LU604_RS00090;old_locus_tag=LU604_00090 NZ_CP089942.1 Protein Homology CDS 17386 18306 . - 0 ID=cds-WP_233479608.1;Parent=gene-LU604_RS00090;Dbxref=Genbank:WP_233479608.1;Name=WP_233479608.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359616.1;locus_tag=LU604_RS00090;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_233479608.1;transl_table=11 NZ_CP089942.1 RefSeq gene 18587 19396 . + . ID=gene-LU604_RS00095;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=LU604_RS00095;old_locus_tag=LU604_00095 NZ_CP089942.1 Protein Homology CDS 18587 19396 . + 0 ID=cds-WP_233481450.1;Parent=gene-LU604_RS00095;Dbxref=Genbank:WP_233481450.1;Name=WP_233481450.1;Ontology_term=GO:0009061,GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378311.1;locus_tag=LU604_RS00095;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_233481450.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 19405 20180 . - . ID=gene-LU604_RS00100;Name=LU604_RS00100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00100;old_locus_tag=LU604_00100;pseudo=true NZ_CP089942.1 Protein Homology CDS 19405 20180 . - 0 ID=cds-LU604_RS00100;Parent=gene-LU604_RS00100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193053.1;locus_tag=LU604_RS00100;product=DeoR/GlpR family DNA-binding transcription regulator;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 20352 21588 . + . ID=gene-LU604_RS00105;Name=LU604_RS00105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00105;old_locus_tag=LU604_00105;pseudo=true NZ_CP089942.1 Protein Homology CDS 20352 21588 . + 0 ID=cds-LU604_RS00105;Parent=gene-LU604_RS00105;Note=frameshifted;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542802.1;locus_tag=LU604_RS00105;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 21635 22069 . - . ID=gene-LU604_RS00110;Name=LU604_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00110;old_locus_tag=LU604_00110 NZ_CP089942.1 GeneMarkS-2+ CDS 21635 22069 . - 0 ID=cds-WP_016193052.1;Parent=gene-LU604_RS00110;Dbxref=Genbank:WP_016193052.1;Name=WP_016193052.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS00110;product=hypothetical protein;protein_id=WP_016193052.1;transl_table=11 NZ_CP089942.1 RefSeq gene 22177 23232 . + . ID=gene-LU604_RS00115;Name=LU604_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00115;old_locus_tag=LU604_00115 NZ_CP089942.1 Protein Homology CDS 22177 23232 . + 0 ID=cds-WP_233479609.1;Parent=gene-LU604_RS00115;Dbxref=Genbank:WP_233479609.1;Name=WP_233479609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007890103.1;locus_tag=LU604_RS00115;product=acyltransferase;protein_id=WP_233479609.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 23281 23382 . - . ID=gene-LU604_RS00120;Name=LU604_RS00120;end_range=23382,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00120;old_locus_tag=LU604_00120;partial=true;pseudo=true;start_range=.,23281 NZ_CP089942.1 Protein Homology CDS 23281 23382 . - 0 ID=cds-LU604_RS00120;Parent=gene-LU604_RS00120;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=23382,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007921764.1;locus_tag=LU604_RS00120;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,23281;transl_table=11 NZ_CP089942.1 RefSeq gene 23518 24135 . + . ID=gene-LU604_RS00125;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=LU604_RS00125;old_locus_tag=LU604_00125 NZ_CP089942.1 Protein Homology CDS 23518 24135 . + 0 ID=cds-WP_016193050.1;Parent=gene-LU604_RS00125;Dbxref=Genbank:WP_016193050.1;Name=WP_016193050.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462936.1;locus_tag=LU604_RS00125;product=superoxide dismutase [Mn];protein_id=WP_016193050.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 24396 25388 . + . ID=gene-LU604_RS00130;Name=LU604_RS00130;end_range=25388,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00130;old_locus_tag=LU604_00130;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 24396 25388 . + 0 ID=cds-LU604_RS00130;Parent=gene-LU604_RS00130;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;end_range=25388,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443097.1;locus_tag=LU604_RS00130;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 25387 25749 . - . ID=gene-LU604_RS00135;Name=LU604_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00135;old_locus_tag=LU604_00135 NZ_CP089942.1 Protein Homology CDS 25387 25749 . - 0 ID=cds-WP_016193047.1;Parent=gene-LU604_RS00135;Dbxref=Genbank:WP_016193047.1;Name=WP_016193047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161101.1;locus_tag=LU604_RS00135;product=YibL family ribosome-associated protein;protein_id=WP_016193047.1;transl_table=11 NZ_CP089942.1 RefSeq gene 25821 26345 . - . ID=gene-LU604_RS00140;Name=LU604_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00140;old_locus_tag=LU604_00140 NZ_CP089942.1 Protein Homology CDS 25821 26345 . - 0 ID=cds-WP_016193046.1;Parent=gene-LU604_RS00140;Dbxref=Genbank:WP_016193046.1;Name=WP_016193046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121396.1;locus_tag=LU604_RS00140;product=MltR family transcriptional regulator;protein_id=WP_016193046.1;transl_table=11 NZ_CP089942.1 RefSeq gene 26445 27590 . - . ID=gene-LU604_RS00145;Name=LU604_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00145;old_locus_tag=LU604_00145 NZ_CP089942.1 Protein Homology CDS 26445 27590 . - 0 ID=cds-WP_233479610.1;Parent=gene-LU604_RS00145;Dbxref=Genbank:WP_233479610.1;Name=WP_233479610.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848038.1;locus_tag=LU604_RS00145;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_233479610.1;transl_table=11 NZ_CP089942.1 RefSeq gene 27684 29603 . - . ID=gene-LU604_RS00150;Name=LU604_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00150;old_locus_tag=LU604_00150 NZ_CP089942.1 Protein Homology CDS 27684 29603 . - 0 ID=cds-WP_016193044.1;Parent=gene-LU604_RS00150;Dbxref=Genbank:WP_016193044.1;Name=WP_016193044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204522.1;locus_tag=LU604_RS00150;product=PTS mannitol transporter subunit IICBA;protein_id=WP_016193044.1;transl_table=11 NZ_CP089942.1 RefSeq gene 30055 30264 . - . ID=gene-LU604_RS26865;Name=LU604_RS26865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26865 NZ_CP089942.1 Protein Homology CDS 30055 30264 . - 0 ID=cds-WP_252120247.1;Parent=gene-LU604_RS26865;Dbxref=Genbank:WP_252120247.1;Name=WP_252120247.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017866.2;locus_tag=LU604_RS26865;product=DUF943 family protein;protein_id=WP_252120247.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 30463 31238 . - . ID=gene-LU604_RS00160;Name=LU604_RS00160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00160;old_locus_tag=LU604_00160;partial=true;pseudo=true;start_range=.,30463 NZ_CP089942.1 Protein Homology CDS 30463 31238 . - 0 ID=cds-LU604_RS00160;Parent=gene-LU604_RS00160;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS00160;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,30463;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 31278 31967 . - . ID=gene-LU604_RS00165;Name=LU604_RS00165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00165;old_locus_tag=LU604_00165;pseudo=true NZ_CP089942.1 Protein Homology CDS 31278 31967 . - 0 ID=cds-LU604_RS00165;Parent=gene-LU604_RS00165;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=LU604_RS00165;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 32059 32640 . + . ID=gene-LU604_RS00170;Name=LU604_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00170;old_locus_tag=LU604_00170 NZ_CP089942.1 GeneMarkS-2+ CDS 32059 32640 . + 0 ID=cds-WP_233479611.1;Parent=gene-LU604_RS00170;Dbxref=Genbank:WP_233479611.1;Name=WP_233479611.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS00170;product=hypothetical protein;protein_id=WP_233479611.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 32730 33211 . - . ID=gene-LU604_RS00175;Name=LU604_RS00175;end_range=33211,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00175;old_locus_tag=LU604_00175;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 32730 33211 . - 0 ID=cds-LU604_RS00175;Parent=gene-LU604_RS00175;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=33211,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=LU604_RS00175;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 33569 34285 . - . ID=gene-LU604_RS00180;Name=LU604_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00180;old_locus_tag=LU604_00180 NZ_CP089942.1 Protein Homology CDS 33569 34285 . - 0 ID=cds-WP_016193035.1;Parent=gene-LU604_RS00180;Dbxref=Genbank:WP_016193035.1;Name=WP_016193035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539918.1;locus_tag=LU604_RS00180;product=DUF3053 domain-containing protein;protein_id=WP_016193035.1;transl_table=11 NZ_CP089942.1 RefSeq gene 34408 34629 . - . ID=gene-LU604_RS00185;Name=LU604_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00185;old_locus_tag=LU604_00185 NZ_CP089942.1 GeneMarkS-2+ CDS 34408 34629 . - 0 ID=cds-WP_152664221.1;Parent=gene-LU604_RS00185;Dbxref=Genbank:WP_152664221.1;Name=WP_152664221.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS00185;product=hypothetical protein;protein_id=WP_152664221.1;transl_table=11 NZ_CP089942.1 RefSeq gene 34879 36948 . - . ID=gene-LU604_RS00190;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=LU604_RS00190;old_locus_tag=LU604_00190 NZ_CP089942.1 Protein Homology CDS 34879 36948 . - 0 ID=cds-WP_233479612.1;Parent=gene-LU604_RS00190;Dbxref=Genbank:WP_233479612.1;Name=WP_233479612.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462555.1;locus_tag=LU604_RS00190;product=glycine--tRNA ligase subunit beta;protein_id=WP_233479612.1;transl_table=11 NZ_CP089942.1 RefSeq gene 36958 37869 . - . ID=gene-LU604_RS00195;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=LU604_RS00195;old_locus_tag=LU604_00195 NZ_CP089942.1 Protein Homology CDS 36958 37869 . - 0 ID=cds-WP_016193032.1;Parent=gene-LU604_RS00195;Dbxref=Genbank:WP_016193032.1;Name=WP_016193032.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004387598.1;locus_tag=LU604_RS00195;product=glycine--tRNA ligase subunit alpha;protein_id=WP_016193032.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 38067 39063 . + . ID=gene-LU604_RS00200;Name=LU604_RS00200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00200;old_locus_tag=LU604_00200;pseudo=true NZ_CP089942.1 Protein Homology CDS 38067 39063 . + 0 ID=cds-LU604_RS00200;Parent=gene-LU604_RS00200;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359613.1;locus_tag=LU604_RS00200;product=acyltransferase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 39051 39433 . - . ID=gene-LU604_RS00205;Name=LU604_RS00205;end_range=39433,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00205;old_locus_tag=LU604_00205;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 39051 39433 . - 0 ID=cds-LU604_RS00205;Parent=gene-LU604_RS00205;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003700,GO:0043565;end_range=39433,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742888.1;locus_tag=LU604_RS00205;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 39465 40001 . - . ID=gene-LU604_RS00210;Name=LU604_RS00210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00210;old_locus_tag=LU604_00210;partial=true;pseudo=true;start_range=.,39465 NZ_CP089942.1 Protein Homology CDS 39465 40001 . - 0 ID=cds-LU604_RS00210;Parent=gene-LU604_RS00210;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436757.1;locus_tag=LU604_RS00210;partial=true;product=isochorismatase family protein;pseudo=true;start_range=.,39465;transl_table=11 NZ_CP089942.1 RefSeq gene 40864 41109 . - . ID=gene-LU604_RS00215;Name=LU604_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00215;old_locus_tag=LU604_00215 NZ_CP089942.1 GeneMarkS-2+ CDS 40864 41109 . - 0 ID=cds-WP_016193029.1;Parent=gene-LU604_RS00215;Dbxref=Genbank:WP_016193029.1;Name=WP_016193029.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS00215;product=hypothetical protein;protein_id=WP_016193029.1;transl_table=11 NZ_CP089942.1 RefSeq gene 41397 42176 . + . ID=gene-LU604_RS00220;Name=LU604_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00220;old_locus_tag=LU604_00220 NZ_CP089942.1 Protein Homology CDS 41397 42176 . + 0 ID=cds-WP_161796989.1;Parent=gene-LU604_RS00220;Dbxref=Genbank:WP_161796989.1;Name=WP_161796989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147010.1;locus_tag=LU604_RS00220;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_161796989.1;transl_table=11 NZ_CP089942.1 RefSeq gene 42202 43479 . + . ID=gene-LU604_RS00225;Name=LU604_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00225;old_locus_tag=LU604_00225 NZ_CP089942.1 Protein Homology CDS 42202 43479 . + 0 ID=cds-WP_233479613.1;Parent=gene-LU604_RS00225;Dbxref=Genbank:WP_233479613.1;Name=WP_233479613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838470.1;locus_tag=LU604_RS00225;product=glycoside hydrolase family 10 protein;protein_id=WP_233479613.1;transl_table=11 NZ_CP089942.1 RefSeq gene 43779 44261 . + . ID=gene-LU604_RS00230;Name=LU604_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00230;old_locus_tag=LU604_00230 NZ_CP089942.1 Protein Homology CDS 43779 44261 . + 0 ID=cds-WP_016193026.1;Parent=gene-LU604_RS00230;Dbxref=Genbank:WP_016193026.1;Name=WP_016193026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204422.1;locus_tag=LU604_RS00230;product=RcnB family protein;protein_id=WP_016193026.1;transl_table=11 NZ_CP089942.1 RefSeq gene 44291 44881 . - . ID=gene-LU604_RS00235;Name=LU604_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00235;old_locus_tag=LU604_00235 NZ_CP089942.1 Protein Homology CDS 44291 44881 . - 0 ID=cds-WP_233479614.1;Parent=gene-LU604_RS00235;Dbxref=Genbank:WP_233479614.1;Name=WP_233479614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193025.1;locus_tag=LU604_RS00235;product=HD domain-containing protein;protein_id=WP_233479614.1;transl_table=11 NZ_CP089942.1 RefSeq gene 44943 45401 . + . ID=gene-LU604_RS00240;Name=LU604_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00240;old_locus_tag=LU604_00240 NZ_CP089942.1 Protein Homology CDS 44943 45401 . + 0 ID=cds-WP_233479615.1;Parent=gene-LU604_RS00240;Dbxref=Genbank:WP_233479615.1;Name=WP_233479615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161070.1;locus_tag=LU604_RS00240;product=MarR family transcriptional regulator;protein_id=WP_233479615.1;transl_table=11 NZ_CP089942.1 RefSeq gene 45507 45935 . + . ID=gene-LU604_RS00245;Name=LU604_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00245;old_locus_tag=LU604_00245 NZ_CP089942.1 Protein Homology CDS 45507 45935 . + 0 ID=cds-WP_233479616.1;Parent=gene-LU604_RS00245;Dbxref=Genbank:WP_233479616.1;Name=WP_233479616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161069.1;locus_tag=LU604_RS00245;product=organic hydroperoxide resistance protein;protein_id=WP_233479616.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 46213 47912 . + . ID=gene-LU604_RS00250;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=pseudogene;locus_tag=LU604_RS00250;old_locus_tag=LU604_00250;pseudo=true NZ_CP089942.1 Protein Homology CDS 46213 47912 . + 0 ID=cds-LU604_RS00250;Parent=gene-LU604_RS00250;Note=frameshifted;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848053.1;locus_tag=LU604_RS00250;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 48006 49967 . - . ID=gene-LU604_RS00255;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=LU604_RS00255;old_locus_tag=LU604_00255 NZ_CP089942.1 Protein Homology CDS 48006 49967 . - 0 ID=cds-WP_233479617.1;Parent=gene-LU604_RS00255;Dbxref=Genbank:WP_233479617.1;Name=WP_233479617.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071034.1;locus_tag=LU604_RS00255;product=catecholate siderophore receptor CirA;protein_id=WP_233479617.1;transl_table=11 NZ_CP089942.1 RefSeq gene 50015 51166 . - . ID=gene-LU604_RS00260;Name=LU604_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00260;old_locus_tag=LU604_00260 NZ_CP089942.1 Protein Homology CDS 50015 51166 . - 0 ID=cds-WP_233479618.1;Parent=gene-LU604_RS00260;Dbxref=Genbank:WP_233479618.1;Name=WP_233479618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193021.1;locus_tag=LU604_RS00260;product=ABC transporter substrate-binding protein;protein_id=WP_233479618.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 51748 52087 . + . ID=gene-LU604_RS00265;Name=LU604_RS00265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00265;old_locus_tag=LU604_00265;pseudo=true NZ_CP089942.1 Protein Homology CDS 51748 52087 . + 0 ID=cds-LU604_RS00265;Parent=gene-LU604_RS00265;Note=frameshifted;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201803.1;locus_tag=LU604_RS00265;product=SMR family transporter;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 52703 54313 . + . ID=gene-LU604_RS00270;Name=LU604_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00270;old_locus_tag=LU604_00270 NZ_CP089942.1 Protein Homology CDS 52703 54313 . + 0 ID=cds-WP_233479619.1;Parent=gene-LU604_RS00270;Dbxref=Genbank:WP_233479619.1;Name=WP_233479619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106234.1;locus_tag=LU604_RS00270;product=ABC transporter substrate-binding protein;protein_id=WP_233479619.1;transl_table=11 NZ_CP089942.1 RefSeq gene 54526 55545 . + . ID=gene-LU604_RS00275;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=LU604_RS00275;old_locus_tag=LU604_00275 NZ_CP089942.1 Protein Homology CDS 54526 55545 . + 0 ID=cds-WP_016193018.1;Parent=gene-LU604_RS00275;Dbxref=Genbank:WP_016193018.1;Name=WP_016193018.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=LU604_RS00275;product=dipeptide ABC transporter permease DppB;protein_id=WP_016193018.1;transl_table=11 NZ_CP089942.1 RefSeq gene 55556 56458 . + . ID=gene-LU604_RS00280;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=LU604_RS00280;old_locus_tag=LU604_00280 NZ_CP089942.1 Protein Homology CDS 55556 56458 . + 0 ID=cds-WP_016193017.1;Parent=gene-LU604_RS00280;Dbxref=Genbank:WP_016193017.1;Name=WP_016193017.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010257425.1;locus_tag=LU604_RS00280;product=dipeptide ABC transporter permease DppC;protein_id=WP_016193017.1;transl_table=11 NZ_CP089942.1 RefSeq gene 56468 57454 . + . ID=gene-LU604_RS00285;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=LU604_RS00285;old_locus_tag=LU604_00285 NZ_CP089942.1 Protein Homology CDS 56468 57454 . + 0 ID=cds-WP_016193016.1;Parent=gene-LU604_RS00285;Dbxref=Genbank:WP_016193016.1;Name=WP_016193016.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010257423.1;locus_tag=LU604_RS00285;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_016193016.1;transl_table=11 NZ_CP089942.1 RefSeq gene 57426 58445 . + . ID=gene-LU604_RS00290;Name=LU604_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00290;old_locus_tag=LU604_00290 NZ_CP089942.1 Protein Homology CDS 57426 58445 . + 0 ID=cds-WP_233480888.1;Parent=gene-LU604_RS00290;Dbxref=Genbank:WP_233480888.1;Name=WP_233480888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594988.1;locus_tag=LU604_RS00290;product=ABC transporter ATP-binding protein;protein_id=WP_233480888.1;transl_table=11 NZ_CP089942.1 RefSeq gene 58590 59618 . + . ID=gene-LU604_RS00295;Name=LU604_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00295;old_locus_tag=LU604_00295 NZ_CP089942.1 GeneMarkS-2+ CDS 58590 59618 . + 0 ID=cds-WP_046372112.1;Parent=gene-LU604_RS00295;Dbxref=Genbank:WP_046372112.1;Name=WP_046372112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS00295;product=hypothetical protein;protein_id=WP_046372112.1;transl_table=11 NZ_CP089942.1 RefSeq gene 59650 60347 . + . ID=gene-LU604_RS00300;Name=LU604_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00300;old_locus_tag=LU604_00300 NZ_CP089942.1 Protein Homology CDS 59650 59899 . + 0 ID=cds-WP_233479620.1;Parent=gene-LU604_RS00300;Dbxref=Genbank:WP_233479620.1;Name=WP_233479620.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS00300;product=IS1 family transposase;protein_id=WP_233479620.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 59899 60347 . + 2 ID=cds-WP_233479620.1;Parent=gene-LU604_RS00300;Dbxref=Genbank:WP_233479620.1;Name=WP_233479620.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS00300;product=IS1 family transposase;protein_id=WP_233479620.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 60566 61597 . + . ID=gene-LU604_RS00305;Name=LU604_RS00305;end_range=61597,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00305;old_locus_tag=LU604_00305;partial=true;pseudo=true;start_range=.,60566 NZ_CP089942.1 Protein Homology CDS 60566 61597 . + 0 ID=cds-LU604_RS00305;Parent=gene-LU604_RS00305;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006011,GO:0016020;end_range=61597,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=UDP-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594991.1;locus_tag=LU604_RS00305;partial=true;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;pseudo=true;start_range=.,60566;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 61754 62673 . + . ID=gene-LU604_RS00310;Name=LU604_RS00310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00310;old_locus_tag=LU604_00310;pseudo=true NZ_CP089942.1 Protein Homology CDS 61754 62673 . + 0 ID=cds-LU604_RS00310;Parent=gene-LU604_RS00310;Note=frameshifted%3B internal stop;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161055.1;locus_tag=LU604_RS00310;product=glycosyl hydrolase family 8;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 62795 64255 . + . ID=gene-LU604_RS00315;Name=LU604_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00315;old_locus_tag=LU604_00315 NZ_CP089942.1 Protein Homology CDS 62795 64255 . + 0 ID=cds-WP_016191542.1;Parent=gene-LU604_RS00315;Dbxref=Genbank:WP_016191542.1;Name=WP_016191542.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021508.2;locus_tag=LU604_RS00315;product=DUF2235 domain-containing protein;protein_id=WP_016191542.1;transl_table=11 NZ_CP089942.1 RefSeq gene 64664 65560 . - . ID=gene-LU604_RS00320;Name=LU604_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00320;old_locus_tag=LU604_00320 NZ_CP089942.1 Protein Homology CDS 64664 65560 . - 0 ID=cds-WP_233481451.1;Parent=gene-LU604_RS00320;Dbxref=Genbank:WP_233481451.1;Name=WP_233481451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191541.1;locus_tag=LU604_RS00320;product=Bpu10I family restriction endonuclease;protein_id=WP_233481451.1;transl_table=11 NZ_CP089942.1 RefSeq gene 65553 66731 . - . ID=gene-LU604_RS00325;Name=LU604_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00325;old_locus_tag=LU604_00325 NZ_CP089942.1 Protein Homology CDS 65553 66731 . - 0 ID=cds-WP_016191540.1;Parent=gene-LU604_RS00325;Dbxref=Genbank:WP_016191540.1;Name=WP_016191540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000048865.1;locus_tag=LU604_RS00325;product=DNA cytosine methyltransferase;protein_id=WP_016191540.1;transl_table=11 NZ_CP089942.1 RefSeq gene 67191 69224 . + . ID=gene-LU604_RS00330;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=LU604_RS00330;old_locus_tag=LU604_00330 NZ_CP089942.1 Protein Homology CDS 67191 69224 . + 0 ID=cds-WP_233479621.1;Parent=gene-LU604_RS00330;Dbxref=Genbank:WP_233479621.1;Name=WP_233479621.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171315.1;locus_tag=LU604_RS00330;product=biofilm formation regulator HmsP;protein_id=WP_233479621.1;transl_table=11 NZ_CP089942.1 RefSeq gene 69447 70727 . + . ID=gene-LU604_RS00335;Name=LU604_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00335;old_locus_tag=LU604_00335 NZ_CP089942.1 Protein Homology CDS 69447 70727 . + 0 ID=cds-WP_233479622.1;Parent=gene-LU604_RS00335;Dbxref=Genbank:WP_233479622.1;Name=WP_233479622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191538.1;locus_tag=LU604_RS00335;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_233479622.1;transl_table=11 NZ_CP089942.1 RefSeq gene 70965 72458 . + . ID=gene-LU604_RS00340;Name=LU604_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00340;old_locus_tag=LU604_00340 NZ_CP089942.1 Protein Homology CDS 70965 72458 . + 0 ID=cds-WP_233481452.1;Parent=gene-LU604_RS00340;Dbxref=Genbank:WP_233481452.1;Name=WP_233481452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191537.1;locus_tag=LU604_RS00340;product=pitrilysin family protein;protein_id=WP_233481452.1;transl_table=11 NZ_CP089942.1 RefSeq gene 72509 73384 . - . ID=gene-LU604_RS00345;Name=LU604_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00345;old_locus_tag=LU604_00345 NZ_CP089942.1 Protein Homology CDS 72509 73384 . - 0 ID=cds-WP_233479624.1;Parent=gene-LU604_RS00345;Dbxref=Genbank:WP_233479624.1;Name=WP_233479624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204388.1;locus_tag=LU604_RS00345;product=alpha/beta hydrolase;protein_id=WP_233479624.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 73559 74238 . + . ID=gene-LU604_RS00350;Name=LU604_RS00350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00350;old_locus_tag=LU604_00350;pseudo=true NZ_CP089942.1 Protein Homology CDS 73559 74238 . + 0 ID=cds-LU604_RS00350;Parent=gene-LU604_RS00350;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=LU604_RS00350;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 74502 76127 . + . ID=gene-LU604_RS00355;Name=LU604_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00355;old_locus_tag=LU604_00355 NZ_CP089942.1 Protein Homology CDS 74502 76127 . + 0 ID=cds-WP_233479625.1;Parent=gene-LU604_RS00355;Dbxref=Genbank:WP_233479625.1;Name=WP_233479625.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020844.2;locus_tag=LU604_RS00355;product=polysaccharide lyase family protein;protein_id=WP_233479625.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 76311 76502 . - . ID=gene-LU604_RS00360;Name=LU604_RS00360;end_range=76502,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00360;old_locus_tag=LU604_00360;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 76311 76502 . - 0 ID=cds-LU604_RS00360;Parent=gene-LU604_RS00360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=76502,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000766597.1;locus_tag=LU604_RS00360;partial=true;product=ISKra4 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 76536 77001 . - . ID=gene-LU604_RS00365;Name=LU604_RS00365;end_range=77001,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00365;old_locus_tag=LU604_00365;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 76536 77001 . - 0 ID=cds-LU604_RS00365;Parent=gene-LU604_RS00365;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=77001,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611683.1;locus_tag=LU604_RS00365;partial=true;product=Tn3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 77104 77370 . + . ID=gene-LU604_RS00370;Name=LU604_RS00370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00370;old_locus_tag=LU604_00370;partial=true;pseudo=true;start_range=.,77104 NZ_CP089942.1 Protein Homology CDS 77104 77370 . + 0 ID=cds-LU604_RS00370;Parent=gene-LU604_RS00370;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455304.1;locus_tag=LU604_RS00370;partial=true;product=hypothetical protein;pseudo=true;start_range=.,77104;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 77367 78292 . - . ID=gene-LU604_RS00375;Name=LU604_RS00375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00375;old_locus_tag=LU604_00375;pseudo=true NZ_CP089942.1 Protein Homology CDS 77367 78292 . - 0 ID=cds-LU604_RS00375;Parent=gene-LU604_RS00375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=LU604_RS00375;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 78249 79033 . - . ID=gene-LU604_RS00380;Name=LU604_RS00380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00380;old_locus_tag=LU604_00380;partial=true;pseudo=true;start_range=.,78249 NZ_CP089942.1 Protein Homology CDS 78249 79033 . - 0 ID=cds-LU604_RS00380;Parent=gene-LU604_RS00380;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611902.1;locus_tag=LU604_RS00380;partial=true;product=ISNCY family transposase;pseudo=true;start_range=.,78249;transl_table=11 NZ_CP089942.1 RefSeq gene 79542 80345 . - . ID=gene-LU604_RS00385;Name=LU604_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00385;old_locus_tag=LU604_00385 NZ_CP089942.1 Protein Homology CDS 79542 80345 . - 0 ID=cds-WP_233479626.1;Parent=gene-LU604_RS00385;Dbxref=Genbank:WP_233479626.1;Name=WP_233479626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191525.1;locus_tag=LU604_RS00385;product=DUF4225 domain-containing protein;protein_id=WP_233479626.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 80531 80847 . + . ID=gene-LU604_RS00390;Name=LU604_RS00390;end_range=80847,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00390;old_locus_tag=LU604_00390;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 80531 80847 . + 0 ID=cds-LU604_RS00390;Parent=gene-LU604_RS00390;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=80847,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=LU604_RS00390;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 81002 81934 . - . ID=gene-LU604_RS00395;Name=LU604_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00395;old_locus_tag=LU604_00395 NZ_CP089942.1 Protein Homology CDS 81002 81934 . - 0 ID=cds-WP_016191523.1;Parent=gene-LU604_RS00395;Dbxref=Genbank:WP_016191523.1;Name=WP_016191523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315827.1;locus_tag=LU604_RS00395;product=sugar kinase;protein_id=WP_016191523.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 82209 84224 . + . ID=gene-LU604_RS00400;Name=LU604_RS00400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00400;old_locus_tag=LU604_00400;pseudo=true NZ_CP089942.1 Protein Homology CDS 82209 84224 . + 0 ID=cds-LU604_RS00400;Parent=gene-LU604_RS00400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001231893.1;locus_tag=LU604_RS00400;product=AsmA family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 84704 85435 . - . ID=gene-LU604_RS00405;Name=LU604_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00405;old_locus_tag=LU604_00405 NZ_CP089942.1 GeneMarkS-2+ CDS 84704 85435 . - 0 ID=cds-WP_016191521.1;Parent=gene-LU604_RS00405;Dbxref=Genbank:WP_016191521.1;Name=WP_016191521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS00405;product=hypothetical protein;protein_id=WP_016191521.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 85568 86372 . - . ID=gene-LU604_RS00410;Name=LU604_RS00410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00410;old_locus_tag=LU604_00410;partial=true;pseudo=true;start_range=.,85568 NZ_CP089942.1 Protein Homology CDS 85568 86372 . - 0 ID=cds-LU604_RS00410;Parent=gene-LU604_RS00410;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917256.1;locus_tag=LU604_RS00410;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,85568;transl_table=11 NZ_CP089942.1 RefSeq gene 86494 86916 . - . ID=gene-LU604_RS00415;Name=LU604_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00415;old_locus_tag=LU604_00415 NZ_CP089942.1 GeneMarkS-2+ CDS 86494 86916 . - 0 ID=cds-WP_016191517.1;Parent=gene-LU604_RS00415;Dbxref=Genbank:WP_016191517.1;Name=WP_016191517.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS00415;product=hypothetical protein;protein_id=WP_016191517.1;transl_table=11 NZ_CP089942.1 RefSeq gene 86897 87631 . - . ID=gene-LU604_RS00420;Name=LU604_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00420;old_locus_tag=LU604_00420 NZ_CP089942.1 Protein Homology CDS 86897 87631 . - 0 ID=cds-WP_233479627.1;Parent=gene-LU604_RS00420;Dbxref=Genbank:WP_233479627.1;Name=WP_233479627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820295.1;locus_tag=LU604_RS00420;product=type III secretion protein;protein_id=WP_233479627.1;transl_table=11 NZ_CP089942.1 RefSeq gene 87618 88172 . - . ID=gene-LU604_RS00425;Name=LU604_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00425;old_locus_tag=LU604_00425 NZ_CP089942.1 Protein Homology CDS 87618 88172 . - 0 ID=cds-WP_016191515.1;Parent=gene-LU604_RS00425;Dbxref=Genbank:WP_016191515.1;Name=WP_016191515.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021031.2;locus_tag=LU604_RS00425;product=type III secretion system protein;protein_id=WP_016191515.1;transl_table=11 NZ_CP089942.1 RefSeq gene 88169 88939 . - . ID=gene-LU604_RS00430;Name=sctJ;gbkey=Gene;gene=sctJ;gene_biotype=protein_coding;locus_tag=LU604_RS00430;old_locus_tag=LU604_00430 NZ_CP089942.1 Protein Homology CDS 88169 88939 . - 0 ID=cds-WP_233479628.1;Parent=gene-LU604_RS00430;Dbxref=Genbank:WP_233479628.1;Name=WP_233479628.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctJ;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191514.1;locus_tag=LU604_RS00430;product=type III secretion inner membrane ring lipoprotein SctJ;protein_id=WP_233479628.1;transl_table=11 NZ_CP089942.1 RefSeq gene 88939 89262 . - . ID=gene-LU604_RS00435;Name=sctI;gbkey=Gene;gene=sctI;gene_biotype=protein_coding;locus_tag=LU604_RS00435;old_locus_tag=LU604_00435 NZ_CP089942.1 Protein Homology CDS 88939 89262 . - 0 ID=cds-WP_016191513.1;Parent=gene-LU604_RS00435;Dbxref=Genbank:WP_016191513.1;Name=WP_016191513.1;gbkey=CDS;gene=sctI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157270.1;locus_tag=LU604_RS00435;product=type III secretion system inner rod subunit SctI;protein_id=WP_016191513.1;transl_table=11 NZ_CP089942.1 RefSeq gene 89317 89589 . - . ID=gene-LU604_RS00440;Name=sctF;gbkey=Gene;gene=sctF;gene_biotype=protein_coding;locus_tag=LU604_RS00440;old_locus_tag=LU604_00440 NZ_CP089942.1 Protein Homology CDS 89317 89589 . - 0 ID=cds-WP_016191512.1;Parent=gene-LU604_RS00440;Dbxref=Genbank:WP_016191512.1;Name=WP_016191512.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctF;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155857.1;locus_tag=LU604_RS00440;product=type III secretion system needle filament subunit SctF;protein_id=WP_016191512.1;transl_table=11 NZ_CP089942.1 RefSeq gene 89593 90846 . - . ID=gene-LU604_RS00445;Name=LU604_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00445;old_locus_tag=LU604_00445 NZ_CP089942.1 Protein Homology CDS 89593 90846 . - 0 ID=cds-WP_233479629.1;Parent=gene-LU604_RS00445;Dbxref=Genbank:WP_233479629.1;Name=WP_233479629.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191511.1;locus_tag=LU604_RS00445;product=PrgH/EprH family type III secretion apparatus protein;protein_id=WP_233479629.1;transl_table=11 NZ_CP089942.1 RefSeq gene 91147 92025 . + . ID=gene-LU604_RS00450;Name=LU604_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00450;old_locus_tag=LU604_00450 NZ_CP089942.1 Protein Homology CDS 91147 92025 . + 0 ID=cds-WP_233479630.1;Parent=gene-LU604_RS00450;Dbxref=Genbank:WP_233479630.1;Name=WP_233479630.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=LU604_RS00450;product=helix-turn-helix domain-containing protein;protein_id=WP_233479630.1;transl_table=11 NZ_CP089942.1 RefSeq gene 92018 93790 . + . ID=gene-LU604_RS00455;Name=sctC;gbkey=Gene;gene=sctC;gene_biotype=protein_coding;locus_tag=LU604_RS00455;old_locus_tag=LU604_00455 NZ_CP089942.1 Protein Homology CDS 92018 93790 . + 0 ID=cds-WP_233479631.1;Parent=gene-LU604_RS00455;Dbxref=Genbank:WP_233479631.1;Name=WP_233479631.1;gbkey=CDS;gene=sctC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191509.1;locus_tag=LU604_RS00455;product=type III secretion system outer membrane ring subunit SctC;protein_id=WP_233479631.1;transl_table=11 NZ_CP089942.1 RefSeq gene 93797 94918 . + . ID=gene-LU604_RS00460;Name=sctW;gbkey=Gene;gene=sctW;gene_biotype=protein_coding;locus_tag=LU604_RS00460;old_locus_tag=LU604_00460 NZ_CP089942.1 Protein Homology CDS 93797 94918 . + 0 ID=cds-WP_016191508.1;Parent=gene-LU604_RS00460;Dbxref=Genbank:WP_016191508.1;Name=WP_016191508.1;Ontology_term=GO:0030254,GO:0050709,GO:0009986;gbkey=CDS;gene=sctW;go_component=cell surface|0009986||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA,negative regulation of protein secretion|0050709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155871.1;locus_tag=LU604_RS00460;product=type III secretion system gatekeeper subunit SctW;protein_id=WP_016191508.1;transl_table=11 NZ_CP089942.1 RefSeq gene 94949 97003 . + . ID=gene-LU604_RS00465;Name=LU604_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00465;old_locus_tag=LU604_00465 NZ_CP089942.1 Protein Homology CDS 94949 97003 . + 0 ID=cds-WP_233479632.1;Parent=gene-LU604_RS00465;Dbxref=Genbank:WP_233479632.1;Name=WP_233479632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191507.1;locus_tag=LU604_RS00465;product=EscV/YscV/HrcV family type III secretion system export apparatus protein;protein_id=WP_233479632.1;transl_table=11 NZ_CP089942.1 RefSeq gene 97013 97420 . + . ID=gene-LU604_RS00470;Name=LU604_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00470;old_locus_tag=LU604_00470 NZ_CP089942.1 Protein Homology CDS 97013 97420 . + 0 ID=cds-WP_016191506.1;Parent=gene-LU604_RS00470;Dbxref=Genbank:WP_016191506.1;Name=WP_016191506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155875.1;locus_tag=LU604_RS00470;product=type III secretion system protein;protein_id=WP_016191506.1;transl_table=11 NZ_CP089942.1 RefSeq gene 97439 98734 . + . ID=gene-LU604_RS00475;Name=sctN;gbkey=Gene;gene=sctN;gene_biotype=protein_coding;locus_tag=LU604_RS00475;old_locus_tag=LU604_00475 NZ_CP089942.1 Protein Homology CDS 97439 98734 . + 0 ID=cds-WP_233479633.1;Parent=gene-LU604_RS00475;Dbxref=Genbank:WP_233479633.1;Name=WP_233479633.1;gbkey=CDS;gene=sctN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169605.1;locus_tag=LU604_RS00475;product=type III secretion system ATPase SctN;protein_id=WP_233479633.1;transl_table=11 NZ_CP089942.1 RefSeq gene 98718 99179 . + . ID=gene-LU604_RS00480;Name=LU604_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00480;old_locus_tag=LU604_00480 NZ_CP089942.1 GeneMarkS-2+ CDS 98718 99179 . + 0 ID=cds-WP_233479634.1;Parent=gene-LU604_RS00480;Dbxref=Genbank:WP_233479634.1;Name=WP_233479634.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS00480;product=type III secretion system protein;protein_id=WP_233479634.1;transl_table=11 NZ_CP089942.1 RefSeq gene 99160 100068 . + . ID=gene-LU604_RS00485;Name=LU604_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00485;old_locus_tag=LU604_00485 NZ_CP089942.1 Protein Homology CDS 99160 100068 . + 0 ID=cds-WP_233479635.1;Parent=gene-LU604_RS00485;Dbxref=Genbank:WP_233479635.1;Name=WP_233479635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544129.1;locus_tag=LU604_RS00485;product=hypothetical protein;protein_id=WP_233479635.1;transl_table=11 NZ_CP089942.1 RefSeq gene 100065 100991 . + . ID=gene-LU604_RS00490;Name=LU604_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00490;old_locus_tag=LU604_00490 NZ_CP089942.1 Protein Homology CDS 100065 100991 . + 0 ID=cds-WP_016191502.1;Parent=gene-LU604_RS00490;Dbxref=Genbank:WP_016191502.1;Name=WP_016191502.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013236.2;locus_tag=LU604_RS00490;product=FliM/FliN family flagellar motor switch protein;protein_id=WP_016191502.1;transl_table=11 NZ_CP089942.1 RefSeq gene 100981 101652 . + . ID=gene-LU604_RS00495;Name=LU604_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00495;old_locus_tag=LU604_00495 NZ_CP089942.1 Protein Homology CDS 100981 101652 . + 0 ID=cds-WP_016191501.1;Parent=gene-LU604_RS00495;Dbxref=Genbank:WP_016191501.1;Name=WP_016191501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950425.1;locus_tag=LU604_RS00495;product=EscR/YscR/HrcR family type III secretion system export apparatus protein;protein_id=WP_016191501.1;transl_table=11 NZ_CP089942.1 RefSeq gene 101649 101903 . + . ID=gene-LU604_RS00500;Name=sctS;gbkey=Gene;gene=sctS;gene_biotype=protein_coding;locus_tag=LU604_RS00500;old_locus_tag=LU604_00500 NZ_CP089942.1 Protein Homology CDS 101649 101903 . + 0 ID=cds-WP_016191500.1;Parent=gene-LU604_RS00500;Dbxref=Genbank:WP_016191500.1;Name=WP_016191500.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155885.1;locus_tag=LU604_RS00500;product=type III secretion system export apparatus subunit SctS;protein_id=WP_016191500.1;transl_table=11 NZ_CP089942.1 RefSeq gene 101916 102680 . + . ID=gene-LU604_RS00505;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=LU604_RS00505;old_locus_tag=LU604_00505 NZ_CP089942.1 Protein Homology CDS 101916 102680 . + 0 ID=cds-WP_233479636.1;Parent=gene-LU604_RS00505;Dbxref=Genbank:WP_233479636.1;Name=WP_233479636.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctT;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191499.1;locus_tag=LU604_RS00505;product=type III secretion system export apparatus subunit SctT;protein_id=WP_233479636.1;transl_table=11 NZ_CP089942.1 RefSeq gene 102690 103781 . + . ID=gene-LU604_RS00510;Name=LU604_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00510;old_locus_tag=LU604_00510 NZ_CP089942.1 Protein Homology CDS 102690 103781 . + 0 ID=cds-WP_233479637.1;Parent=gene-LU604_RS00510;Dbxref=Genbank:WP_233479637.1;Name=WP_233479637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191498.1;locus_tag=LU604_RS00510;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;protein_id=WP_233479637.1;transl_table=11 NZ_CP089942.1 RefSeq gene 103916 104452 . + . ID=gene-LU604_RS00515;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=LU604_RS00515;old_locus_tag=LU604_00515 NZ_CP089942.1 Protein Homology CDS 103916 104452 . + 0 ID=cds-WP_016191497.1;Parent=gene-LU604_RS00515;Dbxref=Genbank:WP_016191497.1;Name=WP_016191497.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442390.1;locus_tag=LU604_RS00515;product=type III secretion system translocator chaperone SicA;protein_id=WP_016191497.1;transl_table=11 NZ_CP089942.1 RefSeq gene 104467 106338 . + . ID=gene-LU604_RS00520;Name=sctE;gbkey=Gene;gene=sctE;gene_biotype=protein_coding;locus_tag=LU604_RS00520;old_locus_tag=LU604_00520 NZ_CP089942.1 Protein Homology CDS 104467 106338 . + 0 ID=cds-WP_233479638.1;Parent=gene-LU604_RS00520;Dbxref=Genbank:WP_233479638.1;Name=WP_233479638.1;gbkey=CDS;gene=sctE;inference=COORDINATES: protein motif:HMM:NF016759.2;locus_tag=LU604_RS00520;product=type III secretion system translocon subunit SctE;protein_id=WP_233479638.1;transl_table=11 NZ_CP089942.1 RefSeq gene 106373 107578 . + . ID=gene-LU604_RS00525;Name=LU604_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00525;old_locus_tag=LU604_00525 NZ_CP089942.1 GeneMarkS-2+ CDS 106373 107578 . + 0 ID=cds-WP_233479639.1;Parent=gene-LU604_RS00525;Dbxref=Genbank:WP_233479639.1;Name=WP_233479639.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS00525;product=hypothetical protein;protein_id=WP_233479639.1;transl_table=11 NZ_CP089942.1 RefSeq gene 107649 108827 . + . ID=gene-LU604_RS00530;Name=LU604_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00530;old_locus_tag=LU604_00530 NZ_CP089942.1 Protein Homology CDS 107649 108827 . + 0 ID=cds-WP_233479640.1;Parent=gene-LU604_RS00530;Dbxref=Genbank:WP_233479640.1;Name=WP_233479640.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018244.2;locus_tag=LU604_RS00530;product=IpaD/SipD/SspD family type III secretion system needle tip protein;protein_id=WP_233479640.1;transl_table=11 NZ_CP089942.1 RefSeq gene 109491 113186 . + . ID=gene-LU604_RS00535;Name=LU604_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00535;old_locus_tag=LU604_00535 NZ_CP089942.1 GeneMarkS-2+ CDS 109491 113186 . + 0 ID=cds-WP_233479641.1;Parent=gene-LU604_RS00535;Dbxref=Genbank:WP_233479641.1;Name=WP_233479641.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS00535;product=hypothetical protein;protein_id=WP_233479641.1;transl_table=11 NZ_CP089942.1 RefSeq gene 113245 113514 . + . ID=gene-LU604_RS00540;Name=LU604_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00540;old_locus_tag=LU604_00540 NZ_CP089942.1 Protein Homology CDS 113245 113514 . + 0 ID=cds-WP_233479642.1;Parent=gene-LU604_RS00540;Dbxref=Genbank:WP_233479642.1;Name=WP_233479642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157295.1;locus_tag=LU604_RS00540;product=acyl carrier protein;protein_id=WP_233479642.1;transl_table=11 NZ_CP089942.1 RefSeq gene 113773 114813 . + . ID=gene-LU604_RS00545;Name=LU604_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00545;old_locus_tag=LU604_00545 NZ_CP089942.1 Protein Homology CDS 113773 114813 . + 0 ID=cds-WP_233478553.1;Parent=gene-LU604_RS00545;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS00545;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 115102 115653 . + . ID=gene-LU604_RS00550;Name=LU604_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00550;old_locus_tag=LU604_00550 NZ_CP089942.1 Protein Homology CDS 115102 115653 . + 0 ID=cds-WP_233479643.1;Parent=gene-LU604_RS00550;Dbxref=Genbank:WP_233479643.1;Name=WP_233479643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191491.1;locus_tag=LU604_RS00550;product=DUF1440 domain-containing protein;protein_id=WP_233479643.1;transl_table=11 NZ_CP089942.1 RefSeq gene 115803 117131 . - . ID=gene-LU604_RS00555;Name=LU604_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00555;old_locus_tag=LU604_00555 NZ_CP089942.1 Protein Homology CDS 115803 117131 . - 0 ID=cds-WP_016191490.1;Parent=gene-LU604_RS00555;Dbxref=Genbank:WP_016191490.1;Name=WP_016191490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443050.1;locus_tag=LU604_RS00555;product=MFS transporter;protein_id=WP_016191490.1;transl_table=11 NZ_CP089942.1 RefSeq gene 117338 117493 . - . ID=gene-LU604_RS00560;Name=LU604_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00560;old_locus_tag=LU604_00560 NZ_CP089942.1 GeneMarkS-2+ CDS 117338 117493 . - 0 ID=cds-WP_233479644.1;Parent=gene-LU604_RS00560;Dbxref=Genbank:WP_233479644.1;Name=WP_233479644.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS00560;product=hypothetical protein;protein_id=WP_233479644.1;transl_table=11 NZ_CP089942.1 RefSeq gene 117587 117832 . + . ID=gene-LU604_RS00565;Name=LU604_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00565;old_locus_tag=LU604_00565 NZ_CP089942.1 GeneMarkS-2+ CDS 117587 117832 . + 0 ID=cds-WP_016191489.1;Parent=gene-LU604_RS00565;Dbxref=Genbank:WP_016191489.1;Name=WP_016191489.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS00565;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_016191489.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 117883 118038 . - . ID=gene-LU604_RS00570;Name=LU604_RS00570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00570;old_locus_tag=LU604_00570;partial=true;pseudo=true;start_range=.,117883 NZ_CP089942.1 Protein Homology CDS 117883 118038 . - 0 ID=cds-LU604_RS00570;Parent=gene-LU604_RS00570;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000905001.1;locus_tag=LU604_RS00570;partial=true;product=recombinase family protein;pseudo=true;start_range=.,117883;transl_table=11 NZ_CP089942.1 RefSeq gene 118167 118409 . - . ID=gene-LU604_RS00575;Name=LU604_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00575;old_locus_tag=LU604_00575 NZ_CP089942.1 Protein Homology CDS 118167 118409 . - 0 ID=cds-WP_016191487.1;Parent=gene-LU604_RS00575;Dbxref=Genbank:WP_016191487.1;Name=WP_016191487.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=LU604_RS00575;product=SDR family oxidoreductase;protein_id=WP_016191487.1;transl_table=11 NZ_CP089942.1 RefSeq gene 119229 119789 . + . ID=gene-LU604_RS00580;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=LU604_RS00580;old_locus_tag=LU604_00580 NZ_CP089942.1 Protein Homology CDS 119229 119789 . + 0 ID=cds-WP_016191485.1;Parent=gene-LU604_RS00580;Dbxref=Genbank:WP_016191485.1;Name=WP_016191485.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161038.1;locus_tag=LU604_RS00580;product=manganese efflux pump MntP;protein_id=WP_016191485.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 120279 121010 . + . ID=gene-LU604_RS00585;Name=LU604_RS00585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00585;old_locus_tag=LU604_00585;pseudo=true NZ_CP089942.1 Protein Homology CDS 120279 121010 . + 0 ID=cds-LU604_RS00585;Parent=gene-LU604_RS00585;Note=internal stop;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083096.1;locus_tag=LU604_RS00585;product=glucose 1-dehydrogenase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 121123 122058 . + . ID=gene-LU604_RS00590;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=pseudogene;locus_tag=LU604_RS00590;old_locus_tag=LU604_00590;pseudo=true NZ_CP089942.1 Protein Homology CDS 121123 122058 . + 0 ID=cds-LU604_RS00590;Parent=gene-LU604_RS00590;Note=frameshifted;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006709009.1;locus_tag=LU604_RS00590;product=curved DNA-binding protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 122040 122339 . + . ID=gene-LU604_RS00595;Name=LU604_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00595;old_locus_tag=LU604_00595 NZ_CP089942.1 Protein Homology CDS 122040 122339 . + 0 ID=cds-WP_233479645.1;Parent=gene-LU604_RS00595;Dbxref=Genbank:WP_233479645.1;Name=WP_233479645.1;Note=with CpbA modulates the activity of the dnaK chaperone system%3B interacts with CbpA and inhibits both the DnaJ-like co-chaperone activity and the DNA binding activity of CbpA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004956352.1;locus_tag=LU604_RS00595;product=chaperone-modulator protein CbpM;protein_id=WP_233479645.1;transl_table=11 NZ_CP089942.1 RefSeq gene 122381 122716 . - . ID=gene-LU604_RS00600;Name=LU604_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00600;old_locus_tag=LU604_00600 NZ_CP089942.1 GeneMarkS-2+ CDS 122381 122716 . - 0 ID=cds-WP_233479646.1;Parent=gene-LU604_RS00600;Dbxref=Genbank:WP_233479646.1;Name=WP_233479646.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS00600;product=hypothetical protein;protein_id=WP_233479646.1;transl_table=11 NZ_CP089942.1 RefSeq gene 123019 123471 . - . ID=gene-LU604_RS00605;Name=LU604_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00605;old_locus_tag=LU604_00605 NZ_CP089942.1 Protein Homology CDS 123019 123471 . - 0 ID=cds-WP_233479647.1;Parent=gene-LU604_RS00605;Dbxref=Genbank:WP_233479647.1;Name=WP_233479647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191477.1;locus_tag=LU604_RS00605;product=SgcJ/EcaC family oxidoreductase;protein_id=WP_233479647.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 123639 124621 . + . ID=gene-LU604_RS00610;Name=LU604_RS00610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00610;old_locus_tag=LU604_00610;pseudo=true NZ_CP089942.1 Protein Homology CDS 123639 124621 . + 0 ID=cds-LU604_RS00610;Parent=gene-LU604_RS00610;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041206064.1;locus_tag=LU604_RS00610;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 125092 125733 . - . ID=gene-LU604_RS00615;Name=LU604_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00615;old_locus_tag=LU604_00615 NZ_CP089942.1 Protein Homology CDS 125092 125733 . - 0 ID=cds-WP_016191474.1;Parent=gene-LU604_RS00615;Dbxref=Genbank:WP_016191474.1;Name=WP_016191474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004960963.1;locus_tag=LU604_RS00615;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_016191474.1;transl_table=11 NZ_CP089942.1 RefSeq gene 125776 126537 . - . ID=gene-LU604_RS00620;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=LU604_RS00620;old_locus_tag=LU604_00620 NZ_CP089942.1 Protein Homology CDS 125776 126537 . - 0 ID=cds-WP_233479648.1;Parent=gene-LU604_RS00620;Dbxref=Genbank:WP_233479648.1;Name=WP_233479648.1;Ontology_term=GO:0000272,GO:0008678,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=2-deoxy-D-gluconate 3-dehydrogenase activity|0008678||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434532.1;locus_tag=LU604_RS00620;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_233479648.1;transl_table=11 NZ_CP089942.1 RefSeq gene 126551 127690 . - . ID=gene-LU604_RS00625;Name=LU604_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00625;old_locus_tag=LU604_00625 NZ_CP089942.1 Protein Homology CDS 126551 127690 . - 0 ID=cds-WP_233479649.1;Parent=gene-LU604_RS00625;Dbxref=Genbank:WP_233479649.1;Name=WP_233479649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814237.1;locus_tag=LU604_RS00625;product=glycoside hydrolase family 88 protein;protein_id=WP_233479649.1;transl_table=11 NZ_CP089942.1 RefSeq gene 127713 129317 . - . ID=gene-LU604_RS00630;Name=LU604_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00630;old_locus_tag=LU604_00630 NZ_CP089942.1 Protein Homology CDS 127713 129317 . - 0 ID=cds-WP_046372126.1;Parent=gene-LU604_RS00630;Dbxref=Genbank:WP_046372126.1;Name=WP_046372126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768577.1;locus_tag=LU604_RS00630;product=MFS transporter;protein_id=WP_046372126.1;transl_table=11 NZ_CP089942.1 RefSeq gene 129641 130654 . + . ID=gene-LU604_RS00635;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=LU604_RS00635;old_locus_tag=LU604_00635 NZ_CP089942.1 Protein Homology CDS 129641 130654 . + 0 ID=cds-WP_233479650.1;Parent=gene-LU604_RS00635;Dbxref=Genbank:WP_233479650.1;Name=WP_233479650.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191471.1;locus_tag=LU604_RS00635;product=alcohol dehydrogenase AdhP;protein_id=WP_233479650.1;transl_table=11 NZ_CP089942.1 RefSeq gene 131076 131255 . + . ID=gene-LU604_RS00640;Name=LU604_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00640;old_locus_tag=LU604_00640 NZ_CP089942.1 GeneMarkS-2+ CDS 131076 131255 . + 0 ID=cds-WP_040465604.1;Parent=gene-LU604_RS00640;Dbxref=Genbank:WP_040465604.1;Name=WP_040465604.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS00640;product=hypothetical protein;protein_id=WP_040465604.1;transl_table=11 NZ_CP089942.1 RefSeq gene 132267 132905 . + . ID=gene-LU604_RS00645;Name=LU604_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00645;old_locus_tag=LU604_00645 NZ_CP089942.1 Protein Homology CDS 132267 132905 . + 0 ID=cds-WP_016191469.1;Parent=gene-LU604_RS00645;Dbxref=Genbank:WP_016191469.1;Name=WP_016191469.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.2;locus_tag=LU604_RS00645;product=LuxR family transcriptional regulator;protein_id=WP_016191469.1;transl_table=11 NZ_CP089942.1 RefSeq gene 132970 133461 . - . ID=gene-LU604_RS00650;Name=LU604_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00650;old_locus_tag=LU604_00650 NZ_CP089942.1 Protein Homology CDS 132970 133461 . - 0 ID=cds-WP_016191468.1;Parent=gene-LU604_RS00650;Dbxref=Genbank:WP_016191468.1;Name=WP_016191468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178513.1;locus_tag=LU604_RS00650;product=DcrB-related protein;protein_id=WP_016191468.1;transl_table=11 NZ_CP089942.1 RefSeq gene 133471 134955 . - . ID=gene-LU604_RS00655;Name=LU604_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00655;old_locus_tag=LU604_00655 NZ_CP089942.1 Protein Homology CDS 133471 134955 . - 0 ID=cds-WP_233479651.1;Parent=gene-LU604_RS00655;Dbxref=Genbank:WP_233479651.1;Name=WP_233479651.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012894.2;locus_tag=LU604_RS00655;product=OmpA family protein;protein_id=WP_233479651.1;transl_table=11 NZ_CP089942.1 RefSeq gene 134955 135566 . - . ID=gene-LU604_RS00660;Name=LU604_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00660;old_locus_tag=LU604_00660 NZ_CP089942.1 GeneMarkS-2+ CDS 134955 135566 . - 0 ID=cds-WP_040465603.1;Parent=gene-LU604_RS00660;Dbxref=Genbank:WP_040465603.1;Name=WP_040465603.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS00660;product=DotU family type IV/VI secretion system protein;protein_id=WP_040465603.1;transl_table=11 NZ_CP089942.1 RefSeq gene 135560 136900 . - . ID=gene-LU604_RS00665;Name=LU604_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00665;old_locus_tag=LU604_00665 NZ_CP089942.1 Protein Homology CDS 135560 136900 . - 0 ID=cds-WP_233479652.1;Parent=gene-LU604_RS00665;Dbxref=Genbank:WP_233479652.1;Name=WP_233479652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191465.1;locus_tag=LU604_RS00665;product=UDP-N-acetylglucosamine-transferase;protein_id=WP_233479652.1;transl_table=11 NZ_CP089942.1 RefSeq gene 136923 137924 . - . ID=gene-LU604_RS00670;Name=LU604_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00670;old_locus_tag=LU604_00670 NZ_CP089942.1 Protein Homology CDS 136923 137924 . - 0 ID=cds-WP_040465602.1;Parent=gene-LU604_RS00670;Dbxref=Genbank:WP_040465602.1;Name=WP_040465602.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.2;locus_tag=LU604_RS00670;product=fimbrial protein;protein_id=WP_040465602.1;transl_table=11 NZ_CP089942.1 RefSeq gene 137930 138991 . - . ID=gene-LU604_RS00675;Name=LU604_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00675;old_locus_tag=LU604_00675 NZ_CP089942.1 Protein Homology CDS 137930 138991 . - 0 ID=cds-WP_016191463.1;Parent=gene-LU604_RS00675;Dbxref=Genbank:WP_016191463.1;Name=WP_016191463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713769.1;locus_tag=LU604_RS00675;product=type VI secretion system ImpA family N-terminal domain-containing protein;protein_id=WP_016191463.1;transl_table=11 NZ_CP089942.1 RefSeq gene 139069 140094 . - . ID=gene-LU604_RS00680;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LU604_RS00680;old_locus_tag=LU604_00680 NZ_CP089942.1 Protein Homology CDS 139069 140094 . - 0 ID=cds-WP_233479653.1;Parent=gene-LU604_RS00680;Dbxref=Genbank:WP_233479653.1;Name=WP_233479653.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191462.1;locus_tag=LU604_RS00680;product=type VI secretion system baseplate subunit TssG;protein_id=WP_233479653.1;transl_table=11 NZ_CP089942.1 RefSeq gene 140094 141971 . - . ID=gene-LU604_RS00685;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LU604_RS00685;old_locus_tag=LU604_00685 NZ_CP089942.1 Protein Homology CDS 140094 141971 . - 0 ID=cds-WP_016191461.1;Parent=gene-LU604_RS00685;Dbxref=Genbank:WP_016191461.1;Name=WP_016191461.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875821.1;locus_tag=LU604_RS00685;product=type VI secretion system baseplate subunit TssF;protein_id=WP_016191461.1;transl_table=11 NZ_CP089942.1 RefSeq gene 142573 145263 . + . ID=gene-LU604_RS00690;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=LU604_RS00690;old_locus_tag=LU604_00690 NZ_CP089942.1 Protein Homology CDS 142573 145263 . + 0 ID=cds-WP_016191460.1;Parent=gene-LU604_RS00690;Dbxref=Genbank:WP_016191460.1;Name=WP_016191460.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749066.1;locus_tag=LU604_RS00690;product=type VI secretion system ATPase TssH;protein_id=WP_016191460.1;transl_table=11 NZ_CP089942.1 RefSeq gene 145338 145889 . + . ID=gene-LU604_RS00695;Name=LU604_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00695;old_locus_tag=LU604_00695 NZ_CP089942.1 Protein Homology CDS 145338 145889 . + 0 ID=cds-WP_233479654.1;Parent=gene-LU604_RS00695;Dbxref=Genbank:WP_233479654.1;Name=WP_233479654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728506.1;locus_tag=LU604_RS00695;product=fimbrial protein;protein_id=WP_233479654.1;transl_table=11 NZ_CP089942.1 RefSeq gene 146049 146795 . + . ID=gene-LU604_RS00700;Name=LU604_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00700;old_locus_tag=LU604_00700 NZ_CP089942.1 Protein Homology CDS 146049 146795 . + 0 ID=cds-WP_040465639.1;Parent=gene-LU604_RS00700;Dbxref=Genbank:WP_040465639.1;Name=WP_040465639.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699305.1;locus_tag=LU604_RS00700;product=fimbria/pilus periplasmic chaperone;protein_id=WP_040465639.1;transl_table=11 NZ_CP089942.1 RefSeq gene 146902 149538 . + . ID=gene-LU604_RS00705;Name=LU604_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00705;old_locus_tag=LU604_00705 NZ_CP089942.1 Protein Homology CDS 146902 149538 . + 0 ID=cds-WP_233479655.1;Parent=gene-LU604_RS00705;Dbxref=Genbank:WP_233479655.1;Name=WP_233479655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191457.1;locus_tag=LU604_RS00705;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_233479655.1;transl_table=11 NZ_CP089942.1 RefSeq gene 149526 150107 . + . ID=gene-LU604_RS00710;Name=LU604_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00710;old_locus_tag=LU604_00710 NZ_CP089942.1 Protein Homology CDS 149526 150107 . + 0 ID=cds-WP_233479656.1;Parent=gene-LU604_RS00710;Dbxref=Genbank:WP_233479656.1;Name=WP_233479656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191456.1;locus_tag=LU604_RS00710;product=fimbrial protein;protein_id=WP_233479656.1;transl_table=11 NZ_CP089942.1 RefSeq gene 150232 150765 . + . ID=gene-LU604_RS00715;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=LU604_RS00715;old_locus_tag=LU604_00715 NZ_CP089942.1 Protein Homology CDS 150232 150765 . + 0 ID=cds-WP_040465600.1;Parent=gene-LU604_RS00715;Dbxref=Genbank:WP_040465600.1;Name=WP_040465600.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728496.1;locus_tag=LU604_RS00715;product=type VI secretion system contractile sheath small subunit;protein_id=WP_040465600.1;transl_table=11 NZ_CP089942.1 RefSeq gene 150783 152282 . + . ID=gene-LU604_RS00720;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LU604_RS00720;old_locus_tag=LU604_00720 NZ_CP089942.1 Protein Homology CDS 150783 152282 . + 0 ID=cds-WP_016191454.1;Parent=gene-LU604_RS00720;Dbxref=Genbank:WP_016191454.1;Name=WP_016191454.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005157570.1;locus_tag=LU604_RS00720;product=type VI secretion system contractile sheath large subunit;protein_id=WP_016191454.1;transl_table=11 NZ_CP089942.1 RefSeq gene 152434 152919 . + . ID=gene-LU604_RS00725;Name=LU604_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00725;old_locus_tag=LU604_00725 NZ_CP089942.1 Protein Homology CDS 152434 152919 . + 0 ID=cds-WP_016191453.1;Parent=gene-LU604_RS00725;Dbxref=Genbank:WP_016191453.1;Name=WP_016191453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211573.1;locus_tag=LU604_RS00725;product=Hcp family type VI secretion system effector;protein_id=WP_016191453.1;transl_table=11 NZ_CP089942.1 RefSeq gene 153050 153598 . + . ID=gene-LU604_RS00730;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LU604_RS00730;old_locus_tag=LU604_00730 NZ_CP089942.1 Protein Homology CDS 153050 153598 . + 0 ID=cds-WP_046372127.1;Parent=gene-LU604_RS00730;Dbxref=Genbank:WP_046372127.1;Name=WP_046372127.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR03352.1;locus_tag=LU604_RS00730;product=type VI secretion system lipoprotein TssJ;protein_id=WP_046372127.1;transl_table=11 NZ_CP089942.1 RefSeq gene 153602 154948 . + . ID=gene-LU604_RS00735;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LU604_RS00735;old_locus_tag=LU604_00735 NZ_CP089942.1 Protein Homology CDS 153602 154948 . + 0 ID=cds-WP_233479657.1;Parent=gene-LU604_RS00735;Dbxref=Genbank:WP_233479657.1;Name=WP_233479657.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007848145.1;locus_tag=LU604_RS00735;product=type VI secretion system baseplate subunit TssK;protein_id=WP_233479657.1;transl_table=11 NZ_CP089942.1 RefSeq gene 154948 156315 . + . ID=gene-LU604_RS00740;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=LU604_RS00740;old_locus_tag=LU604_00740 NZ_CP089942.1 Protein Homology CDS 154948 156315 . + 0 ID=cds-WP_233479658.1;Parent=gene-LU604_RS00740;Dbxref=Genbank:WP_233479658.1;Name=WP_233479658.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191450.1;locus_tag=LU604_RS00740;product=type VI secretion system protein TssL%2C long form;protein_id=WP_233479658.1;transl_table=11 NZ_CP089942.1 RefSeq gene 156327 160136 . + . ID=gene-LU604_RS00745;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=LU604_RS00745;old_locus_tag=LU604_00745 NZ_CP089942.1 Protein Homology CDS 156327 160136 . + 0 ID=cds-WP_233481453.1;Parent=gene-LU604_RS00745;Dbxref=Genbank:WP_233481453.1;Name=WP_233481453.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssM;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191449.1;locus_tag=LU604_RS00745;product=type VI secretion system membrane subunit TssM;protein_id=WP_233481453.1;transl_table=11 NZ_CP089942.1 RefSeq gene 160188 160832 . + . ID=gene-LU604_RS00750;Name=LU604_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00750;old_locus_tag=LU604_00750 NZ_CP089942.1 GeneMarkS-2+ CDS 160188 160832 . + 0 ID=cds-WP_233479660.1;Parent=gene-LU604_RS00750;Dbxref=Genbank:WP_233479660.1;Name=WP_233479660.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS00750;product=hypothetical protein;protein_id=WP_233479660.1;transl_table=11 NZ_CP089942.1 RefSeq gene 160959 163331 . + . ID=gene-LU604_RS00755;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=LU604_RS00755;old_locus_tag=LU604_00755 NZ_CP089942.1 Protein Homology CDS 160959 163331 . + 0 ID=cds-WP_233479661.1;Parent=gene-LU604_RS00755;Dbxref=Genbank:WP_233479661.1;Name=WP_233479661.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssI;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191447.1;locus_tag=LU604_RS00755;product=type VI secretion system tip protein TssI/VgrG;protein_id=WP_233479661.1;transl_table=11 NZ_CP089942.1 RefSeq gene 163455 163724 . + . ID=gene-LU604_RS00760;Name=LU604_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00760;old_locus_tag=LU604_00760 NZ_CP089942.1 Protein Homology CDS 163455 163724 . + 0 ID=cds-WP_016191446.1;Parent=gene-LU604_RS00760;Dbxref=Genbank:WP_016191446.1;Name=WP_016191446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209684.1;locus_tag=LU604_RS00760;product=PAAR domain-containing protein;protein_id=WP_016191446.1;transl_table=11 NZ_CP089942.1 RefSeq gene 163787 164566 . + . ID=gene-LU604_RS00765;Name=LU604_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00765;old_locus_tag=LU604_00765 NZ_CP089942.1 Protein Homology CDS 163787 164566 . + 0 ID=cds-WP_233479662.1;Parent=gene-LU604_RS00765;Dbxref=Genbank:WP_233479662.1;Name=WP_233479662.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033419.1;locus_tag=LU604_RS00765;product=TagK domain-containing protein;protein_id=WP_233479662.1;transl_table=11 NZ_CP089942.1 RefSeq gene 164585 165382 . + . ID=gene-LU604_RS00770;Name=LU604_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00770;old_locus_tag=LU604_00770 NZ_CP089942.1 Protein Homology CDS 164585 165382 . + 0 ID=cds-WP_233479663.1;Parent=gene-LU604_RS00770;Dbxref=Genbank:WP_233479663.1;Name=WP_233479663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191444.1;locus_tag=LU604_RS00770;product=type VI secretion system accessory protein TagJ;protein_id=WP_233479663.1;transl_table=11 NZ_CP089942.1 RefSeq gene 165394 165885 . + . ID=gene-LU604_RS00775;Name=LU604_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00775;old_locus_tag=LU604_00775 NZ_CP089942.1 Protein Homology CDS 165394 165885 . + 0 ID=cds-WP_016191443.1;Parent=gene-LU604_RS00775;Dbxref=Genbank:WP_016191443.1;Name=WP_016191443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005168546.1;locus_tag=LU604_RS00775;product=GPW/gp25 family protein;protein_id=WP_016191443.1;transl_table=11 NZ_CP089942.1 RefSeq gene 165989 167029 . - . ID=gene-LU604_RS00780;Name=LU604_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00780;old_locus_tag=LU604_00780 NZ_CP089942.1 Protein Homology CDS 165989 167029 . - 0 ID=cds-WP_233478989.1;Parent=gene-LU604_RS00780;Dbxref=Genbank:WP_233478989.1;Name=WP_233478989.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS00780;product=IS481 family transposase;protein_id=WP_233478989.1;transl_table=11 NZ_CP089942.1 RefSeq gene 167477 167566 . + . ID=gene-LU604_RS00785;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=LU604_RS00785;old_locus_tag=LU604_00785 NZ_CP089942.1 Protein Homology CDS 167477 167566 . + 0 ID=cds-WP_124232527.1;Parent=gene-LU604_RS00785;Dbxref=Genbank:WP_124232527.1;Name=WP_124232527.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=LU604_RS00785;product=K(+)-transporting ATPase subunit F;protein_id=WP_124232527.1;transl_table=11 NZ_CP089942.1 RefSeq gene 167566 169251 . + . ID=gene-LU604_RS00790;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=LU604_RS00790;old_locus_tag=LU604_00790 NZ_CP089942.1 Protein Homology CDS 167566 169251 . + 0 ID=cds-WP_233479664.1;Parent=gene-LU604_RS00790;Dbxref=Genbank:WP_233479664.1;Name=WP_233479664.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161013.1;locus_tag=LU604_RS00790;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_233479664.1;transl_table=11 NZ_CP089942.1 RefSeq gene 169270 171318 . + . ID=gene-LU604_RS00795;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=LU604_RS00795;old_locus_tag=LU604_00795 NZ_CP089942.1 Protein Homology CDS 169270 171318 . + 0 ID=cds-WP_016191441.1;Parent=gene-LU604_RS00795;Dbxref=Genbank:WP_016191441.1;Name=WP_016191441.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpB;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204341.1;locus_tag=LU604_RS00795;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_016191441.1;transl_table=11 NZ_CP089942.1 RefSeq gene 171329 171916 . + . ID=gene-LU604_RS00800;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=LU604_RS00800;old_locus_tag=LU604_00800 NZ_CP089942.1 Protein Homology CDS 171329 171916 . + 0 ID=cds-WP_016191440.1;Parent=gene-LU604_RS00800;Dbxref=Genbank:WP_016191440.1;Name=WP_016191440.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542751.1;locus_tag=LU604_RS00800;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_016191440.1;transl_table=11 NZ_CP089942.1 RefSeq gene 172264 174936 . + . ID=gene-LU604_RS00805;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=LU604_RS00805;old_locus_tag=LU604_00805 NZ_CP089942.1 Protein Homology CDS 172264 174936 . + 0 ID=cds-WP_233479665.1;Parent=gene-LU604_RS00805;Dbxref=Genbank:WP_233479665.1;Name=WP_233479665.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191439.1;locus_tag=LU604_RS00805;product=two-component system sensor histidine kinase KdpD;protein_id=WP_233479665.1;transl_table=11 NZ_CP089942.1 RefSeq gene 175368 176492 . - . ID=gene-LU604_RS00810;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=LU604_RS00810;old_locus_tag=LU604_00810 NZ_CP089942.1 Protein Homology CDS 175368 176492 . - 0 ID=cds-WP_233479666.1;Parent=gene-LU604_RS00810;Dbxref=Genbank:WP_233479666.1;Name=WP_233479666.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191437.1;locus_tag=LU604_RS00810;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_233479666.1;transl_table=11 NZ_CP089942.1 RefSeq gene 176520 177359 . - . ID=gene-LU604_RS00815;Name=LU604_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00815;old_locus_tag=LU604_00815 NZ_CP089942.1 Protein Homology CDS 176520 177359 . - 0 ID=cds-WP_016191436.1;Parent=gene-LU604_RS00815;Dbxref=Genbank:WP_016191436.1;Name=WP_016191436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145023.1;locus_tag=LU604_RS00815;product=carbohydrate ABC transporter permease;protein_id=WP_016191436.1;transl_table=11 NZ_CP089942.1 RefSeq gene 177349 178257 . - . ID=gene-LU604_RS00820;Name=LU604_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00820;old_locus_tag=LU604_00820 NZ_CP089942.1 Protein Homology CDS 177349 178257 . - 0 ID=cds-WP_233479667.1;Parent=gene-LU604_RS00820;Dbxref=Genbank:WP_233479667.1;Name=WP_233479667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191435.1;locus_tag=LU604_RS00820;product=sugar ABC transporter permease;protein_id=WP_233479667.1;transl_table=11 NZ_CP089942.1 RefSeq gene 178267 179517 . - . ID=gene-LU604_RS00825;Name=LU604_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00825;old_locus_tag=LU604_00825 NZ_CP089942.1 Protein Homology CDS 178267 179517 . - 0 ID=cds-WP_016191434.1;Parent=gene-LU604_RS00825;Dbxref=Genbank:WP_016191434.1;Name=WP_016191434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204333.1;locus_tag=LU604_RS00825;product=extracellular solute-binding protein;protein_id=WP_016191434.1;transl_table=11 NZ_CP089942.1 RefSeq gene 179728 180669 . - . ID=gene-LU604_RS00830;Name=LU604_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00830;old_locus_tag=LU604_00830 NZ_CP089942.1 Protein Homology CDS 179728 180669 . - 0 ID=cds-WP_016191433.1;Parent=gene-LU604_RS00830;Dbxref=Genbank:WP_016191433.1;Name=WP_016191433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031933.1;locus_tag=LU604_RS00830;product=ROK family protein;protein_id=WP_016191433.1;transl_table=11 NZ_CP089942.1 RefSeq gene 180666 181691 . - . ID=gene-LU604_RS00835;Name=LU604_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00835;old_locus_tag=LU604_00835 NZ_CP089942.1 Protein Homology CDS 180666 181691 . - 0 ID=cds-WP_016191432.1;Parent=gene-LU604_RS00835;Dbxref=Genbank:WP_016191432.1;Name=WP_016191432.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204331.1;locus_tag=LU604_RS00835;product=SIS domain-containing protein;protein_id=WP_016191432.1;transl_table=11 NZ_CP089942.1 RefSeq gene 181885 182661 . + . ID=gene-LU604_RS00840;Name=LU604_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00840;old_locus_tag=LU604_00840 NZ_CP089942.1 Protein Homology CDS 181885 182661 . + 0 ID=cds-WP_016191431.1;Parent=gene-LU604_RS00840;Dbxref=Genbank:WP_016191431.1;Name=WP_016191431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204330.1;locus_tag=LU604_RS00840;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_016191431.1;transl_table=11 NZ_CP089942.1 RefSeq gene 182738 183385 . - . ID=gene-LU604_RS00845;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=LU604_RS00845;old_locus_tag=LU604_00845 NZ_CP089942.1 Protein Homology CDS 182738 183385 . - 0 ID=cds-WP_016191430.1;Parent=gene-LU604_RS00845;Dbxref=Genbank:WP_016191430.1;Name=WP_016191430.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809664.1;locus_tag=LU604_RS00845;product=metal-binding protein ZinT;protein_id=WP_016191430.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 183567 185400 . + . ID=gene-LU604_RS00850;Name=LU604_RS00850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00850;old_locus_tag=LU604_00850;pseudo=true NZ_CP089942.1 Protein Homology CDS 183567 185400 . + 0 ID=cds-LU604_RS00850;Parent=gene-LU604_RS00850;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160995.1;locus_tag=LU604_RS00850;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 185397 186521 . - . ID=gene-LU604_RS00855;Name=LU604_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00855;old_locus_tag=LU604_00855 NZ_CP089942.1 Protein Homology CDS 185397 186521 . - 0 ID=cds-WP_233479668.1;Parent=gene-LU604_RS00855;Dbxref=Genbank:WP_233479668.1;Name=WP_233479668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191429.1;locus_tag=LU604_RS00855;product=GNAT family N-acetyltransferase;protein_id=WP_233479668.1;transl_table=11 NZ_CP089942.1 RefSeq gene 187041 187373 . + . ID=gene-LU604_RS00860;Name=LU604_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00860;old_locus_tag=LU604_00860 NZ_CP089942.1 Protein Homology CDS 187041 187373 . + 0 ID=cds-WP_016191428.1;Parent=gene-LU604_RS00860;Dbxref=Genbank:WP_016191428.1;Name=WP_016191428.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204324.1;locus_tag=LU604_RS00860;product=helix-turn-helix domain-containing protein;protein_id=WP_016191428.1;transl_table=11 NZ_CP089942.1 RefSeq gene 187493 187999 . + . ID=gene-LU604_RS00865;Name=LU604_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00865;old_locus_tag=LU604_00865 NZ_CP089942.1 Protein Homology CDS 187493 187999 . + 0 ID=cds-WP_016191427.1;Parent=gene-LU604_RS00865;Dbxref=Genbank:WP_016191427.1;Name=WP_016191427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004384868.1;locus_tag=LU604_RS00865;product=TIGR00645 family protein;protein_id=WP_016191427.1;transl_table=11 NZ_CP089942.1 RefSeq gene 188234 189151 . + . ID=gene-LU604_RS00870;Name=LU604_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00870;old_locus_tag=LU604_00870 NZ_CP089942.1 Protein Homology CDS 188234 189151 . + 0 ID=cds-WP_233479669.1;Parent=gene-LU604_RS00870;Dbxref=Genbank:WP_233479669.1;Name=WP_233479669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852102.1;locus_tag=LU604_RS00870;product=alpha/beta hydrolase;protein_id=WP_233479669.1;transl_table=11 NZ_CP089942.1 RefSeq gene 189167 190114 . - . ID=gene-LU604_RS00875;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=LU604_RS00875;old_locus_tag=LU604_00875 NZ_CP089942.1 Protein Homology CDS 189167 190114 . - 0 ID=cds-WP_016191425.1;Parent=gene-LU604_RS00875;Dbxref=Genbank:WP_016191425.1;Name=WP_016191425.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439917.1;locus_tag=LU604_RS00875;product=type I pantothenate kinase;protein_id=WP_016191425.1;transl_table=11 NZ_CP089942.1 RefSeq gene 191218 191293 . + . ID=gene-LU604_RS00880;Name=LU604_RS00880;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS00880;old_locus_tag=LU604_00880 NZ_CP089942.1 tRNAscan-SE tRNA 191218 191293 . + . ID=rna-LU604_RS00880;Parent=gene-LU604_RS00880;anticodon=(pos:191251..191253);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS00880;product=tRNA-Thr NZ_CP089942.1 tRNAscan-SE exon 191218 191293 . + . ID=exon-LU604_RS00880-1;Parent=rna-LU604_RS00880;anticodon=(pos:191251..191253);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS00880;product=tRNA-Thr NZ_CP089942.1 RefSeq gene 191306 191390 . + . ID=gene-LU604_RS00885;Name=LU604_RS00885;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS00885;old_locus_tag=LU604_00885 NZ_CP089942.1 tRNAscan-SE tRNA 191306 191390 . + . ID=rna-LU604_RS00885;Parent=gene-LU604_RS00885;anticodon=(pos:191340..191342);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS00885;product=tRNA-Tyr NZ_CP089942.1 tRNAscan-SE exon 191306 191390 . + . ID=exon-LU604_RS00885-1;Parent=rna-LU604_RS00885;anticodon=(pos:191340..191342);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS00885;product=tRNA-Tyr NZ_CP089942.1 RefSeq gene 191538 191612 . + . ID=gene-LU604_RS00890;Name=LU604_RS00890;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS00890;old_locus_tag=LU604_00890 NZ_CP089942.1 tRNAscan-SE tRNA 191538 191612 . + . ID=rna-LU604_RS00890;Parent=gene-LU604_RS00890;anticodon=(pos:191571..191573);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS00890;product=tRNA-Gly NZ_CP089942.1 tRNAscan-SE exon 191538 191612 . + . ID=exon-LU604_RS00890-1;Parent=rna-LU604_RS00890;anticodon=(pos:191571..191573);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS00890;product=tRNA-Gly NZ_CP089942.1 RefSeq gene 191619 191694 . + . ID=gene-LU604_RS00895;Name=LU604_RS00895;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS00895;old_locus_tag=LU604_00895 NZ_CP089942.1 tRNAscan-SE tRNA 191619 191694 . + . ID=rna-LU604_RS00895;Parent=gene-LU604_RS00895;anticodon=(pos:191652..191654);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS00895;product=tRNA-Thr NZ_CP089942.1 tRNAscan-SE exon 191619 191694 . + . ID=exon-LU604_RS00895-1;Parent=rna-LU604_RS00895;anticodon=(pos:191652..191654);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS00895;product=tRNA-Thr NZ_CP089942.1 RefSeq gene 191808 192992 . + . ID=gene-LU604_RS00900;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LU604_RS00900;old_locus_tag=LU604_00900 NZ_CP089942.1 Protein Homology CDS 191808 192992 . + 0 ID=cds-WP_016191423.1;Parent=gene-LU604_RS00900;Dbxref=Genbank:WP_016191423.1;Name=WP_016191423.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147227.1;locus_tag=LU604_RS00900;product=elongation factor Tu;protein_id=WP_016191423.1;transl_table=11 NZ_CP089942.1 RefSeq gene 193345 193728 . + . ID=gene-LU604_RS00905;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=LU604_RS00905;old_locus_tag=LU604_00905 NZ_CP089942.1 Protein Homology CDS 193345 193728 . + 0 ID=cds-WP_233479670.1;Parent=gene-LU604_RS00905;Dbxref=Genbank:WP_233479670.1;Name=WP_233479670.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=LU604_RS00905;product=preprotein translocase subunit SecE;protein_id=WP_233479670.1;transl_table=11 NZ_CP089942.1 RefSeq gene 193730 194275 . + . ID=gene-LU604_RS00910;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=LU604_RS00910;old_locus_tag=LU604_00910 NZ_CP089942.1 Protein Homology CDS 193730 194275 . + 0 ID=cds-WP_233479671.1;Parent=gene-LU604_RS00910;Dbxref=Genbank:WP_233479671.1;Name=WP_233479671.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953928.1;locus_tag=LU604_RS00910;product=transcription termination/antitermination protein NusG;protein_id=WP_233479671.1;transl_table=11 NZ_CP089942.1 RefSeq gene 194460 194888 . + . ID=gene-LU604_RS00915;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=LU604_RS00915;old_locus_tag=LU604_00915 NZ_CP089942.1 Protein Homology CDS 194460 194888 . + 0 ID=cds-WP_012439921.1;Parent=gene-LU604_RS00915;Dbxref=Genbank:WP_012439921.1;Name=WP_012439921.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=LU604_RS00915;product=50S ribosomal protein L11;protein_id=WP_012439921.1;transl_table=11 NZ_CP089942.1 RefSeq gene 194892 195596 . + . ID=gene-LU604_RS00920;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=LU604_RS00920;old_locus_tag=LU604_00920 NZ_CP089942.1 Protein Homology CDS 194892 195596 . + 0 ID=cds-WP_016191420.1;Parent=gene-LU604_RS00920;Dbxref=Genbank:WP_016191420.1;Name=WP_016191420.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312934.1;locus_tag=LU604_RS00920;product=50S ribosomal protein L1;protein_id=WP_016191420.1;transl_table=11 NZ_CP089942.1 RefSeq gene 196023 196520 . + . ID=gene-LU604_RS00925;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=LU604_RS00925;old_locus_tag=LU604_00925 NZ_CP089942.1 Protein Homology CDS 196023 196520 . + 0 ID=cds-WP_016191419.1;Parent=gene-LU604_RS00925;Dbxref=Genbank:WP_016191419.1;Name=WP_016191419.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=LU604_RS00925;product=50S ribosomal protein L10;protein_id=WP_016191419.1;transl_table=11 NZ_CP089942.1 RefSeq gene 196587 196952 . + . ID=gene-LU604_RS00930;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=LU604_RS00930;old_locus_tag=LU604_00930 NZ_CP089942.1 Protein Homology CDS 196587 196952 . + 0 ID=cds-WP_016191418.1;Parent=gene-LU604_RS00930;Dbxref=Genbank:WP_016191418.1;Name=WP_016191418.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=LU604_RS00930;product=50S ribosomal protein L7/L12;protein_id=WP_016191418.1;transl_table=11 NZ_CP089942.1 RefSeq gene 197293 201321 . + . ID=gene-LU604_RS00935;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=LU604_RS00935;old_locus_tag=LU604_00935 NZ_CP089942.1 Protein Homology CDS 197293 201321 . + 0 ID=cds-WP_233481454.1;Parent=gene-LU604_RS00935;Dbxref=Genbank:WP_233481454.1;Name=WP_233481454.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=LU604_RS00935;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_233481454.1;transl_table=11 NZ_CP089942.1 RefSeq gene 201397 205617 . + . ID=gene-LU604_RS00940;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=LU604_RS00940;old_locus_tag=LU604_00940 NZ_CP089942.1 Protein Homology CDS 201397 205617 . + 0 ID=cds-WP_233481455.1;Parent=gene-LU604_RS00940;Dbxref=Genbank:WP_233481455.1;Name=WP_233481455.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200298.1;locus_tag=LU604_RS00940;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_233481455.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 205730 206307 . + . ID=gene-LU604_RS00945;Name=LU604_RS00945;end_range=206307,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS00945;old_locus_tag=LU604_00945;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 205730 206307 . + 0 ID=cds-LU604_RS00945;Parent=gene-LU604_RS00945;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=206307,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001179707.1;locus_tag=LU604_RS00945;partial=true;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 206387 207517 . - . ID=gene-LU604_RS00950;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=LU604_RS00950;old_locus_tag=LU604_00950 NZ_CP089942.1 Protein Homology CDS 206387 207517 . - 0 ID=cds-WP_233479674.1;Parent=gene-LU604_RS00950;Dbxref=Genbank:WP_233479674.1;Name=WP_233479674.1;Ontology_term=GO:0009228,GO:0016829,GO:1904047;gbkey=CDS;gene=thiH;go_function=lyase activity|0016829||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845330.1;locus_tag=LU604_RS00950;product=2-iminoacetate synthase ThiH;protein_id=WP_233479674.1;transl_table=11 NZ_CP089942.1 RefSeq gene 207514 208290 . - . ID=gene-LU604_RS00955;Name=LU604_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00955;old_locus_tag=LU604_00955 NZ_CP089942.1 Protein Homology CDS 207514 208290 . - 0 ID=cds-WP_233479675.1;Parent=gene-LU604_RS00955;Dbxref=Genbank:WP_233479675.1;Name=WP_233479675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191413.1;locus_tag=LU604_RS00955;product=thiazole synthase;protein_id=WP_233479675.1;transl_table=11 NZ_CP089942.1 RefSeq gene 208293 208493 . - . ID=gene-LU604_RS00960;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=LU604_RS00960;old_locus_tag=LU604_00960 NZ_CP089942.1 Protein Homology CDS 208293 208493 . - 0 ID=cds-WP_016191412.1;Parent=gene-LU604_RS00960;Dbxref=Genbank:WP_016191412.1;Name=WP_016191412.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492754.1;locus_tag=LU604_RS00960;product=sulfur carrier protein ThiS;protein_id=WP_016191412.1;transl_table=11 NZ_CP089942.1 RefSeq gene 208477 209238 . - . ID=gene-LU604_RS00965;Name=LU604_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00965;old_locus_tag=LU604_00965 NZ_CP089942.1 Protein Homology CDS 208477 209238 . - 0 ID=cds-WP_233479676.1;Parent=gene-LU604_RS00965;Dbxref=Genbank:WP_233479676.1;Name=WP_233479676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191411.1;locus_tag=LU604_RS00965;product=HesA/MoeB/ThiF family protein;protein_id=WP_233479676.1;transl_table=11 NZ_CP089942.1 RefSeq gene 209228 209875 . - . ID=gene-LU604_RS00970;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=LU604_RS00970;old_locus_tag=LU604_00970 NZ_CP089942.1 Protein Homology CDS 209228 209875 . - 0 ID=cds-WP_233479677.1;Parent=gene-LU604_RS00970;Dbxref=Genbank:WP_233479677.1;Name=WP_233479677.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191410.1;locus_tag=LU604_RS00970;product=thiamine phosphate synthase;protein_id=WP_233479677.1;transl_table=11 NZ_CP089942.1 RefSeq gene 209872 211806 . - . ID=gene-LU604_RS00975;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=LU604_RS00975;old_locus_tag=LU604_00975 NZ_CP089942.1 Protein Homology CDS 209872 211806 . - 0 ID=cds-WP_016191409.1;Parent=gene-LU604_RS00975;Dbxref=Genbank:WP_016191409.1;Name=WP_016191409.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200305.1;locus_tag=LU604_RS00975;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_016191409.1;transl_table=11 NZ_CP089942.1 cmsearch riboswitch 211898 211998 . - . ID=id-NZ_CP089942.1:211898..211998;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP089942.1 RefSeq gene 212118 212627 . - . ID=gene-LU604_RS00980;Name=LU604_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS00980;old_locus_tag=LU604_00980 NZ_CP089942.1 Protein Homology CDS 212118 212627 . - 0 ID=cds-WP_016191408.1;Parent=gene-LU604_RS00980;Dbxref=Genbank:WP_016191408.1;Name=WP_016191408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542986.1;locus_tag=LU604_RS00980;product=Rsd/AlgQ family anti-sigma factor;protein_id=WP_016191408.1;transl_table=11 NZ_CP089942.1 RefSeq gene 212713 213486 . + . ID=gene-LU604_RS00985;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=LU604_RS00985;old_locus_tag=LU604_00985 NZ_CP089942.1 Protein Homology CDS 212713 213486 . + 0 ID=cds-WP_233480716.1;Parent=gene-LU604_RS00985;Dbxref=Genbank:WP_233480716.1;Name=WP_233480716.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830249.1;locus_tag=LU604_RS00985;product=NAD(+) diphosphatase;protein_id=WP_233480716.1;transl_table=11 NZ_CP089942.1 RefSeq gene 213525 214592 . + . ID=gene-LU604_RS00990;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=LU604_RS00990;old_locus_tag=LU604_00990 NZ_CP089942.1 Protein Homology CDS 213525 214592 . + 0 ID=cds-WP_016191406.1;Parent=gene-LU604_RS00990;Dbxref=Genbank:WP_016191406.1;Name=WP_016191406.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013035768.1;locus_tag=LU604_RS00990;product=uroporphyrinogen decarboxylase;protein_id=WP_016191406.1;transl_table=11 NZ_CP089942.1 RefSeq gene 214594 215262 . + . ID=gene-LU604_RS00995;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=LU604_RS00995;old_locus_tag=LU604_00995 NZ_CP089942.1 Protein Homology CDS 214594 215262 . + 0 ID=cds-WP_016191405.1;Parent=gene-LU604_RS00995;Dbxref=Genbank:WP_016191405.1;Name=WP_016191405.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200310.1;locus_tag=LU604_RS00995;product=deoxyribonuclease V;protein_id=WP_016191405.1;transl_table=11 NZ_CP089942.1 RefSeq gene 215330 215920 . + . ID=gene-LU604_RS01000;Name=LU604_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01000;old_locus_tag=LU604_01000 NZ_CP089942.1 Protein Homology CDS 215330 215920 . + 0 ID=cds-WP_233479678.1;Parent=gene-LU604_RS01000;Dbxref=Genbank:WP_233479678.1;Name=WP_233479678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418427.1;locus_tag=LU604_RS01000;product=YjaG family protein;protein_id=WP_233479678.1;transl_table=11 NZ_CP089942.1 RefSeq gene 216109 216381 . + . ID=gene-LU604_RS01005;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=LU604_RS01005;old_locus_tag=LU604_01005 NZ_CP089942.1 Protein Homology CDS 216109 216381 . + 0 ID=cds-WP_002438605.1;Parent=gene-LU604_RS01005;Dbxref=Genbank:WP_002438605.1;Name=WP_002438605.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=LU604_RS01005;product=DNA-binding protein HU-alpha;protein_id=WP_002438605.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 216549 216989 . + . ID=gene-LU604_RS01010;Name=tnpA;end_range=216989,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS01010;old_locus_tag=LU604_01010;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 216549 216989 . + 0 ID=cds-LU604_RS01010;Parent=gene-LU604_RS01010;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=216989,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000525033.1;locus_tag=LU604_RS01010;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 217180 217329 . + . ID=gene-LU604_RS01015;Name=LU604_RS01015;end_range=217329,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01015;old_locus_tag=LU604_01015;partial=true;pseudo=true;start_range=.,217180 NZ_CP089942.1 Protein Homology CDS 217180 217329 . + 0 ID=cds-LU604_RS01015;Parent=gene-LU604_RS01015;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=217329,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927715.1;locus_tag=LU604_RS01015;partial=true;product=sugar phosphate isomerase/epimerase;pseudo=true;start_range=.,217180;transl_table=11 NZ_CP089942.1 RefSeq gene 217493 218773 . - . ID=gene-LU604_RS01020;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=LU604_RS01020;old_locus_tag=LU604_01020 NZ_CP089942.1 Protein Homology CDS 217493 218773 . - 0 ID=cds-WP_233480717.1;Parent=gene-LU604_RS01020;Dbxref=Genbank:WP_233480717.1;Name=WP_233480717.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007886263.1;locus_tag=LU604_RS01020;product=phosphoribosylamine--glycine ligase;protein_id=WP_233480717.1;transl_table=11 NZ_CP089942.1 RefSeq gene 218788 220377 . - . ID=gene-LU604_RS01025;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=LU604_RS01025;old_locus_tag=LU604_01025 NZ_CP089942.1 Protein Homology CDS 218788 220377 . - 0 ID=cds-WP_233479679.1;Parent=gene-LU604_RS01025;Dbxref=Genbank:WP_233479679.1;Name=WP_233479679.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=LU604_RS01025;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_233479679.1;transl_table=11 NZ_CP089942.1 RefSeq gene 220968 222509 . + . ID=gene-LU604_RS01030;Name=LU604_RS01030;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU604_RS01030;old_locus_tag=LU604_01030 NZ_CP089942.1 cmsearch rRNA 220968 222509 . + . ID=rna-LU604_RS01030;Parent=gene-LU604_RS01030;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS01030;product=16S ribosomal RNA NZ_CP089942.1 cmsearch exon 220968 222509 . + . ID=exon-LU604_RS01030-1;Parent=rna-LU604_RS01030;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS01030;product=16S ribosomal RNA NZ_CP089942.1 RefSeq gene 222582 222658 . + . ID=gene-LU604_RS01035;Name=LU604_RS01035;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS01035;old_locus_tag=LU604_01035 NZ_CP089942.1 tRNAscan-SE tRNA 222582 222658 . + . ID=rna-LU604_RS01035;Parent=gene-LU604_RS01035;anticodon=(pos:222616..222618);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS01035;product=tRNA-Ile NZ_CP089942.1 tRNAscan-SE exon 222582 222658 . + . ID=exon-LU604_RS01035-1;Parent=rna-LU604_RS01035;anticodon=(pos:222616..222618);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS01035;product=tRNA-Ile NZ_CP089942.1 RefSeq gene 222801 222877 . + . ID=gene-LU604_RS01040;Name=LU604_RS01040;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS01040;old_locus_tag=LU604_01040 NZ_CP089942.1 tRNAscan-SE tRNA 222801 222877 . + . ID=rna-LU604_RS01040;Parent=gene-LU604_RS01040;anticodon=(pos:222835..222837);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS01040;product=tRNA-Ala NZ_CP089942.1 tRNAscan-SE exon 222801 222877 . + . ID=exon-LU604_RS01040-1;Parent=rna-LU604_RS01040;anticodon=(pos:222835..222837);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS01040;product=tRNA-Ala NZ_CP089942.1 RefSeq gene 223077 225979 . + . ID=gene-LU604_RS01045;Name=LU604_RS01045;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU604_RS01045;old_locus_tag=LU604_01045 NZ_CP089942.1 cmsearch rRNA 223077 225979 . + . ID=rna-LU604_RS01045;Parent=gene-LU604_RS01045;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS01045;product=23S ribosomal RNA NZ_CP089942.1 cmsearch exon 223077 225979 . + . ID=exon-LU604_RS01045-1;Parent=rna-LU604_RS01045;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS01045;product=23S ribosomal RNA NZ_CP089942.1 RefSeq gene 226183 226298 . + . ID=gene-LU604_RS01050;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LU604_RS01050;old_locus_tag=LU604_01050 NZ_CP089942.1 cmsearch rRNA 226183 226298 . + . ID=rna-LU604_RS01050;Parent=gene-LU604_RS01050;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS01050;product=5S ribosomal RNA NZ_CP089942.1 cmsearch exon 226183 226298 . + . ID=exon-LU604_RS01050-1;Parent=rna-LU604_RS01050;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS01050;product=5S ribosomal RNA NZ_CP089942.1 RefSeq gene 226410 226486 . + . ID=gene-LU604_RS01055;Name=LU604_RS01055;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS01055;old_locus_tag=LU604_01055 NZ_CP089942.1 tRNAscan-SE tRNA 226410 226486 . + . ID=rna-LU604_RS01055;Parent=gene-LU604_RS01055;anticodon=(pos:226444..226446);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS01055;product=tRNA-Asp NZ_CP089942.1 tRNAscan-SE exon 226410 226486 . + . ID=exon-LU604_RS01055-1;Parent=rna-LU604_RS01055;anticodon=(pos:226444..226446);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS01055;product=tRNA-Asp NZ_CP089942.1 RefSeq pseudogene 226857 227896 . - . ID=gene-LU604_RS01060;Name=LU604_RS01060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01060;old_locus_tag=LU604_01060;pseudo=true NZ_CP089942.1 Protein Homology CDS 226857 227896 . - 0 ID=cds-LU604_RS01060;Parent=gene-LU604_RS01060;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS01060;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 228082 229290 . - . ID=gene-LU604_RS01065;Name=LU604_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01065;old_locus_tag=LU604_01065 NZ_CP089942.1 Protein Homology CDS 228082 229290 . - 0 ID=cds-WP_233479680.1;Parent=gene-LU604_RS01065;Dbxref=Genbank:WP_233479680.1;Name=WP_233479680.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU604_RS01065;product=IS256 family transposase;protein_id=WP_233479680.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 229447 229883 . - . ID=gene-LU604_RS01070;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS01070;old_locus_tag=LU604_01070;pseudo=true NZ_CP089942.1 Protein Homology CDS 229447 229883 . - 0 ID=cds-LU604_RS01070;Parent=gene-LU604_RS01070;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU604_RS01070;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 230443 231249 . + . ID=gene-LU604_RS01075;Name=LU604_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01075;old_locus_tag=LU604_01075 NZ_CP089942.1 Protein Homology CDS 230443 231249 . + 0 ID=cds-WP_040465927.1;Parent=gene-LU604_RS01075;Dbxref=Genbank:WP_040465927.1;Name=WP_040465927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606543.1;locus_tag=LU604_RS01075;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_040465927.1;transl_table=11 NZ_CP089942.1 RefSeq gene 231609 232997 . - . ID=gene-LU604_RS01080;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=LU604_RS01080;old_locus_tag=LU604_01080 NZ_CP089942.1 Protein Homology CDS 231609 232997 . - 0 ID=cds-WP_233479681.1;Parent=gene-LU604_RS01080;Dbxref=Genbank:WP_233479681.1;Name=WP_233479681.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156037.1;locus_tag=LU604_RS01080;product=murein transglycosylase D;protein_id=WP_233479681.1;transl_table=11 NZ_CP089942.1 RefSeq gene 233067 233822 . - . ID=gene-LU604_RS01085;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=LU604_RS01085;old_locus_tag=LU604_01085 NZ_CP089942.1 Protein Homology CDS 233067 233822 . - 0 ID=cds-WP_233479682.1;Parent=gene-LU604_RS01085;Dbxref=Genbank:WP_233479682.1;Name=WP_233479682.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106317.1;locus_tag=LU604_RS01085;product=hydroxyacylglutathione hydrolase;protein_id=WP_233479682.1;transl_table=11 NZ_CP089942.1 RefSeq gene 233868 234605 . + . ID=gene-LU604_RS01090;Name=LU604_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01090;old_locus_tag=LU604_01090 NZ_CP089942.1 Protein Homology CDS 233868 234605 . + 0 ID=cds-WP_233479683.1;Parent=gene-LU604_RS01090;Dbxref=Genbank:WP_233479683.1;Name=WP_233479683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024720.1;locus_tag=LU604_RS01090;product=class I SAM-dependent methyltransferase;protein_id=WP_233479683.1;transl_table=11 NZ_CP089942.1 RefSeq gene 234590 235057 . - . ID=gene-LU604_RS01095;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=LU604_RS01095;old_locus_tag=LU604_01095 NZ_CP089942.1 Protein Homology CDS 234590 235057 . - 0 ID=cds-WP_016193122.1;Parent=gene-LU604_RS01095;Dbxref=Genbank:WP_016193122.1;Name=WP_016193122.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013507980.1;locus_tag=LU604_RS01095;product=ribonuclease HI;protein_id=WP_016193122.1;transl_table=11 NZ_CP089942.1 RefSeq gene 235109 235843 . + . ID=gene-LU604_RS01100;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=LU604_RS01100;old_locus_tag=LU604_01100 NZ_CP089942.1 Protein Homology CDS 235109 235843 . + 0 ID=cds-WP_233479684.1;Parent=gene-LU604_RS01100;Dbxref=Genbank:WP_233479684.1;Name=WP_233479684.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=LU604_RS01100;product=DNA polymerase III subunit epsilon;protein_id=WP_233479684.1;transl_table=11 NZ_CP089942.1 RefSeq gene 235966 236042 . + . ID=gene-LU604_RS01105;Name=LU604_RS01105;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS01105;old_locus_tag=LU604_01105 NZ_CP089942.1 tRNAscan-SE tRNA 235966 236042 . + . ID=rna-LU604_RS01105;Parent=gene-LU604_RS01105;anticodon=(pos:236000..236002);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS01105;product=tRNA-Asp NZ_CP089942.1 tRNAscan-SE exon 235966 236042 . + . ID=exon-LU604_RS01105-1;Parent=rna-LU604_RS01105;anticodon=(pos:236000..236002);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS01105;product=tRNA-Asp NZ_CP089942.1 RefSeq pseudogene 236518 236959 . + . ID=gene-LU604_RS01110;Name=mtnC;gbkey=Gene;gene=mtnC;gene_biotype=pseudogene;locus_tag=LU604_RS01110;old_locus_tag=LU604_01110;partial=true;pseudo=true;start_range=.,236518 NZ_CP089942.1 Protein Homology CDS 236518 236959 . + 0 ID=cds-LU604_RS01110;Parent=gene-LU604_RS01110;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019509,GO:0016791,GO:0016862;gbkey=CDS;gene=mtnC;go_function=phosphatase activity|0016791||IEA,intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016537695.1;locus_tag=LU604_RS01110;partial=true;product=acireductone synthase;pseudo=true;start_range=.,236518;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 236931 237402 . + . ID=gene-LU604_RS01115;Name=LU604_RS01115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01115;old_locus_tag=LU604_01115;pseudo=true NZ_CP089942.1 Protein Homology CDS 236931 237402 . + 0 ID=cds-LU604_RS01115;Parent=gene-LU604_RS01115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225781.1;locus_tag=LU604_RS01115;product=acireductone dioxygenase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 237659 238690 . - . ID=gene-LU604_RS01120;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=LU604_RS01120;old_locus_tag=LU604_01120 NZ_CP089942.1 Protein Homology CDS 237659 238690 . - 0 ID=cds-WP_233479685.1;Parent=gene-LU604_RS01120;Dbxref=Genbank:WP_233479685.1;Name=WP_233479685.1;Ontology_term=GO:0019509,GO:0046523;gbkey=CDS;gene=mtnA;go_function=S-methyl-5-thioribose-1-phosphate isomerase activity|0046523||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193127.1;locus_tag=LU604_RS01120;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=WP_233479685.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 238842 240027 . + . ID=gene-LU604_RS01125;Name=mtnK;gbkey=Gene;gene=mtnK;gene_biotype=pseudogene;locus_tag=LU604_RS01125;old_locus_tag=LU604_01125;pseudo=true NZ_CP089942.1 Protein Homology CDS 238842 240027 . + 0 ID=cds-LU604_RS01125;Parent=gene-LU604_RS01125;Note=frameshifted;Ontology_term=GO:0019509,GO:0046522;gbkey=CDS;gene=mtnK;go_function=S-methyl-5-thioribose kinase activity|0046522||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543536.1;locus_tag=LU604_RS01125;product=S-methyl-5-thioribose kinase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 240102 240738 . - . ID=gene-LU604_RS01130;Name=LU604_RS01130;end_range=240738,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01130;old_locus_tag=LU604_01130;partial=true;pseudo=true;start_range=.,240102 NZ_CP089942.1 Protein Homology CDS 240102 240738 . - 0 ID=cds-LU604_RS01130;Parent=gene-LU604_RS01130;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=240738,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS01130;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,240102;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 240869 241635 . - . ID=gene-LU604_RS01135;Name=LU604_RS01135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01135;old_locus_tag=LU604_01135;partial=true;pseudo=true;start_range=.,240869 NZ_CP089942.1 Protein Homology CDS 240869 241635 . - 0 ID=cds-LU604_RS01135;Parent=gene-LU604_RS01135;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225261.1;locus_tag=LU604_RS01135;partial=true;product=acyl-CoA dehydrogenase family protein;pseudo=true;start_range=.,240869;transl_table=11 NZ_CP089942.1 RefSeq gene 241849 242427 . + . ID=gene-LU604_RS01140;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=LU604_RS01140;old_locus_tag=LU604_01140 NZ_CP089942.1 Protein Homology CDS 241849 242427 . + 0 ID=cds-WP_233479686.1;Parent=gene-LU604_RS01140;Dbxref=Genbank:WP_233479686.1;Name=WP_233479686.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200911.1;locus_tag=LU604_RS01140;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_233479686.1;transl_table=11 NZ_CP089942.1 RefSeq gene 242471 243238 . + . ID=gene-LU604_RS01145;Name=LU604_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01145;old_locus_tag=LU604_01145 NZ_CP089942.1 Protein Homology CDS 242471 243238 . + 0 ID=cds-WP_233479687.1;Parent=gene-LU604_RS01145;Dbxref=Genbank:WP_233479687.1;Name=WP_233479687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156100.1;locus_tag=LU604_RS01145;product=class II glutamine amidotransferase;protein_id=WP_233479687.1;transl_table=11 NZ_CP089942.1 RefSeq gene 243209 243952 . - . ID=gene-LU604_RS01150;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=LU604_RS01150;old_locus_tag=LU604_01150 NZ_CP089942.1 Protein Homology CDS 243209 243952 . - 0 ID=cds-WP_233479688.1;Parent=gene-LU604_RS01150;Dbxref=Genbank:WP_233479688.1;Name=WP_233479688.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606503.1;locus_tag=LU604_RS01150;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_233479688.1;transl_table=11 NZ_CP089942.1 RefSeq gene 244188 245243 . + . ID=gene-LU604_RS01155;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=LU604_RS01155;old_locus_tag=LU604_01155 NZ_CP089942.1 Protein Homology CDS 244188 245243 . + 0 ID=cds-WP_233479689.1;Parent=gene-LU604_RS01155;Dbxref=Genbank:WP_233479689.1;Name=WP_233479689.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414766.1;locus_tag=LU604_RS01155;product=DNA polymerase IV;protein_id=WP_233479689.1;transl_table=11 NZ_CP089942.1 RefSeq gene 245411 246868 . - . ID=gene-LU604_RS01160;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=LU604_RS01160;old_locus_tag=LU604_01160 NZ_CP089942.1 Protein Homology CDS 245411 246868 . - 0 ID=cds-WP_233479690.1;Parent=gene-LU604_RS01160;Dbxref=Genbank:WP_233479690.1;Name=WP_233479690.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=LU604_RS01160;product=beta-Ala-His dipeptidase;protein_id=WP_233479690.1;transl_table=11 NZ_CP089942.1 RefSeq gene 247121 247579 . + . ID=gene-LU604_RS01165;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=LU604_RS01165;old_locus_tag=LU604_01165 NZ_CP089942.1 Protein Homology CDS 247121 247579 . + 0 ID=cds-WP_233479691.1;Parent=gene-LU604_RS01165;Dbxref=Genbank:WP_233479691.1;Name=WP_233479691.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200916.1;locus_tag=LU604_RS01165;product=xanthine phosphoribosyltransferase;protein_id=WP_233479691.1;transl_table=11 NZ_CP089942.1 RefSeq gene 247711 248943 . + . ID=gene-LU604_RS01170;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=LU604_RS01170;old_locus_tag=LU604_01170 NZ_CP089942.1 Protein Homology CDS 247711 248943 . + 0 ID=cds-WP_233480718.1;Parent=gene-LU604_RS01170;Dbxref=Genbank:WP_233480718.1;Name=WP_233480718.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008924842.1;locus_tag=LU604_RS01170;product=esterase FrsA;protein_id=WP_233480718.1;transl_table=11 NZ_CP089942.1 RefSeq gene 249048 249449 . + . ID=gene-LU604_RS01175;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=LU604_RS01175;old_locus_tag=LU604_01175 NZ_CP089942.1 Protein Homology CDS 249048 249449 . + 0 ID=cds-WP_016193139.1;Parent=gene-LU604_RS01175;Dbxref=Genbank:WP_016193139.1;Name=WP_016193139.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000174676.1;locus_tag=LU604_RS01175;product=sigma factor-binding protein Crl;protein_id=WP_016193139.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 249529 249727 . - . ID=gene-LU604_RS01180;Name=LU604_RS01180;end_range=249727,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01180;old_locus_tag=LU604_01180;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 249529 249727 . - 0 ID=cds-LU604_RS01180;Parent=gene-LU604_RS01180;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0034220,GO:0015288,GO:0009279,GO:0016020;end_range=249727,.;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210809.1;locus_tag=LU604_RS01180;partial=true;product=porin;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 249776 249865 . - . ID=gene-LU604_RS01185;Name=LU604_RS01185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01185;old_locus_tag=LU604_01185;partial=true;pseudo=true;start_range=.,249776 NZ_CP089942.1 Protein Homology CDS 249776 249865 . - 0 ID=cds-LU604_RS01185;Parent=gene-LU604_RS01185;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012489.2;locus_tag=LU604_RS01185;partial=true;product=hypothetical protein;pseudo=true;start_range=.,249776;transl_table=11 NZ_CP089942.1 RefSeq gene 250187 251290 . + . ID=gene-LU604_RS01190;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=LU604_RS01190;old_locus_tag=LU604_01190 NZ_CP089942.1 Protein Homology CDS 250187 251290 . + 0 ID=cds-WP_016193143.1;Parent=gene-LU604_RS01190;Dbxref=Genbank:WP_016193143.1;Name=WP_016193143.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118057.1;locus_tag=LU604_RS01190;product=glutamate 5-kinase;protein_id=WP_016193143.1;transl_table=11 NZ_CP089942.1 RefSeq gene 251306 252559 . + . ID=gene-LU604_RS01195;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=LU604_RS01195;old_locus_tag=LU604_01195 NZ_CP089942.1 Protein Homology CDS 251306 252559 . + 0 ID=cds-WP_016193144.1;Parent=gene-LU604_RS01195;Dbxref=Genbank:WP_016193144.1;Name=WP_016193144.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356909.1;locus_tag=LU604_RS01195;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_016193144.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 252643 252762 . + . ID=gene-LU604_RS01200;Name=LU604_RS01200;end_range=252762,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01200;old_locus_tag=LU604_01200;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 252643 252762 . + 0 ID=cds-LU604_RS01200;Parent=gene-LU604_RS01200;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=252762,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942203.1;locus_tag=LU604_RS01200;partial=true;product=LysE family translocator;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 252805 253170 . + . ID=gene-LU604_RS01205;Name=LU604_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01205;old_locus_tag=LU604_01205 NZ_CP089942.1 Protein Homology CDS 252805 253170 . + 0 ID=cds-WP_016193146.1;Parent=gene-LU604_RS01205;Dbxref=Genbank:WP_016193146.1;Name=WP_016193146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003841963.1;locus_tag=LU604_RS01205;product=HNH endonuclease signature motif containing protein;protein_id=WP_016193146.1;transl_table=11 NZ_CP089942.1 RefSeq gene 253699 255345 . - . ID=gene-LU604_RS01210;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=LU604_RS01210;old_locus_tag=LU604_01210 NZ_CP089942.1 Protein Homology CDS 253699 255345 . - 0 ID=cds-WP_016193147.1;Parent=gene-LU604_RS01210;Dbxref=Genbank:WP_016193147.1;Name=WP_016193147.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226720.1;locus_tag=LU604_RS01210;product=class I fumarate hydratase FumA;protein_id=WP_016193147.1;transl_table=11 NZ_CP089942.1 RefSeq gene 255400 256836 . - . ID=gene-LU604_RS01215;Name=LU604_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01215;old_locus_tag=LU604_01215 NZ_CP089942.1 Protein Homology CDS 255400 256836 . - 0 ID=cds-WP_232426939.1;Parent=gene-LU604_RS01215;Dbxref=Genbank:WP_232426939.1;Name=WP_232426939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851326.1;locus_tag=LU604_RS01215;product=anion permease;protein_id=WP_232426939.1;transl_table=11 NZ_CP089942.1 RefSeq gene 257690 258387 . + . ID=gene-LU604_RS01220;Name=LU604_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01220;old_locus_tag=LU604_01220 NZ_CP089942.1 Protein Homology CDS 257690 257939 . + 0 ID=cds-WP_233479692.1;Parent=gene-LU604_RS01220;Dbxref=Genbank:WP_233479692.1;Name=WP_233479692.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS01220;product=IS1 family transposase;protein_id=WP_233479692.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 257939 258387 . + 2 ID=cds-WP_233479692.1;Parent=gene-LU604_RS01220;Dbxref=Genbank:WP_233479692.1;Name=WP_233479692.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS01220;product=IS1 family transposase;protein_id=WP_233479692.1;transl_table=11 NZ_CP089942.1 RefSeq gene 258452 258967 . + . ID=gene-LU604_RS01225;Name=LU604_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01225;old_locus_tag=LU604_01225 NZ_CP089942.1 GeneMarkS-2+ CDS 258452 258967 . + 0 ID=cds-WP_233480892.1;Parent=gene-LU604_RS01225;Dbxref=Genbank:WP_233480892.1;Name=WP_233480892.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01225;product=hypothetical protein;protein_id=WP_233480892.1;transl_table=11 NZ_CP089942.1 RefSeq gene 259115 259795 . + . ID=gene-LU604_RS01230;Name=LU604_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01230;old_locus_tag=LU604_01230 NZ_CP089942.1 GeneMarkS-2+ CDS 259115 259795 . + 0 ID=cds-WP_233480893.1;Parent=gene-LU604_RS01230;Dbxref=Genbank:WP_233480893.1;Name=WP_233480893.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01230;product=hypothetical protein;protein_id=WP_233480893.1;transl_table=11 NZ_CP089942.1 RefSeq gene 259852 260040 . + . ID=gene-LU604_RS01235;Name=LU604_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01235;old_locus_tag=LU604_01235 NZ_CP089942.1 GeneMarkS-2+ CDS 259852 260040 . + 0 ID=cds-WP_233480894.1;Parent=gene-LU604_RS01235;Dbxref=Genbank:WP_233480894.1;Name=WP_233480894.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01235;product=hypothetical protein;protein_id=WP_233480894.1;transl_table=11 NZ_CP089942.1 RefSeq gene 260059 260622 . + . ID=gene-LU604_RS01240;Name=LU604_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01240;old_locus_tag=LU604_01240 NZ_CP089942.1 GeneMarkS-2+ CDS 260059 260622 . + 0 ID=cds-WP_233480895.1;Parent=gene-LU604_RS01240;Dbxref=Genbank:WP_233480895.1;Name=WP_233480895.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01240;product=FAD-binding protein;protein_id=WP_233480895.1;transl_table=11 NZ_CP089942.1 RefSeq gene 260688 261056 . + . ID=gene-LU604_RS01245;Name=LU604_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01245;old_locus_tag=LU604_01245 NZ_CP089942.1 GeneMarkS-2+ CDS 260688 261056 . + 0 ID=cds-WP_233480896.1;Parent=gene-LU604_RS01245;Dbxref=Genbank:WP_233480896.1;Name=WP_233480896.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01245;product=FAD-binding protein;protein_id=WP_233480896.1;transl_table=11 NZ_CP089942.1 RefSeq gene 261107 262075 . + . ID=gene-LU604_RS01250;Name=LU604_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01250;old_locus_tag=LU604_01250 NZ_CP089942.1 Protein Homology CDS 261107 262075 . + 0 ID=cds-WP_233479693.1;Parent=gene-LU604_RS01250;Dbxref=Genbank:WP_233479693.1;Name=WP_233479693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193155.1;locus_tag=LU604_RS01250;product=FAD:protein FMN transferase;protein_id=WP_233479693.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 262053 262776 . - . ID=gene-LU604_RS01255;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=pseudogene;locus_tag=LU604_RS01255;old_locus_tag=LU604_01255;pseudo=true NZ_CP089942.1 Protein Homology CDS 262053 262776 . - 0 ID=cds-LU604_RS01255;Parent=gene-LU604_RS01255;Note=frameshifted;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132485.1;locus_tag=LU604_RS01255;product=two-component system response regulator DcuR;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 262773 263081 . - . ID=gene-LU604_RS01260;Name=LU604_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01260;old_locus_tag=LU604_01260 NZ_CP089942.1 Protein Homology CDS 262773 263081 . - 0 ID=cds-WP_233480719.1;Parent=gene-LU604_RS01260;Dbxref=Genbank:WP_233480719.1;Name=WP_233480719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457055.1;locus_tag=LU604_RS01260;product=ATP-binding protein;protein_id=WP_233480719.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 263047 263907 . - . ID=gene-LU604_RS01265;Name=LU604_RS01265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01265;old_locus_tag=LU604_01265;pseudo=true NZ_CP089942.1 Protein Homology CDS 263047 263907 . - 0 ID=cds-LU604_RS01265;Parent=gene-LU604_RS01265;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358191.1;locus_tag=LU604_RS01265;product=MurR/RpiR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 264082 264219 . - . ID=gene-LU604_RS01270;Name=LU604_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01270;old_locus_tag=LU604_01270 NZ_CP089942.1 GeneMarkS-2+ CDS 264082 264219 . - 0 ID=cds-WP_233479694.1;Parent=gene-LU604_RS01270;Dbxref=Genbank:WP_233479694.1;Name=WP_233479694.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01270;product=hypothetical protein;protein_id=WP_233479694.1;transl_table=11 NZ_CP089942.1 RefSeq gene 264295 265050 . - . ID=gene-LU604_RS01275;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=LU604_RS01275;old_locus_tag=LU604_01275 NZ_CP089942.1 Protein Homology CDS 264295 265050 . - 0 ID=cds-WP_233479695.1;Parent=gene-LU604_RS01275;Dbxref=Genbank:WP_233479695.1;Name=WP_233479695.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095301.1;locus_tag=LU604_RS01275;product=HTH-type transcriptional regulator UlaR;protein_id=WP_233479695.1;transl_table=11 NZ_CP089942.1 RefSeq gene 265156 266220 . - . ID=gene-LU604_RS01280;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=LU604_RS01280;old_locus_tag=LU604_01280 NZ_CP089942.1 Protein Homology CDS 265156 266220 . - 0 ID=cds-WP_016193160.1;Parent=gene-LU604_RS01280;Dbxref=Genbank:WP_016193160.1;Name=WP_016193160.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=LU604_RS01280;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_016193160.1;transl_table=11 NZ_CP089942.1 RefSeq gene 266606 268015 . + . ID=gene-LU604_RS01285;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=LU604_RS01285;old_locus_tag=LU604_01285 NZ_CP089942.1 Protein Homology CDS 266606 268015 . + 0 ID=cds-WP_233479696.1;Parent=gene-LU604_RS01285;Dbxref=Genbank:WP_233479696.1;Name=WP_233479696.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091029.1;locus_tag=LU604_RS01285;product=PTS ascorbate transporter subunit IIC;protein_id=WP_233479696.1;transl_table=11 NZ_CP089942.1 RefSeq gene 268048 268356 . + . ID=gene-LU604_RS01290;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=LU604_RS01290;old_locus_tag=LU604_01290 NZ_CP089942.1 Protein Homology CDS 268048 268356 . + 0 ID=cds-WP_016193164.1;Parent=gene-LU604_RS01290;Dbxref=Genbank:WP_016193164.1;Name=WP_016193164.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=LU604_RS01290;product=PTS ascorbate transporter subunit IIB;protein_id=WP_016193164.1;transl_table=11 NZ_CP089942.1 RefSeq gene 268547 269026 . + . ID=gene-LU604_RS01295;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=LU604_RS01295;old_locus_tag=LU604_01295 NZ_CP089942.1 Protein Homology CDS 268547 269026 . + 0 ID=cds-WP_016193165.1;Parent=gene-LU604_RS01295;Dbxref=Genbank:WP_016193165.1;Name=WP_016193165.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013573566.1;locus_tag=LU604_RS01295;product=PTS ascorbate transporter subunit IIA;protein_id=WP_016193165.1;transl_table=11 NZ_CP089942.1 RefSeq gene 269042 269698 . + . ID=gene-LU604_RS01300;Name=LU604_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01300;old_locus_tag=LU604_01300 NZ_CP089942.1 Protein Homology CDS 269042 269698 . + 0 ID=cds-WP_016193166.1;Parent=gene-LU604_RS01300;Dbxref=Genbank:WP_016193166.1;Name=WP_016193166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014333496.1;locus_tag=LU604_RS01300;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_016193166.1;transl_table=11 NZ_CP089942.1 RefSeq gene 269708 270568 . + . ID=gene-LU604_RS01305;Name=LU604_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01305;old_locus_tag=LU604_01305 NZ_CP089942.1 Protein Homology CDS 269708 270568 . + 0 ID=cds-WP_233479697.1;Parent=gene-LU604_RS01305;Dbxref=Genbank:WP_233479697.1;Name=WP_233479697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193167.1;locus_tag=LU604_RS01305;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_233479697.1;transl_table=11 NZ_CP089942.1 RefSeq gene 270565 271254 . + . ID=gene-LU604_RS01310;Name=LU604_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01310;old_locus_tag=LU604_01310 NZ_CP089942.1 Protein Homology CDS 270565 271254 . + 0 ID=cds-WP_233479698.1;Parent=gene-LU604_RS01310;Dbxref=Genbank:WP_233479698.1;Name=WP_233479698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014333498.1;locus_tag=LU604_RS01310;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_233479698.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 271415 271837 . + . ID=gene-LU604_RS01315;Name=LU604_RS01315;end_range=271837,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01315;old_locus_tag=LU604_01315;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 271415 271837 . + 0 ID=cds-LU604_RS01315;Parent=gene-LU604_RS01315;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=271837,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200936.1;locus_tag=LU604_RS01315;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 271907 272642 . + . ID=gene-LU604_RS01320;Name=LU604_RS01320;end_range=272642,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01320;old_locus_tag=LU604_01320;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 271907 272642 . + 0 ID=cds-LU604_RS01320;Parent=gene-LU604_RS01320;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=272642,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315785.1;locus_tag=LU604_RS01320;partial=true;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 272960 273082 . - . ID=gene-LU604_RS26870;Name=LU604_RS26870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26870 NZ_CP089942.1 GeneMarkS-2+ CDS 272960 273082 . - 0 ID=cds-WP_256371728.1;Parent=gene-LU604_RS26870;Dbxref=Genbank:WP_256371728.1;Name=WP_256371728.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26870;product=hypothetical protein;protein_id=WP_256371728.1;transl_table=11 NZ_CP089942.1 cmsearch riboswitch 273523 273595 . + . ID=id-NZ_CP089942.1:273523..273595;Dbxref=RFAM:RF01734;Note=Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride%3B They are found in a wide variety of bacteria and archaea;bound_moiety=fluoride;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP089942.1 RefSeq gene 273674 274054 . + . ID=gene-LU604_RS01325;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=LU604_RS01325;old_locus_tag=LU604_01325 NZ_CP089942.1 Protein Homology CDS 273674 274054 . + 0 ID=cds-WP_233479699.1;Parent=gene-LU604_RS01325;Dbxref=Genbank:WP_233479699.1;Name=WP_233479699.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192839.1;locus_tag=LU604_RS01325;product=fluoride efflux transporter CrcB;protein_id=WP_233479699.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 274131 274466 . - . ID=gene-LU604_RS01330;Name=LU604_RS01330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01330;old_locus_tag=LU604_01330;pseudo=true NZ_CP089942.1 Protein Homology CDS 274131 274466 . - 0 ID=cds-LU604_RS01330;Parent=gene-LU604_RS01330;Note=internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.2;locus_tag=LU604_RS01330;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 274498 274638 . - . ID=gene-LU604_RS26875;Name=LU604_RS26875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26875 NZ_CP089942.1 Protein Homology CDS 274498 274638 . - 0 ID=cds-WP_252120232.1;Parent=gene-LU604_RS26875;Dbxref=Genbank:WP_252120232.1;Name=WP_252120232.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.2;locus_tag=LU604_RS26875;product=MFS transporter;protein_id=WP_252120232.1;transl_table=11 NZ_CP089942.1 RefSeq gene 274650 274946 . - . ID=gene-LU604_RS01335;Name=LU604_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01335;old_locus_tag=LU604_01335 NZ_CP089942.1 Protein Homology CDS 274650 274946 . - 0 ID=cds-WP_233479700.1;Parent=gene-LU604_RS01335;Dbxref=Genbank:WP_233479700.1;Name=WP_233479700.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.2;locus_tag=LU604_RS01335;product=MFS transporter;protein_id=WP_233479700.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 274953 275255 . - . ID=gene-LU604_RS01340;Name=LU604_RS01340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01340;old_locus_tag=LU604_01340;pseudo=true NZ_CP089942.1 Protein Homology CDS 274953 275255 . - 0 ID=cds-LU604_RS01340;Parent=gene-LU604_RS01340;Note=internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.2;locus_tag=LU604_RS01340;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 275826 276317 . + . ID=gene-LU604_RS01345;Name=LU604_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01345;old_locus_tag=LU604_01345 NZ_CP089942.1 GeneMarkS-2+ CDS 275826 276317 . + 0 ID=cds-WP_233481456.1;Parent=gene-LU604_RS01345;Dbxref=Genbank:WP_233481456.1;Name=WP_233481456.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01345;product=hypothetical protein;protein_id=WP_233481456.1;transl_table=11 NZ_CP089942.1 RefSeq gene 276308 282487 . + . ID=gene-LU604_RS01350;Name=LU604_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01350;old_locus_tag=LU604_01350 NZ_CP089942.1 Protein Homology CDS 276308 282487 . + 0 ID=cds-WP_233481457.1;Parent=gene-LU604_RS01350;Dbxref=Genbank:WP_233481457.1;Name=WP_233481457.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF006608.0;locus_tag=LU604_RS01350;product=hypothetical protein;protein_id=WP_233481457.1;transl_table=11 NZ_CP089942.1 RefSeq gene 282804 282974 . - . ID=gene-LU604_RS01355;Name=LU604_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01355;old_locus_tag=LU604_01355 NZ_CP089942.1 GeneMarkS-2+ CDS 282804 282974 . - 0 ID=cds-WP_233481458.1;Parent=gene-LU604_RS01355;Dbxref=Genbank:WP_233481458.1;Name=WP_233481458.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01355;product=hypothetical protein;protein_id=WP_233481458.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 283074 283223 . + . ID=gene-LU604_RS01360;Name=LU604_RS01360;end_range=283223,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01360;old_locus_tag=LU604_01360;partial=true;pseudo=true;start_range=.,283074 NZ_CP089942.1 Protein Homology CDS 283074 283223 . + 0 ID=cds-LU604_RS01360;Parent=gene-LU604_RS01360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=283223,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=LU604_RS01360;partial=true;product=transposase;pseudo=true;start_range=.,283074;transl_table=11 NZ_CP089942.1 RefSeq gene 283357 284463 . - . ID=gene-LU604_RS01365;Name=LU604_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01365;old_locus_tag=LU604_01365 NZ_CP089942.1 Protein Homology CDS 283357 284463 . - 0 ID=cds-WP_233479702.1;Parent=gene-LU604_RS01365;Dbxref=Genbank:WP_233479702.1;Name=WP_233479702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509041.1;locus_tag=LU604_RS01365;product=beta-propeller fold lactonase family protein;protein_id=WP_233479702.1;transl_table=11 NZ_CP089942.1 RefSeq gene 284460 284645 . - . ID=gene-LU604_RS01370;Name=LU604_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01370;old_locus_tag=LU604_01370 NZ_CP089942.1 GeneMarkS-2+ CDS 284460 284645 . - 0 ID=cds-WP_233481459.1;Parent=gene-LU604_RS01370;Dbxref=Genbank:WP_233481459.1;Name=WP_233481459.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01370;product=hypothetical protein;protein_id=WP_233481459.1;transl_table=11 NZ_CP089942.1 RefSeq gene 284635 284811 . - . ID=gene-LU604_RS01375;Name=LU604_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01375;old_locus_tag=LU604_01375 NZ_CP089942.1 GeneMarkS-2+ CDS 284635 284811 . - 0 ID=cds-WP_161796999.1;Parent=gene-LU604_RS01375;Dbxref=Genbank:WP_161796999.1;Name=WP_161796999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01375;product=hypothetical protein;protein_id=WP_161796999.1;transl_table=11 NZ_CP089942.1 RefSeq gene 285071 285667 . - . ID=gene-LU604_RS01380;Name=LU604_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01380;old_locus_tag=LU604_01380 NZ_CP089942.1 Protein Homology CDS 285071 285667 . - 0 ID=cds-WP_016193254.1;Parent=gene-LU604_RS01380;Dbxref=Genbank:WP_016193254.1;Name=WP_016193254.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121032.1;locus_tag=LU604_RS01380;product=YhgN family NAAT transporter;protein_id=WP_016193254.1;transl_table=11 NZ_CP089942.1 RefSeq gene 285935 287044 . + . ID=gene-LU604_RS01385;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=LU604_RS01385;old_locus_tag=LU604_01385 NZ_CP089942.1 Protein Homology CDS 285935 287044 . + 0 ID=cds-WP_233479703.1;Parent=gene-LU604_RS01385;Dbxref=Genbank:WP_233479703.1;Name=WP_233479703.1;Ontology_term=GO:0009089,GO:0004073;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160770.1;locus_tag=LU604_RS01385;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_233479703.1;transl_table=11 NZ_CP089942.1 RefSeq gene 287137 287834 . + . ID=gene-LU604_RS01390;Name=LU604_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01390;old_locus_tag=LU604_01390 NZ_CP089942.1 Protein Homology CDS 287137 287398 . + 0 ID=cds-WP_233479704.1;Parent=gene-LU604_RS01390;Dbxref=Genbank:WP_233479704.1;Name=WP_233479704.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS01390;product=IS1 family transposase;protein_id=WP_233479704.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 287398 287834 . + 2 ID=cds-WP_233479704.1;Parent=gene-LU604_RS01390;Dbxref=Genbank:WP_233479704.1;Name=WP_233479704.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS01390;product=IS1 family transposase;protein_id=WP_233479704.1;transl_table=11 NZ_CP089942.1 RefSeq gene 287962 288237 . - . ID=gene-LU604_RS01395;Name=LU604_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01395;old_locus_tag=LU604_01395 NZ_CP089942.1 Protein Homology CDS 287962 288237 . - 0 ID=cds-WP_233479705.1;Parent=gene-LU604_RS01395;Dbxref=Genbank:WP_233479705.1;Name=WP_233479705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192653.1;locus_tag=LU604_RS01395;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_233479705.1;transl_table=11 NZ_CP089942.1 RefSeq gene 288224 288424 . - . ID=gene-LU604_RS01400;Name=LU604_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01400;old_locus_tag=LU604_01400 NZ_CP089942.1 Protein Homology CDS 288224 288424 . - 0 ID=cds-WP_016192654.1;Parent=gene-LU604_RS01400;Dbxref=Genbank:WP_016192654.1;Name=WP_016192654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318280.1;locus_tag=LU604_RS01400;product=hypothetical protein;protein_id=WP_016192654.1;transl_table=11 NZ_CP089942.1 RefSeq gene 288721 289074 . + . ID=gene-LU604_RS01405;Name=LU604_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01405;old_locus_tag=LU604_01405 NZ_CP089942.1 Protein Homology CDS 288721 289074 . + 0 ID=cds-WP_016192655.1;Parent=gene-LU604_RS01405;Dbxref=Genbank:WP_016192655.1;Name=WP_016192655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001242998.1;locus_tag=LU604_RS01405;product=RAQPRD family integrative conjugative element protein;protein_id=WP_016192655.1;transl_table=11 NZ_CP089942.1 RefSeq gene 289075 289203 . + . ID=gene-LU604_RS01410;Name=LU604_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01410;old_locus_tag=LU604_01410 NZ_CP089942.1 Protein Homology CDS 289075 289203 . + 0 ID=cds-WP_233479706.1;Parent=gene-LU604_RS01410;Dbxref=Genbank:WP_233479706.1;Name=WP_233479706.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023090.2;locus_tag=LU604_RS01410;product=DUF3262 family protein;protein_id=WP_233479706.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 289240 289617 . + . ID=gene-LU604_RS01415;Name=LU604_RS01415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01415;old_locus_tag=LU604_01415;pseudo=true NZ_CP089942.1 Protein Homology CDS 289240 289617 . + 0 ID=cds-LU604_RS01415;Parent=gene-LU604_RS01415;Note=internal stop;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192657.1;locus_tag=LU604_RS01415;product=TIGR03745 family integrating conjugative element membrane protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 289629 289718 . + . ID=gene-LU604_RS01420;Name=LU604_RS01420;end_range=289718,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01420;old_locus_tag=LU604_01420;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 289629 289718 . + 0 ID=cds-LU604_RS01420;Parent=gene-LU604_RS01420;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=289718,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228805.1;locus_tag=LU604_RS01420;partial=true;product=DUF3487 family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 289804 290670 . + . ID=gene-LU604_RS01425;Name=LU604_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01425;old_locus_tag=LU604_01425 NZ_CP089942.1 Protein Homology CDS 289804 290670 . + 0 ID=cds-WP_233479707.1;Parent=gene-LU604_RS01425;Dbxref=Genbank:WP_233479707.1;Name=WP_233479707.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192659.1;locus_tag=LU604_RS01425;product=TIGR03749 family integrating conjugative element protein;protein_id=WP_233479707.1;transl_table=11 NZ_CP089942.1 RefSeq gene 290679 292193 . + . ID=gene-LU604_RS01430;Name=LU604_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01430;old_locus_tag=LU604_01430 NZ_CP089942.1 Protein Homology CDS 290679 292193 . + 0 ID=cds-WP_233480720.1;Parent=gene-LU604_RS01430;Dbxref=Genbank:WP_233480720.1;Name=WP_233480720.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539520.1;locus_tag=LU604_RS01430;product=TIGR03752 family integrating conjugative element protein;protein_id=WP_233480720.1;transl_table=11 NZ_CP089942.1 RefSeq gene 292205 292465 . + . ID=gene-LU604_RS01435;Name=LU604_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01435;old_locus_tag=LU604_01435 NZ_CP089942.1 Protein Homology CDS 292205 292465 . + 0 ID=cds-WP_152664198.1;Parent=gene-LU604_RS01435;Dbxref=Genbank:WP_152664198.1;Name=WP_152664198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193251.1;locus_tag=LU604_RS01435;product=hypothetical protein;protein_id=WP_152664198.1;transl_table=11 NZ_CP089942.1 RefSeq gene 292452 292856 . + . ID=gene-LU604_RS01440;Name=LU604_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01440;old_locus_tag=LU604_01440 NZ_CP089942.1 Protein Homology CDS 292452 292856 . + 0 ID=cds-WP_233479708.1;Parent=gene-LU604_RS01440;Dbxref=Genbank:WP_233479708.1;Name=WP_233479708.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192002.1;locus_tag=LU604_RS01440;product=TIGR03751 family conjugal transfer lipoprotein;protein_id=WP_233479708.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 292856 295667 . + . ID=gene-LU604_RS01445;Name=LU604_RS01445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01445;old_locus_tag=LU604_01445;pseudo=true NZ_CP089942.1 Protein Homology CDS 292856 295667 . + 0 ID=cds-LU604_RS01445;Parent=gene-LU604_RS01445;Note=frameshifted;Ontology_term=GO:0008150,GO:0005524,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=ATP binding|0005524||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012822421.1;locus_tag=LU604_RS01445;product=conjugative transfer ATPase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 295664 296068 . + . ID=gene-LU604_RS01450;Name=LU604_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01450;old_locus_tag=LU604_01450 NZ_CP089942.1 Protein Homology CDS 295664 296068 . + 0 ID=cds-WP_016192058.1;Parent=gene-LU604_RS01450;Dbxref=Genbank:WP_016192058.1;Name=WP_016192058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192058.1;locus_tag=LU604_RS01450;product=hypothetical protein;protein_id=WP_016192058.1;transl_table=11 NZ_CP089942.1 RefSeq gene 296153 296572 . - . ID=gene-LU604_RS01455;Name=LU604_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01455;old_locus_tag=LU604_01455 NZ_CP089942.1 GeneMarkS-2+ CDS 296153 296572 . - 0 ID=cds-WP_046372037.1;Parent=gene-LU604_RS01455;Dbxref=Genbank:WP_046372037.1;Name=WP_046372037.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01455;product=hypothetical protein;protein_id=WP_046372037.1;transl_table=11 NZ_CP089942.1 RefSeq gene 296588 297262 . - . ID=gene-LU604_RS01460;Name=LU604_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01460;old_locus_tag=LU604_01460 NZ_CP089942.1 Protein Homology CDS 296588 297262 . - 0 ID=cds-WP_233479709.1;Parent=gene-LU604_RS01460;Dbxref=Genbank:WP_233479709.1;Name=WP_233479709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009637758.1;locus_tag=LU604_RS01460;product=hypothetical protein;protein_id=WP_233479709.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 297543 298080 . + . ID=gene-LU604_RS01465;Name=LU604_RS01465;end_range=298080,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01465;old_locus_tag=LU604_01465;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 297543 298080 . + 0 ID=cds-LU604_RS01465;Parent=gene-LU604_RS01465;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=298080,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372623.1;locus_tag=LU604_RS01465;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 298115 298459 . + . ID=gene-LU604_RS01470;Name=LU604_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01470;old_locus_tag=LU604_01470 NZ_CP089942.1 Protein Homology CDS 298115 298459 . + 0 ID=cds-WP_233479710.1;Parent=gene-LU604_RS01470;Dbxref=Genbank:WP_233479710.1;Name=WP_233479710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012822433.1;locus_tag=LU604_RS01470;product=TIGR03757 family integrating conjugative element protein;protein_id=WP_233479710.1;transl_table=11 NZ_CP089942.1 RefSeq gene 298456 299427 . + . ID=gene-LU604_RS01475;Name=LU604_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01475;old_locus_tag=LU604_01475 NZ_CP089942.1 Protein Homology CDS 298456 299427 . + 0 ID=cds-WP_233479711.1;Parent=gene-LU604_RS01475;Dbxref=Genbank:WP_233479711.1;Name=WP_233479711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372625.1;locus_tag=LU604_RS01475;product=TIGR03756 family integrating conjugative element protein;protein_id=WP_233479711.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 299439 300143 . + . ID=gene-LU604_RS01480;Name=LU604_RS01480;end_range=300143,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01480;old_locus_tag=LU604_01480;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 299439 300143 . + 0 ID=cds-LU604_RS01480;Parent=gene-LU604_RS01480;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=300143,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012601736.1;locus_tag=LU604_RS01480;partial=true;product=integrating conjugative element protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 300271 300606 . + . ID=gene-LU604_RS01485;Name=LU604_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01485;old_locus_tag=LU604_01485 NZ_CP089942.1 Protein Homology CDS 300271 300606 . + 0 ID=cds-WP_233479712.1;Parent=gene-LU604_RS01485;Dbxref=Genbank:WP_233479712.1;Name=WP_233479712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192757.1;locus_tag=LU604_RS01485;product=hypothetical protein;protein_id=WP_233479712.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 300617 301381 . + . ID=gene-LU604_RS01490;Name=LU604_RS01490;end_range=301381,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01490;old_locus_tag=LU604_01490;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 300617 301381 . + 0 ID=cds-LU604_RS01490;Parent=gene-LU604_RS01490;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=301381,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372628.1;locus_tag=LU604_RS01490;partial=true;product=conjugal transfer protein TraG N-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 301714 302733 . - . ID=gene-LU604_RS01495;Name=LU604_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01495;old_locus_tag=LU604_01495 NZ_CP089942.1 Protein Homology CDS 301714 302733 . - 0 ID=cds-WP_046371854.1;Parent=gene-LU604_RS01495;Dbxref=Genbank:WP_046371854.1;Name=WP_046371854.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017371518.1;locus_tag=LU604_RS01495;product=tyrosine-type recombinase/integrase;protein_id=WP_046371854.1;transl_table=11 NZ_CP089942.1 RefSeq gene 302818 303099 . - . ID=gene-LU604_RS01500;Name=LU604_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01500;old_locus_tag=LU604_01500 NZ_CP089942.1 Protein Homology CDS 302818 303099 . - 0 ID=cds-WP_233479713.1;Parent=gene-LU604_RS01500;Dbxref=Genbank:WP_233479713.1;Name=WP_233479713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536686.1;locus_tag=LU604_RS01500;product=helix-turn-helix transcriptional regulator;protein_id=WP_233479713.1;transl_table=11 NZ_CP089942.1 RefSeq gene 303205 303474 . + . ID=gene-LU604_RS01505;Name=LU604_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01505;old_locus_tag=LU604_01505 NZ_CP089942.1 GeneMarkS-2+ CDS 303205 303474 . + 0 ID=cds-WP_233479714.1;Parent=gene-LU604_RS01505;Dbxref=Genbank:WP_233479714.1;Name=WP_233479714.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01505;product=hypothetical protein;protein_id=WP_233479714.1;transl_table=11 NZ_CP089942.1 RefSeq gene 303601 304824 . - . ID=gene-LU604_RS01510;Name=LU604_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01510;old_locus_tag=LU604_01510 NZ_CP089942.1 Protein Homology CDS 303601 304824 . - 0 ID=cds-WP_233478977.1;Parent=gene-LU604_RS01510;Dbxref=Genbank:WP_233478977.1;Name=WP_233478977.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU604_RS01510;product=IS91 family transposase;protein_id=WP_233478977.1;transl_table=11 NZ_CP089942.1 RefSeq gene 305509 305679 . - . ID=gene-LU604_RS01515;Name=LU604_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01515;old_locus_tag=LU604_01515 NZ_CP089942.1 GeneMarkS-2+ CDS 305509 305679 . - 0 ID=cds-WP_233481460.1;Parent=gene-LU604_RS01515;Dbxref=Genbank:WP_233481460.1;Name=WP_233481460.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01515;product=hypothetical protein;protein_id=WP_233481460.1;transl_table=11 NZ_CP089942.1 RefSeq gene 306002 306238 . + . ID=gene-LU604_RS01520;Name=LU604_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01520;old_locus_tag=LU604_01520 NZ_CP089942.1 GeneMarkS-2+ CDS 306002 306238 . + 0 ID=cds-WP_040465953.1;Parent=gene-LU604_RS01520;Dbxref=Genbank:WP_040465953.1;Name=WP_040465953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01520;product=hypothetical protein;protein_id=WP_040465953.1;transl_table=11 NZ_CP089942.1 RefSeq gene 306408 306800 . + . ID=gene-LU604_RS01525;Name=LU604_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01525;old_locus_tag=LU604_01525 NZ_CP089942.1 Protein Homology CDS 306408 306800 . + 0 ID=cds-WP_040465952.1;Parent=gene-LU604_RS01525;Dbxref=Genbank:WP_040465952.1;Name=WP_040465952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001514713.1;locus_tag=LU604_RS01525;product=hypothetical protein;protein_id=WP_040465952.1;transl_table=11 NZ_CP089942.1 RefSeq gene 306870 307442 . + . ID=gene-LU604_RS01530;Name=LU604_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01530;old_locus_tag=LU604_01530 NZ_CP089942.1 Protein Homology CDS 306870 307442 . + 0 ID=cds-WP_016193244.1;Parent=gene-LU604_RS01530;Dbxref=Genbank:WP_016193244.1;Name=WP_016193244.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027788.2;locus_tag=LU604_RS01530;product=3'-5' exonuclease;protein_id=WP_016193244.1;transl_table=11 NZ_CP089942.1 RefSeq gene 307439 308281 . + . ID=gene-LU604_RS01535;Name=LU604_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01535;old_locus_tag=LU604_01535 NZ_CP089942.1 Protein Homology CDS 307439 308281 . + 0 ID=cds-WP_016193243.1;Parent=gene-LU604_RS01535;Dbxref=Genbank:WP_016193243.1;Name=WP_016193243.1;Ontology_term=GO:0006306,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117877.1;locus_tag=LU604_RS01535;product=Dam family site-specific DNA-(adenine-N6)-methyltransferase;protein_id=WP_016193243.1;transl_table=11 NZ_CP089942.1 RefSeq gene 308278 308484 . + . ID=gene-LU604_RS01540;Name=LU604_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01540;old_locus_tag=LU604_01540 NZ_CP089942.1 GeneMarkS-2+ CDS 308278 308484 . + 0 ID=cds-WP_016193242.1;Parent=gene-LU604_RS01540;Dbxref=Genbank:WP_016193242.1;Name=WP_016193242.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01540;product=hypothetical protein;protein_id=WP_016193242.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 308502 308768 . + . ID=gene-LU604_RS01545;Name=LU604_RS01545;end_range=308768,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01545;old_locus_tag=LU604_01545;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 308502 308768 . + 0 ID=cds-LU604_RS01545;Parent=gene-LU604_RS01545;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=308768,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022029.2;locus_tag=LU604_RS01545;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 308816 309058 . + . ID=gene-LU604_RS01550;Name=LU604_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01550;old_locus_tag=LU604_01550 NZ_CP089942.1 GeneMarkS-2+ CDS 308816 309058 . + 0 ID=cds-WP_016193223.1;Parent=gene-LU604_RS01550;Dbxref=Genbank:WP_016193223.1;Name=WP_016193223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01550;product=hypothetical protein;protein_id=WP_016193223.1;transl_table=11 NZ_CP089942.1 RefSeq gene 309131 309514 . + . ID=gene-LU604_RS01555;Name=LU604_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01555;old_locus_tag=LU604_01555 NZ_CP089942.1 GeneMarkS-2+ CDS 309131 309514 . + 0 ID=cds-WP_016193222.1;Parent=gene-LU604_RS01555;Dbxref=Genbank:WP_016193222.1;Name=WP_016193222.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01555;product=hypothetical protein;protein_id=WP_016193222.1;transl_table=11 NZ_CP089942.1 RefSeq gene 309514 312009 . + . ID=gene-LU604_RS01560;Name=LU604_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01560;old_locus_tag=LU604_01560 NZ_CP089942.1 Protein Homology CDS 309514 312009 . + 0 ID=cds-WP_052734706.1;Parent=gene-LU604_RS01560;Dbxref=Genbank:WP_052734706.1;Name=WP_052734706.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015871545.1;locus_tag=LU604_RS01560;product=replication endonuclease;protein_id=WP_052734706.1;transl_table=11 NZ_CP089942.1 RefSeq gene 311975 312400 . + . ID=gene-LU604_RS01565;Name=LU604_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01565;old_locus_tag=LU604_01565 NZ_CP089942.1 GeneMarkS-2+ CDS 311975 312400 . + 0 ID=cds-WP_233479718.1;Parent=gene-LU604_RS01565;Dbxref=Genbank:WP_233479718.1;Name=WP_233479718.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01565;product=hypothetical protein;protein_id=WP_233479718.1;transl_table=11 NZ_CP089942.1 RefSeq gene 312456 312731 . + . ID=gene-LU604_RS01570;Name=LU604_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01570;old_locus_tag=LU604_01570 NZ_CP089942.1 Protein Homology CDS 312456 312731 . + 0 ID=cds-WP_233479719.1;Parent=gene-LU604_RS01570;Dbxref=Genbank:WP_233479719.1;Name=WP_233479719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917023.1;locus_tag=LU604_RS01570;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_233479719.1;transl_table=11 NZ_CP089942.1 RefSeq gene 312728 313087 . + . ID=gene-LU604_RS01575;Name=LU604_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01575;old_locus_tag=LU604_01575 NZ_CP089942.1 Protein Homology CDS 312728 313087 . + 0 ID=cds-WP_046371849.1;Parent=gene-LU604_RS01575;Dbxref=Genbank:WP_046371849.1;Name=WP_046371849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181489.1;locus_tag=LU604_RS01575;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_046371849.1;transl_table=11 NZ_CP089942.1 RefSeq gene 313337 314032 . + . ID=gene-LU604_RS01580;Name=LU604_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01580;old_locus_tag=LU604_01580 NZ_CP089942.1 Protein Homology CDS 313337 314032 . + 0 ID=cds-WP_233479720.1;Parent=gene-LU604_RS01580;Dbxref=Genbank:WP_233479720.1;Name=WP_233479720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155224.1;locus_tag=LU604_RS01580;product=DNA adenine methylase;protein_id=WP_233479720.1;transl_table=11 NZ_CP089942.1 RefSeq gene 314099 314320 . + . ID=gene-LU604_RS01585;Name=LU604_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01585;old_locus_tag=LU604_01585 NZ_CP089942.1 Protein Homology CDS 314099 314320 . + 0 ID=cds-WP_006117881.1;Parent=gene-LU604_RS01585;Dbxref=Genbank:WP_006117881.1;Name=WP_006117881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016941532.1;locus_tag=LU604_RS01585;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_006117881.1;transl_table=11 NZ_CP089942.1 RefSeq gene 314317 314700 . + . ID=gene-LU604_RS01590;Name=LU604_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01590;old_locus_tag=LU604_01590 NZ_CP089942.1 Protein Homology CDS 314317 314700 . + 0 ID=cds-WP_046371846.1;Parent=gene-LU604_RS01590;Dbxref=Genbank:WP_046371846.1;Name=WP_046371846.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117882.1;locus_tag=LU604_RS01590;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_046371846.1;transl_table=11 NZ_CP089942.1 RefSeq gene 315186 315689 . + . ID=gene-LU604_RS01595;Name=LU604_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01595;old_locus_tag=LU604_01595 NZ_CP089942.1 Protein Homology CDS 315186 315689 . + 0 ID=cds-WP_233479721.1;Parent=gene-LU604_RS01595;Dbxref=Genbank:WP_233479721.1;Name=WP_233479721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193219.1;locus_tag=LU604_RS01595;product=hypothetical protein;protein_id=WP_233479721.1;transl_table=11 NZ_CP089942.1 RefSeq gene 315760 316818 . - . ID=gene-LU604_RS01600;Name=LU604_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01600;old_locus_tag=LU604_01600 NZ_CP089942.1 Protein Homology CDS 315760 316818 . - 0 ID=cds-WP_016193218.1;Parent=gene-LU604_RS01600;Dbxref=Genbank:WP_016193218.1;Name=WP_016193218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072483.1;locus_tag=LU604_RS01600;product=phage portal protein;protein_id=WP_016193218.1;transl_table=11 NZ_CP089942.1 RefSeq gene 316818 318548 . - . ID=gene-LU604_RS01605;Name=LU604_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01605;old_locus_tag=LU604_01605 NZ_CP089942.1 Protein Homology CDS 316818 318548 . - 0 ID=cds-WP_233481461.1;Parent=gene-LU604_RS01605;Dbxref=Genbank:WP_233481461.1;Name=WP_233481461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855478.1;locus_tag=LU604_RS01605;product=terminase family protein;protein_id=WP_233481461.1;transl_table=11 NZ_CP089942.1 RefSeq gene 318708 319544 . + . ID=gene-LU604_RS01610;Name=LU604_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01610;old_locus_tag=LU604_01610 NZ_CP089942.1 Protein Homology CDS 318708 319544 . + 0 ID=cds-WP_016193215.1;Parent=gene-LU604_RS01610;Dbxref=Genbank:WP_016193215.1;Name=WP_016193215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500366.1;locus_tag=LU604_RS01610;product=GPO family capsid scaffolding protein;protein_id=WP_016193215.1;transl_table=11 NZ_CP089942.1 RefSeq gene 319568 320617 . + . ID=gene-LU604_RS01615;Name=LU604_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01615;old_locus_tag=LU604_01615 NZ_CP089942.1 Protein Homology CDS 319568 320617 . + 0 ID=cds-WP_016193214.1;Parent=gene-LU604_RS01615;Dbxref=Genbank:WP_016193214.1;Name=WP_016193214.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193214.1;locus_tag=LU604_RS01615;product=phage major capsid protein%2C P2 family;protein_id=WP_016193214.1;transl_table=11 NZ_CP089942.1 RefSeq gene 320663 321520 . + . ID=gene-LU604_RS01620;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=LU604_RS01620;old_locus_tag=LU604_01620 NZ_CP089942.1 Protein Homology CDS 320663 321520 . + 0 ID=cds-WP_233479724.1;Parent=gene-LU604_RS01620;Dbxref=Genbank:WP_233479724.1;Name=WP_233479724.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072479.1;locus_tag=LU604_RS01620;product=phage terminase small subunit;protein_id=WP_233479724.1;transl_table=11 NZ_CP089942.1 RefSeq gene 321617 322141 . + . ID=gene-LU604_RS01625;Name=LU604_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01625;old_locus_tag=LU604_01625 NZ_CP089942.1 Protein Homology CDS 321617 322141 . + 0 ID=cds-WP_016193212.1;Parent=gene-LU604_RS01625;Dbxref=Genbank:WP_016193212.1;Name=WP_016193212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193212.1;locus_tag=LU604_RS01625;product=head completion/stabilization protein;protein_id=WP_016193212.1;transl_table=11 NZ_CP089942.1 RefSeq gene 322141 322341 . + . ID=gene-LU604_RS01630;Name=LU604_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01630;old_locus_tag=LU604_01630 NZ_CP089942.1 Protein Homology CDS 322141 322341 . + 0 ID=cds-WP_016193211.1;Parent=gene-LU604_RS01630;Dbxref=Genbank:WP_016193211.1;Name=WP_016193211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537159.1;locus_tag=LU604_RS01630;product=tail protein X;protein_id=WP_016193211.1;transl_table=11 NZ_CP089942.1 RefSeq gene 322332 322634 . + . ID=gene-LU604_RS01635;Name=LU604_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01635;old_locus_tag=LU604_01635 NZ_CP089942.1 Protein Homology CDS 322332 322634 . + 0 ID=cds-WP_016193210.1;Parent=gene-LU604_RS01635;Dbxref=Genbank:WP_016193210.1;Name=WP_016193210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003835852.1;locus_tag=LU604_RS01635;product=hypothetical protein;protein_id=WP_016193210.1;transl_table=11 NZ_CP089942.1 RefSeq gene 322618 323163 . + . ID=gene-LU604_RS01640;Name=LU604_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01640;old_locus_tag=LU604_01640 NZ_CP089942.1 Protein Homology CDS 322618 323163 . + 0 ID=cds-WP_016193209.1;Parent=gene-LU604_RS01640;Dbxref=Genbank:WP_016193209.1;Name=WP_016193209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114933.1;locus_tag=LU604_RS01640;product=lysozyme;protein_id=WP_016193209.1;transl_table=11 NZ_CP089942.1 RefSeq gene 323160 323675 . + . ID=gene-LU604_RS01645;Name=LU604_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01645;old_locus_tag=LU604_01645 NZ_CP089942.1 Protein Homology CDS 323160 323675 . + 0 ID=cds-WP_016193208.1;Parent=gene-LU604_RS01645;Dbxref=Genbank:WP_016193208.1;Name=WP_016193208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246755.1;locus_tag=LU604_RS01645;product=DUF2514 family protein;protein_id=WP_016193208.1;transl_table=11 NZ_CP089942.1 RefSeq gene 323680 324141 . + . ID=gene-LU604_RS01650;Name=LU604_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01650;old_locus_tag=LU604_01650 NZ_CP089942.1 Protein Homology CDS 323680 324141 . + 0 ID=cds-WP_016193207.1;Parent=gene-LU604_RS01650;Dbxref=Genbank:WP_016193207.1;Name=WP_016193207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019843881.1;locus_tag=LU604_RS01650;product=phage tail protein;protein_id=WP_016193207.1;transl_table=11 NZ_CP089942.1 RefSeq gene 324138 324776 . + . ID=gene-LU604_RS01655;Name=LU604_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01655;old_locus_tag=LU604_01655 NZ_CP089942.1 Protein Homology CDS 324138 324776 . + 0 ID=cds-WP_016193206.1;Parent=gene-LU604_RS01655;Dbxref=Genbank:WP_016193206.1;Name=WP_016193206.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117895.1;locus_tag=LU604_RS01655;product=phage virion morphogenesis protein;protein_id=WP_016193206.1;transl_table=11 NZ_CP089942.1 RefSeq gene 324773 325348 . + . ID=gene-LU604_RS01660;Name=LU604_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01660;old_locus_tag=LU604_01660 NZ_CP089942.1 Protein Homology CDS 324773 325348 . + 0 ID=cds-WP_016193205.1;Parent=gene-LU604_RS01660;Dbxref=Genbank:WP_016193205.1;Name=WP_016193205.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072471.1;locus_tag=LU604_RS01660;product=phage baseplate assembly protein V;protein_id=WP_016193205.1;transl_table=11 NZ_CP089942.1 RefSeq gene 325345 325713 . + . ID=gene-LU604_RS01665;Name=LU604_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01665;old_locus_tag=LU604_01665 NZ_CP089942.1 Protein Homology CDS 325345 325713 . + 0 ID=cds-WP_016193204.1;Parent=gene-LU604_RS01665;Dbxref=Genbank:WP_016193204.1;Name=WP_016193204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016940969.1;locus_tag=LU604_RS01665;product=GPW/gp25 family protein;protein_id=WP_016193204.1;transl_table=11 NZ_CP089942.1 RefSeq gene 325700 326596 . + . ID=gene-LU604_RS01670;Name=LU604_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01670;old_locus_tag=LU604_01670 NZ_CP089942.1 Protein Homology CDS 325700 326596 . + 0 ID=cds-WP_016193203.1;Parent=gene-LU604_RS01670;Dbxref=Genbank:WP_016193203.1;Name=WP_016193203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117898.1;locus_tag=LU604_RS01670;product=baseplate J/gp47 family protein;protein_id=WP_016193203.1;transl_table=11 NZ_CP089942.1 RefSeq gene 326589 327203 . + . ID=gene-LU604_RS01675;Name=LU604_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01675;old_locus_tag=LU604_01675 NZ_CP089942.1 Protein Homology CDS 326589 327203 . + 0 ID=cds-WP_016193202.1;Parent=gene-LU604_RS01675;Dbxref=Genbank:WP_016193202.1;Name=WP_016193202.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001063585.1;locus_tag=LU604_RS01675;product=phage tail protein I;protein_id=WP_016193202.1;transl_table=11 NZ_CP089942.1 RefSeq gene 327193 328194 . + . ID=gene-LU604_RS01680;Name=LU604_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01680;old_locus_tag=LU604_01680 NZ_CP089942.1 Protein Homology CDS 327193 328194 . + 0 ID=cds-WP_233479729.1;Parent=gene-LU604_RS01680;Dbxref=Genbank:WP_233479729.1;Name=WP_233479729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193201.1;locus_tag=LU604_RS01680;product=phage tail protein;protein_id=WP_233479729.1;transl_table=11 NZ_CP089942.1 RefSeq gene 328194 328790 . + . ID=gene-LU604_RS01685;Name=LU604_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01685;old_locus_tag=LU604_01685 NZ_CP089942.1 Protein Homology CDS 328194 328790 . + 0 ID=cds-WP_016193200.1;Parent=gene-LU604_RS01685;Dbxref=Genbank:WP_016193200.1;Name=WP_016193200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243405.1;locus_tag=LU604_RS01685;product=tail fiber assembly protein;protein_id=WP_016193200.1;transl_table=11 NZ_CP089942.1 RefSeq gene 328945 329433 . - . ID=gene-LU604_RS01690;Name=LU604_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01690;old_locus_tag=LU604_01690 NZ_CP089942.1 Protein Homology CDS 328945 329433 . - 0 ID=cds-WP_016193199.1;Parent=gene-LU604_RS01690;Dbxref=Genbank:WP_016193199.1;Name=WP_016193199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001761054.1;locus_tag=LU604_RS01690;product=phage tail protein;protein_id=WP_016193199.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 329446 330555 . - . ID=gene-LU604_RS01695;Name=LU604_RS01695;end_range=330555,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01695;old_locus_tag=LU604_01695;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 329446 330555 . - 0 ID=cds-LU604_RS01695;Parent=gene-LU604_RS01695;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=330555,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000853438.1;locus_tag=LU604_RS01695;partial=true;product=phage tail tape measure protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 330483 331718 . - . ID=gene-LU604_RS01700;Name=LU604_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01700;old_locus_tag=LU604_01700 NZ_CP089942.1 Protein Homology CDS 330483 331718 . - 0 ID=cds-WP_233481637.1;Parent=gene-LU604_RS01700;Dbxref=Genbank:WP_233481637.1;Name=WP_233481637.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: protein motif:HMM:TIGR01760.1;locus_tag=LU604_RS01700;product=phage tail tape measure protein;protein_id=WP_233481637.1;transl_table=11 NZ_CP089942.1 RefSeq gene 332326 332481 . - . ID=gene-LU604_RS01705;Name=LU604_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01705;old_locus_tag=LU604_01705 NZ_CP089942.1 Protein Homology CDS 332326 332481 . - 0 ID=cds-WP_072052787.1;Parent=gene-LU604_RS01705;Dbxref=Genbank:WP_072052787.1;Name=WP_072052787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016940976.1;locus_tag=LU604_RS01705;product=GpE family phage tail protein;protein_id=WP_072052787.1;transl_table=11 NZ_CP089942.1 RefSeq gene 332487 332804 . - . ID=gene-LU604_RS01710;Name=LU604_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01710;old_locus_tag=LU604_01710 NZ_CP089942.1 Protein Homology CDS 332487 332804 . - 0 ID=cds-WP_046371823.1;Parent=gene-LU604_RS01710;Dbxref=Genbank:WP_046371823.1;Name=WP_046371823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072463.1;locus_tag=LU604_RS01710;product=phage tail assembly protein;protein_id=WP_046371823.1;transl_table=11 NZ_CP089942.1 RefSeq gene 332853 333368 . - . ID=gene-LU604_RS01715;Name=LU604_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01715;old_locus_tag=LU604_01715 NZ_CP089942.1 Protein Homology CDS 332853 333368 . - 0 ID=cds-WP_006117904.1;Parent=gene-LU604_RS01715;Dbxref=Genbank:WP_006117904.1;Name=WP_006117904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009486472.1;locus_tag=LU604_RS01715;product=phage major tail tube protein;protein_id=WP_006117904.1;transl_table=11 NZ_CP089942.1 RefSeq gene 333369 334550 . - . ID=gene-LU604_RS01720;Name=LU604_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01720;old_locus_tag=LU604_01720 NZ_CP089942.1 Protein Homology CDS 333369 334550 . - 0 ID=cds-WP_233479730.1;Parent=gene-LU604_RS01720;Dbxref=Genbank:WP_233479730.1;Name=WP_233479730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094145.1;locus_tag=LU604_RS01720;product=phage tail sheath family protein;protein_id=WP_233479730.1;transl_table=11 NZ_CP089942.1 RefSeq gene 334701 335837 . + . ID=gene-LU604_RS01725;Name=LU604_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01725;old_locus_tag=LU604_01725 NZ_CP089942.1 Protein Homology CDS 334701 335837 . + 0 ID=cds-WP_233479731.1;Parent=gene-LU604_RS01725;Dbxref=Genbank:WP_233479731.1;Name=WP_233479731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117906.1;locus_tag=LU604_RS01725;product=phage late control D family protein;protein_id=WP_233479731.1;transl_table=11 NZ_CP089942.1 RefSeq gene 335876 336124 . + . ID=gene-LU604_RS01730;Name=LU604_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01730;old_locus_tag=LU604_01730 NZ_CP089942.1 Protein Homology CDS 335876 336124 . + 0 ID=cds-WP_072052782.1;Parent=gene-LU604_RS01730;Dbxref=Genbank:WP_072052782.1;Name=WP_072052782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500389.1;locus_tag=LU604_RS01730;product=ogr/Delta-like zinc finger family protein;protein_id=WP_072052782.1;transl_table=11 NZ_CP089942.1 RefSeq gene 336306 336917 . + . ID=gene-LU604_RS01735;Name=LU604_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01735;old_locus_tag=LU604_01735 NZ_CP089942.1 Protein Homology CDS 336306 336917 . + 0 ID=cds-WP_233479732.1;Parent=gene-LU604_RS01735;Dbxref=Genbank:WP_233479732.1;Name=WP_233479732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095235.1;locus_tag=LU604_RS01735;product=hypothetical protein;protein_id=WP_233479732.1;transl_table=11 NZ_CP089942.1 RefSeq gene 337065 338015 . + . ID=gene-LU604_RS01740;Name=LU604_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01740;old_locus_tag=LU604_01740 NZ_CP089942.1 Protein Homology CDS 337065 338015 . + 0 ID=cds-WP_233479733.1;Parent=gene-LU604_RS01740;Dbxref=Genbank:WP_233479733.1;Name=WP_233479733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095237.1;locus_tag=LU604_RS01740;product=DUF1281 domain-containing protein;protein_id=WP_233479733.1;transl_table=11 NZ_CP089942.1 RefSeq gene 338143 338850 . + . ID=gene-LU604_RS01745;Name=LU604_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01745;old_locus_tag=LU604_01745 NZ_CP089942.1 Protein Homology CDS 338143 338850 . + 0 ID=cds-WP_233479734.1;Parent=gene-LU604_RS01745;Dbxref=Genbank:WP_233479734.1;Name=WP_233479734.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869813.1;locus_tag=LU604_RS01745;product=N-6 DNA methylase;protein_id=WP_233479734.1;transl_table=11 NZ_CP089942.1 RefSeq gene 339023 339457 . + . ID=gene-LU604_RS01750;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=LU604_RS01750;old_locus_tag=LU604_01750 NZ_CP089942.1 Protein Homology CDS 339023 339457 . + 0 ID=cds-WP_233479735.1;Parent=gene-LU604_RS01750;Dbxref=Genbank:WP_233479735.1;Name=WP_233479735.1;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606797.1;locus_tag=LU604_RS01750;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_233479735.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 339457 340721 . + . ID=gene-LU604_RS01755;Name=umuC;gbkey=Gene;gene=umuC;gene_biotype=pseudogene;locus_tag=LU604_RS01755;old_locus_tag=LU604_01755;pseudo=true NZ_CP089942.1 Protein Homology CDS 339457 340721 . + 0 ID=cds-LU604_RS01755;Parent=gene-LU604_RS01755;Note=frameshifted;Ontology_term=GO:0006281,GO:0003684;gbkey=CDS;gene=umuC;go_function=damaged DNA binding|0003684||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001766293.1;locus_tag=LU604_RS01755;product=translesion error-prone DNA polymerase V subunit UmuC;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 340859 341899 . + . ID=gene-LU604_RS01760;Name=LU604_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01760;old_locus_tag=LU604_01760 NZ_CP089942.1 Protein Homology CDS 340859 341899 . + 0 ID=cds-WP_233478553.1-2;Parent=gene-LU604_RS01760;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS01760;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 342128 342283 . - . ID=gene-LU604_RS01765;Name=LU604_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01765;old_locus_tag=LU604_01765 NZ_CP089942.1 GeneMarkS-2+ CDS 342128 342283 . - 0 ID=cds-WP_233479736.1;Parent=gene-LU604_RS01765;Dbxref=Genbank:WP_233479736.1;Name=WP_233479736.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01765;product=hypothetical protein;protein_id=WP_233479736.1;transl_table=11 NZ_CP089942.1 RefSeq gene 342377 342610 . - . ID=gene-LU604_RS01770;Name=LU604_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01770;old_locus_tag=LU604_01770 NZ_CP089942.1 GeneMarkS-2+ CDS 342377 342610 . - 0 ID=cds-WP_233479737.1;Parent=gene-LU604_RS01770;Dbxref=Genbank:WP_233479737.1;Name=WP_233479737.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01770;product=hypothetical protein;protein_id=WP_233479737.1;transl_table=11 NZ_CP089942.1 RefSeq gene 342651 343100 . - . ID=gene-LU604_RS01775;Name=LU604_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01775;old_locus_tag=LU604_01775 NZ_CP089942.1 Protein Homology CDS 342651 343100 . - 0 ID=cds-WP_233479738.1;Parent=gene-LU604_RS01775;Dbxref=Genbank:WP_233479738.1;Name=WP_233479738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001343340.1;locus_tag=LU604_RS01775;product=class I SAM-dependent methyltransferase;protein_id=WP_233479738.1;transl_table=11 NZ_CP089942.1 RefSeq gene 343093 343368 . - . ID=gene-LU604_RS01780;Name=LU604_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01780;old_locus_tag=LU604_01780 NZ_CP089942.1 GeneMarkS-2+ CDS 343093 343368 . - 0 ID=cds-WP_233479739.1;Parent=gene-LU604_RS01780;Dbxref=Genbank:WP_233479739.1;Name=WP_233479739.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01780;product=hypothetical protein;protein_id=WP_233479739.1;transl_table=11 NZ_CP089942.1 RefSeq gene 343361 343639 . - . ID=gene-LU604_RS01785;Name=LU604_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01785;old_locus_tag=LU604_01785 NZ_CP089942.1 GeneMarkS-2+ CDS 343361 343639 . - 0 ID=cds-WP_016192674.1;Parent=gene-LU604_RS01785;Dbxref=Genbank:WP_016192674.1;Name=WP_016192674.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01785;product=hypothetical protein;protein_id=WP_016192674.1;transl_table=11 NZ_CP089942.1 RefSeq gene 343677 343940 . - . ID=gene-LU604_RS01790;Name=LU604_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01790;old_locus_tag=LU604_01790 NZ_CP089942.1 Protein Homology CDS 343677 343940 . - 0 ID=cds-WP_233479740.1;Parent=gene-LU604_RS01790;Dbxref=Genbank:WP_233479740.1;Name=WP_233479740.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012354.2;locus_tag=LU604_RS01790;product=LysR family transcriptional regulator;protein_id=WP_233479740.1;transl_table=11 NZ_CP089942.1 RefSeq gene 343953 344495 . - . ID=gene-LU604_RS01795;Name=LU604_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01795;old_locus_tag=LU604_01795 NZ_CP089942.1 Protein Homology CDS 343953 344495 . - 0 ID=cds-WP_233479741.1;Parent=gene-LU604_RS01795;Dbxref=Genbank:WP_233479741.1;Name=WP_233479741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095246.1;locus_tag=LU604_RS01795;product=hypothetical protein;protein_id=WP_233479741.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 344550 344786 . - . ID=gene-LU604_RS01800;Name=LU604_RS01800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01800;old_locus_tag=LU604_01800;partial=true;pseudo=true;start_range=.,344550 NZ_CP089942.1 Protein Homology CDS 344550 344786 . - 0 ID=cds-LU604_RS01800;Parent=gene-LU604_RS01800;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106697.1;locus_tag=LU604_RS01800;partial=true;product=conjugal transfer protein TraF;pseudo=true;start_range=.,344550;transl_table=11 NZ_CP089942.1 RefSeq gene 344896 345864 . - . ID=gene-LU604_RS01805;Name=LU604_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01805;old_locus_tag=LU604_01805 NZ_CP089942.1 Protein Homology CDS 344896 345864 . - 0 ID=cds-WP_233479742.1;Parent=gene-LU604_RS01805;Dbxref=Genbank:WP_233479742.1;Name=WP_233479742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192678.1;locus_tag=LU604_RS01805;product=conjugal transfer protein TraE;protein_id=WP_233479742.1;transl_table=11 NZ_CP089942.1 RefSeq gene 346039 346596 . - . ID=gene-LU604_RS01810;Name=LU604_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01810;old_locus_tag=LU604_01810 NZ_CP089942.1 Protein Homology CDS 346039 346596 . - 0 ID=cds-WP_233479743.1;Parent=gene-LU604_RS01810;Dbxref=Genbank:WP_233479743.1;Name=WP_233479743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192683.1;locus_tag=LU604_RS01810;product=hypothetical protein;protein_id=WP_233479743.1;transl_table=11 NZ_CP089942.1 RefSeq gene 346784 347191 . + . ID=gene-LU604_RS01815;Name=LU604_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01815;old_locus_tag=LU604_01815 NZ_CP089942.1 GeneMarkS-2+ CDS 346784 347191 . + 0 ID=cds-WP_233481462.1;Parent=gene-LU604_RS01815;Dbxref=Genbank:WP_233481462.1;Name=WP_233481462.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01815;product=hypothetical protein;protein_id=WP_233481462.1;transl_table=11 NZ_CP089942.1 RefSeq gene 347094 347555 . + . ID=gene-LU604_RS01820;Name=LU604_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01820;old_locus_tag=LU604_01820 NZ_CP089942.1 Protein Homology CDS 347094 347555 . + 0 ID=cds-WP_233479745.1;Parent=gene-LU604_RS01820;Dbxref=Genbank:WP_233479745.1;Name=WP_233479745.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019153.2;locus_tag=LU604_RS01820;product=TraI domain-containing protein;protein_id=WP_233479745.1;transl_table=11 NZ_CP089942.1 RefSeq gene 347581 348309 . + . ID=gene-LU604_RS01825;Name=LU604_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01825;old_locus_tag=LU604_01825 NZ_CP089942.1 Protein Homology CDS 347581 348309 . + 0 ID=cds-WP_233479746.1;Parent=gene-LU604_RS01825;Dbxref=Genbank:WP_233479746.1;Name=WP_233479746.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019154.2;locus_tag=LU604_RS01825;product=DNA-binding domain-containing protein;protein_id=WP_233479746.1;transl_table=11 NZ_CP089942.1 RefSeq gene 348343 349302 . + . ID=gene-LU604_RS01830;Name=LU604_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01830;old_locus_tag=LU604_01830 NZ_CP089942.1 Protein Homology CDS 348343 349302 . + 0 ID=cds-WP_233479747.1;Parent=gene-LU604_RS01830;Dbxref=Genbank:WP_233479747.1;Name=WP_233479747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666840.1;locus_tag=LU604_RS01830;product=site-specific integrase;protein_id=WP_233479747.1;transl_table=11 NZ_CP089942.1 RefSeq gene 349543 349618 . - . ID=gene-LU604_RS01835;Name=LU604_RS01835;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS01835;old_locus_tag=LU604_01835 NZ_CP089942.1 tRNAscan-SE tRNA 349543 349618 . - . ID=rna-LU604_RS01835;Parent=gene-LU604_RS01835;anticodon=(pos:complement(349583..349585));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS01835;product=tRNA-Phe NZ_CP089942.1 tRNAscan-SE exon 349543 349618 . - . ID=exon-LU604_RS01835-1;Parent=rna-LU604_RS01835;anticodon=(pos:complement(349583..349585));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS01835;product=tRNA-Phe NZ_CP089942.1 RefSeq gene 349946 350230 . + . ID=gene-LU604_RS01840;Name=LU604_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01840;old_locus_tag=LU604_01840 NZ_CP089942.1 Protein Homology CDS 349946 350230 . + 0 ID=cds-WP_232426852.1;Parent=gene-LU604_RS01840;Dbxref=Genbank:WP_232426852.1;Name=WP_232426852.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017315.2;locus_tag=LU604_RS01840;product=PAAR domain-containing protein;protein_id=WP_232426852.1;transl_table=11 NZ_CP089942.1 RefSeq gene 350493 350741 . + . ID=gene-LU604_RS01845;Name=LU604_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01845;old_locus_tag=LU604_01845 NZ_CP089942.1 GeneMarkS-2+ CDS 350493 350741 . + 0 ID=cds-WP_233479749.1;Parent=gene-LU604_RS01845;Dbxref=Genbank:WP_233479749.1;Name=WP_233479749.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01845;product=hypothetical protein;protein_id=WP_233479749.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 351068 351853 . + . ID=gene-LU604_RS01850;Name=LU604_RS01850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01850;old_locus_tag=LU604_01850;pseudo=true NZ_CP089942.1 Protein Homology CDS 351068 351853 . + 0 ID=cds-LU604_RS01850;Parent=gene-LU604_RS01850;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS01850;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 351847 352544 . - . ID=gene-LU604_RS01855;Name=LU604_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01855;old_locus_tag=LU604_01855 NZ_CP089942.1 Protein Homology CDS 352283 352544 . - 0 ID=cds-WP_233479750.1;Parent=gene-LU604_RS01855;Dbxref=Genbank:WP_233479750.1;Name=WP_233479750.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS01855;product=IS1 family transposase;protein_id=WP_233479750.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 351847 352283 . - 2 ID=cds-WP_233479750.1;Parent=gene-LU604_RS01855;Dbxref=Genbank:WP_233479750.1;Name=WP_233479750.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS01855;product=IS1 family transposase;protein_id=WP_233479750.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 352716 353362 . + . ID=gene-LU604_RS01860;Name=LU604_RS01860;end_range=353362,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01860;old_locus_tag=LU604_01860;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 352716 353362 . + 0 ID=cds-LU604_RS01860;Parent=gene-LU604_RS01860;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=353362,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=LU604_RS01860;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 353541 355229 . - . ID=gene-LU604_RS01865;Name=LU604_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01865;old_locus_tag=LU604_01865 NZ_CP089942.1 Protein Homology CDS 353541 355229 . - 0 ID=cds-WP_233480723.1;Parent=gene-LU604_RS01865;Dbxref=Genbank:WP_233480723.1;Name=WP_233480723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017347390.1;locus_tag=LU604_RS01865;product=protein-disulfide reductase DsbD;protein_id=WP_233480723.1;transl_table=11 NZ_CP089942.1 RefSeq gene 355424 356725 . - . ID=gene-LU604_RS01870;Name=LU604_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01870;old_locus_tag=LU604_01870 NZ_CP089942.1 Protein Homology CDS 355424 356725 . - 0 ID=cds-WP_233479751.1;Parent=gene-LU604_RS01870;Dbxref=Genbank:WP_233479751.1;Name=WP_233479751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961959.1;locus_tag=LU604_RS01870;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_233479751.1;transl_table=11 NZ_CP089942.1 RefSeq gene 356841 356984 . - . ID=gene-LU604_RS01875;Name=LU604_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01875;old_locus_tag=LU604_01875 NZ_CP089942.1 GeneMarkS-2+ CDS 356841 356984 . - 0 ID=cds-WP_233479752.1;Parent=gene-LU604_RS01875;Dbxref=Genbank:WP_233479752.1;Name=WP_233479752.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01875;product=hypothetical protein;protein_id=WP_233479752.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 356989 357224 . - . ID=gene-LU604_RS01880;Name=LU604_RS01880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS01880;old_locus_tag=LU604_01880;partial=true;pseudo=true;start_range=.,356989 NZ_CP089942.1 Protein Homology CDS 356989 357224 . - 0 ID=cds-LU604_RS01880;Parent=gene-LU604_RS01880;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313147.2;locus_tag=LU604_RS01880;partial=true;product=lyase family protein;pseudo=true;start_range=.,356989;transl_table=11 NZ_CP089942.1 RefSeq gene 357572 358027 . + . ID=gene-LU604_RS01885;Name=LU604_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01885;old_locus_tag=LU604_01885 NZ_CP089942.1 Protein Homology CDS 357572 358027 . + 0 ID=cds-WP_233479753.1;Parent=gene-LU604_RS01885;Dbxref=Genbank:WP_233479753.1;Name=WP_233479753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190750.1;locus_tag=LU604_RS01885;product=FxsA family protein;protein_id=WP_233479753.1;transl_table=11 NZ_CP089942.1 RefSeq gene 358242 358535 . + . ID=gene-LU604_RS01890;Name=LU604_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01890;old_locus_tag=LU604_01890 NZ_CP089942.1 Protein Homology CDS 358242 358535 . + 0 ID=cds-WP_233480724.1;Parent=gene-LU604_RS01890;Dbxref=Genbank:WP_233480724.1;Name=WP_233480724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391824.1;locus_tag=LU604_RS01890;product=co-chaperone GroES;protein_id=WP_233480724.1;transl_table=11 NZ_CP089942.1 RefSeq gene 358581 360236 . + . ID=gene-LU604_RS01895;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=LU604_RS01895;old_locus_tag=LU604_01895 NZ_CP089942.1 Protein Homology CDS 358581 360236 . + 0 ID=cds-WP_233479754.1;Parent=gene-LU604_RS01895;Dbxref=Genbank:WP_233479754.1;Name=WP_233479754.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010427772.1;locus_tag=LU604_RS01895;product=chaperonin GroEL;protein_id=WP_233479754.1;transl_table=11 NZ_CP089942.1 RefSeq gene 360425 360775 . + . ID=gene-LU604_RS01900;Name=LU604_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01900;old_locus_tag=LU604_01900 NZ_CP089942.1 Protein Homology CDS 360425 360775 . + 0 ID=cds-WP_016190753.1;Parent=gene-LU604_RS01900;Dbxref=Genbank:WP_016190753.1;Name=WP_016190753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014538509.1;locus_tag=LU604_RS01900;product=DUF4156 domain-containing protein;protein_id=WP_016190753.1;transl_table=11 NZ_CP089942.1 RefSeq gene 361153 362181 . - . ID=gene-LU604_RS01905;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=LU604_RS01905;old_locus_tag=LU604_01905 NZ_CP089942.1 Protein Homology CDS 361153 362181 . - 0 ID=cds-WP_233479755.1;Parent=gene-LU604_RS01905;Dbxref=Genbank:WP_233479755.1;Name=WP_233479755.1;Ontology_term=GO:0072581;gbkey=CDS;gene=epmB;go_process=protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine|0072581||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190754.1;locus_tag=LU604_RS01905;product=EF-P beta-lysylation protein EpmB;protein_id=WP_233479755.1;transl_table=11 NZ_CP089942.1 RefSeq gene 362224 362790 . + . ID=gene-LU604_RS01910;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=LU604_RS01910;old_locus_tag=LU604_01910 NZ_CP089942.1 Protein Homology CDS 362224 362790 . + 0 ID=cds-WP_016190755.1;Parent=gene-LU604_RS01910;Dbxref=Genbank:WP_016190755.1;Name=WP_016190755.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=LU604_RS01910;product=elongation factor P;protein_id=WP_016190755.1;transl_table=11 NZ_CP089942.1 RefSeq gene 362846 362977 . + . ID=gene-LU604_RS01915;Name=LU604_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01915;old_locus_tag=LU604_01915 NZ_CP089942.1 Protein Homology CDS 362846 362977 . + 0 ID=cds-WP_233479756.1;Parent=gene-LU604_RS01915;Dbxref=Genbank:WP_233479756.1;Name=WP_233479756.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095139.1;locus_tag=LU604_RS01915;product=entericidin A/B family lipoprotein;protein_id=WP_233479756.1;transl_table=11 NZ_CP089942.1 RefSeq gene 363082 363216 . + . ID=gene-LU604_RS01920;Name=LU604_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01920;old_locus_tag=LU604_01920 NZ_CP089942.1 Protein Homology CDS 363082 363216 . + 0 ID=cds-WP_233479757.1;Parent=gene-LU604_RS01920;Dbxref=Genbank:WP_233479757.1;Name=WP_233479757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453399.1;locus_tag=LU604_RS01920;product=ECN family pore-forming entericidin;protein_id=WP_233479757.1;transl_table=11 NZ_CP089942.1 RefSeq gene 363529 364053 . - . ID=gene-LU604_RS01925;Name=blc;gbkey=Gene;gene=blc;gene_biotype=protein_coding;locus_tag=LU604_RS01925;old_locus_tag=LU604_01925 NZ_CP089942.1 Protein Homology CDS 363529 364053 . - 0 ID=cds-WP_016190757.1;Parent=gene-LU604_RS01925;Dbxref=Genbank:WP_016190757.1;Name=WP_016190757.1;gbkey=CDS;gene=blc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666851.1;locus_tag=LU604_RS01925;product=outer membrane lipoprotein Blc;protein_id=WP_016190757.1;transl_table=11 NZ_CP089942.1 RefSeq gene 364130 364483 . - . ID=gene-LU604_RS01930;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=LU604_RS01930;old_locus_tag=LU604_01930 NZ_CP089942.1 Protein Homology CDS 364130 364483 . - 0 ID=cds-WP_233479758.1;Parent=gene-LU604_RS01930;Dbxref=Genbank:WP_233479758.1;Name=WP_233479758.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190758.1;locus_tag=LU604_RS01930;product=fumarate reductase subunit FrdD;protein_id=WP_233479758.1;transl_table=11 NZ_CP089942.1 RefSeq gene 364480 364884 . - . ID=gene-LU604_RS01935;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=LU604_RS01935;old_locus_tag=LU604_01935 NZ_CP089942.1 Protein Homology CDS 364480 364884 . - 0 ID=cds-WP_016190759.1;Parent=gene-LU604_RS01935;Dbxref=Genbank:WP_016190759.1;Name=WP_016190759.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200475.1;locus_tag=LU604_RS01935;product=fumarate reductase subunit FrdC;protein_id=WP_016190759.1;transl_table=11 NZ_CP089942.1 RefSeq gene 364896 365630 . - . ID=gene-LU604_RS01940;Name=LU604_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01940;old_locus_tag=LU604_01940 NZ_CP089942.1 Protein Homology CDS 364896 365630 . - 0 ID=cds-WP_016190760.1;Parent=gene-LU604_RS01940;Dbxref=Genbank:WP_016190760.1;Name=WP_016190760.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=LU604_RS01940;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=WP_016190760.1;transl_table=11 NZ_CP089942.1 RefSeq gene 365623 367407 . - . ID=gene-LU604_RS01945;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=LU604_RS01945;old_locus_tag=LU604_01945 NZ_CP089942.1 Protein Homology CDS 365623 367407 . - 0 ID=cds-WP_233479759.1;Parent=gene-LU604_RS01945;Dbxref=Genbank:WP_233479759.1;Name=WP_233479759.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190761.1;locus_tag=LU604_RS01945;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_233479759.1;transl_table=11 NZ_CP089942.1 RefSeq gene 367503 367655 . - . ID=gene-LU604_RS01950;Name=LU604_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01950;old_locus_tag=LU604_01950 NZ_CP089942.1 GeneMarkS-2+ CDS 367503 367655 . - 0 ID=cds-WP_161796985.1;Parent=gene-LU604_RS01950;Dbxref=Genbank:WP_161796985.1;Name=WP_161796985.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS01950;product=hypothetical protein;protein_id=WP_161796985.1;transl_table=11 NZ_CP089942.1 RefSeq gene 367680 368657 . + . ID=gene-LU604_RS01955;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=LU604_RS01955;old_locus_tag=LU604_01955 NZ_CP089942.1 Protein Homology CDS 367680 368657 . + 0 ID=cds-WP_233479760.1;Parent=gene-LU604_RS01955;Dbxref=Genbank:WP_233479760.1;Name=WP_233479760.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666852.1;locus_tag=LU604_RS01955;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_233479760.1;transl_table=11 NZ_CP089942.1 RefSeq gene 368703 372038 . - . ID=gene-LU604_RS01960;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=LU604_RS01960;old_locus_tag=LU604_01960 NZ_CP089942.1 Protein Homology CDS 368703 372038 . - 0 ID=cds-WP_233480725.1;Parent=gene-LU604_RS01960;Dbxref=Genbank:WP_233480725.1;Name=WP_233480725.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160165.1;locus_tag=LU604_RS01960;product=miniconductance mechanosensitive channel MscM;protein_id=WP_233480725.1;transl_table=11 NZ_CP089942.1 RefSeq gene 372049 372948 . - . ID=gene-LU604_RS01965;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=LU604_RS01965;old_locus_tag=LU604_01965 NZ_CP089942.1 Protein Homology CDS 372049 372948 . - 0 ID=cds-WP_016190764.1;Parent=gene-LU604_RS01965;Dbxref=Genbank:WP_016190764.1;Name=WP_016190764.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010615830.1;locus_tag=LU604_RS01965;product=archaetidylserine decarboxylase;protein_id=WP_016190764.1;transl_table=11 NZ_CP089942.1 RefSeq gene 373055 374116 . - . ID=gene-LU604_RS01970;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=LU604_RS01970;old_locus_tag=LU604_01970 NZ_CP089942.1 Protein Homology CDS 373055 374116 . - 0 ID=cds-WP_233479761.1;Parent=gene-LU604_RS01970;Dbxref=Genbank:WP_233479761.1;Name=WP_233479761.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160160.1;locus_tag=LU604_RS01970;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_233479761.1;transl_table=11 NZ_CP089942.1 RefSeq gene 374213 374758 . + . ID=gene-LU604_RS01975;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=LU604_RS01975;old_locus_tag=LU604_01975 NZ_CP089942.1 Protein Homology CDS 374213 374758 . + 0 ID=cds-WP_016190766.1;Parent=gene-LU604_RS01975;Dbxref=Genbank:WP_016190766.1;Name=WP_016190766.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453388.1;locus_tag=LU604_RS01975;product=oligoribonuclease;protein_id=WP_016190766.1;transl_table=11 NZ_CP089942.1 RefSeq gene 374932 375007 . + . ID=gene-LU604_RS01980;Name=LU604_RS01980;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS01980;old_locus_tag=LU604_01980 NZ_CP089942.1 tRNAscan-SE tRNA 374932 375007 . + . ID=rna-LU604_RS01980;Parent=gene-LU604_RS01980;anticodon=(pos:374965..374967);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS01980;product=tRNA-Gly NZ_CP089942.1 tRNAscan-SE exon 374932 375007 . + . ID=exon-LU604_RS01980-1;Parent=rna-LU604_RS01980;anticodon=(pos:374965..374967);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS01980;product=tRNA-Gly NZ_CP089942.1 RefSeq gene 375580 376029 . - . ID=gene-LU604_RS01985;Name=LU604_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01985;old_locus_tag=LU604_01985 NZ_CP089942.1 Protein Homology CDS 375580 376029 . - 0 ID=cds-WP_233479762.1;Parent=gene-LU604_RS01985;Dbxref=Genbank:WP_233479762.1;Name=WP_233479762.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012698.2;locus_tag=LU604_RS01985;product=winged helix-turn-helix domain-containing protein;protein_id=WP_233479762.1;transl_table=11 NZ_CP089942.1 RefSeq gene 376503 377084 . + . ID=gene-LU604_RS01990;Name=LU604_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01990;old_locus_tag=LU604_01990 NZ_CP089942.1 Protein Homology CDS 376503 377084 . + 0 ID=cds-WP_016190768.1;Parent=gene-LU604_RS01990;Dbxref=Genbank:WP_016190768.1;Name=WP_016190768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499738.1;locus_tag=LU604_RS01990;product=fimbrial protein;protein_id=WP_016190768.1;transl_table=11 NZ_CP089942.1 RefSeq gene 377212 377931 . + . ID=gene-LU604_RS01995;Name=LU604_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS01995;old_locus_tag=LU604_01995 NZ_CP089942.1 Protein Homology CDS 377212 377931 . + 0 ID=cds-WP_040465533.1;Parent=gene-LU604_RS01995;Dbxref=Genbank:WP_040465533.1;Name=WP_040465533.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012565.2;locus_tag=LU604_RS01995;product=molecular chaperone;protein_id=WP_040465533.1;transl_table=11 NZ_CP089942.1 RefSeq gene 377945 380515 . + . ID=gene-LU604_RS02000;Name=LU604_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02000;old_locus_tag=LU604_02000 NZ_CP089942.1 Protein Homology CDS 377945 380515 . + 0 ID=cds-WP_233481463.1;Parent=gene-LU604_RS02000;Dbxref=Genbank:WP_233481463.1;Name=WP_233481463.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012786.2;locus_tag=LU604_RS02000;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_233481463.1;transl_table=11 NZ_CP089942.1 RefSeq gene 380598 381500 . + . ID=gene-LU604_RS02005;Name=LU604_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02005;old_locus_tag=LU604_02005 NZ_CP089942.1 Protein Homology CDS 380598 381500 . + 0 ID=cds-WP_233479764.1;Parent=gene-LU604_RS02005;Dbxref=Genbank:WP_233479764.1;Name=WP_233479764.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.2;locus_tag=LU604_RS02005;product=fimbrial protein;protein_id=WP_233479764.1;transl_table=11 NZ_CP089942.1 RefSeq gene 381519 383261 . + . ID=gene-LU604_RS02010;Name=LU604_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02010;old_locus_tag=LU604_02010 NZ_CP089942.1 Protein Homology CDS 381519 383261 . + 0 ID=cds-WP_233479765.1;Parent=gene-LU604_RS02010;Dbxref=Genbank:WP_233479765.1;Name=WP_233479765.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015803.2;locus_tag=LU604_RS02010;product=POTRA domain-containing protein;protein_id=WP_233479765.1;transl_table=11 NZ_CP089942.1 RefSeq gene 383284 392649 . + . ID=gene-LU604_RS02015;Name=LU604_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02015;old_locus_tag=LU604_02015 NZ_CP089942.1 Protein Homology CDS 383284 392649 . + 0 ID=cds-WP_233479766.1;Parent=gene-LU604_RS02015;Dbxref=Genbank:WP_233479766.1;Name=WP_233479766.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024728.2;locus_tag=LU604_RS02015;product=hemagglutinin repeat-containing protein;protein_id=WP_233479766.1;transl_table=11 NZ_CP089942.1 RefSeq gene 393315 393710 . - . ID=gene-LU604_RS02020;Name=LU604_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02020;old_locus_tag=LU604_02020 NZ_CP089942.1 Protein Homology CDS 393315 393710 . - 0 ID=cds-WP_016190775.1;Parent=gene-LU604_RS02020;Dbxref=Genbank:WP_016190775.1;Name=WP_016190775.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017454.2;locus_tag=LU604_RS02020;product=type VI secretion system tube protein Hcp;protein_id=WP_016190775.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 393935 394170 . + . ID=gene-LU604_RS02025;Name=LU604_RS02025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02025;old_locus_tag=LU604_02025;pseudo=true NZ_CP089942.1 Protein Homology CDS 393935 394170 . + 0 ID=cds-LU604_RS02025;Parent=gene-LU604_RS02025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004796.1;locus_tag=LU604_RS02025;product=RAQPRD family integrative conjugative element protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 394242 394458 . + . ID=gene-LU604_RS02030;Name=LU604_RS02030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02030;old_locus_tag=LU604_02030;partial=true;pseudo=true;start_range=.,394242 NZ_CP089942.1 Protein Homology CDS 394242 394458 . + 0 ID=cds-LU604_RS02030;Parent=gene-LU604_RS02030;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=LU604_RS02030;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,394242;transl_table=11 NZ_CP089942.1 RefSeq gene 394462 395370 . - . ID=gene-LU604_RS02035;Name=LU604_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02035;old_locus_tag=LU604_02035 NZ_CP089942.1 Protein Homology CDS 394462 395370 . - 0 ID=cds-WP_233479767.1;Parent=gene-LU604_RS02035;Dbxref=Genbank:WP_233479767.1;Name=WP_233479767.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001744774.1;locus_tag=LU604_RS02035;product=IS110 family transposase;protein_id=WP_233479767.1;transl_table=11 NZ_CP089942.1 RefSeq gene 395824 395899 . + . ID=gene-LU604_RS02040;Name=LU604_RS02040;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS02040;old_locus_tag=LU604_02040 NZ_CP089942.1 tRNAscan-SE tRNA 395824 395899 . + . ID=rna-LU604_RS02040;Parent=gene-LU604_RS02040;anticodon=(pos:395857..395859);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS02040;product=tRNA-Gly NZ_CP089942.1 tRNAscan-SE exon 395824 395899 . + . ID=exon-LU604_RS02040-1;Parent=rna-LU604_RS02040;anticodon=(pos:395857..395859);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS02040;product=tRNA-Gly NZ_CP089942.1 RefSeq gene 396702 396875 . - . ID=gene-LU604_RS02045;Name=LU604_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02045;old_locus_tag=LU604_02045 NZ_CP089942.1 GeneMarkS-2+ CDS 396702 396875 . - 0 ID=cds-WP_233479768.1;Parent=gene-LU604_RS02045;Dbxref=Genbank:WP_233479768.1;Name=WP_233479768.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS02045;product=hypothetical protein;protein_id=WP_233479768.1;transl_table=11 NZ_CP089942.1 RefSeq gene 397083 397271 . + . ID=gene-LU604_RS02050;Name=LU604_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02050;old_locus_tag=LU604_02050 NZ_CP089942.1 GeneMarkS-2+ CDS 397083 397271 . + 0 ID=cds-WP_016190780.1;Parent=gene-LU604_RS02050;Dbxref=Genbank:WP_016190780.1;Name=WP_016190780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS02050;product=hypothetical protein;protein_id=WP_016190780.1;transl_table=11 NZ_CP089942.1 RefSeq gene 397268 398788 . + . ID=gene-LU604_RS02055;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=LU604_RS02055;old_locus_tag=LU604_02055 NZ_CP089942.1 Protein Homology CDS 397268 398788 . + 0 ID=cds-WP_233479769.1;Parent=gene-LU604_RS02055;Dbxref=Genbank:WP_233479769.1;Name=WP_233479769.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190781.1;locus_tag=LU604_RS02055;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_233479769.1;transl_table=11 NZ_CP089942.1 RefSeq gene 398788 399261 . + . ID=gene-LU604_RS02060;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=LU604_RS02060;old_locus_tag=LU604_02060 NZ_CP089942.1 Protein Homology CDS 398788 399261 . + 0 ID=cds-WP_016190782.1;Parent=gene-LU604_RS02060;Dbxref=Genbank:WP_016190782.1;Name=WP_016190782.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200485.1;locus_tag=LU604_RS02060;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_016190782.1;transl_table=11 NZ_CP089942.1 RefSeq gene 399273 400934 . + . ID=gene-LU604_RS02065;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=LU604_RS02065;old_locus_tag=LU604_02065 NZ_CP089942.1 Protein Homology CDS 399273 400934 . + 0 ID=cds-WP_233479770.1;Parent=gene-LU604_RS02065;Dbxref=Genbank:WP_233479770.1;Name=WP_233479770.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190783.1;locus_tag=LU604_RS02065;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_233479770.1;transl_table=11 NZ_CP089942.1 RefSeq gene 401005 402897 . + . ID=gene-LU604_RS02070;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=LU604_RS02070;old_locus_tag=LU604_02070 NZ_CP089942.1 Protein Homology CDS 401005 402897 . + 0 ID=cds-WP_233479771.1;Parent=gene-LU604_RS02070;Dbxref=Genbank:WP_233479771.1;Name=WP_233479771.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170945.1;locus_tag=LU604_RS02070;product=DNA mismatch repair endonuclease MutL;protein_id=WP_233479771.1;transl_table=11 NZ_CP089942.1 RefSeq gene 402890 403840 . + . ID=gene-LU604_RS02075;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=LU604_RS02075;old_locus_tag=LU604_02075 NZ_CP089942.1 Protein Homology CDS 402890 403840 . + 0 ID=cds-WP_016190785.1;Parent=gene-LU604_RS02075;Dbxref=Genbank:WP_016190785.1;Name=WP_016190785.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200488.1;locus_tag=LU604_RS02075;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_016190785.1;transl_table=11 NZ_CP089942.1 RefSeq gene 403942 404253 . + . ID=gene-LU604_RS02080;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=LU604_RS02080;old_locus_tag=LU604_02080 NZ_CP089942.1 Protein Homology CDS 403942 404253 . + 0 ID=cds-WP_016190786.1;Parent=gene-LU604_RS02080;Dbxref=Genbank:WP_016190786.1;Name=WP_016190786.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224716.1;locus_tag=LU604_RS02080;product=RNA chaperone Hfq;protein_id=WP_016190786.1;transl_table=11 NZ_CP089942.1 RefSeq gene 404452 405732 . + . ID=gene-LU604_RS02085;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=LU604_RS02085;old_locus_tag=LU604_02085 NZ_CP089942.1 Protein Homology CDS 404452 405732 . + 0 ID=cds-WP_233479772.1;Parent=gene-LU604_RS02085;Dbxref=Genbank:WP_233479772.1;Name=WP_233479772.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434123.1;locus_tag=LU604_RS02085;product=GTPase HflX;protein_id=WP_233479772.1;transl_table=11 NZ_CP089942.1 RefSeq gene 405800 407041 . + . ID=gene-LU604_RS02090;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=LU604_RS02090;old_locus_tag=LU604_02090 NZ_CP089942.1 Protein Homology CDS 405800 407041 . + 0 ID=cds-WP_016190788.1;Parent=gene-LU604_RS02090;Dbxref=Genbank:WP_016190788.1;Name=WP_016190788.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666867.1;locus_tag=LU604_RS02090;product=FtsH protease activity modulator HflK;protein_id=WP_016190788.1;transl_table=11 NZ_CP089942.1 RefSeq gene 407045 408055 . + . ID=gene-LU604_RS02095;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=LU604_RS02095;old_locus_tag=LU604_02095 NZ_CP089942.1 Protein Homology CDS 407045 408055 . + 0 ID=cds-WP_016190789.1;Parent=gene-LU604_RS02095;Dbxref=Genbank:WP_016190789.1;Name=WP_016190789.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016517617.1;locus_tag=LU604_RS02095;product=protease modulator HflC;protein_id=WP_016190789.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 408537 408872 . - . ID=gene-LU604_RS02100;Name=LU604_RS02100;end_range=408872,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02100;old_locus_tag=LU604_02100;partial=true;pseudo=true;start_range=.,408537 NZ_CP089942.1 Protein Homology CDS 408537 408872 . - 0 ID=cds-LU604_RS02100;Parent=gene-LU604_RS02100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=408872,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343747.1;locus_tag=LU604_RS02100;partial=true;product=transposase;pseudo=true;start_range=.,408537;transl_table=11 NZ_CP089942.1 RefSeq gene 409019 409432 . - . ID=gene-LU604_RS02105;Name=LU604_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02105;old_locus_tag=LU604_02105 NZ_CP089942.1 GeneMarkS-2+ CDS 409019 409432 . - 0 ID=cds-WP_016190791.1;Parent=gene-LU604_RS02105;Dbxref=Genbank:WP_016190791.1;Name=WP_016190791.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS02105;product=hypothetical protein;protein_id=WP_016190791.1;transl_table=11 NZ_CP089942.1 RefSeq gene 409745 410485 . + . ID=gene-LU604_RS02110;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=LU604_RS02110;old_locus_tag=LU604_02110 NZ_CP089942.1 Protein Homology CDS 409745 410485 . + 0 ID=cds-WP_016190792.1;Parent=gene-LU604_RS02110;Dbxref=Genbank:WP_016190792.1;Name=WP_016190792.1;Ontology_term=GO:0046855,GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001825828.1;locus_tag=LU604_RS02110;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_016190792.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 410527 411109 . - . ID=gene-LU604_RS02115;Name=LU604_RS02115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02115;old_locus_tag=LU604_02115;pseudo=true NZ_CP089942.1 Protein Homology CDS 410527 411109 . - 0 ID=cds-LU604_RS02115;Parent=gene-LU604_RS02115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003830421.1;locus_tag=LU604_RS02115;product=YtfJ family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 411413 411619 . + . ID=gene-LU604_RS02120;Name=LU604_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02120;old_locus_tag=LU604_02120 NZ_CP089942.1 Protein Homology CDS 411413 411619 . + 0 ID=cds-WP_016190795.1;Parent=gene-LU604_RS02120;Dbxref=Genbank:WP_016190795.1;Name=WP_016190795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160093.1;locus_tag=LU604_RS02120;product=DUF1107 domain-containing protein;protein_id=WP_016190795.1;transl_table=11 NZ_CP089942.1 RefSeq gene 411741 413072 . - . ID=gene-LU604_RS02125;Name=LU604_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02125;old_locus_tag=LU604_02125 NZ_CP089942.1 Protein Homology CDS 411741 413072 . - 0 ID=cds-WP_016190796.1;Parent=gene-LU604_RS02125;Dbxref=Genbank:WP_016190796.1;Name=WP_016190796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013027381.1;locus_tag=LU604_RS02125;product=hemolysin family protein;protein_id=WP_016190796.1;transl_table=11 NZ_CP089942.1 RefSeq gene 413592 415316 . + . ID=gene-LU604_RS02130;Name=LU604_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02130;old_locus_tag=LU604_02130 NZ_CP089942.1 Protein Homology CDS 413592 415316 . + 0 ID=cds-WP_233479773.1;Parent=gene-LU604_RS02130;Dbxref=Genbank:WP_233479773.1;Name=WP_233479773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190797.1;locus_tag=LU604_RS02130;product=autotransporter assembly complex protein TamA;protein_id=WP_233479773.1;transl_table=11 NZ_CP089942.1 RefSeq gene 415313 419080 . + . ID=gene-LU604_RS02135;Name=LU604_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02135;old_locus_tag=LU604_02135 NZ_CP089942.1 Protein Homology CDS 415313 419080 . + 0 ID=cds-WP_233479774.1;Parent=gene-LU604_RS02135;Dbxref=Genbank:WP_233479774.1;Name=WP_233479774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060815.1;locus_tag=LU604_RS02135;product=translocation/assembly module TamB domain-containing protein;protein_id=WP_233479774.1;transl_table=11 NZ_CP089942.1 RefSeq gene 419083 419436 . + . ID=gene-LU604_RS02140;Name=LU604_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02140;old_locus_tag=LU604_02140 NZ_CP089942.1 Protein Homology CDS 419083 419436 . + 0 ID=cds-WP_016190799.1;Parent=gene-LU604_RS02140;Dbxref=Genbank:WP_016190799.1;Name=WP_016190799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013027378.1;locus_tag=LU604_RS02140;product=gamma-glutamylcyclotransferase;protein_id=WP_016190799.1;transl_table=11 NZ_CP089942.1 RefSeq gene 419741 420271 . - . ID=gene-LU604_RS02145;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=LU604_RS02145;old_locus_tag=LU604_02145 NZ_CP089942.1 Protein Homology CDS 419741 420271 . - 0 ID=cds-WP_016190800.1;Parent=gene-LU604_RS02145;Dbxref=Genbank:WP_016190800.1;Name=WP_016190800.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463275.1;locus_tag=LU604_RS02145;product=inorganic diphosphatase;protein_id=WP_016190800.1;transl_table=11 NZ_CP089942.1 RefSeq gene 420740 422302 . + . ID=gene-LU604_RS02150;Name=LU604_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02150;old_locus_tag=LU604_02150 NZ_CP089942.1 Protein Homology CDS 420740 422302 . + 0 ID=cds-WP_233479775.1;Parent=gene-LU604_RS02150;Dbxref=Genbank:WP_233479775.1;Name=WP_233479775.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190801.1;locus_tag=LU604_RS02150;product=methyl-accepting chemotaxis protein;protein_id=WP_233479775.1;transl_table=11 NZ_CP089942.1 RefSeq gene 422403 423401 . - . ID=gene-LU604_RS02155;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=LU604_RS02155;old_locus_tag=LU604_02155 NZ_CP089942.1 Protein Homology CDS 422403 423401 . - 0 ID=cds-WP_016190802.1;Parent=gene-LU604_RS02155;Dbxref=Genbank:WP_016190802.1;Name=WP_016190802.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=LU604_RS02155;product=class 1 fructose-bisphosphatase;protein_id=WP_016190802.1;transl_table=11 NZ_CP089942.1 RefSeq gene 423570 424949 . + . ID=gene-LU604_RS02160;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=LU604_RS02160;old_locus_tag=LU604_02160 NZ_CP089942.1 Protein Homology CDS 423570 424949 . + 0 ID=cds-WP_016190803.1;Parent=gene-LU604_RS02160;Dbxref=Genbank:WP_016190803.1;Name=WP_016190803.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160084.1;locus_tag=LU604_RS02160;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_016190803.1;transl_table=11 NZ_CP089942.1 RefSeq gene 425011 425550 . - . ID=gene-LU604_RS02165;Name=LU604_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02165;old_locus_tag=LU604_02165 NZ_CP089942.1 Protein Homology CDS 425011 425550 . - 0 ID=cds-WP_016190804.1;Parent=gene-LU604_RS02165;Dbxref=Genbank:WP_016190804.1;Name=WP_016190804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166270.1;locus_tag=LU604_RS02165;product=ribosome-associated protein;protein_id=WP_016190804.1;transl_table=11 NZ_CP089942.1 RefSeq gene 425717 427057 . + . ID=gene-LU604_RS02170;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=LU604_RS02170;old_locus_tag=LU604_02170 NZ_CP089942.1 Protein Homology CDS 425717 427057 . + 0 ID=cds-WP_016190805.1;Parent=gene-LU604_RS02170;Dbxref=Genbank:WP_016190805.1;Name=WP_016190805.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224775.1;locus_tag=LU604_RS02170;product=metalloprotease PmbA;protein_id=WP_016190805.1;transl_table=11 NZ_CP089942.1 RefSeq gene 427147 427530 . + . ID=gene-LU604_RS02175;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=LU604_RS02175;old_locus_tag=LU604_02175 NZ_CP089942.1 Protein Homology CDS 427147 427530 . + 0 ID=cds-WP_016190806.1;Parent=gene-LU604_RS02175;Dbxref=Genbank:WP_016190806.1;Name=WP_016190806.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003855527.1;locus_tag=LU604_RS02175;product=cytochrome b562;protein_id=WP_016190806.1;transl_table=11 NZ_CP089942.1 RefSeq gene 427713 427907 . + . ID=gene-LU604_RS02180;Name=LU604_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02180;old_locus_tag=LU604_02180 NZ_CP089942.1 GeneMarkS-2+ CDS 427713 427907 . + 0 ID=cds-WP_233479776.1;Parent=gene-LU604_RS02180;Dbxref=Genbank:WP_233479776.1;Name=WP_233479776.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS02180;product=hypothetical protein;protein_id=WP_233479776.1;transl_table=11 NZ_CP089942.1 RefSeq gene 428168 428551 . + . ID=gene-LU604_RS02185;Name=LU604_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02185;old_locus_tag=LU604_02185 NZ_CP089942.1 Protein Homology CDS 428168 428551 . + 0 ID=cds-WP_016190808.1;Parent=gene-LU604_RS02185;Dbxref=Genbank:WP_016190808.1;Name=WP_016190808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009087405.1;locus_tag=LU604_RS02185;product=hypothetical protein;protein_id=WP_016190808.1;transl_table=11 NZ_CP089942.1 RefSeq gene 428574 428936 . + . ID=gene-LU604_RS02190;Name=LU604_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02190;old_locus_tag=LU604_02190 NZ_CP089942.1 Protein Homology CDS 428574 428936 . + 0 ID=cds-WP_016190809.1;Parent=gene-LU604_RS02190;Dbxref=Genbank:WP_016190809.1;Name=WP_016190809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=LU604_RS02190;product=SFCGS family glycine-rich protein;protein_id=WP_016190809.1;transl_table=11 NZ_CP089942.1 RefSeq gene 428940 429233 . + . ID=gene-LU604_RS02195;Name=LU604_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02195;old_locus_tag=LU604_02195 NZ_CP089942.1 Protein Homology CDS 428940 429233 . + 0 ID=cds-WP_016190810.1;Parent=gene-LU604_RS02195;Dbxref=Genbank:WP_016190810.1;Name=WP_016190810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015368575.1;locus_tag=LU604_RS02195;product=DUF4312 family protein;protein_id=WP_016190810.1;transl_table=11 NZ_CP089942.1 RefSeq gene 429306 430082 . + . ID=gene-LU604_RS02200;Name=LU604_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02200;old_locus_tag=LU604_02200 NZ_CP089942.1 Protein Homology CDS 429306 430082 . + 0 ID=cds-WP_016190811.1;Parent=gene-LU604_RS02200;Dbxref=Genbank:WP_016190811.1;Name=WP_016190811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224781.1;locus_tag=LU604_RS02200;product=DUF4311 domain-containing protein;protein_id=WP_016190811.1;transl_table=11 NZ_CP089942.1 RefSeq gene 430096 430740 . + . ID=gene-LU604_RS02205;Name=LU604_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02205;old_locus_tag=LU604_02205 NZ_CP089942.1 Protein Homology CDS 430096 430740 . + 0 ID=cds-WP_016190812.1;Parent=gene-LU604_RS02205;Dbxref=Genbank:WP_016190812.1;Name=WP_016190812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160075.1;locus_tag=LU604_RS02205;product=DUF4310 family protein;protein_id=WP_016190812.1;transl_table=11 NZ_CP089942.1 RefSeq gene 430818 431954 . + . ID=gene-LU604_RS02210;Name=LU604_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02210;old_locus_tag=LU604_02210 NZ_CP089942.1 Protein Homology CDS 430818 431954 . + 0 ID=cds-WP_233479777.1;Parent=gene-LU604_RS02210;Dbxref=Genbank:WP_233479777.1;Name=WP_233479777.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542356.1;locus_tag=LU604_RS02210;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_233479777.1;transl_table=11 NZ_CP089942.1 RefSeq gene 431938 433059 . + . ID=gene-LU604_RS02215;Name=LU604_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02215;old_locus_tag=LU604_02215 NZ_CP089942.1 Protein Homology CDS 431938 433059 . + 0 ID=cds-WP_016190814.1;Parent=gene-LU604_RS02215;Dbxref=Genbank:WP_016190814.1;Name=WP_016190814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170910.1;locus_tag=LU604_RS02215;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_016190814.1;transl_table=11 NZ_CP089942.1 RefSeq gene 433056 433796 . + . ID=gene-LU604_RS02220;Name=LU604_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02220;old_locus_tag=LU604_02220 NZ_CP089942.1 Protein Homology CDS 433056 433796 . + 0 ID=cds-WP_233479778.1;Parent=gene-LU604_RS02220;Dbxref=Genbank:WP_233479778.1;Name=WP_233479778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441727.1;locus_tag=LU604_RS02220;product=KDGP aldolase family protein;protein_id=WP_233479778.1;transl_table=11 NZ_CP089942.1 RefSeq gene 433861 435006 . + . ID=gene-LU604_RS02225;Name=LU604_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02225;old_locus_tag=LU604_02225 NZ_CP089942.1 Protein Homology CDS 433861 435006 . + 0 ID=cds-WP_233479779.1;Parent=gene-LU604_RS02225;Dbxref=Genbank:WP_233479779.1;Name=WP_233479779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105935.1;locus_tag=LU604_RS02225;product=lactonase family protein;protein_id=WP_233479779.1;transl_table=11 NZ_CP089942.1 RefSeq gene 435155 437065 . + . ID=gene-LU604_RS02230;Name=LU604_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02230;old_locus_tag=LU604_02230 NZ_CP089942.1 Protein Homology CDS 435155 437065 . + 0 ID=cds-WP_233479780.1;Parent=gene-LU604_RS02230;Dbxref=Genbank:WP_233479780.1;Name=WP_233479780.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019104891.1;locus_tag=LU604_RS02230;product=PRD domain-containing protein;protein_id=WP_233479780.1;transl_table=11 NZ_CP089942.1 RefSeq gene 437151 437723 . - . ID=gene-LU604_RS02235;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=LU604_RS02235;old_locus_tag=LU604_02235 NZ_CP089942.1 Protein Homology CDS 437151 437723 . - 0 ID=cds-WP_016190818.1;Parent=gene-LU604_RS02235;Dbxref=Genbank:WP_016190818.1;Name=WP_016190818.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666905.1;locus_tag=LU604_RS02235;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_016190818.1;transl_table=11 NZ_CP089942.1 RefSeq gene 437734 438324 . - . ID=gene-LU604_RS02240;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=LU604_RS02240;old_locus_tag=LU604_02240 NZ_CP089942.1 Protein Homology CDS 437734 438324 . - 0 ID=cds-WP_233479781.1;Parent=gene-LU604_RS02240;Dbxref=Genbank:WP_233479781.1;Name=WP_233479781.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001483830.1;locus_tag=LU604_RS02240;product=DnaA initiator-associating protein DiaA;protein_id=WP_233479781.1;transl_table=11 NZ_CP089942.1 RefSeq gene 438357 438749 . - . ID=gene-LU604_RS02245;Name=LU604_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02245;old_locus_tag=LU604_02245 NZ_CP089942.1 Protein Homology CDS 438357 438749 . - 0 ID=cds-WP_233479782.1;Parent=gene-LU604_RS02245;Dbxref=Genbank:WP_233479782.1;Name=WP_233479782.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160066.1;locus_tag=LU604_RS02245;product=YraN family protein;protein_id=WP_233479782.1;transl_table=11 NZ_CP089942.1 RefSeq gene 438707 440755 . - . ID=gene-LU604_RS02250;Name=LU604_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02250;old_locus_tag=LU604_02250 NZ_CP089942.1 Protein Homology CDS 438707 440755 . - 0 ID=cds-WP_233479783.1;Parent=gene-LU604_RS02250;Dbxref=Genbank:WP_233479783.1;Name=WP_233479783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000249104.1;locus_tag=LU604_RS02250;product=penicillin-binding protein activator;protein_id=WP_233479783.1;transl_table=11 NZ_CP089942.1 RefSeq gene 440818 441675 . + . ID=gene-LU604_RS02255;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=LU604_RS02255;old_locus_tag=LU604_02255 NZ_CP089942.1 Protein Homology CDS 440818 441675 . + 0 ID=cds-WP_016190822.1;Parent=gene-LU604_RS02255;Dbxref=Genbank:WP_016190822.1;Name=WP_016190822.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200535.1;locus_tag=LU604_RS02255;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_016190822.1;transl_table=11 NZ_CP089942.1 RefSeq gene 441708 442087 . + . ID=gene-LU604_RS02260;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=LU604_RS02260;old_locus_tag=LU604_02260 NZ_CP089942.1 cmsearch RNase_P_RNA 441708 442087 . + . ID=rna-LU604_RS02260;Parent=gene-LU604_RS02260;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS02260;product=RNase P RNA component class A NZ_CP089942.1 cmsearch exon 441708 442087 . + . ID=exon-LU604_RS02260-1;Parent=rna-LU604_RS02260;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS02260;product=RNase P RNA component class A NZ_CP089942.1 RefSeq gene 442928 443233 . + . ID=gene-LU604_RS02265;Name=LU604_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02265;old_locus_tag=LU604_02265 NZ_CP089942.1 GeneMarkS-2+ CDS 442928 443233 . + 0 ID=cds-WP_233479784.1;Parent=gene-LU604_RS02265;Dbxref=Genbank:WP_233479784.1;Name=WP_233479784.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS02265;product=hypothetical protein;protein_id=WP_233479784.1;transl_table=11 NZ_CP089942.1 RefSeq gene 443366 443785 . + . ID=gene-LU604_RS02270;Name=LU604_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02270;old_locus_tag=LU604_02270 NZ_CP089942.1 GeneMarkS-2+ CDS 443366 443785 . + 0 ID=cds-WP_233479785.1;Parent=gene-LU604_RS02270;Dbxref=Genbank:WP_233479785.1;Name=WP_233479785.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS02270;product=hypothetical protein;protein_id=WP_233479785.1;transl_table=11 NZ_CP089942.1 RefSeq gene 444245 445453 . + . ID=gene-LU604_RS02275;Name=LU604_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02275;old_locus_tag=LU604_02275 NZ_CP089942.1 Protein Homology CDS 444245 445453 . + 0 ID=cds-WP_233479786.1;Parent=gene-LU604_RS02275;Dbxref=Genbank:WP_233479786.1;Name=WP_233479786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224772.1;locus_tag=LU604_RS02275;product=aldose 1-epimerase family protein;protein_id=WP_233479786.1;transl_table=11 NZ_CP089942.1 RefSeq gene 445976 446551 . + . ID=gene-LU604_RS02280;Name=LU604_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02280;old_locus_tag=LU604_02280 NZ_CP089942.1 Protein Homology CDS 445976 446551 . + 0 ID=cds-WP_016190826.1;Parent=gene-LU604_RS02280;Dbxref=Genbank:WP_016190826.1;Name=WP_016190826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799342.1;locus_tag=LU604_RS02280;product=UPF0149 family protein;protein_id=WP_016190826.1;transl_table=11 NZ_CP089942.1 RefSeq gene 446635 447339 . - . ID=gene-LU604_RS02285;Name=LU604_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02285;old_locus_tag=LU604_02285 NZ_CP089942.1 Protein Homology CDS 446635 447339 . - 0 ID=cds-WP_233479787.1;Parent=gene-LU604_RS02285;Dbxref=Genbank:WP_233479787.1;Name=WP_233479787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633543.1;locus_tag=LU604_RS02285;product=pirin family protein;protein_id=WP_233479787.1;transl_table=11 NZ_CP089942.1 RefSeq gene 447463 448365 . + . ID=gene-LU604_RS02290;Name=LU604_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02290;old_locus_tag=LU604_02290 NZ_CP089942.1 Protein Homology CDS 447463 448365 . + 0 ID=cds-WP_016190828.1;Parent=gene-LU604_RS02290;Dbxref=Genbank:WP_016190828.1;Name=WP_016190828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001041009.1;locus_tag=LU604_RS02290;product=LysR family transcriptional regulator;protein_id=WP_016190828.1;transl_table=11 NZ_CP089942.1 RefSeq gene 449178 449471 . + . ID=gene-LU604_RS02295;Name=LU604_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02295;old_locus_tag=LU604_02295 NZ_CP089942.1 Protein Homology CDS 449178 449471 . + 0 ID=cds-WP_016190829.1;Parent=gene-LU604_RS02295;Dbxref=Genbank:WP_016190829.1;Name=WP_016190829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453441.1;locus_tag=LU604_RS02295;product=hypothetical protein;protein_id=WP_016190829.1;transl_table=11 NZ_CP089942.1 RefSeq gene 449779 450171 . - . ID=gene-LU604_RS02300;Name=LU604_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02300;old_locus_tag=LU604_02300 NZ_CP089942.1 Protein Homology CDS 449779 450171 . - 0 ID=cds-WP_016190830.1;Parent=gene-LU604_RS02300;Dbxref=Genbank:WP_016190830.1;Name=WP_016190830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=LU604_RS02300;product=DoxX family protein;protein_id=WP_016190830.1;transl_table=11 NZ_CP089942.1 RefSeq gene 450402 450683 . - . ID=gene-LU604_RS02305;Name=LU604_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02305;old_locus_tag=LU604_02305 NZ_CP089942.1 Protein Homology CDS 450402 450683 . - 0 ID=cds-WP_233479788.1;Parent=gene-LU604_RS02305;Dbxref=Genbank:WP_233479788.1;Name=WP_233479788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442611.1;locus_tag=LU604_RS02305;product=YqjK-like family protein;protein_id=WP_233479788.1;transl_table=11 NZ_CP089942.1 RefSeq gene 450683 451075 . - . ID=gene-LU604_RS02310;Name=LU604_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02310;old_locus_tag=LU604_02310 NZ_CP089942.1 Protein Homology CDS 450683 451075 . - 0 ID=cds-WP_016190832.1;Parent=gene-LU604_RS02310;Dbxref=Genbank:WP_016190832.1;Name=WP_016190832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542344.1;locus_tag=LU604_RS02310;product=phage holin family protein;protein_id=WP_016190832.1;transl_table=11 NZ_CP089942.1 RefSeq gene 451078 451383 . - . ID=gene-LU604_RS02315;Name=LU604_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02315;old_locus_tag=LU604_02315 NZ_CP089942.1 Protein Homology CDS 451078 451383 . - 0 ID=cds-WP_016190833.1;Parent=gene-LU604_RS02315;Dbxref=Genbank:WP_016190833.1;Name=WP_016190833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709853.1;locus_tag=LU604_RS02315;product=YqjD family protein;protein_id=WP_016190833.1;transl_table=11 NZ_CP089942.1 RefSeq gene 451419 451793 . - . ID=gene-LU604_RS02320;Name=LU604_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02320;old_locus_tag=LU604_02320 NZ_CP089942.1 Protein Homology CDS 451419 451793 . - 0 ID=cds-WP_016190834.1;Parent=gene-LU604_RS02320;Dbxref=Genbank:WP_016190834.1;Name=WP_016190834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013027330.1;locus_tag=LU604_RS02320;product=DUF1090 domain-containing protein;protein_id=WP_016190834.1;transl_table=11 NZ_CP089942.1 RefSeq gene 451959 452387 . - . ID=gene-LU604_RS02325;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=LU604_RS02325;old_locus_tag=LU604_02325 NZ_CP089942.1 Protein Homology CDS 451959 452387 . - 0 ID=cds-WP_040465537.1;Parent=gene-LU604_RS02325;Dbxref=Genbank:WP_040465537.1;Name=WP_040465537.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015961955.1;locus_tag=LU604_RS02325;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_040465537.1;transl_table=11 NZ_CP089942.1 RefSeq gene 452357 453019 . - . ID=gene-LU604_RS02330;Name=LU604_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02330;old_locus_tag=LU604_02330 NZ_CP089942.1 Protein Homology CDS 452357 453019 . - 0 ID=cds-WP_016190836.1;Parent=gene-LU604_RS02330;Dbxref=Genbank:WP_016190836.1;Name=WP_016190836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015699452.1;locus_tag=LU604_RS02330;product=DedA family protein;protein_id=WP_016190836.1;transl_table=11 NZ_CP089942.1 RefSeq gene 453685 454920 . - . ID=gene-LU604_RS02335;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=LU604_RS02335;old_locus_tag=LU604_02335 NZ_CP089942.1 Protein Homology CDS 453685 454920 . - 0 ID=cds-WP_016190838.1;Parent=gene-LU604_RS02335;Dbxref=Genbank:WP_016190838.1;Name=WP_016190838.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200550.1;locus_tag=LU604_RS02335;product=serine/threonine transporter SstT;protein_id=WP_016190838.1;transl_table=11 NZ_CP089942.1 RefSeq gene 455105 456076 . - . ID=gene-LU604_RS02340;Name=LU604_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02340;old_locus_tag=LU604_02340 NZ_CP089942.1 Protein Homology CDS 455105 456076 . - 0 ID=cds-WP_016190839.1;Parent=gene-LU604_RS02340;Dbxref=Genbank:WP_016190839.1;Name=WP_016190839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017801349.1;locus_tag=LU604_RS02340;product=TerC family protein;protein_id=WP_016190839.1;transl_table=11 NZ_CP089942.1 RefSeq gene 456170 456424 . - . ID=gene-LU604_RS02345;Name=LU604_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02345;old_locus_tag=LU604_02345 NZ_CP089942.1 GeneMarkS-2+ CDS 456170 456424 . - 0 ID=cds-WP_233481652.1;Parent=gene-LU604_RS02345;Dbxref=Genbank:WP_233481652.1;Name=WP_233481652.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS02345;product=hypothetical protein;protein_id=WP_233481652.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 456317 457104 . - . ID=gene-LU604_RS02350;Name=LU604_RS02350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02350;old_locus_tag=LU604_02350;partial=true;pseudo=true;start_range=.,456317 NZ_CP089942.1 Protein Homology CDS 456317 457104 . - 0 ID=cds-LU604_RS02350;Parent=gene-LU604_RS02350;Note=programmed frameshift%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611700.1;locus_tag=LU604_RS02350;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,456317;transl_table=11 NZ_CP089942.1 RefSeq gene 457284 457790 . - . ID=gene-LU604_RS02355;Name=LU604_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02355;old_locus_tag=LU604_02355 NZ_CP089942.1 Protein Homology CDS 457284 457790 . - 0 ID=cds-WP_233481464.1;Parent=gene-LU604_RS02355;Dbxref=Genbank:WP_233481464.1;Name=WP_233481464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190842.1;locus_tag=LU604_RS02355;product=M48 family metallopeptidase;protein_id=WP_233481464.1;transl_table=11 NZ_CP089942.1 RefSeq gene 457799 457966 . - . ID=gene-LU604_RS02360;Name=LU604_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02360;old_locus_tag=LU604_02360 NZ_CP089942.1 GeneMarkS-2+ CDS 457799 457966 . - 0 ID=cds-WP_233479789.1;Parent=gene-LU604_RS02360;Dbxref=Genbank:WP_233479789.1;Name=WP_233479789.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS02360;product=hypothetical protein;protein_id=WP_233479789.1;transl_table=11 NZ_CP089942.1 RefSeq gene 458063 459190 . + . ID=gene-LU604_RS02365;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=LU604_RS02365;old_locus_tag=LU604_02365 NZ_CP089942.1 Protein Homology CDS 458063 459190 . + 0 ID=cds-WP_233479790.1;Parent=gene-LU604_RS02365;Dbxref=Genbank:WP_233479790.1;Name=WP_233479790.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118296.1;locus_tag=LU604_RS02365;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_233479790.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 459220 460311 . - . ID=gene-LU604_RS02370;Name=LU604_RS02370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02370;old_locus_tag=LU604_02370;partial=true;pseudo=true;start_range=.,459220 NZ_CP089942.1 Protein Homology CDS 459220 460311 . - 0 ID=cds-LU604_RS02370;Parent=gene-LU604_RS02370;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015835711.1;locus_tag=LU604_RS02370;partial=true;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;pseudo=true;start_range=.,459220;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 460554 461351 . - . ID=gene-LU604_RS02375;Name=LU604_RS02375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02375;old_locus_tag=LU604_02375;pseudo=true NZ_CP089942.1 Protein Homology CDS 460554 461351 . - 0 ID=cds-LU604_RS02375;Parent=gene-LU604_RS02375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807118.1;locus_tag=LU604_RS02375;product=TIM barrel protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 461677 463182 . + . ID=gene-LU604_RS02380;Name=LU604_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02380;old_locus_tag=LU604_02380 NZ_CP089942.1 Protein Homology CDS 461677 463182 . + 0 ID=cds-WP_016190849.1;Parent=gene-LU604_RS02380;Dbxref=Genbank:WP_016190849.1;Name=WP_016190849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224823.1;locus_tag=LU604_RS02380;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_016190849.1;transl_table=11 NZ_CP089942.1 RefSeq gene 463201 464010 . + . ID=gene-LU604_RS02385;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=LU604_RS02385;old_locus_tag=LU604_02385 NZ_CP089942.1 Protein Homology CDS 463201 464010 . + 0 ID=cds-WP_016190850.1;Parent=gene-LU604_RS02385;Dbxref=Genbank:WP_016190850.1;Name=WP_016190850.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224824.1;locus_tag=LU604_RS02385;product=5-deoxy-glucuronate isomerase;protein_id=WP_016190850.1;transl_table=11 NZ_CP089942.1 RefSeq gene 464094 464948 . - . ID=gene-LU604_RS02390;Name=LU604_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02390;old_locus_tag=LU604_02390 NZ_CP089942.1 Protein Homology CDS 464094 464948 . - 0 ID=cds-WP_233479791.1;Parent=gene-LU604_RS02390;Dbxref=Genbank:WP_233479791.1;Name=WP_233479791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190851.1;locus_tag=LU604_RS02390;product=MurR/RpiR family transcriptional regulator;protein_id=WP_233479791.1;transl_table=11 NZ_CP089942.1 RefSeq gene 465099 467012 . - . ID=gene-LU604_RS02395;Name=iolC;gbkey=Gene;gene=iolC;gene_biotype=protein_coding;locus_tag=LU604_RS02395;old_locus_tag=LU604_02395 NZ_CP089942.1 Protein Homology CDS 465099 467012 . - 0 ID=cds-WP_233480726.1;Parent=gene-LU604_RS02395;Dbxref=Genbank:WP_233480726.1;Name=WP_233480726.1;Ontology_term=GO:0019310,GO:0047590;gbkey=CDS;gene=iolC;go_function=5-dehydro-2-deoxygluconokinase activity|0047590||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224826.1;locus_tag=LU604_RS02395;product=5-dehydro-2-deoxygluconokinase;protein_id=WP_233480726.1;transl_table=11 NZ_CP089942.1 RefSeq gene 467541 469481 . + . ID=gene-LU604_RS02400;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=LU604_RS02400;old_locus_tag=LU604_02400 NZ_CP089942.1 Protein Homology CDS 467541 469481 . + 0 ID=cds-WP_233480727.1;Parent=gene-LU604_RS02400;Dbxref=Genbank:WP_233480727.1;Name=WP_233480727.1;Ontology_term=GO:0019310,GO:0000287,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=magnesium ion binding|0000287||IEA,hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224828.1;locus_tag=LU604_RS02400;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_233480727.1;transl_table=11 NZ_CP089942.1 RefSeq gene 469525 470538 . + . ID=gene-LU604_RS02405;Name=LU604_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02405;old_locus_tag=LU604_02405 NZ_CP089942.1 Protein Homology CDS 469525 470538 . + 0 ID=cds-WP_233481465.1;Parent=gene-LU604_RS02405;Dbxref=Genbank:WP_233481465.1;Name=WP_233481465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224829.1;locus_tag=LU604_RS02405;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_233481465.1;transl_table=11 NZ_CP089942.1 RefSeq gene 470576 471484 . + . ID=gene-LU604_RS02410;Name=LU604_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02410;old_locus_tag=LU604_02410 NZ_CP089942.1 Protein Homology CDS 470576 471484 . + 0 ID=cds-WP_233479792.1;Parent=gene-LU604_RS02410;Dbxref=Genbank:WP_233479792.1;Name=WP_233479792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190855.1;locus_tag=LU604_RS02410;product=sugar phosphate isomerase/epimerase;protein_id=WP_233479792.1;transl_table=11 NZ_CP089942.1 RefSeq gene 471484 472383 . + . ID=gene-LU604_RS02415;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=LU604_RS02415;old_locus_tag=LU604_02415 NZ_CP089942.1 Protein Homology CDS 471484 472383 . + 0 ID=cds-WP_016190856.1;Parent=gene-LU604_RS02415;Dbxref=Genbank:WP_016190856.1;Name=WP_016190856.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224831.1;locus_tag=LU604_RS02415;product=myo-inosose-2 dehydratase;protein_id=WP_016190856.1;transl_table=11 NZ_CP089942.1 RefSeq gene 472783 474285 . + . ID=gene-LU604_RS02420;Name=LU604_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02420;old_locus_tag=LU604_02420 NZ_CP089942.1 Protein Homology CDS 472783 474285 . + 0 ID=cds-WP_233479793.1;Parent=gene-LU604_RS02420;Dbxref=Genbank:WP_233479793.1;Name=WP_233479793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190857.1;locus_tag=LU604_RS02420;product=sugar porter family MFS transporter;protein_id=WP_233479793.1;transl_table=11 NZ_CP089942.1 RefSeq gene 475343 475969 . + . ID=gene-LU604_RS02425;Name=LU604_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02425;old_locus_tag=LU604_02425 NZ_CP089942.1 Protein Homology CDS 475343 475969 . + 0 ID=cds-WP_233479794.1;Parent=gene-LU604_RS02425;Dbxref=Genbank:WP_233479794.1;Name=WP_233479794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190858.1;locus_tag=LU604_RS02425;product=carbonic anhydrase;protein_id=WP_233479794.1;transl_table=11 NZ_CP089942.1 RefSeq gene 475966 477450 . + . ID=gene-LU604_RS02430;Name=LU604_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02430;old_locus_tag=LU604_02430 NZ_CP089942.1 Protein Homology CDS 475966 477450 . + 0 ID=cds-WP_233479795.1;Parent=gene-LU604_RS02430;Dbxref=Genbank:WP_233479795.1;Name=WP_233479795.1;Ontology_term=GO:0008272,GO:0015116,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190859.1;locus_tag=LU604_RS02430;product=SulP family inorganic anion transporter;protein_id=WP_233479795.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 477751 478811 . + . ID=gene-LU604_RS02435;Name=LU604_RS02435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02435;old_locus_tag=LU604_02435;pseudo=true NZ_CP089942.1 Protein Homology CDS 477751 478811 . + 0 ID=cds-LU604_RS02435;Parent=gene-LU604_RS02435;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015697192.1;locus_tag=LU604_RS02435;product=AI-2E family transporter;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 478843 480051 . - . ID=gene-LU604_RS02440;Name=LU604_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02440;old_locus_tag=LU604_02440 NZ_CP089942.1 Protein Homology CDS 478843 480051 . - 0 ID=cds-WP_233479796.1;Parent=gene-LU604_RS02440;Dbxref=Genbank:WP_233479796.1;Name=WP_233479796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190860.1;locus_tag=LU604_RS02440;product=FAD-dependent oxidoreductase;protein_id=WP_233479796.1;transl_table=11 NZ_CP089942.1 RefSeq gene 481359 483011 . + . ID=gene-LU604_RS02445;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=LU604_RS02445;old_locus_tag=LU604_02445 NZ_CP089942.1 Protein Homology CDS 481359 483011 . + 0 ID=cds-WP_233479797.1;Parent=gene-LU604_RS02445;Dbxref=Genbank:WP_233479797.1;Name=WP_233479797.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190861.1;locus_tag=LU604_RS02445;product=malate dehydrogenase (quinone);protein_id=WP_233479797.1;transl_table=11 NZ_CP089942.1 RefSeq gene 483068 484276 . - . ID=gene-LU604_RS02450;Name=LU604_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02450;old_locus_tag=LU604_02450 NZ_CP089942.1 Protein Homology CDS 483068 484276 . - 0 ID=cds-WP_233481466.1;Parent=gene-LU604_RS02450;Dbxref=Genbank:WP_233481466.1;Name=WP_233481466.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS02450;product=IS256 family transposase;protein_id=WP_233481466.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 484347 484925 . - . ID=gene-LU604_RS02455;Name=LU604_RS02455;end_range=484925,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02455;old_locus_tag=LU604_02455;partial=true;pseudo=true;start_range=.,484347 NZ_CP089942.1 Protein Homology CDS 484347 484925 . - 0 ID=cds-LU604_RS02455;Parent=gene-LU604_RS02455;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=484925,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016065981.1;locus_tag=LU604_RS02455;partial=true;product=terminase family protein;pseudo=true;start_range=.,484347;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 485091 485376 . + . ID=gene-LU604_RS02460;Name=LU604_RS02460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02460;old_locus_tag=LU604_02460;partial=true;pseudo=true;start_range=.,485091 NZ_CP089942.1 Protein Homology CDS 485091 485376 . + 0 ID=cds-LU604_RS02460;Parent=gene-LU604_RS02460;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=LU604_RS02460;partial=true;product=ISNCY family transposase;pseudo=true;start_range=.,485091;transl_table=11 NZ_CP089942.1 RefSeq gene 485631 486650 . + . ID=gene-LU604_RS02465;Name=LU604_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02465;old_locus_tag=LU604_02465 NZ_CP089942.1 Protein Homology CDS 485631 486650 . + 0 ID=cds-WP_233479799.1;Parent=gene-LU604_RS02465;Dbxref=Genbank:WP_233479799.1;Name=WP_233479799.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024772.2;locus_tag=LU604_RS02465;product=ABC transporter substrate-binding protein;protein_id=WP_233479799.1;transl_table=11 NZ_CP089942.1 RefSeq gene 486643 487455 . + . ID=gene-LU604_RS02470;Name=LU604_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02470;old_locus_tag=LU604_02470 NZ_CP089942.1 Protein Homology CDS 486643 487455 . + 0 ID=cds-WP_233479800.1;Parent=gene-LU604_RS02470;Dbxref=Genbank:WP_233479800.1;Name=WP_233479800.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LU604_RS02470;product=ABC transporter ATP-binding protein;protein_id=WP_233479800.1;transl_table=11 NZ_CP089942.1 RefSeq gene 487448 488284 . + . ID=gene-LU604_RS02475;Name=LU604_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02475;old_locus_tag=LU604_02475 NZ_CP089942.1 Protein Homology CDS 487448 488284 . + 0 ID=cds-WP_016190863.1;Parent=gene-LU604_RS02475;Dbxref=Genbank:WP_016190863.1;Name=WP_016190863.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012738.2;locus_tag=LU604_RS02475;product=ABC transporter permease;protein_id=WP_016190863.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 488341 488445 . - . ID=gene-LU604_RS02480;Name=LU604_RS02480;end_range=488445,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02480;old_locus_tag=LU604_02480;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 488341 488445 . - 0 ID=cds-LU604_RS02480;Parent=gene-LU604_RS02480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=488445,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=LU604_RS02480;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 488499 488841 . + . ID=gene-LU604_RS02485;Name=LU604_RS02485;end_range=488841,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02485;old_locus_tag=LU604_02485;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 488499 488841 . + 0 ID=cds-LU604_RS02485;Parent=gene-LU604_RS02485;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=488841,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=LU604_RS02485;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 488823 489365 . + . ID=gene-LU604_RS02490;Name=LU604_RS02490;end_range=489365,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02490;old_locus_tag=LU604_02490;partial=true;pseudo=true;start_range=.,488823 NZ_CP089942.1 Protein Homology CDS 488823 489365 . + 0 ID=cds-LU604_RS02490;Parent=gene-LU604_RS02490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=489365,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011920327.1;locus_tag=LU604_RS02490;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,488823;transl_table=11 NZ_CP089942.1 RefSeq gene 489642 490850 . - . ID=gene-LU604_RS02495;Name=LU604_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02495;old_locus_tag=LU604_02495 NZ_CP089942.1 Protein Homology CDS 489642 490850 . - 0 ID=cds-WP_233479801.1;Parent=gene-LU604_RS02495;Dbxref=Genbank:WP_233479801.1;Name=WP_233479801.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS02495;product=IS256 family transposase;protein_id=WP_233479801.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 490992 491242 . - . ID=gene-LU604_RS02500;Name=LU604_RS02500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02500;old_locus_tag=LU604_02500;pseudo=true NZ_CP089942.1 Protein Homology CDS 490992 491242 . - 0 ID=cds-LU604_RS02500;Parent=gene-LU604_RS02500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001217543.1;locus_tag=LU604_RS02500;product=DinI-like family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 491465 493054 . + . ID=gene-LU604_RS02505;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=LU604_RS02505;old_locus_tag=LU604_02505 NZ_CP089942.1 Protein Homology CDS 491465 493054 . + 0 ID=cds-WP_016190867.1;Parent=gene-LU604_RS02505;Dbxref=Genbank:WP_016190867.1;Name=WP_016190867.1;Ontology_term=GO:0006415,GO:0003747,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170782.1;locus_tag=LU604_RS02505;product=peptide chain release factor 3;protein_id=WP_016190867.1;transl_table=11 NZ_CP089942.1 RefSeq gene 493226 493663 . + . ID=gene-LU604_RS02510;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS02510;old_locus_tag=LU604_02510 NZ_CP089942.1 Protein Homology CDS 493226 493663 . + 0 ID=cds-WP_233479802.1;Parent=gene-LU604_RS02510;Dbxref=Genbank:WP_233479802.1;Name=WP_233479802.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU604_RS02510;product=IS200/IS605 family transposase;protein_id=WP_233479802.1;transl_table=11 NZ_CP089942.1 RefSeq gene 493970 494584 . + . ID=gene-LU604_RS02515;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=LU604_RS02515;old_locus_tag=LU604_02515 NZ_CP089942.1 Protein Homology CDS 493970 494584 . + 0 ID=cds-WP_016190869.1;Parent=gene-LU604_RS02515;Dbxref=Genbank:WP_016190869.1;Name=WP_016190869.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009087205.1;locus_tag=LU604_RS02515;product=molecular chaperone OsmY;protein_id=WP_016190869.1;transl_table=11 NZ_CP089942.1 RefSeq gene 494725 494886 . + . ID=gene-LU604_RS02520;Name=LU604_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02520;old_locus_tag=LU604_02520 NZ_CP089942.1 Protein Homology CDS 494725 494886 . + 0 ID=cds-WP_016190870.1;Parent=gene-LU604_RS02520;Dbxref=Genbank:WP_016190870.1;Name=WP_016190870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191683.1;locus_tag=LU604_RS02520;product=DUF1328 domain-containing protein;protein_id=WP_016190870.1;transl_table=11 NZ_CP089942.1 RefSeq gene 494983 496191 . + . ID=gene-LU604_RS02525;Name=LU604_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02525;old_locus_tag=LU604_02525 NZ_CP089942.1 Protein Homology CDS 494983 496191 . + 0 ID=cds-WP_233479803.1;Parent=gene-LU604_RS02525;Dbxref=Genbank:WP_233479803.1;Name=WP_233479803.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU604_RS02525;product=IS256 family transposase;protein_id=WP_233479803.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 496437 497059 . - . ID=gene-LU604_RS02530;Name=LU604_RS02530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02530;old_locus_tag=LU604_02530;pseudo=true NZ_CP089942.1 Protein Homology CDS 496437 497059 . - 0 ID=cds-LU604_RS02530;Parent=gene-LU604_RS02530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=LU604_RS02530;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 497245 498207 . + . ID=gene-LU604_RS02535;Name=LU604_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02535;old_locus_tag=LU604_02535 NZ_CP089942.1 Protein Homology CDS 497245 498207 . + 0 ID=cds-WP_233479804.1;Parent=gene-LU604_RS02535;Dbxref=Genbank:WP_233479804.1;Name=WP_233479804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848541.1;locus_tag=LU604_RS02535;product=DUF6363 domain-containing protein;protein_id=WP_233479804.1;transl_table=11 NZ_CP089942.1 RefSeq gene 498204 498980 . + . ID=gene-LU604_RS02540;Name=LU604_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02540;old_locus_tag=LU604_02540 NZ_CP089942.1 Protein Homology CDS 498204 498980 . + 0 ID=cds-WP_233479805.1;Parent=gene-LU604_RS02540;Dbxref=Genbank:WP_233479805.1;Name=WP_233479805.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667018.1;locus_tag=LU604_RS02540;product=TatD family hydrolase;protein_id=WP_233479805.1;transl_table=11 NZ_CP089942.1 RefSeq gene 499255 500034 . + . ID=gene-LU604_RS02545;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=LU604_RS02545;old_locus_tag=LU604_02545 NZ_CP089942.1 Protein Homology CDS 499255 500034 . + 0 ID=cds-WP_016190875.1;Parent=gene-LU604_RS02545;Dbxref=Genbank:WP_016190875.1;Name=WP_016190875.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170779.1;locus_tag=LU604_RS02545;product=deoxyribose-phosphate aldolase;protein_id=WP_016190875.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 500050 500892 . + . ID=gene-LU604_RS02550;Name=LU604_RS02550;end_range=500892,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02550;old_locus_tag=LU604_02550;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 500050 500892 . + 0 ID=cds-LU604_RS02550;Parent=gene-LU604_RS02550;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=500892,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667020.1;locus_tag=LU604_RS02550;partial=true;product=thymidine phosphorylase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 500972 502195 . + . ID=gene-LU604_RS02555;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=LU604_RS02555;old_locus_tag=LU604_02555 NZ_CP089942.1 Protein Homology CDS 500972 502195 . + 0 ID=cds-WP_016190878.1;Parent=gene-LU604_RS02555;Dbxref=Genbank:WP_016190878.1;Name=WP_016190878.1;Ontology_term=GO:0006139,GO:0008973;gbkey=CDS;gene=deoB;go_function=phosphopentomutase activity|0008973||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014605068.1;locus_tag=LU604_RS02555;product=phosphopentomutase;protein_id=WP_016190878.1;transl_table=11 NZ_CP089942.1 RefSeq gene 502235 502954 . + . ID=gene-LU604_RS02560;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=LU604_RS02560;old_locus_tag=LU604_02560 NZ_CP089942.1 Protein Homology CDS 502235 502954 . + 0 ID=cds-WP_016190879.1;Parent=gene-LU604_RS02560;Dbxref=Genbank:WP_016190879.1;Name=WP_016190879.1;Ontology_term=GO:0043096,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=purine nucleobase salvage|0043096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209217.1;locus_tag=LU604_RS02560;product=purine-nucleoside phosphorylase;protein_id=WP_016190879.1;transl_table=11 NZ_CP089942.1 RefSeq gene 503142 503839 . + . ID=gene-LU604_RS02565;Name=LU604_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02565;old_locus_tag=LU604_02565 NZ_CP089942.1 Protein Homology CDS 503142 503391 . + 0 ID=cds-WP_233479807.1;Parent=gene-LU604_RS02565;Dbxref=Genbank:WP_233479807.1;Name=WP_233479807.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS02565;product=IS1 family transposase;protein_id=WP_233479807.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 503391 503839 . + 2 ID=cds-WP_233479807.1;Parent=gene-LU604_RS02565;Dbxref=Genbank:WP_233479807.1;Name=WP_233479807.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS02565;product=IS1 family transposase;protein_id=WP_233479807.1;transl_table=11 NZ_CP089942.1 RefSeq gene 504359 505021 . - . ID=gene-LU604_RS02570;Name=LU604_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02570;old_locus_tag=LU604_02570 NZ_CP089942.1 Protein Homology CDS 504359 505021 . - 0 ID=cds-WP_016190881.1;Parent=gene-LU604_RS02570;Dbxref=Genbank:WP_016190881.1;Name=WP_016190881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170773.1;locus_tag=LU604_RS02570;product=YtjB family periplasmic protein;protein_id=WP_016190881.1;transl_table=11 NZ_CP089942.1 RefSeq gene 505145 506122 . + . ID=gene-LU604_RS02575;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=LU604_RS02575;old_locus_tag=LU604_02575 NZ_CP089942.1 Protein Homology CDS 505145 506122 . + 0 ID=cds-WP_016190882.1;Parent=gene-LU604_RS02575;Dbxref=Genbank:WP_016190882.1;Name=WP_016190882.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008925531.1;locus_tag=LU604_RS02575;product=phosphoserine phosphatase;protein_id=WP_016190882.1;transl_table=11 NZ_CP089942.1 RefSeq gene 506137 507519 . + . ID=gene-LU604_RS02580;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=LU604_RS02580;old_locus_tag=LU604_02580 NZ_CP089942.1 Protein Homology CDS 506137 507519 . + 0 ID=cds-WP_016190883.1;Parent=gene-LU604_RS02580;Dbxref=Genbank:WP_016190883.1;Name=WP_016190883.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=LU604_RS02580;product=DNA repair protein RadA;protein_id=WP_016190883.1;transl_table=11 NZ_CP089942.1 RefSeq gene 507625 508851 . + . ID=gene-LU604_RS02585;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=LU604_RS02585;old_locus_tag=LU604_02585 NZ_CP089942.1 Protein Homology CDS 507625 508851 . + 0 ID=cds-WP_016190884.1;Parent=gene-LU604_RS02585;Dbxref=Genbank:WP_016190884.1;Name=WP_016190884.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542243.1;locus_tag=LU604_RS02585;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_016190884.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 508875 509276 . - . ID=gene-LU604_RS02590;Name=LU604_RS02590;end_range=509276,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02590;old_locus_tag=LU604_02590;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 508875 509276 . - 0 ID=cds-LU604_RS02590;Parent=gene-LU604_RS02590;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=509276,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440425.1;locus_tag=LU604_RS02590;partial=true;product=zinc-binding dehydrogenase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 509594 511261 . - . ID=gene-LU604_RS02595;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=LU604_RS02595;old_locus_tag=LU604_02595 NZ_CP089942.1 Protein Homology CDS 509594 511261 . - 0 ID=cds-WP_016190886.1;Parent=gene-LU604_RS02595;Dbxref=Genbank:WP_016190886.1;Name=WP_016190886.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313376.1;locus_tag=LU604_RS02595;product=energy-dependent translational throttle protein EttA;protein_id=WP_016190886.1;transl_table=11 NZ_CP089942.1 RefSeq gene 511953 512042 . - . ID=gene-LU604_RS26880;Name=LU604_RS26880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26880 NZ_CP089942.1 Protein Homology CDS 511953 512042 . - 0 ID=cds-WP_252120246.1;Parent=gene-LU604_RS26880;Dbxref=Genbank:WP_252120246.1;Name=WP_252120246.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012892.2;locus_tag=LU604_RS26880;product=hypothetical protein;protein_id=WP_252120246.1;transl_table=11 NZ_CP089942.1 RefSeq gene 512101 512403 . - . ID=gene-LU604_RS02600;Name=LU604_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02600;old_locus_tag=LU604_02600 NZ_CP089942.1 Protein Homology CDS 512101 512403 . - 0 ID=cds-WP_267938755.1;Parent=gene-LU604_RS02600;Dbxref=Genbank:WP_267938755.1;Name=WP_267938755.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012892.2;locus_tag=LU604_RS02600;product=cation transporting ATPase C-terminal domain-containing protein;protein_id=WP_267938755.1;transl_table=11 NZ_CP089942.1 RefSeq gene 512904 514829 . + . ID=gene-LU604_RS02605;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=LU604_RS02605;old_locus_tag=LU604_02605 NZ_CP089942.1 Protein Homology CDS 512904 514829 . + 0 ID=cds-WP_233479808.1;Parent=gene-LU604_RS02605;Dbxref=Genbank:WP_233479808.1;Name=WP_233479808.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170759.1;locus_tag=LU604_RS02605;product=murein transglycosylase;protein_id=WP_233479808.1;transl_table=11 NZ_CP089942.1 RefSeq gene 514883 515212 . + . ID=gene-LU604_RS02610;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=LU604_RS02610;old_locus_tag=LU604_02610 NZ_CP089942.1 Protein Homology CDS 514883 515212 . + 0 ID=cds-WP_016190891.1;Parent=gene-LU604_RS02610;Dbxref=Genbank:WP_016190891.1;Name=WP_016190891.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800563.1;locus_tag=LU604_RS02610;product=trp operon repressor;protein_id=WP_016190891.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 515198 515730 . - . ID=gene-LU604_RS02615;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=pseudogene;locus_tag=LU604_RS02615;old_locus_tag=LU604_02615;pseudo=true NZ_CP089942.1 Protein Homology CDS 515198 515730 . - 0 ID=cds-LU604_RS02615;Parent=gene-LU604_RS02615;Note=frameshifted;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800562.1;locus_tag=LU604_RS02615;product=inosine/xanthosine triphosphatase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 515782 516429 . + . ID=gene-LU604_RS02620;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=LU604_RS02620;old_locus_tag=LU604_02620 NZ_CP089942.1 Protein Homology CDS 515782 516429 . + 0 ID=cds-WP_016190892.1;Parent=gene-LU604_RS02620;Dbxref=Genbank:WP_016190892.1;Name=WP_016190892.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016534799.1;locus_tag=LU604_RS02620;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_016190892.1;transl_table=11 NZ_CP089942.1 RefSeq gene 516499 517389 . - . ID=gene-LU604_RS02625;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=LU604_RS02625;old_locus_tag=LU604_02625 NZ_CP089942.1 Protein Homology CDS 516499 517389 . - 0 ID=cds-WP_016190893.1;Parent=gene-LU604_RS02625;Dbxref=Genbank:WP_016190893.1;Name=WP_016190893.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200692.1;locus_tag=LU604_RS02625;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_016190893.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 517580 518054 . + . ID=gene-LU604_RS02630;Name=creA;gbkey=Gene;gene=creA;gene_biotype=pseudogene;locus_tag=LU604_RS02630;old_locus_tag=LU604_02630;pseudo=true NZ_CP089942.1 Protein Homology CDS 517580 518054 . + 0 ID=cds-LU604_RS02630;Parent=gene-LU604_RS02630;Note=frameshifted;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159792.1;locus_tag=LU604_RS02630;product=protein CreA;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 518103 518819 . - . ID=gene-LU604_RS02635;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=LU604_RS02635;old_locus_tag=LU604_02635 NZ_CP089942.1 Protein Homology CDS 518103 518819 . - 0 ID=cds-WP_233479809.1;Parent=gene-LU604_RS02635;Dbxref=Genbank:WP_233479809.1;Name=WP_233479809.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225009.1;locus_tag=LU604_RS02635;product=two-component system response regulator ArcA;protein_id=WP_233479809.1;transl_table=11 NZ_CP089942.1 cmsearch sequence_feature 519937 520055 . + . ID=id-NZ_CP089942.1:519937..520055;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP089942.1 RefSeq gene 520080 522542 . + . ID=gene-LU604_RS02640;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=LU604_RS02640;old_locus_tag=LU604_02640 NZ_CP089942.1 Protein Homology CDS 520080 522542 . + 0 ID=cds-WP_233479810.1;Parent=gene-LU604_RS02640;Dbxref=Genbank:WP_233479810.1;Name=WP_233479810.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=LU604_RS02640;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_233479810.1;transl_table=11 NZ_CP089942.1 RefSeq gene 522545 523474 . + . ID=gene-LU604_RS02645;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=LU604_RS02645;old_locus_tag=LU604_02645 NZ_CP089942.1 Protein Homology CDS 522545 523474 . + 0 ID=cds-WP_016190898.1;Parent=gene-LU604_RS02645;Dbxref=Genbank:WP_016190898.1;Name=WP_016190898.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159786.1;locus_tag=LU604_RS02645;product=homoserine kinase;protein_id=WP_016190898.1;transl_table=11 NZ_CP089942.1 RefSeq gene 523478 524764 . + . ID=gene-LU604_RS02650;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=LU604_RS02650;old_locus_tag=LU604_02650 NZ_CP089942.1 Protein Homology CDS 523478 524764 . + 0 ID=cds-WP_233479811.1;Parent=gene-LU604_RS02650;Dbxref=Genbank:WP_233479811.1;Name=WP_233479811.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667045.1;locus_tag=LU604_RS02650;product=threonine synthase;protein_id=WP_233479811.1;transl_table=11 NZ_CP089942.1 RefSeq gene 524802 525578 . - . ID=gene-LU604_RS02655;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=LU604_RS02655;old_locus_tag=LU604_02655 NZ_CP089942.1 Protein Homology CDS 524802 525578 . - 0 ID=cds-WP_233479812.1;Parent=gene-LU604_RS02655;Dbxref=Genbank:WP_233479812.1;Name=WP_233479812.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008108674.1;locus_tag=LU604_RS02655;product=peroxide stress protein YaaA;protein_id=WP_233479812.1;transl_table=11 NZ_CP089942.1 RefSeq gene 525817 526770 . + . ID=gene-LU604_RS02660;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=LU604_RS02660;old_locus_tag=LU604_02660 NZ_CP089942.1 Protein Homology CDS 525817 526770 . + 0 ID=cds-WP_016190901.1;Parent=gene-LU604_RS02660;Dbxref=Genbank:WP_016190901.1;Name=WP_016190901.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308035.1;locus_tag=LU604_RS02660;product=transaldolase;protein_id=WP_016190901.1;transl_table=11 NZ_CP089942.1 RefSeq gene 526882 527466 . + . ID=gene-LU604_RS02665;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=LU604_RS02665;old_locus_tag=LU604_02665 NZ_CP089942.1 Protein Homology CDS 526882 527466 . + 0 ID=cds-WP_233479813.1;Parent=gene-LU604_RS02665;Dbxref=Genbank:WP_233479813.1;Name=WP_233479813.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190902.1;locus_tag=LU604_RS02665;product=molybdopterin adenylyltransferase;protein_id=WP_233479813.1;transl_table=11 NZ_CP089942.1 RefSeq gene 527693 529012 . + . ID=gene-LU604_RS02670;Name=LU604_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02670;old_locus_tag=LU604_02670 NZ_CP089942.1 Protein Homology CDS 527693 529012 . + 0 ID=cds-WP_233480728.1;Parent=gene-LU604_RS02670;Dbxref=Genbank:WP_233480728.1;Name=WP_233480728.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190903.1;locus_tag=LU604_RS02670;product=MFS transporter;protein_id=WP_233480728.1;transl_table=11 NZ_CP089942.1 RefSeq gene 529092 529789 . + . ID=gene-LU604_RS02675;Name=LU604_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02675;old_locus_tag=LU604_02675 NZ_CP089942.1 Protein Homology CDS 529092 529353 . + 0 ID=cds-WP_233479814.1;Parent=gene-LU604_RS02675;Dbxref=Genbank:WP_233479814.1;Name=WP_233479814.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU604_RS02675;product=IS1 family transposase;protein_id=WP_233479814.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 529353 529789 . + 2 ID=cds-WP_233479814.1;Parent=gene-LU604_RS02675;Dbxref=Genbank:WP_233479814.1;Name=WP_233479814.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU604_RS02675;product=IS1 family transposase;protein_id=WP_233479814.1;transl_table=11 NZ_CP089942.1 RefSeq gene 530198 530767 . - . ID=gene-LU604_RS02680;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=LU604_RS02680;old_locus_tag=LU604_02680 NZ_CP089942.1 Protein Homology CDS 530198 530767 . - 0 ID=cds-WP_233479815.1;Parent=gene-LU604_RS02680;Dbxref=Genbank:WP_233479815.1;Name=WP_233479815.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190906.1;locus_tag=LU604_RS02680;product=acetate uptake transporter;protein_id=WP_233479815.1;transl_table=11 NZ_CP089942.1 RefSeq gene 531070 532983 . + . ID=gene-LU604_RS02685;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=LU604_RS02685;old_locus_tag=LU604_02685 NZ_CP089942.1 Protein Homology CDS 531070 532983 . + 0 ID=cds-WP_233479816.1;Parent=gene-LU604_RS02685;Dbxref=Genbank:WP_233479816.1;Name=WP_233479816.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667051.1;locus_tag=LU604_RS02685;product=molecular chaperone DnaK;protein_id=WP_233479816.1;transl_table=11 NZ_CP089942.1 RefSeq gene 533090 534223 . + . ID=gene-LU604_RS02690;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=LU604_RS02690;old_locus_tag=LU604_02690 NZ_CP089942.1 Protein Homology CDS 533090 534223 . + 0 ID=cds-WP_016190908.1;Parent=gene-LU604_RS02690;Dbxref=Genbank:WP_016190908.1;Name=WP_016190908.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308042.1;locus_tag=LU604_RS02690;product=molecular chaperone DnaJ;protein_id=WP_016190908.1;transl_table=11 NZ_CP089942.1 RefSeq gene 534700 535860 . + . ID=gene-LU604_RS02695;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=LU604_RS02695;old_locus_tag=LU604_02695 NZ_CP089942.1 Protein Homology CDS 534700 535860 . + 0 ID=cds-WP_016190909.1;Parent=gene-LU604_RS02695;Dbxref=Genbank:WP_016190909.1;Name=WP_016190909.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159770.1;locus_tag=LU604_RS02695;product=Na+/H+ antiporter NhaA;protein_id=WP_016190909.1;transl_table=11 NZ_CP089942.1 RefSeq gene 536127 536390 . - . ID=gene-LU604_RS02700;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=LU604_RS02700;old_locus_tag=LU604_02700 NZ_CP089942.1 Protein Homology CDS 536127 536390 . - 0 ID=cds-WP_016190910.1;Parent=gene-LU604_RS02700;Dbxref=Genbank:WP_016190910.1;Name=WP_016190910.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=LU604_RS02700;product=30S ribosomal protein S20;protein_id=WP_016190910.1;transl_table=11 NZ_CP089942.1 RefSeq gene 536705 537643 . + . ID=gene-LU604_RS02705;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=LU604_RS02705;old_locus_tag=LU604_02705 NZ_CP089942.1 Protein Homology CDS 536705 537643 . + 0 ID=cds-WP_016190911.1;Parent=gene-LU604_RS02705;Dbxref=Genbank:WP_016190911.1;Name=WP_016190911.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159767.1;locus_tag=LU604_RS02705;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_016190911.1;transl_table=11 NZ_CP089942.1 RefSeq gene 537674 540490 . + . ID=gene-LU604_RS02710;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=LU604_RS02710;old_locus_tag=LU604_02710 NZ_CP089942.1 Protein Homology CDS 537674 540490 . + 0 ID=cds-WP_233479817.1;Parent=gene-LU604_RS02710;Dbxref=Genbank:WP_233479817.1;Name=WP_233479817.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=LU604_RS02710;product=isoleucine--tRNA ligase;protein_id=WP_233479817.1;transl_table=11 NZ_CP089942.1 RefSeq gene 540491 540985 . + . ID=gene-LU604_RS02715;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=LU604_RS02715;old_locus_tag=LU604_02715 NZ_CP089942.1 Protein Homology CDS 540491 540985 . + 0 ID=cds-WP_016190913.1;Parent=gene-LU604_RS02715;Dbxref=Genbank:WP_016190913.1;Name=WP_016190913.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542214.1;locus_tag=LU604_RS02715;product=signal peptidase II;protein_id=WP_016190913.1;transl_table=11 NZ_CP089942.1 RefSeq gene 540995 541465 . + . ID=gene-LU604_RS02720;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=LU604_RS02720;old_locus_tag=LU604_02720 NZ_CP089942.1 Protein Homology CDS 540995 541465 . + 0 ID=cds-WP_016190914.1;Parent=gene-LU604_RS02720;Dbxref=Genbank:WP_016190914.1;Name=WP_016190914.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170742.1;locus_tag=LU604_RS02720;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_016190914.1;transl_table=11 NZ_CP089942.1 RefSeq gene 541446 542399 . + . ID=gene-LU604_RS02725;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=LU604_RS02725;old_locus_tag=LU604_02725 NZ_CP089942.1 Protein Homology CDS 541446 542399 . + 0 ID=cds-WP_016190915.1;Parent=gene-LU604_RS02725;Dbxref=Genbank:WP_016190915.1;Name=WP_016190915.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010253724.1;locus_tag=LU604_RS02725;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_016190915.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 542480 543305 . - . ID=gene-LU604_RS02730;Name=LU604_RS02730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02730;old_locus_tag=LU604_02730;pseudo=true NZ_CP089942.1 Protein Homology CDS 542480 543305 . - 0 ID=cds-LU604_RS02730;Parent=gene-LU604_RS02730;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS02730;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 543366 543828 . + . ID=gene-LU604_RS02735;Name=LU604_RS02735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02735;old_locus_tag=LU604_02735;partial=true;pseudo=true;start_range=.,543366 NZ_CP089942.1 Protein Homology CDS 543366 543828 . + 0 ID=cds-LU604_RS02735;Parent=gene-LU604_RS02735;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU604_RS02735;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,543366;transl_table=11 NZ_CP089942.1 RefSeq gene 544008 544829 . - . ID=gene-LU604_RS02740;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=LU604_RS02740;old_locus_tag=LU604_02740 NZ_CP089942.1 Protein Homology CDS 544008 544829 . - 0 ID=cds-WP_233479818.1;Parent=gene-LU604_RS02740;Dbxref=Genbank:WP_233479818.1;Name=WP_233479818.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159747.1;locus_tag=LU604_RS02740;product=co-chaperone DjlA;protein_id=WP_233479818.1;transl_table=11 NZ_CP089942.1 RefSeq gene 545104 547506 . + . ID=gene-LU604_RS02745;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=LU604_RS02745;old_locus_tag=LU604_02745 NZ_CP089942.1 Protein Homology CDS 545104 547506 . + 0 ID=cds-WP_233479819.1;Parent=gene-LU604_RS02745;Dbxref=Genbank:WP_233479819.1;Name=WP_233479819.1;Ontology_term=GO:0010033,GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=response to organic substance|0010033||IEA,lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542203.1;locus_tag=LU604_RS02745;product=LPS assembly protein LptD;protein_id=WP_233479819.1;transl_table=11 NZ_CP089942.1 RefSeq gene 547561 548856 . + . ID=gene-LU604_RS02750;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=LU604_RS02750;old_locus_tag=LU604_02750 NZ_CP089942.1 Protein Homology CDS 547561 548856 . + 0 ID=cds-WP_233479820.1;Parent=gene-LU604_RS02750;Dbxref=Genbank:WP_233479820.1;Name=WP_233479820.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667069.1;locus_tag=LU604_RS02750;product=peptidylprolyl isomerase SurA;protein_id=WP_233479820.1;transl_table=11 NZ_CP089942.1 RefSeq gene 548846 549829 . + . ID=gene-LU604_RS02755;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=LU604_RS02755;old_locus_tag=LU604_02755 NZ_CP089942.1 Protein Homology CDS 548846 549829 . + 0 ID=cds-WP_233480729.1;Parent=gene-LU604_RS02755;Dbxref=Genbank:WP_233480729.1;Name=WP_233480729.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190921.1;locus_tag=LU604_RS02755;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_233480729.1;transl_table=11 NZ_CP089942.1 RefSeq gene 549829 550659 . + . ID=gene-LU604_RS02760;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=LU604_RS02760;old_locus_tag=LU604_02760 NZ_CP089942.1 Protein Homology CDS 549829 550659 . + 0 ID=cds-WP_016190922.1;Parent=gene-LU604_RS02760;Dbxref=Genbank:WP_016190922.1;Name=WP_016190922.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440472.1;locus_tag=LU604_RS02760;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_016190922.1;transl_table=11 NZ_CP089942.1 RefSeq gene 550661 551038 . + . ID=gene-LU604_RS02765;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=LU604_RS02765;old_locus_tag=LU604_02765 NZ_CP089942.1 Protein Homology CDS 550661 551038 . + 0 ID=cds-WP_233479821.1;Parent=gene-LU604_RS02765;Dbxref=Genbank:WP_233479821.1;Name=WP_233479821.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225059.1;locus_tag=LU604_RS02765;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_233479821.1;transl_table=11 NZ_CP089942.1 RefSeq gene 551083 551913 . + . ID=gene-LU604_RS02770;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=LU604_RS02770;old_locus_tag=LU604_02770 NZ_CP089942.1 Protein Homology CDS 551083 551913 . + 0 ID=cds-WP_233479822.1;Parent=gene-LU604_RS02770;Dbxref=Genbank:WP_233479822.1;Name=WP_233479822.1;Ontology_term=GO:0006139,GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190924.1;locus_tag=LU604_RS02770;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_233479822.1;transl_table=11 NZ_CP089942.1 RefSeq gene 552283 552762 . - . ID=gene-LU604_RS02775;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=LU604_RS02775;old_locus_tag=LU604_02775 NZ_CP089942.1 Protein Homology CDS 552283 552762 . - 0 ID=cds-WP_016190925.1;Parent=gene-LU604_RS02775;Dbxref=Genbank:WP_016190925.1;Name=WP_016190925.1;Ontology_term=GO:0046654;gbkey=CDS;gene=folA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667064.1;locus_tag=LU604_RS02775;product=type 3 dihydrofolate reductase;protein_id=WP_016190925.1;transl_table=11 NZ_CP089942.1 RefSeq gene 553334 556558 . - . ID=gene-LU604_RS02780;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=LU604_RS02780;old_locus_tag=LU604_02780 NZ_CP089942.1 Protein Homology CDS 553334 556558 . - 0 ID=cds-WP_233479823.1;Parent=gene-LU604_RS02780;Dbxref=Genbank:WP_233479823.1;Name=WP_233479823.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019843352.1;locus_tag=LU604_RS02780;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_233479823.1;transl_table=11 NZ_CP089942.1 RefSeq gene 556573 557718 . - . ID=gene-LU604_RS02785;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=LU604_RS02785;old_locus_tag=LU604_02785 NZ_CP089942.1 Protein Homology CDS 556573 557718 . - 0 ID=cds-WP_233479824.1;Parent=gene-LU604_RS02785;Dbxref=Genbank:WP_233479824.1;Name=WP_233479824.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=LU604_RS02785;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_233479824.1;transl_table=11 NZ_CP089942.1 RefSeq gene 558164 558985 . - . ID=gene-LU604_RS02790;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=LU604_RS02790;old_locus_tag=LU604_02790 NZ_CP089942.1 Protein Homology CDS 558164 558985 . - 0 ID=cds-WP_016190929.1;Parent=gene-LU604_RS02790;Dbxref=Genbank:WP_016190929.1;Name=WP_016190929.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159760.1;locus_tag=LU604_RS02790;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_016190929.1;transl_table=11 NZ_CP089942.1 RefSeq gene 559647 560891 . - . ID=gene-LU604_RS02795;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=LU604_RS02795;old_locus_tag=LU604_02795 NZ_CP089942.1 Protein Homology CDS 559647 560891 . - 0 ID=cds-WP_233479825.1;Parent=gene-LU604_RS02795;Dbxref=Genbank:WP_233479825.1;Name=WP_233479825.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190930.1;locus_tag=LU604_RS02795;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_233479825.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 561683 562508 . + . ID=gene-LU604_RS02800;Name=LU604_RS02800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02800;old_locus_tag=LU604_02800;pseudo=true NZ_CP089942.1 Protein Homology CDS 561683 562508 . + 0 ID=cds-LU604_RS02800;Parent=gene-LU604_RS02800;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS02800;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 562480 562626 . - . ID=gene-LU604_RS02805;Name=LU604_RS02805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02805;old_locus_tag=LU604_02805;partial=true;pseudo=true;start_range=.,562480 NZ_CP089942.1 Protein Homology CDS 562480 562626 . - 0 ID=cds-LU604_RS02805;Parent=gene-LU604_RS02805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012472779.1;locus_tag=LU604_RS02805;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,562480;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 562689 562916 . + . ID=gene-LU604_RS02810;Name=LU604_RS02810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02810;old_locus_tag=LU604_02810;partial=true;pseudo=true;start_range=.,562689 NZ_CP089942.1 Protein Homology CDS 562689 562916 . + 0 ID=cds-LU604_RS02810;Parent=gene-LU604_RS02810;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU604_RS02810;partial=true;product=transposase;pseudo=true;start_range=.,562689;transl_table=11 NZ_CP089942.1 RefSeq gene 563022 564641 . - . ID=gene-LU604_RS02815;Name=LU604_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02815;old_locus_tag=LU604_02815 NZ_CP089942.1 GeneMarkS-2+ CDS 563022 564641 . - 0 ID=cds-WP_233479826.1;Parent=gene-LU604_RS02815;Dbxref=Genbank:WP_233479826.1;Name=WP_233479826.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS02815;product=hypothetical protein;protein_id=WP_233479826.1;transl_table=11 NZ_CP089942.1 RefSeq gene 565126 565659 . - . ID=gene-LU604_RS02820;Name=LU604_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02820;old_locus_tag=LU604_02820 NZ_CP089942.1 Protein Homology CDS 565126 565659 . - 0 ID=cds-WP_016190933.1;Parent=gene-LU604_RS02820;Dbxref=Genbank:WP_016190933.1;Name=WP_016190933.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS02820;product=transposase;protein_id=WP_016190933.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 565901 566336 . + . ID=gene-LU604_RS02825;Name=LU604_RS02825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02825;old_locus_tag=LU604_02825;partial=true;pseudo=true;start_range=.,565901 NZ_CP089942.1 Protein Homology CDS 565901 566336 . + 0 ID=cds-LU604_RS02825;Parent=gene-LU604_RS02825;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU604_RS02825;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,565901;transl_table=11 NZ_CP089942.1 RefSeq gene 566634 567287 . - . ID=gene-LU604_RS02830;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=LU604_RS02830;old_locus_tag=LU604_02830 NZ_CP089942.1 Protein Homology CDS 566634 567287 . - 0 ID=cds-WP_016190935.1;Parent=gene-LU604_RS02830;Dbxref=Genbank:WP_016190935.1;Name=WP_016190935.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010253813.1;locus_tag=LU604_RS02830;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_016190935.1;transl_table=11 NZ_CP089942.1 RefSeq gene 567327 570233 . - . ID=gene-LU604_RS02835;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=LU604_RS02835;old_locus_tag=LU604_02835 NZ_CP089942.1 Protein Homology CDS 567327 570233 . - 0 ID=cds-WP_233479827.1;Parent=gene-LU604_RS02835;Dbxref=Genbank:WP_233479827.1;Name=WP_233479827.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=LU604_RS02835;product=RNA polymerase-associated protein RapA;protein_id=WP_233479827.1;transl_table=11 NZ_CP089942.1 RefSeq gene 570491 572851 . - . ID=gene-LU604_RS02840;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=LU604_RS02840;old_locus_tag=LU604_02840 NZ_CP089942.1 Protein Homology CDS 570491 572851 . - 0 ID=cds-WP_233479828.1;Parent=gene-LU604_RS02840;Dbxref=Genbank:WP_233479828.1;Name=WP_233479828.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159744.1;locus_tag=LU604_RS02840;product=DNA polymerase II;protein_id=WP_233479828.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 572929 573353 . - . ID=gene-LU604_RS02845;Name=LU604_RS02845;end_range=573353,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS02845;old_locus_tag=LU604_02845;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 572929 573353 . - 0 ID=cds-LU604_RS02845;Parent=gene-LU604_RS02845;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=573353,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343760.1;locus_tag=LU604_RS02845;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 573512 574279 . + . ID=gene-LU604_RS02850;Name=LU604_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02850;old_locus_tag=LU604_02850 NZ_CP089942.1 Protein Homology CDS 573512 574279 . + 0 ID=cds-WP_233479829.1;Parent=gene-LU604_RS02850;Dbxref=Genbank:WP_233479829.1;Name=WP_233479829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200735.1;locus_tag=LU604_RS02850;product=DedA family protein;protein_id=WP_233479829.1;transl_table=11 NZ_CP089942.1 RefSeq gene 574512 575213 . - . ID=gene-LU604_RS02855;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=LU604_RS02855;old_locus_tag=LU604_02855 NZ_CP089942.1 Protein Homology CDS 574512 575213 . - 0 ID=cds-WP_016190941.1;Parent=gene-LU604_RS02855;Dbxref=Genbank:WP_016190941.1;Name=WP_016190941.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800488.1;locus_tag=LU604_RS02855;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_016190941.1;transl_table=11 NZ_CP089942.1 RefSeq gene 575197 576807 . - . ID=gene-LU604_RS02860;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=LU604_RS02860;old_locus_tag=LU604_02860 NZ_CP089942.1 Protein Homology CDS 575197 576807 . - 0 ID=cds-WP_016190942.1;Parent=gene-LU604_RS02860;Dbxref=Genbank:WP_016190942.1;Name=WP_016190942.1;Ontology_term=GO:0015888,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=thiP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=thiamine transport|0015888||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000235706.1;locus_tag=LU604_RS02860;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_016190942.1;transl_table=11 NZ_CP089942.1 RefSeq gene 576783 577769 . - . ID=gene-LU604_RS02865;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=LU604_RS02865;old_locus_tag=LU604_02865 NZ_CP089942.1 Protein Homology CDS 576783 577769 . - 0 ID=cds-WP_233479830.1;Parent=gene-LU604_RS02865;Dbxref=Genbank:WP_233479830.1;Name=WP_233479830.1;Ontology_term=GO:0015888,GO:0030974,GO:0030975,GO:0030976,GO:0048502,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,thiamine pyrophosphate binding|0030976||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA,thiamine pyrophosphate transmembrane transport|0030974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542195.1;locus_tag=LU604_RS02865;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_233479830.1;transl_table=11 NZ_CP089942.1 cmsearch riboswitch 577809 577907 . - . ID=id-NZ_CP089942.1:577809..577907;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP089942.1 RefSeq gene 577944 579605 . - . ID=gene-LU604_RS02870;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=LU604_RS02870;old_locus_tag=LU604_02870 NZ_CP089942.1 Protein Homology CDS 577944 579605 . - 0 ID=cds-WP_233479831.1;Parent=gene-LU604_RS02870;Dbxref=Genbank:WP_233479831.1;Name=WP_233479831.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190944.1;locus_tag=LU604_RS02870;product=HTH-type transcriptional regulator SgrR;protein_id=WP_233479831.1;transl_table=11 NZ_CP089942.1 RefSeq gene 579867 581045 . + . ID=gene-LU604_RS02875;Name=LU604_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02875;old_locus_tag=LU604_02875 NZ_CP089942.1 Protein Homology CDS 579867 581045 . + 0 ID=cds-WP_233479832.1;Parent=gene-LU604_RS02875;Dbxref=Genbank:WP_233479832.1;Name=WP_233479832.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000637847.1;locus_tag=LU604_RS02875;product=MFS transporter;protein_id=WP_233479832.1;transl_table=11 NZ_CP089942.1 RefSeq gene 581173 581343 . + . ID=gene-LU604_RS02880;Name=LU604_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02880;old_locus_tag=LU604_02880 NZ_CP089942.1 GeneMarkS-2+ CDS 581173 581343 . + 0 ID=cds-WP_016190946.1;Parent=gene-LU604_RS02880;Dbxref=Genbank:WP_016190946.1;Name=WP_016190946.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS02880;product=hypothetical protein;protein_id=WP_016190946.1;transl_table=11 NZ_CP089942.1 RefSeq gene 581496 581855 . + . ID=gene-LU604_RS02885;Name=LU604_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02885;old_locus_tag=LU604_02885 NZ_CP089942.1 GeneMarkS-2+ CDS 581496 581855 . + 0 ID=cds-WP_233479833.1;Parent=gene-LU604_RS02885;Dbxref=Genbank:WP_233479833.1;Name=WP_233479833.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS02885;product=hypothetical protein;protein_id=WP_233479833.1;transl_table=11 NZ_CP089942.1 RefSeq gene 582130 582348 . + . ID=gene-LU604_RS02890;Name=LU604_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02890;old_locus_tag=LU604_02890 NZ_CP089942.1 GeneMarkS-2+ CDS 582130 582348 . + 0 ID=cds-WP_233481467.1;Parent=gene-LU604_RS02890;Dbxref=Genbank:WP_233481467.1;Name=WP_233481467.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS02890;product=hypothetical protein;protein_id=WP_233481467.1;transl_table=11 NZ_CP089942.1 RefSeq gene 582393 582998 . - . ID=gene-LU604_RS02895;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=LU604_RS02895;old_locus_tag=LU604_02895 NZ_CP089942.1 Protein Homology CDS 582393 582998 . - 0 ID=cds-WP_016190949.1;Parent=gene-LU604_RS02895;Dbxref=Genbank:WP_016190949.1;Name=WP_016190949.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440487.1;locus_tag=LU604_RS02895;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_016190949.1;transl_table=11 NZ_CP089942.1 RefSeq gene 583008 584417 . - . ID=gene-LU604_RS02900;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=LU604_RS02900;old_locus_tag=LU604_02900 NZ_CP089942.1 Protein Homology CDS 583008 584417 . - 0 ID=cds-WP_016190950.1;Parent=gene-LU604_RS02900;Dbxref=Genbank:WP_016190950.1;Name=WP_016190950.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388979.1;locus_tag=LU604_RS02900;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_016190950.1;transl_table=11 NZ_CP089942.1 RefSeq gene 584420 585508 . - . ID=gene-LU604_RS02905;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=LU604_RS02905;old_locus_tag=LU604_02905 NZ_CP089942.1 Protein Homology CDS 584420 585508 . - 0 ID=cds-WP_233479834.1;Parent=gene-LU604_RS02905;Dbxref=Genbank:WP_233479834.1;Name=WP_233479834.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159730.1;locus_tag=LU604_RS02905;product=3-isopropylmalate dehydrogenase;protein_id=WP_233479834.1;transl_table=11 NZ_CP089942.1 RefSeq gene 585511 587079 . - . ID=gene-LU604_RS02910;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=LU604_RS02910;old_locus_tag=LU604_02910 NZ_CP089942.1 Protein Homology CDS 585511 587079 . - 0 ID=cds-WP_233481468.1;Parent=gene-LU604_RS02910;Dbxref=Genbank:WP_233481468.1;Name=WP_233481468.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=LU604_RS02910;product=2-isopropylmalate synthase;protein_id=WP_233481468.1;transl_table=11 NZ_CP089942.1 RefSeq gene 587982 589706 . + . ID=gene-LU604_RS02915;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=LU604_RS02915;old_locus_tag=LU604_02915 NZ_CP089942.1 Protein Homology CDS 587982 589706 . + 0 ID=cds-WP_233479836.1;Parent=gene-LU604_RS02915;Dbxref=Genbank:WP_233479836.1;Name=WP_233479836.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025294.2;locus_tag=LU604_RS02915;product=acetolactate synthase 3 large subunit;protein_id=WP_233479836.1;transl_table=11 NZ_CP089942.1 RefSeq gene 589709 590200 . + . ID=gene-LU604_RS02920;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=LU604_RS02920;old_locus_tag=LU604_02920 NZ_CP089942.1 Protein Homology CDS 589709 590200 . + 0 ID=cds-WP_016190954.1;Parent=gene-LU604_RS02920;Dbxref=Genbank:WP_016190954.1;Name=WP_016190954.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=LU604_RS02920;product=acetolactate synthase small subunit;protein_id=WP_016190954.1;transl_table=11 NZ_CP089942.1 RefSeq gene 590374 590811 . + . ID=gene-LU604_RS02925;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS02925;old_locus_tag=LU604_02925 NZ_CP089942.1 Protein Homology CDS 590374 590811 . + 0 ID=cds-WP_233479837.1;Parent=gene-LU604_RS02925;Dbxref=Genbank:WP_233479837.1;Name=WP_233479837.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192772.1;locus_tag=LU604_RS02925;product=IS200/IS605 family transposase;protein_id=WP_233479837.1;transl_table=11 NZ_CP089942.1 RefSeq gene 591031 592041 . + . ID=gene-LU604_RS02930;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=LU604_RS02930;old_locus_tag=LU604_02930 NZ_CP089942.1 Protein Homology CDS 591031 592041 . + 0 ID=cds-WP_233479838.1;Parent=gene-LU604_RS02930;Dbxref=Genbank:WP_233479838.1;Name=WP_233479838.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190955.1;locus_tag=LU604_RS02930;product=catabolite repressor/activator;protein_id=WP_233479838.1;transl_table=11 NZ_CP089942.1 RefSeq gene 592579 593037 . + . ID=gene-LU604_RS02935;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=LU604_RS02935;old_locus_tag=LU604_02935 NZ_CP089942.1 Protein Homology CDS 592579 593037 . + 0 ID=cds-WP_016190956.1;Parent=gene-LU604_RS02935;Dbxref=Genbank:WP_016190956.1;Name=WP_016190956.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167064.1;locus_tag=LU604_RS02935;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_016190956.1;transl_table=11 NZ_CP089942.1 RefSeq gene 593040 593981 . + . ID=gene-LU604_RS02940;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=LU604_RS02940;old_locus_tag=LU604_02940 NZ_CP089942.1 Protein Homology CDS 593040 593981 . + 0 ID=cds-WP_016190957.1;Parent=gene-LU604_RS02940;Dbxref=Genbank:WP_016190957.1;Name=WP_016190957.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459125.1;locus_tag=LU604_RS02940;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_016190957.1;transl_table=11 NZ_CP089942.1 RefSeq gene 593978 594298 . + . ID=gene-LU604_RS02945;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=LU604_RS02945;old_locus_tag=LU604_02945 NZ_CP089942.1 Protein Homology CDS 593978 594298 . + 0 ID=cds-WP_016190958.1;Parent=gene-LU604_RS02945;Dbxref=Genbank:WP_016190958.1;Name=WP_016190958.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190958.1;locus_tag=LU604_RS02945;product=cell division protein FtsL;protein_id=WP_016190958.1;transl_table=11 NZ_CP089942.1 RefSeq gene 594307 596079 . + . ID=gene-LU604_RS02950;Name=LU604_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02950;old_locus_tag=LU604_02950 NZ_CP089942.1 Protein Homology CDS 594307 596079 . + 0 ID=cds-WP_233479839.1;Parent=gene-LU604_RS02950;Dbxref=Genbank:WP_233479839.1;Name=WP_233479839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190959.1;locus_tag=LU604_RS02950;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_233479839.1;transl_table=11 NZ_CP089942.1 RefSeq gene 596066 597553 . + . ID=gene-LU604_RS02955;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=LU604_RS02955;old_locus_tag=LU604_02955 NZ_CP089942.1 Protein Homology CDS 596066 597553 . + 0 ID=cds-WP_016190960.1;Parent=gene-LU604_RS02955;Dbxref=Genbank:WP_016190960.1;Name=WP_016190960.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170707.1;locus_tag=LU604_RS02955;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_016190960.1;transl_table=11 NZ_CP089942.1 RefSeq gene 597550 598911 . + . ID=gene-LU604_RS02960;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=LU604_RS02960;old_locus_tag=LU604_02960 NZ_CP089942.1 Protein Homology CDS 597550 598911 . + 0 ID=cds-WP_016190961.1;Parent=gene-LU604_RS02960;Dbxref=Genbank:WP_016190961.1;Name=WP_016190961.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542182.1;locus_tag=LU604_RS02960;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_016190961.1;transl_table=11 NZ_CP089942.1 RefSeq gene 598905 599987 . + . ID=gene-LU604_RS02965;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=LU604_RS02965;old_locus_tag=LU604_02965 NZ_CP089942.1 Protein Homology CDS 598905 599987 . + 0 ID=cds-WP_233479840.1;Parent=gene-LU604_RS02965;Dbxref=Genbank:WP_233479840.1;Name=WP_233479840.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=LU604_RS02965;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_233479840.1;transl_table=11 NZ_CP089942.1 RefSeq gene 599990 601306 . + . ID=gene-LU604_RS02970;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=LU604_RS02970;old_locus_tag=LU604_02970 NZ_CP089942.1 Protein Homology CDS 599990 601306 . + 0 ID=cds-WP_233479841.1;Parent=gene-LU604_RS02970;Dbxref=Genbank:WP_233479841.1;Name=WP_233479841.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225108.1;locus_tag=LU604_RS02970;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_233479841.1;transl_table=11 NZ_CP089942.1 RefSeq gene 601306 602520 . + . ID=gene-LU604_RS02975;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=LU604_RS02975;old_locus_tag=LU604_02975 NZ_CP089942.1 Protein Homology CDS 601306 602520 . + 0 ID=cds-WP_016190964.1;Parent=gene-LU604_RS02975;Dbxref=Genbank:WP_016190964.1;Name=WP_016190964.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210435.1;locus_tag=LU604_RS02975;product=cell division protein FtsW;protein_id=WP_016190964.1;transl_table=11 NZ_CP089942.1 RefSeq gene 602517 603575 . + . ID=gene-LU604_RS02980;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=LU604_RS02980;old_locus_tag=LU604_02980 NZ_CP089942.1 Protein Homology CDS 602517 603575 . + 0 ID=cds-WP_233479842.1;Parent=gene-LU604_RS02980;Dbxref=Genbank:WP_233479842.1;Name=WP_233479842.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190965.1;locus_tag=LU604_RS02980;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_233479842.1;transl_table=11 NZ_CP089942.1 RefSeq gene 603744 605219 . + . ID=gene-LU604_RS02985;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=LU604_RS02985;old_locus_tag=LU604_02985 NZ_CP089942.1 Protein Homology CDS 603744 605219 . + 0 ID=cds-WP_016190966.1;Parent=gene-LU604_RS02985;Dbxref=Genbank:WP_016190966.1;Name=WP_016190966.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159712.1;locus_tag=LU604_RS02985;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_016190966.1;transl_table=11 NZ_CP089942.1 RefSeq gene 605212 606132 . + . ID=gene-LU604_RS02990;Name=LU604_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS02990;old_locus_tag=LU604_02990 NZ_CP089942.1 Protein Homology CDS 605212 606132 . + 0 ID=cds-WP_233479843.1;Parent=gene-LU604_RS02990;Dbxref=Genbank:WP_233479843.1;Name=WP_233479843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000130056.1;locus_tag=LU604_RS02990;product=D-alanine--D-alanine ligase;protein_id=WP_233479843.1;transl_table=11 NZ_CP089942.1 RefSeq gene 606134 606973 . + . ID=gene-LU604_RS02995;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=LU604_RS02995;old_locus_tag=LU604_02995 NZ_CP089942.1 Protein Homology CDS 606134 606973 . + 0 ID=cds-WP_233479844.1;Parent=gene-LU604_RS02995;Dbxref=Genbank:WP_233479844.1;Name=WP_233479844.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542177.1;locus_tag=LU604_RS02995;product=cell division protein FtsQ;protein_id=WP_233479844.1;transl_table=11 NZ_CP089942.1 RefSeq gene 606970 608226 . + . ID=gene-LU604_RS03000;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=LU604_RS03000;old_locus_tag=LU604_03000 NZ_CP089942.1 Protein Homology CDS 606970 608226 . + 0 ID=cds-WP_016190969.1;Parent=gene-LU604_RS03000;Dbxref=Genbank:WP_016190969.1;Name=WP_016190969.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308125.1;locus_tag=LU604_RS03000;product=cell division protein FtsA;protein_id=WP_016190969.1;transl_table=11 NZ_CP089942.1 RefSeq gene 608296 609453 . + . ID=gene-LU604_RS03005;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=LU604_RS03005;old_locus_tag=LU604_03005 NZ_CP089942.1 Protein Homology CDS 608296 609453 . + 0 ID=cds-WP_016190970.1;Parent=gene-LU604_RS03005;Dbxref=Genbank:WP_016190970.1;Name=WP_016190970.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=LU604_RS03005;product=cell division protein FtsZ;protein_id=WP_016190970.1;transl_table=11 NZ_CP089942.1 RefSeq gene 609555 610487 . + . ID=gene-LU604_RS03010;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=LU604_RS03010;old_locus_tag=LU604_03010 NZ_CP089942.1 Protein Homology CDS 609555 610487 . + 0 ID=cds-WP_016190971.1;Parent=gene-LU604_RS03010;Dbxref=Genbank:WP_016190971.1;Name=WP_016190971.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=LU604_RS03010;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_016190971.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 610467 610975 . - . ID=gene-LU604_RS03015;Name=LU604_RS03015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS03015;old_locus_tag=LU604_03015;pseudo=true NZ_CP089942.1 Protein Homology CDS 610467 610975 . - 0 ID=cds-LU604_RS03015;Parent=gene-LU604_RS03015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170700.1;locus_tag=LU604_RS03015;product=DciA family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 610997 611500 . + . ID=gene-LU604_RS03020;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=LU604_RS03020;old_locus_tag=LU604_03020 NZ_CP089942.1 Protein Homology CDS 610997 611500 . + 0 ID=cds-WP_233479845.1;Parent=gene-LU604_RS03020;Dbxref=Genbank:WP_233479845.1;Name=WP_233479845.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190973.1;locus_tag=LU604_RS03020;product=secA translation cis-regulator SecM;protein_id=WP_233479845.1;transl_table=11 NZ_CP089942.1 RefSeq gene 611571 614276 . + . ID=gene-LU604_RS03025;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=LU604_RS03025;old_locus_tag=LU604_03025 NZ_CP089942.1 Protein Homology CDS 611571 614276 . + 0 ID=cds-WP_233479846.1;Parent=gene-LU604_RS03025;Dbxref=Genbank:WP_233479846.1;Name=WP_233479846.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=LU604_RS03025;product=preprotein translocase subunit SecA;protein_id=WP_233479846.1;transl_table=11 NZ_CP089942.1 RefSeq gene 614409 614804 . + . ID=gene-LU604_RS03030;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=LU604_RS03030;old_locus_tag=LU604_03030 NZ_CP089942.1 Protein Homology CDS 614409 614804 . + 0 ID=cds-WP_016190975.1;Parent=gene-LU604_RS03030;Dbxref=Genbank:WP_016190975.1;Name=WP_016190975.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200767.1;locus_tag=LU604_RS03030;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_016190975.1;transl_table=11 NZ_CP089942.1 RefSeq gene 614832 615041 . - . ID=gene-LU604_RS03035;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=LU604_RS03035;old_locus_tag=LU604_03035 NZ_CP089942.1 Protein Homology CDS 614832 615041 . - 0 ID=cds-WP_016190976.1;Parent=gene-LU604_RS03035;Dbxref=Genbank:WP_016190976.1;Name=WP_016190976.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800456.1;locus_tag=LU604_RS03035;product=DNA gyrase inhibitor YacG;protein_id=WP_016190976.1;transl_table=11 NZ_CP089942.1 RefSeq gene 615053 615796 . - . ID=gene-LU604_RS03040;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=LU604_RS03040;old_locus_tag=LU604_03040 NZ_CP089942.1 Protein Homology CDS 615053 615796 . - 0 ID=cds-WP_016190977.1;Parent=gene-LU604_RS03040;Dbxref=Genbank:WP_016190977.1;Name=WP_016190977.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440545.1;locus_tag=LU604_RS03040;product=cell division protein ZapD;protein_id=WP_016190977.1;transl_table=11 NZ_CP089942.1 RefSeq gene 615801 616412 . - . ID=gene-LU604_RS03045;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=LU604_RS03045;old_locus_tag=LU604_03045 NZ_CP089942.1 Protein Homology CDS 615801 616412 . - 0 ID=cds-WP_016190978.1;Parent=gene-LU604_RS03045;Dbxref=Genbank:WP_016190978.1;Name=WP_016190978.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891611.1;locus_tag=LU604_RS03045;product=dephospho-CoA kinase;protein_id=WP_016190978.1;transl_table=11 NZ_CP089942.1 RefSeq gene 616658 617698 . + . ID=gene-LU604_RS03050;Name=LU604_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03050;old_locus_tag=LU604_03050 NZ_CP089942.1 Protein Homology CDS 616658 617698 . + 0 ID=cds-WP_016190979.1;Parent=gene-LU604_RS03050;Dbxref=Genbank:WP_016190979.1;Name=WP_016190979.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015700955.1;locus_tag=LU604_RS03050;product=GMP reductase;protein_id=WP_016190979.1;transl_table=11 NZ_CP089942.1 RefSeq gene 617749 618948 . - . ID=gene-LU604_RS03055;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=LU604_RS03055;old_locus_tag=LU604_03055 NZ_CP089942.1 Protein Homology CDS 617749 618948 . - 0 ID=cds-WP_016190980.1;Parent=gene-LU604_RS03055;Dbxref=Genbank:WP_016190980.1;Name=WP_016190980.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159674.1;locus_tag=LU604_RS03055;product=protein transport protein HofC;protein_id=WP_016190980.1;transl_table=11 NZ_CP089942.1 RefSeq gene 618926 620329 . - . ID=gene-LU604_RS03060;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=LU604_RS03060;old_locus_tag=LU604_03060 NZ_CP089942.1 Protein Homology CDS 618926 620329 . - 0 ID=cds-WP_233480730.1;Parent=gene-LU604_RS03060;Dbxref=Genbank:WP_233480730.1;Name=WP_233480730.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190981.1;locus_tag=LU604_RS03060;product=type II secretion system protein GspE;protein_id=WP_233480730.1;transl_table=11 NZ_CP089942.1 RefSeq gene 620329 620781 . - . ID=gene-LU604_RS03065;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=LU604_RS03065;old_locus_tag=LU604_03065 NZ_CP089942.1 Protein Homology CDS 620329 620781 . - 0 ID=cds-WP_016190982.1;Parent=gene-LU604_RS03065;Dbxref=Genbank:WP_016190982.1;Name=WP_016190982.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356781.1;locus_tag=LU604_RS03065;product=prepilin peptidase-dependent pilin;protein_id=WP_016190982.1;transl_table=11 NZ_CP089942.1 RefSeq gene 620977 621864 . - . ID=gene-LU604_RS03070;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=LU604_RS03070;old_locus_tag=LU604_03070 NZ_CP089942.1 Protein Homology CDS 620977 621864 . - 0 ID=cds-WP_233479847.1;Parent=gene-LU604_RS03070;Dbxref=Genbank:WP_233479847.1;Name=WP_233479847.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542152.1;locus_tag=LU604_RS03070;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_233479847.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 622015 622565 . + . ID=gene-LU604_RS03075;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=pseudogene;locus_tag=LU604_RS03075;old_locus_tag=LU604_03075;pseudo=true NZ_CP089942.1 Protein Homology CDS 622015 622565 . + 0 ID=cds-LU604_RS03075;Parent=gene-LU604_RS03075;Note=frameshifted;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000923695.1;locus_tag=LU604_RS03075;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 622605 623413 . + . ID=gene-LU604_RS03080;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=pseudogene;locus_tag=LU604_RS03080;old_locus_tag=LU604_03080;pseudo=true NZ_CP089942.1 Protein Homology CDS 622605 623413 . + 0 ID=cds-LU604_RS03080;Parent=gene-LU604_RS03080;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ampE;inference=COORDINATES: protein motif:HMM:NF028423.2;locus_tag=LU604_RS03080;product=beta-lactamase regulator AmpE;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 623468 623734 . - . ID=gene-LU604_RS03085;Name=LU604_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03085;old_locus_tag=LU604_03085 NZ_CP089942.1 GeneMarkS-2+ CDS 623468 623734 . - 0 ID=cds-WP_233479848.1;Parent=gene-LU604_RS03085;Dbxref=Genbank:WP_233479848.1;Name=WP_233479848.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS03085;product=hypothetical protein;protein_id=WP_233479848.1;transl_table=11 NZ_CP089942.1 RefSeq gene 624365 624868 . - . ID=gene-LU604_RS03090;Name=LU604_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03090;old_locus_tag=LU604_03090 NZ_CP089942.1 Protein Homology CDS 624365 624868 . - 0 ID=cds-WP_233479849.1;Parent=gene-LU604_RS03090;Dbxref=Genbank:WP_233479849.1;Name=WP_233479849.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU604_RS03090;product=IS1 family transposase;protein_id=WP_233479849.1;transl_table=11 NZ_CP089942.1 RefSeq gene 625235 626590 . - . ID=gene-LU604_RS03100;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=LU604_RS03100;old_locus_tag=LU604_03100 NZ_CP089942.1 Protein Homology CDS 625235 626590 . - 0 ID=cds-WP_233479850.1;Parent=gene-LU604_RS03100;Dbxref=Genbank:WP_233479850.1;Name=WP_233479850.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190989.1;locus_tag=LU604_RS03100;product=aromatic amino acid transporter AroP;protein_id=WP_233479850.1;transl_table=11 NZ_CP089942.1 RefSeq gene 626947 627711 . + . ID=gene-LU604_RS03105;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=LU604_RS03105;old_locus_tag=LU604_03105 NZ_CP089942.1 Protein Homology CDS 626947 627711 . + 0 ID=cds-WP_016190990.1;Parent=gene-LU604_RS03105;Dbxref=Genbank:WP_016190990.1;Name=WP_016190990.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216080.1;locus_tag=LU604_RS03105;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_016190990.1;transl_table=11 NZ_CP089942.1 RefSeq gene 627870 630533 . + . ID=gene-LU604_RS03110;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=LU604_RS03110;old_locus_tag=LU604_03110 NZ_CP089942.1 Protein Homology CDS 627870 630533 . + 0 ID=cds-WP_233479851.1;Parent=gene-LU604_RS03110;Dbxref=Genbank:WP_233479851.1;Name=WP_233479851.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=LU604_RS03110;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_233479851.1;transl_table=11 NZ_CP089942.1 RefSeq gene 630548 632200 . + . ID=gene-LU604_RS03115;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=LU604_RS03115;old_locus_tag=LU604_03115 NZ_CP089942.1 Protein Homology CDS 630548 632200 . + 0 ID=cds-WP_233479852.1;Parent=gene-LU604_RS03115;Dbxref=Genbank:WP_233479852.1;Name=WP_233479852.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015698647.1;locus_tag=LU604_RS03115;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_233479852.1;transl_table=11 NZ_CP089942.1 RefSeq gene 632377 633801 . + . ID=gene-LU604_RS03120;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LU604_RS03120;old_locus_tag=LU604_03120 NZ_CP089942.1 Protein Homology CDS 632377 633801 . + 0 ID=cds-WP_233480731.1;Parent=gene-LU604_RS03120;Dbxref=Genbank:WP_233480731.1;Name=WP_233480731.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=LU604_RS03120;product=dihydrolipoyl dehydrogenase;protein_id=WP_233480731.1;transl_table=11 NZ_CP089942.1 RefSeq gene 633997 634413 . + . ID=gene-LU604_RS03125;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS03125;old_locus_tag=LU604_03125 NZ_CP089942.1 Protein Homology CDS 633997 634413 . + 0 ID=cds-WP_233479853.1;Parent=gene-LU604_RS03125;Dbxref=Genbank:WP_233479853.1;Name=WP_233479853.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190995.1;locus_tag=LU604_RS03125;product=IS200/IS605 family transposase;protein_id=WP_233479853.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 634590 635630 . + . ID=gene-LU604_RS03130;Name=LU604_RS03130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS03130;old_locus_tag=LU604_03130;pseudo=true NZ_CP089942.1 Protein Homology CDS 634590 635630 . + 0 ID=cds-LU604_RS03130;Parent=gene-LU604_RS03130;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS03130;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 635681 636792 . - . ID=gene-LU604_RS03135;Name=LU604_RS03135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS03135;old_locus_tag=LU604_03135;pseudo=true NZ_CP089942.1 Protein Homology CDS 635681 636792 . - 0 ID=cds-LU604_RS03135;Parent=gene-LU604_RS03135;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014333035.1;locus_tag=LU604_RS03135;product=diguanylate phosphodiesterase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 637301 639676 . + . ID=gene-LU604_RS03140;Name=LU604_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03140;old_locus_tag=LU604_03140 NZ_CP089942.1 Protein Homology CDS 637301 639676 . + 0 ID=cds-WP_233479854.1;Parent=gene-LU604_RS03140;Dbxref=Genbank:WP_233479854.1;Name=WP_233479854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669329.1;locus_tag=LU604_RS03140;product=type III effector HrpK;protein_id=WP_233479854.1;transl_table=11 NZ_CP089942.1 RefSeq gene 639764 640093 . - . ID=gene-LU604_RS03145;Name=LU604_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03145;old_locus_tag=LU604_03145 NZ_CP089942.1 GeneMarkS-2+ CDS 639764 640093 . - 0 ID=cds-WP_233479855.1;Parent=gene-LU604_RS03145;Dbxref=Genbank:WP_233479855.1;Name=WP_233479855.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS03145;product=hypothetical protein;protein_id=WP_233479855.1;transl_table=11 NZ_CP089942.1 RefSeq gene 640435 640818 . - . ID=gene-LU604_RS03150;Name=LU604_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03150;old_locus_tag=LU604_03150 NZ_CP089942.1 Protein Homology CDS 640435 640818 . - 0 ID=cds-WP_233479856.1;Parent=gene-LU604_RS03150;Dbxref=Genbank:WP_233479856.1;Name=WP_233479856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168414.1;locus_tag=LU604_RS03150;product=acyl-CoA thioesterase;protein_id=WP_233479856.1;transl_table=11 NZ_CP089942.1 RefSeq gene 641140 641589 . - . ID=gene-LU604_RS03155;Name=LU604_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03155;old_locus_tag=LU604_03155 NZ_CP089942.1 Protein Homology CDS 641140 641589 . - 0 ID=cds-WP_233479857.1;Parent=gene-LU604_RS03155;Dbxref=Genbank:WP_233479857.1;Name=WP_233479857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191003.1;locus_tag=LU604_RS03155;product=GNAT family N-acetyltransferase;protein_id=WP_233479857.1;transl_table=11 NZ_CP089942.1 RefSeq gene 641693 642775 . - . ID=gene-LU604_RS03160;Name=sctU;gbkey=Gene;gene=sctU;gene_biotype=protein_coding;locus_tag=LU604_RS03160;old_locus_tag=LU604_03160 NZ_CP089942.1 Protein Homology CDS 641693 642775 . - 0 ID=cds-WP_233479858.1;Parent=gene-LU604_RS03160;Dbxref=Genbank:WP_233479858.1;Name=WP_233479858.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctU;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168416.1;locus_tag=LU604_RS03160;product=type III secretion system export apparatus subunit SctU;protein_id=WP_233479858.1;transl_table=11 NZ_CP089942.1 RefSeq gene 642775 643572 . - . ID=gene-LU604_RS03165;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=LU604_RS03165;old_locus_tag=LU604_03165 NZ_CP089942.1 Protein Homology CDS 642775 643572 . - 0 ID=cds-WP_016191005.1;Parent=gene-LU604_RS03165;Dbxref=Genbank:WP_016191005.1;Name=WP_016191005.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctT;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171925.1;locus_tag=LU604_RS03165;product=type III secretion system export apparatus subunit SctT;protein_id=WP_016191005.1;transl_table=11 NZ_CP089942.1 RefSeq gene 643574 643834 . - . ID=gene-LU604_RS03170;Name=sctS;gbkey=Gene;gene=sctS;gene_biotype=protein_coding;locus_tag=LU604_RS03170;old_locus_tag=LU604_03170 NZ_CP089942.1 Protein Homology CDS 643574 643834 . - 0 ID=cds-WP_016191006.1;Parent=gene-LU604_RS03170;Dbxref=Genbank:WP_016191006.1;Name=WP_016191006.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669322.1;locus_tag=LU604_RS03170;product=type III secretion system export apparatus subunit SctS;protein_id=WP_016191006.1;transl_table=11 NZ_CP089942.1 RefSeq gene 643842 644495 . - . ID=gene-LU604_RS03175;Name=sctR;gbkey=Gene;gene=sctR;gene_biotype=protein_coding;locus_tag=LU604_RS03175;old_locus_tag=LU604_03175 NZ_CP089942.1 Protein Homology CDS 643842 644495 . - 0 ID=cds-WP_016191007.1;Parent=gene-LU604_RS03175;Dbxref=Genbank:WP_016191007.1;Name=WP_016191007.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctR;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168417.1;locus_tag=LU604_RS03175;product=type III secretion system export apparatus subunit SctR;protein_id=WP_016191007.1;transl_table=11 NZ_CP089942.1 RefSeq gene 644492 645541 . - . ID=gene-LU604_RS03180;Name=sctQ;gbkey=Gene;gene=sctQ;gene_biotype=protein_coding;locus_tag=LU604_RS03180;old_locus_tag=LU604_03180 NZ_CP089942.1 Protein Homology CDS 644492 645541 . - 0 ID=cds-WP_016191008.1;Parent=gene-LU604_RS03180;Dbxref=Genbank:WP_016191008.1;Name=WP_016191008.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctQ;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155343.1;locus_tag=LU604_RS03180;product=type III secretion system cytoplasmic ring protein SctQ;protein_id=WP_016191008.1;transl_table=11 NZ_CP089942.1 RefSeq gene 645538 646011 . - . ID=gene-LU604_RS03185;Name=LU604_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03185;old_locus_tag=LU604_03185 NZ_CP089942.1 Protein Homology CDS 645538 646011 . - 0 ID=cds-WP_233479859.1;Parent=gene-LU604_RS03185;Dbxref=Genbank:WP_233479859.1;Name=WP_233479859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191009.1;locus_tag=LU604_RS03185;product=type III secretion system HrpP C-terminal domain-containing protein;protein_id=WP_233479859.1;transl_table=11 NZ_CP089942.1 RefSeq gene 646011 646454 . - . ID=gene-LU604_RS03190;Name=LU604_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03190;old_locus_tag=LU604_03190 NZ_CP089942.1 Protein Homology CDS 646011 646454 . - 0 ID=cds-WP_016191010.1;Parent=gene-LU604_RS03190;Dbxref=Genbank:WP_016191010.1;Name=WP_016191010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155346.1;locus_tag=LU604_RS03190;product=hypothetical protein;protein_id=WP_016191010.1;transl_table=11 NZ_CP089942.1 RefSeq gene 646438 647805 . - . ID=gene-LU604_RS03195;Name=sctN;gbkey=Gene;gene=sctN;gene_biotype=protein_coding;locus_tag=LU604_RS03195;old_locus_tag=LU604_03195 NZ_CP089942.1 Protein Homology CDS 646438 647805 . - 0 ID=cds-WP_040465545.1;Parent=gene-LU604_RS03195;Dbxref=Genbank:WP_040465545.1;Name=WP_040465545.1;Ontology_term=GO:0030254,GO:0046961,GO:0030257;gbkey=CDS;gene=sctN;go_component=type III protein secretion system complex|0030257||IEA;go_function=proton-transporting ATPase activity%2C rotational mechanism|0046961||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440273.1;locus_tag=LU604_RS03195;product=type III secretion system ATPase SctN;protein_id=WP_040465545.1;transl_table=11 NZ_CP089942.1 RefSeq gene 647799 648719 . - . ID=gene-LU604_RS03200;Name=sctD;gbkey=Gene;gene=sctD;gene_biotype=protein_coding;locus_tag=LU604_RS03200;old_locus_tag=LU604_03200 NZ_CP089942.1 Protein Homology CDS 647799 648719 . - 0 ID=cds-WP_233479860.1;Parent=gene-LU604_RS03200;Dbxref=Genbank:WP_233479860.1;Name=WP_233479860.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctD;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155348.1;locus_tag=LU604_RS03200;product=type III secretion system inner membrane ring subunit SctD;protein_id=WP_233479860.1;transl_table=11 NZ_CP089942.1 RefSeq gene 648698 650851 . - . ID=gene-LU604_RS03205;Name=sctV;gbkey=Gene;gene=sctV;gene_biotype=protein_coding;locus_tag=LU604_RS03205;old_locus_tag=LU604_03205 NZ_CP089942.1 Protein Homology CDS 648698 650851 . - 0 ID=cds-WP_233479861.1;Parent=gene-LU604_RS03205;Dbxref=Genbank:WP_233479861.1;Name=WP_233479861.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=sctV;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171929.1;locus_tag=LU604_RS03205;product=type III secretion system export apparatus subunit SctV;protein_id=WP_233479861.1;transl_table=11 NZ_CP089942.1 RefSeq gene 650852 652018 . - . ID=gene-LU604_RS03210;Name=sctW;gbkey=Gene;gene=sctW;gene_biotype=protein_coding;locus_tag=LU604_RS03210;old_locus_tag=LU604_03210 NZ_CP089942.1 Protein Homology CDS 650852 652018 . - 0 ID=cds-WP_233479862.1;Parent=gene-LU604_RS03210;Dbxref=Genbank:WP_233479862.1;Name=WP_233479862.1;Ontology_term=GO:0030254,GO:0050709,GO:0009986;gbkey=CDS;gene=sctW;go_component=cell surface|0009986||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA,negative regulation of protein secretion|0050709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155350.1;locus_tag=LU604_RS03210;product=type III secretion system gatekeeper subunit SctW;protein_id=WP_233479862.1;transl_table=11 NZ_CP089942.1 RefSeq gene 652295 652843 . + . ID=gene-LU604_RS03215;Name=LU604_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03215;old_locus_tag=LU604_03215 NZ_CP089942.1 Protein Homology CDS 652295 652843 . + 0 ID=cds-WP_016191015.1;Parent=gene-LU604_RS03215;Dbxref=Genbank:WP_016191015.1;Name=WP_016191015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440277.1;locus_tag=LU604_RS03215;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_016191015.1;transl_table=11 NZ_CP089942.1 RefSeq gene 652988 654487 . + . ID=gene-LU604_RS03220;Name=LU604_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03220;old_locus_tag=LU604_03220 NZ_CP089942.1 Protein Homology CDS 652988 654487 . + 0 ID=cds-WP_233479863.1;Parent=gene-LU604_RS03220;Dbxref=Genbank:WP_233479863.1;Name=WP_233479863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191016.1;locus_tag=LU604_RS03220;product=PAS domain-containing sensor histidine kinase;protein_id=WP_233479863.1;transl_table=11 NZ_CP089942.1 RefSeq gene 654480 655121 . + . ID=gene-LU604_RS03225;Name=LU604_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03225;old_locus_tag=LU604_03225 NZ_CP089942.1 Protein Homology CDS 654480 655121 . + 0 ID=cds-WP_016191017.1;Parent=gene-LU604_RS03225;Dbxref=Genbank:WP_016191017.1;Name=WP_016191017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543260.1;locus_tag=LU604_RS03225;product=response regulator transcription factor;protein_id=WP_016191017.1;transl_table=11 NZ_CP089942.1 RefSeq gene 655481 656458 . + . ID=gene-LU604_RS03230;Name=LU604_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03230;old_locus_tag=LU604_03230 NZ_CP089942.1 Protein Homology CDS 655481 656458 . + 0 ID=cds-WP_016191018.1;Parent=gene-LU604_RS03230;Dbxref=Genbank:WP_016191018.1;Name=WP_016191018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155355.1;locus_tag=LU604_RS03230;product=sigma-54 dependent transcriptional regulator;protein_id=WP_016191018.1;transl_table=11 NZ_CP089942.1 RefSeq gene 656699 656902 . + . ID=gene-LU604_RS03235;Name=LU604_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03235;old_locus_tag=LU604_03235 NZ_CP089942.1 Protein Homology CDS 656699 656902 . + 0 ID=cds-WP_233479864.1;Parent=gene-LU604_RS03235;Dbxref=Genbank:WP_233479864.1;Name=WP_233479864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669309.1;locus_tag=LU604_RS03235;product=hypothetical protein;protein_id=WP_233479864.1;transl_table=11 NZ_CP089942.1 RefSeq gene 656970 657335 . + . ID=gene-LU604_RS03240;Name=LU604_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03240;old_locus_tag=LU604_03240 NZ_CP089942.1 Protein Homology CDS 656970 657335 . + 0 ID=cds-WP_233479865.1;Parent=gene-LU604_RS03240;Dbxref=Genbank:WP_233479865.1;Name=WP_233479865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440282.1;locus_tag=LU604_RS03240;product=EscI/YscI/HrpB family type III secretion system inner rod protein;protein_id=WP_233479865.1;transl_table=11 NZ_CP089942.1 RefSeq gene 657341 658117 . + . ID=gene-LU604_RS03245;Name=sctJ;gbkey=Gene;gene=sctJ;gene_biotype=protein_coding;locus_tag=LU604_RS03245;old_locus_tag=LU604_03245 NZ_CP089942.1 Protein Homology CDS 657341 658117 . + 0 ID=cds-WP_233479866.1;Parent=gene-LU604_RS03245;Dbxref=Genbank:WP_233479866.1;Name=WP_233479866.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctJ;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669307.1;locus_tag=LU604_RS03245;product=type III secretion inner membrane ring lipoprotein SctJ;protein_id=WP_233479866.1;transl_table=11 NZ_CP089942.1 RefSeq gene 658110 658700 . + . ID=gene-LU604_RS03250;Name=LU604_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03250;old_locus_tag=LU604_03250 NZ_CP089942.1 Protein Homology CDS 658110 658700 . + 0 ID=cds-WP_016191022.1;Parent=gene-LU604_RS03250;Dbxref=Genbank:WP_016191022.1;Name=WP_016191022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539469.1;locus_tag=LU604_RS03250;product=hypothetical protein;protein_id=WP_016191022.1;transl_table=11 NZ_CP089942.1 RefSeq gene 658694 659278 . + . ID=gene-LU604_RS03255;Name=sctL;gbkey=Gene;gene=sctL;gene_biotype=protein_coding;locus_tag=LU604_RS03255;old_locus_tag=LU604_03255 NZ_CP089942.1 Protein Homology CDS 658694 659278 . + 0 ID=cds-WP_016191023.1;Parent=gene-LU604_RS03255;Dbxref=Genbank:WP_016191023.1;Name=WP_016191023.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctL;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155363.1;locus_tag=LU604_RS03255;product=type III secretion system stator protein SctL;protein_id=WP_016191023.1;transl_table=11 NZ_CP089942.1 RefSeq gene 659365 659601 . + . ID=gene-LU604_RS03260;Name=LU604_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03260;old_locus_tag=LU604_03260 NZ_CP089942.1 Protein Homology CDS 659365 659601 . + 0 ID=cds-WP_016191024.1;Parent=gene-LU604_RS03260;Dbxref=Genbank:WP_016191024.1;Name=WP_016191024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669304.1;locus_tag=LU604_RS03260;product=type III secretion system protein;protein_id=WP_016191024.1;transl_table=11 NZ_CP089942.1 RefSeq gene 659588 660019 . + . ID=gene-LU604_RS03265;Name=LU604_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03265;old_locus_tag=LU604_03265 NZ_CP089942.1 Protein Homology CDS 659588 660019 . + 0 ID=cds-WP_233479867.1;Parent=gene-LU604_RS03265;Dbxref=Genbank:WP_233479867.1;Name=WP_233479867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669303.1;locus_tag=LU604_RS03265;product=type III secretion system protein;protein_id=WP_233479867.1;transl_table=11 NZ_CP089942.1 RefSeq gene 660012 662036 . + . ID=gene-LU604_RS03270;Name=sctC;gbkey=Gene;gene=sctC;gene_biotype=protein_coding;locus_tag=LU604_RS03270;old_locus_tag=LU604_03270 NZ_CP089942.1 Protein Homology CDS 660012 662036 . + 0 ID=cds-WP_233479868.1;Parent=gene-LU604_RS03270;Dbxref=Genbank:WP_233479868.1;Name=WP_233479868.1;gbkey=CDS;gene=sctC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191026.1;locus_tag=LU604_RS03270;product=type III secretion system outer membrane ring subunit SctC;protein_id=WP_233479868.1;transl_table=11 NZ_CP089942.1 RefSeq gene 662051 662245 . + . ID=gene-LU604_RS03275;Name=LU604_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03275;old_locus_tag=LU604_03275 NZ_CP089942.1 Protein Homology CDS 662051 662245 . + 0 ID=cds-WP_040465572.1;Parent=gene-LU604_RS03275;Dbxref=Genbank:WP_040465572.1;Name=WP_040465572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669301.1;locus_tag=LU604_RS03275;product=hypothetical protein;protein_id=WP_040465572.1;transl_table=11 NZ_CP089942.1 RefSeq gene 662238 662588 . + . ID=gene-LU604_RS03280;Name=LU604_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03280;old_locus_tag=LU604_03280 NZ_CP089942.1 Protein Homology CDS 662238 662588 . + 0 ID=cds-WP_233479869.1;Parent=gene-LU604_RS03280;Dbxref=Genbank:WP_233479869.1;Name=WP_233479869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191028.1;locus_tag=LU604_RS03280;product=type III secretion system protein;protein_id=WP_233479869.1;transl_table=11 NZ_CP089942.1 RefSeq gene 662778 663995 . + . ID=gene-LU604_RS03285;Name=LU604_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03285;old_locus_tag=LU604_03285 NZ_CP089942.1 Protein Homology CDS 662778 663995 . + 0 ID=cds-WP_233479870.1;Parent=gene-LU604_RS03285;Dbxref=Genbank:WP_233479870.1;Name=WP_233479870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191029.1;locus_tag=LU604_RS03285;product=harpin HrpZ family protein;protein_id=WP_233479870.1;transl_table=11 NZ_CP089942.1 RefSeq gene 663997 664296 . + . ID=gene-LU604_RS03290;Name=LU604_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03290;old_locus_tag=LU604_03290 NZ_CP089942.1 GeneMarkS-2+ CDS 663997 664296 . + 0 ID=cds-WP_233481469.1;Parent=gene-LU604_RS03290;Dbxref=Genbank:WP_233481469.1;Name=WP_233481469.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS03290;product=type III secretion system chaperone;protein_id=WP_233481469.1;transl_table=11 NZ_CP089942.1 RefSeq gene 664185 664574 . + . ID=gene-LU604_RS03295;Name=LU604_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03295;old_locus_tag=LU604_03295 NZ_CP089942.1 Protein Homology CDS 664185 664574 . + 0 ID=cds-WP_233481470.1;Parent=gene-LU604_RS03295;Dbxref=Genbank:WP_233481470.1;Name=WP_233481470.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017719.2;locus_tag=LU604_RS03295;product=type III secretion system chaperone;protein_id=WP_233481470.1;transl_table=11 NZ_CP089942.1 RefSeq gene 664571 665800 . + . ID=gene-LU604_RS03300;Name=LU604_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03300;old_locus_tag=LU604_03300 NZ_CP089942.1 Protein Homology CDS 664571 665800 . + 0 ID=cds-WP_233479872.1;Parent=gene-LU604_RS03300;Dbxref=Genbank:WP_233479872.1;Name=WP_233479872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155371.1;locus_tag=LU604_RS03300;product=YopJ family acetyltransferase;protein_id=WP_233479872.1;transl_table=11 NZ_CP089942.1 RefSeq gene 665957 666154 . + . ID=gene-LU604_RS03305;Name=LU604_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03305;old_locus_tag=LU604_03305 NZ_CP089942.1 GeneMarkS-2+ CDS 665957 666154 . + 0 ID=cds-WP_046372066.1;Parent=gene-LU604_RS03305;Dbxref=Genbank:WP_046372066.1;Name=WP_046372066.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS03305;product=hypothetical protein;protein_id=WP_046372066.1;transl_table=11 NZ_CP089942.1 RefSeq gene 666202 666360 . - . ID=gene-LU604_RS03310;Name=LU604_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03310;old_locus_tag=LU604_03310 NZ_CP089942.1 GeneMarkS-2+ CDS 666202 666360 . - 0 ID=cds-WP_233479873.1;Parent=gene-LU604_RS03310;Dbxref=Genbank:WP_233479873.1;Name=WP_233479873.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS03310;product=hypothetical protein;protein_id=WP_233479873.1;transl_table=11 NZ_CP089942.1 RefSeq gene 666563 671890 . + . ID=gene-LU604_RS03315;Name=LU604_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03315;old_locus_tag=LU604_03315 NZ_CP089942.1 Protein Homology CDS 666563 671890 . + 0 ID=cds-WP_233479874.1;Parent=gene-LU604_RS03315;Dbxref=Genbank:WP_233479874.1;Name=WP_233479874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191033.1;locus_tag=LU604_RS03315;product=AvrE-family type 3 secretion system effector;protein_id=WP_233479874.1;transl_table=11 NZ_CP089942.1 RefSeq gene 671946 672365 . + . ID=gene-LU604_RS03320;Name=LU604_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03320;old_locus_tag=LU604_03320 NZ_CP089942.1 Protein Homology CDS 671946 672365 . + 0 ID=cds-WP_233480732.1;Parent=gene-LU604_RS03320;Dbxref=Genbank:WP_233480732.1;Name=WP_233480732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191034.1;locus_tag=LU604_RS03320;product=type III secretion system chaperone;protein_id=WP_233480732.1;transl_table=11 NZ_CP089942.1 RefSeq gene 672501 674414 . - . ID=gene-LU604_RS03325;Name=LU604_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03325;old_locus_tag=LU604_03325 NZ_CP089942.1 Protein Homology CDS 672501 674414 . - 0 ID=cds-WP_233479875.1;Parent=gene-LU604_RS03325;Dbxref=Genbank:WP_233479875.1;Name=WP_233479875.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=LU604_RS03325;product=GGDEF domain-containing protein;protein_id=WP_233479875.1;transl_table=11 NZ_CP089942.1 RefSeq gene 674755 675672 . + . ID=gene-LU604_RS03330;Name=LU604_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03330;old_locus_tag=LU604_03330 NZ_CP089942.1 Protein Homology CDS 674755 675672 . + 0 ID=cds-WP_233479876.1;Parent=gene-LU604_RS03330;Dbxref=Genbank:WP_233479876.1;Name=WP_233479876.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191036.1;locus_tag=LU604_RS03330;product=aminoimidazole riboside kinase;protein_id=WP_233479876.1;transl_table=11 NZ_CP089942.1 RefSeq gene 675833 677395 . + . ID=gene-LU604_RS03335;Name=LU604_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03335;old_locus_tag=LU604_03335 NZ_CP089942.1 Protein Homology CDS 675833 677395 . + 0 ID=cds-WP_233479877.1;Parent=gene-LU604_RS03335;Dbxref=Genbank:WP_233479877.1;Name=WP_233479877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835630.1;locus_tag=LU604_RS03335;product=carbohydrate porin;protein_id=WP_233479877.1;transl_table=11 NZ_CP089942.1 RefSeq gene 677461 678831 . + . ID=gene-LU604_RS03340;Name=LU604_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03340;old_locus_tag=LU604_03340 NZ_CP089942.1 Protein Homology CDS 677461 678831 . + 0 ID=cds-WP_016191038.1;Parent=gene-LU604_RS03340;Dbxref=Genbank:WP_016191038.1;Name=WP_016191038.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225625.1;locus_tag=LU604_RS03340;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_016191038.1;transl_table=11 NZ_CP089942.1 RefSeq gene 678831 680240 . + . ID=gene-LU604_RS03345;Name=LU604_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03345;old_locus_tag=LU604_03345 NZ_CP089942.1 Protein Homology CDS 678831 680240 . + 0 ID=cds-WP_233479878.1;Parent=gene-LU604_RS03345;Dbxref=Genbank:WP_233479878.1;Name=WP_233479878.1;Ontology_term=GO:0005975,GO:0004564;gbkey=CDS;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010256926.1;locus_tag=LU604_RS03345;product=sucrose-6-phosphate hydrolase;protein_id=WP_233479878.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 680413 680627 . + . ID=gene-LU604_RS03350;Name=LU604_RS03350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS03350;old_locus_tag=LU604_03350;pseudo=true NZ_CP089942.1 Protein Homology CDS 680413 680627 . + 0 ID=cds-LU604_RS03350;Parent=gene-LU604_RS03350;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137421.1;locus_tag=LU604_RS03350;product=MbeD family mobilization/exclusion protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 680809 681500 . + . ID=gene-LU604_RS03355;Name=LU604_RS03355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS03355;old_locus_tag=LU604_03355;pseudo=true NZ_CP089942.1 Protein Homology CDS 680809 681500 . + 0 ID=cds-LU604_RS03355;Parent=gene-LU604_RS03355;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539164.1;locus_tag=LU604_RS03355;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 681497 681919 . + . ID=gene-LU604_RS03360;Name=LU604_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03360;old_locus_tag=LU604_03360 NZ_CP089942.1 Protein Homology CDS 681497 681919 . + 0 ID=cds-WP_016191041.1;Parent=gene-LU604_RS03360;Dbxref=Genbank:WP_016191041.1;Name=WP_016191041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668627.1;locus_tag=LU604_RS03360;product=hypothetical protein;protein_id=WP_016191041.1;transl_table=11 NZ_CP089942.1 RefSeq gene 681923 682930 . + . ID=gene-LU604_RS03365;Name=LU604_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03365;old_locus_tag=LU604_03365 NZ_CP089942.1 Protein Homology CDS 681923 682930 . + 0 ID=cds-WP_233479879.1;Parent=gene-LU604_RS03365;Dbxref=Genbank:WP_233479879.1;Name=WP_233479879.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191042.1;locus_tag=LU604_RS03365;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_233479879.1;transl_table=11 NZ_CP089942.1 RefSeq gene 683398 684441 . - . ID=gene-LU604_RS03370;Name=LU604_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03370;old_locus_tag=LU604_03370 NZ_CP089942.1 Protein Homology CDS 683398 684441 . - 0 ID=cds-WP_233479880.1;Parent=gene-LU604_RS03370;Dbxref=Genbank:WP_233479880.1;Name=WP_233479880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191043.1;locus_tag=LU604_RS03370;product=ABC transporter ATP-binding protein;protein_id=WP_233479880.1;transl_table=11 NZ_CP089942.1 RefSeq gene 684443 686011 . - . ID=gene-LU604_RS03375;Name=LU604_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03375;old_locus_tag=LU604_03375 NZ_CP089942.1 Protein Homology CDS 684443 686011 . - 0 ID=cds-WP_233481471.1;Parent=gene-LU604_RS03375;Dbxref=Genbank:WP_233481471.1;Name=WP_233481471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191044.1;locus_tag=LU604_RS03375;product=iron ABC transporter permease;protein_id=WP_233481471.1;transl_table=11 NZ_CP089942.1 RefSeq gene 686039 687043 . - . ID=gene-LU604_RS03380;Name=LU604_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03380;old_locus_tag=LU604_03380 NZ_CP089942.1 Protein Homology CDS 686039 687043 . - 0 ID=cds-WP_016191045.1;Parent=gene-LU604_RS03380;Dbxref=Genbank:WP_016191045.1;Name=WP_016191045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012885129.1;locus_tag=LU604_RS03380;product=iron ABC transporter substrate-binding protein;protein_id=WP_016191045.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 687424 688267 . - . ID=gene-LU604_RS03385;Name=LU604_RS03385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS03385;old_locus_tag=LU604_03385;pseudo=true NZ_CP089942.1 Protein Homology CDS 687424 688267 . - 0 ID=cds-LU604_RS03385;Parent=gene-LU604_RS03385;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS03385;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 689029 689241 . - . ID=gene-LU604_RS03390;Name=LU604_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03390;old_locus_tag=LU604_03390 NZ_CP089942.1 GeneMarkS-2+ CDS 689029 689241 . - 0 ID=cds-WP_233479881.1;Parent=gene-LU604_RS03390;Dbxref=Genbank:WP_233479881.1;Name=WP_233479881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS03390;product=hypothetical protein;protein_id=WP_233479881.1;transl_table=11 NZ_CP089942.1 RefSeq gene 689490 691148 . - . ID=gene-LU604_RS03395;Name=LU604_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03395;old_locus_tag=LU604_03395 NZ_CP089942.1 Protein Homology CDS 689490 691148 . - 0 ID=cds-WP_233479882.1;Parent=gene-LU604_RS03395;Dbxref=Genbank:WP_233479882.1;Name=WP_233479882.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013199870.1;locus_tag=LU604_RS03395;product=methyl-accepting chemotaxis protein;protein_id=WP_233479882.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 691526 692223 . - . ID=gene-LU604_RS03400;Name=LU604_RS03400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS03400;old_locus_tag=LU604_03400;pseudo=true NZ_CP089942.1 Protein Homology CDS 691526 692223 . - 0 ID=cds-LU604_RS03400;Parent=gene-LU604_RS03400;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS03400;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 692277 692462 . + . ID=gene-LU604_RS03405;Name=LU604_RS03405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS03405;old_locus_tag=LU604_03405;partial=true;pseudo=true;start_range=.,692277 NZ_CP089942.1 Protein Homology CDS 692277 692462 . + 0 ID=cds-LU604_RS03405;Parent=gene-LU604_RS03405;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000290294.1;locus_tag=LU604_RS03405;partial=true;product=integrase;pseudo=true;start_range=.,692277;transl_table=11 NZ_CP089942.1 RefSeq gene 692467 693081 . + . ID=gene-LU604_RS03410;Name=LU604_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03410;old_locus_tag=LU604_03410 NZ_CP089942.1 Protein Homology CDS 692467 693081 . + 0 ID=cds-WP_040465577.1;Parent=gene-LU604_RS03410;Dbxref=Genbank:WP_040465577.1;Name=WP_040465577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854369.1;locus_tag=LU604_RS03410;product=Fic family protein;protein_id=WP_040465577.1;transl_table=11 NZ_CP089942.1 RefSeq gene 693078 693236 . - . ID=gene-LU604_RS03415;Name=LU604_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03415;old_locus_tag=LU604_03415 NZ_CP089942.1 Protein Homology CDS 693078 693236 . - 0 ID=cds-WP_233479884.1;Parent=gene-LU604_RS03415;Dbxref=Genbank:WP_233479884.1;Name=WP_233479884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210363.1;locus_tag=LU604_RS03415;product=hypothetical protein;protein_id=WP_233479884.1;transl_table=11 NZ_CP089942.1 RefSeq gene 693450 693722 . + . ID=gene-LU604_RS03420;Name=LU604_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03420;old_locus_tag=LU604_03420 NZ_CP089942.1 GeneMarkS-2+ CDS 693450 693722 . + 0 ID=cds-WP_016191051.1;Parent=gene-LU604_RS03420;Dbxref=Genbank:WP_016191051.1;Name=WP_016191051.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS03420;product=HNH endonuclease;protein_id=WP_016191051.1;transl_table=11 NZ_CP089942.1 RefSeq gene 693791 694911 . + . ID=gene-LU604_RS03425;Name=LU604_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03425;old_locus_tag=LU604_03425 NZ_CP089942.1 Protein Homology CDS 693791 694049 . + 0 ID=cds-WP_233479885.1;Parent=gene-LU604_RS03425;Dbxref=Genbank:WP_233479885.1;Name=WP_233479885.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS03425;product=IS3 family transposase;protein_id=WP_233479885.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 694049 694911 . + 2 ID=cds-WP_233479885.1;Parent=gene-LU604_RS03425;Dbxref=Genbank:WP_233479885.1;Name=WP_233479885.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS03425;product=IS3 family transposase;protein_id=WP_233479885.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 694908 695762 . + . ID=gene-LU604_RS03430;Name=LU604_RS03430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS03430;old_locus_tag=LU604_03430;pseudo=true NZ_CP089942.1 Protein Homology CDS 694908 695762 . + 0 ID=cds-LU604_RS03430;Parent=gene-LU604_RS03430;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094385.1;locus_tag=LU604_RS03430;product=DUF4942 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 696043 697443 . + . ID=gene-LU604_RS03435;Name=LU604_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03435;old_locus_tag=LU604_03435 NZ_CP089942.1 Protein Homology CDS 696043 697443 . + 0 ID=cds-WP_233479886.1;Parent=gene-LU604_RS03435;Dbxref=Genbank:WP_233479886.1;Name=WP_233479886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004174240.1;locus_tag=LU604_RS03435;product=integrase family protein;protein_id=WP_233479886.1;transl_table=11 NZ_CP089942.1 RefSeq gene 697453 698076 . + . ID=gene-LU604_RS03440;Name=LU604_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03440;old_locus_tag=LU604_03440 NZ_CP089942.1 GeneMarkS-2+ CDS 697453 698076 . + 0 ID=cds-WP_233479887.1;Parent=gene-LU604_RS03440;Dbxref=Genbank:WP_233479887.1;Name=WP_233479887.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS03440;product=hypothetical protein;protein_id=WP_233479887.1;transl_table=11 NZ_CP089942.1 RefSeq gene 698206 698406 . + . ID=gene-LU604_RS03445;Name=LU604_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03445;old_locus_tag=LU604_03445 NZ_CP089942.1 Protein Homology CDS 698206 698406 . + 0 ID=cds-WP_233479888.1;Parent=gene-LU604_RS03445;Dbxref=Genbank:WP_233479888.1;Name=WP_233479888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005971425.1;locus_tag=LU604_RS03445;product=helix-turn-helix domain-containing protein;protein_id=WP_233479888.1;transl_table=11 NZ_CP089942.1 RefSeq gene 698415 698858 . + . ID=gene-LU604_RS03450;Name=LU604_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03450;old_locus_tag=LU604_03450 NZ_CP089942.1 Protein Homology CDS 698415 698858 . + 0 ID=cds-WP_233479889.1;Parent=gene-LU604_RS03450;Dbxref=Genbank:WP_233479889.1;Name=WP_233479889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015848296.1;locus_tag=LU604_RS03450;product=hypothetical protein;protein_id=WP_233479889.1;transl_table=11 NZ_CP089942.1 RefSeq gene 699037 699225 . - . ID=gene-LU604_RS03455;Name=LU604_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03455;old_locus_tag=LU604_03455 NZ_CP089942.1 Protein Homology CDS 699037 699225 . - 0 ID=cds-WP_233479890.1;Parent=gene-LU604_RS03455;Dbxref=Genbank:WP_233479890.1;Name=WP_233479890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006706534.1;locus_tag=LU604_RS03455;product=hypothetical protein;protein_id=WP_233479890.1;transl_table=11 NZ_CP089942.1 RefSeq gene 699389 699625 . - . ID=gene-LU604_RS03460;Name=LU604_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03460;old_locus_tag=LU604_03460 NZ_CP089942.1 GeneMarkS-2+ CDS 699389 699625 . - 0 ID=cds-WP_233479891.1;Parent=gene-LU604_RS03460;Dbxref=Genbank:WP_233479891.1;Name=WP_233479891.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS03460;product=hypothetical protein;protein_id=WP_233479891.1;transl_table=11 NZ_CP089942.1 RefSeq gene 699827 700069 . + . ID=gene-LU604_RS03465;Name=LU604_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03465;old_locus_tag=LU604_03465 NZ_CP089942.1 Protein Homology CDS 699827 700069 . + 0 ID=cds-WP_233479892.1;Parent=gene-LU604_RS03465;Dbxref=Genbank:WP_233479892.1;Name=WP_233479892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000476150.1;locus_tag=LU604_RS03465;product=DUF4222 domain-containing protein;protein_id=WP_233479892.1;transl_table=11 NZ_CP089942.1 RefSeq gene 700062 702866 . + . ID=gene-LU604_RS03470;Name=LU604_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03470;old_locus_tag=LU604_03470 NZ_CP089942.1 Protein Homology CDS 700062 702866 . + 0 ID=cds-WP_233479893.1;Parent=gene-LU604_RS03470;Dbxref=Genbank:WP_233479893.1;Name=WP_233479893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666448.1;locus_tag=LU604_RS03470;product=TOPRIM and DUF927 domain-containing protein;protein_id=WP_233479893.1;transl_table=11 NZ_CP089942.1 RefSeq gene 703263 703706 . + . ID=gene-LU604_RS03475;Name=LU604_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03475;old_locus_tag=LU604_03475 NZ_CP089942.1 Protein Homology CDS 703263 703706 . + 0 ID=cds-WP_233479894.1;Parent=gene-LU604_RS03475;Dbxref=Genbank:WP_233479894.1;Name=WP_233479894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004140796.1;locus_tag=LU604_RS03475;product=single-stranded DNA-binding protein;protein_id=WP_233479894.1;transl_table=11 NZ_CP089942.1 RefSeq gene 703725 704192 . + . ID=gene-LU604_RS03480;Name=LU604_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03480;old_locus_tag=LU604_03480 NZ_CP089942.1 Protein Homology CDS 703725 704192 . + 0 ID=cds-WP_233479895.1;Parent=gene-LU604_RS03480;Dbxref=Genbank:WP_233479895.1;Name=WP_233479895.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016255.2;locus_tag=LU604_RS03480;product=ProQ/FINO family protein;protein_id=WP_233479895.1;transl_table=11 NZ_CP089942.1 RefSeq gene 704296 705849 . + . ID=gene-LU604_RS03485;Name=LU604_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03485;old_locus_tag=LU604_03485 NZ_CP089942.1 GeneMarkS-2+ CDS 704296 705849 . + 0 ID=cds-WP_233479896.1;Parent=gene-LU604_RS03485;Dbxref=Genbank:WP_233479896.1;Name=WP_233479896.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS03485;product=hypothetical protein;protein_id=WP_233479896.1;transl_table=11 NZ_CP089942.1 RefSeq gene 705888 706367 . + . ID=gene-LU604_RS03490;Name=LU604_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03490;old_locus_tag=LU604_03490 NZ_CP089942.1 Protein Homology CDS 705888 706367 . + 0 ID=cds-WP_233479897.1;Parent=gene-LU604_RS03490;Dbxref=Genbank:WP_233479897.1;Name=WP_233479897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006119990.1;locus_tag=LU604_RS03490;product=hypothetical protein;protein_id=WP_233479897.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 706414 707418 . - . ID=gene-LU604_RS03495;Name=LU604_RS03495;end_range=707418,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS03495;old_locus_tag=LU604_03495;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 706414 707418 . - 0 ID=cds-LU604_RS03495;Parent=gene-LU604_RS03495;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=707418,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU604_RS03495;partial=true;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 707482 707637 . - . ID=gene-LU604_RS03500;Name=LU604_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03500;old_locus_tag=LU604_03500 NZ_CP089942.1 GeneMarkS-2+ CDS 707482 707637 . - 0 ID=cds-WP_233478597.1;Parent=gene-LU604_RS03500;Dbxref=Genbank:WP_233478597.1;Name=WP_233478597.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS03500;product=hypothetical protein;protein_id=WP_233478597.1;transl_table=11 NZ_CP089942.1 RefSeq gene 707668 707823 . + . ID=gene-LU604_RS03505;Name=LU604_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03505;old_locus_tag=LU604_03505 NZ_CP089942.1 GeneMarkS-2+ CDS 707668 707823 . + 0 ID=cds-WP_233479898.1;Parent=gene-LU604_RS03505;Dbxref=Genbank:WP_233479898.1;Name=WP_233479898.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS03505;product=hypothetical protein;protein_id=WP_233479898.1;transl_table=11 NZ_CP089942.1 RefSeq gene 708327 708809 . + . ID=gene-LU604_RS03510;Name=LU604_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03510;old_locus_tag=LU604_03510 NZ_CP089942.1 GeneMarkS-2+ CDS 708327 708809 . + 0 ID=cds-WP_233479899.1;Parent=gene-LU604_RS03510;Dbxref=Genbank:WP_233479899.1;Name=WP_233479899.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS03510;product=hypothetical protein;protein_id=WP_233479899.1;transl_table=11 NZ_CP089942.1 RefSeq gene 708868 709056 . + . ID=gene-LU604_RS03515;Name=LU604_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03515;old_locus_tag=LU604_03515 NZ_CP089942.1 Protein Homology CDS 708868 709056 . + 0 ID=cds-WP_233479900.1;Parent=gene-LU604_RS03515;Dbxref=Genbank:WP_233479900.1;Name=WP_233479900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004150954.1;locus_tag=LU604_RS03515;product=hypothetical protein;protein_id=WP_233479900.1;transl_table=11 NZ_CP089942.1 RefSeq gene 709317 710351 . - . ID=gene-LU604_RS03520;Name=LU604_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03520;old_locus_tag=LU604_03520 NZ_CP089942.1 Protein Homology CDS 709317 710351 . - 0 ID=cds-WP_233481472.1;Parent=gene-LU604_RS03520;Dbxref=Genbank:WP_233481472.1;Name=WP_233481472.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833352.1;locus_tag=LU604_RS03520;product=tyrosine-type recombinase/integrase;protein_id=WP_233481472.1;transl_table=11 NZ_CP089942.1 RefSeq gene 710351 710929 . - . ID=gene-LU604_RS03525;Name=LU604_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03525;old_locus_tag=LU604_03525 NZ_CP089942.1 Protein Homology CDS 710351 710929 . - 0 ID=cds-WP_233481473.1;Parent=gene-LU604_RS03525;Dbxref=Genbank:WP_233481473.1;Name=WP_233481473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001217271.1;locus_tag=LU604_RS03525;product=phage repressor protein CI;protein_id=WP_233481473.1;transl_table=11 NZ_CP089942.1 RefSeq gene 711059 711322 . + . ID=gene-LU604_RS03530;Name=LU604_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03530;old_locus_tag=LU604_03530 NZ_CP089942.1 Protein Homology CDS 711059 711322 . + 0 ID=cds-WP_001630878.1;Parent=gene-LU604_RS03530;Dbxref=Genbank:WP_001630878.1;Name=WP_001630878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835444.1;locus_tag=LU604_RS03530;product=hypothetical protein;protein_id=WP_001630878.1;transl_table=11 NZ_CP089942.1 RefSeq gene 711353 711862 . + . ID=gene-LU604_RS03535;Name=LU604_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03535;old_locus_tag=LU604_03535 NZ_CP089942.1 Protein Homology CDS 711353 711862 . + 0 ID=cds-WP_233481474.1;Parent=gene-LU604_RS03535;Dbxref=Genbank:WP_233481474.1;Name=WP_233481474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228303.1;locus_tag=LU604_RS03535;product=phage regulatory CII family protein;protein_id=WP_233481474.1;transl_table=11 NZ_CP089942.1 RefSeq gene 711870 712070 . + . ID=gene-LU604_RS03540;Name=LU604_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03540;old_locus_tag=LU604_03540 NZ_CP089942.1 Protein Homology CDS 711870 712070 . + 0 ID=cds-WP_233481475.1;Parent=gene-LU604_RS03540;Dbxref=Genbank:WP_233481475.1;Name=WP_233481475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009309681.1;locus_tag=LU604_RS03540;product=DUF2724 domain-containing protein;protein_id=WP_233481475.1;transl_table=11 NZ_CP089942.1 RefSeq gene 712034 712372 . + . ID=gene-LU604_RS03545;Name=LU604_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03545;old_locus_tag=LU604_03545 NZ_CP089942.1 Protein Homology CDS 712034 712372 . + 0 ID=cds-WP_061285086.1;Parent=gene-LU604_RS03545;Dbxref=Genbank:WP_061285086.1;Name=WP_061285086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963466.1;locus_tag=LU604_RS03545;product=DUF5347 domain-containing protein;protein_id=WP_061285086.1;transl_table=11 NZ_CP089942.1 RefSeq gene 712440 712667 . + . ID=gene-LU604_RS03550;Name=LU604_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03550;old_locus_tag=LU604_03550 NZ_CP089942.1 Protein Homology CDS 712440 712667 . + 0 ID=cds-WP_023333493.1;Parent=gene-LU604_RS03550;Dbxref=Genbank:WP_023333493.1;Name=WP_023333493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246235.1;locus_tag=LU604_RS03550;product=DUF2732 domain-containing protein;protein_id=WP_023333493.1;transl_table=11 NZ_CP089942.1 RefSeq gene 712667 712888 . + . ID=gene-LU604_RS03555;Name=LU604_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03555;old_locus_tag=LU604_03555 NZ_CP089942.1 Protein Homology CDS 712667 712888 . + 0 ID=cds-WP_233481476.1;Parent=gene-LU604_RS03555;Dbxref=Genbank:WP_233481476.1;Name=WP_233481476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009309683.1;locus_tag=LU604_RS03555;product=TraR/DksA family transcriptional regulator;protein_id=WP_233481476.1;transl_table=11 NZ_CP089942.1 RefSeq gene 712890 713597 . + . ID=gene-LU604_RS03560;Name=LU604_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03560;old_locus_tag=LU604_03560 NZ_CP089942.1 Protein Homology CDS 712890 713597 . + 0 ID=cds-WP_233481477.1;Parent=gene-LU604_RS03560;Dbxref=Genbank:WP_233481477.1;Name=WP_233481477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015386356.1;locus_tag=LU604_RS03560;product=3'-5' exonuclease;protein_id=WP_233481477.1;transl_table=11 NZ_CP089942.1 RefSeq gene 713594 713875 . + . ID=gene-LU604_RS03565;Name=LU604_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03565;old_locus_tag=LU604_03565 NZ_CP089942.1 Protein Homology CDS 713594 713875 . + 0 ID=cds-WP_233481478.1;Parent=gene-LU604_RS03565;Dbxref=Genbank:WP_233481478.1;Name=WP_233481478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015370188.1;locus_tag=LU604_RS03565;product=DUF5405 family protein;protein_id=WP_233481478.1;transl_table=11 NZ_CP089942.1 RefSeq gene 713868 716093 . + . ID=gene-LU604_RS03570;Name=LU604_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03570;old_locus_tag=LU604_03570 NZ_CP089942.1 Protein Homology CDS 713868 716093 . + 0 ID=cds-WP_233481479.1;Parent=gene-LU604_RS03570;Dbxref=Genbank:WP_233481479.1;Name=WP_233481479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406376.1;locus_tag=LU604_RS03570;product=replication endonuclease;protein_id=WP_233481479.1;transl_table=11 NZ_CP089942.1 RefSeq gene 716212 716652 . + . ID=gene-LU604_RS03575;Name=LU604_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03575;old_locus_tag=LU604_03575 NZ_CP089942.1 Protein Homology CDS 716212 716652 . + 0 ID=cds-WP_053004566.1;Parent=gene-LU604_RS03575;Dbxref=Genbank:WP_053004566.1;Name=WP_053004566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178626.1;locus_tag=LU604_RS03575;product=DinI family protein;protein_id=WP_053004566.1;transl_table=11 NZ_CP089942.1 RefSeq gene 716734 717465 . + . ID=gene-LU604_RS03580;Name=LU604_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03580;old_locus_tag=LU604_03580 NZ_CP089942.1 Protein Homology CDS 716734 717465 . + 0 ID=cds-WP_233481480.1;Parent=gene-LU604_RS03580;Dbxref=Genbank:WP_233481480.1;Name=WP_233481480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228314.1;locus_tag=LU604_RS03580;product=hypothetical protein;protein_id=WP_233481480.1;transl_table=11 NZ_CP089942.1 RefSeq gene 717633 717815 . + . ID=gene-LU604_RS03585;Name=LU604_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03585;old_locus_tag=LU604_03585 NZ_CP089942.1 Protein Homology CDS 717633 717815 . + 0 ID=cds-WP_233481481.1;Parent=gene-LU604_RS03585;Dbxref=Genbank:WP_233481481.1;Name=WP_233481481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001437782.1;locus_tag=LU604_RS03585;product=hypothetical protein;protein_id=WP_233481481.1;transl_table=11 NZ_CP089942.1 RefSeq gene 717951 718973 . - . ID=gene-LU604_RS03590;Name=LU604_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03590;old_locus_tag=LU604_03590 NZ_CP089942.1 Protein Homology CDS 717951 718973 . - 0 ID=cds-WP_233481482.1;Parent=gene-LU604_RS03590;Dbxref=Genbank:WP_233481482.1;Name=WP_233481482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534869.1;locus_tag=LU604_RS03590;product=phage portal protein;protein_id=WP_233481482.1;transl_table=11 NZ_CP089942.1 RefSeq gene 718970 719716 . - . ID=gene-LU604_RS03595;Name=LU604_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03595;old_locus_tag=LU604_03595 NZ_CP089942.1 Protein Homology CDS 718970 719716 . - 0 ID=cds-WP_233481483.1;Parent=gene-LU604_RS03595;Dbxref=Genbank:WP_233481483.1;Name=WP_233481483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534851.1;locus_tag=LU604_RS03595;product=terminase family protein;protein_id=WP_233481483.1;transl_table=11 NZ_CP089942.1 RefSeq gene 719716 721485 . - . ID=gene-LU604_RS03600;Name=LU604_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03600;old_locus_tag=LU604_03600 NZ_CP089942.1 Protein Homology CDS 719716 721485 . - 0 ID=cds-WP_040229165.1;Parent=gene-LU604_RS03600;Dbxref=Genbank:WP_040229165.1;Name=WP_040229165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228317.1;locus_tag=LU604_RS03600;product=terminase ATPase subunit family protein;protein_id=WP_040229165.1;transl_table=11 NZ_CP089942.1 RefSeq gene 721651 722505 . + . ID=gene-LU604_RS03605;Name=LU604_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03605;old_locus_tag=LU604_03605 NZ_CP089942.1 Protein Homology CDS 721651 722505 . + 0 ID=cds-WP_233481484.1;Parent=gene-LU604_RS03605;Dbxref=Genbank:WP_233481484.1;Name=WP_233481484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228318.1;locus_tag=LU604_RS03605;product=GPO family capsid scaffolding protein;protein_id=WP_233481484.1;transl_table=11 NZ_CP089942.1 RefSeq gene 722581 723648 . + . ID=gene-LU604_RS03610;Name=LU604_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03610;old_locus_tag=LU604_03610 NZ_CP089942.1 Protein Homology CDS 722581 723648 . + 0 ID=cds-WP_233481485.1;Parent=gene-LU604_RS03610;Dbxref=Genbank:WP_233481485.1;Name=WP_233481485.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742976.1;locus_tag=LU604_RS03610;product=phage major capsid protein%2C P2 family;protein_id=WP_233481485.1;transl_table=11 NZ_CP089942.1 RefSeq gene 723653 724402 . + . ID=gene-LU604_RS03615;Name=LU604_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03615;old_locus_tag=LU604_03615 NZ_CP089942.1 Protein Homology CDS 723653 724402 . + 0 ID=cds-WP_233481486.1;Parent=gene-LU604_RS03615;Dbxref=Genbank:WP_233481486.1;Name=WP_233481486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526222.1;locus_tag=LU604_RS03615;product=terminase endonuclease subunit;protein_id=WP_233481486.1;transl_table=11 NZ_CP089942.1 RefSeq gene 724496 725005 . + . ID=gene-LU604_RS03620;Name=LU604_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03620;old_locus_tag=LU604_03620 NZ_CP089942.1 Protein Homology CDS 724496 725005 . + 0 ID=cds-WP_016243393.1;Parent=gene-LU604_RS03620;Dbxref=Genbank:WP_016243393.1;Name=WP_016243393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000214251.1;locus_tag=LU604_RS03620;product=head completion/stabilization protein;protein_id=WP_016243393.1;transl_table=11 NZ_CP089942.1 RefSeq gene 725005 725208 . + . ID=gene-LU604_RS03625;Name=LU604_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03625;old_locus_tag=LU604_03625 NZ_CP089942.1 Protein Homology CDS 725005 725208 . + 0 ID=cds-WP_233481487.1;Parent=gene-LU604_RS03625;Dbxref=Genbank:WP_233481487.1;Name=WP_233481487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015973898.1;locus_tag=LU604_RS03625;product=tail protein X;protein_id=WP_233481487.1;transl_table=11 NZ_CP089942.1 RefSeq gene 725199 725420 . + . ID=gene-LU604_RS03630;Name=LU604_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03630;old_locus_tag=LU604_03630 NZ_CP089942.1 Protein Homology CDS 725199 725420 . + 0 ID=cds-WP_001437784.1;Parent=gene-LU604_RS03630;Dbxref=Genbank:WP_001437784.1;Name=WP_001437784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001437784.1;locus_tag=LU604_RS03630;product=HP1 family phage holin;protein_id=WP_001437784.1;transl_table=11 NZ_CP089942.1 RefSeq gene 725404 725916 . + . ID=gene-LU604_RS03635;Name=LU604_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03635;old_locus_tag=LU604_03635 NZ_CP089942.1 Protein Homology CDS 725404 725916 . + 0 ID=cds-WP_233481488.1;Parent=gene-LU604_RS03635;Dbxref=Genbank:WP_233481488.1;Name=WP_233481488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243395.1;locus_tag=LU604_RS03635;product=lysozyme;protein_id=WP_233481488.1;transl_table=11 NZ_CP089942.1 RefSeq gene 725913 726344 . + . ID=gene-LU604_RS03640;Name=LU604_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03640;old_locus_tag=LU604_03640 NZ_CP089942.1 Protein Homology CDS 725913 726344 . + 0 ID=cds-WP_211709402.1;Parent=gene-LU604_RS03640;Dbxref=Genbank:WP_211709402.1;Name=WP_211709402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243396.1;locus_tag=LU604_RS03640;product=DNZ54_00345 family protein;protein_id=WP_211709402.1;transl_table=11 NZ_CP089942.1 RefSeq gene 726344 726754 . + . ID=gene-LU604_RS03645;Name=lysB;gbkey=Gene;gene=lysB;gene_biotype=protein_coding;locus_tag=LU604_RS03645;old_locus_tag=LU604_03645 NZ_CP089942.1 Protein Homology CDS 726344 726754 . + 0 ID=cds-WP_233481638.1;Parent=gene-LU604_RS03645;Dbxref=Genbank:WP_233481638.1;Name=WP_233481638.1;Note=The gene for this Rz-like phage lysis system protein may overlap extensively with the gene for the other spanin subunit%2C the Rz1-like protein in the outer membrane.;gbkey=CDS;gene=lysB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243397.1;locus_tag=LU604_RS03645;product=Rz-like lysis system protein LysB;protein_id=WP_233481638.1;transl_table=11 NZ_CP089942.1 RefSeq gene 726654 726899 . + . ID=gene-LU604_RS03650;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=LU604_RS03650;old_locus_tag=LU604_03650 NZ_CP089942.1 Protein Homology CDS 726654 726899 . + 0 ID=cds-WP_229045982.1;Parent=gene-LU604_RS03650;Dbxref=Genbank:WP_229045982.1;Name=WP_229045982.1;Note=LysC is an Rz1-like component of a phage lytic system%2C substantially overlapping although not fully embedded in the gene for the Rz-like LysB component.;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703019.1;locus_tag=LU604_RS03650;product=Rz1-like lysis system protein LysC;protein_id=WP_229045982.1;transl_table=11 NZ_CP089942.1 RefSeq gene 726862 727329 . + . ID=gene-LU604_RS03655;Name=LU604_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03655;old_locus_tag=LU604_03655 NZ_CP089942.1 Protein Homology CDS 726862 727329 . + 0 ID=cds-WP_233481489.1;Parent=gene-LU604_RS03655;Dbxref=Genbank:WP_233481489.1;Name=WP_233481489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001416708.1;locus_tag=LU604_RS03655;product=phage tail protein;protein_id=WP_233481489.1;transl_table=11 NZ_CP089942.1 RefSeq gene 727322 727771 . + . ID=gene-LU604_RS03660;Name=LU604_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03660;old_locus_tag=LU604_03660 NZ_CP089942.1 Protein Homology CDS 727322 727771 . + 0 ID=cds-WP_233481490.1;Parent=gene-LU604_RS03660;Dbxref=Genbank:WP_233481490.1;Name=WP_233481490.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406368.1;locus_tag=LU604_RS03660;product=phage virion morphogenesis protein;protein_id=WP_233481490.1;transl_table=11 NZ_CP089942.1 RefSeq gene 727840 728475 . + . ID=gene-LU604_RS03665;Name=LU604_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03665;old_locus_tag=LU604_03665 NZ_CP089942.1 Protein Homology CDS 727840 728475 . + 0 ID=cds-WP_181238924.1;Parent=gene-LU604_RS03665;Dbxref=Genbank:WP_181238924.1;Name=WP_181238924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001418849.1;locus_tag=LU604_RS03665;product=phage baseplate assembly protein V;protein_id=WP_181238924.1;transl_table=11 NZ_CP089942.1 RefSeq gene 728472 728819 . + . ID=gene-LU604_RS03670;Name=LU604_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03670;old_locus_tag=LU604_03670 NZ_CP089942.1 Protein Homology CDS 728472 728819 . + 0 ID=cds-WP_000127178.1;Parent=gene-LU604_RS03670;Dbxref=Genbank:WP_000127178.1;Name=WP_000127178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550203.1;locus_tag=LU604_RS03670;product=GPW/gp25 family protein;protein_id=WP_000127178.1;transl_table=11 NZ_CP089942.1 RefSeq gene 728826 729734 . + . ID=gene-LU604_RS03675;Name=LU604_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03675;old_locus_tag=LU604_03675 NZ_CP089942.1 Protein Homology CDS 728826 729734 . + 0 ID=cds-WP_233481491.1;Parent=gene-LU604_RS03675;Dbxref=Genbank:WP_233481491.1;Name=WP_233481491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000246670.1;locus_tag=LU604_RS03675;product=baseplate assembly protein;protein_id=WP_233481491.1;transl_table=11 NZ_CP089942.1 RefSeq gene 729727 730335 . + . ID=gene-LU604_RS03680;Name=LU604_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03680;old_locus_tag=LU604_03680 NZ_CP089942.1 Protein Homology CDS 729727 730335 . + 0 ID=cds-WP_072662402.1;Parent=gene-LU604_RS03680;Dbxref=Genbank:WP_072662402.1;Name=WP_072662402.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015370166.1;locus_tag=LU604_RS03680;product=phage tail protein I;protein_id=WP_072662402.1;transl_table=11 NZ_CP089942.1 RefSeq gene 730332 731354 . + . ID=gene-LU604_RS03685;Name=LU604_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03685;old_locus_tag=LU604_03685 NZ_CP089942.1 Protein Homology CDS 730332 731354 . + 0 ID=cds-WP_233481492.1;Parent=gene-LU604_RS03685;Dbxref=Genbank:WP_233481492.1;Name=WP_233481492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001622316.1;locus_tag=LU604_RS03685;product=phage tail protein;protein_id=WP_233481492.1;transl_table=11 NZ_CP089942.1 RefSeq gene 731354 731950 . + . ID=gene-LU604_RS03690;Name=LU604_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03690;old_locus_tag=LU604_03690 NZ_CP089942.1 Protein Homology CDS 731354 731950 . + 0 ID=cds-WP_233481493.1;Parent=gene-LU604_RS03690;Dbxref=Genbank:WP_233481493.1;Name=WP_233481493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243405.1;locus_tag=LU604_RS03690;product=tail fiber assembly protein;protein_id=WP_233481493.1;transl_table=11 NZ_CP089942.1 RefSeq gene 732081 733259 . + . ID=gene-LU604_RS03695;Name=LU604_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03695;old_locus_tag=LU604_03695 NZ_CP089942.1 Protein Homology CDS 732081 733259 . + 0 ID=cds-WP_233481494.1;Parent=gene-LU604_RS03695;Dbxref=Genbank:WP_233481494.1;Name=WP_233481494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505045.1;locus_tag=LU604_RS03695;product=phage tail sheath protein;protein_id=WP_233481494.1;transl_table=11 NZ_CP089942.1 RefSeq gene 733275 733793 . + . ID=gene-LU604_RS03700;Name=LU604_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03700;old_locus_tag=LU604_03700 NZ_CP089942.1 Protein Homology CDS 733275 733793 . + 0 ID=cds-WP_001207674.1;Parent=gene-LU604_RS03700;Dbxref=Genbank:WP_001207674.1;Name=WP_001207674.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817465.1;locus_tag=LU604_RS03700;product=phage major tail tube protein;protein_id=WP_001207674.1;transl_table=11 NZ_CP089942.1 RefSeq gene 733855 734190 . + . ID=gene-LU604_RS03705;Name=LU604_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03705;old_locus_tag=LU604_03705 NZ_CP089942.1 Protein Homology CDS 733855 734190 . + 0 ID=cds-WP_096185608.1;Parent=gene-LU604_RS03705;Dbxref=Genbank:WP_096185608.1;Name=WP_096185608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406359.1;locus_tag=LU604_RS03705;product=phage tail assembly protein;protein_id=WP_096185608.1;transl_table=11 NZ_CP089942.1 RefSeq gene 734223 734342 . + . ID=gene-LU604_RS03710;Name=LU604_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03710;old_locus_tag=LU604_03710 NZ_CP089942.1 Protein Homology CDS 734223 734342 . + 0 ID=cds-WP_000763323.1;Parent=gene-LU604_RS03710;Dbxref=Genbank:WP_000763323.1;Name=WP_000763323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143828.1;locus_tag=LU604_RS03710;product=GpE family phage tail protein;protein_id=WP_000763323.1;transl_table=11 NZ_CP089942.1 RefSeq gene 734335 736776 . + . ID=gene-LU604_RS03715;Name=LU604_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03715;old_locus_tag=LU604_03715 NZ_CP089942.1 Protein Homology CDS 734335 736776 . + 0 ID=cds-WP_233481495.1;Parent=gene-LU604_RS03715;Dbxref=Genbank:WP_233481495.1;Name=WP_233481495.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000069526.1;locus_tag=LU604_RS03715;product=phage tail tape measure protein;protein_id=WP_233481495.1;transl_table=11 NZ_CP089942.1 RefSeq gene 736789 737274 . + . ID=gene-LU604_RS03720;Name=LU604_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03720;old_locus_tag=LU604_03720 NZ_CP089942.1 Protein Homology CDS 736789 737274 . + 0 ID=cds-WP_233481496.1;Parent=gene-LU604_RS03720;Dbxref=Genbank:WP_233481496.1;Name=WP_233481496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000978867.1;locus_tag=LU604_RS03720;product=phage tail protein;protein_id=WP_233481496.1;transl_table=11 NZ_CP089942.1 RefSeq gene 737271 738440 . + . ID=gene-LU604_RS03725;Name=LU604_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03725;old_locus_tag=LU604_03725 NZ_CP089942.1 Protein Homology CDS 737271 738440 . + 0 ID=cds-WP_233481497.1;Parent=gene-LU604_RS03725;Dbxref=Genbank:WP_233481497.1;Name=WP_233481497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627823.1;locus_tag=LU604_RS03725;product=phage late control D family protein;protein_id=WP_233481497.1;transl_table=11 NZ_CP089942.1 RefSeq gene 738507 738725 . + . ID=gene-LU604_RS03730;Name=LU604_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03730;old_locus_tag=LU604_03730 NZ_CP089942.1 Protein Homology CDS 738507 738725 . + 0 ID=cds-WP_023135249.1;Parent=gene-LU604_RS03730;Dbxref=Genbank:WP_023135249.1;Name=WP_023135249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000468310.1;locus_tag=LU604_RS03730;product=DNA-binding transcriptional regulator;protein_id=WP_023135249.1;transl_table=11 NZ_CP089942.1 RefSeq gene 738883 738959 . - . ID=gene-LU604_RS03735;Name=LU604_RS03735;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS03735;old_locus_tag=LU604_03735 NZ_CP089942.1 tRNAscan-SE tRNA 738883 738959 . - . ID=rna-LU604_RS03735;Parent=gene-LU604_RS03735;anticodon=(pos:complement(738923..738925));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS03735;product=tRNA-Ile NZ_CP089942.1 tRNAscan-SE exon 738883 738959 . - . ID=exon-LU604_RS03735-1;Parent=rna-LU604_RS03735;anticodon=(pos:complement(738923..738925));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS03735;product=tRNA-Ile NZ_CP089942.1 RefSeq gene 739229 740695 . - . ID=gene-LU604_RS03740;Name=LU604_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03740;old_locus_tag=LU604_03740 NZ_CP089942.1 Protein Homology CDS 739229 740695 . - 0 ID=cds-WP_233479932.1;Parent=gene-LU604_RS03740;Dbxref=Genbank:WP_233479932.1;Name=WP_233479932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191052.1;locus_tag=LU604_RS03740;product=PepSY-associated TM helix domain-containing protein;protein_id=WP_233479932.1;transl_table=11 NZ_CP089942.1 RefSeq gene 740771 741208 . - . ID=gene-LU604_RS03745;Name=LU604_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03745;old_locus_tag=LU604_03745 NZ_CP089942.1 Protein Homology CDS 740771 741208 . - 0 ID=cds-WP_016191053.1;Parent=gene-LU604_RS03745;Dbxref=Genbank:WP_016191053.1;Name=WP_016191053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542306.1;locus_tag=LU604_RS03745;product=DUF2946 family protein;protein_id=WP_016191053.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 741448 742577 . + . ID=gene-LU604_RS03750;Name=LU604_RS03750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS03750;old_locus_tag=LU604_03750;pseudo=true NZ_CP089942.1 Protein Homology CDS 741448 742577 . + 0 ID=cds-LU604_RS03750;Parent=gene-LU604_RS03750;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444076.1;locus_tag=LU604_RS03750;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 742649 743122 . - . ID=gene-LU604_RS03755;Name=LU604_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03755;old_locus_tag=LU604_03755 NZ_CP089942.1 Protein Homology CDS 742649 743122 . - 0 ID=cds-WP_233479933.1;Parent=gene-LU604_RS03755;Dbxref=Genbank:WP_233479933.1;Name=WP_233479933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191055.1;locus_tag=LU604_RS03755;product=YbaK/EbsC family protein;protein_id=WP_233479933.1;transl_table=11 NZ_CP089942.1 RefSeq gene 743194 743520 . - . ID=gene-LU604_RS03760;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=LU604_RS03760;old_locus_tag=LU604_03760 NZ_CP089942.1 Protein Homology CDS 743194 743520 . - 0 ID=cds-WP_232426859.1;Parent=gene-LU604_RS03760;Dbxref=Genbank:WP_232426859.1;Name=WP_232426859.1;Ontology_term=GO:0033214,GO:0008199,GO:0016491,GO:0051537;gbkey=CDS;gene=fhuF;go_function=ferric iron binding|0008199||IEA,oxidoreductase activity|0016491||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=siderophore-dependent iron import into cell|0033214||IEA;inference=COORDINATES: protein motif:HMM:TIGR03951.1;locus_tag=LU604_RS03760;product=siderophore-iron reductase FhuF;protein_id=WP_232426859.1;transl_table=11 NZ_CP089942.1 RefSeq gene 743471 743914 . - . ID=gene-LU604_RS03765;Name=LU604_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03765;old_locus_tag=LU604_03765 NZ_CP089942.1 GeneMarkS-2+ CDS 743471 743914 . - 0 ID=cds-WP_232426860.1;Parent=gene-LU604_RS03765;Dbxref=Genbank:WP_232426860.1;Name=WP_232426860.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS03765;product=hypothetical protein;protein_id=WP_232426860.1;transl_table=11 NZ_CP089942.1 RefSeq gene 744322 744825 . - . ID=gene-LU604_RS03770;Name=LU604_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03770;old_locus_tag=LU604_03770 NZ_CP089942.1 Protein Homology CDS 744322 744825 . - 0 ID=cds-WP_233481498.1;Parent=gene-LU604_RS03770;Dbxref=Genbank:WP_233481498.1;Name=WP_233481498.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU604_RS03770;product=IS1 family transposase;protein_id=WP_233481498.1;transl_table=11 NZ_CP089942.1 RefSeq gene 744744 745019 . - . ID=gene-LU604_RS03775;Name=LU604_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03775;old_locus_tag=LU604_03775 NZ_CP089942.1 Protein Homology CDS 744744 745019 . - 0 ID=cds-WP_233481499.1;Parent=gene-LU604_RS03775;Dbxref=Genbank:WP_233481499.1;Name=WP_233481499.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU604_RS03775;product=IS1-like element transposase;protein_id=WP_233481499.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 745101 745354 . - . ID=gene-LU604_RS03780;Name=LU604_RS03780;end_range=745354,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS03780;old_locus_tag=LU604_03780;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 745101 745354 . - 0 ID=cds-LU604_RS03780;Parent=gene-LU604_RS03780;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=745354,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800973.1;locus_tag=LU604_RS03780;partial=true;product=diguanylate cyclase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 745442 745717 . + . ID=gene-LU604_RS03785;Name=LU604_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03785;old_locus_tag=LU604_03785 NZ_CP089942.1 Protein Homology CDS 745442 745717 . + 0 ID=cds-WP_016191057.1;Parent=gene-LU604_RS03785;Dbxref=Genbank:WP_016191057.1;Name=WP_016191057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800972.1;locus_tag=LU604_RS03785;product=DUF1435 domain-containing protein;protein_id=WP_016191057.1;transl_table=11 NZ_CP089942.1 RefSeq gene 745806 745892 . - . ID=gene-LU604_RS03790;Name=LU604_RS03790;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS03790;old_locus_tag=LU604_03790 NZ_CP089942.1 tRNAscan-SE tRNA 745806 745892 . - . ID=rna-LU604_RS03790;Parent=gene-LU604_RS03790;anticodon=(pos:complement(745856..745858));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS03790;product=tRNA-Leu NZ_CP089942.1 tRNAscan-SE exon 745806 745892 . - . ID=exon-LU604_RS03790-1;Parent=rna-LU604_RS03790;anticodon=(pos:complement(745856..745858));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS03790;product=tRNA-Leu NZ_CP089942.1 RefSeq gene 746182 746697 . + . ID=gene-LU604_RS03795;Name=LU604_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03795;old_locus_tag=LU604_03795 NZ_CP089942.1 GeneMarkS-2+ CDS 746182 746697 . + 0 ID=cds-WP_233479935.1;Parent=gene-LU604_RS03795;Dbxref=Genbank:WP_233479935.1;Name=WP_233479935.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS03795;product=hypothetical protein;protein_id=WP_233479935.1;transl_table=11 NZ_CP089942.1 RefSeq gene 746801 747829 . - . ID=gene-LU604_RS03800;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=LU604_RS03800;old_locus_tag=LU604_03800 NZ_CP089942.1 Protein Homology CDS 746801 747829 . - 0 ID=cds-WP_016191060.1;Parent=gene-LU604_RS03800;Dbxref=Genbank:WP_016191060.1;Name=WP_016191060.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004886503.1;locus_tag=LU604_RS03800;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_016191060.1;transl_table=11 NZ_CP089942.1 RefSeq gene 747969 748382 . + . ID=gene-LU604_RS03805;Name=LU604_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03805;old_locus_tag=LU604_03805 NZ_CP089942.1 Protein Homology CDS 747969 748382 . + 0 ID=cds-WP_040465549.1;Parent=gene-LU604_RS03805;Dbxref=Genbank:WP_040465549.1;Name=WP_040465549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209207.1;locus_tag=LU604_RS03805;product=DNA polymerase III subunit psi;protein_id=WP_040465549.1;transl_table=11 NZ_CP089942.1 RefSeq gene 748351 748791 . + . ID=gene-LU604_RS03810;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=LU604_RS03810;old_locus_tag=LU604_03810 NZ_CP089942.1 Protein Homology CDS 748351 748791 . + 0 ID=cds-WP_016191062.1;Parent=gene-LU604_RS03810;Dbxref=Genbank:WP_016191062.1;Name=WP_016191062.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666972.1;locus_tag=LU604_RS03810;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_016191062.1;transl_table=11 NZ_CP089942.1 RefSeq gene 748862 749542 . + . ID=gene-LU604_RS03815;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=LU604_RS03815;old_locus_tag=LU604_03815 NZ_CP089942.1 Protein Homology CDS 748862 749542 . + 0 ID=cds-WP_233479936.1;Parent=gene-LU604_RS03815;Dbxref=Genbank:WP_233479936.1;Name=WP_233479936.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170827.1;locus_tag=LU604_RS03815;product=pyrimidine 5'-nucleotidase;protein_id=WP_233479936.1;transl_table=11 NZ_CP089942.1 RefSeq gene 750464 750964 . + . ID=gene-LU604_RS03820;Name=LU604_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03820;old_locus_tag=LU604_03820 NZ_CP089942.1 Protein Homology CDS 750464 750964 . + 0 ID=cds-WP_016191064.1;Parent=gene-LU604_RS03820;Dbxref=Genbank:WP_016191064.1;Name=WP_016191064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004164804.1;locus_tag=LU604_RS03820;product=hypothetical protein;protein_id=WP_016191064.1;transl_table=11 NZ_CP089942.1 RefSeq gene 750989 751525 . + . ID=gene-LU604_RS03825;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LU604_RS03825;old_locus_tag=LU604_03825 NZ_CP089942.1 Protein Homology CDS 750989 751525 . + 0 ID=cds-WP_016191065.1;Parent=gene-LU604_RS03825;Dbxref=Genbank:WP_016191065.1;Name=WP_016191065.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159922.1;locus_tag=LU604_RS03825;product=type VI secretion system lipoprotein TssJ;protein_id=WP_016191065.1;transl_table=11 NZ_CP089942.1 RefSeq gene 751522 752865 . + . ID=gene-LU604_RS03830;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LU604_RS03830;old_locus_tag=LU604_03830 NZ_CP089942.1 Protein Homology CDS 751522 752865 . + 0 ID=cds-WP_233479937.1;Parent=gene-LU604_RS03830;Dbxref=Genbank:WP_233479937.1;Name=WP_233479937.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159916.1;locus_tag=LU604_RS03830;product=type VI secretion system baseplate subunit TssK;protein_id=WP_233479937.1;transl_table=11 NZ_CP089942.1 RefSeq gene 752883 754118 . + . ID=gene-LU604_RS03835;Name=LU604_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03835;old_locus_tag=LU604_03835 NZ_CP089942.1 Protein Homology CDS 752883 754118 . + 0 ID=cds-WP_233479938.1;Parent=gene-LU604_RS03835;Dbxref=Genbank:WP_233479938.1;Name=WP_233479938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200615.1;locus_tag=LU604_RS03835;product=DotU family type VI secretion system protein;protein_id=WP_233479938.1;transl_table=11 NZ_CP089942.1 RefSeq gene 754122 757634 . + . ID=gene-LU604_RS03840;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=LU604_RS03840;old_locus_tag=LU604_03840 NZ_CP089942.1 Protein Homology CDS 754122 757634 . + 0 ID=cds-WP_233481500.1;Parent=gene-LU604_RS03840;Dbxref=Genbank:WP_233481500.1;Name=WP_233481500.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssM;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666978.1;locus_tag=LU604_RS03840;product=type VI secretion system membrane subunit TssM;protein_id=WP_233481500.1;transl_table=11 NZ_CP089942.1 RefSeq gene 757651 758364 . + . ID=gene-LU604_RS03845;Name=tagF;gbkey=Gene;gene=tagF;gene_biotype=protein_coding;locus_tag=LU604_RS03845;old_locus_tag=LU604_03845 NZ_CP089942.1 Protein Homology CDS 757651 758364 . + 0 ID=cds-WP_233479940.1;Parent=gene-LU604_RS03845;Dbxref=Genbank:WP_233479940.1;Name=WP_233479940.1;gbkey=CDS;gene=tagF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004385967.1;locus_tag=LU604_RS03845;product=type VI secretion system-associated protein TagF;protein_id=WP_233479940.1;transl_table=11 NZ_CP089942.1 RefSeq gene 758380 759399 . + . ID=gene-LU604_RS03850;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=LU604_RS03850;old_locus_tag=LU604_03850 NZ_CP089942.1 Protein Homology CDS 758380 759399 . + 0 ID=cds-WP_233479941.1;Parent=gene-LU604_RS03850;Dbxref=Genbank:WP_233479941.1;Name=WP_233479941.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191070.1;locus_tag=LU604_RS03850;product=type VI secretion system protein TssA;protein_id=WP_233479941.1;transl_table=11 NZ_CP089942.1 RefSeq gene 759449 759973 . + . ID=gene-LU604_RS03855;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=LU604_RS03855;old_locus_tag=LU604_03855 NZ_CP089942.1 Protein Homology CDS 759449 759973 . + 0 ID=cds-WP_233479942.1;Parent=gene-LU604_RS03855;Dbxref=Genbank:WP_233479942.1;Name=WP_233479942.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191071.1;locus_tag=LU604_RS03855;product=type VI secretion system contractile sheath small subunit;protein_id=WP_233479942.1;transl_table=11 NZ_CP089942.1 RefSeq gene 759977 761479 . + . ID=gene-LU604_RS03860;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LU604_RS03860;old_locus_tag=LU604_03860 NZ_CP089942.1 Protein Homology CDS 759977 761479 . + 0 ID=cds-WP_233479943.1;Parent=gene-LU604_RS03860;Dbxref=Genbank:WP_233479943.1;Name=WP_233479943.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542290.1;locus_tag=LU604_RS03860;product=type VI secretion system contractile sheath large subunit;protein_id=WP_233479943.1;transl_table=11 NZ_CP089942.1 RefSeq gene 762173 762655 . + . ID=gene-LU604_RS03865;Name=LU604_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03865;old_locus_tag=LU604_03865 NZ_CP089942.1 Protein Homology CDS 762173 762655 . + 0 ID=cds-WP_233479944.1;Parent=gene-LU604_RS03865;Dbxref=Genbank:WP_233479944.1;Name=WP_233479944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366565.1;locus_tag=LU604_RS03865;product=type VI secretion system tube protein Hcp;protein_id=WP_233479944.1;transl_table=11 NZ_CP089942.1 RefSeq gene 762752 763468 . + . ID=gene-LU604_RS03870;Name=LU604_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03870;old_locus_tag=LU604_03870 NZ_CP089942.1 Protein Homology CDS 762752 763468 . + 0 ID=cds-WP_233479945.1;Parent=gene-LU604_RS03870;Dbxref=Genbank:WP_233479945.1;Name=WP_233479945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191074.1;locus_tag=LU604_RS03870;product=peptidoglycan-binding protein;protein_id=WP_233479945.1;transl_table=11 NZ_CP089942.1 RefSeq gene 763476 763979 . - . ID=gene-LU604_RS03875;Name=LU604_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03875;old_locus_tag=LU604_03875 NZ_CP089942.1 Protein Homology CDS 763476 763979 . - 0 ID=cds-WP_233481501.1;Parent=gene-LU604_RS03875;Dbxref=Genbank:WP_233481501.1;Name=WP_233481501.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU604_RS03875;product=IS1 family transposase;protein_id=WP_233481501.1;transl_table=11 NZ_CP089942.1 RefSeq gene 763898 764173 . - . ID=gene-LU604_RS03880;Name=LU604_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03880;old_locus_tag=LU604_03880 NZ_CP089942.1 Protein Homology CDS 763898 764173 . - 0 ID=cds-WP_016192850.1;Parent=gene-LU604_RS03880;Dbxref=Genbank:WP_016192850.1;Name=WP_016192850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU604_RS03880;product=transposase;protein_id=WP_016192850.1;transl_table=11 NZ_CP089942.1 RefSeq gene 764324 764599 . + . ID=gene-LU604_RS03885;Name=LU604_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03885;old_locus_tag=LU604_03885 NZ_CP089942.1 GeneMarkS-2+ CDS 764324 764599 . + 0 ID=cds-WP_233479947.1;Parent=gene-LU604_RS03885;Dbxref=Genbank:WP_233479947.1;Name=WP_233479947.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS03885;product=hypothetical protein;protein_id=WP_233479947.1;transl_table=11 NZ_CP089942.1 RefSeq gene 764856 766700 . + . ID=gene-LU604_RS03890;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=LU604_RS03890;old_locus_tag=LU604_03890 NZ_CP089942.1 Protein Homology CDS 764856 766700 . + 0 ID=cds-WP_233479948.1;Parent=gene-LU604_RS03890;Dbxref=Genbank:WP_233479948.1;Name=WP_233479948.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tagH;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200624.1;locus_tag=LU604_RS03890;product=type VI secretion system-associated FHA domain protein TagH;protein_id=WP_233479948.1;transl_table=11 NZ_CP089942.1 RefSeq gene 766700 767494 . + . ID=gene-LU604_RS03895;Name=LU604_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03895;old_locus_tag=LU604_03895 NZ_CP089942.1 Protein Homology CDS 766700 767494 . + 0 ID=cds-WP_233480733.1;Parent=gene-LU604_RS03895;Dbxref=Genbank:WP_233480733.1;Name=WP_233480733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009090744.1;locus_tag=LU604_RS03895;product=protein phosphatase 2C domain-containing protein;protein_id=WP_233480733.1;transl_table=11 NZ_CP089942.1 RefSeq gene 767513 768565 . + . ID=gene-LU604_RS03900;Name=LU604_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03900;old_locus_tag=LU604_03900 NZ_CP089942.1 Protein Homology CDS 767513 768565 . + 0 ID=cds-WP_233479949.1;Parent=gene-LU604_RS03900;Dbxref=Genbank:WP_233479949.1;Name=WP_233479949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440377.1;locus_tag=LU604_RS03900;product=hypothetical protein;protein_id=WP_233479949.1;transl_table=11 NZ_CP089942.1 RefSeq gene 768591 769415 . + . ID=gene-LU604_RS03905;Name=LU604_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03905;old_locus_tag=LU604_03905 NZ_CP089942.1 Protein Homology CDS 768591 769415 . + 0 ID=cds-WP_233479950.1;Parent=gene-LU604_RS03905;Dbxref=Genbank:WP_233479950.1;Name=WP_233479950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191079.1;locus_tag=LU604_RS03905;product=type VI secretion system accessory protein TagJ;protein_id=WP_233479950.1;transl_table=11 NZ_CP089942.1 RefSeq gene 769408 769983 . + . ID=gene-LU604_RS03910;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=LU604_RS03910;old_locus_tag=LU604_03910 NZ_CP089942.1 Protein Homology CDS 769408 769983 . + 0 ID=cds-WP_016191080.1;Parent=gene-LU604_RS03910;Dbxref=Genbank:WP_016191080.1;Name=WP_016191080.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200628.1;locus_tag=LU604_RS03910;product=type VI secretion system baseplate subunit TssE;protein_id=WP_016191080.1;transl_table=11 NZ_CP089942.1 RefSeq gene 769986 771863 . + . ID=gene-LU604_RS03915;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LU604_RS03915;old_locus_tag=LU604_03915 NZ_CP089942.1 Protein Homology CDS 769986 771863 . + 0 ID=cds-WP_233481502.1;Parent=gene-LU604_RS03915;Dbxref=Genbank:WP_233481502.1;Name=WP_233481502.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159879.1;locus_tag=LU604_RS03915;product=type VI secretion system baseplate subunit TssF;protein_id=WP_233481502.1;transl_table=11 NZ_CP089942.1 RefSeq gene 771860 772912 . + . ID=gene-LU604_RS03920;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LU604_RS03920;old_locus_tag=LU604_03920 NZ_CP089942.1 Protein Homology CDS 771860 772912 . + 0 ID=cds-WP_016191082.1;Parent=gene-LU604_RS03920;Dbxref=Genbank:WP_016191082.1;Name=WP_016191082.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440381.1;locus_tag=LU604_RS03920;product=type VI secretion system baseplate subunit TssG;protein_id=WP_016191082.1;transl_table=11 NZ_CP089942.1 RefSeq gene 772959 773720 . + . ID=gene-LU604_RS03925;Name=LU604_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03925;old_locus_tag=LU604_03925 NZ_CP089942.1 Protein Homology CDS 772959 773720 . + 0 ID=cds-WP_233479952.1;Parent=gene-LU604_RS03925;Dbxref=Genbank:WP_233479952.1;Name=WP_233479952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191083.1;locus_tag=LU604_RS03925;product=DUF4225 domain-containing protein;protein_id=WP_233479952.1;transl_table=11 NZ_CP089942.1 RefSeq gene 774143 776758 . + . ID=gene-LU604_RS03930;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=LU604_RS03930;old_locus_tag=LU604_03930 NZ_CP089942.1 Protein Homology CDS 774143 776758 . + 0 ID=cds-WP_233479953.1;Parent=gene-LU604_RS03930;Dbxref=Genbank:WP_233479953.1;Name=WP_233479953.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014729902.1;locus_tag=LU604_RS03930;product=type VI secretion system ATPase TssH;protein_id=WP_233479953.1;transl_table=11 NZ_CP089942.1 RefSeq gene 776788 778173 . + . ID=gene-LU604_RS03935;Name=LU604_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03935;old_locus_tag=LU604_03935 NZ_CP089942.1 Protein Homology CDS 776788 778173 . + 0 ID=cds-WP_233479954.1;Parent=gene-LU604_RS03935;Dbxref=Genbank:WP_233479954.1;Name=WP_233479954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191086.1;locus_tag=LU604_RS03935;product=serine/threonine-protein kinase;protein_id=WP_233479954.1;transl_table=11 NZ_CP089942.1 RefSeq gene 778700 778966 . + . ID=gene-LU604_RS03940;Name=LU604_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03940;old_locus_tag=LU604_03940 NZ_CP089942.1 GeneMarkS-2+ CDS 778700 778966 . + 0 ID=cds-WP_233479955.1;Parent=gene-LU604_RS03940;Dbxref=Genbank:WP_233479955.1;Name=WP_233479955.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS03940;product=hypothetical protein;protein_id=WP_233479955.1;transl_table=11 NZ_CP089942.1 RefSeq gene 779627 780394 . + . ID=gene-LU604_RS03945;Name=LU604_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03945;old_locus_tag=LU604_03945 NZ_CP089942.1 GeneMarkS-2+ CDS 779627 780394 . + 0 ID=cds-WP_233479956.1;Parent=gene-LU604_RS03945;Dbxref=Genbank:WP_233479956.1;Name=WP_233479956.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS03945;product=hypothetical protein;protein_id=WP_233479956.1;transl_table=11 NZ_CP089942.1 RefSeq gene 781585 783516 . + . ID=gene-LU604_RS03950;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=LU604_RS03950;old_locus_tag=LU604_03950 NZ_CP089942.1 Protein Homology CDS 781585 783516 . + 0 ID=cds-WP_233479957.1;Parent=gene-LU604_RS03950;Dbxref=Genbank:WP_233479957.1;Name=WP_233479957.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssI;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200633.1;locus_tag=LU604_RS03950;product=type VI secretion system tip protein TssI/VgrG;protein_id=WP_233479957.1;transl_table=11 NZ_CP089942.1 RefSeq gene 783513 783944 . + . ID=gene-LU604_RS03955;Name=LU604_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03955;old_locus_tag=LU604_03955 NZ_CP089942.1 Protein Homology CDS 783513 783944 . + 0 ID=cds-WP_233479958.1;Parent=gene-LU604_RS03955;Dbxref=Genbank:WP_233479958.1;Name=WP_233479958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200634.1;locus_tag=LU604_RS03955;product=DcrB-related protein;protein_id=WP_233479958.1;transl_table=11 NZ_CP089942.1 RefSeq gene 783948 788042 . + . ID=gene-LU604_RS03960;Name=LU604_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03960;old_locus_tag=LU604_03960 NZ_CP089942.1 Protein Homology CDS 783948 788042 . + 0 ID=cds-WP_233479959.1;Parent=gene-LU604_RS03960;Dbxref=Genbank:WP_233479959.1;Name=WP_233479959.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040127.1;locus_tag=LU604_RS03960;product=DUF6531 domain-containing protein;protein_id=WP_233479959.1;transl_table=11 NZ_CP089942.1 RefSeq gene 788204 788485 . + . ID=gene-LU604_RS03965;Name=LU604_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03965;old_locus_tag=LU604_03965 NZ_CP089942.1 Protein Homology CDS 788204 788485 . + 0 ID=cds-WP_233479960.1;Parent=gene-LU604_RS03965;Dbxref=Genbank:WP_233479960.1;Name=WP_233479960.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025768.2;locus_tag=LU604_RS03965;product=HNH/ENDO VII family nuclease;protein_id=WP_233479960.1;transl_table=11 NZ_CP089942.1 RefSeq gene 788482 788913 . + . ID=gene-LU604_RS03970;Name=LU604_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03970;old_locus_tag=LU604_03970 NZ_CP089942.1 Protein Homology CDS 788482 788913 . + 0 ID=cds-WP_233479961.1;Parent=gene-LU604_RS03970;Dbxref=Genbank:WP_233479961.1;Name=WP_233479961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007853603.1;locus_tag=LU604_RS03970;product=SMI1/KNR4 family protein;protein_id=WP_233479961.1;transl_table=11 NZ_CP089942.1 RefSeq gene 789050 790090 . + . ID=gene-LU604_RS03975;Name=LU604_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03975;old_locus_tag=LU604_03975 NZ_CP089942.1 Protein Homology CDS 789050 790090 . + 0 ID=cds-WP_233478553.1-3;Parent=gene-LU604_RS03975;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS03975;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 790216 790527 . - . ID=gene-LU604_RS03980;Name=LU604_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03980;old_locus_tag=LU604_03980 NZ_CP089942.1 Protein Homology CDS 790216 790527 . - 0 ID=cds-WP_233479962.1;Parent=gene-LU604_RS03980;Dbxref=Genbank:WP_233479962.1;Name=WP_233479962.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000807557.1;locus_tag=LU604_RS03980;product=SymE family type I addiction module toxin;protein_id=WP_233479962.1;transl_table=11 NZ_CP089942.1 RefSeq gene 790600 791001 . - . ID=gene-LU604_RS03985;Name=LU604_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03985;old_locus_tag=LU604_03985 NZ_CP089942.1 Protein Homology CDS 790600 791001 . - 0 ID=cds-WP_233479963.1;Parent=gene-LU604_RS03985;Dbxref=Genbank:WP_233479963.1;Name=WP_233479963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095750.1;locus_tag=LU604_RS03985;product=helix-turn-helix transcriptional regulator;protein_id=WP_233479963.1;transl_table=11 NZ_CP089942.1 RefSeq gene 791099 793540 . + . ID=gene-LU604_RS03990;Name=LU604_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS03990;old_locus_tag=LU604_03990 NZ_CP089942.1 Protein Homology CDS 791099 793540 . + 0 ID=cds-WP_233481503.1;Parent=gene-LU604_RS03990;Dbxref=Genbank:WP_233481503.1;Name=WP_233481503.1;Ontology_term=GO:0006260,GO:0003677,GO:0003896,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA primase activity|0003896||IEA,zinc ion binding|0008270||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094921.1;locus_tag=LU604_RS03990;product=CHC2 zinc finger domain-containing protein;protein_id=WP_233481503.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 793590 794598 . + . ID=gene-LU604_RS03995;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=pseudogene;locus_tag=LU604_RS03995;old_locus_tag=LU604_03995;pseudo=true NZ_CP089942.1 Protein Homology CDS 793590 794598 . + 0 ID=cds-LU604_RS03995;Parent=gene-LU604_RS03995;Note=frameshifted;gbkey=CDS;gene=xerC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094903.1;locus_tag=LU604_RS03995;product=site-specific tyrosine recombinase XerC;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 794842 795177 . + . ID=gene-LU604_RS04000;Name=LU604_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04000;old_locus_tag=LU604_04000 NZ_CP089942.1 GeneMarkS-2+ CDS 794842 795177 . + 0 ID=cds-WP_233481504.1;Parent=gene-LU604_RS04000;Dbxref=Genbank:WP_233481504.1;Name=WP_233481504.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04000;product=hypothetical protein;protein_id=WP_233481504.1;transl_table=11 NZ_CP089942.1 RefSeq gene 795346 795726 . + . ID=gene-LU604_RS04005;Name=LU604_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04005;old_locus_tag=LU604_04005 NZ_CP089942.1 Protein Homology CDS 795346 795726 . + 0 ID=cds-WP_233481505.1;Parent=gene-LU604_RS04005;Dbxref=Genbank:WP_233481505.1;Name=WP_233481505.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025768.2;locus_tag=LU604_RS04005;product=HNH/ENDO VII family nuclease;protein_id=WP_233481505.1;transl_table=11 NZ_CP089942.1 RefSeq gene 795723 796154 . + . ID=gene-LU604_RS04010;Name=LU604_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04010;old_locus_tag=LU604_04010 NZ_CP089942.1 Protein Homology CDS 795723 796154 . + 0 ID=cds-WP_233479961.1-2;Parent=gene-LU604_RS04010;Dbxref=Genbank:WP_233479961.1;Name=WP_233479961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007853603.1;locus_tag=LU604_RS04010;product=SMI1/KNR4 family protein;protein_id=WP_233479961.1;transl_table=11 NZ_CP089942.1 RefSeq gene 796291 797331 . + . ID=gene-LU604_RS04015;Name=LU604_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04015;old_locus_tag=LU604_04015 NZ_CP089942.1 Protein Homology CDS 796291 797331 . + 0 ID=cds-WP_233478553.1-4;Parent=gene-LU604_RS04015;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS04015;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 797457 797768 . - . ID=gene-LU604_RS04020;Name=LU604_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04020;old_locus_tag=LU604_04020 NZ_CP089942.1 Protein Homology CDS 797457 797768 . - 0 ID=cds-WP_233479962.1-2;Parent=gene-LU604_RS04020;Dbxref=Genbank:WP_233479962.1;Name=WP_233479962.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000807557.1;locus_tag=LU604_RS04020;product=SymE family type I addiction module toxin;protein_id=WP_233479962.1;transl_table=11 NZ_CP089942.1 RefSeq gene 797841 798242 . - . ID=gene-LU604_RS04025;Name=LU604_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04025;old_locus_tag=LU604_04025 NZ_CP089942.1 Protein Homology CDS 797841 798242 . - 0 ID=cds-WP_233479963.1-2;Parent=gene-LU604_RS04025;Dbxref=Genbank:WP_233479963.1;Name=WP_233479963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095750.1;locus_tag=LU604_RS04025;product=helix-turn-helix transcriptional regulator;protein_id=WP_233479963.1;transl_table=11 NZ_CP089942.1 RefSeq gene 798340 801264 . + . ID=gene-LU604_RS04030;Name=LU604_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04030;old_locus_tag=LU604_04030 NZ_CP089942.1 Protein Homology CDS 798340 801264 . + 0 ID=cds-WP_233481506.1;Parent=gene-LU604_RS04030;Dbxref=Genbank:WP_233481506.1;Name=WP_233481506.1;Ontology_term=GO:0006260,GO:0003677,GO:0003896,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA primase activity|0003896||IEA,zinc ion binding|0008270||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094921.1;locus_tag=LU604_RS04030;product=CHC2 zinc finger domain-containing protein;protein_id=WP_233481506.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 801314 802085 . + . ID=gene-LU604_RS04035;Name=LU604_RS04035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04035;old_locus_tag=LU604_04035;pseudo=true NZ_CP089942.1 Protein Homology CDS 801314 802085 . + 0 ID=cds-LU604_RS04035;Parent=gene-LU604_RS04035;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094903.1;locus_tag=LU604_RS04035;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 802367 802822 . + . ID=gene-LU604_RS04040;Name=LU604_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04040;old_locus_tag=LU604_04040 NZ_CP089942.1 GeneMarkS-2+ CDS 802367 802822 . + 0 ID=cds-WP_233479966.1;Parent=gene-LU604_RS04040;Dbxref=Genbank:WP_233479966.1;Name=WP_233479966.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04040;product=hypothetical protein;protein_id=WP_233479966.1;transl_table=11 NZ_CP089942.1 RefSeq gene 802925 803053 . + . ID=gene-LU604_RS04045;Name=LU604_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04045;old_locus_tag=LU604_04045 NZ_CP089942.1 Protein Homology CDS 802925 803053 . + 0 ID=cds-WP_233480734.1;Parent=gene-LU604_RS04045;Dbxref=Genbank:WP_233480734.1;Name=WP_233480734.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=LU604_RS04045;product=hypothetical protein;protein_id=WP_233480734.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 803021 803155 . - . ID=gene-LU604_RS04050;Name=LU604_RS04050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04050;old_locus_tag=LU604_04050;partial=true;pseudo=true;start_range=.,803021 NZ_CP089942.1 Protein Homology CDS 803021 803155 . - 0 ID=cds-LU604_RS04050;Parent=gene-LU604_RS04050;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011920327.1;locus_tag=LU604_RS04050;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,803021;transl_table=11 NZ_CP089942.1 RefSeq gene 803245 803550 . + . ID=gene-LU604_RS04055;Name=LU604_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04055;old_locus_tag=LU604_04055 NZ_CP089942.1 Protein Homology CDS 803245 803550 . + 0 ID=cds-WP_233479967.1;Parent=gene-LU604_RS04055;Dbxref=Genbank:WP_233479967.1;Name=WP_233479967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025768.2;locus_tag=LU604_RS04055;product=HNH/ENDO VII family nuclease;protein_id=WP_233479967.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 803559 803980 . + . ID=gene-LU604_RS04060;Name=LU604_RS04060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04060;old_locus_tag=LU604_04060;pseudo=true NZ_CP089942.1 Protein Homology CDS 803559 803980 . + 0 ID=cds-LU604_RS04060;Parent=gene-LU604_RS04060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025918.2;locus_tag=LU604_RS04060;product=SMI1/KNR4 family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 804031 804921 . - . ID=gene-LU604_RS04065;Name=LU604_RS04065;end_range=804921,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04065;old_locus_tag=LU604_04065;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 804031 804921 . - 0 ID=cds-LU604_RS04065;Parent=gene-LU604_RS04065;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=804921,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011073373.1;locus_tag=LU604_RS04065;partial=true;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 804985 805170 . - . ID=gene-LU604_RS04070;Name=LU604_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04070;old_locus_tag=LU604_04070 NZ_CP089942.1 GeneMarkS-2+ CDS 804985 805170 . - 0 ID=cds-WP_233479968.1;Parent=gene-LU604_RS04070;Dbxref=Genbank:WP_233479968.1;Name=WP_233479968.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04070;product=BrnA antitoxin family protein;protein_id=WP_233479968.1;transl_table=11 NZ_CP089942.1 RefSeq gene 805174 805524 . - . ID=gene-LU604_RS04075;Name=LU604_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04075;old_locus_tag=LU604_04075 NZ_CP089942.1 Protein Homology CDS 805174 805524 . - 0 ID=cds-WP_016191104.1;Parent=gene-LU604_RS04075;Dbxref=Genbank:WP_016191104.1;Name=WP_016191104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000860148.1;locus_tag=LU604_RS04075;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_016191104.1;transl_table=11 NZ_CP089942.1 RefSeq gene 805529 805810 . - . ID=gene-LU604_RS04080;Name=LU604_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04080;old_locus_tag=LU604_04080 NZ_CP089942.1 Protein Homology CDS 805529 805810 . - 0 ID=cds-WP_233479969.1;Parent=gene-LU604_RS04080;Dbxref=Genbank:WP_233479969.1;Name=WP_233479969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191103.1;locus_tag=LU604_RS04080;product=DUF6516 family protein;protein_id=WP_233479969.1;transl_table=11 NZ_CP089942.1 RefSeq gene 806651 806962 . + . ID=gene-LU604_RS04085;Name=LU604_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04085;old_locus_tag=LU604_04085 NZ_CP089942.1 Protein Homology CDS 806651 806962 . + 0 ID=cds-WP_233479970.1;Parent=gene-LU604_RS04085;Dbxref=Genbank:WP_233479970.1;Name=WP_233479970.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02681.1;locus_tag=LU604_RS04085;product=Rha family transcriptional regulator;protein_id=WP_233479970.1;transl_table=11 NZ_CP089942.1 RefSeq gene 807266 808276 . - . ID=gene-LU604_RS04090;Name=LU604_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04090;old_locus_tag=LU604_04090 NZ_CP089942.1 Protein Homology CDS 807266 808276 . - 0 ID=cds-WP_233479971.1;Parent=gene-LU604_RS04090;Dbxref=Genbank:WP_233479971.1;Name=WP_233479971.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487120.1;locus_tag=LU604_RS04090;product=IS110 family transposase;protein_id=WP_233479971.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 808501 808617 . + . ID=gene-LU604_RS04095;Name=LU604_RS04095;end_range=808617,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04095;old_locus_tag=LU604_04095;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 808501 808617 . + 0 ID=cds-LU604_RS04095;Parent=gene-LU604_RS04095;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=808617,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015740894.1;locus_tag=LU604_RS04095;partial=true;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 808620 809783 . - . ID=gene-LU604_RS04100;Name=LU604_RS04100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04100;old_locus_tag=LU604_04100;pseudo=true NZ_CP089942.1 Protein Homology CDS 808620 809783 . - 0 ID=cds-LU604_RS04100;Parent=gene-LU604_RS04100;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611680.1;locus_tag=LU604_RS04100;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 809856 810053 . + . ID=gene-LU604_RS04105;Name=LU604_RS04105;end_range=810053,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04105;old_locus_tag=LU604_04105;partial=true;pseudo=true;start_range=.,809856 NZ_CP089942.1 Protein Homology CDS 809856 810053 . + 0 ID=cds-LU604_RS04105;Parent=gene-LU604_RS04105;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=810053,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104949.1;locus_tag=LU604_RS04105;partial=true;product=GntR family transcriptional regulator;pseudo=true;start_range=.,809856;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 810167 810607 . + . ID=gene-LU604_RS04110;Name=tnpA;end_range=810607,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS04110;old_locus_tag=LU604_04110;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 810167 810607 . + 0 ID=cds-LU604_RS04110;Parent=gene-LU604_RS04110;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=810607,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000525033.1;locus_tag=LU604_RS04110;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 810689 810967 . + . ID=gene-LU604_RS04115;Name=LU604_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04115;old_locus_tag=LU604_04115 NZ_CP089942.1 Protein Homology CDS 810689 810967 . + 0 ID=cds-WP_233480735.1;Parent=gene-LU604_RS04115;Dbxref=Genbank:WP_233480735.1;Name=WP_233480735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097100.1;locus_tag=LU604_RS04115;product=AlpA family phage regulatory protein;protein_id=WP_233480735.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 810988 811587 . + . ID=gene-LU604_RS04120;Name=LU604_RS04120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04120;old_locus_tag=LU604_04120;pseudo=true NZ_CP089942.1 Protein Homology CDS 810988 811587 . + 0 ID=cds-LU604_RS04120;Parent=gene-LU604_RS04120;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004857951.1;locus_tag=LU604_RS04120;product=Rha family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 811810 812849 . + . ID=gene-LU604_RS04125;Name=LU604_RS04125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04125;old_locus_tag=LU604_04125;pseudo=true NZ_CP089942.1 Protein Homology CDS 811810 812849 . + 0 ID=cds-LU604_RS04125;Parent=gene-LU604_RS04125;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS04125;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 813061 814195 . - . ID=gene-LU604_RS04130;Name=LU604_RS04130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04130;old_locus_tag=LU604_04130;pseudo=true NZ_CP089942.1 Protein Homology CDS 813061 814195 . - 0 ID=cds-LU604_RS04130;Parent=gene-LU604_RS04130;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS04130;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 814405 814755 . - . ID=gene-LU604_RS04135;Name=LU604_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04135;old_locus_tag=LU604_04135 NZ_CP089942.1 Protein Homology CDS 814405 814755 . - 0 ID=cds-WP_016192069.1;Parent=gene-LU604_RS04135;Dbxref=Genbank:WP_016192069.1;Name=WP_016192069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016537647.1;locus_tag=LU604_RS04135;product=hypothetical protein;protein_id=WP_016192069.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 814977 815746 . - . ID=gene-LU604_RS04140;Name=LU604_RS04140;end_range=815746,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04140;old_locus_tag=LU604_04140;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 814977 815746 . - 0 ID=cds-LU604_RS04140;Parent=gene-LU604_RS04140;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=815746,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=LU604_RS04140;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 815784 816287 . - . ID=gene-LU604_RS04145;Name=LU604_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04145;old_locus_tag=LU604_04145 NZ_CP089942.1 Protein Homology CDS 815784 816287 . - 0 ID=cds-WP_233479972.1;Parent=gene-LU604_RS04145;Dbxref=Genbank:WP_233479972.1;Name=WP_233479972.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU604_RS04145;product=IS1 family transposase;protein_id=WP_233479972.1;transl_table=11 NZ_CP089942.1 RefSeq gene 816206 816481 . - . ID=gene-LU604_RS04150;Name=LU604_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04150;old_locus_tag=LU604_04150 NZ_CP089942.1 Protein Homology CDS 816206 816481 . - 0 ID=cds-WP_233479973.1;Parent=gene-LU604_RS04150;Dbxref=Genbank:WP_233479973.1;Name=WP_233479973.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU604_RS04150;product=IS1-like element transposase;protein_id=WP_233479973.1;transl_table=11 NZ_CP089942.1 RefSeq gene 816609 817550 . + . ID=gene-LU604_RS04155;Name=LU604_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04155;old_locus_tag=LU604_04155 NZ_CP089942.1 Protein Homology CDS 816609 817550 . + 0 ID=cds-WP_233479974.1;Parent=gene-LU604_RS04155;Dbxref=Genbank:WP_233479974.1;Name=WP_233479974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480477.1;locus_tag=LU604_RS04155;product=hypothetical protein;protein_id=WP_233479974.1;transl_table=11 NZ_CP089942.1 RefSeq gene 817674 818495 . + . ID=gene-LU604_RS04160;Name=LU604_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04160;old_locus_tag=LU604_04160 NZ_CP089942.1 Protein Homology CDS 817674 818495 . + 0 ID=cds-WP_233479975.1;Parent=gene-LU604_RS04160;Dbxref=Genbank:WP_233479975.1;Name=WP_233479975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001546956.1;locus_tag=LU604_RS04160;product=DUF932 domain-containing protein;protein_id=WP_233479975.1;transl_table=11 NZ_CP089942.1 RefSeq gene 818533 819012 . + . ID=gene-LU604_RS04165;Name=LU604_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04165;old_locus_tag=LU604_04165 NZ_CP089942.1 Protein Homology CDS 818533 819012 . + 0 ID=cds-WP_233480736.1;Parent=gene-LU604_RS04165;Dbxref=Genbank:WP_233480736.1;Name=WP_233480736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120560.1;locus_tag=LU604_RS04165;product=antirestriction protein;protein_id=WP_233480736.1;transl_table=11 NZ_CP089942.1 RefSeq gene 819024 819503 . + . ID=gene-LU604_RS04170;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=LU604_RS04170;old_locus_tag=LU604_04170 NZ_CP089942.1 Protein Homology CDS 819024 819503 . + 0 ID=cds-WP_233479976.1;Parent=gene-LU604_RS04170;Dbxref=Genbank:WP_233479976.1;Name=WP_233479976.1;Ontology_term=GO:0006281;gbkey=CDS;gene=radC;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004109365.1;locus_tag=LU604_RS04170;product=DNA repair protein RadC;protein_id=WP_233479976.1;transl_table=11 NZ_CP089942.1 RefSeq gene 819516 819737 . + . ID=gene-LU604_RS04175;Name=LU604_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04175;old_locus_tag=LU604_04175 NZ_CP089942.1 Protein Homology CDS 819516 819737 . + 0 ID=cds-WP_233480737.1;Parent=gene-LU604_RS04175;Dbxref=Genbank:WP_233480737.1;Name=WP_233480737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588435.1;locus_tag=LU604_RS04175;product=DUF987 domain-containing protein;protein_id=WP_233480737.1;transl_table=11 NZ_CP089942.1 RefSeq gene 819760 820119 . + . ID=gene-LU604_RS04180;Name=LU604_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04180;old_locus_tag=LU604_04180 NZ_CP089942.1 Protein Homology CDS 819760 820119 . + 0 ID=cds-WP_233479977.1;Parent=gene-LU604_RS04180;Dbxref=Genbank:WP_233479977.1;Name=WP_233479977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004856821.1;locus_tag=LU604_RS04180;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_233479977.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 820172 820348 . + . ID=gene-LU604_RS04185;Name=LU604_RS04185;end_range=820348,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04185;old_locus_tag=LU604_04185;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 820172 820348 . + 0 ID=cds-LU604_RS04185;Parent=gene-LU604_RS04185;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=820348,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000854672.1;locus_tag=LU604_RS04185;partial=true;product=TA system toxin CbtA family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 820342 820653 . - . ID=gene-LU604_RS04190;Name=LU604_RS04190;end_range=820653,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04190;old_locus_tag=LU604_04190;partial=true;pseudo=true;start_range=.,820342 NZ_CP089942.1 Protein Homology CDS 820342 820653 . - 0 ID=cds-LU604_RS04190;Parent=gene-LU604_RS04190;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=820653,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001394637.1;locus_tag=LU604_RS04190;partial=true;product=terminase family protein;pseudo=true;start_range=.,820342;transl_table=11 NZ_CP089942.1 RefSeq gene 820885 822414 . + . ID=gene-LU604_RS04195;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=LU604_RS04195;old_locus_tag=LU604_04195 NZ_CP089942.1 Protein Homology CDS 820885 822414 . + 0 ID=cds-WP_233479978.1;Parent=gene-LU604_RS04195;Dbxref=Genbank:WP_233479978.1;Name=WP_233479978.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001907982.1;locus_tag=LU604_RS04195;product=IS21 family transposase;protein_id=WP_233479978.1;transl_table=11 NZ_CP089942.1 RefSeq gene 822425 823168 . + . ID=gene-LU604_RS04200;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=LU604_RS04200;old_locus_tag=LU604_04200 NZ_CP089942.1 Protein Homology CDS 822425 823168 . + 0 ID=cds-WP_233479979.1;Parent=gene-LU604_RS04200;Dbxref=Genbank:WP_233479979.1;Name=WP_233479979.1;Ontology_term=GO:0005524;gbkey=CDS;gene=istB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802959.1;locus_tag=LU604_RS04200;product=IS21-like element helper ATPase IstB;protein_id=WP_233479979.1;transl_table=11 NZ_CP089942.1 RefSeq gene 823723 825441 . + . ID=gene-LU604_RS04205;Name=LU604_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04205;old_locus_tag=LU604_04205 NZ_CP089942.1 Protein Homology CDS 823723 825441 . + 0 ID=cds-WP_233479980.1;Parent=gene-LU604_RS04205;Dbxref=Genbank:WP_233479980.1;Name=WP_233479980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192018.1;locus_tag=LU604_RS04205;product=polysaccharide lyase family protein;protein_id=WP_233479980.1;transl_table=11 NZ_CP089942.1 RefSeq gene 825659 826402 . + . ID=gene-LU604_RS04210;Name=LU604_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04210;old_locus_tag=LU604_04210 NZ_CP089942.1 Protein Homology CDS 825659 826402 . + 0 ID=cds-WP_016192019.1;Parent=gene-LU604_RS04210;Dbxref=Genbank:WP_016192019.1;Name=WP_016192019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010256466.1;locus_tag=LU604_RS04210;product=KdgM family transporter;protein_id=WP_016192019.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 826748 827263 . - . ID=gene-LU604_RS04215;Name=LU604_RS04215;end_range=827263,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04215;old_locus_tag=LU604_04215;partial=true;pseudo=true;start_range=.,826748 NZ_CP089942.1 Protein Homology CDS 826748 827263 . - 0 ID=cds-LU604_RS04215;Parent=gene-LU604_RS04215;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=827263,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007755838.1;locus_tag=LU604_RS04215;partial=true;product=2-isopropylmalate synthase;pseudo=true;start_range=.,826748;transl_table=11 NZ_CP089942.1 RefSeq gene 827762 828301 . - . ID=gene-LU604_RS04220;Name=LU604_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04220;old_locus_tag=LU604_04220 NZ_CP089942.1 Protein Homology CDS 827762 828301 . - 0 ID=cds-WP_233479981.1;Parent=gene-LU604_RS04220;Dbxref=Genbank:WP_233479981.1;Name=WP_233479981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192021.1;locus_tag=LU604_RS04220;product=ankyrin repeat domain-containing protein;protein_id=WP_233479981.1;transl_table=11 NZ_CP089942.1 RefSeq gene 828363 829829 . - . ID=gene-LU604_RS04225;Name=katB;gbkey=Gene;gene=katB;gene_biotype=protein_coding;locus_tag=LU604_RS04225;old_locus_tag=LU604_04225 NZ_CP089942.1 Protein Homology CDS 828363 829829 . - 0 ID=cds-WP_198292540.1;Parent=gene-LU604_RS04225;Dbxref=Genbank:WP_198292540.1;Name=WP_198292540.1;gbkey=CDS;gene=katB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008109957.1;locus_tag=LU604_RS04225;product=catalase KatB;protein_id=WP_198292540.1;transl_table=11 NZ_CP089942.1 RefSeq gene 830192 830356 . + . ID=gene-LU604_RS04230;Name=LU604_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04230;old_locus_tag=LU604_04230 NZ_CP089942.1 GeneMarkS-2+ CDS 830192 830356 . + 0 ID=cds-WP_233479982.1;Parent=gene-LU604_RS04230;Dbxref=Genbank:WP_233479982.1;Name=WP_233479982.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04230;product=hypothetical protein;protein_id=WP_233479982.1;transl_table=11 NZ_CP089942.1 RefSeq gene 830707 831189 . - . ID=gene-LU604_RS04235;Name=LU604_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04235;old_locus_tag=LU604_04235 NZ_CP089942.1 Protein Homology CDS 830707 831189 . - 0 ID=cds-WP_233479983.1;Parent=gene-LU604_RS04235;Dbxref=Genbank:WP_233479983.1;Name=WP_233479983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192024.1;locus_tag=LU604_RS04235;product=transglycosylase SLT domain-containing protein;protein_id=WP_233479983.1;transl_table=11 NZ_CP089942.1 RefSeq gene 832390 833748 . + . ID=gene-LU604_RS04240;Name=LU604_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04240;old_locus_tag=LU604_04240 NZ_CP089942.1 GeneMarkS-2+ CDS 832390 833748 . + 0 ID=cds-WP_233479984.1;Parent=gene-LU604_RS04240;Dbxref=Genbank:WP_233479984.1;Name=WP_233479984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04240;product=hypothetical protein;protein_id=WP_233479984.1;transl_table=11 NZ_CP089942.1 RefSeq gene 834690 835202 . + . ID=gene-LU604_RS04245;Name=LU604_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04245;old_locus_tag=LU604_04245 NZ_CP089942.1 Protein Homology CDS 834690 835202 . + 0 ID=cds-WP_016192027.1;Parent=gene-LU604_RS04245;Dbxref=Genbank:WP_016192027.1;Name=WP_016192027.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF014376.2;locus_tag=LU604_RS04245;product=AraC family ligand binding domain-containing protein;protein_id=WP_016192027.1;transl_table=11 NZ_CP089942.1 RefSeq gene 835785 836042 . + . ID=gene-LU604_RS04250;Name=LU604_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04250;old_locus_tag=LU604_04250 NZ_CP089942.1 GeneMarkS-2+ CDS 835785 836042 . + 0 ID=cds-WP_233481507.1;Parent=gene-LU604_RS04250;Dbxref=Genbank:WP_233481507.1;Name=WP_233481507.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04250;product=hypothetical protein;protein_id=WP_233481507.1;transl_table=11 NZ_CP089942.1 RefSeq gene 836067 836411 . + . ID=gene-LU604_RS04255;Name=LU604_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04255;old_locus_tag=LU604_04255 NZ_CP089942.1 Protein Homology CDS 836067 836411 . + 0 ID=cds-WP_233479985.1;Parent=gene-LU604_RS04255;Dbxref=Genbank:WP_233479985.1;Name=WP_233479985.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021527.2;locus_tag=LU604_RS04255;product=2OG-Fe dioxygenase family protein;protein_id=WP_233479985.1;transl_table=11 NZ_CP089942.1 RefSeq gene 836572 837462 . + . ID=gene-LU604_RS04260;Name=LU604_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04260;old_locus_tag=LU604_04260 NZ_CP089942.1 Protein Homology CDS 836572 837462 . + 0 ID=cds-WP_046372039.1;Parent=gene-LU604_RS04260;Dbxref=Genbank:WP_046372039.1;Name=WP_046372039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667897.1;locus_tag=LU604_RS04260;product=lysine exporter LysO family protein;protein_id=WP_046372039.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 837537 838327 . - . ID=gene-LU604_RS04265;Name=LU604_RS04265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04265;old_locus_tag=LU604_04265;pseudo=true NZ_CP089942.1 Protein Homology CDS 837537 838327 . - 0 ID=cds-LU604_RS04265;Parent=gene-LU604_RS04265;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS04265;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 839215 840027 . - . ID=gene-LU604_RS04270;Name=LU604_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04270;old_locus_tag=LU604_04270 NZ_CP089942.1 Protein Homology CDS 839215 840027 . - 0 ID=cds-WP_233479986.1;Parent=gene-LU604_RS04270;Dbxref=Genbank:WP_233479986.1;Name=WP_233479986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192032.1;locus_tag=LU604_RS04270;product=IclR family transcriptional regulator;protein_id=WP_233479986.1;transl_table=11 NZ_CP089942.1 RefSeq gene 840352 841878 . + . ID=gene-LU604_RS04275;Name=LU604_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04275;old_locus_tag=LU604_04275 NZ_CP089942.1 Protein Homology CDS 840352 841878 . + 0 ID=cds-WP_016192033.1;Parent=gene-LU604_RS04275;Dbxref=Genbank:WP_016192033.1;Name=WP_016192033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024269.1;locus_tag=LU604_RS04275;product=sugar ABC transporter ATP-binding protein;protein_id=WP_016192033.1;transl_table=11 NZ_CP089942.1 RefSeq gene 841919 843019 . + . ID=gene-LU604_RS04280;Name=LU604_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04280;old_locus_tag=LU604_04280 NZ_CP089942.1 Protein Homology CDS 841919 843019 . + 0 ID=cds-WP_233479987.1;Parent=gene-LU604_RS04280;Dbxref=Genbank:WP_233479987.1;Name=WP_233479987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024268.1;locus_tag=LU604_RS04280;product=ABC transporter permease;protein_id=WP_233479987.1;transl_table=11 NZ_CP089942.1 RefSeq gene 843016 844116 . + . ID=gene-LU604_RS04285;Name=LU604_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04285;old_locus_tag=LU604_04285 NZ_CP089942.1 Protein Homology CDS 843016 844116 . + 0 ID=cds-WP_016192035.1;Parent=gene-LU604_RS04285;Dbxref=Genbank:WP_016192035.1;Name=WP_016192035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015841819.1;locus_tag=LU604_RS04285;product=substrate-binding domain-containing protein;protein_id=WP_016192035.1;transl_table=11 NZ_CP089942.1 RefSeq gene 844127 844978 . + . ID=gene-LU604_RS04290;Name=LU604_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04290;old_locus_tag=LU604_04290 NZ_CP089942.1 Protein Homology CDS 844127 844978 . + 0 ID=cds-WP_233479988.1;Parent=gene-LU604_RS04290;Dbxref=Genbank:WP_233479988.1;Name=WP_233479988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192036.1;locus_tag=LU604_RS04290;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_233479988.1;transl_table=11 NZ_CP089942.1 RefSeq gene 845295 846293 . + . ID=gene-LU604_RS04295;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=LU604_RS04295;old_locus_tag=LU604_04295 NZ_CP089942.1 Protein Homology CDS 845295 846293 . + 0 ID=cds-WP_016192037.1;Parent=gene-LU604_RS04295;Dbxref=Genbank:WP_016192037.1;Name=WP_016192037.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006327774.1;locus_tag=LU604_RS04295;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_016192037.1;transl_table=11 NZ_CP089942.1 RefSeq gene 846307 846774 . + . ID=gene-LU604_RS04300;Name=LU604_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04300;old_locus_tag=LU604_04300 NZ_CP089942.1 Protein Homology CDS 846307 846774 . + 0 ID=cds-WP_233479989.1;Parent=gene-LU604_RS04300;Dbxref=Genbank:WP_233479989.1;Name=WP_233479989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192038.1;locus_tag=LU604_RS04300;product=YhcH/YjgK/YiaL family protein;protein_id=WP_233479989.1;transl_table=11 NZ_CP089942.1 RefSeq gene 846789 848087 . + . ID=gene-LU604_RS04305;Name=LU604_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04305;old_locus_tag=LU604_04305 NZ_CP089942.1 Protein Homology CDS 846789 848087 . + 0 ID=cds-WP_046372041.1;Parent=gene-LU604_RS04305;Dbxref=Genbank:WP_046372041.1;Name=WP_046372041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146637.1;locus_tag=LU604_RS04305;product=MFS transporter;protein_id=WP_046372041.1;transl_table=11 NZ_CP089942.1 RefSeq gene 848084 849568 . + . ID=gene-LU604_RS04310;Name=LU604_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04310;old_locus_tag=LU604_04310 NZ_CP089942.1 Protein Homology CDS 848084 849568 . + 0 ID=cds-WP_233479990.1;Parent=gene-LU604_RS04310;Dbxref=Genbank:WP_233479990.1;Name=WP_233479990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192041.1;locus_tag=LU604_RS04310;product=carbohydrate kinase;protein_id=WP_233479990.1;transl_table=11 NZ_CP089942.1 RefSeq gene 849565 850227 . + . ID=gene-LU604_RS04315;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=LU604_RS04315;old_locus_tag=LU604_04315 NZ_CP089942.1 Protein Homology CDS 849565 850227 . + 0 ID=cds-WP_016192042.1;Parent=gene-LU604_RS04315;Dbxref=Genbank:WP_016192042.1;Name=WP_016192042.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004952553.1;locus_tag=LU604_RS04315;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_016192042.1;transl_table=11 NZ_CP089942.1 RefSeq gene 850230 851087 . + . ID=gene-LU604_RS04320;Name=LU604_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04320;old_locus_tag=LU604_04320 NZ_CP089942.1 Protein Homology CDS 850230 851087 . + 0 ID=cds-WP_233479991.1;Parent=gene-LU604_RS04320;Dbxref=Genbank:WP_233479991.1;Name=WP_233479991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192043.1;locus_tag=LU604_RS04320;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_233479991.1;transl_table=11 NZ_CP089942.1 RefSeq gene 851084 851782 . + . ID=gene-LU604_RS04325;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=LU604_RS04325;old_locus_tag=LU604_04325 NZ_CP089942.1 Protein Homology CDS 851084 851782 . + 0 ID=cds-WP_016192044.1;Parent=gene-LU604_RS04325;Dbxref=Genbank:WP_016192044.1;Name=WP_016192044.1;Ontology_term=GO:0019568,GO:0008742;gbkey=CDS;gene=araD;go_function=L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105629.1;locus_tag=LU604_RS04325;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_016192044.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 851872 852688 . - . ID=gene-LU604_RS04330;Name=LU604_RS04330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04330;old_locus_tag=LU604_04330;pseudo=true NZ_CP089942.1 Protein Homology CDS 851872 852688 . - 0 ID=cds-LU604_RS04330;Parent=gene-LU604_RS04330;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS04330;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 853271 854110 . + . ID=gene-LU604_RS04335;Name=LU604_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04335;old_locus_tag=LU604_04335 NZ_CP089942.1 Protein Homology CDS 853271 854110 . + 0 ID=cds-WP_016192047.1;Parent=gene-LU604_RS04335;Dbxref=Genbank:WP_016192047.1;Name=WP_016192047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011988487.1;locus_tag=LU604_RS04335;product=hypothetical protein;protein_id=WP_016192047.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 854298 854435 . - . ID=gene-LU604_RS04340;Name=LU604_RS04340;end_range=854435,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04340;old_locus_tag=LU604_04340;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 854298 854435 . - 0 ID=cds-LU604_RS04340;Parent=gene-LU604_RS04340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=854435,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS04340;partial=true;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 854480 854725 . - . ID=gene-LU604_RS04345;Name=LU604_RS04345;end_range=854725,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04345;old_locus_tag=LU604_04345;partial=true;pseudo=true;start_range=.,854480 NZ_CP089942.1 Protein Homology CDS 854480 854725 . - 0 ID=cds-LU604_RS04345;Parent=gene-LU604_RS04345;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=854725,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611456.1;locus_tag=LU604_RS04345;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,854480;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 854717 855118 . + . ID=gene-LU604_RS04350;Name=LU604_RS04350;end_range=855118,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04350;old_locus_tag=LU604_04350;partial=true;pseudo=true;start_range=.,854717 NZ_CP089942.1 Protein Homology CDS 854717 855118 . + 0 ID=cds-LU604_RS04350;Parent=gene-LU604_RS04350;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=855118,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542083.1;locus_tag=LU604_RS04350;partial=true;product=DNA primase;pseudo=true;start_range=.,854717;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 855979 857143 . - . ID=gene-LU604_RS04355;Name=LU604_RS04355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04355;old_locus_tag=LU604_04355;pseudo=true NZ_CP089942.1 Protein Homology CDS 855979 857143 . - 0 ID=cds-LU604_RS04355;Parent=gene-LU604_RS04355;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611680.1;locus_tag=LU604_RS04355;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 857639 857857 . + . ID=gene-LU604_RS04360;Name=LU604_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04360;old_locus_tag=LU604_04360 NZ_CP089942.1 GeneMarkS-2+ CDS 857639 857857 . + 0 ID=cds-WP_233479992.1;Parent=gene-LU604_RS04360;Dbxref=Genbank:WP_233479992.1;Name=WP_233479992.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04360;product=hypothetical protein;protein_id=WP_233479992.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 858425 858937 . + . ID=gene-LU604_RS04365;Name=LU604_RS04365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04365;old_locus_tag=LU604_04365;partial=true;pseudo=true;start_range=.,858425 NZ_CP089942.1 Protein Homology CDS 858425 858937 . + 0 ID=cds-LU604_RS04365;Parent=gene-LU604_RS04365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839077.1;locus_tag=LU604_RS04365;partial=true;product=type VI secretion system baseplate subunit TssG;pseudo=true;start_range=.,858425;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 858918 859455 . + . ID=gene-LU604_RS04370;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=pseudogene;locus_tag=LU604_RS04370;old_locus_tag=LU604_04370;pseudo=true NZ_CP089942.1 Protein Homology CDS 858918 859455 . + 0 ID=cds-LU604_RS04370;Parent=gene-LU604_RS04370;Note=frameshifted;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230185.1;locus_tag=LU604_RS04370;product=type VI secretion system lipoprotein TssJ;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 859455 859909 . + . ID=gene-LU604_RS04375;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=pseudogene;locus_tag=LU604_RS04375;old_locus_tag=LU604_04375;pseudo=true NZ_CP089942.1 Protein Homology CDS 859455 859909 . + 0 ID=cds-LU604_RS04375;Parent=gene-LU604_RS04375;Note=frameshifted;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850246.1;locus_tag=LU604_RS04375;product=type VI secretion system baseplate subunit TssE;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 859924 860381 . + . ID=gene-LU604_RS04380;Name=LU604_RS04380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04380;old_locus_tag=LU604_04380;pseudo=true NZ_CP089942.1 Protein Homology CDS 859924 860381 . + 0 ID=cds-LU604_RS04380;Parent=gene-LU604_RS04380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439661.1;locus_tag=LU604_RS04380;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 861055 861156 . + . ID=gene-LU604_RS04385;Name=LU604_RS04385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04385;old_locus_tag=LU604_04385;partial=true;pseudo=true;start_range=.,861055 NZ_CP089942.1 Protein Homology CDS 861055 861156 . + 0 ID=cds-LU604_RS04385;Parent=gene-LU604_RS04385;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848924.1;locus_tag=LU604_RS04385;partial=true;product=universal stress protein;pseudo=true;start_range=.,861055;transl_table=11 NZ_CP089942.1 RefSeq gene 861204 861632 . + . ID=gene-LU604_RS04390;Name=LU604_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04390;old_locus_tag=LU604_04390 NZ_CP089942.1 GeneMarkS-2+ CDS 861204 861632 . + 0 ID=cds-WP_233479993.1;Parent=gene-LU604_RS04390;Dbxref=Genbank:WP_233479993.1;Name=WP_233479993.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04390;product=hypothetical protein;protein_id=WP_233479993.1;transl_table=11 NZ_CP089942.1 RefSeq gene 861876 862016 . + . ID=gene-LU604_RS04395;Name=LU604_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04395;old_locus_tag=LU604_04395 NZ_CP089942.1 GeneMarkS-2+ CDS 861876 862016 . + 0 ID=cds-WP_233479994.1;Parent=gene-LU604_RS04395;Dbxref=Genbank:WP_233479994.1;Name=WP_233479994.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04395;product=hypothetical protein;protein_id=WP_233479994.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 862463 862792 . + . ID=gene-LU604_RS04400;Name=LU604_RS04400;end_range=862792,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04400;old_locus_tag=LU604_04400;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 862463 862792 . + 0 ID=cds-LU604_RS04400;Parent=gene-LU604_RS04400;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=862792,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU604_RS04400;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 862782 863313 . - . ID=gene-LU604_RS04405;Name=LU604_RS04405;end_range=863313,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04405;old_locus_tag=LU604_04405;partial=true;pseudo=true;start_range=.,862782 NZ_CP089942.1 Protein Homology CDS 862782 863313 . - 0 ID=cds-LU604_RS04405;Parent=gene-LU604_RS04405;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=863313,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007769201.1;locus_tag=LU604_RS04405;partial=true;product=VRR-NUC domain-containing protein;pseudo=true;start_range=.,862782;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 863334 863435 . - . ID=gene-LU604_RS04410;Name=LU604_RS04410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04410;old_locus_tag=LU604_04410;partial=true;pseudo=true;start_range=.,863334 NZ_CP089942.1 Protein Homology CDS 863334 863435 . - 0 ID=cds-LU604_RS04410;Parent=gene-LU604_RS04410;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS04410;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,863334;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 864044 864274 . + . ID=gene-LU604_RS04415;Name=LU604_RS04415;end_range=864274,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04415;old_locus_tag=LU604_04415;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 864044 864274 . + 0 ID=cds-LU604_RS04415;Parent=gene-LU604_RS04415;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=864274,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168499.1;locus_tag=LU604_RS04415;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 864415 865638 . - . ID=gene-LU604_RS04420;Name=LU604_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04420;old_locus_tag=LU604_04420 NZ_CP089942.1 Protein Homology CDS 864415 865638 . - 0 ID=cds-WP_233479995.1;Parent=gene-LU604_RS04420;Dbxref=Genbank:WP_233479995.1;Name=WP_233479995.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU604_RS04420;product=IS91 family transposase;protein_id=WP_233479995.1;transl_table=11 NZ_CP089942.1 RefSeq gene 865702 866259 . - . ID=gene-LU604_RS04425;Name=LU604_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04425;old_locus_tag=LU604_04425 NZ_CP089942.1 Protein Homology CDS 865702 866259 . - 0 ID=cds-WP_233479996.1;Parent=gene-LU604_RS04425;Dbxref=Genbank:WP_233479996.1;Name=WP_233479996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455304.1;locus_tag=LU604_RS04425;product=DUF2913 family protein;protein_id=WP_233479996.1;transl_table=11 NZ_CP089942.1 RefSeq gene 867061 867504 . - . ID=gene-LU604_RS04430;Name=LU604_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04430;old_locus_tag=LU604_04430 NZ_CP089942.1 GeneMarkS-2+ CDS 867061 867504 . - 0 ID=cds-WP_233479997.1;Parent=gene-LU604_RS04430;Dbxref=Genbank:WP_233479997.1;Name=WP_233479997.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04430;product=hypothetical protein;protein_id=WP_233479997.1;transl_table=11 NZ_CP089942.1 RefSeq gene 867498 868112 . - . ID=gene-LU604_RS04435;Name=LU604_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04435;old_locus_tag=LU604_04435 NZ_CP089942.1 Protein Homology CDS 867498 868112 . - 0 ID=cds-WP_233479998.1;Parent=gene-LU604_RS04435;Dbxref=Genbank:WP_233479998.1;Name=WP_233479998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189488.1;locus_tag=LU604_RS04435;product=peptidoglycan recognition family protein;protein_id=WP_233479998.1;transl_table=11 NZ_CP089942.1 RefSeq gene 868140 868622 . - . ID=gene-LU604_RS04440;Name=LU604_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04440;old_locus_tag=LU604_04440 NZ_CP089942.1 Protein Homology CDS 868140 868622 . - 0 ID=cds-WP_233479999.1;Parent=gene-LU604_RS04440;Dbxref=Genbank:WP_233479999.1;Name=WP_233479999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750982.1;locus_tag=LU604_RS04440;product=type VI secretion system tube protein Hcp;protein_id=WP_233479999.1;transl_table=11 NZ_CP089942.1 RefSeq gene 868650 869231 . - . ID=gene-LU604_RS04445;Name=LU604_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04445;old_locus_tag=LU604_04445 NZ_CP089942.1 Protein Homology CDS 868650 869231 . - 0 ID=cds-WP_233480000.1;Parent=gene-LU604_RS04445;Dbxref=Genbank:WP_233480000.1;Name=WP_233480000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006706936.1;locus_tag=LU604_RS04445;product=recombinase family protein;protein_id=WP_233480000.1;transl_table=11 NZ_CP089942.1 RefSeq gene 869382 869654 . + . ID=gene-LU604_RS04450;Name=LU604_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04450;old_locus_tag=LU604_04450 NZ_CP089942.1 Protein Homology CDS 869382 869654 . + 0 ID=cds-WP_233480001.1;Parent=gene-LU604_RS04450;Dbxref=Genbank:WP_233480001.1;Name=WP_233480001.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025079.2;locus_tag=LU604_RS04450;product=DUF4158 domain-containing protein;protein_id=WP_233480001.1;transl_table=11 NZ_CP089942.1 RefSeq gene 869699 872209 . - . ID=gene-LU604_RS04455;Name=LU604_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04455;old_locus_tag=LU604_04455 NZ_CP089942.1 Protein Homology CDS 869699 872209 . - 0 ID=cds-WP_233480002.1;Parent=gene-LU604_RS04455;Dbxref=Genbank:WP_233480002.1;Name=WP_233480002.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013676.2;locus_tag=LU604_RS04455;product=Tn3 family transposase;protein_id=WP_233480002.1;transl_table=11 NZ_CP089942.1 RefSeq gene 872240 873463 . + . ID=gene-LU604_RS04460;Name=LU604_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04460;old_locus_tag=LU604_04460 NZ_CP089942.1 Protein Homology CDS 872240 873463 . + 0 ID=cds-WP_233478977.1-2;Parent=gene-LU604_RS04460;Dbxref=Genbank:WP_233478977.1;Name=WP_233478977.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU604_RS04460;product=IS91 family transposase;protein_id=WP_233478977.1;transl_table=11 NZ_CP089942.1 RefSeq gene 873605 873739 . - . ID=gene-LU604_RS26885;Name=LU604_RS26885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26885 NZ_CP089942.1 GeneMarkS-2+ CDS 873605 873739 . - 0 ID=cds-WP_256371726.1;Parent=gene-LU604_RS26885;Dbxref=Genbank:WP_256371726.1;Name=WP_256371726.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26885;product=hypothetical protein;protein_id=WP_256371726.1;transl_table=11 NZ_CP089942.1 RefSeq gene 874279 874635 . - . ID=gene-LU604_RS04465;Name=LU604_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04465;old_locus_tag=LU604_04465 NZ_CP089942.1 Protein Homology CDS 874279 874635 . - 0 ID=cds-WP_233480004.1;Parent=gene-LU604_RS04465;Dbxref=Genbank:WP_233480004.1;Name=WP_233480004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000127484.1;locus_tag=LU604_RS04465;product=DNA-binding protein;protein_id=WP_233480004.1;transl_table=11 NZ_CP089942.1 RefSeq gene 874632 874967 . - . ID=gene-LU604_RS04470;Name=LU604_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04470;old_locus_tag=LU604_04470 NZ_CP089942.1 Protein Homology CDS 874632 874967 . - 0 ID=cds-WP_046372428.1;Parent=gene-LU604_RS04470;Dbxref=Genbank:WP_046372428.1;Name=WP_046372428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026069.1;locus_tag=LU604_RS04470;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_046372428.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 875183 875815 . + . ID=gene-LU604_RS04475;Name=LU604_RS04475;end_range=875815,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04475;old_locus_tag=LU604_04475;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 875183 875815 . + 0 ID=cds-LU604_RS04475;Parent=gene-LU604_RS04475;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=875815,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549893.1;locus_tag=LU604_RS04475;partial=true;product=recombinase family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 877094 878134 . + . ID=gene-LU604_RS04480;Name=LU604_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04480;old_locus_tag=LU604_04480 NZ_CP089942.1 Protein Homology CDS 877094 878134 . + 0 ID=cds-WP_233478553.1-5;Parent=gene-LU604_RS04480;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS04480;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 878200 878460 . - . ID=gene-LU604_RS04485;Name=LU604_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04485;old_locus_tag=LU604_04485 NZ_CP089942.1 Protein Homology CDS 878200 878460 . - 0 ID=cds-WP_233480005.1;Parent=gene-LU604_RS04485;Dbxref=Genbank:WP_233480005.1;Name=WP_233480005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193173.1;locus_tag=LU604_RS04485;product=hypothetical protein;protein_id=WP_233480005.1;transl_table=11 NZ_CP089942.1 RefSeq gene 878571 879389 . - . ID=gene-LU604_RS04490;Name=LU604_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04490;old_locus_tag=LU604_04490 NZ_CP089942.1 Protein Homology CDS 878571 879389 . - 0 ID=cds-WP_233480006.1;Parent=gene-LU604_RS04490;Dbxref=Genbank:WP_233480006.1;Name=WP_233480006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000196235.1;locus_tag=LU604_RS04490;product=SprT-like domain-containing protein;protein_id=WP_233480006.1;transl_table=11 NZ_CP089942.1 RefSeq gene 879392 879625 . - . ID=gene-LU604_RS04495;Name=LU604_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04495;old_locus_tag=LU604_04495 NZ_CP089942.1 Protein Homology CDS 879392 879625 . - 0 ID=cds-WP_044715201.1;Parent=gene-LU604_RS04495;Dbxref=Genbank:WP_044715201.1;Name=WP_044715201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196202.1;locus_tag=LU604_RS04495;product=antirestriction protein ArdR;protein_id=WP_044715201.1;transl_table=11 NZ_CP089942.1 RefSeq gene 879835 880293 . - . ID=gene-LU604_RS04500;Name=LU604_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04500;old_locus_tag=LU604_04500 NZ_CP089942.1 Protein Homology CDS 879835 880293 . - 0 ID=cds-WP_233480738.1;Parent=gene-LU604_RS04500;Dbxref=Genbank:WP_233480738.1;Name=WP_233480738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001371843.1;locus_tag=LU604_RS04500;product=hypothetical protein;protein_id=WP_233480738.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 880270 880386 . - . ID=gene-LU604_RS04505;Name=LU604_RS04505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04505;old_locus_tag=LU604_04505;partial=true;pseudo=true;start_range=.,880270 NZ_CP089942.1 Protein Homology CDS 880270 880386 . - 0 ID=cds-LU604_RS04505;Parent=gene-LU604_RS04505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS04505;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,880270;transl_table=11 NZ_CP089942.1 RefSeq gene 880779 881678 . - . ID=gene-LU604_RS04510;Name=LU604_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04510;old_locus_tag=LU604_04510 NZ_CP089942.1 Protein Homology CDS 880779 881678 . - 0 ID=cds-WP_233481508.1;Parent=gene-LU604_RS04510;Dbxref=Genbank:WP_233481508.1;Name=WP_233481508.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012958.2;locus_tag=LU604_RS04510;product=alpha/beta hydrolase-fold protein;protein_id=WP_233481508.1;transl_table=11 NZ_CP089942.1 RefSeq gene 881826 882071 . - . ID=gene-LU604_RS04515;Name=LU604_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04515;old_locus_tag=LU604_04515 NZ_CP089942.1 GeneMarkS-2+ CDS 881826 882071 . - 0 ID=cds-WP_233480008.1;Parent=gene-LU604_RS04515;Dbxref=Genbank:WP_233480008.1;Name=WP_233480008.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04515;product=hypothetical protein;protein_id=WP_233480008.1;transl_table=11 NZ_CP089942.1 RefSeq gene 882185 882589 . - . ID=gene-LU604_RS04520;Name=LU604_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04520;old_locus_tag=LU604_04520 NZ_CP089942.1 Protein Homology CDS 882185 882589 . - 0 ID=cds-WP_233480009.1;Parent=gene-LU604_RS04520;Dbxref=Genbank:WP_233480009.1;Name=WP_233480009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192668.1;locus_tag=LU604_RS04520;product=helix-turn-helix domain-containing protein;protein_id=WP_233480009.1;transl_table=11 NZ_CP089942.1 RefSeq gene 882691 883542 . + . ID=gene-LU604_RS04525;Name=LU604_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04525;old_locus_tag=LU604_04525 NZ_CP089942.1 Protein Homology CDS 882691 883542 . + 0 ID=cds-WP_063428579.1;Parent=gene-LU604_RS04525;Dbxref=Genbank:WP_063428579.1;Name=WP_063428579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192667.1;locus_tag=LU604_RS04525;product=SDR family oxidoreductase;protein_id=WP_063428579.1;transl_table=11 NZ_CP089942.1 RefSeq gene 883539 883892 . - . ID=gene-LU604_RS04530;Name=LU604_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04530;old_locus_tag=LU604_04530 NZ_CP089942.1 GeneMarkS-2+ CDS 883539 883892 . - 0 ID=cds-WP_233481509.1;Parent=gene-LU604_RS04530;Dbxref=Genbank:WP_233481509.1;Name=WP_233481509.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04530;product=hypothetical protein;protein_id=WP_233481509.1;transl_table=11 NZ_CP089942.1 RefSeq gene 883849 884121 . - . ID=gene-LU604_RS04535;Name=LU604_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04535;old_locus_tag=LU604_04535 NZ_CP089942.1 GeneMarkS-2+ CDS 883849 884121 . - 0 ID=cds-WP_233480011.1;Parent=gene-LU604_RS04535;Dbxref=Genbank:WP_233480011.1;Name=WP_233480011.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04535;product=hypothetical protein;protein_id=WP_233480011.1;transl_table=11 NZ_CP089942.1 RefSeq gene 884360 884563 . + . ID=gene-LU604_RS04540;Name=LU604_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04540;old_locus_tag=LU604_04540 NZ_CP089942.1 GeneMarkS-2+ CDS 884360 884563 . + 0 ID=cds-WP_233480897.1;Parent=gene-LU604_RS04540;Dbxref=Genbank:WP_233480897.1;Name=WP_233480897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04540;product=hypothetical protein;protein_id=WP_233480897.1;transl_table=11 NZ_CP089942.1 RefSeq gene 884971 885423 . - . ID=gene-LU604_RS04545;Name=LU604_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04545;old_locus_tag=LU604_04545 NZ_CP089942.1 Protein Homology CDS 884971 885423 . - 0 ID=cds-WP_233480012.1;Parent=gene-LU604_RS04545;Dbxref=Genbank:WP_233480012.1;Name=WP_233480012.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122498.1;locus_tag=LU604_RS04545;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_233480012.1;transl_table=11 NZ_CP089942.1 RefSeq gene 885571 886116 . - . ID=gene-LU604_RS26890;Name=LU604_RS26890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26890 NZ_CP089942.1 Protein Homology CDS 885571 886116 . - 0 ID=cds-WP_252120243.1;Parent=gene-LU604_RS26890;Dbxref=Genbank:WP_252120243.1;Name=WP_252120243.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS26890;product=transposase;protein_id=WP_252120243.1;transl_table=11 NZ_CP089942.1 RefSeq gene 886113 886793 . - . ID=gene-LU604_RS26895;Name=LU604_RS26895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26895 NZ_CP089942.1 Protein Homology CDS 886113 886793 . - 0 ID=cds-WP_252120230.1;Parent=gene-LU604_RS26895;Dbxref=Genbank:WP_252120230.1;Name=WP_252120230.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025677.2;locus_tag=LU604_RS26895;product=transposase zinc-binding domain-containing protein;protein_id=WP_252120230.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 886875 887378 . - . ID=gene-LU604_RS04555;Name=LU604_RS04555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04555;old_locus_tag=LU604_04555;partial=true;pseudo=true;start_range=.,886875 NZ_CP089942.1 Protein Homology CDS 886875 887378 . - 0 ID=cds-LU604_RS04555;Parent=gene-LU604_RS04555;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606384.1;locus_tag=LU604_RS04555;partial=true;product=DUF4158 domain-containing protein;pseudo=true;start_range=.,886875;transl_table=11 NZ_CP089942.1 RefSeq gene 887488 887778 . + . ID=gene-LU604_RS04560;Name=LU604_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04560;old_locus_tag=LU604_04560 NZ_CP089942.1 GeneMarkS-2+ CDS 887488 887778 . + 0 ID=cds-WP_233480013.1;Parent=gene-LU604_RS04560;Dbxref=Genbank:WP_233480013.1;Name=WP_233480013.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04560;product=hypothetical protein;protein_id=WP_233480013.1;transl_table=11 NZ_CP089942.1 RefSeq gene 888155 888409 . + . ID=gene-LU604_RS04565;Name=LU604_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04565;old_locus_tag=LU604_04565 NZ_CP089942.1 Protein Homology CDS 888155 888409 . + 0 ID=cds-WP_000104338.1;Parent=gene-LU604_RS04565;Dbxref=Genbank:WP_000104338.1;Name=WP_000104338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000534858.1;locus_tag=LU604_RS04565;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_000104338.1;transl_table=11 NZ_CP089942.1 RefSeq gene 888399 888689 . + . ID=gene-LU604_RS04570;Name=LU604_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04570;old_locus_tag=LU604_04570 NZ_CP089942.1 Protein Homology CDS 888399 888689 . + 0 ID=cds-WP_000143805.1;Parent=gene-LU604_RS04570;Dbxref=Genbank:WP_000143805.1;Name=WP_000143805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000323025.1;locus_tag=LU604_RS04570;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000143805.1;transl_table=11 NZ_CP089942.1 RefSeq gene 889033 890256 . - . ID=gene-LU604_RS04575;Name=LU604_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04575;old_locus_tag=LU604_04575 NZ_CP089942.1 Protein Homology CDS 889033 890256 . - 0 ID=cds-WP_233481510.1;Parent=gene-LU604_RS04575;Dbxref=Genbank:WP_233481510.1;Name=WP_233481510.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU604_RS04575;product=IS91 family transposase;protein_id=WP_233481510.1;transl_table=11 NZ_CP089942.1 RefSeq gene 890355 890774 . + . ID=gene-LU604_RS04580;Name=LU604_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04580;old_locus_tag=LU604_04580 NZ_CP089942.1 Protein Homology CDS 890355 890774 . + 0 ID=cds-WP_233480739.1;Parent=gene-LU604_RS04580;Dbxref=Genbank:WP_233480739.1;Name=WP_233480739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000904945.1;locus_tag=LU604_RS04580;product=recombinase family protein;protein_id=WP_233480739.1;transl_table=11 NZ_CP089942.1 RefSeq gene 891013 891930 . + . ID=gene-LU604_RS04585;Name=LU604_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04585;old_locus_tag=LU604_04585 NZ_CP089942.1 Protein Homology CDS 891013 891930 . + 0 ID=cds-WP_233480014.1;Parent=gene-LU604_RS04585;Dbxref=Genbank:WP_233480014.1;Name=WP_233480014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144378.1;locus_tag=LU604_RS04585;product=hypothetical protein;protein_id=WP_233480014.1;transl_table=11 NZ_CP089942.1 RefSeq gene 892051 892650 . + . ID=gene-LU604_RS04590;Name=LU604_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04590;old_locus_tag=LU604_04590 NZ_CP089942.1 Protein Homology CDS 892051 892650 . + 0 ID=cds-WP_233481511.1;Parent=gene-LU604_RS04590;Dbxref=Genbank:WP_233481511.1;Name=WP_233481511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010427611.1;locus_tag=LU604_RS04590;product=DUF2913 family protein;protein_id=WP_233481511.1;transl_table=11 NZ_CP089942.1 RefSeq gene 892820 893860 . - . ID=gene-LU604_RS04595;Name=LU604_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04595;old_locus_tag=LU604_04595 NZ_CP089942.1 Protein Homology CDS 892820 893860 . - 0 ID=cds-WP_233478553.1-6;Parent=gene-LU604_RS04595;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS04595;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 893965 894903 . - . ID=gene-LU604_RS04600;Name=LU604_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04600;old_locus_tag=LU604_04600 NZ_CP089942.1 Protein Homology CDS 893965 894903 . - 0 ID=cds-WP_233480016.1;Parent=gene-LU604_RS04600;Dbxref=Genbank:WP_233480016.1;Name=WP_233480016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009351674.1;locus_tag=LU604_RS04600;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_233480016.1;transl_table=11 NZ_CP089942.1 RefSeq gene 894977 895393 . - . ID=gene-LU604_RS04605;Name=LU604_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04605;old_locus_tag=LU604_04605 NZ_CP089942.1 Protein Homology CDS 894977 895393 . - 0 ID=cds-WP_233480017.1;Parent=gene-LU604_RS04605;Dbxref=Genbank:WP_233480017.1;Name=WP_233480017.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016479973.1;locus_tag=LU604_RS04605;product=restriction endonuclease;protein_id=WP_233480017.1;transl_table=11 NZ_CP089942.1 RefSeq gene 895380 895754 . - . ID=gene-LU604_RS04610;Name=LU604_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04610;old_locus_tag=LU604_04610 NZ_CP089942.1 GeneMarkS-2+ CDS 895380 895754 . - 0 ID=cds-WP_233481512.1;Parent=gene-LU604_RS04610;Dbxref=Genbank:WP_233481512.1;Name=WP_233481512.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04610;product=hypothetical protein;protein_id=WP_233481512.1;transl_table=11 NZ_CP089942.1 RefSeq gene 895902 897125 . - . ID=gene-LU604_RS04615;Name=LU604_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04615;old_locus_tag=LU604_04615 NZ_CP089942.1 Protein Homology CDS 895902 897125 . - 0 ID=cds-WP_233478977.1-3;Parent=gene-LU604_RS04615;Dbxref=Genbank:WP_233478977.1;Name=WP_233478977.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU604_RS04615;product=IS91 family transposase;protein_id=WP_233478977.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 897215 897817 . + . ID=gene-LU604_RS04620;Name=LU604_RS04620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04620;old_locus_tag=LU604_04620;partial=true;pseudo=true;start_range=.,897215 NZ_CP089942.1 Protein Homology CDS 897215 897817 . + 0 ID=cds-LU604_RS04620;Parent=gene-LU604_RS04620;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013360143.1;locus_tag=LU604_RS04620;partial=true;product=hypothetical protein;pseudo=true;start_range=.,897215;transl_table=11 NZ_CP089942.1 RefSeq gene 897820 898167 . + . ID=gene-LU604_RS04625;Name=LU604_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04625;old_locus_tag=LU604_04625 NZ_CP089942.1 Protein Homology CDS 897820 898167 . + 0 ID=cds-WP_233480019.1;Parent=gene-LU604_RS04625;Dbxref=Genbank:WP_233480019.1;Name=WP_233480019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168498.1;locus_tag=LU604_RS04625;product=contact-dependent growth inhibition system immunity protein;protein_id=WP_233480019.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 898202 899242 . - . ID=gene-LU604_RS04630;Name=LU604_RS04630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04630;old_locus_tag=LU604_04630;pseudo=true NZ_CP089942.1 Protein Homology CDS 898202 899242 . - 0 ID=cds-LU604_RS04630;Parent=gene-LU604_RS04630;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS04630;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 899433 899585 . + . ID=gene-LU604_RS04635;Name=LU604_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04635;old_locus_tag=LU604_04635 NZ_CP089942.1 GeneMarkS-2+ CDS 899433 899585 . + 0 ID=cds-WP_233481513.1;Parent=gene-LU604_RS04635;Dbxref=Genbank:WP_233481513.1;Name=WP_233481513.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04635;product=hypothetical protein;protein_id=WP_233481513.1;transl_table=11 NZ_CP089942.1 RefSeq gene 899570 899971 . + . ID=gene-LU604_RS04640;Name=LU604_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04640;old_locus_tag=LU604_04640 NZ_CP089942.1 GeneMarkS-2+ CDS 899570 899971 . + 0 ID=cds-WP_233480021.1;Parent=gene-LU604_RS04640;Dbxref=Genbank:WP_233480021.1;Name=WP_233480021.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04640;product=hypothetical protein;protein_id=WP_233480021.1;transl_table=11 NZ_CP089942.1 RefSeq gene 900132 901244 . + . ID=gene-LU604_RS04645;Name=LU604_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04645;old_locus_tag=LU604_04645 NZ_CP089942.1 GeneMarkS-2+ CDS 900132 901244 . + 0 ID=cds-WP_233480022.1;Parent=gene-LU604_RS04645;Dbxref=Genbank:WP_233480022.1;Name=WP_233480022.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04645;product=hypothetical protein;protein_id=WP_233480022.1;transl_table=11 NZ_CP089942.1 RefSeq gene 901241 901729 . + . ID=gene-LU604_RS04650;Name=LU604_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04650;old_locus_tag=LU604_04650 NZ_CP089942.1 GeneMarkS-2+ CDS 901241 901729 . + 0 ID=cds-WP_233481514.1;Parent=gene-LU604_RS04650;Dbxref=Genbank:WP_233481514.1;Name=WP_233481514.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04650;product=hypothetical protein;protein_id=WP_233481514.1;transl_table=11 NZ_CP089942.1 RefSeq gene 901918 903038 . + . ID=gene-LU604_RS04655;Name=LU604_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04655;old_locus_tag=LU604_04655 NZ_CP089942.1 Protein Homology CDS 901918 902176 . + 0 ID=cds-WP_233480024.1;Parent=gene-LU604_RS04655;Dbxref=Genbank:WP_233480024.1;Name=WP_233480024.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS04655;product=IS3 family transposase;protein_id=WP_233480024.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 902176 903038 . + 2 ID=cds-WP_233480024.1;Parent=gene-LU604_RS04655;Dbxref=Genbank:WP_233480024.1;Name=WP_233480024.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS04655;product=IS3 family transposase;protein_id=WP_233480024.1;transl_table=11 NZ_CP089942.1 RefSeq gene 903203 903613 . + . ID=gene-LU604_RS04660;Name=LU604_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04660;old_locus_tag=LU604_04660 NZ_CP089942.1 Protein Homology CDS 903203 903613 . + 0 ID=cds-WP_233480025.1;Parent=gene-LU604_RS04660;Dbxref=Genbank:WP_233480025.1;Name=WP_233480025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122104.1;locus_tag=LU604_RS04660;product=type III chaperone protein ShcF;protein_id=WP_233480025.1;transl_table=11 NZ_CP089942.1 RefSeq gene 903711 904631 . + . ID=gene-LU604_RS04665;Name=LU604_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04665;old_locus_tag=LU604_04665 NZ_CP089942.1 Protein Homology CDS 903711 904631 . + 0 ID=cds-WP_233480026.1;Parent=gene-LU604_RS04665;Dbxref=Genbank:WP_233480026.1;Name=WP_233480026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122105.1;locus_tag=LU604_RS04665;product=hypothetical protein;protein_id=WP_233480026.1;transl_table=11 NZ_CP089942.1 RefSeq gene 904847 905152 . + . ID=gene-LU604_RS04670;Name=LU604_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04670;old_locus_tag=LU604_04670 NZ_CP089942.1 GeneMarkS-2+ CDS 904847 905152 . + 0 ID=cds-WP_233480027.1;Parent=gene-LU604_RS04670;Dbxref=Genbank:WP_233480027.1;Name=WP_233480027.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04670;product=hypothetical protein;protein_id=WP_233480027.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 905068 906268 . - . ID=gene-LU604_RS04675;Name=LU604_RS04675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04675;old_locus_tag=LU604_04675;pseudo=true NZ_CP089942.1 Protein Homology CDS 905068 906268 . - 0 ID=cds-LU604_RS04675;Parent=gene-LU604_RS04675;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611429.1;locus_tag=LU604_RS04675;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 906370 907605 . - . ID=gene-LU604_RS04680;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=pseudogene;locus_tag=LU604_RS04680;old_locus_tag=LU604_04680;pseudo=true NZ_CP089942.1 Protein Homology CDS 906370 907605 . - 0 ID=cds-LU604_RS04680;Parent=gene-LU604_RS04680;Note=frameshifted%3B internal stop;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170430.1;locus_tag=LU604_RS04680;product=alanine transaminase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 908436 909401 . - . ID=gene-LU604_RS04685;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=LU604_RS04685;old_locus_tag=LU604_04685 NZ_CP089942.1 Protein Homology CDS 908436 909401 . - 0 ID=cds-WP_233480028.1;Parent=gene-LU604_RS04685;Dbxref=Genbank:WP_233480028.1;Name=WP_233480028.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594240.1;locus_tag=LU604_RS04685;product=glucokinase;protein_id=WP_233480028.1;transl_table=11 NZ_CP089942.1 RefSeq gene 910114 910584 . - . ID=gene-LU604_RS04690;Name=LU604_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04690;old_locus_tag=LU604_04690 NZ_CP089942.1 Protein Homology CDS 910114 910584 . - 0 ID=cds-WP_016192054.1;Parent=gene-LU604_RS04690;Dbxref=Genbank:WP_016192054.1;Name=WP_016192054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171915.1;locus_tag=LU604_RS04690;product=VirK family protein;protein_id=WP_016192054.1;transl_table=11 NZ_CP089942.1 RefSeq gene 910701 911398 . - . ID=gene-LU604_RS04695;Name=LU604_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04695;old_locus_tag=LU604_04695 NZ_CP089942.1 Protein Homology CDS 911149 911398 . - 0 ID=cds-WP_233480029.1;Parent=gene-LU604_RS04695;Dbxref=Genbank:WP_233480029.1;Name=WP_233480029.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS04695;product=IS1 family transposase;protein_id=WP_233480029.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 910701 911149 . - 2 ID=cds-WP_233480029.1;Parent=gene-LU604_RS04695;Dbxref=Genbank:WP_233480029.1;Name=WP_233480029.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS04695;product=IS1 family transposase;protein_id=WP_233480029.1;transl_table=11 NZ_CP089942.1 RefSeq gene 911664 912704 . - . ID=gene-LU604_RS04700;Name=LU604_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04700;old_locus_tag=LU604_04700 NZ_CP089942.1 Protein Homology CDS 911664 912704 . - 0 ID=cds-WP_233478553.1-7;Parent=gene-LU604_RS04700;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS04700;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 913091 914265 . - . ID=gene-LU604_RS04705;Name=LU604_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04705;old_locus_tag=LU604_04705 NZ_CP089942.1 Protein Homology CDS 914010 914265 . - 0 ID=cds-WP_233481515.1;Parent=gene-LU604_RS04705;Dbxref=Genbank:WP_233481515.1;Name=WP_233481515.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612096.1;locus_tag=LU604_RS04705;product=IS3 family transposase;protein_id=WP_233481515.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 913091 914010 . - 2 ID=cds-WP_233481515.1;Parent=gene-LU604_RS04705;Dbxref=Genbank:WP_233481515.1;Name=WP_233481515.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612096.1;locus_tag=LU604_RS04705;product=IS3 family transposase;protein_id=WP_233481515.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 914832 916045 . + . ID=gene-LU604_RS04710;Name=LU604_RS04710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04710;old_locus_tag=LU604_04710;partial=true;pseudo=true;start_range=.,914832 NZ_CP089942.1 Protein Homology CDS 914832 916045 . + 0 ID=cds-LU604_RS04710;Parent=gene-LU604_RS04710;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008150,GO:0005524,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=ATP binding|0005524||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012822421.1;locus_tag=LU604_RS04710;partial=true;product=conjugative transfer ATPase;pseudo=true;start_range=.,914832;transl_table=11 NZ_CP089942.1 RefSeq gene 916042 916446 . + . ID=gene-LU604_RS04715;Name=LU604_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04715;old_locus_tag=LU604_04715 NZ_CP089942.1 Protein Homology CDS 916042 916446 . + 0 ID=cds-WP_016192662.1;Parent=gene-LU604_RS04715;Dbxref=Genbank:WP_016192662.1;Name=WP_016192662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192058.1;locus_tag=LU604_RS04715;product=hypothetical protein;protein_id=WP_016192662.1;transl_table=11 NZ_CP089942.1 RefSeq gene 916621 916755 . + . ID=gene-LU604_RS26900;Name=LU604_RS26900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26900 NZ_CP089942.1 GeneMarkS-2+ CDS 916621 916755 . + 0 ID=cds-WP_256371725.1;Parent=gene-LU604_RS26900;Dbxref=Genbank:WP_256371725.1;Name=WP_256371725.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26900;product=hypothetical protein;protein_id=WP_256371725.1;transl_table=11 NZ_CP089942.1 RefSeq gene 916695 917603 . + . ID=gene-LU604_RS04720;Name=LU604_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04720;old_locus_tag=LU604_04720 NZ_CP089942.1 Protein Homology CDS 916695 917603 . + 0 ID=cds-WP_233481639.1;Parent=gene-LU604_RS04720;Dbxref=Genbank:WP_233481639.1;Name=WP_233481639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_035718769.1;locus_tag=LU604_RS04720;product=IS481 family transposase;protein_id=WP_233481639.1;transl_table=11 NZ_CP089942.1 RefSeq gene 917638 918003 . - . ID=gene-LU604_RS04725;Name=LU604_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04725;old_locus_tag=LU604_04725 NZ_CP089942.1 Protein Homology CDS 917638 918003 . - 0 ID=cds-WP_233480031.1;Parent=gene-LU604_RS04725;Dbxref=Genbank:WP_233480031.1;Name=WP_233480031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192062.1;locus_tag=LU604_RS04725;product=universal stress protein;protein_id=WP_233480031.1;transl_table=11 NZ_CP089942.1 RefSeq gene 918010 918792 . - . ID=gene-LU604_RS04730;Name=LU604_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04730;old_locus_tag=LU604_04730 NZ_CP089942.1 Protein Homology CDS 918010 918792 . - 0 ID=cds-WP_233480032.1;Parent=gene-LU604_RS04730;Dbxref=Genbank:WP_233480032.1;Name=WP_233480032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005768.1;locus_tag=LU604_RS04730;product=IclR family transcriptional regulator;protein_id=WP_233480032.1;transl_table=11 NZ_CP089942.1 RefSeq gene 918954 920546 . + . ID=gene-LU604_RS04735;Name=LU604_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04735;old_locus_tag=LU604_04735 NZ_CP089942.1 Protein Homology CDS 918954 920546 . + 0 ID=cds-WP_233480033.1;Parent=gene-LU604_RS04735;Dbxref=Genbank:WP_233480033.1;Name=WP_233480033.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192064.1;locus_tag=LU604_RS04735;product=MFS transporter;protein_id=WP_233480033.1;transl_table=11 NZ_CP089942.1 RefSeq gene 920549 921577 . + . ID=gene-LU604_RS04740;Name=LU604_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04740;old_locus_tag=LU604_04740 NZ_CP089942.1 Protein Homology CDS 920549 921577 . + 0 ID=cds-WP_233480034.1;Parent=gene-LU604_RS04740;Dbxref=Genbank:WP_233480034.1;Name=WP_233480034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010257869.1;locus_tag=LU604_RS04740;product=HlyD family secretion protein;protein_id=WP_233480034.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 921834 922787 . - . ID=gene-LU604_RS04745;Name=LU604_RS04745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04745;old_locus_tag=LU604_04745;pseudo=true NZ_CP089942.1 Protein Homology CDS 921834 922787 . - 0 ID=cds-LU604_RS04745;Parent=gene-LU604_RS04745;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011073373.1;locus_tag=LU604_RS04745;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 923204 924201 . - . ID=gene-LU604_RS04750;Name=LU604_RS04750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04750;old_locus_tag=LU604_04750;pseudo=true NZ_CP089942.1 Protein Homology CDS 923204 924201 . - 0 ID=cds-LU604_RS04750;Parent=gene-LU604_RS04750;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492245.1;locus_tag=LU604_RS04750;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 924552 925319 . - . ID=gene-LU604_RS04755;Name=LU604_RS04755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04755;old_locus_tag=LU604_04755;pseudo=true NZ_CP089942.1 Protein Homology CDS 924552 925319 . - 0 ID=cds-LU604_RS04755;Parent=gene-LU604_RS04755;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917256.1;locus_tag=LU604_RS04755;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 925527 926162 . + . ID=gene-LU604_RS04760;Name=LU604_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04760;old_locus_tag=LU604_04760 NZ_CP089942.1 Protein Homology CDS 925527 926162 . + 0 ID=cds-WP_233480035.1;Parent=gene-LU604_RS04760;Dbxref=Genbank:WP_233480035.1;Name=WP_233480035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178560.1;locus_tag=LU604_RS04760;product=response regulator transcription factor;protein_id=WP_233480035.1;transl_table=11 NZ_CP089942.1 RefSeq gene 926149 929301 . + . ID=gene-LU604_RS04765;Name=LU604_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04765;old_locus_tag=LU604_04765 NZ_CP089942.1 Protein Homology CDS 926149 929301 . + 0 ID=cds-WP_233480036.1;Parent=gene-LU604_RS04765;Dbxref=Genbank:WP_233480036.1;Name=WP_233480036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178561.1;locus_tag=LU604_RS04765;product=transporter substrate-binding domain-containing protein;protein_id=WP_233480036.1;transl_table=11 NZ_CP089942.1 RefSeq gene 929428 929862 . + . ID=gene-LU604_RS04770;Name=LU604_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04770;old_locus_tag=LU604_04770 NZ_CP089942.1 Protein Homology CDS 929428 929862 . + 0 ID=cds-WP_233480037.1;Parent=gene-LU604_RS04770;Dbxref=Genbank:WP_233480037.1;Name=WP_233480037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098815.1;locus_tag=LU604_RS04770;product=DUF1090 domain-containing protein;protein_id=WP_233480037.1;transl_table=11 NZ_CP089942.1 RefSeq gene 929917 932040 . + . ID=gene-LU604_RS04775;Name=LU604_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04775;old_locus_tag=LU604_04775 NZ_CP089942.1 Protein Homology CDS 929917 932040 . + 0 ID=cds-WP_233481516.1;Parent=gene-LU604_RS04775;Dbxref=Genbank:WP_233481516.1;Name=WP_233481516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178563.1;locus_tag=LU604_RS04775;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_233481516.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 932110 932412 . - . ID=gene-LU604_RS04780;Name=LU604_RS04780;end_range=932412,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04780;old_locus_tag=LU604_04780;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 932110 932412 . - 0 ID=cds-LU604_RS04780;Parent=gene-LU604_RS04780;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=932412,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811978.1;locus_tag=LU604_RS04780;partial=true;product=DNA topoisomerase IV subunit B;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 932465 933634 . - . ID=gene-LU604_RS04785;Name=LU604_RS04785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04785;old_locus_tag=LU604_04785;pseudo=true NZ_CP089942.1 Protein Homology CDS 932465 933634 . - 0 ID=cds-LU604_RS04785;Parent=gene-LU604_RS04785;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611429.1;locus_tag=LU604_RS04785;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 934042 934838 . + . ID=gene-LU604_RS04790;Name=LU604_RS04790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04790;old_locus_tag=LU604_04790;pseudo=true NZ_CP089942.1 Protein Homology CDS 934042 934838 . + 0 ID=cds-LU604_RS04790;Parent=gene-LU604_RS04790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006781413.1;locus_tag=LU604_RS04790;product=ATP-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 934828 935580 . + . ID=gene-LU604_RS04795;Name=LU604_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04795;old_locus_tag=LU604_04795 NZ_CP089942.1 Protein Homology CDS 934828 935580 . + 0 ID=cds-WP_233480039.1;Parent=gene-LU604_RS04795;Dbxref=Genbank:WP_233480039.1;Name=WP_233480039.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03760.1;locus_tag=LU604_RS04795;product=TraI domain-containing protein;protein_id=WP_233480039.1;transl_table=11 NZ_CP089942.1 RefSeq gene 935587 936408 . + . ID=gene-LU604_RS04800;Name=LU604_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04800;old_locus_tag=LU604_04800 NZ_CP089942.1 Protein Homology CDS 935587 936408 . + 0 ID=cds-WP_233480040.1;Parent=gene-LU604_RS04800;Dbxref=Genbank:WP_233480040.1;Name=WP_233480040.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019154.2;locus_tag=LU604_RS04800;product=DNA-binding domain-containing protein;protein_id=WP_233480040.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 936457 937466 . + . ID=gene-LU604_RS04805;Name=LU604_RS04805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04805;old_locus_tag=LU604_04805;pseudo=true NZ_CP089942.1 Protein Homology CDS 936457 937466 . + 0 ID=cds-LU604_RS04805;Parent=gene-LU604_RS04805;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869818.1;locus_tag=LU604_RS04805;product=site-specific integrase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 938044 938247 . + . ID=gene-LU604_RS04810;Name=LU604_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04810;old_locus_tag=LU604_04810 NZ_CP089942.1 Protein Homology CDS 938044 938247 . + 0 ID=cds-WP_016192014.1;Parent=gene-LU604_RS04810;Dbxref=Genbank:WP_016192014.1;Name=WP_016192014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240318.1;locus_tag=LU604_RS04810;product=AlpA family transcriptional regulator;protein_id=WP_016192014.1;transl_table=11 NZ_CP089942.1 RefSeq gene 938397 938645 . - . ID=gene-LU604_RS04815;Name=LU604_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04815;old_locus_tag=LU604_04815 NZ_CP089942.1 Protein Homology CDS 938397 938645 . - 0 ID=cds-WP_016192013.1;Parent=gene-LU604_RS04815;Dbxref=Genbank:WP_016192013.1;Name=WP_016192013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240319.1;locus_tag=LU604_RS04815;product=hypothetical protein;protein_id=WP_016192013.1;transl_table=11 NZ_CP089942.1 RefSeq gene 938642 939334 . - . ID=gene-LU604_RS04820;Name=LU604_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04820;old_locus_tag=LU604_04820 NZ_CP089942.1 Protein Homology CDS 938642 939334 . - 0 ID=cds-WP_233480041.1;Parent=gene-LU604_RS04820;Dbxref=Genbank:WP_233480041.1;Name=WP_233480041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192012.1;locus_tag=LU604_RS04820;product=replication initiation protein;protein_id=WP_233480041.1;transl_table=11 NZ_CP089942.1 RefSeq gene 939951 940469 . + . ID=gene-LU604_RS04825;Name=LU604_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04825;old_locus_tag=LU604_04825 NZ_CP089942.1 Protein Homology CDS 939951 940469 . + 0 ID=cds-WP_233480741.1;Parent=gene-LU604_RS04825;Dbxref=Genbank:WP_233480741.1;Name=WP_233480741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012969062.1;locus_tag=LU604_RS04825;product=DUF2778 domain-containing protein;protein_id=WP_233480741.1;transl_table=11 NZ_CP089942.1 RefSeq gene 940447 940710 . + . ID=gene-LU604_RS04830;Name=LU604_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04830;old_locus_tag=LU604_04830 NZ_CP089942.1 Protein Homology CDS 940447 940710 . + 0 ID=cds-WP_233480042.1;Parent=gene-LU604_RS04830;Dbxref=Genbank:WP_233480042.1;Name=WP_233480042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606685.1;locus_tag=LU604_RS04830;product=hypothetical protein;protein_id=WP_233480042.1;transl_table=11 NZ_CP089942.1 RefSeq gene 940712 941203 . + . ID=gene-LU604_RS04835;Name=tssD;gbkey=Gene;gene=tssD;gene_biotype=protein_coding;locus_tag=LU604_RS04835;old_locus_tag=LU604_04835 NZ_CP089942.1 Protein Homology CDS 940712 941203 . + 0 ID=cds-WP_233480043.1;Parent=gene-LU604_RS04835;Dbxref=Genbank:WP_233480043.1;Name=WP_233480043.1;Ontology_term=GO:0003674;gbkey=CDS;gene=tssD;go_function=molecular_function|0003674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192008.1;locus_tag=LU604_RS04835;product=type VI secretion system tube protein TssD;protein_id=WP_233480043.1;transl_table=11 NZ_CP089942.1 RefSeq gene 941549 941698 . + . ID=gene-LU604_RS04840;Name=LU604_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04840;old_locus_tag=LU604_04840 NZ_CP089942.1 GeneMarkS-2+ CDS 941549 941698 . + 0 ID=cds-WP_233480044.1;Parent=gene-LU604_RS04840;Dbxref=Genbank:WP_233480044.1;Name=WP_233480044.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04840;product=hypothetical protein;protein_id=WP_233480044.1;transl_table=11 NZ_CP089942.1 RefSeq gene 941841 942116 . + . ID=gene-LU604_RS04845;Name=LU604_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04845;old_locus_tag=LU604_04845 NZ_CP089942.1 Protein Homology CDS 941841 942116 . + 0 ID=cds-WP_016192006.1;Parent=gene-LU604_RS04845;Dbxref=Genbank:WP_016192006.1;Name=WP_016192006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151481.1;locus_tag=LU604_RS04845;product=hypothetical protein;protein_id=WP_016192006.1;transl_table=11 NZ_CP089942.1 RefSeq gene 942614 942877 . + . ID=gene-LU604_RS04850;Name=LU604_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04850;old_locus_tag=LU604_04850 NZ_CP089942.1 GeneMarkS-2+ CDS 942614 942877 . + 0 ID=cds-WP_046372289.1;Parent=gene-LU604_RS04850;Dbxref=Genbank:WP_046372289.1;Name=WP_046372289.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04850;product=hypothetical protein;protein_id=WP_046372289.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 942909 943013 . + . ID=gene-LU604_RS04855;Name=LU604_RS04855;end_range=943013,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04855;old_locus_tag=LU604_04855;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 942909 943013 . + 0 ID=cds-LU604_RS04855;Parent=gene-LU604_RS04855;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=943013,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU604_RS04855;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 943158 943703 . - . ID=gene-LU604_RS26905;Name=LU604_RS26905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26905 NZ_CP089942.1 Protein Homology CDS 943158 943703 . - 0 ID=cds-WP_252120243.1-2;Parent=gene-LU604_RS26905;Dbxref=Genbank:WP_252120243.1;Name=WP_252120243.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS26905;product=transposase;protein_id=WP_252120243.1;transl_table=11 NZ_CP089942.1 RefSeq gene 943700 944380 . - . ID=gene-LU604_RS26910;Name=LU604_RS26910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26910 NZ_CP089942.1 Protein Homology CDS 943700 944380 . - 0 ID=cds-WP_252120230.1-2;Parent=gene-LU604_RS26910;Dbxref=Genbank:WP_252120230.1;Name=WP_252120230.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025677.2;locus_tag=LU604_RS26910;product=transposase zinc-binding domain-containing protein;protein_id=WP_252120230.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 944469 945058 . + . ID=gene-LU604_RS04865;Name=LU604_RS04865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04865;old_locus_tag=LU604_04865;partial=true;pseudo=true;start_range=.,944469 NZ_CP089942.1 Protein Homology CDS 944469 945058 . + 0 ID=cds-LU604_RS04865;Parent=gene-LU604_RS04865;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU604_RS04865;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,944469;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 945366 945669 . + . ID=gene-LU604_RS04870;Name=LU604_RS04870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04870;old_locus_tag=LU604_04870;pseudo=true NZ_CP089942.1 Protein Homology CDS 945366 945669 . + 0 ID=cds-LU604_RS04870;Parent=gene-LU604_RS04870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015701164.1;locus_tag=LU604_RS04870;product=RAQPRD family integrative conjugative element protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 945666 945905 . + . ID=gene-LU604_RS04875;Name=LU604_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04875;old_locus_tag=LU604_04875 NZ_CP089942.1 Protein Homology CDS 945666 945905 . + 0 ID=cds-WP_232426902.1;Parent=gene-LU604_RS04875;Dbxref=Genbank:WP_232426902.1;Name=WP_232426902.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: protein motif:HMM:TIGR03758.1;locus_tag=LU604_RS04875;product=TIGR03758 family integrating conjugative element protein;protein_id=WP_232426902.1;transl_table=11 NZ_CP089942.1 RefSeq gene 946050 946310 . + . ID=gene-LU604_RS04880;Name=LU604_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04880;old_locus_tag=LU604_04880 NZ_CP089942.1 Protein Homology CDS 946050 946310 . + 0 ID=cds-WP_152664198.1-2;Parent=gene-LU604_RS04880;Dbxref=Genbank:WP_152664198.1;Name=WP_152664198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193251.1;locus_tag=LU604_RS04880;product=hypothetical protein;protein_id=WP_152664198.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 946297 946702 . + . ID=gene-LU604_RS04885;Name=LU604_RS04885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04885;old_locus_tag=LU604_04885;pseudo=true NZ_CP089942.1 Protein Homology CDS 946297 946702 . + 0 ID=cds-LU604_RS04885;Parent=gene-LU604_RS04885;Note=frameshifted;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192002.1;locus_tag=LU604_RS04885;product=TIGR03751 family conjugal transfer lipoprotein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 946702 948910 . + . ID=gene-LU604_RS04890;Name=LU604_RS04890;end_range=948910,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04890;old_locus_tag=LU604_04890;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 946702 948910 . + 0 ID=cds-LU604_RS04890;Parent=gene-LU604_RS04890;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008150,GO:0005524,GO:0005575;end_range=948910,.;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=ATP binding|0005524||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669260.1;locus_tag=LU604_RS04890;partial=true;product=conjugative transfer ATPase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 949069 950110 . + . ID=gene-LU604_RS04895;Name=LU604_RS04895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04895;old_locus_tag=LU604_04895;pseudo=true NZ_CP089942.1 Protein Homology CDS 949069 950110 . + 0 ID=cds-LU604_RS04895;Parent=gene-LU604_RS04895;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS04895;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 950172 950804 . + . ID=gene-LU604_RS04900;Name=LU604_RS04900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04900;old_locus_tag=LU604_04900;partial=true;pseudo=true;start_range=.,950172 NZ_CP089942.1 Protein Homology CDS 950172 950804 . + 0 ID=cds-LU604_RS04900;Parent=gene-LU604_RS04900;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011145388.1;locus_tag=LU604_RS04900;partial=true;product=ParA family protein;pseudo=true;start_range=.,950172;transl_table=11 NZ_CP089942.1 RefSeq gene 950801 951181 . + . ID=gene-LU604_RS04905;Name=LU604_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04905;old_locus_tag=LU604_04905 NZ_CP089942.1 Protein Homology CDS 950801 951181 . + 0 ID=cds-WP_233481517.1;Parent=gene-LU604_RS04905;Dbxref=Genbank:WP_233481517.1;Name=WP_233481517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114272.1;locus_tag=LU604_RS04905;product=hypothetical protein;protein_id=WP_233481517.1;transl_table=11 NZ_CP089942.1 RefSeq gene 951178 951420 . + . ID=gene-LU604_RS04910;Name=LU604_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04910;old_locus_tag=LU604_04910 NZ_CP089942.1 GeneMarkS-2+ CDS 951178 951420 . + 0 ID=cds-WP_233481518.1;Parent=gene-LU604_RS04910;Dbxref=Genbank:WP_233481518.1;Name=WP_233481518.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS04910;product=hypothetical protein;protein_id=WP_233481518.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 951430 952790 . + . ID=gene-LU604_RS04915;Name=dnaB-PI;gbkey=Gene;gene=dnaB-PI;gene_biotype=pseudogene;locus_tag=LU604_RS04915;old_locus_tag=LU604_04915;pseudo=true NZ_CP089942.1 Protein Homology CDS 951430 952790 . + 0 ID=cds-LU604_RS04915;Parent=gene-LU604_RS04915;Note=frameshifted;gbkey=CDS;gene=dnaB-PI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190687.1;locus_tag=LU604_RS04915;product=SPI-7-type island replicative DNA helicase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 952787 954466 . + . ID=gene-LU604_RS04920;Name=LU604_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04920;old_locus_tag=LU604_04920 NZ_CP089942.1 Protein Homology CDS 952787 954466 . + 0 ID=cds-WP_233481519.1;Parent=gene-LU604_RS04920;Dbxref=Genbank:WP_233481519.1;Name=WP_233481519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006777719.1;locus_tag=LU604_RS04920;product=ParB family protein;protein_id=WP_233481519.1;transl_table=11 NZ_CP089942.1 RefSeq gene 954459 955181 . + . ID=gene-LU604_RS04925;Name=LU604_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04925;old_locus_tag=LU604_04925 NZ_CP089942.1 Protein Homology CDS 954459 955181 . + 0 ID=cds-WP_233481640.1;Parent=gene-LU604_RS04925;Dbxref=Genbank:WP_233481640.1;Name=WP_233481640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869768.1;locus_tag=LU604_RS04925;product=DUF2786 domain-containing protein;protein_id=WP_233481640.1;transl_table=11 NZ_CP089942.1 RefSeq gene 955371 956411 . + . ID=gene-LU604_RS04930;Name=LU604_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04930;old_locus_tag=LU604_04930 NZ_CP089942.1 Protein Homology CDS 955371 956411 . + 0 ID=cds-WP_233478553.1-8;Parent=gene-LU604_RS04930;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS04930;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 956789 957397 . + . ID=gene-LU604_RS04935;Name=LU604_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04935;old_locus_tag=LU604_04935 NZ_CP089942.1 Protein Homology CDS 956789 957397 . + 0 ID=cds-WP_032191366.1;Parent=gene-LU604_RS04935;Dbxref=Genbank:WP_032191366.1;Name=WP_032191366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869770.1;locus_tag=LU604_RS04935;product=DUF2857 domain-containing protein;protein_id=WP_032191366.1;transl_table=11 NZ_CP089942.1 RefSeq gene 957394 957642 . + . ID=gene-LU604_RS04940;Name=LU604_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04940;old_locus_tag=LU604_04940 NZ_CP089942.1 Protein Homology CDS 957394 957642 . + 0 ID=cds-WP_233480045.1;Parent=gene-LU604_RS04940;Dbxref=Genbank:WP_233480045.1;Name=WP_233480045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115572.1;locus_tag=LU604_RS04940;product=hypothetical protein;protein_id=WP_233480045.1;transl_table=11 NZ_CP089942.1 RefSeq gene 957733 958971 . + . ID=gene-LU604_RS04945;Name=LU604_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04945;old_locus_tag=LU604_04945 NZ_CP089942.1 Protein Homology CDS 957733 958971 . + 0 ID=cds-WP_233480046.1;Parent=gene-LU604_RS04945;Dbxref=Genbank:WP_233480046.1;Name=WP_233480046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869771.1;locus_tag=LU604_RS04945;product=STY4528 family pathogenicity island replication protein;protein_id=WP_233480046.1;transl_table=11 NZ_CP089942.1 RefSeq gene 959148 959903 . + . ID=gene-LU604_RS04950;Name=LU604_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04950;old_locus_tag=LU604_04950 NZ_CP089942.1 Protein Homology CDS 959148 959903 . + 0 ID=cds-WP_233480047.1;Parent=gene-LU604_RS04950;Dbxref=Genbank:WP_233480047.1;Name=WP_233480047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190693.1;locus_tag=LU604_RS04950;product=TIGR03761 family integrating conjugative element protein;protein_id=WP_233480047.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 959917 961964 . + . ID=gene-LU604_RS04955;Name=LU604_RS04955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04955;old_locus_tag=LU604_04955;pseudo=true NZ_CP089942.1 Protein Homology CDS 959917 961964 . + 0 ID=cds-LU604_RS04955;Parent=gene-LU604_RS04955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190694.1;locus_tag=LU604_RS04955;product=DNA topoisomerase III;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 962615 963079 . + . ID=gene-LU604_RS04960;Name=LU604_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04960;old_locus_tag=LU604_04960 NZ_CP089942.1 Protein Homology CDS 962615 963079 . + 0 ID=cds-WP_123828776.1;Parent=gene-LU604_RS04960;Dbxref=Genbank:WP_123828776.1;Name=WP_123828776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016151303.1;locus_tag=LU604_RS04960;product=STY4534 family ICE replication protein;protein_id=WP_123828776.1;transl_table=11 NZ_CP089942.1 RefSeq gene 963157 963360 . + . ID=gene-LU604_RS04965;Name=LU604_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04965;old_locus_tag=LU604_04965 NZ_CP089942.1 Protein Homology CDS 963157 963360 . + 0 ID=cds-WP_032191374.1;Parent=gene-LU604_RS04965;Dbxref=Genbank:WP_032191374.1;Name=WP_032191374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869776.1;locus_tag=LU604_RS04965;product=hypothetical protein;protein_id=WP_032191374.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 963373 963962 . + . ID=gene-LU604_RS04970;Name=LU604_RS04970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS04970;old_locus_tag=LU604_04970;pseudo=true NZ_CP089942.1 Protein Homology CDS 963373 963962 . + 0 ID=cds-LU604_RS04970;Parent=gene-LU604_RS04970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115562.1;locus_tag=LU604_RS04970;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 963976 964212 . + . ID=gene-LU604_RS04975;Name=LU604_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04975;old_locus_tag=LU604_04975 NZ_CP089942.1 Protein Homology CDS 963976 964212 . + 0 ID=cds-WP_233480048.1;Parent=gene-LU604_RS04975;Dbxref=Genbank:WP_233480048.1;Name=WP_233480048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190698.1;locus_tag=LU604_RS04975;product=DUF4160 domain-containing protein;protein_id=WP_233480048.1;transl_table=11 NZ_CP089942.1 RefSeq gene 964193 964456 . + . ID=gene-LU604_RS04980;Name=LU604_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04980;old_locus_tag=LU604_04980 NZ_CP089942.1 Protein Homology CDS 964193 964456 . + 0 ID=cds-WP_032191376.1;Parent=gene-LU604_RS04980;Dbxref=Genbank:WP_032191376.1;Name=WP_032191376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190699.1;locus_tag=LU604_RS04980;product=DUF2442 domain-containing protein;protein_id=WP_032191376.1;transl_table=11 NZ_CP089942.1 RefSeq gene 964504 965826 . - . ID=gene-LU604_RS04985;Name=LU604_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04985;old_locus_tag=LU604_04985 NZ_CP089942.1 Protein Homology CDS 964504 965826 . - 0 ID=cds-WP_233480049.1;Parent=gene-LU604_RS04985;Dbxref=Genbank:WP_233480049.1;Name=WP_233480049.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU604_RS04985;product=IS4 family transposase;protein_id=WP_233480049.1;transl_table=11 NZ_CP089942.1 RefSeq gene 966021 966617 . + . ID=gene-LU604_RS04990;Name=LU604_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04990;old_locus_tag=LU604_04990 NZ_CP089942.1 Protein Homology CDS 966021 966617 . + 0 ID=cds-WP_233480050.1;Parent=gene-LU604_RS04990;Dbxref=Genbank:WP_233480050.1;Name=WP_233480050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190700.1;locus_tag=LU604_RS04990;product=PilL N-terminal domain-containing protein;protein_id=WP_233480050.1;transl_table=11 NZ_CP089942.1 RefSeq gene 966614 967336 . + . ID=gene-LU604_RS04995;Name=LU604_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS04995;old_locus_tag=LU604_04995 NZ_CP089942.1 Protein Homology CDS 966614 967336 . + 0 ID=cds-WP_233480051.1;Parent=gene-LU604_RS04995;Dbxref=Genbank:WP_233480051.1;Name=WP_233480051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016151307.1;locus_tag=LU604_RS04995;product=hypothetical protein;protein_id=WP_233480051.1;transl_table=11 NZ_CP089942.1 RefSeq gene 967343 968047 . + . ID=gene-LU604_RS05000;Name=LU604_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05000;old_locus_tag=LU604_05000 NZ_CP089942.1 Protein Homology CDS 967343 968047 . + 0 ID=cds-WP_233480052.1;Parent=gene-LU604_RS05000;Dbxref=Genbank:WP_233480052.1;Name=WP_233480052.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006785960.1;locus_tag=LU604_RS05000;product=TIGR03759 family integrating conjugative element protein;protein_id=WP_233480052.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 968548 969944 . + . ID=gene-LU604_RS05005;Name=traD;gbkey=Gene;gene=traD;gene_biotype=pseudogene;locus_tag=LU604_RS05005;old_locus_tag=LU604_05005;partial=true;pseudo=true;start_range=.,968548 NZ_CP089942.1 Protein Homology CDS 968548 969944 . + 0 ID=cds-LU604_RS05005;Parent=gene-LU604_RS05005;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001510361.1;locus_tag=LU604_RS05005;partial=true;product=type IV conjugative transfer system coupling protein TraD;pseudo=true;start_range=.,968548;transl_table=11 NZ_CP089942.1 RefSeq gene 969937 970695 . + . ID=gene-LU604_RS05010;Name=LU604_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05010;old_locus_tag=LU604_05010 NZ_CP089942.1 Protein Homology CDS 969937 970695 . + 0 ID=cds-WP_233480053.1;Parent=gene-LU604_RS05010;Dbxref=Genbank:WP_233480053.1;Name=WP_233480053.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190708.1;locus_tag=LU604_RS05010;product=TIGR03747 family integrating conjugative element membrane protein;protein_id=WP_233480053.1;transl_table=11 NZ_CP089942.1 RefSeq gene 970796 971017 . - . ID=gene-LU604_RS05015;Name=LU604_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05015;old_locus_tag=LU604_05015 NZ_CP089942.1 Protein Homology CDS 970796 971017 . - 0 ID=cds-WP_233480054.1;Parent=gene-LU604_RS05015;Dbxref=Genbank:WP_233480054.1;Name=WP_233480054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001498920.1;locus_tag=LU604_RS05015;product=hypothetical protein;protein_id=WP_233480054.1;transl_table=11 NZ_CP089942.1 RefSeq gene 971358 972119 . - . ID=gene-LU604_RS05020;Name=LU604_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05020;old_locus_tag=LU604_05020 NZ_CP089942.1 Protein Homology CDS 971358 972119 . - 0 ID=cds-WP_233480055.1;Parent=gene-LU604_RS05020;Dbxref=Genbank:WP_233480055.1;Name=WP_233480055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838580.1;locus_tag=LU604_RS05020;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_233480055.1;transl_table=11 NZ_CP089942.1 RefSeq gene 972121 973107 . - . ID=gene-LU604_RS05025;Name=LU604_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05025;old_locus_tag=LU604_05025 NZ_CP089942.1 Protein Homology CDS 972121 973107 . - 0 ID=cds-WP_233480056.1;Parent=gene-LU604_RS05025;Dbxref=Genbank:WP_233480056.1;Name=WP_233480056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059575.1;locus_tag=LU604_RS05025;product=D-threonate 4-phosphate dehydrogenase;protein_id=WP_233480056.1;transl_table=11 NZ_CP089942.1 RefSeq gene 973100 974335 . - . ID=gene-LU604_RS05030;Name=LU604_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05030;old_locus_tag=LU604_05030 NZ_CP089942.1 Protein Homology CDS 973100 974335 . - 0 ID=cds-WP_233480057.1;Parent=gene-LU604_RS05030;Dbxref=Genbank:WP_233480057.1;Name=WP_233480057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238327.1;locus_tag=LU604_RS05030;product=four-carbon acid sugar kinase family protein;protein_id=WP_233480057.1;transl_table=11 NZ_CP089942.1 RefSeq gene 974512 975651 . + . ID=gene-LU604_RS05035;Name=LU604_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05035;old_locus_tag=LU604_05035 NZ_CP089942.1 Protein Homology CDS 974512 975651 . + 0 ID=cds-WP_233480058.1;Parent=gene-LU604_RS05035;Dbxref=Genbank:WP_233480058.1;Name=WP_233480058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456708.1;locus_tag=LU604_RS05035;product=iron-containing alcohol dehydrogenase;protein_id=WP_233480058.1;transl_table=11 NZ_CP089942.1 RefSeq gene 975673 976557 . + . ID=gene-LU604_RS05040;Name=LU604_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05040;old_locus_tag=LU604_05040 NZ_CP089942.1 Protein Homology CDS 975673 976557 . + 0 ID=cds-WP_233480059.1;Parent=gene-LU604_RS05040;Dbxref=Genbank:WP_233480059.1;Name=WP_233480059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014604601.1;locus_tag=LU604_RS05040;product=dihydrodipicolinate synthase family protein;protein_id=WP_233480059.1;transl_table=11 NZ_CP089942.1 RefSeq gene 976633 978057 . + . ID=gene-LU604_RS05045;Name=LU604_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05045;old_locus_tag=LU604_05045 NZ_CP089942.1 Protein Homology CDS 976633 978057 . + 0 ID=cds-WP_233480060.1;Parent=gene-LU604_RS05045;Dbxref=Genbank:WP_233480060.1;Name=WP_233480060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014070281.1;locus_tag=LU604_RS05045;product=sodium:solute symporter family protein;protein_id=WP_233480060.1;transl_table=11 NZ_CP089942.1 RefSeq gene 978059 979222 . + . ID=gene-LU604_RS05050;Name=LU604_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05050;old_locus_tag=LU604_05050 NZ_CP089942.1 Protein Homology CDS 978059 979222 . + 0 ID=cds-WP_233480061.1;Parent=gene-LU604_RS05050;Dbxref=Genbank:WP_233480061.1;Name=WP_233480061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014070280.1;locus_tag=LU604_RS05050;product=exo-alpha-sialidase;protein_id=WP_233480061.1;transl_table=11 NZ_CP089942.1 RefSeq gene 979219 979689 . + . ID=gene-LU604_RS05055;Name=LU604_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05055;old_locus_tag=LU604_05055 NZ_CP089942.1 Protein Homology CDS 979219 979689 . + 0 ID=cds-WP_233480062.1;Parent=gene-LU604_RS05055;Dbxref=Genbank:WP_233480062.1;Name=WP_233480062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456704.1;locus_tag=LU604_RS05055;product=YhcH/YjgK/YiaL family protein;protein_id=WP_233480062.1;transl_table=11 NZ_CP089942.1 RefSeq gene 979692 980369 . + . ID=gene-LU604_RS05060;Name=LU604_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05060;old_locus_tag=LU604_05060 NZ_CP089942.1 Protein Homology CDS 979692 980369 . + 0 ID=cds-WP_233480063.1;Parent=gene-LU604_RS05060;Dbxref=Genbank:WP_233480063.1;Name=WP_233480063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456703.1;locus_tag=LU604_RS05060;product=SDR family oxidoreductase;protein_id=WP_233480063.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 980477 980695 . + . ID=gene-LU604_RS05065;Name=LU604_RS05065;end_range=980695,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05065;old_locus_tag=LU604_05065;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 980477 980695 . + 0 ID=cds-LU604_RS05065;Parent=gene-LU604_RS05065;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=980695,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005503731.1;locus_tag=LU604_RS05065;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 980927 981268 . + . ID=gene-LU604_RS05070;Name=LU604_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05070;old_locus_tag=LU604_05070 NZ_CP089942.1 Protein Homology CDS 980927 981268 . + 0 ID=cds-WP_233480064.1;Parent=gene-LU604_RS05070;Dbxref=Genbank:WP_233480064.1;Name=WP_233480064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808261.1;locus_tag=LU604_RS05070;product=RAQPRD family integrative conjugative element protein;protein_id=WP_233480064.1;transl_table=11 NZ_CP089942.1 RefSeq gene 981268 981510 . + . ID=gene-LU604_RS05075;Name=LU604_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05075;old_locus_tag=LU604_05075 NZ_CP089942.1 Protein Homology CDS 981268 981510 . + 0 ID=cds-WP_016190712.1;Parent=gene-LU604_RS05075;Dbxref=Genbank:WP_016190712.1;Name=WP_016190712.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190712.1;locus_tag=LU604_RS05075;product=TIGR03758 family integrating conjugative element protein;protein_id=WP_016190712.1;transl_table=11 NZ_CP089942.1 RefSeq gene 981541 981927 . + . ID=gene-LU604_RS05080;Name=LU604_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05080;old_locus_tag=LU604_05080 NZ_CP089942.1 Protein Homology CDS 981541 981927 . + 0 ID=cds-WP_233480065.1;Parent=gene-LU604_RS05080;Dbxref=Genbank:WP_233480065.1;Name=WP_233480065.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808260.1;locus_tag=LU604_RS05080;product=TIGR03745 family integrating conjugative element membrane protein;protein_id=WP_233480065.1;transl_table=11 NZ_CP089942.1 RefSeq gene 981937 982293 . + . ID=gene-LU604_RS05085;Name=LU604_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05085;old_locus_tag=LU604_05085 NZ_CP089942.1 Protein Homology CDS 981937 982293 . + 0 ID=cds-WP_016190714.1;Parent=gene-LU604_RS05085;Dbxref=Genbank:WP_016190714.1;Name=WP_016190714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190714.1;locus_tag=LU604_RS05085;product=TIGR03750 family conjugal transfer protein;protein_id=WP_016190714.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 982290 982949 . + . ID=gene-LU604_RS05090;Name=LU604_RS05090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05090;old_locus_tag=LU604_05090;pseudo=true NZ_CP089942.1 Protein Homology CDS 982290 982949 . + 0 ID=cds-LU604_RS05090;Parent=gene-LU604_RS05090;Note=internal stop;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869791.1;locus_tag=LU604_RS05090;product=TIGR03746 family integrating conjugative element protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 982949 983233 . + . ID=gene-LU604_RS05095;Name=LU604_RS05095;end_range=983233,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05095;old_locus_tag=LU604_05095;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 982949 983233 . + 0 ID=cds-LU604_RS05095;Parent=gene-LU604_RS05095;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=983233,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190716.1;locus_tag=LU604_RS05095;partial=true;product=DUF3438 family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 983229 983774 . + . ID=gene-LU604_RS05100;Name=LU604_RS05100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05100;old_locus_tag=LU604_05100;partial=true;pseudo=true;start_range=.,983229 NZ_CP089942.1 Protein Homology CDS 983229 983774 . + 0 ID=cds-LU604_RS05100;Parent=gene-LU604_RS05100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808257.1;locus_tag=LU604_RS05100;partial=true;product=TIGR03752 family integrating conjugative element protein;pseudo=true;start_range=.,983229;transl_table=11 NZ_CP089942.1 RefSeq gene 984284 984622 . + . ID=gene-LU604_RS05105;Name=LU604_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05105;old_locus_tag=LU604_05105 NZ_CP089942.1 Protein Homology CDS 984284 984622 . + 0 ID=cds-WP_233480743.1;Parent=gene-LU604_RS05105;Dbxref=Genbank:WP_233480743.1;Name=WP_233480743.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007885635.1;locus_tag=LU604_RS05105;product=TIGR03751 family conjugal transfer lipoprotein;protein_id=WP_233480743.1;transl_table=11 NZ_CP089942.1 RefSeq gene 984622 987486 . + . ID=gene-LU604_RS05110;Name=LU604_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05110;old_locus_tag=LU604_05110 NZ_CP089942.1 Protein Homology CDS 984622 987486 . + 0 ID=cds-WP_233480744.1;Parent=gene-LU604_RS05110;Dbxref=Genbank:WP_233480744.1;Name=WP_233480744.1;Ontology_term=GO:0008150,GO:0005524,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=ATP binding|0005524||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869795.1;locus_tag=LU604_RS05110;product=conjugative transfer ATPase;protein_id=WP_233480744.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 987483 987865 . + . ID=gene-LU604_RS05115;Name=LU604_RS05115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05115;old_locus_tag=LU604_05115;pseudo=true NZ_CP089942.1 Protein Homology CDS 987483 987865 . + 0 ID=cds-LU604_RS05115;Parent=gene-LU604_RS05115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190720.1;locus_tag=LU604_RS05115;product=acetyltransferase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 987993 988514 . + . ID=gene-LU604_RS05120;Name=LU604_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05120;old_locus_tag=LU604_05120 NZ_CP089942.1 GeneMarkS-2+ CDS 987993 988514 . + 0 ID=cds-WP_233481520.1;Parent=gene-LU604_RS05120;Dbxref=Genbank:WP_233481520.1;Name=WP_233481520.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05120;product=hypothetical protein;protein_id=WP_233481520.1;transl_table=11 NZ_CP089942.1 RefSeq gene 988577 991789 . + . ID=gene-LU604_RS05125;Name=LU604_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05125;old_locus_tag=LU604_05125 NZ_CP089942.1 GeneMarkS-2+ CDS 988577 991789 . + 0 ID=cds-WP_233481521.1;Parent=gene-LU604_RS05125;Dbxref=Genbank:WP_233481521.1;Name=WP_233481521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05125;product=DNA-binding protein;protein_id=WP_233481521.1;transl_table=11 NZ_CP089942.1 RefSeq gene 992094 992495 . + . ID=gene-LU604_RS05130;Name=LU604_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05130;old_locus_tag=LU604_05130 NZ_CP089942.1 Protein Homology CDS 992094 992495 . + 0 ID=cds-WP_032191401.1;Parent=gene-LU604_RS05130;Dbxref=Genbank:WP_032191401.1;Name=WP_032191401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115523.1;locus_tag=LU604_RS05130;product=TIGR03757 family integrating conjugative element protein;protein_id=WP_032191401.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 992492 993549 . + . ID=gene-LU604_RS05135;Name=LU604_RS05135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05135;old_locus_tag=LU604_05135;pseudo=true NZ_CP089942.1 Protein Homology CDS 992492 993549 . + 0 ID=cds-LU604_RS05135;Parent=gene-LU604_RS05135;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006327938.1;locus_tag=LU604_RS05135;product=integrase domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 993550 993837 . + . ID=gene-LU604_RS05140;Name=LU604_RS05140;end_range=993837,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05140;old_locus_tag=LU604_05140;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 993550 993837 . + 0 ID=cds-LU604_RS05140;Parent=gene-LU604_RS05140;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=993837,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017400897.1;locus_tag=LU604_RS05140;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 993894 994934 . - . ID=gene-LU604_RS05145;Name=LU604_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05145;old_locus_tag=LU604_05145 NZ_CP089942.1 Protein Homology CDS 993894 994934 . - 0 ID=cds-WP_233478553.1-9;Parent=gene-LU604_RS05145;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS05145;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 995260 995475 . - . ID=gene-LU604_RS05150;Name=LU604_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05150;old_locus_tag=LU604_05150 NZ_CP089942.1 GeneMarkS-2+ CDS 995260 995475 . - 0 ID=cds-WP_233480067.1;Parent=gene-LU604_RS05150;Dbxref=Genbank:WP_233480067.1;Name=WP_233480067.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05150;product=hypothetical protein;protein_id=WP_233480067.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 995453 996485 . - . ID=gene-LU604_RS05155;Name=LU604_RS05155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05155;old_locus_tag=LU604_05155;pseudo=true NZ_CP089942.1 Protein Homology CDS 995453 996485 . - 0 ID=cds-LU604_RS05155;Parent=gene-LU604_RS05155;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS05155;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 996589 996966 . + . ID=gene-LU604_RS05160;Name=LU604_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05160;old_locus_tag=LU604_05160 NZ_CP089942.1 Protein Homology CDS 996589 996966 . + 0 ID=cds-WP_233480069.1;Parent=gene-LU604_RS05160;Dbxref=Genbank:WP_233480069.1;Name=WP_233480069.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024698.2;locus_tag=LU604_RS05160;product=GNAT family N-acetyltransferase;protein_id=WP_233480069.1;transl_table=11 NZ_CP089942.1 RefSeq gene 997110 997430 . - . ID=gene-LU604_RS05165;Name=LU604_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05165;old_locus_tag=LU604_05165 NZ_CP089942.1 Protein Homology CDS 997110 997430 . - 0 ID=cds-WP_233480070.1;Parent=gene-LU604_RS05165;Dbxref=Genbank:WP_233480070.1;Name=WP_233480070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669270.1;locus_tag=LU604_RS05165;product=contact-dependent growth inhibition system immunity protein;protein_id=WP_233480070.1;transl_table=11 NZ_CP089942.1 RefSeq gene 997433 998266 . - . ID=gene-LU604_RS05170;Name=LU604_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05170;old_locus_tag=LU604_05170 NZ_CP089942.1 Protein Homology CDS 997433 998266 . - 0 ID=cds-WP_233480071.1;Parent=gene-LU604_RS05170;Dbxref=Genbank:WP_233480071.1;Name=WP_233480071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168499.1;locus_tag=LU604_RS05170;product=hypothetical protein;protein_id=WP_233480071.1;transl_table=11 NZ_CP089942.1 RefSeq gene 998459 998821 . + . ID=gene-LU604_RS05175;Name=LU604_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05175;old_locus_tag=LU604_05175 NZ_CP089942.1 GeneMarkS-2+ CDS 998459 998821 . + 0 ID=cds-WP_233480072.1;Parent=gene-LU604_RS05175;Dbxref=Genbank:WP_233480072.1;Name=WP_233480072.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05175;product=hypothetical protein;protein_id=WP_233480072.1;transl_table=11 NZ_CP089942.1 RefSeq gene 998832 999683 . - . ID=gene-LU604_RS05180;Name=LU604_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05180;old_locus_tag=LU604_05180 NZ_CP089942.1 Protein Homology CDS 998832 999683 . - 0 ID=cds-WP_233480073.1;Parent=gene-LU604_RS05180;Dbxref=Genbank:WP_233480073.1;Name=WP_233480073.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025354.2;locus_tag=LU604_RS05180;product=DUF4225 domain-containing protein;protein_id=WP_233480073.1;transl_table=11 NZ_CP089942.1 RefSeq gene 999699 1000163 . - . ID=gene-LU604_RS05185;Name=LU604_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05185;old_locus_tag=LU604_05185 NZ_CP089942.1 Protein Homology CDS 999699 1000163 . - 0 ID=cds-WP_233480074.1;Parent=gene-LU604_RS05185;Dbxref=Genbank:WP_233480074.1;Name=WP_233480074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204493.1;locus_tag=LU604_RS05185;product=type VI secretion system tube protein Hcp;protein_id=WP_233480074.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1000328 1000675 . + . ID=gene-LU604_RS05190;Name=LU604_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05190;old_locus_tag=LU604_05190 NZ_CP089942.1 Protein Homology CDS 1000328 1000675 . + 0 ID=cds-WP_233480075.1;Parent=gene-LU604_RS05190;Dbxref=Genbank:WP_233480075.1;Name=WP_233480075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191732.1;locus_tag=LU604_RS05190;product=RAQPRD family integrative conjugative element protein;protein_id=WP_233480075.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1000675 1000917 . + . ID=gene-LU604_RS05195;Name=LU604_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05195;old_locus_tag=LU604_05195 NZ_CP089942.1 Protein Homology CDS 1000675 1000917 . + 0 ID=cds-WP_233480076.1;Parent=gene-LU604_RS05195;Dbxref=Genbank:WP_233480076.1;Name=WP_233480076.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016260100.1;locus_tag=LU604_RS05195;product=TIGR03758 family integrating conjugative element protein;protein_id=WP_233480076.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1000956 1001336 . + . ID=gene-LU604_RS05200;Name=LU604_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05200;old_locus_tag=LU604_05200 NZ_CP089942.1 Protein Homology CDS 1000956 1001336 . + 0 ID=cds-WP_233481522.1;Parent=gene-LU604_RS05200;Dbxref=Genbank:WP_233481522.1;Name=WP_233481522.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808260.1;locus_tag=LU604_RS05200;product=TIGR03745 family integrating conjugative element membrane protein;protein_id=WP_233481522.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1001349 1001705 . + . ID=gene-LU604_RS05205;Name=LU604_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05205;old_locus_tag=LU604_05205 NZ_CP089942.1 Protein Homology CDS 1001349 1001705 . + 0 ID=cds-WP_233480078.1;Parent=gene-LU604_RS05205;Dbxref=Genbank:WP_233480078.1;Name=WP_233480078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001422136.1;locus_tag=LU604_RS05205;product=TIGR03750 family conjugal transfer protein;protein_id=WP_233480078.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1001702 1002373 . + . ID=gene-LU604_RS05210;Name=LU604_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05210;old_locus_tag=LU604_05210 NZ_CP089942.1 Protein Homology CDS 1001702 1002373 . + 0 ID=cds-WP_233480079.1;Parent=gene-LU604_RS05210;Dbxref=Genbank:WP_233480079.1;Name=WP_233480079.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808259.1;locus_tag=LU604_RS05210;product=TIGR03746 family integrating conjugative element protein;protein_id=WP_233480079.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1002373 1003296 . + . ID=gene-LU604_RS05215;Name=LU604_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05215;old_locus_tag=LU604_05215 NZ_CP089942.1 Protein Homology CDS 1002373 1003296 . + 0 ID=cds-WP_233480080.1;Parent=gene-LU604_RS05215;Dbxref=Genbank:WP_233480080.1;Name=WP_233480080.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808258.1;locus_tag=LU604_RS05215;product=TIGR03749 family integrating conjugative element protein;protein_id=WP_233480080.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1003286 1004770 . + . ID=gene-LU604_RS05220;Name=LU604_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05220;old_locus_tag=LU604_05220 NZ_CP089942.1 Protein Homology CDS 1003286 1004770 . + 0 ID=cds-WP_233480081.1;Parent=gene-LU604_RS05220;Dbxref=Genbank:WP_233480081.1;Name=WP_233480081.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808257.1;locus_tag=LU604_RS05220;product=TIGR03752 family integrating conjugative element protein;protein_id=WP_233480081.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1004806 1005195 . + . ID=gene-LU604_RS05225;Name=LU604_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05225;old_locus_tag=LU604_05225 NZ_CP089942.1 Protein Homology CDS 1004806 1005195 . + 0 ID=cds-WP_233480745.1;Parent=gene-LU604_RS05225;Dbxref=Genbank:WP_233480745.1;Name=WP_233480745.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114241.1;locus_tag=LU604_RS05225;product=TIGR03751 family conjugal transfer lipoprotein;protein_id=WP_233480745.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1005294 1008039 . + . ID=gene-LU604_RS05230;Name=LU604_RS05230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05230;old_locus_tag=LU604_05230;pseudo=true NZ_CP089942.1 Protein Homology CDS 1005294 1008039 . + 0 ID=cds-LU604_RS05230;Parent=gene-LU604_RS05230;Note=frameshifted;Ontology_term=GO:0008150,GO:0005524,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=ATP binding|0005524||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015056516.1;locus_tag=LU604_RS05230;product=conjugative transfer ATPase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1008036 1008428 . + . ID=gene-LU604_RS05235;Name=LU604_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05235;old_locus_tag=LU604_05235 NZ_CP089942.1 Protein Homology CDS 1008036 1008428 . + 0 ID=cds-WP_233480082.1;Parent=gene-LU604_RS05235;Dbxref=Genbank:WP_233480082.1;Name=WP_233480082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004805.1;locus_tag=LU604_RS05235;product=acetyltransferase;protein_id=WP_233480082.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1008512 1009003 . - . ID=gene-LU604_RS05240;Name=tssD;gbkey=Gene;gene=tssD;gene_biotype=protein_coding;locus_tag=LU604_RS05240;old_locus_tag=LU604_05240 NZ_CP089942.1 Protein Homology CDS 1008512 1009003 . - 0 ID=cds-WP_233480746.1;Parent=gene-LU604_RS05240;Dbxref=Genbank:WP_233480746.1;Name=WP_233480746.1;Ontology_term=GO:0003674;gbkey=CDS;gene=tssD;go_function=molecular_function|0003674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902160.1;locus_tag=LU604_RS05240;product=type VI secretion system tube protein TssD;protein_id=WP_233480746.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1009252 1009770 . - . ID=gene-LU604_RS05245;Name=LU604_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05245;old_locus_tag=LU604_05245 NZ_CP089942.1 Protein Homology CDS 1009252 1009770 . - 0 ID=cds-WP_233480083.1;Parent=gene-LU604_RS05245;Dbxref=Genbank:WP_233480083.1;Name=WP_233480083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192010.1;locus_tag=LU604_RS05245;product=DUF2778 domain-containing protein;protein_id=WP_233480083.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1010102 1010371 . - . ID=gene-LU604_RS05250;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS05250;old_locus_tag=LU604_05250;pseudo=true NZ_CP089942.1 Protein Homology CDS 1010102 1010371 . - 0 ID=cds-LU604_RS05250;Parent=gene-LU604_RS05250;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF013921.2;locus_tag=LU604_RS05250;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1010363 1010614 . - . ID=gene-LU604_RS05255;Name=LU604_RS05255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05255;old_locus_tag=LU604_05255;partial=true;pseudo=true;start_range=.,1010363 NZ_CP089942.1 Protein Homology CDS 1010363 1010614 . - 0 ID=cds-LU604_RS05255;Parent=gene-LU604_RS05255;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857153.1;locus_tag=LU604_RS05255;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;start_range=.,1010363;transl_table=11 NZ_CP089942.1 RefSeq gene 1010856 1011389 . + . ID=gene-LU604_RS05260;Name=LU604_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05260;old_locus_tag=LU604_05260 NZ_CP089942.1 Protein Homology CDS 1010856 1011389 . + 0 ID=cds-WP_233480084.1;Parent=gene-LU604_RS05260;Dbxref=Genbank:WP_233480084.1;Name=WP_233480084.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024867.2;locus_tag=LU604_RS05260;product=ATP-binding protein;protein_id=WP_233480084.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1011582 1012622 . + . ID=gene-LU604_RS05265;Name=LU604_RS05265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05265;old_locus_tag=LU604_05265;pseudo=true NZ_CP089942.1 Protein Homology CDS 1011582 1012622 . + 0 ID=cds-LU604_RS05265;Parent=gene-LU604_RS05265;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS05265;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1012765 1013082 . + . ID=gene-LU604_RS05270;Name=LU604_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05270;old_locus_tag=LU604_05270 NZ_CP089942.1 GeneMarkS-2+ CDS 1012765 1013082 . + 0 ID=cds-WP_233480085.1;Parent=gene-LU604_RS05270;Dbxref=Genbank:WP_233480085.1;Name=WP_233480085.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05270;product=hypothetical protein;protein_id=WP_233480085.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1013151 1013783 . + . ID=gene-LU604_RS05275;Name=LU604_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05275;old_locus_tag=LU604_05275 NZ_CP089942.1 Protein Homology CDS 1013151 1013783 . + 0 ID=cds-WP_233480086.1;Parent=gene-LU604_RS05275;Dbxref=Genbank:WP_233480086.1;Name=WP_233480086.1;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF025056.2;locus_tag=LU604_RS05275;product=TIR domain-containing protein;protein_id=WP_233480086.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1013790 1014098 . + . ID=gene-LU604_RS05280;Name=LU604_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05280;old_locus_tag=LU604_05280 NZ_CP089942.1 GeneMarkS-2+ CDS 1013790 1014098 . + 0 ID=cds-WP_233480087.1;Parent=gene-LU604_RS05280;Dbxref=Genbank:WP_233480087.1;Name=WP_233480087.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05280;product=hypothetical protein;protein_id=WP_233480087.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1014291 1014689 . + . ID=gene-LU604_RS05285;Name=LU604_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05285;old_locus_tag=LU604_05285 NZ_CP089942.1 Protein Homology CDS 1014291 1014689 . + 0 ID=cds-WP_233480747.1;Parent=gene-LU604_RS05285;Dbxref=Genbank:WP_233480747.1;Name=WP_233480747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115523.1;locus_tag=LU604_RS05285;product=TIGR03757 family integrating conjugative element protein;protein_id=WP_233480747.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1014689 1015667 . + . ID=gene-LU604_RS05290;Name=LU604_RS05290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05290;old_locus_tag=LU604_05290;pseudo=true NZ_CP089942.1 Protein Homology CDS 1014689 1015667 . + 0 ID=cds-LU604_RS05290;Parent=gene-LU604_RS05290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115521.1;locus_tag=LU604_RS05290;product=TIGR03756 family integrating conjugative element protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1015719 1017146 . + . ID=gene-LU604_RS05295;Name=LU604_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05295;old_locus_tag=LU604_05295 NZ_CP089942.1 Protein Homology CDS 1015719 1017146 . + 0 ID=cds-WP_233480748.1;Parent=gene-LU604_RS05295;Dbxref=Genbank:WP_233480748.1;Name=WP_233480748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190724.1;locus_tag=LU604_RS05295;product=integrating conjugative element protein;protein_id=WP_233480748.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1017156 1017494 . + . ID=gene-LU604_RS05300;Name=LU604_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05300;old_locus_tag=LU604_05300 NZ_CP089942.1 Protein Homology CDS 1017156 1017494 . + 0 ID=cds-WP_233480749.1;Parent=gene-LU604_RS05300;Dbxref=Genbank:WP_233480749.1;Name=WP_233480749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115513.1;locus_tag=LU604_RS05300;product=hypothetical protein;protein_id=WP_233480749.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1017491 1019026 . + . ID=gene-LU604_RS05305;Name=LU604_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05305;old_locus_tag=LU604_05305 NZ_CP089942.1 Protein Homology CDS 1017491 1019026 . + 0 ID=cds-WP_233481523.1;Parent=gene-LU604_RS05305;Dbxref=Genbank:WP_233481523.1;Name=WP_233481523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060283.1;locus_tag=LU604_RS05305;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=WP_233481523.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1019060 1019350 . - . ID=gene-LU604_RS05310;Name=LU604_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05310;old_locus_tag=LU604_05310 NZ_CP089942.1 GeneMarkS-2+ CDS 1019060 1019350 . - 0 ID=cds-WP_233480089.1;Parent=gene-LU604_RS05310;Dbxref=Genbank:WP_233480089.1;Name=WP_233480089.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05310;product=hypothetical protein;protein_id=WP_233480089.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1019657 1020160 . + . ID=gene-LU604_RS05315;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=LU604_RS05315;old_locus_tag=LU604_05315 NZ_CP089942.1 Protein Homology CDS 1019657 1020160 . + 0 ID=cds-WP_233480090.1;Parent=gene-LU604_RS05315;Dbxref=Genbank:WP_233480090.1;Name=WP_233480090.1;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016151329.1;locus_tag=LU604_RS05315;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_233480090.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1020163 1021436 . + . ID=gene-LU604_RS05320;Name=umuC;gbkey=Gene;gene=umuC;gene_biotype=pseudogene;locus_tag=LU604_RS05320;old_locus_tag=LU604_05320;pseudo=true NZ_CP089942.1 Protein Homology CDS 1020163 1021436 . + 0 ID=cds-LU604_RS05320;Parent=gene-LU604_RS05320;Note=frameshifted;Ontology_term=GO:0006281,GO:0003684;gbkey=CDS;gene=umuC;go_function=damaged DNA binding|0003684||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015672003.1;locus_tag=LU604_RS05320;product=translesion error-prone DNA polymerase V subunit UmuC;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1021524 1022159 . + . ID=gene-LU604_RS05325;Name=LU604_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05325;old_locus_tag=LU604_05325 NZ_CP089942.1 GeneMarkS-2+ CDS 1021524 1022159 . + 0 ID=cds-WP_233481524.1;Parent=gene-LU604_RS05325;Dbxref=Genbank:WP_233481524.1;Name=WP_233481524.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05325;product=hypothetical protein;protein_id=WP_233481524.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1023035 1024234 . - . ID=gene-LU604_RS05330;Name=LU604_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05330;old_locus_tag=LU604_05330 NZ_CP089942.1 Protein Homology CDS 1023035 1024234 . - 0 ID=cds-WP_233481525.1;Parent=gene-LU604_RS05330;Dbxref=Genbank:WP_233481525.1;Name=WP_233481525.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS05330;product=IS91 family transposase;protein_id=WP_233481525.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1024243 1024421 . - . ID=gene-LU604_RS05335;Name=LU604_RS05335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05335;old_locus_tag=LU604_05335;pseudo=true NZ_CP089942.1 Protein Homology CDS 1024243 1024421 . - 0 ID=cds-LU604_RS05335;Parent=gene-LU604_RS05335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322936.1;locus_tag=LU604_RS05335;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1024854 1025360 . - . ID=gene-LU604_RS05340;Name=LU604_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05340;old_locus_tag=LU604_05340 NZ_CP089942.1 Protein Homology CDS 1024854 1025360 . - 0 ID=cds-WP_046372219.1;Parent=gene-LU604_RS05340;Dbxref=Genbank:WP_046372219.1;Name=WP_046372219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000654195.1;locus_tag=LU604_RS05340;product=YrhA family protein;protein_id=WP_046372219.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1025370 1026509 . - . ID=gene-LU604_RS05345;Name=LU604_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05345;old_locus_tag=LU604_05345 NZ_CP089942.1 Protein Homology CDS 1025370 1026509 . - 0 ID=cds-WP_233480092.1;Parent=gene-LU604_RS05345;Dbxref=Genbank:WP_233480092.1;Name=WP_233480092.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186798.1;locus_tag=LU604_RS05345;product=HNH endonuclease;protein_id=WP_233480092.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1026807 1027667 . + . ID=gene-LU604_RS05350;Name=LU604_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05350;old_locus_tag=LU604_05350 NZ_CP089942.1 Protein Homology CDS 1026807 1027667 . + 0 ID=cds-WP_233480093.1;Parent=gene-LU604_RS05350;Dbxref=Genbank:WP_233480093.1;Name=WP_233480093.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024977.2;locus_tag=LU604_RS05350;product=ATP-binding protein;protein_id=WP_233480093.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1027630 1028250 . + . ID=gene-LU604_RS05355;Name=LU604_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05355;old_locus_tag=LU604_05355 NZ_CP089942.1 GeneMarkS-2+ CDS 1027630 1028250 . + 0 ID=cds-WP_233480094.1;Parent=gene-LU604_RS05355;Dbxref=Genbank:WP_233480094.1;Name=WP_233480094.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05355;product=hypothetical protein;protein_id=WP_233480094.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1028421 1028825 . + . ID=gene-LU604_RS05360;Name=LU604_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05360;old_locus_tag=LU604_05360 NZ_CP089942.1 Protein Homology CDS 1028421 1028825 . + 0 ID=cds-WP_233480095.1;Parent=gene-LU604_RS05360;Dbxref=Genbank:WP_233480095.1;Name=WP_233480095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015701150.1;locus_tag=LU604_RS05360;product=TIGR03757 family integrating conjugative element protein;protein_id=WP_233480095.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1028822 1029793 . + . ID=gene-LU604_RS05365;Name=LU604_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05365;old_locus_tag=LU604_05365 NZ_CP089942.1 Protein Homology CDS 1028822 1029793 . + 0 ID=cds-WP_233479711.1-2;Parent=gene-LU604_RS05365;Dbxref=Genbank:WP_233479711.1;Name=WP_233479711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372625.1;locus_tag=LU604_RS05365;product=TIGR03756 family integrating conjugative element protein;protein_id=WP_233479711.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1029805 1030149 . + . ID=gene-LU604_RS05370;Name=LU604_RS05370;end_range=1030149,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05370;old_locus_tag=LU604_05370;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1029805 1030149 . + 0 ID=cds-LU604_RS05370;Parent=gene-LU604_RS05370;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1030149,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192758.1;locus_tag=LU604_RS05370;partial=true;product=integrating conjugative element protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1030140 1030763 . + . ID=gene-LU604_RS05375;Name=LU604_RS05375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05375;old_locus_tag=LU604_05375;partial=true;pseudo=true;start_range=.,1030140 NZ_CP089942.1 Protein Homology CDS 1030140 1030763 . + 0 ID=cds-LU604_RS05375;Parent=gene-LU604_RS05375;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105560.1;locus_tag=LU604_RS05375;partial=true;product=conjugal transfer protein TraG N-terminal domain-containing protein;pseudo=true;start_range=.,1030140;transl_table=11 NZ_CP089942.1 RefSeq gene 1030801 1031088 . - . ID=gene-LU604_RS05380;Name=LU604_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05380;old_locus_tag=LU604_05380 NZ_CP089942.1 Protein Homology CDS 1030801 1031088 . - 0 ID=cds-WP_233480096.1;Parent=gene-LU604_RS05380;Dbxref=Genbank:WP_233480096.1;Name=WP_233480096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193230.1;locus_tag=LU604_RS05380;product=hypothetical protein;protein_id=WP_233480096.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1031525 1032505 . + . ID=gene-LU604_RS05385;Name=LU604_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05385;old_locus_tag=LU604_05385 NZ_CP089942.1 Protein Homology CDS 1031525 1032505 . + 0 ID=cds-WP_233480097.1;Parent=gene-LU604_RS05385;Dbxref=Genbank:WP_233480097.1;Name=WP_233480097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193231.1;locus_tag=LU604_RS05385;product=hypothetical protein;protein_id=WP_233480097.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1033444 1034355 . + . ID=gene-LU604_RS05390;Name=LU604_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05390;old_locus_tag=LU604_05390 NZ_CP089942.1 Protein Homology CDS 1033444 1034355 . + 0 ID=cds-WP_233480098.1;Parent=gene-LU604_RS05390;Dbxref=Genbank:WP_233480098.1;Name=WP_233480098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012988007.1;locus_tag=LU604_RS05390;product=integrase domain-containing protein;protein_id=WP_233480098.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1034709 1034936 . + . ID=gene-LU604_RS05395;Name=LU604_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05395;old_locus_tag=LU604_05395 NZ_CP089942.1 GeneMarkS-2+ CDS 1034709 1034936 . + 0 ID=cds-WP_233481526.1;Parent=gene-LU604_RS05395;Dbxref=Genbank:WP_233481526.1;Name=WP_233481526.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05395;product=hypothetical protein;protein_id=WP_233481526.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1035830 1036138 . + . ID=gene-LU604_RS05400;Name=LU604_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05400;old_locus_tag=LU604_05400 NZ_CP089942.1 Protein Homology CDS 1035830 1036138 . + 0 ID=cds-WP_233480100.1;Parent=gene-LU604_RS05400;Dbxref=Genbank:WP_233480100.1;Name=WP_233480100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193234.1;locus_tag=LU604_RS05400;product=hypothetical protein;protein_id=WP_233480100.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1036218 1036829 . + . ID=gene-LU604_RS05405;Name=LU604_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05405;old_locus_tag=LU604_05405 NZ_CP089942.1 Protein Homology CDS 1036218 1036829 . + 0 ID=cds-WP_233479732.1-2;Parent=gene-LU604_RS05405;Dbxref=Genbank:WP_233479732.1;Name=WP_233479732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095235.1;locus_tag=LU604_RS05405;product=hypothetical protein;protein_id=WP_233479732.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1036977 1037928 . + . ID=gene-LU604_RS05410;Name=LU604_RS05410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05410;old_locus_tag=LU604_05410;pseudo=true NZ_CP089942.1 Protein Homology CDS 1036977 1037928 . + 0 ID=cds-LU604_RS05410;Parent=gene-LU604_RS05410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095237.1;locus_tag=LU604_RS05410;product=DUF1281 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1038056 1038763 . + . ID=gene-LU604_RS05415;Name=LU604_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05415;old_locus_tag=LU604_05415 NZ_CP089942.1 Protein Homology CDS 1038056 1038763 . + 0 ID=cds-WP_233481527.1;Parent=gene-LU604_RS05415;Dbxref=Genbank:WP_233481527.1;Name=WP_233481527.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869813.1;locus_tag=LU604_RS05415;product=N-6 DNA methylase;protein_id=WP_233481527.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1038936 1039370 . + . ID=gene-LU604_RS05420;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=LU604_RS05420;old_locus_tag=LU604_05420 NZ_CP089942.1 Protein Homology CDS 1038936 1039370 . + 0 ID=cds-WP_233480101.1;Parent=gene-LU604_RS05420;Dbxref=Genbank:WP_233480101.1;Name=WP_233480101.1;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606797.1;locus_tag=LU604_RS05420;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_233480101.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1039370 1039837 . + . ID=gene-LU604_RS05425;Name=LU604_RS05425;end_range=1039837,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05425;old_locus_tag=LU604_05425;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1039370 1039837 . + 0 ID=cds-LU604_RS05425;Parent=gene-LU604_RS05425;Note=binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1039837,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457616.1;locus_tag=LU604_RS05425;partial=true;product=DNA polymerase V subunit UmuC;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1039983 1041206 . - . ID=gene-LU604_RS05430;Name=LU604_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05430;old_locus_tag=LU604_05430 NZ_CP089942.1 Protein Homology CDS 1039983 1041206 . - 0 ID=cds-WP_233481528.1;Parent=gene-LU604_RS05430;Dbxref=Genbank:WP_233481528.1;Name=WP_233481528.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU604_RS05430;product=IS91 family transposase;protein_id=WP_233481528.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1041293 1041448 . + . ID=gene-LU604_RS05435;Name=LU604_RS05435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05435;old_locus_tag=LU604_05435;partial=true;pseudo=true;start_range=.,1041293 NZ_CP089942.1 Protein Homology CDS 1041293 1041448 . + 0 ID=cds-LU604_RS05435;Parent=gene-LU604_RS05435;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137421.1;locus_tag=LU604_RS05435;partial=true;product=MbeD family mobilization/exclusion protein;pseudo=true;start_range=.,1041293;transl_table=11 NZ_CP089942.1 RefSeq gene 1041669 1041908 . + . ID=gene-LU604_RS05440;Name=LU604_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05440;old_locus_tag=LU604_05440 NZ_CP089942.1 Protein Homology CDS 1041669 1041908 . + 0 ID=cds-WP_233480103.1;Parent=gene-LU604_RS05440;Dbxref=Genbank:WP_233480103.1;Name=WP_233480103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005168847.1;locus_tag=LU604_RS05440;product=hypothetical protein;protein_id=WP_233480103.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1041909 1042568 . - . ID=gene-LU604_RS05445;Name=LU604_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05445;old_locus_tag=LU604_05445 NZ_CP089942.1 Protein Homology CDS 1041909 1042568 . - 0 ID=cds-WP_233480104.1;Parent=gene-LU604_RS05445;Dbxref=Genbank:WP_233480104.1;Name=WP_233480104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190308.1;locus_tag=LU604_RS05445;product=hypothetical protein;protein_id=WP_233480104.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1043371 1043661 . - . ID=gene-LU604_RS05450;Name=LU604_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05450;old_locus_tag=LU604_05450 NZ_CP089942.1 GeneMarkS-2+ CDS 1043371 1043661 . - 0 ID=cds-WP_233480898.1;Parent=gene-LU604_RS05450;Dbxref=Genbank:WP_233480898.1;Name=WP_233480898.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05450;product=hypothetical protein;protein_id=WP_233480898.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1043588 1044379 . - . ID=gene-LU604_RS05455;Name=LU604_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05455;old_locus_tag=LU604_05455 NZ_CP089942.1 Protein Homology CDS 1043588 1044379 . - 0 ID=cds-WP_233481529.1;Parent=gene-LU604_RS05455;Dbxref=Genbank:WP_233481529.1;Name=WP_233481529.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS05455;product=transposase;protein_id=WP_233481529.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1044400 1044597 . - . ID=gene-LU604_RS05460;Name=LU604_RS05460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05460;old_locus_tag=LU604_05460;partial=true;pseudo=true;start_range=.,1044400 NZ_CP089942.1 Protein Homology CDS 1044400 1044597 . - 0 ID=cds-LU604_RS05460;Parent=gene-LU604_RS05460;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025677.2;locus_tag=LU604_RS05460;partial=true;product=IS91 family transposase;pseudo=true;start_range=.,1044400;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1045456 1046159 . - . ID=gene-LU604_RS05465;Name=LU604_RS05465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05465;old_locus_tag=LU604_05465;pseudo=true NZ_CP089942.1 Protein Homology CDS 1045456 1046159 . - 0 ID=cds-LU604_RS05465;Parent=gene-LU604_RS05465;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU604_RS05465;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1046856 1049000 . + . ID=gene-LU604_RS05470;Name=LU604_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05470;old_locus_tag=LU604_05470 NZ_CP089942.1 Protein Homology CDS 1046856 1049000 . + 0 ID=cds-WP_233480106.1;Parent=gene-LU604_RS05470;Dbxref=Genbank:WP_233480106.1;Name=WP_233480106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155423.1;locus_tag=LU604_RS05470;product=ornithine decarboxylase;protein_id=WP_233480106.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1049035 1049646 . - . ID=gene-LU604_RS05475;Name=LU604_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05475;old_locus_tag=LU604_05475 NZ_CP089942.1 Protein Homology CDS 1049035 1049646 . - 0 ID=cds-WP_233480750.1;Parent=gene-LU604_RS05475;Dbxref=Genbank:WP_233480750.1;Name=WP_233480750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803476.1;locus_tag=LU604_RS05475;product=TetR/AcrR family transcriptional regulator;protein_id=WP_233480750.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1049932 1051152 . + . ID=gene-LU604_RS05480;Name=LU604_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05480;old_locus_tag=LU604_05480 NZ_CP089942.1 Protein Homology CDS 1049932 1051152 . + 0 ID=cds-WP_233480107.1;Parent=gene-LU604_RS05480;Dbxref=Genbank:WP_233480107.1;Name=WP_233480107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190305.1;locus_tag=LU604_RS05480;product=Tm-1-like ATP-binding domain-containing protein;protein_id=WP_233480107.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1051155 1051982 . + . ID=gene-LU604_RS05485;Name=LU604_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05485;old_locus_tag=LU604_05485 NZ_CP089942.1 Protein Homology CDS 1051155 1051982 . + 0 ID=cds-WP_016190304.1;Parent=gene-LU604_RS05485;Dbxref=Genbank:WP_016190304.1;Name=WP_016190304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203698.1;locus_tag=LU604_RS05485;product=phosphoenolpyruvate hydrolase family protein;protein_id=WP_016190304.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1052050 1053129 . - . ID=gene-LU604_RS05490;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=LU604_RS05490;old_locus_tag=LU604_05490 NZ_CP089942.1 Protein Homology CDS 1052050 1053129 . - 0 ID=cds-WP_233480108.1;Parent=gene-LU604_RS05490;Dbxref=Genbank:WP_233480108.1;Name=WP_233480108.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120870.1;locus_tag=LU604_RS05490;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_233480108.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1053181 1053453 . - . ID=gene-LU604_RS05495;Name=LU604_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05495;old_locus_tag=LU604_05495 NZ_CP089942.1 Protein Homology CDS 1053181 1053453 . - 0 ID=cds-WP_016190302.1;Parent=gene-LU604_RS05495;Dbxref=Genbank:WP_016190302.1;Name=WP_016190302.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442550.1;locus_tag=LU604_RS05495;product=oxidative damage protection protein;protein_id=WP_016190302.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1053416 1054567 . - . ID=gene-LU604_RS05500;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=LU604_RS05500;old_locus_tag=LU604_05500 NZ_CP089942.1 Protein Homology CDS 1053416 1054567 . - 0 ID=cds-WP_233480109.1;Parent=gene-LU604_RS05500;Dbxref=Genbank:WP_233480109.1;Name=WP_233480109.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190301.1;locus_tag=LU604_RS05500;product=A/G-specific adenine glycosylase;protein_id=WP_233480109.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1054719 1055438 . + . ID=gene-LU604_RS05505;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=LU604_RS05505;old_locus_tag=LU604_05505 NZ_CP089942.1 Protein Homology CDS 1054719 1055438 . + 0 ID=cds-WP_233480110.1;Parent=gene-LU604_RS05505;Dbxref=Genbank:WP_233480110.1;Name=WP_233480110.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=LU604_RS05505;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_233480110.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1055438 1055764 . + . ID=gene-LU604_RS05510;Name=LU604_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05510;old_locus_tag=LU604_05510 NZ_CP089942.1 Protein Homology CDS 1055438 1055764 . + 0 ID=cds-WP_016190299.1;Parent=gene-LU604_RS05510;Dbxref=Genbank:WP_016190299.1;Name=WP_016190299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417434.4;locus_tag=LU604_RS05510;product=YggL family protein;protein_id=WP_016190299.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1055830 1056549 . + . ID=gene-LU604_RS05515;Name=LU604_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05515;old_locus_tag=LU604_05515 NZ_CP089942.1 Protein Homology CDS 1055830 1056549 . + 0 ID=cds-WP_233480111.1;Parent=gene-LU604_RS05515;Dbxref=Genbank:WP_233480111.1;Name=WP_233480111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190298.1;locus_tag=LU604_RS05515;product=DUF2884 domain-containing protein;protein_id=WP_233480111.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1056610 1057651 . - . ID=gene-LU604_RS05520;Name=LU604_RS05520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05520;old_locus_tag=LU604_05520;pseudo=true NZ_CP089942.1 Protein Homology CDS 1056610 1057651 . - 0 ID=cds-LU604_RS05520;Parent=gene-LU604_RS05520;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS05520;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1057798 1058958 . - . ID=gene-LU604_RS05525;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=LU604_RS05525;old_locus_tag=LU604_05525 NZ_CP089942.1 Protein Homology CDS 1057798 1058958 . - 0 ID=cds-WP_233480112.1;Parent=gene-LU604_RS05525;Dbxref=Genbank:WP_233480112.1;Name=WP_233480112.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190295.1;locus_tag=LU604_RS05525;product=radical SAM family heme chaperone HemW;protein_id=WP_233480112.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1058951 1059547 . - . ID=gene-LU604_RS05530;Name=LU604_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05530;old_locus_tag=LU604_05530 NZ_CP089942.1 Protein Homology CDS 1058951 1059547 . - 0 ID=cds-WP_016190294.1;Parent=gene-LU604_RS05530;Dbxref=Genbank:WP_016190294.1;Name=WP_016190294.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120856.1;locus_tag=LU604_RS05530;product=XTP/dITP diphosphatase;protein_id=WP_016190294.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1059578 1060129 . - . ID=gene-LU604_RS05535;Name=LU604_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05535;old_locus_tag=LU604_05535 NZ_CP089942.1 Protein Homology CDS 1059578 1060129 . - 0 ID=cds-WP_016190293.1;Parent=gene-LU604_RS05535;Dbxref=Genbank:WP_016190293.1;Name=WP_016190293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007729627.1;locus_tag=LU604_RS05535;product=YggT family protein;protein_id=WP_016190293.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1060138 1060845 . - . ID=gene-LU604_RS05540;Name=LU604_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05540;old_locus_tag=LU604_05540 NZ_CP089942.1 Protein Homology CDS 1060138 1060845 . - 0 ID=cds-WP_233480113.1;Parent=gene-LU604_RS05540;Dbxref=Genbank:WP_233480113.1;Name=WP_233480113.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190292.1;locus_tag=LU604_RS05540;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_233480113.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1060860 1061855 . + . ID=gene-LU604_RS05545;Name=LU604_RS05545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05545;old_locus_tag=LU604_05545;pseudo=true NZ_CP089942.1 Protein Homology CDS 1060860 1061855 . + 0 ID=cds-LU604_RS05545;Parent=gene-LU604_RS05545;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358977.1;locus_tag=LU604_RS05545;product=type IV pilus twitching motility protein PilT;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1061867 1062289 . - . ID=gene-LU604_RS05550;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=LU604_RS05550;old_locus_tag=LU604_05550 NZ_CP089942.1 Protein Homology CDS 1061867 1062289 . - 0 ID=cds-WP_016190290.1;Parent=gene-LU604_RS05550;Dbxref=Genbank:WP_016190290.1;Name=WP_016190290.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669219.1;locus_tag=LU604_RS05550;product=Holliday junction resolvase RuvX;protein_id=WP_016190290.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1062289 1062852 . - . ID=gene-LU604_RS05555;Name=LU604_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05555;old_locus_tag=LU604_05555 NZ_CP089942.1 Protein Homology CDS 1062289 1062852 . - 0 ID=cds-WP_016190289.1;Parent=gene-LU604_RS05555;Dbxref=Genbank:WP_016190289.1;Name=WP_016190289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442535.1;locus_tag=LU604_RS05555;product=YqgE/AlgH family protein;protein_id=WP_016190289.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1062946 1063890 . - . ID=gene-LU604_RS05560;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=LU604_RS05560;old_locus_tag=LU604_05560 NZ_CP089942.1 Protein Homology CDS 1062946 1063890 . - 0 ID=cds-WP_233480114.1;Parent=gene-LU604_RS05560;Dbxref=Genbank:WP_233480114.1;Name=WP_233480114.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803492.1;locus_tag=LU604_RS05560;product=glutathione synthase;protein_id=WP_233480114.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1063974 1064705 . - . ID=gene-LU604_RS05565;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=LU604_RS05565;old_locus_tag=LU604_05565 NZ_CP089942.1 Protein Homology CDS 1063974 1064705 . - 0 ID=cds-WP_233480115.1;Parent=gene-LU604_RS05565;Dbxref=Genbank:WP_233480115.1;Name=WP_233480115.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=LU604_RS05565;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_233480115.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1064780 1065493 . - . ID=gene-LU604_RS05570;Name=endA;gbkey=Gene;gene=endA;gene_biotype=pseudogene;locus_tag=LU604_RS05570;old_locus_tag=LU604_05570;pseudo=true NZ_CP089942.1 Protein Homology CDS 1064780 1065493 . - 0 ID=cds-LU604_RS05570;Parent=gene-LU604_RS05570;Note=internal stop;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539432.1;locus_tag=LU604_RS05570;product=deoxyribonuclease I;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1065599 1066123 . - . ID=gene-LU604_RS05575;Name=LU604_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05575;old_locus_tag=LU604_05575 NZ_CP089942.1 Protein Homology CDS 1065599 1066123 . - 0 ID=cds-WP_233480116.1;Parent=gene-LU604_RS05575;Dbxref=Genbank:WP_233480116.1;Name=WP_233480116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178441.1;locus_tag=LU604_RS05575;product=SprT family zinc-dependent metalloprotease;protein_id=WP_233480116.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1066193 1067548 . - . ID=gene-LU604_RS05580;Name=LU604_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05580;old_locus_tag=LU604_05580 NZ_CP089942.1 Protein Homology CDS 1066193 1067548 . - 0 ID=cds-WP_233480751.1;Parent=gene-LU604_RS05580;Dbxref=Genbank:WP_233480751.1;Name=WP_233480751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171999.1;locus_tag=LU604_RS05580;product=sugar porter family MFS transporter;protein_id=WP_233480751.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1068006 1069157 . - . ID=gene-LU604_RS05585;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=LU604_RS05585;old_locus_tag=LU604_05585 NZ_CP089942.1 Protein Homology CDS 1068006 1069157 . - 0 ID=cds-WP_233480117.1;Parent=gene-LU604_RS05585;Dbxref=Genbank:WP_233480117.1;Name=WP_233480117.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007370216.1;locus_tag=LU604_RS05585;product=methionine adenosyltransferase;protein_id=WP_233480117.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1069868 1071844 . + . ID=gene-LU604_RS05590;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=LU604_RS05590;old_locus_tag=LU604_05590 NZ_CP089942.1 Protein Homology CDS 1069868 1071844 . + 0 ID=cds-WP_016190282.1;Parent=gene-LU604_RS05590;Dbxref=Genbank:WP_016190282.1;Name=WP_016190282.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007752219.1;locus_tag=LU604_RS05590;product=biosynthetic arginine decarboxylase;protein_id=WP_016190282.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1072011 1072946 . + . ID=gene-LU604_RS05595;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=LU604_RS05595;old_locus_tag=LU604_05595 NZ_CP089942.1 Protein Homology CDS 1072011 1072946 . + 0 ID=cds-WP_016190281.1;Parent=gene-LU604_RS05595;Dbxref=Genbank:WP_016190281.1;Name=WP_016190281.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374497.1;locus_tag=LU604_RS05595;product=agmatinase;protein_id=WP_016190281.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1074046 1076037 . + . ID=gene-LU604_RS05600;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=LU604_RS05600;old_locus_tag=LU604_05600 NZ_CP089942.1 Protein Homology CDS 1074046 1076037 . + 0 ID=cds-WP_233480118.1;Parent=gene-LU604_RS05600;Dbxref=Genbank:WP_233480118.1;Name=WP_233480118.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026188.1;locus_tag=LU604_RS05600;product=transketolase;protein_id=WP_233480118.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1076557 1077099 . - . ID=gene-LU604_RS05605;Name=LU604_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05605;old_locus_tag=LU604_05605 NZ_CP089942.1 Protein Homology CDS 1076557 1077099 . - 0 ID=cds-WP_157275217.1;Parent=gene-LU604_RS05605;Dbxref=Genbank:WP_157275217.1;Name=WP_157275217.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016408.2;locus_tag=LU604_RS05605;product=polymer-forming cytoskeletal protein;protein_id=WP_157275217.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1077092 1077265 . - . ID=gene-LU604_RS05610;Name=LU604_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05610;old_locus_tag=LU604_05610 NZ_CP089942.1 GeneMarkS-2+ CDS 1077092 1077265 . - 0 ID=cds-WP_157275216.1;Parent=gene-LU604_RS05610;Dbxref=Genbank:WP_157275216.1;Name=WP_157275216.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05610;product=hypothetical protein;protein_id=WP_157275216.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1077726 1078772 . + . ID=gene-LU604_RS05615;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=LU604_RS05615;old_locus_tag=LU604_05615 NZ_CP089942.1 Protein Homology CDS 1077726 1078772 . + 0 ID=cds-WP_016190277.1;Parent=gene-LU604_RS05615;Dbxref=Genbank:WP_016190277.1;Name=WP_016190277.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155511.1;locus_tag=LU604_RS05615;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_016190277.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1078795 1079955 . + . ID=gene-LU604_RS05620;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=LU604_RS05620;old_locus_tag=LU604_05620 NZ_CP089942.1 Protein Homology CDS 1078795 1079955 . + 0 ID=cds-WP_016190276.1;Parent=gene-LU604_RS05620;Dbxref=Genbank:WP_016190276.1;Name=WP_016190276.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461985.1;locus_tag=LU604_RS05620;product=phosphoglycerate kinase;protein_id=WP_016190276.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1080043 1081122 . + . ID=gene-LU604_RS05625;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=LU604_RS05625;old_locus_tag=LU604_05625 NZ_CP089942.1 Protein Homology CDS 1080043 1081122 . + 0 ID=cds-WP_016190275.1;Parent=gene-LU604_RS05625;Dbxref=Genbank:WP_016190275.1;Name=WP_016190275.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228720.1;locus_tag=LU604_RS05625;product=class II fructose-bisphosphate aldolase;protein_id=WP_016190275.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1081431 1082315 . + . ID=gene-LU604_RS05630;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=LU604_RS05630;old_locus_tag=LU604_05630 NZ_CP089942.1 Protein Homology CDS 1081431 1082315 . + 0 ID=cds-WP_016190274.1;Parent=gene-LU604_RS05630;Dbxref=Genbank:WP_016190274.1;Name=WP_016190274.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594505.1;locus_tag=LU604_RS05630;product=small-conductance mechanosensitive channel MscS;protein_id=WP_016190274.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1082487 1082917 . + . ID=gene-LU604_RS05635;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS05635;old_locus_tag=LU604_05635;pseudo=true NZ_CP089942.1 Protein Homology CDS 1082487 1082917 . + 0 ID=cds-LU604_RS05635;Parent=gene-LU604_RS05635;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU604_RS05635;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1083109 1083720 . + . ID=gene-LU604_RS05640;Name=LU604_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05640;old_locus_tag=LU604_05640 NZ_CP089942.1 Protein Homology CDS 1083109 1083720 . + 0 ID=cds-WP_233480119.1;Parent=gene-LU604_RS05640;Dbxref=Genbank:WP_233480119.1;Name=WP_233480119.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190272.1;locus_tag=LU604_RS05640;product=LysE family transporter;protein_id=WP_233480119.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1083746 1084060 . + . ID=gene-LU604_RS05645;Name=LU604_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05645;old_locus_tag=LU604_05645 NZ_CP089942.1 GeneMarkS-2+ CDS 1083746 1084060 . + 0 ID=cds-WP_233480120.1;Parent=gene-LU604_RS05645;Dbxref=Genbank:WP_233480120.1;Name=WP_233480120.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05645;product=hypothetical protein;protein_id=WP_233480120.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1084138 1084734 . - . ID=gene-LU604_RS05650;Name=LU604_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05650;old_locus_tag=LU604_05650 NZ_CP089942.1 Protein Homology CDS 1084138 1084734 . - 0 ID=cds-WP_233479042.1;Parent=gene-LU604_RS05650;Dbxref=Genbank:WP_233479042.1;Name=WP_233479042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191786.1;locus_tag=LU604_RS05650;product=tail fiber assembly protein;protein_id=WP_233479042.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1084734 1085420 . - . ID=gene-LU604_RS05655;Name=LU604_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05655;old_locus_tag=LU604_05655 NZ_CP089942.1 Protein Homology CDS 1084734 1085420 . - 0 ID=cds-WP_233479043.1;Parent=gene-LU604_RS05655;Dbxref=Genbank:WP_233479043.1;Name=WP_233479043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246703.1;locus_tag=LU604_RS05655;product=phage tail protein;protein_id=WP_233479043.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1085423 1086007 . - . ID=gene-LU604_RS05660;Name=LU604_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05660;old_locus_tag=LU604_05660 NZ_CP089942.1 Protein Homology CDS 1085423 1086007 . - 0 ID=cds-WP_016191784.1;Parent=gene-LU604_RS05660;Dbxref=Genbank:WP_016191784.1;Name=WP_016191784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012989058.1;locus_tag=LU604_RS05660;product=DUF2313 domain-containing protein;protein_id=WP_016191784.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1086077 1087078 . - . ID=gene-LU604_RS05665;Name=LU604_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05665;old_locus_tag=LU604_05665 NZ_CP089942.1 Protein Homology CDS 1086077 1087078 . - 0 ID=cds-WP_233479044.1;Parent=gene-LU604_RS05665;Dbxref=Genbank:WP_233479044.1;Name=WP_233479044.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016736.2;locus_tag=LU604_RS05665;product=baseplate J/gp47 family protein;protein_id=WP_233479044.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1087079 1087519 . - . ID=gene-LU604_RS05670;Name=LU604_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05670;old_locus_tag=LU604_05670 NZ_CP089942.1 Protein Homology CDS 1087079 1087519 . - 0 ID=cds-WP_016191782.1;Parent=gene-LU604_RS05670;Dbxref=Genbank:WP_016191782.1;Name=WP_016191782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185022.1;locus_tag=LU604_RS05670;product=phage GP46 family protein;protein_id=WP_016191782.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1087516 1088064 . - . ID=gene-LU604_RS05675;Name=LU604_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05675;old_locus_tag=LU604_05675 NZ_CP089942.1 Protein Homology CDS 1087516 1088064 . - 0 ID=cds-WP_016191781.1;Parent=gene-LU604_RS05675;Dbxref=Genbank:WP_016191781.1;Name=WP_016191781.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185021.1;locus_tag=LU604_RS05675;product=phage baseplate assembly protein V;protein_id=WP_016191781.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1088061 1089158 . - . ID=gene-LU604_RS05680;Name=LU604_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05680;old_locus_tag=LU604_05680 NZ_CP089942.1 Protein Homology CDS 1088061 1089158 . - 0 ID=cds-WP_233479045.1;Parent=gene-LU604_RS05680;Dbxref=Genbank:WP_233479045.1;Name=WP_233479045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191780.1;locus_tag=LU604_RS05680;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_233479045.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1089142 1090458 . - . ID=gene-LU604_RS05685;Name=LU604_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05685;old_locus_tag=LU604_05685 NZ_CP089942.1 Protein Homology CDS 1089142 1090458 . - 0 ID=cds-WP_233479046.1;Parent=gene-LU604_RS05685;Dbxref=Genbank:WP_233479046.1;Name=WP_233479046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847257.1;locus_tag=LU604_RS05685;product=DNA circularization N-terminal domain-containing protein;protein_id=WP_233479046.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1090458 1092266 . - . ID=gene-LU604_RS05690;Name=LU604_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05690;old_locus_tag=LU604_05690 NZ_CP089942.1 GeneMarkS-2+ CDS 1090458 1092266 . - 0 ID=cds-WP_233481374.1;Parent=gene-LU604_RS05690;Dbxref=Genbank:WP_233481374.1;Name=WP_233481374.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05690;product=hypothetical protein;protein_id=WP_233481374.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1092267 1092398 . - . ID=gene-LU604_RS26915;Name=LU604_RS26915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26915 NZ_CP089942.1 GeneMarkS-2+ CDS 1092267 1092398 . - 0 ID=cds-WP_016191777.1;Parent=gene-LU604_RS26915;Dbxref=Genbank:WP_016191777.1;Name=WP_016191777.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26915;product=hypothetical protein;protein_id=WP_016191777.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1092400 1092753 . - . ID=gene-LU604_RS05695;Name=LU604_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05695;old_locus_tag=LU604_05695 NZ_CP089942.1 Protein Homology CDS 1092400 1092753 . - 0 ID=cds-WP_016191776.1;Parent=gene-LU604_RS05695;Dbxref=Genbank:WP_016191776.1;Name=WP_016191776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185017.1;locus_tag=LU604_RS05695;product=phage tail assembly protein;protein_id=WP_016191776.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1092757 1093116 . - . ID=gene-LU604_RS05700;Name=LU604_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05700;old_locus_tag=LU604_05700 NZ_CP089942.1 Protein Homology CDS 1092757 1093116 . - 0 ID=cds-WP_016191775.1;Parent=gene-LU604_RS05700;Dbxref=Genbank:WP_016191775.1;Name=WP_016191775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185016.1;locus_tag=LU604_RS05700;product=phage tail tube protein;protein_id=WP_016191775.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1093126 1094592 . - . ID=gene-LU604_RS05705;Name=LU604_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05705;old_locus_tag=LU604_05705 NZ_CP089942.1 Protein Homology CDS 1093126 1094592 . - 0 ID=cds-WP_016191774.1;Parent=gene-LU604_RS05705;Dbxref=Genbank:WP_016191774.1;Name=WP_016191774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185015.1;locus_tag=LU604_RS05705;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_016191774.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1094592 1094771 . - . ID=gene-LU604_RS05710;Name=LU604_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05710;old_locus_tag=LU604_05710 NZ_CP089942.1 Protein Homology CDS 1094592 1094771 . - 0 ID=cds-WP_016191773.1;Parent=gene-LU604_RS05710;Dbxref=Genbank:WP_016191773.1;Name=WP_016191773.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022401.2;locus_tag=LU604_RS05710;product=DUF2635 domain-containing protein;protein_id=WP_016191773.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1094764 1095330 . - . ID=gene-LU604_RS05715;Name=LU604_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05715;old_locus_tag=LU604_05715 NZ_CP089942.1 Protein Homology CDS 1094764 1095330 . - 0 ID=cds-WP_016191772.1;Parent=gene-LU604_RS05715;Dbxref=Genbank:WP_016191772.1;Name=WP_016191772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185013.1;locus_tag=LU604_RS05715;product=DUF1834 family protein;protein_id=WP_016191772.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1095332 1095784 . - . ID=gene-LU604_RS05720;Name=LU604_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05720;old_locus_tag=LU604_05720 NZ_CP089942.1 Protein Homology CDS 1095332 1095784 . - 0 ID=cds-WP_233479047.1;Parent=gene-LU604_RS05720;Dbxref=Genbank:WP_233479047.1;Name=WP_233479047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191771.1;locus_tag=LU604_RS05720;product=DUF1320 family protein;protein_id=WP_233479047.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1095781 1096248 . - . ID=gene-LU604_RS05725;Name=LU604_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05725;old_locus_tag=LU604_05725 NZ_CP089942.1 Protein Homology CDS 1095781 1096248 . - 0 ID=cds-WP_233479048.1;Parent=gene-LU604_RS05725;Dbxref=Genbank:WP_233479048.1;Name=WP_233479048.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036841.2;locus_tag=LU604_RS05725;product=HI1506-related protein;protein_id=WP_233479048.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1096326 1097249 . - . ID=gene-LU604_RS05730;Name=LU604_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05730;old_locus_tag=LU604_05730 NZ_CP089942.1 Protein Homology CDS 1096326 1097249 . - 0 ID=cds-WP_233479049.1;Parent=gene-LU604_RS05730;Dbxref=Genbank:WP_233479049.1;Name=WP_233479049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185010.1;locus_tag=LU604_RS05730;product=Mu-like prophage major head subunit gpT family protein;protein_id=WP_233479049.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1097249 1098445 . - . ID=gene-LU604_RS05735;Name=LU604_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05735;old_locus_tag=LU604_05735 NZ_CP089942.1 Protein Homology CDS 1097249 1098445 . - 0 ID=cds-WP_233479050.1;Parent=gene-LU604_RS05735;Dbxref=Genbank:WP_233479050.1;Name=WP_233479050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191767.1;locus_tag=LU604_RS05735;product=phage protease;protein_id=WP_233479050.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1098603 1099070 . - . ID=gene-LU604_RS05740;Name=LU604_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05740;old_locus_tag=LU604_05740 NZ_CP089942.1 Protein Homology CDS 1098603 1099070 . - 0 ID=cds-WP_016191766.1;Parent=gene-LU604_RS05740;Dbxref=Genbank:WP_016191766.1;Name=WP_016191766.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185008.1;locus_tag=LU604_RS05740;product=phage virion morphogenesis protein;protein_id=WP_016191766.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1099071 1100393 . - . ID=gene-LU604_RS05745;Name=LU604_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05745;old_locus_tag=LU604_05745 NZ_CP089942.1 Protein Homology CDS 1099071 1100393 . - 0 ID=cds-WP_233479051.1;Parent=gene-LU604_RS05745;Dbxref=Genbank:WP_233479051.1;Name=WP_233479051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536785.1;locus_tag=LU604_RS05745;product=phage minor head protein;protein_id=WP_233479051.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1100377 1101960 . - . ID=gene-LU604_RS05750;Name=LU604_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05750;old_locus_tag=LU604_05750 NZ_CP089942.1 Protein Homology CDS 1100377 1101960 . - 0 ID=cds-WP_233479052.1;Parent=gene-LU604_RS05750;Dbxref=Genbank:WP_233479052.1;Name=WP_233479052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191763.1;locus_tag=LU604_RS05750;product=DUF935 domain-containing protein;protein_id=WP_233479052.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1101951 1103513 . - . ID=gene-LU604_RS05755;Name=LU604_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05755;old_locus_tag=LU604_05755 NZ_CP089942.1 Protein Homology CDS 1101951 1103513 . - 0 ID=cds-WP_233479053.1;Parent=gene-LU604_RS05755;Dbxref=Genbank:WP_233479053.1;Name=WP_233479053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191762.1;locus_tag=LU604_RS05755;product=hypothetical protein;protein_id=WP_233479053.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1103513 1104085 . - . ID=gene-LU604_RS05760;Name=LU604_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05760;old_locus_tag=LU604_05760 NZ_CP089942.1 Protein Homology CDS 1103513 1104085 . - 0 ID=cds-WP_233479054.1;Parent=gene-LU604_RS05760;Dbxref=Genbank:WP_233479054.1;Name=WP_233479054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191761.1;locus_tag=LU604_RS05760;product=DUF3486 family protein;protein_id=WP_233479054.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1104087 1104374 . - . ID=gene-LU604_RS05765;Name=LU604_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05765;old_locus_tag=LU604_05765 NZ_CP089942.1 Protein Homology CDS 1104087 1104374 . - 0 ID=cds-WP_016191760.1;Parent=gene-LU604_RS05765;Dbxref=Genbank:WP_016191760.1;Name=WP_016191760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442919.1;locus_tag=LU604_RS05765;product=hypothetical protein;protein_id=WP_016191760.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1104377 1104670 . - . ID=gene-LU604_RS05770;Name=LU604_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05770;old_locus_tag=LU604_05770 NZ_CP089942.1 Protein Homology CDS 1104377 1104670 . - 0 ID=cds-WP_016191759.1;Parent=gene-LU604_RS05770;Dbxref=Genbank:WP_016191759.1;Name=WP_016191759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807466.1;locus_tag=LU604_RS05770;product=DUF2730 family protein;protein_id=WP_016191759.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1104663 1104887 . - . ID=gene-LU604_RS05775;Name=LU604_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05775;old_locus_tag=LU604_05775 NZ_CP089942.1 Protein Homology CDS 1104663 1104887 . - 0 ID=cds-WP_016191758.1;Parent=gene-LU604_RS05775;Dbxref=Genbank:WP_016191758.1;Name=WP_016191758.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF013427.2;locus_tag=LU604_RS05775;product=TraR/DksA C4-type zinc finger protein;protein_id=WP_016191758.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1104887 1105489 . - . ID=gene-LU604_RS05780;Name=LU604_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05780;old_locus_tag=LU604_05780 NZ_CP089942.1 GeneMarkS-2+ CDS 1104887 1105489 . - 0 ID=cds-WP_233479055.1;Parent=gene-LU604_RS05780;Dbxref=Genbank:WP_233479055.1;Name=WP_233479055.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05780;product=hypothetical protein;protein_id=WP_233479055.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1105482 1105715 . - . ID=gene-LU604_RS05785;Name=LU604_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05785;old_locus_tag=LU604_05785 NZ_CP089942.1 Protein Homology CDS 1105482 1105715 . - 0 ID=cds-WP_016191756.1;Parent=gene-LU604_RS05785;Dbxref=Genbank:WP_016191756.1;Name=WP_016191756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185000.1;locus_tag=LU604_RS05785;product=hypothetical protein;protein_id=WP_016191756.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1105705 1106004 . - . ID=gene-LU604_RS05790;Name=LU604_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05790;old_locus_tag=LU604_05790 NZ_CP089942.1 Protein Homology CDS 1105705 1106004 . - 0 ID=cds-WP_016191755.1;Parent=gene-LU604_RS05790;Dbxref=Genbank:WP_016191755.1;Name=WP_016191755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184999.1;locus_tag=LU604_RS05790;product=hypothetical protein;protein_id=WP_016191755.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1106004 1106510 . - . ID=gene-LU604_RS05795;Name=LU604_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05795;old_locus_tag=LU604_05795 NZ_CP089942.1 Protein Homology CDS 1106004 1106510 . - 0 ID=cds-WP_233479056.1;Parent=gene-LU604_RS05795;Dbxref=Genbank:WP_233479056.1;Name=WP_233479056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191754.1;locus_tag=LU604_RS05795;product=peptidoglycan-binding protein;protein_id=WP_233479056.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1106632 1107072 . - . ID=gene-LU604_RS05800;Name=LU604_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05800;old_locus_tag=LU604_05800 NZ_CP089942.1 Protein Homology CDS 1106632 1107072 . - 0 ID=cds-WP_016191753.1;Parent=gene-LU604_RS05800;Dbxref=Genbank:WP_016191753.1;Name=WP_016191753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184997.1;locus_tag=LU604_RS05800;product=transcriptional regulator;protein_id=WP_016191753.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1107069 1107578 . - . ID=gene-LU604_RS05805;Name=LU604_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05805;old_locus_tag=LU604_05805 NZ_CP089942.1 Protein Homology CDS 1107069 1107578 . - 0 ID=cds-WP_016191752.1;Parent=gene-LU604_RS05805;Dbxref=Genbank:WP_016191752.1;Name=WP_016191752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184995.1;locus_tag=LU604_RS05805;product=hypothetical protein;protein_id=WP_016191752.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1107575 1108129 . - . ID=gene-LU604_RS05810;Name=LU604_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05810;old_locus_tag=LU604_05810 NZ_CP089942.1 Protein Homology CDS 1107575 1108129 . - 0 ID=cds-WP_016191751.1;Parent=gene-LU604_RS05810;Dbxref=Genbank:WP_016191751.1;Name=WP_016191751.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018011.2;locus_tag=LU604_RS05810;product=regulatory protein GemA;protein_id=WP_016191751.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1108240 1108500 . - . ID=gene-LU604_RS05815;Name=LU604_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05815;old_locus_tag=LU604_05815 NZ_CP089942.1 GeneMarkS-2+ CDS 1108240 1108500 . - 0 ID=cds-WP_016191750.1;Parent=gene-LU604_RS05815;Dbxref=Genbank:WP_016191750.1;Name=WP_016191750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05815;product=hypothetical protein;protein_id=WP_016191750.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1108502 1109116 . - . ID=gene-LU604_RS05820;Name=LU604_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05820;old_locus_tag=LU604_05820 NZ_CP089942.1 Protein Homology CDS 1108502 1109116 . - 0 ID=cds-WP_233479057.1;Parent=gene-LU604_RS05820;Dbxref=Genbank:WP_233479057.1;Name=WP_233479057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807477.1;locus_tag=LU604_RS05820;product=DUF3164 family protein;protein_id=WP_233479057.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1109109 1109351 . - . ID=gene-LU604_RS05825;Name=LU604_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05825;old_locus_tag=LU604_05825 NZ_CP089942.1 GeneMarkS-2+ CDS 1109109 1109351 . - 0 ID=cds-WP_016191748.1;Parent=gene-LU604_RS05825;Dbxref=Genbank:WP_016191748.1;Name=WP_016191748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05825;product=hypothetical protein;protein_id=WP_016191748.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1109348 1109833 . - . ID=gene-LU604_RS05830;Name=LU604_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05830;old_locus_tag=LU604_05830 NZ_CP089942.1 Protein Homology CDS 1109348 1109833 . - 0 ID=cds-WP_233479058.1;Parent=gene-LU604_RS05830;Dbxref=Genbank:WP_233479058.1;Name=WP_233479058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191747.1;locus_tag=LU604_RS05830;product=AAA family ATPase;protein_id=WP_233479058.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1109751 1110299 . - . ID=gene-LU604_RS05835;Name=LU604_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05835;old_locus_tag=LU604_05835 NZ_CP089942.1 GeneMarkS-2+ CDS 1109751 1110299 . - 0 ID=cds-WP_233479059.1;Parent=gene-LU604_RS05835;Dbxref=Genbank:WP_233479059.1;Name=WP_233479059.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05835;product=hypothetical protein;protein_id=WP_233479059.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1110302 1112284 . - . ID=gene-LU604_RS05840;Name=LU604_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05840;old_locus_tag=LU604_05840 NZ_CP089942.1 Protein Homology CDS 1110302 1112284 . - 0 ID=cds-WP_233480146.1;Parent=gene-LU604_RS05840;Dbxref=Genbank:WP_233480146.1;Name=WP_233480146.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF014911.2;locus_tag=LU604_RS05840;product=DNA-binding protein;protein_id=WP_233480146.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1112576 1113397 . + . ID=gene-LU604_RS05845;Name=LU604_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05845;old_locus_tag=LU604_05845 NZ_CP089942.1 Protein Homology CDS 1112576 1113397 . + 0 ID=cds-WP_233479062.1;Parent=gene-LU604_RS05845;Dbxref=Genbank:WP_233479062.1;Name=WP_233479062.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.2;locus_tag=LU604_RS05845;product=helix-turn-helix transcriptional regulator;protein_id=WP_233479062.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1113809 1114192 . + . ID=gene-LU604_RS05850;Name=LU604_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05850;old_locus_tag=LU604_05850 NZ_CP089942.1 GeneMarkS-2+ CDS 1113809 1114192 . + 0 ID=cds-WP_233480147.1;Parent=gene-LU604_RS05850;Dbxref=Genbank:WP_233480147.1;Name=WP_233480147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05850;product=hypothetical protein;protein_id=WP_233480147.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1114507 1115232 . + . ID=gene-LU604_RS05855;Name=LU604_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05855;old_locus_tag=LU604_05855 NZ_CP089942.1 Protein Homology CDS 1114507 1115232 . + 0 ID=cds-WP_233480148.1;Parent=gene-LU604_RS05855;Dbxref=Genbank:WP_233480148.1;Name=WP_233480148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190270.1;locus_tag=LU604_RS05855;product=oxidative stress defense protein;protein_id=WP_233480148.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1115239 1116135 . - . ID=gene-LU604_RS05860;Name=LU604_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05860;old_locus_tag=LU604_05860 NZ_CP089942.1 Protein Homology CDS 1115239 1116135 . - 0 ID=cds-WP_016190269.1;Parent=gene-LU604_RS05860;Dbxref=Genbank:WP_016190269.1;Name=WP_016190269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828351.1;locus_tag=LU604_RS05860;product=LysR family transcriptional regulator ArgP;protein_id=WP_016190269.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1116331 1116990 . + . ID=gene-LU604_RS05865;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=LU604_RS05865;old_locus_tag=LU604_05865 NZ_CP089942.1 Protein Homology CDS 1116331 1116990 . + 0 ID=cds-WP_016190268.1;Parent=gene-LU604_RS05865;Dbxref=Genbank:WP_016190268.1;Name=WP_016190268.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004876719.1;locus_tag=LU604_RS05865;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_016190268.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1117270 1118505 . + . ID=gene-LU604_RS05870;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=LU604_RS05870;old_locus_tag=LU604_05870 NZ_CP089942.1 Protein Homology CDS 1117270 1118505 . + 0 ID=cds-WP_016190267.1;Parent=gene-LU604_RS05870;Dbxref=Genbank:WP_016190267.1;Name=WP_016190267.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228712.1;locus_tag=LU604_RS05870;product=phosphoglycerate dehydrogenase;protein_id=WP_016190267.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1118715 1119302 . - . ID=gene-LU604_RS05875;Name=LU604_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05875;old_locus_tag=LU604_05875 NZ_CP089942.1 Protein Homology CDS 1118715 1119302 . - 0 ID=cds-WP_016190266.1;Parent=gene-LU604_RS05875;Dbxref=Genbank:WP_016190266.1;Name=WP_016190266.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543338.1;locus_tag=LU604_RS05875;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_016190266.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1119374 1119557 . - . ID=gene-LU604_RS05880;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=LU604_RS05880;old_locus_tag=LU604_05880 NZ_CP089942.1 cmsearch ncRNA 1119374 1119557 . - . ID=rna-LU604_RS05880;Parent=gene-LU604_RS05880;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS05880;product=6S RNA NZ_CP089942.1 cmsearch exon 1119374 1119557 . - . ID=exon-LU604_RS05880-1;Parent=rna-LU604_RS05880;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS05880;product=6S RNA NZ_CP089942.1 RefSeq gene 1119598 1119927 . - . ID=gene-LU604_RS05885;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=LU604_RS05885;old_locus_tag=LU604_05885 NZ_CP089942.1 Protein Homology CDS 1119598 1119927 . - 0 ID=cds-WP_016190264.1;Parent=gene-LU604_RS05885;Dbxref=Genbank:WP_016190264.1;Name=WP_016190264.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005971092.1;locus_tag=LU604_RS05885;product=cell division protein ZapA;protein_id=WP_016190264.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1120097 1120675 . + . ID=gene-LU604_RS05890;Name=LU604_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05890;old_locus_tag=LU604_05890 NZ_CP089942.1 Protein Homology CDS 1120097 1120675 . + 0 ID=cds-WP_016190263.1;Parent=gene-LU604_RS05890;Dbxref=Genbank:WP_016190263.1;Name=WP_016190263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860099.1;locus_tag=LU604_RS05890;product=YecA family protein;protein_id=WP_016190263.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1120706 1122022 . + . ID=gene-LU604_RS05895;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=LU604_RS05895;old_locus_tag=LU604_05895 NZ_CP089942.1 Protein Homology CDS 1120706 1122022 . + 0 ID=cds-WP_016190262.1;Parent=gene-LU604_RS05895;Dbxref=Genbank:WP_016190262.1;Name=WP_016190262.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543341.1;locus_tag=LU604_RS05895;product=Xaa-Pro aminopeptidase;protein_id=WP_016190262.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1122019 1123197 . + . ID=gene-LU604_RS05900;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=LU604_RS05900;old_locus_tag=LU604_05900 NZ_CP089942.1 Protein Homology CDS 1122019 1123197 . + 0 ID=cds-WP_233481530.1;Parent=gene-LU604_RS05900;Dbxref=Genbank:WP_233481530.1;Name=WP_233481530.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543342.1;locus_tag=LU604_RS05900;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_233481530.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1123211 1124413 . + . ID=gene-LU604_RS05905;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=LU604_RS05905;old_locus_tag=LU604_05905 NZ_CP089942.1 Protein Homology CDS 1123211 1124413 . + 0 ID=cds-WP_233480150.1;Parent=gene-LU604_RS05905;Dbxref=Genbank:WP_233480150.1;Name=WP_233480150.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852862.1;locus_tag=LU604_RS05905;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_233480150.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1124428 1124655 . - . ID=gene-LU604_RS05910;Name=LU604_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05910;old_locus_tag=LU604_05910 NZ_CP089942.1 GeneMarkS-2+ CDS 1124428 1124655 . - 0 ID=cds-WP_016190259.1;Parent=gene-LU604_RS05910;Dbxref=Genbank:WP_016190259.1;Name=WP_016190259.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05910;product=hypothetical protein;protein_id=WP_016190259.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1124722 1124961 . - . ID=gene-LU604_RS05915;Name=LU604_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05915;old_locus_tag=LU604_05915 NZ_CP089942.1 GeneMarkS-2+ CDS 1124722 1124961 . - 0 ID=cds-WP_016190258.1;Parent=gene-LU604_RS05915;Dbxref=Genbank:WP_016190258.1;Name=WP_016190258.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05915;product=hypothetical protein;protein_id=WP_016190258.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1126076 1127170 . + . ID=gene-LU604_RS05920;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=LU604_RS05920;old_locus_tag=LU604_05920 NZ_CP089942.1 Protein Homology CDS 1126076 1127170 . + 0 ID=cds-WP_233480151.1;Parent=gene-LU604_RS05920;Dbxref=Genbank:WP_233480151.1;Name=WP_233480151.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190256.1;locus_tag=LU604_RS05920;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_233480151.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1127246 1127632 . + . ID=gene-LU604_RS05925;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=LU604_RS05925;old_locus_tag=LU604_05925 NZ_CP089942.1 Protein Homology CDS 1127246 1127632 . + 0 ID=cds-WP_016190255.1;Parent=gene-LU604_RS05925;Dbxref=Genbank:WP_016190255.1;Name=WP_016190255.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852867.1;locus_tag=LU604_RS05925;product=glycine cleavage system protein GcvH;protein_id=WP_016190255.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1127656 1130538 . + . ID=gene-LU604_RS05930;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=LU604_RS05930;old_locus_tag=LU604_05930 NZ_CP089942.1 Protein Homology CDS 1127656 1130538 . + 0 ID=cds-WP_233480152.1;Parent=gene-LU604_RS05930;Dbxref=Genbank:WP_233480152.1;Name=WP_233480152.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190254.1;locus_tag=LU604_RS05930;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_233480152.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1130802 1131092 . + . ID=gene-LU604_RS05935;Name=LU604_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05935;old_locus_tag=LU604_05935 NZ_CP089942.1 GeneMarkS-2+ CDS 1130802 1131092 . + 0 ID=cds-WP_233480153.1;Parent=gene-LU604_RS05935;Dbxref=Genbank:WP_233480153.1;Name=WP_233480153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS05935;product=hypothetical protein;protein_id=WP_233480153.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1131226 1131336 . - . ID=gene-LU604_RS05940;Name=LU604_RS05940;end_range=1131336,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05940;old_locus_tag=LU604_05940;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1131226 1131336 . - 0 ID=cds-LU604_RS05940;Parent=gene-LU604_RS05940;Note=in E. coli K-12 this is in prophage P2 remnant%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1131336,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000468310.1;locus_tag=LU604_RS05940;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1131610 1133049 . - . ID=gene-LU604_RS05945;Name=LU604_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05945;old_locus_tag=LU604_05945 NZ_CP089942.1 Protein Homology CDS 1131610 1133049 . - 0 ID=cds-WP_233480154.1;Parent=gene-LU604_RS05945;Dbxref=Genbank:WP_233480154.1;Name=WP_233480154.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190252.1;locus_tag=LU604_RS05945;product=6-phospho-beta-glucosidase;protein_id=WP_233480154.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1133243 1133713 . - . ID=gene-LU604_RS05950;Name=LU604_RS05950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05950;old_locus_tag=LU604_05950;partial=true;pseudo=true;start_range=.,1133243 NZ_CP089942.1 Protein Homology CDS 1133243 1133713 . - 0 ID=cds-LU604_RS05950;Parent=gene-LU604_RS05950;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005159369.1;locus_tag=LU604_RS05950;partial=true;product=PTS transporter subunit EIIB;pseudo=true;start_range=.,1133243;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1133728 1134118 . + . ID=gene-LU604_RS05955;Name=LU604_RS05955;end_range=1134118,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05955;old_locus_tag=LU604_05955;partial=true;pseudo=true;start_range=.,1133728 NZ_CP089942.1 Protein Homology CDS 1133728 1134118 . + 0 ID=cds-LU604_RS05955;Parent=gene-LU604_RS05955;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016020;end_range=1134118,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003838267.1;locus_tag=LU604_RS05955;partial=true;product=hemolysin III family protein;pseudo=true;start_range=.,1133728;transl_table=11 NZ_CP089942.1 RefSeq gene 1134168 1134865 . + . ID=gene-LU604_RS05960;Name=LU604_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05960;old_locus_tag=LU604_05960 NZ_CP089942.1 Protein Homology CDS 1134168 1134429 . + 0 ID=cds-WP_233480155.1;Parent=gene-LU604_RS05960;Dbxref=Genbank:WP_233480155.1;Name=WP_233480155.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU604_RS05960;product=IS1 family transposase;protein_id=WP_233480155.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 1134429 1134865 . + 2 ID=cds-WP_233480155.1;Parent=gene-LU604_RS05960;Dbxref=Genbank:WP_233480155.1;Name=WP_233480155.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU604_RS05960;product=IS1 family transposase;protein_id=WP_233480155.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1134887 1134997 . + . ID=gene-LU604_RS05965;Name=LU604_RS05965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS05965;old_locus_tag=LU604_05965;partial=true;pseudo=true;start_range=.,1134887 NZ_CP089942.1 Protein Homology CDS 1134887 1134997 . + 0 ID=cds-LU604_RS05965;Parent=gene-LU604_RS05965;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442496.1;locus_tag=LU604_RS05965;partial=true;product=hemolysin III family protein;pseudo=true;start_range=.,1134887;transl_table=11 NZ_CP089942.1 RefSeq gene 1135039 1136019 . - . ID=gene-LU604_RS05970;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=LU604_RS05970;old_locus_tag=LU604_05970 NZ_CP089942.1 Protein Homology CDS 1135039 1136019 . - 0 ID=cds-WP_233480156.1;Parent=gene-LU604_RS05970;Dbxref=Genbank:WP_233480156.1;Name=WP_233480156.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190248.1;locus_tag=LU604_RS05970;product=tRNA-modifying protein YgfZ;protein_id=WP_233480156.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1136236 1136502 . + . ID=gene-LU604_RS05975;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=LU604_RS05975;old_locus_tag=LU604_05975 NZ_CP089942.1 Protein Homology CDS 1136236 1136502 . + 0 ID=cds-WP_016190247.1;Parent=gene-LU604_RS05975;Dbxref=Genbank:WP_016190247.1;Name=WP_016190247.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228693.1;locus_tag=LU604_RS05975;product=FAD assembly factor SdhE;protein_id=WP_016190247.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1136483 1136884 . + . ID=gene-LU604_RS05980;Name=LU604_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS05980;old_locus_tag=LU604_05980 NZ_CP089942.1 Protein Homology CDS 1136483 1136884 . + 0 ID=cds-WP_016190246.1;Parent=gene-LU604_RS05980;Dbxref=Genbank:WP_016190246.1;Name=WP_016190246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181233.1;locus_tag=LU604_RS05980;product=hypothetical protein;protein_id=WP_016190246.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1136994 1137512 . - . ID=gene-LU604_RS05985;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=LU604_RS05985;old_locus_tag=LU604_05985 NZ_CP089942.1 Protein Homology CDS 1136994 1137512 . - 0 ID=cds-WP_233480157.1;Parent=gene-LU604_RS05985;Dbxref=Genbank:WP_233480157.1;Name=WP_233480157.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155596.1;locus_tag=LU604_RS05985;product=flavodoxin FldB;protein_id=WP_233480157.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1137611 1138504 . + . ID=gene-LU604_RS05990;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=LU604_RS05990;old_locus_tag=LU604_05990 NZ_CP089942.1 Protein Homology CDS 1137611 1138504 . + 0 ID=cds-WP_016190244.1;Parent=gene-LU604_RS05990;Dbxref=Genbank:WP_016190244.1;Name=WP_016190244.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120813.1;locus_tag=LU604_RS05990;product=site-specific tyrosine recombinase XerD;protein_id=WP_016190244.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1138548 1139252 . + . ID=gene-LU604_RS05995;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=LU604_RS05995;old_locus_tag=LU604_05995 NZ_CP089942.1 Protein Homology CDS 1138548 1139252 . + 0 ID=cds-WP_016190243.1;Parent=gene-LU604_RS05995;Dbxref=Genbank:WP_016190243.1;Name=WP_016190243.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673664.1;locus_tag=LU604_RS05995;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_016190243.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1139258 1140976 . + . ID=gene-LU604_RS06000;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=LU604_RS06000;old_locus_tag=LU604_06000 NZ_CP089942.1 Protein Homology CDS 1139258 1140976 . + 0 ID=cds-WP_233480158.1;Parent=gene-LU604_RS06000;Dbxref=Genbank:WP_233480158.1;Name=WP_233480158.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168603.1;locus_tag=LU604_RS06000;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_233480158.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1141448 1142546 . + . ID=gene-LU604_RS06005;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=LU604_RS06005;old_locus_tag=LU604_06005 NZ_CP089942.1 Protein Homology CDS 1141448 1141522 . + 0 ID=cds-WP_152664187.1;Parent=gene-LU604_RS06005;Dbxref=Genbank:WP_152664187.1;Name=WP_152664187.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=LU604_RS06005;product=peptide chain release factor 2;protein_id=WP_152664187.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 1141524 1142546 . + 0 ID=cds-WP_152664187.1;Parent=gene-LU604_RS06005;Dbxref=Genbank:WP_152664187.1;Name=WP_152664187.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=LU604_RS06005;product=peptide chain release factor 2;protein_id=WP_152664187.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1142556 1144076 . + . ID=gene-LU604_RS06010;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=LU604_RS06010;old_locus_tag=LU604_06010 NZ_CP089942.1 Protein Homology CDS 1142556 1144076 . + 0 ID=cds-WP_016190240.1;Parent=gene-LU604_RS06010;Dbxref=Genbank:WP_016190240.1;Name=WP_016190240.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010248682.1;locus_tag=LU604_RS06010;product=lysine--tRNA ligase;protein_id=WP_016190240.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1144292 1144657 . + . ID=gene-LU604_RS06015;Name=LU604_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06015;old_locus_tag=LU604_06015 NZ_CP089942.1 Protein Homology CDS 1144292 1144657 . + 0 ID=cds-WP_233480159.1;Parent=gene-LU604_RS06015;Dbxref=Genbank:WP_233480159.1;Name=WP_233480159.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022362.2;locus_tag=LU604_RS06015;product=DUF2778 domain-containing protein;protein_id=WP_233480159.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1144585 1145073 . + . ID=gene-LU604_RS06020;Name=LU604_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06020;old_locus_tag=LU604_06020 NZ_CP089942.1 GeneMarkS-2+ CDS 1144585 1145073 . + 0 ID=cds-WP_233480899.1;Parent=gene-LU604_RS06020;Dbxref=Genbank:WP_233480899.1;Name=WP_233480899.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS06020;product=hypothetical protein;protein_id=WP_233480899.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1145785 1146947 . - . ID=gene-LU604_RS06025;Name=LU604_RS06025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06025;old_locus_tag=LU604_06025;pseudo=true NZ_CP089942.1 Protein Homology CDS 1145785 1146947 . - 0 ID=cds-LU604_RS06025;Parent=gene-LU604_RS06025;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612096.1;locus_tag=LU604_RS06025;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1147446 1148174 . + . ID=gene-LU604_RS06030;Name=LU604_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06030;old_locus_tag=LU604_06030 NZ_CP089942.1 Protein Homology CDS 1147446 1148174 . + 0 ID=cds-WP_232426817.1;Parent=gene-LU604_RS06030;Dbxref=Genbank:WP_232426817.1;Name=WP_232426817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011871451.1;locus_tag=LU604_RS06030;product=hypothetical protein;protein_id=WP_232426817.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1148167 1148874 . + . ID=gene-LU604_RS06035;Name=LU604_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06035;old_locus_tag=LU604_06035 NZ_CP089942.1 Protein Homology CDS 1148167 1148874 . + 0 ID=cds-WP_233480160.1;Parent=gene-LU604_RS06035;Dbxref=Genbank:WP_233480160.1;Name=WP_233480160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190237.1;locus_tag=LU604_RS06035;product=RES family NAD+ phosphorylase;protein_id=WP_233480160.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1148971 1149093 . + . ID=gene-LU604_RS26920;Name=LU604_RS26920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26920 NZ_CP089942.1 GeneMarkS-2+ CDS 1148971 1149093 . + 0 ID=cds-WP_256371722.1;Parent=gene-LU604_RS26920;Dbxref=Genbank:WP_256371722.1;Name=WP_256371722.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26920;product=hypothetical protein;protein_id=WP_256371722.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1149170 1149793 . - . ID=gene-LU604_RS06040;Name=LU604_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06040;old_locus_tag=LU604_06040 NZ_CP089942.1 Protein Homology CDS 1149170 1149793 . - 0 ID=cds-WP_233480161.1;Parent=gene-LU604_RS06040;Dbxref=Genbank:WP_233480161.1;Name=WP_233480161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155617.1;locus_tag=LU604_RS06040;product=serine protease;protein_id=WP_233480161.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1150324 1151399 . + . ID=gene-LU604_RS06045;Name=LU604_RS06045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06045;old_locus_tag=LU604_06045;pseudo=true NZ_CP089942.1 Protein Homology CDS 1150324 1151399 . + 0 ID=cds-LU604_RS06045;Parent=gene-LU604_RS06045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017349270.1;locus_tag=LU604_RS06045;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1151396 1152316 . - . ID=gene-LU604_RS06050;Name=LU604_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06050;old_locus_tag=LU604_06050 NZ_CP089942.1 Protein Homology CDS 1151396 1152316 . - 0 ID=cds-WP_016190234.1;Parent=gene-LU604_RS06050;Dbxref=Genbank:WP_016190234.1;Name=WP_016190234.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168608.1;locus_tag=LU604_RS06050;product=LysR family transcriptional regulator;protein_id=WP_016190234.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1152434 1153693 . + . ID=gene-LU604_RS06055;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=LU604_RS06055;old_locus_tag=LU604_06055 NZ_CP089942.1 Protein Homology CDS 1152434 1153693 . + 0 ID=cds-WP_016190233.1;Parent=gene-LU604_RS06055;Dbxref=Genbank:WP_016190233.1;Name=WP_016190233.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120805.1;locus_tag=LU604_RS06055;product=diaminopimelate decarboxylase;protein_id=WP_016190233.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1153702 1154703 . - . ID=gene-LU604_RS06060;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=LU604_RS06060;old_locus_tag=LU604_06060 NZ_CP089942.1 Protein Homology CDS 1153702 1154703 . - 0 ID=cds-WP_016190232.1;Parent=gene-LU604_RS06060;Dbxref=Genbank:WP_016190232.1;Name=WP_016190232.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669157.1;locus_tag=LU604_RS06060;product=HTH-type transcriptional regulator GalR;protein_id=WP_016190232.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1154895 1157115 . + . ID=gene-LU604_RS06065;Name=LU604_RS06065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06065;old_locus_tag=LU604_06065;pseudo=true NZ_CP089942.1 Protein Homology CDS 1154895 1157115 . + 0 ID=cds-LU604_RS06065;Parent=gene-LU604_RS06065;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669156.1;locus_tag=LU604_RS06065;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1157450 1159174 . + . ID=gene-LU604_RS06070;Name=LU604_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06070;old_locus_tag=LU604_06070 NZ_CP089942.1 Protein Homology CDS 1157450 1159174 . + 0 ID=cds-WP_233480752.1;Parent=gene-LU604_RS06070;Dbxref=Genbank:WP_233480752.1;Name=WP_233480752.1;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190231.1;locus_tag=LU604_RS06070;product=penicillin-binding transpeptidase domain-containing protein;protein_id=WP_233480752.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1159913 1160228 . + . ID=gene-LU604_RS06075;Name=LU604_RS06075;end_range=1160228,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06075;old_locus_tag=LU604_06075;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1159913 1160228 . + 0 ID=cds-LU604_RS06075;Parent=gene-LU604_RS06075;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1160228,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013510294.1;locus_tag=LU604_RS06075;partial=true;product=biotin/lipoyl-binding protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1160238 1161432 . + . ID=gene-LU604_RS06080;Name=LU604_RS06080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06080;old_locus_tag=LU604_06080;pseudo=true NZ_CP089942.1 Protein Homology CDS 1160238 1161432 . + 0 ID=cds-LU604_RS06080;Parent=gene-LU604_RS06080;Note=frameshifted%3B internal stop;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803561.1;locus_tag=LU604_RS06080;product=efflux transporter outer membrane subunit;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1161675 1163849 . + . ID=gene-LU604_RS06085;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=LU604_RS06085;old_locus_tag=LU604_06085 NZ_CP089942.1 Protein Homology CDS 1161675 1163849 . + 0 ID=cds-WP_233480162.1;Parent=gene-LU604_RS06085;Dbxref=Genbank:WP_233480162.1;Name=WP_233480162.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190228.1;locus_tag=LU604_RS06085;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_233480162.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1163827 1165038 . + . ID=gene-LU604_RS06090;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=LU604_RS06090;old_locus_tag=LU604_06090 NZ_CP089942.1 Protein Homology CDS 1163827 1165038 . + 0 ID=cds-WP_016190227.1;Parent=gene-LU604_RS06090;Dbxref=Genbank:WP_016190227.1;Name=WP_016190227.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539390.1;locus_tag=LU604_RS06090;product=lysophospholipid transporter LplT;protein_id=WP_016190227.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1165129 1166169 . - . ID=gene-LU604_RS06095;Name=LU604_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06095;old_locus_tag=LU604_06095 NZ_CP089942.1 Protein Homology CDS 1165129 1166169 . - 0 ID=cds-WP_233480163.1;Parent=gene-LU604_RS06095;Dbxref=Genbank:WP_233480163.1;Name=WP_233480163.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120804.1;locus_tag=LU604_RS06095;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_233480163.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1166470 1166685 . - . ID=gene-LU604_RS06100;Name=LU604_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06100;old_locus_tag=LU604_06100 NZ_CP089942.1 Protein Homology CDS 1166470 1166685 . - 0 ID=cds-WP_016190225.1;Parent=gene-LU604_RS06100;Dbxref=Genbank:WP_016190225.1;Name=WP_016190225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594481.1;locus_tag=LU604_RS06100;product=YgdI/YgdR family lipoprotein;protein_id=WP_016190225.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1166853 1167563 . - . ID=gene-LU604_RS06105;Name=LU604_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06105;old_locus_tag=LU604_06105 NZ_CP089942.1 Protein Homology CDS 1166853 1167563 . - 0 ID=cds-WP_233480164.1;Parent=gene-LU604_RS06105;Dbxref=Genbank:WP_233480164.1;Name=WP_233480164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010248654.1;locus_tag=LU604_RS06105;product=TerC family protein;protein_id=WP_233480164.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1167726 1168412 . - . ID=gene-LU604_RS06110;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=LU604_RS06110;old_locus_tag=LU604_06110 NZ_CP089942.1 Protein Homology CDS 1167726 1168412 . - 0 ID=cds-WP_233480165.1;Parent=gene-LU604_RS06110;Dbxref=Genbank:WP_233480165.1;Name=WP_233480165.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190223.1;locus_tag=LU604_RS06110;product=DNA mismatch repair endonuclease MutH;protein_id=WP_233480165.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1168719 1168931 . + . ID=gene-LU604_RS06115;Name=LU604_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06115;old_locus_tag=LU604_06115 NZ_CP089942.1 GeneMarkS-2+ CDS 1168719 1168931 . + 0 ID=cds-WP_233480166.1;Parent=gene-LU604_RS06115;Dbxref=Genbank:WP_233480166.1;Name=WP_233480166.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS06115;product=hypothetical protein;protein_id=WP_233480166.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1169089 1169613 . + . ID=gene-LU604_RS06120;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=LU604_RS06120;old_locus_tag=LU604_06120 NZ_CP089942.1 Protein Homology CDS 1169089 1169613 . + 0 ID=cds-WP_233480167.1;Parent=gene-LU604_RS06120;Dbxref=Genbank:WP_233480167.1;Name=WP_233480167.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311714.1;locus_tag=LU604_RS06120;product=RNA pyrophosphohydrolase;protein_id=WP_233480167.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1169626 1171872 . + . ID=gene-LU604_RS06125;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=LU604_RS06125;old_locus_tag=LU604_06125 NZ_CP089942.1 Protein Homology CDS 1169626 1171872 . + 0 ID=cds-WP_233480168.1;Parent=gene-LU604_RS06125;Dbxref=Genbank:WP_233480168.1;Name=WP_233480168.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016538050.1;locus_tag=LU604_RS06125;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_233480168.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1172054 1172935 . + . ID=gene-LU604_RS06130;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=LU604_RS06130;old_locus_tag=LU604_06130 NZ_CP089942.1 Protein Homology CDS 1172054 1172935 . + 0 ID=cds-WP_016190219.1;Parent=gene-LU604_RS06130;Dbxref=Genbank:WP_016190219.1;Name=WP_016190219.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155700.1;locus_tag=LU604_RS06130;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_016190219.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1172932 1173726 . + . ID=gene-LU604_RS06135;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=LU604_RS06135;old_locus_tag=LU604_06135 NZ_CP089942.1 Protein Homology CDS 1172932 1173726 . + 0 ID=cds-WP_016190218.1;Parent=gene-LU604_RS06135;Dbxref=Genbank:WP_016190218.1;Name=WP_016190218.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228599.1;locus_tag=LU604_RS06135;product=thymidylate synthase;protein_id=WP_016190218.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1174466 1175008 . - . ID=gene-LU604_RS06140;Name=LU604_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06140;old_locus_tag=LU604_06140 NZ_CP089942.1 Protein Homology CDS 1174466 1175008 . - 0 ID=cds-WP_233480169.1;Parent=gene-LU604_RS06140;Dbxref=Genbank:WP_233480169.1;Name=WP_233480169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190216.1;locus_tag=LU604_RS06140;product=AAA family ATPase;protein_id=WP_233480169.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1175005 1175169 . - . ID=gene-LU604_RS06145;Name=LU604_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06145;old_locus_tag=LU604_06145 NZ_CP089942.1 GeneMarkS-2+ CDS 1175005 1175169 . - 0 ID=cds-WP_233480170.1;Parent=gene-LU604_RS06145;Dbxref=Genbank:WP_233480170.1;Name=WP_233480170.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS06145;product=hypothetical protein;protein_id=WP_233480170.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1175271 1175657 . - . ID=gene-LU604_RS06150;Name=LU604_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06150;old_locus_tag=LU604_06150 NZ_CP089942.1 GeneMarkS-2+ CDS 1175271 1175657 . - 0 ID=cds-WP_233480171.1;Parent=gene-LU604_RS06150;Dbxref=Genbank:WP_233480171.1;Name=WP_233480171.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS06150;product=hypothetical protein;protein_id=WP_233480171.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1175700 1176944 . - . ID=gene-LU604_RS06155;Name=LU604_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06155;old_locus_tag=LU604_06155 NZ_CP089942.1 Protein Homology CDS 1175700 1176944 . - 0 ID=cds-WP_233480172.1;Parent=gene-LU604_RS06155;Dbxref=Genbank:WP_233480172.1;Name=WP_233480172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010300851.1;locus_tag=LU604_RS06155;product=aspartate aminotransferase family protein;protein_id=WP_233480172.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1176928 1177977 . - . ID=gene-LU604_RS06160;Name=LU604_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06160;old_locus_tag=LU604_06160 NZ_CP089942.1 Protein Homology CDS 1176928 1177977 . - 0 ID=cds-WP_233480173.1;Parent=gene-LU604_RS06160;Dbxref=Genbank:WP_233480173.1;Name=WP_233480173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010300857.1;locus_tag=LU604_RS06160;product=sulfotransferase;protein_id=WP_233480173.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1177970 1178806 . - . ID=gene-LU604_RS06165;Name=LU604_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06165;old_locus_tag=LU604_06165 NZ_CP089942.1 Protein Homology CDS 1177970 1178806 . - 0 ID=cds-WP_016190213.1;Parent=gene-LU604_RS06165;Dbxref=Genbank:WP_016190213.1;Name=WP_016190213.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010300859.1;locus_tag=LU604_RS06165;product=TauD/TfdA family dioxygenase;protein_id=WP_016190213.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1178966 1179733 . - . ID=gene-LU604_RS06170;Name=LU604_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06170;old_locus_tag=LU604_06170 NZ_CP089942.1 Protein Homology CDS 1178966 1179733 . - 0 ID=cds-WP_233480174.1;Parent=gene-LU604_RS06170;Dbxref=Genbank:WP_233480174.1;Name=WP_233480174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190212.1;locus_tag=LU604_RS06170;product=SDR family oxidoreductase;protein_id=WP_233480174.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1180395 1180844 . + . ID=gene-LU604_RS06175;Name=LU604_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06175;old_locus_tag=LU604_06175 NZ_CP089942.1 Protein Homology CDS 1180395 1180844 . + 0 ID=cds-WP_016190211.1;Parent=gene-LU604_RS06175;Dbxref=Genbank:WP_016190211.1;Name=WP_016190211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803575.1;locus_tag=LU604_RS06175;product=prepilin peptidase-dependent protein;protein_id=WP_016190211.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1180835 1181386 . + . ID=gene-LU604_RS06180;Name=LU604_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06180;old_locus_tag=LU604_06180 NZ_CP089942.1 Protein Homology CDS 1180835 1181386 . + 0 ID=cds-WP_040465320.1;Parent=gene-LU604_RS06180;Dbxref=Genbank:WP_040465320.1;Name=WP_040465320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168664.1;locus_tag=LU604_RS06180;product=prepilin peptidase-dependent protein;protein_id=WP_040465320.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1181419 1181805 . + . ID=gene-LU604_RS06185;Name=LU604_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06185;old_locus_tag=LU604_06185 NZ_CP089942.1 Protein Homology CDS 1181419 1181805 . + 0 ID=cds-WP_232426814.1;Parent=gene-LU604_RS06185;Dbxref=Genbank:WP_232426814.1;Name=WP_232426814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168665.1;locus_tag=LU604_RS06185;product=DUF2509 family protein;protein_id=WP_232426814.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1181798 1182094 . + . ID=gene-LU604_RS06190;Name=LU604_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06190;old_locus_tag=LU604_06190 NZ_CP089942.1 Protein Homology CDS 1181798 1182094 . + 0 ID=cds-WP_233480175.1;Parent=gene-LU604_RS06190;Dbxref=Genbank:WP_233480175.1;Name=WP_233480175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190208.1;locus_tag=LU604_RS06190;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_233480175.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1182436 1185804 . + . ID=gene-LU604_RS06195;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=LU604_RS06195;old_locus_tag=LU604_06195 NZ_CP089942.1 Protein Homology CDS 1182436 1185804 . + 0 ID=cds-WP_233480176.1;Parent=gene-LU604_RS06195;Dbxref=Genbank:WP_233480176.1;Name=WP_233480176.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190207.1;locus_tag=LU604_RS06195;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_233480176.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1185936 1188824 . + . ID=gene-LU604_RS06200;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=LU604_RS06200;old_locus_tag=LU604_06200 NZ_CP089942.1 Protein Homology CDS 1185936 1188824 . + 0 ID=cds-WP_233480177.1;Parent=gene-LU604_RS06200;Dbxref=Genbank:WP_233480177.1;Name=WP_233480177.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146518.1;locus_tag=LU604_RS06200;product=pitrilysin;protein_id=WP_233480177.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1188821 1192357 . + . ID=gene-LU604_RS06205;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=LU604_RS06205;old_locus_tag=LU604_06205 NZ_CP089942.1 Protein Homology CDS 1188821 1192357 . + 0 ID=cds-WP_233480178.1;Parent=gene-LU604_RS06205;Dbxref=Genbank:WP_233480178.1;Name=WP_233480178.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190205.1;locus_tag=LU604_RS06205;product=exodeoxyribonuclease V subunit beta;protein_id=WP_233480178.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1192354 1194201 . + . ID=gene-LU604_RS06210;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=LU604_RS06210;old_locus_tag=LU604_06210 NZ_CP089942.1 Protein Homology CDS 1192354 1194201 . + 0 ID=cds-WP_233480179.1;Parent=gene-LU604_RS06210;Dbxref=Genbank:WP_233480179.1;Name=WP_233480179.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190204.1;locus_tag=LU604_RS06210;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_233480179.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1194233 1194670 . - . ID=gene-LU604_RS06215;Name=LU604_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06215;old_locus_tag=LU604_06215 NZ_CP089942.1 Protein Homology CDS 1194233 1194670 . - 0 ID=cds-WP_016190203.1;Parent=gene-LU604_RS06215;Dbxref=Genbank:WP_016190203.1;Name=WP_016190203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668625.1;locus_tag=LU604_RS06215;product=hypothetical protein;protein_id=WP_016190203.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1194667 1195371 . - . ID=gene-LU604_RS06220;Name=LU604_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06220;old_locus_tag=LU604_06220 NZ_CP089942.1 Protein Homology CDS 1194667 1195371 . - 0 ID=cds-WP_233480180.1;Parent=gene-LU604_RS06220;Dbxref=Genbank:WP_233480180.1;Name=WP_233480180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539164.1;locus_tag=LU604_RS06220;product=hypothetical protein;protein_id=WP_233480180.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1195536 1196879 . - . ID=gene-LU604_RS06225;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=LU604_RS06225;old_locus_tag=LU604_06225 NZ_CP089942.1 Protein Homology CDS 1195536 1196879 . - 0 ID=cds-WP_233481531.1;Parent=gene-LU604_RS06225;Dbxref=Genbank:WP_233481531.1;Name=WP_233481531.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=acetyl-CoA:L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190201.1;locus_tag=LU604_RS06225;product=amino-acid N-acetyltransferase;protein_id=WP_233481531.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1197104 1198333 . + . ID=gene-LU604_RS06230;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=LU604_RS06230;old_locus_tag=LU604_06230 NZ_CP089942.1 Protein Homology CDS 1197104 1198333 . + 0 ID=cds-WP_233480182.1;Parent=gene-LU604_RS06230;Dbxref=Genbank:WP_233480182.1;Name=WP_233480182.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiC;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155735.1;locus_tag=LU604_RS06230;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_233480182.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1198420 1198496 . - . ID=gene-LU604_RS06235;Name=LU604_RS06235;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS06235;old_locus_tag=LU604_06235 NZ_CP089942.1 tRNAscan-SE tRNA 1198420 1198496 . - . ID=rna-LU604_RS06235;Parent=gene-LU604_RS06235;anticodon=(pos:complement(1198460..1198462));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS06235;product=tRNA-Met NZ_CP089942.1 tRNAscan-SE exon 1198420 1198496 . - . ID=exon-LU604_RS06235-1;Parent=rna-LU604_RS06235;anticodon=(pos:complement(1198460..1198462));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS06235;product=tRNA-Met NZ_CP089942.1 RefSeq gene 1198701 1199843 . + . ID=gene-LU604_RS06240;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=LU604_RS06240;old_locus_tag=LU604_06240 NZ_CP089942.1 Protein Homology CDS 1198701 1199843 . + 0 ID=cds-WP_233480183.1;Parent=gene-LU604_RS06240;Dbxref=Genbank:WP_233480183.1;Name=WP_233480183.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155737.1;locus_tag=LU604_RS06240;product=murein transglycosylase A;protein_id=WP_233480183.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1199897 1200697 . + . ID=gene-LU604_RS06245;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=LU604_RS06245;old_locus_tag=LU604_06245 NZ_CP089942.1 Protein Homology CDS 1199897 1200697 . + 0 ID=cds-WP_233480184.1;Parent=gene-LU604_RS06245;Dbxref=Genbank:WP_233480184.1;Name=WP_233480184.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190198.1;locus_tag=LU604_RS06245;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_233480184.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1200698 1201141 . - . ID=gene-LU604_RS06250;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=LU604_RS06250;old_locus_tag=LU604_06250 NZ_CP089942.1 Protein Homology CDS 1200698 1201141 . - 0 ID=cds-WP_082103764.1;Parent=gene-LU604_RS06250;Dbxref=Genbank:WP_082103764.1;Name=WP_082103764.1;Ontology_term=GO:0016226,GO:0031071;gbkey=CDS;gene=csdE;go_function=cysteine desulfurase activity|0031071||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203585.1;locus_tag=LU604_RS06250;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_082103764.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1201144 1202349 . - . ID=gene-LU604_RS06255;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=LU604_RS06255;old_locus_tag=LU604_06255 NZ_CP089942.1 Protein Homology CDS 1201144 1202349 . - 0 ID=cds-WP_016190196.1;Parent=gene-LU604_RS06255;Dbxref=Genbank:WP_016190196.1;Name=WP_016190196.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203584.1;locus_tag=LU604_RS06255;product=cysteine desulfurase CsdA;protein_id=WP_016190196.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1202560 1202757 . + . ID=gene-LU604_RS06260;Name=LU604_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06260;old_locus_tag=LU604_06260 NZ_CP089942.1 Protein Homology CDS 1202560 1202757 . + 0 ID=cds-WP_016190195.1;Parent=gene-LU604_RS06260;Dbxref=Genbank:WP_016190195.1;Name=WP_016190195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417289.2;locus_tag=LU604_RS06260;product=YgdI/YgdR family lipoprotein;protein_id=WP_016190195.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1202846 1203283 . - . ID=gene-LU604_RS06265;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS06265;old_locus_tag=LU604_06265 NZ_CP089942.1 Protein Homology CDS 1202846 1203283 . - 0 ID=cds-WP_046371975.1;Parent=gene-LU604_RS06265;Dbxref=Genbank:WP_046371975.1;Name=WP_046371975.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU604_RS06265;product=IS200/IS605 family transposase;protein_id=WP_046371975.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1203730 1204647 . + . ID=gene-LU604_RS06270;Name=LU604_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06270;old_locus_tag=LU604_06270 NZ_CP089942.1 Protein Homology CDS 1203730 1204647 . + 0 ID=cds-WP_016190193.1;Parent=gene-LU604_RS06270;Dbxref=Genbank:WP_016190193.1;Name=WP_016190193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190193.1;locus_tag=LU604_RS06270;product=transcriptional regulator GcvA;protein_id=WP_016190193.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1204698 1205093 . + . ID=gene-LU604_RS06275;Name=LU604_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06275;old_locus_tag=LU604_06275 NZ_CP089942.1 Protein Homology CDS 1204698 1205093 . + 0 ID=cds-WP_016190192.1;Parent=gene-LU604_RS06275;Dbxref=Genbank:WP_016190192.1;Name=WP_016190192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168685.1;locus_tag=LU604_RS06275;product=DUF423 domain-containing protein;protein_id=WP_016190192.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1205086 1206186 . + . ID=gene-LU604_RS06280;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=LU604_RS06280;old_locus_tag=LU604_06280 NZ_CP089942.1 Protein Homology CDS 1205086 1206186 . + 0 ID=cds-WP_233480185.1;Parent=gene-LU604_RS06280;Dbxref=Genbank:WP_233480185.1;Name=WP_233480185.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=LU604_RS06280;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_233480185.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1206221 1206985 . - . ID=gene-LU604_RS06285;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=LU604_RS06285;old_locus_tag=LU604_06285 NZ_CP089942.1 Protein Homology CDS 1206221 1206985 . - 0 ID=cds-WP_233481532.1;Parent=gene-LU604_RS06285;Dbxref=Genbank:WP_233481532.1;Name=WP_233481532.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190190.1;locus_tag=LU604_RS06285;product=flap endonuclease Xni;protein_id=WP_233481532.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1207028 1208386 . - . ID=gene-LU604_RS06290;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=LU604_RS06290;old_locus_tag=LU604_06290 NZ_CP089942.1 Protein Homology CDS 1207028 1208386 . - 0 ID=cds-WP_016190189.1;Parent=gene-LU604_RS06290;Dbxref=Genbank:WP_016190189.1;Name=WP_016190189.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854629.1;locus_tag=LU604_RS06290;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_016190189.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1208577 1209422 . - . ID=gene-LU604_RS06295;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=LU604_RS06295;old_locus_tag=LU604_06295 NZ_CP089942.1 Protein Homology CDS 1208577 1209422 . - 0 ID=cds-WP_233480187.1;Parent=gene-LU604_RS06295;Dbxref=Genbank:WP_233480187.1;Name=WP_233480187.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543431.1;locus_tag=LU604_RS06295;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_233480187.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1209565 1210140 . + . ID=gene-LU604_RS06300;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=LU604_RS06300;old_locus_tag=LU604_06300 NZ_CP089942.1 Protein Homology CDS 1209565 1210140 . + 0 ID=cds-WP_040465418.1;Parent=gene-LU604_RS06300;Dbxref=Genbank:WP_040465418.1;Name=WP_040465418.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013510259.1;locus_tag=LU604_RS06300;product=SecY-interacting protein;protein_id=WP_040465418.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1210693 1211016 . + . ID=gene-LU604_RS06305;Name=LU604_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06305;old_locus_tag=LU604_06305 NZ_CP089942.1 Protein Homology CDS 1210693 1211016 . + 0 ID=cds-WP_233480188.1;Parent=gene-LU604_RS06305;Dbxref=Genbank:WP_233480188.1;Name=WP_233480188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190186.1;locus_tag=LU604_RS06305;product=YqcC family protein;protein_id=WP_233480188.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1211016 1211795 . + . ID=gene-LU604_RS06310;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=LU604_RS06310;old_locus_tag=LU604_06310 NZ_CP089942.1 Protein Homology CDS 1211016 1211795 . + 0 ID=cds-WP_233481533.1;Parent=gene-LU604_RS06310;Dbxref=Genbank:WP_233481533.1;Name=WP_233481533.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190185.1;locus_tag=LU604_RS06310;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_233481533.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1211817 1212266 . + . ID=gene-LU604_RS06315;Name=LU604_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06315;old_locus_tag=LU604_06315 NZ_CP089942.1 Protein Homology CDS 1211817 1212266 . + 0 ID=cds-WP_016190184.1;Parent=gene-LU604_RS06315;Dbxref=Genbank:WP_016190184.1;Name=WP_016190184.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019104737.1;locus_tag=LU604_RS06315;product=flavodoxin;protein_id=WP_016190184.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1212310 1213869 . - . ID=gene-LU604_RS06320;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=LU604_RS06320;old_locus_tag=LU604_06320 NZ_CP089942.1 Protein Homology CDS 1212310 1213869 . - 0 ID=cds-WP_233480189.1;Parent=gene-LU604_RS06320;Dbxref=Genbank:WP_233480189.1;Name=WP_233480189.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203572.1;locus_tag=LU604_RS06320;product=galactarate dehydratase;protein_id=WP_233480189.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1214376 1215719 . + . ID=gene-LU604_RS06325;Name=LU604_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06325;old_locus_tag=LU604_06325 NZ_CP089942.1 Protein Homology CDS 1214376 1215719 . + 0 ID=cds-WP_233480190.1;Parent=gene-LU604_RS06325;Dbxref=Genbank:WP_233480190.1;Name=WP_233480190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203570.1;locus_tag=LU604_RS06325;product=MFS transporter;protein_id=WP_233480190.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1215730 1217067 . + . ID=gene-LU604_RS06330;Name=LU604_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06330;old_locus_tag=LU604_06330 NZ_CP089942.1 Protein Homology CDS 1215730 1217067 . + 0 ID=cds-WP_233480191.1;Parent=gene-LU604_RS06330;Dbxref=Genbank:WP_233480191.1;Name=WP_233480191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803607.1;locus_tag=LU604_RS06330;product=glucarate dehydratase family protein;protein_id=WP_233480191.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1217095 1218435 . + . ID=gene-LU604_RS06335;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=LU604_RS06335;old_locus_tag=LU604_06335 NZ_CP089942.1 Protein Homology CDS 1217095 1218435 . + 0 ID=cds-WP_233480192.1;Parent=gene-LU604_RS06335;Dbxref=Genbank:WP_233480192.1;Name=WP_233480192.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833097.1;locus_tag=LU604_RS06335;product=glucarate dehydratase;protein_id=WP_233480192.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1218453 1219223 . + . ID=gene-LU604_RS06340;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=LU604_RS06340;old_locus_tag=LU604_06340 NZ_CP089942.1 Protein Homology CDS 1218453 1219223 . + 0 ID=cds-WP_233480193.1;Parent=gene-LU604_RS06340;Dbxref=Genbank:WP_233480193.1;Name=WP_233480193.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706972.1;locus_tag=LU604_RS06340;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_233480193.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1219246 1220130 . + . ID=gene-LU604_RS06345;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=LU604_RS06345;old_locus_tag=LU604_06345 NZ_CP089942.1 Protein Homology CDS 1219246 1220130 . + 0 ID=cds-WP_016190176.1;Parent=gene-LU604_RS06345;Dbxref=Genbank:WP_016190176.1;Name=WP_016190176.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417594.3;locus_tag=LU604_RS06345;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_016190176.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1220201 1221346 . + . ID=gene-LU604_RS06350;Name=LU604_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06350;old_locus_tag=LU604_06350 NZ_CP089942.1 Protein Homology CDS 1220201 1221346 . + 0 ID=cds-WP_233480194.1;Parent=gene-LU604_RS06350;Dbxref=Genbank:WP_233480194.1;Name=WP_233480194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382830.1;locus_tag=LU604_RS06350;product=glycerate kinase;protein_id=WP_233480194.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1221389 1224115 . - . ID=gene-LU604_RS06355;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=LU604_RS06355;old_locus_tag=LU604_06355 NZ_CP089942.1 Protein Homology CDS 1221389 1224115 . - 0 ID=cds-WP_233481534.1;Parent=gene-LU604_RS06355;Dbxref=Genbank:WP_233481534.1;Name=WP_233481534.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190174.1;locus_tag=LU604_RS06355;product=two-component sensor histidine kinase BarA;protein_id=WP_233481534.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1224228 1225565 . + . ID=gene-LU604_RS06360;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=LU604_RS06360;old_locus_tag=LU604_06360 NZ_CP089942.1 Protein Homology CDS 1224228 1225565 . + 0 ID=cds-WP_233481535.1;Parent=gene-LU604_RS06360;Dbxref=Genbank:WP_233481535.1;Name=WP_233481535.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434614.1;locus_tag=LU604_RS06360;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_233481535.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1225579 1227807 . + . ID=gene-LU604_RS06365;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=LU604_RS06365;old_locus_tag=LU604_06365 NZ_CP089942.1 Protein Homology CDS 1225579 1227807 . + 0 ID=cds-WP_016190172.1;Parent=gene-LU604_RS06365;Dbxref=Genbank:WP_016190172.1;Name=WP_016190172.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854613.1;locus_tag=LU604_RS06365;product=GTP diphosphokinase;protein_id=WP_016190172.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1227788 1228006 . + . ID=gene-LU604_RS06370;Name=LU604_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06370;old_locus_tag=LU604_06370 NZ_CP089942.1 GeneMarkS-2+ CDS 1227788 1228006 . + 0 ID=cds-WP_016190171.1;Parent=gene-LU604_RS06370;Dbxref=Genbank:WP_016190171.1;Name=WP_016190171.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS06370;product=hypothetical protein;protein_id=WP_016190171.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1228009 1228791 . + . ID=gene-LU604_RS06375;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=LU604_RS06375;old_locus_tag=LU604_06375 NZ_CP089942.1 Protein Homology CDS 1228009 1228791 . + 0 ID=cds-WP_233480196.1;Parent=gene-LU604_RS06375;Dbxref=Genbank:WP_233480196.1;Name=WP_233480196.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190170.1;locus_tag=LU604_RS06375;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_233480196.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1229003 1230640 . + . ID=gene-LU604_RS06380;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=LU604_RS06380;old_locus_tag=LU604_06380 NZ_CP089942.1 Protein Homology CDS 1229003 1230640 . + 0 ID=cds-WP_233480197.1;Parent=gene-LU604_RS06380;Dbxref=Genbank:WP_233480197.1;Name=WP_233480197.1;Ontology_term=GO:0009220,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=LU604_RS06380;product=CTP synthase (glutamine hydrolyzing);protein_id=WP_233480197.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1230717 1232012 . + . ID=gene-LU604_RS06385;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=LU604_RS06385;old_locus_tag=LU604_06385 NZ_CP089942.1 Protein Homology CDS 1230717 1232012 . + 0 ID=cds-WP_233480198.1;Parent=gene-LU604_RS06385;Dbxref=Genbank:WP_233480198.1;Name=WP_233480198.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005243.1;locus_tag=LU604_RS06385;product=phosphopyruvate hydratase;protein_id=WP_233480198.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1232247 1233104 . + . ID=gene-LU604_RS06390;Name=LU604_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06390;old_locus_tag=LU604_06390 NZ_CP089942.1 Protein Homology CDS 1232247 1233104 . + 0 ID=cds-WP_233480199.1;Parent=gene-LU604_RS06390;Dbxref=Genbank:WP_233480199.1;Name=WP_233480199.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013884.2;locus_tag=LU604_RS06390;product=acyltransferase;protein_id=WP_233480199.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1233094 1233348 . + . ID=gene-LU604_RS06395;Name=LU604_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06395;old_locus_tag=LU604_06395 NZ_CP089942.1 GeneMarkS-2+ CDS 1233094 1233348 . + 0 ID=cds-WP_233480200.1;Parent=gene-LU604_RS06395;Dbxref=Genbank:WP_233480200.1;Name=WP_233480200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS06395;product=hypothetical protein;protein_id=WP_233480200.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1233399 1234076 . + . ID=gene-LU604_RS06400;Name=LU604_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06400;old_locus_tag=LU604_06400 NZ_CP089942.1 Protein Homology CDS 1233399 1234076 . + 0 ID=cds-WP_233480201.1;Parent=gene-LU604_RS06400;Dbxref=Genbank:WP_233480201.1;Name=WP_233480201.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039218.1;locus_tag=LU604_RS06400;product=SGNH hydrolase domain-containing protein;protein_id=WP_233480201.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1234192 1234863 . + . ID=gene-LU604_RS06405;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=LU604_RS06405;old_locus_tag=LU604_06405 NZ_CP089942.1 Protein Homology CDS 1234192 1234863 . + 0 ID=cds-WP_233480202.1;Parent=gene-LU604_RS06405;Dbxref=Genbank:WP_233480202.1;Name=WP_233480202.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442421.1;locus_tag=LU604_RS06405;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_233480202.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1234880 1235242 . - . ID=gene-LU604_RS06410;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=LU604_RS06410;old_locus_tag=LU604_06410 NZ_CP089942.1 Protein Homology CDS 1234880 1235242 . - 0 ID=cds-WP_233480203.1;Parent=gene-LU604_RS06410;Dbxref=Genbank:WP_233480203.1;Name=WP_233480203.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190166.1;locus_tag=LU604_RS06410;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_233480203.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1235548 1237341 . + . ID=gene-LU604_RS06415;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=LU604_RS06415;old_locus_tag=LU604_06415 NZ_CP089942.1 Protein Homology CDS 1235548 1237341 . + 0 ID=cds-WP_233480204.1;Parent=gene-LU604_RS06415;Dbxref=Genbank:WP_233480204.1;Name=WP_233480204.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669069.1;locus_tag=LU604_RS06415;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_233480204.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1237341 1239056 . + . ID=gene-LU604_RS06420;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=LU604_RS06420;old_locus_tag=LU604_06420 NZ_CP089942.1 Protein Homology CDS 1237341 1239056 . + 0 ID=cds-WP_233480205.1;Parent=gene-LU604_RS06420;Dbxref=Genbank:WP_233480205.1;Name=WP_233480205.1;Ontology_term=GO:0000103,GO:0004783;gbkey=CDS;gene=cysI;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543446.1;locus_tag=LU604_RS06420;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_233480205.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1239069 1239800 . + . ID=gene-LU604_RS06425;Name=LU604_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06425;old_locus_tag=LU604_06425 NZ_CP089942.1 Protein Homology CDS 1239069 1239800 . + 0 ID=cds-WP_233480206.1;Parent=gene-LU604_RS06425;Dbxref=Genbank:WP_233480206.1;Name=WP_233480206.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203552.1;locus_tag=LU604_RS06425;product=phosphoadenylyl-sulfate reductase;protein_id=WP_233480206.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1240236 1240445 . - . ID=gene-LU604_RS06430;Name=LU604_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06430;old_locus_tag=LU604_06430 NZ_CP089942.1 Protein Homology CDS 1240236 1240445 . - 0 ID=cds-WP_233480207.1;Parent=gene-LU604_RS06430;Dbxref=Genbank:WP_233480207.1;Name=WP_233480207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190161.1;locus_tag=LU604_RS06430;product=hypothetical protein;protein_id=WP_233480207.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1240804 1242219 . + . ID=gene-LU604_RS06435;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=LU604_RS06435;old_locus_tag=LU604_06435 NZ_CP089942.1 Protein Homology CDS 1240804 1242219 . + 0 ID=cds-WP_016190160.1;Parent=gene-LU604_RS06435;Dbxref=Genbank:WP_016190160.1;Name=WP_016190160.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019104720.1;locus_tag=LU604_RS06435;product=siroheme synthase CysG;protein_id=WP_016190160.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1242229 1243137 . + . ID=gene-LU604_RS06440;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=LU604_RS06440;old_locus_tag=LU604_06440 NZ_CP089942.1 Protein Homology CDS 1242229 1243137 . + 0 ID=cds-WP_016190159.1;Parent=gene-LU604_RS06440;Dbxref=Genbank:WP_016190159.1;Name=WP_016190159.1;Ontology_term=GO:0019419,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate reduction|0019419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=LU604_RS06440;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_016190159.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1243147 1244574 . + . ID=gene-LU604_RS06445;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=LU604_RS06445;old_locus_tag=LU604_06445 NZ_CP089942.1 Protein Homology CDS 1243147 1244574 . + 0 ID=cds-WP_016190158.1;Parent=gene-LU604_RS06445;Dbxref=Genbank:WP_016190158.1;Name=WP_016190158.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007893233.1;locus_tag=LU604_RS06445;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_016190158.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1244574 1245179 . + . ID=gene-LU604_RS06450;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=LU604_RS06450;old_locus_tag=LU604_06450 NZ_CP089942.1 Protein Homology CDS 1244574 1245179 . + 0 ID=cds-WP_016190157.1;Parent=gene-LU604_RS06450;Dbxref=Genbank:WP_016190157.1;Name=WP_016190157.1;Ontology_term=GO:0006790,GO:0004020;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228487.1;locus_tag=LU604_RS06450;product=adenylyl-sulfate kinase;protein_id=WP_016190157.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1245235 1245555 . + . ID=gene-LU604_RS06455;Name=LU604_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06455;old_locus_tag=LU604_06455 NZ_CP089942.1 Protein Homology CDS 1245235 1245555 . + 0 ID=cds-WP_016190156.1;Parent=gene-LU604_RS06455;Dbxref=Genbank:WP_016190156.1;Name=WP_016190156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155824.1;locus_tag=LU604_RS06455;product=DUF3561 family protein;protein_id=WP_016190156.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1245741 1246061 . + . ID=gene-LU604_RS06460;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=LU604_RS06460;old_locus_tag=LU604_06460 NZ_CP089942.1 Protein Homology CDS 1245741 1246061 . + 0 ID=cds-WP_016190155.1;Parent=gene-LU604_RS06460;Dbxref=Genbank:WP_016190155.1;Name=WP_016190155.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203544.1;locus_tag=LU604_RS06460;product=cell division protein FtsB;protein_id=WP_016190155.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1246065 1246781 . + . ID=gene-LU604_RS06465;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=LU604_RS06465;old_locus_tag=LU604_06465 NZ_CP089942.1 Protein Homology CDS 1246065 1246781 . + 0 ID=cds-WP_233480208.1;Parent=gene-LU604_RS06465;Dbxref=Genbank:WP_233480208.1;Name=WP_233480208.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190154.1;locus_tag=LU604_RS06465;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_233480208.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1246781 1247260 . + . ID=gene-LU604_RS06470;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=LU604_RS06470;old_locus_tag=LU604_06470 NZ_CP089942.1 Protein Homology CDS 1246781 1247260 . + 0 ID=cds-WP_016190153.1;Parent=gene-LU604_RS06470;Dbxref=Genbank:WP_016190153.1;Name=WP_016190153.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803637.1;locus_tag=LU604_RS06470;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_016190153.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1247260 1248309 . + . ID=gene-LU604_RS06475;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=LU604_RS06475;old_locus_tag=LU604_06475 NZ_CP089942.1 Protein Homology CDS 1247260 1248309 . + 0 ID=cds-WP_016190152.1;Parent=gene-LU604_RS06475;Dbxref=Genbank:WP_016190152.1;Name=WP_016190152.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015670984.1;locus_tag=LU604_RS06475;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_016190152.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1248866 1249627 . + . ID=gene-LU604_RS06480;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=LU604_RS06480;old_locus_tag=LU604_06480 NZ_CP089942.1 Protein Homology CDS 1248866 1249627 . + 0 ID=cds-WP_016190151.1;Parent=gene-LU604_RS06480;Dbxref=Genbank:WP_016190151.1;Name=WP_016190151.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442402.1;locus_tag=LU604_RS06480;product=5'/3'-nucleotidase SurE;protein_id=WP_016190151.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1249621 1250247 . + . ID=gene-LU604_RS06485;Name=LU604_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06485;old_locus_tag=LU604_06485 NZ_CP089942.1 Protein Homology CDS 1249621 1250247 . + 0 ID=cds-WP_016190150.1;Parent=gene-LU604_RS06485;Dbxref=Genbank:WP_016190150.1;Name=WP_016190150.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461847.1;locus_tag=LU604_RS06485;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_016190150.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1250391 1251506 . + . ID=gene-LU604_RS06490;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=LU604_RS06490;old_locus_tag=LU604_06490 NZ_CP089942.1 Protein Homology CDS 1250391 1251506 . + 0 ID=cds-WP_233480209.1;Parent=gene-LU604_RS06490;Dbxref=Genbank:WP_233480209.1;Name=WP_233480209.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019104718.1;locus_tag=LU604_RS06490;product=murein hydrolase activator NlpD;protein_id=WP_233480209.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1251557 1252552 . + . ID=gene-LU604_RS06495;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=LU604_RS06495;old_locus_tag=LU604_06495 NZ_CP089942.1 Protein Homology CDS 1251557 1252552 . + 0 ID=cds-WP_016190148.1;Parent=gene-LU604_RS06495;Dbxref=Genbank:WP_016190148.1;Name=WP_016190148.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=LU604_RS06495;product=RNA polymerase sigma factor RpoS;protein_id=WP_016190148.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1253427 1255988 . - . ID=gene-LU604_RS06500;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=LU604_RS06500;old_locus_tag=LU604_06500 NZ_CP089942.1 Protein Homology CDS 1253427 1255988 . - 0 ID=cds-WP_016190147.1;Parent=gene-LU604_RS06500;Dbxref=Genbank:WP_016190147.1;Name=WP_016190147.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442398.1;locus_tag=LU604_RS06500;product=DNA mismatch repair protein MutS;protein_id=WP_016190147.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1256222 1257502 . + . ID=gene-LU604_RS06505;Name=LU604_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06505;old_locus_tag=LU604_06505 NZ_CP089942.1 Protein Homology CDS 1256222 1257502 . + 0 ID=cds-WP_233480210.1;Parent=gene-LU604_RS06505;Dbxref=Genbank:WP_233480210.1;Name=WP_233480210.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190146.1;locus_tag=LU604_RS06505;product=site-specific integrase;protein_id=WP_233480210.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1257801 1258175 . + . ID=gene-LU604_RS06510;Name=LU604_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06510;old_locus_tag=LU604_06510 NZ_CP089942.1 GeneMarkS-2+ CDS 1257801 1258175 . + 0 ID=cds-WP_016190145.1;Parent=gene-LU604_RS06510;Dbxref=Genbank:WP_016190145.1;Name=WP_016190145.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS06510;product=hypothetical protein;protein_id=WP_016190145.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1258185 1258595 . + . ID=gene-LU604_RS06515;Name=LU604_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06515;old_locus_tag=LU604_06515 NZ_CP089942.1 GeneMarkS-2+ CDS 1258185 1258595 . + 0 ID=cds-WP_233480211.1;Parent=gene-LU604_RS06515;Dbxref=Genbank:WP_233480211.1;Name=WP_233480211.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS06515;product=hypothetical protein;protein_id=WP_233480211.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1258719 1259027 . - . ID=gene-LU604_RS06520;Name=LU604_RS06520;end_range=1259027,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06520;old_locus_tag=LU604_06520;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1258719 1259027 . - 0 ID=cds-LU604_RS06520;Parent=gene-LU604_RS06520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1259027,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU604_RS06520;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1259101 1260221 . + . ID=gene-LU604_RS06525;Name=LU604_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06525;old_locus_tag=LU604_06525 NZ_CP089942.1 Protein Homology CDS 1259101 1259359 . + 0 ID=cds-WP_233480212.1;Parent=gene-LU604_RS06525;Dbxref=Genbank:WP_233480212.1;Name=WP_233480212.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS06525;product=IS3 family transposase;protein_id=WP_233480212.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 1259359 1260221 . + 2 ID=cds-WP_233480212.1;Parent=gene-LU604_RS06525;Dbxref=Genbank:WP_233480212.1;Name=WP_233480212.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS06525;product=IS3 family transposase;protein_id=WP_233480212.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1260316 1261303 . + . ID=gene-LU604_RS06530;Name=LU604_RS06530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06530;old_locus_tag=LU604_06530;pseudo=true NZ_CP089942.1 Protein Homology CDS 1260316 1261303 . + 0 ID=cds-LU604_RS06530;Parent=gene-LU604_RS06530;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004173063.1;locus_tag=LU604_RS06530;product=aldo/keto reductase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1261459 1261800 . + . ID=gene-LU604_RS06535;Name=LU604_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06535;old_locus_tag=LU604_06535 NZ_CP089942.1 Protein Homology CDS 1261459 1261800 . + 0 ID=cds-WP_233480213.1;Parent=gene-LU604_RS06535;Dbxref=Genbank:WP_233480213.1;Name=WP_233480213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008101350.1;locus_tag=LU604_RS06535;product=zinc ABC transporter substrate-binding protein;protein_id=WP_233480213.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1261854 1263086 . - . ID=gene-LU604_RS06540;Name=LU604_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06540;old_locus_tag=LU604_06540 NZ_CP089942.1 Protein Homology CDS 1261854 1263086 . - 0 ID=cds-WP_016190141.1;Parent=gene-LU604_RS06540;Dbxref=Genbank:WP_016190141.1;Name=WP_016190141.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013026627.1;locus_tag=LU604_RS06540;product=Nramp family divalent metal transporter;protein_id=WP_016190141.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1263443 1264627 . + . ID=gene-LU604_RS06545;Name=LU604_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06545;old_locus_tag=LU604_06545 NZ_CP089942.1 Protein Homology CDS 1263443 1264627 . + 0 ID=cds-WP_016190140.1;Parent=gene-LU604_RS06545;Dbxref=Genbank:WP_016190140.1;Name=WP_016190140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376337.1;locus_tag=LU604_RS06545;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_016190140.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1264769 1264844 . - . ID=gene-LU604_RS06550;Name=LU604_RS06550;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS06550;old_locus_tag=LU604_06550 NZ_CP089942.1 tRNAscan-SE tRNA 1264769 1264844 . - . ID=rna-LU604_RS06550;Parent=gene-LU604_RS06550;anticodon=(pos:complement(1264809..1264811));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS06550;product=tRNA-Ala NZ_CP089942.1 tRNAscan-SE exon 1264769 1264844 . - . ID=exon-LU604_RS06550-1;Parent=rna-LU604_RS06550;anticodon=(pos:complement(1264809..1264811));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS06550;product=tRNA-Ala NZ_CP089942.1 RefSeq gene 1264889 1264964 . - . ID=gene-LU604_RS06555;Name=LU604_RS06555;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS06555;old_locus_tag=LU604_06555 NZ_CP089942.1 tRNAscan-SE tRNA 1264889 1264964 . - . ID=rna-LU604_RS06555;Parent=gene-LU604_RS06555;anticodon=(pos:complement(1264929..1264931));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS06555;product=tRNA-Ala NZ_CP089942.1 tRNAscan-SE exon 1264889 1264964 . - . ID=exon-LU604_RS06555-1;Parent=rna-LU604_RS06555;anticodon=(pos:complement(1264929..1264931));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS06555;product=tRNA-Ala NZ_CP089942.1 RefSeq pseudogene 1265386 1266233 . + . ID=gene-LU604_RS06560;Name=LU604_RS06560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06560;old_locus_tag=LU604_06560;pseudo=true NZ_CP089942.1 Protein Homology CDS 1265386 1266233 . + 0 ID=cds-LU604_RS06560;Parent=gene-LU604_RS06560;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190139.1;locus_tag=LU604_RS06560;product=formate/nitrite transporter family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1266313 1266672 . + . ID=gene-LU604_RS06565;Name=LU604_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06565;old_locus_tag=LU604_06565 NZ_CP089942.1 Protein Homology CDS 1266313 1266672 . + 0 ID=cds-WP_016190138.1;Parent=gene-LU604_RS06565;Dbxref=Genbank:WP_016190138.1;Name=WP_016190138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509982.1;locus_tag=LU604_RS06565;product=putative DNA-binding transcriptional regulator;protein_id=WP_016190138.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1267607 1268608 . + . ID=gene-LU604_RS06570;Name=LU604_RS06570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06570;old_locus_tag=LU604_06570;pseudo=true NZ_CP089942.1 Protein Homology CDS 1267607 1268608 . + 0 ID=cds-LU604_RS06570;Parent=gene-LU604_RS06570;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315785.1;locus_tag=LU604_RS06570;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1268899 1270311 . - . ID=gene-LU604_RS06575;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=LU604_RS06575;old_locus_tag=LU604_06575 NZ_CP089942.1 Protein Homology CDS 1268899 1270311 . - 0 ID=cds-WP_016190137.1;Parent=gene-LU604_RS06575;Dbxref=Genbank:WP_016190137.1;Name=WP_016190137.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017345327.1;locus_tag=LU604_RS06575;product=glutamate--tRNA ligase;protein_id=WP_016190137.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1270584 1270659 . + . ID=gene-LU604_RS06580;Name=LU604_RS06580;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS06580;old_locus_tag=LU604_06580 NZ_CP089942.1 tRNAscan-SE tRNA 1270584 1270659 . + . ID=rna-LU604_RS06580;Parent=gene-LU604_RS06580;anticodon=(pos:1270617..1270619);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS06580;product=tRNA-Val NZ_CP089942.1 tRNAscan-SE exon 1270584 1270659 . + . ID=exon-LU604_RS06580-1;Parent=rna-LU604_RS06580;anticodon=(pos:1270617..1270619);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS06580;product=tRNA-Val NZ_CP089942.1 RefSeq gene 1270709 1270784 . + . ID=gene-LU604_RS06585;Name=LU604_RS06585;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS06585;old_locus_tag=LU604_06585 NZ_CP089942.1 tRNAscan-SE tRNA 1270709 1270784 . + . ID=rna-LU604_RS06585;Parent=gene-LU604_RS06585;anticodon=(pos:1270742..1270744);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS06585;product=tRNA-Val NZ_CP089942.1 tRNAscan-SE exon 1270709 1270784 . + . ID=exon-LU604_RS06585-1;Parent=rna-LU604_RS06585;anticodon=(pos:1270742..1270744);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS06585;product=tRNA-Val NZ_CP089942.1 RefSeq gene 1270815 1270890 . + . ID=gene-LU604_RS06590;Name=LU604_RS06590;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS06590;old_locus_tag=LU604_06590 NZ_CP089942.1 tRNAscan-SE tRNA 1270815 1270890 . + . ID=rna-LU604_RS06590;Parent=gene-LU604_RS06590;anticodon=(pos:1270848..1270850);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS06590;product=tRNA-Val NZ_CP089942.1 tRNAscan-SE exon 1270815 1270890 . + . ID=exon-LU604_RS06590-1;Parent=rna-LU604_RS06590;anticodon=(pos:1270848..1270850);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS06590;product=tRNA-Val NZ_CP089942.1 RefSeq gene 1270895 1270970 . + . ID=gene-LU604_RS06595;Name=LU604_RS06595;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS06595;old_locus_tag=LU604_06595 NZ_CP089942.1 tRNAscan-SE tRNA 1270895 1270970 . + . ID=rna-LU604_RS06595;Parent=gene-LU604_RS06595;anticodon=(pos:1270928..1270930);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS06595;product=tRNA-Lys NZ_CP089942.1 tRNAscan-SE exon 1270895 1270970 . + . ID=exon-LU604_RS06595-1;Parent=rna-LU604_RS06595;anticodon=(pos:1270928..1270930);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS06595;product=tRNA-Lys NZ_CP089942.1 RefSeq gene 1271271 1271393 . + . ID=gene-LU604_RS06600;Name=LU604_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06600;old_locus_tag=LU604_06600 NZ_CP089942.1 Protein Homology CDS 1271271 1271393 . + 0 ID=cds-WP_232426810.1;Parent=gene-LU604_RS06600;Dbxref=Genbank:WP_232426810.1;Name=WP_232426810.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025640.2;locus_tag=LU604_RS06600;product=FlxA-like family protein;protein_id=WP_232426810.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1271646 1272449 . - . ID=gene-LU604_RS06605;Name=LU604_RS06605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06605;old_locus_tag=LU604_06605;partial=true;pseudo=true;start_range=.,1271646 NZ_CP089942.1 Protein Homology CDS 1271646 1272449 . - 0 ID=cds-LU604_RS06605;Parent=gene-LU604_RS06605;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015699782.1;locus_tag=LU604_RS06605;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,1271646;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1272525 1273237 . + . ID=gene-LU604_RS06610;Name=LU604_RS06610;end_range=1273237,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06610;old_locus_tag=LU604_06610;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1272525 1273237 . + 0 ID=cds-LU604_RS06610;Parent=gene-LU604_RS06610;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1273237,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS06610;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1273386 1274392 . + . ID=gene-LU604_RS06615;Name=LU604_RS06615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06615;old_locus_tag=LU604_06615;pseudo=true NZ_CP089942.1 Protein Homology CDS 1273386 1274392 . + 0 ID=cds-LU604_RS06615;Parent=gene-LU604_RS06615;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000878026.1;locus_tag=LU604_RS06615;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1274666 1274974 . + . ID=gene-LU604_RS06620;Name=LU604_RS06620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06620;old_locus_tag=LU604_06620;partial=true;pseudo=true;start_range=.,1274666 NZ_CP089942.1 Protein Homology CDS 1274666 1274974 . + 0 ID=cds-LU604_RS06620;Parent=gene-LU604_RS06620;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS06620;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,1274666;transl_table=11 NZ_CP089942.1 RefSeq gene 1275041 1275544 . - . ID=gene-LU604_RS06625;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=LU604_RS06625;old_locus_tag=LU604_06625 NZ_CP089942.1 Protein Homology CDS 1275041 1275544 . - 0 ID=cds-WP_016190134.1;Parent=gene-LU604_RS06625;Dbxref=Genbank:WP_016190134.1;Name=WP_016190134.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441232.1;locus_tag=LU604_RS06625;product=PTS glucose transporter subunit IIA;protein_id=WP_016190134.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1275588 1277315 . - . ID=gene-LU604_RS06630;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=LU604_RS06630;old_locus_tag=LU604_06630 NZ_CP089942.1 Protein Homology CDS 1275588 1277315 . - 0 ID=cds-WP_233480214.1;Parent=gene-LU604_RS06630;Dbxref=Genbank:WP_233480214.1;Name=WP_233480214.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=LU604_RS06630;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_233480214.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1277533 1277790 . - . ID=gene-LU604_RS06635;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=LU604_RS06635;old_locus_tag=LU604_06635 NZ_CP089942.1 Protein Homology CDS 1277533 1277790 . - 0 ID=cds-WP_016190132.1;Parent=gene-LU604_RS06635;Dbxref=Genbank:WP_016190132.1;Name=WP_016190132.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=LU604_RS06635;product=phosphocarrier protein Hpr;protein_id=WP_016190132.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1278182 1279153 . - . ID=gene-LU604_RS06640;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=LU604_RS06640;old_locus_tag=LU604_06640 NZ_CP089942.1 Protein Homology CDS 1278182 1279153 . - 0 ID=cds-WP_016190131.1;Parent=gene-LU604_RS06640;Dbxref=Genbank:WP_016190131.1;Name=WP_016190131.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=LU604_RS06640;product=cysteine synthase A;protein_id=WP_016190131.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1279282 1280043 . - . ID=gene-LU604_RS06645;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=LU604_RS06645;old_locus_tag=LU604_06645 NZ_CP089942.1 Protein Homology CDS 1279282 1280043 . - 0 ID=cds-WP_016190130.1;Parent=gene-LU604_RS06645;Dbxref=Genbank:WP_016190130.1;Name=WP_016190130.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117797.1;locus_tag=LU604_RS06645;product=sulfate transporter CysZ;protein_id=WP_016190130.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1280260 1281180 . + . ID=gene-LU604_RS06650;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=LU604_RS06650;old_locus_tag=LU604_06650 NZ_CP089942.1 Protein Homology CDS 1280260 1281180 . + 0 ID=cds-WP_016190129.1;Parent=gene-LU604_RS06650;Dbxref=Genbank:WP_016190129.1;Name=WP_016190129.1;Ontology_term=GO:0000917,GO:0005515;gbkey=CDS;gene=zipA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358655.1;locus_tag=LU604_RS06650;product=cell division protein ZipA;protein_id=WP_016190129.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1281258 1283276 . + . ID=gene-LU604_RS06655;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=LU604_RS06655;old_locus_tag=LU604_06655 NZ_CP089942.1 Protein Homology CDS 1281258 1283276 . + 0 ID=cds-WP_233480215.1;Parent=gene-LU604_RS06655;Dbxref=Genbank:WP_233480215.1;Name=WP_233480215.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544807.1;locus_tag=LU604_RS06655;product=NAD-dependent DNA ligase LigA;protein_id=WP_233480215.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1283278 1283498 . + . ID=gene-LU604_RS06660;Name=LU604_RS06660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06660;old_locus_tag=LU604_06660;pseudo=true NZ_CP089942.1 Protein Homology CDS 1283278 1283498 . + 0 ID=cds-LU604_RS06660;Parent=gene-LU604_RS06660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013026636.1;locus_tag=LU604_RS06660;product=DUF3820 family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1283635 1284675 . + . ID=gene-LU604_RS06665;Name=LU604_RS06665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06665;old_locus_tag=LU604_06665;pseudo=true NZ_CP089942.1 Protein Homology CDS 1283635 1284675 . + 0 ID=cds-LU604_RS06665;Parent=gene-LU604_RS06665;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS06665;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1284808 1285803 . - . ID=gene-LU604_RS06670;Name=LU604_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06670;old_locus_tag=LU604_06670 NZ_CP089942.1 Protein Homology CDS 1284808 1285803 . - 0 ID=cds-WP_233480216.1;Parent=gene-LU604_RS06670;Dbxref=Genbank:WP_233480216.1;Name=WP_233480216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190124.1;locus_tag=LU604_RS06670;product=bile acid:sodium symporter;protein_id=WP_233480216.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1286003 1287137 . + . ID=gene-LU604_RS06675;Name=LU604_RS06675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06675;old_locus_tag=LU604_06675;partial=true;pseudo=true;start_range=.,1286003 NZ_CP089942.1 Protein Homology CDS 1286003 1287137 . + 0 ID=cds-LU604_RS06675;Parent=gene-LU604_RS06675;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU604_RS06675;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,1286003;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1287203 1287615 . - . ID=gene-LU604_RS06680;Name=LU604_RS06680;end_range=1287615,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06680;old_locus_tag=LU604_06680;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1287203 1287615 . - 0 ID=cds-LU604_RS06680;Parent=gene-LU604_RS06680;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1287615,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011073373.1;locus_tag=LU604_RS06680;partial=true;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1287786 1288475 . - . ID=gene-LU604_RS06685;Name=LU604_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06685;old_locus_tag=LU604_06685 NZ_CP089942.1 Protein Homology CDS 1287786 1288475 . - 0 ID=cds-WP_040465312.1;Parent=gene-LU604_RS06685;Dbxref=Genbank:WP_040465312.1;Name=WP_040465312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017798997.1;locus_tag=LU604_RS06685;product=GntR family transcriptional regulator;protein_id=WP_040465312.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1288722 1288856 . - . ID=gene-LU604_RS26925;Name=LU604_RS26925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26925 NZ_CP089942.1 GeneMarkS-2+ CDS 1288722 1288856 . - 0 ID=cds-WP_256371762.1;Parent=gene-LU604_RS26925;Dbxref=Genbank:WP_256371762.1;Name=WP_256371762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26925;product=hypothetical protein;protein_id=WP_256371762.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1289031 1289909 . - . ID=gene-LU604_RS06690;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=LU604_RS06690;old_locus_tag=LU604_06690 NZ_CP089942.1 Protein Homology CDS 1289031 1289909 . - 0 ID=cds-WP_233480217.1;Parent=gene-LU604_RS06690;Dbxref=Genbank:WP_233480217.1;Name=WP_233480217.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544814.1;locus_tag=LU604_RS06690;product=cysteine synthase CysM;protein_id=WP_233480217.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1290219 1291307 . - . ID=gene-LU604_RS06695;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=LU604_RS06695;old_locus_tag=LU604_06695 NZ_CP089942.1 Protein Homology CDS 1290219 1291307 . - 0 ID=cds-WP_233480218.1;Parent=gene-LU604_RS06695;Dbxref=Genbank:WP_233480218.1;Name=WP_233480218.1;Ontology_term=GO:0008272,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081738.1;locus_tag=LU604_RS06695;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_233480218.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1291322 1292170 . - . ID=gene-LU604_RS06700;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=LU604_RS06700;old_locus_tag=LU604_06700 NZ_CP089942.1 Protein Homology CDS 1291322 1292170 . - 0 ID=cds-WP_016190116.1;Parent=gene-LU604_RS06700;Dbxref=Genbank:WP_016190116.1;Name=WP_016190116.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803275.1;locus_tag=LU604_RS06700;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_016190116.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1292170 1293003 . - . ID=gene-LU604_RS06705;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=LU604_RS06705;old_locus_tag=LU604_06705 NZ_CP089942.1 Protein Homology CDS 1292170 1293003 . - 0 ID=cds-WP_233480219.1;Parent=gene-LU604_RS06705;Dbxref=Genbank:WP_233480219.1;Name=WP_233480219.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190115.1;locus_tag=LU604_RS06705;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_233480219.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1293003 1294019 . - . ID=gene-LU604_RS06710;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=LU604_RS06710;old_locus_tag=LU604_06710 NZ_CP089942.1 Protein Homology CDS 1293003 1294019 . - 0 ID=cds-WP_016190114.1;Parent=gene-LU604_RS06710;Dbxref=Genbank:WP_016190114.1;Name=WP_016190114.1;Ontology_term=GO:0008272,GO:0015419;gbkey=CDS;gene=cysP;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158931.1;locus_tag=LU604_RS06710;product=thiosulfate ABC transporter substrate-binding protein CysP;protein_id=WP_016190114.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1294219 1294836 . - . ID=gene-LU604_RS06715;Name=LU604_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06715;old_locus_tag=LU604_06715 NZ_CP089942.1 Protein Homology CDS 1294219 1294836 . - 0 ID=cds-WP_233480220.1;Parent=gene-LU604_RS06715;Dbxref=Genbank:WP_233480220.1;Name=WP_233480220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170467.1;locus_tag=LU604_RS06715;product=RpoE-regulated lipoprotein;protein_id=WP_233480220.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1294902 1295349 . - . ID=gene-LU604_RS06720;Name=LU604_RS06720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06720;old_locus_tag=LU604_06720;pseudo=true NZ_CP089942.1 Protein Homology CDS 1294902 1295349 . - 0 ID=cds-LU604_RS06720;Parent=gene-LU604_RS06720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848836.1;locus_tag=LU604_RS06720;product=DUF2919 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1295412 1295837 . - . ID=gene-LU604_RS06725;Name=LU604_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06725;old_locus_tag=LU604_06725 NZ_CP089942.1 Protein Homology CDS 1295412 1295837 . - 0 ID=cds-WP_016190111.1;Parent=gene-LU604_RS06725;Dbxref=Genbank:WP_016190111.1;Name=WP_016190111.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392525.1;locus_tag=LU604_RS06725;product=GNAT family acetyltransferase;protein_id=WP_016190111.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1296053 1296890 . + . ID=gene-LU604_RS06730;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=pseudogene;locus_tag=LU604_RS06730;old_locus_tag=LU604_06730;pseudo=true NZ_CP089942.1 Protein Homology CDS 1296053 1296890 . + 0 ID=cds-LU604_RS06730;Parent=gene-LU604_RS06730;Note=frameshifted;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814019.1;locus_tag=LU604_RS06730;product=N-acetylmuramoyl-L-alanine amidase AmiA;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1296940 1297848 . + . ID=gene-LU604_RS06735;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=LU604_RS06735;old_locus_tag=LU604_06735 NZ_CP089942.1 Protein Homology CDS 1296940 1297848 . + 0 ID=cds-WP_016190109.1;Parent=gene-LU604_RS06735;Dbxref=Genbank:WP_016190109.1;Name=WP_016190109.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158943.1;locus_tag=LU604_RS06735;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_016190109.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1298311 1299261 . + . ID=gene-LU604_RS06740;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=LU604_RS06740;old_locus_tag=LU604_06740 NZ_CP089942.1 Protein Homology CDS 1298311 1299261 . + 0 ID=cds-WP_233481536.1;Parent=gene-LU604_RS06740;Dbxref=Genbank:WP_233481536.1;Name=WP_233481536.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358671.1;locus_tag=LU604_RS06740;product=transaldolase;protein_id=WP_233481536.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1299322 1301322 . + . ID=gene-LU604_RS06745;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=LU604_RS06745;old_locus_tag=LU604_06745 NZ_CP089942.1 Protein Homology CDS 1299322 1301322 . + 0 ID=cds-WP_233480222.1;Parent=gene-LU604_RS06745;Dbxref=Genbank:WP_233480222.1;Name=WP_233480222.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190107.1;locus_tag=LU604_RS06745;product=transketolase;protein_id=WP_233480222.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1301570 1302658 . - . ID=gene-LU604_RS06750;Name=LU604_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06750;old_locus_tag=LU604_06750 NZ_CP089942.1 Protein Homology CDS 1301570 1302658 . - 0 ID=cds-WP_233481537.1;Parent=gene-LU604_RS06750;Dbxref=Genbank:WP_233481537.1;Name=WP_233481537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007890870.1;locus_tag=LU604_RS06750;product=DUF1176 domain-containing protein;protein_id=WP_233481537.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1303751 1304442 . + . ID=gene-LU604_RS06755;Name=LU604_RS06755;end_range=1304442,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06755;old_locus_tag=LU604_06755;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1303751 1304442 . + 0 ID=cds-LU604_RS06755;Parent=gene-LU604_RS06755;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1304442,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS06755;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1304566 1304760 . + . ID=gene-LU604_RS06760;Name=LU604_RS06760;end_range=1304760,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06760;old_locus_tag=LU604_06760;partial=true;pseudo=true;start_range=.,1304566 NZ_CP089942.1 Protein Homology CDS 1304566 1304760 . + 0 ID=cds-LU604_RS06760;Parent=gene-LU604_RS06760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1304760,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539895.1;locus_tag=LU604_RS06760;partial=true;product=transposase;pseudo=true;start_range=.,1304566;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1304806 1304913 . + . ID=gene-LU604_RS06765;Name=LU604_RS06765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06765;old_locus_tag=LU604_06765;partial=true;pseudo=true;start_range=.,1304806 NZ_CP089942.1 Protein Homology CDS 1304806 1304913 . + 0 ID=cds-LU604_RS06765;Parent=gene-LU604_RS06765;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203254.1;locus_tag=LU604_RS06765;partial=true;product=SMP-30/gluconolactonase/LRE family protein;pseudo=true;start_range=.,1304806;transl_table=11 NZ_CP089942.1 RefSeq gene 1304953 1306203 . - . ID=gene-LU604_RS06770;Name=LU604_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06770;old_locus_tag=LU604_06770 NZ_CP089942.1 Protein Homology CDS 1304953 1306203 . - 0 ID=cds-WP_233480224.1;Parent=gene-LU604_RS06770;Dbxref=Genbank:WP_233480224.1;Name=WP_233480224.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190101.1;locus_tag=LU604_RS06770;product=mechanosensitive ion channel;protein_id=WP_233480224.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1306323 1306469 . - . ID=gene-LU604_RS06775;Name=LU604_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06775;old_locus_tag=LU604_06775 NZ_CP089942.1 GeneMarkS-2+ CDS 1306323 1306469 . - 0 ID=cds-WP_157275214.1;Parent=gene-LU604_RS06775;Dbxref=Genbank:WP_157275214.1;Name=WP_157275214.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS06775;product=hypothetical protein;protein_id=WP_157275214.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1306559 1306768 . - . ID=gene-LU604_RS06780;Name=LU604_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06780;old_locus_tag=LU604_06780 NZ_CP089942.1 Protein Homology CDS 1306559 1306768 . - 0 ID=cds-WP_233480225.1;Parent=gene-LU604_RS06780;Dbxref=Genbank:WP_233480225.1;Name=WP_233480225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158774.1;locus_tag=LU604_RS06780;product=hypothetical protein;protein_id=WP_233480225.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1306877 1307197 . - . ID=gene-LU604_RS06785;Name=LU604_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06785;old_locus_tag=LU604_06785 NZ_CP089942.1 Protein Homology CDS 1306877 1307197 . - 0 ID=cds-WP_233480226.1;Parent=gene-LU604_RS06785;Dbxref=Genbank:WP_233480226.1;Name=WP_233480226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203248.1;locus_tag=LU604_RS06785;product=hypothetical protein;protein_id=WP_233480226.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1307324 1307566 . + . ID=gene-LU604_RS06790;Name=LU604_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06790;old_locus_tag=LU604_06790 NZ_CP089942.1 Protein Homology CDS 1307324 1307566 . + 0 ID=cds-WP_016190098.1;Parent=gene-LU604_RS06790;Dbxref=Genbank:WP_016190098.1;Name=WP_016190098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010259039.1;locus_tag=LU604_RS06790;product=DUF333 domain-containing protein;protein_id=WP_016190098.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1307937 1308977 . + . ID=gene-LU604_RS06795;Name=LU604_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06795;old_locus_tag=LU604_06795 NZ_CP089942.1 Protein Homology CDS 1307937 1308977 . + 0 ID=cds-WP_233478553.1-10;Parent=gene-LU604_RS06795;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS06795;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1309318 1310315 . - . ID=gene-LU604_RS06800;Name=LU604_RS06800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06800;old_locus_tag=LU604_06800;pseudo=true NZ_CP089942.1 Protein Homology CDS 1309318 1310315 . - 0 ID=cds-LU604_RS06800;Parent=gene-LU604_RS06800;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492245.1;locus_tag=LU604_RS06800;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1310700 1310963 . + . ID=gene-LU604_RS06805;Name=LU604_RS06805;end_range=1310963,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06805;old_locus_tag=LU604_06805;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1310700 1310963 . + 0 ID=cds-LU604_RS06805;Parent=gene-LU604_RS06805;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1310963,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011787828.1;locus_tag=LU604_RS06805;partial=true;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1311156 1312160 . - . ID=gene-LU604_RS06810;Name=LU604_RS06810;end_range=1312160,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06810;old_locus_tag=LU604_06810;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1311156 1312160 . - 0 ID=cds-LU604_RS06810;Parent=gene-LU604_RS06810;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=1312160,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU604_RS06810;partial=true;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1312224 1312379 . - . ID=gene-LU604_RS06815;Name=LU604_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06815;old_locus_tag=LU604_06815 NZ_CP089942.1 GeneMarkS-2+ CDS 1312224 1312379 . - 0 ID=cds-WP_233478597.1-2;Parent=gene-LU604_RS06815;Dbxref=Genbank:WP_233478597.1;Name=WP_233478597.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS06815;product=hypothetical protein;protein_id=WP_233478597.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1312462 1313077 . + . ID=gene-LU604_RS06820;Name=LU604_RS06820;end_range=1313077,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06820;old_locus_tag=LU604_06820;partial=true;pseudo=true;start_range=.,1312462 NZ_CP089942.1 Protein Homology CDS 1312462 1313077 . + 0 ID=cds-LU604_RS06820;Parent=gene-LU604_RS06820;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=1313077,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=LU604_RS06820;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,1312462;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1313133 1314178 . - . ID=gene-LU604_RS06825;Name=LU604_RS06825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06825;old_locus_tag=LU604_06825;pseudo=true NZ_CP089942.1 Protein Homology CDS 1313133 1314178 . - 0 ID=cds-LU604_RS06825;Parent=gene-LU604_RS06825;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS06825;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1314373 1315332 . - . ID=gene-LU604_RS06830;Name=LU604_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06830;old_locus_tag=LU604_06830 NZ_CP089942.1 Protein Homology CDS 1314373 1315332 . - 0 ID=cds-WP_233481538.1;Parent=gene-LU604_RS06830;Dbxref=Genbank:WP_233481538.1;Name=WP_233481538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190090.1;locus_tag=LU604_RS06830;product=DUF616 domain-containing protein;protein_id=WP_233481538.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1315633 1316678 . + . ID=gene-LU604_RS06835;Name=LU604_RS06835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06835;old_locus_tag=LU604_06835;pseudo=true NZ_CP089942.1 Protein Homology CDS 1315633 1316678 . + 0 ID=cds-LU604_RS06835;Parent=gene-LU604_RS06835;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS06835;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1316860 1317558 . + . ID=gene-LU604_RS06840;Name=LU604_RS06840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06840;old_locus_tag=LU604_06840;pseudo=true NZ_CP089942.1 Protein Homology CDS 1316860 1317558 . + 0 ID=cds-LU604_RS06840;Parent=gene-LU604_RS06840;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=LU604_RS06840;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1317631 1317783 . + . ID=gene-LU604_RS06845;Name=LU604_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06845;old_locus_tag=LU604_06845 NZ_CP089942.1 GeneMarkS-2+ CDS 1317631 1317783 . + 0 ID=cds-WP_233481539.1;Parent=gene-LU604_RS06845;Dbxref=Genbank:WP_233481539.1;Name=WP_233481539.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS06845;product=hypothetical protein;protein_id=WP_233481539.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1318381 1318839 . - . ID=gene-LU604_RS06850;Name=LU604_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06850;old_locus_tag=LU604_06850 NZ_CP089942.1 GeneMarkS-2+ CDS 1318381 1318839 . - 0 ID=cds-WP_016190087.1;Parent=gene-LU604_RS06850;Dbxref=Genbank:WP_016190087.1;Name=WP_016190087.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS06850;product=hypothetical protein;protein_id=WP_016190087.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1318888 1319370 . - . ID=gene-LU604_RS06855;Name=LU604_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06855;old_locus_tag=LU604_06855 NZ_CP089942.1 Protein Homology CDS 1318888 1319370 . - 0 ID=cds-WP_233480228.1;Parent=gene-LU604_RS06855;Dbxref=Genbank:WP_233480228.1;Name=WP_233480228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369713.1;locus_tag=LU604_RS06855;product=type VI secretion system tube protein Hcp;protein_id=WP_233480228.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1319717 1320244 . + . ID=gene-LU604_RS06860;Name=LU604_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06860;old_locus_tag=LU604_06860 NZ_CP089942.1 Protein Homology CDS 1319717 1320244 . + 0 ID=cds-WP_233480229.1;Parent=gene-LU604_RS06860;Dbxref=Genbank:WP_233480229.1;Name=WP_233480229.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025354.2;locus_tag=LU604_RS06860;product=DUF4225 domain-containing protein;protein_id=WP_233480229.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1320232 1320558 . - . ID=gene-LU604_RS06865;Name=LU604_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06865;old_locus_tag=LU604_06865 NZ_CP089942.1 GeneMarkS-2+ CDS 1320232 1320558 . - 0 ID=cds-WP_233480230.1;Parent=gene-LU604_RS06865;Dbxref=Genbank:WP_233480230.1;Name=WP_233480230.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS06865;product=hypothetical protein;protein_id=WP_233480230.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1320977 1322097 . + . ID=gene-LU604_RS06870;Name=LU604_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06870;old_locus_tag=LU604_06870 NZ_CP089942.1 Protein Homology CDS 1320977 1321235 . + 0 ID=cds-WP_233480231.1;Parent=gene-LU604_RS06870;Dbxref=Genbank:WP_233480231.1;Name=WP_233480231.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS06870;product=IS3 family transposase;protein_id=WP_233480231.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 1321235 1322097 . + 2 ID=cds-WP_233480231.1;Parent=gene-LU604_RS06870;Dbxref=Genbank:WP_233480231.1;Name=WP_233480231.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS06870;product=IS3 family transposase;protein_id=WP_233480231.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1322128 1322793 . - . ID=gene-LU604_RS06875;Name=LU604_RS06875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06875;old_locus_tag=LU604_06875;partial=true;pseudo=true;start_range=.,1322128 NZ_CP089942.1 Protein Homology CDS 1322128 1322793 . - 0 ID=cds-LU604_RS06875;Parent=gene-LU604_RS06875;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001703998.1;locus_tag=LU604_RS06875;partial=true;product=integrase arm-type DNA-binding domain-containing protein;pseudo=true;start_range=.,1322128;transl_table=11 NZ_CP089942.1 RefSeq gene 1323669 1323917 . - . ID=gene-LU604_RS06880;Name=LU604_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06880;old_locus_tag=LU604_06880 NZ_CP089942.1 GeneMarkS-2+ CDS 1323669 1323917 . - 0 ID=cds-WP_040465308.1;Parent=gene-LU604_RS06880;Dbxref=Genbank:WP_040465308.1;Name=WP_040465308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS06880;product=hypothetical protein;protein_id=WP_040465308.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1323977 1324411 . + . ID=gene-LU604_RS06885;Name=LU604_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06885;old_locus_tag=LU604_06885 NZ_CP089942.1 GeneMarkS-2+ CDS 1323977 1324411 . + 0 ID=cds-WP_233481540.1;Parent=gene-LU604_RS06885;Dbxref=Genbank:WP_233481540.1;Name=WP_233481540.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS06885;product=hypothetical protein;protein_id=WP_233481540.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1324923 1325627 . - . ID=gene-LU604_RS06890;Name=LU604_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06890;old_locus_tag=LU604_06890 NZ_CP089942.1 Protein Homology CDS 1324923 1325627 . - 0 ID=cds-WP_233480233.1;Parent=gene-LU604_RS06890;Dbxref=Genbank:WP_233480233.1;Name=WP_233480233.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU604_RS06890;product=IS6 family transposase;protein_id=WP_233480233.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1325639 1325914 . - . ID=gene-LU604_RS06895;Name=LU604_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06895;old_locus_tag=LU604_06895 NZ_CP089942.1 GeneMarkS-2+ CDS 1325639 1325914 . - 0 ID=cds-WP_233480234.1;Parent=gene-LU604_RS06895;Dbxref=Genbank:WP_233480234.1;Name=WP_233480234.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS06895;product=hypothetical protein;protein_id=WP_233480234.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1326244 1326711 . - . ID=gene-LU604_RS06900;Name=LU604_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06900;old_locus_tag=LU604_06900 NZ_CP089942.1 Protein Homology CDS 1326244 1326711 . - 0 ID=cds-WP_016190078.1;Parent=gene-LU604_RS06900;Dbxref=Genbank:WP_016190078.1;Name=WP_016190078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190066.1;locus_tag=LU604_RS06900;product=DUF943 family protein;protein_id=WP_016190078.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1326708 1327547 . - . ID=gene-LU604_RS06905;Name=LU604_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06905;old_locus_tag=LU604_06905 NZ_CP089942.1 Protein Homology CDS 1326708 1327547 . - 0 ID=cds-WP_233480235.1;Parent=gene-LU604_RS06905;Dbxref=Genbank:WP_233480235.1;Name=WP_233480235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190077.1;locus_tag=LU604_RS06905;product=DUF3289 family protein;protein_id=WP_233480235.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1328101 1328394 . + . ID=gene-LU604_RS06910;Name=LU604_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06910;old_locus_tag=LU604_06910 NZ_CP089942.1 Protein Homology CDS 1328101 1328394 . + 0 ID=cds-WP_016190076.1;Parent=gene-LU604_RS06910;Dbxref=Genbank:WP_016190076.1;Name=WP_016190076.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: protein motif:HMM:NF018262.2;locus_tag=LU604_RS06910;product=antiterminator Q family protein;protein_id=WP_016190076.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1328387 1328623 . + . ID=gene-LU604_RS06915;Name=LU604_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06915;old_locus_tag=LU604_06915 NZ_CP089942.1 GeneMarkS-2+ CDS 1328387 1328623 . + 0 ID=cds-WP_233480236.1;Parent=gene-LU604_RS06915;Dbxref=Genbank:WP_233480236.1;Name=WP_233480236.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS06915;product=hypothetical protein;protein_id=WP_233480236.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1328745 1329179 . + . ID=gene-LU604_RS06920;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS06920;old_locus_tag=LU604_06920;pseudo=true NZ_CP089942.1 Protein Homology CDS 1328745 1329179 . + 0 ID=cds-LU604_RS06920;Parent=gene-LU604_RS06920;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000525033.1;locus_tag=LU604_RS06920;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1329533 1330831 . - . ID=gene-LU604_RS06925;Name=LU604_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06925;old_locus_tag=LU604_06925 NZ_CP089942.1 Protein Homology CDS 1329533 1330831 . - 0 ID=cds-WP_233480237.1;Parent=gene-LU604_RS06925;Dbxref=Genbank:WP_233480237.1;Name=WP_233480237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000772685.1;locus_tag=LU604_RS06925;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_233480237.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1331025 1331138 . - . ID=gene-LU604_RS06930;Name=LU604_RS06930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS06930;old_locus_tag=LU604_06930;partial=true;pseudo=true;start_range=.,1331025 NZ_CP089942.1 Protein Homology CDS 1331025 1331138 . - 0 ID=cds-LU604_RS06930;Parent=gene-LU604_RS06930;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203237.1;locus_tag=LU604_RS06930;partial=true;product=excisionase;pseudo=true;start_range=.,1331025;transl_table=11 NZ_CP089942.1 RefSeq gene 1331183 1331656 . - . ID=gene-LU604_RS06935;Name=LU604_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06935;old_locus_tag=LU604_06935 NZ_CP089942.1 Protein Homology CDS 1331183 1331656 . - 0 ID=cds-WP_233480238.1;Parent=gene-LU604_RS06935;Dbxref=Genbank:WP_233480238.1;Name=WP_233480238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014526511.1;locus_tag=LU604_RS06935;product=class I SAM-dependent methyltransferase;protein_id=WP_233480238.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1331653 1331877 . - . ID=gene-LU604_RS06940;Name=LU604_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06940;old_locus_tag=LU604_06940 NZ_CP089942.1 Protein Homology CDS 1331653 1331877 . - 0 ID=cds-WP_233480239.1;Parent=gene-LU604_RS06940;Dbxref=Genbank:WP_233480239.1;Name=WP_233480239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606403.1;locus_tag=LU604_RS06940;product=hypothetical protein;protein_id=WP_233480239.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1331878 1332087 . - . ID=gene-LU604_RS06945;Name=LU604_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06945;old_locus_tag=LU604_06945 NZ_CP089942.1 Protein Homology CDS 1331878 1332087 . - 0 ID=cds-WP_233480240.1;Parent=gene-LU604_RS06945;Dbxref=Genbank:WP_233480240.1;Name=WP_233480240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191225.1;locus_tag=LU604_RS06945;product=hypothetical protein;protein_id=WP_233480240.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1332188 1332622 . - . ID=gene-LU604_RS06950;Name=LU604_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06950;old_locus_tag=LU604_06950 NZ_CP089942.1 Protein Homology CDS 1332188 1332622 . - 0 ID=cds-WP_233480241.1;Parent=gene-LU604_RS06950;Dbxref=Genbank:WP_233480241.1;Name=WP_233480241.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016343.2;locus_tag=LU604_RS06950;product=DUF551 domain-containing protein;protein_id=WP_233480241.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1332619 1333095 . - . ID=gene-LU604_RS06955;Name=LU604_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06955;old_locus_tag=LU604_06955 NZ_CP089942.1 Protein Homology CDS 1332619 1333095 . - 0 ID=cds-WP_233480242.1;Parent=gene-LU604_RS06955;Dbxref=Genbank:WP_233480242.1;Name=WP_233480242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681704.1;locus_tag=LU604_RS06955;product=hypothetical protein;protein_id=WP_233480242.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1333092 1333814 . - . ID=gene-LU604_RS06960;Name=LU604_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06960;old_locus_tag=LU604_06960 NZ_CP089942.1 GeneMarkS-2+ CDS 1333092 1333814 . - 0 ID=cds-WP_233480243.1;Parent=gene-LU604_RS06960;Dbxref=Genbank:WP_233480243.1;Name=WP_233480243.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS06960;product=hypothetical protein;protein_id=WP_233480243.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1333811 1334290 . - . ID=gene-LU604_RS06965;Name=LU604_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06965;old_locus_tag=LU604_06965 NZ_CP089942.1 Protein Homology CDS 1333811 1334290 . - 0 ID=cds-WP_233480244.1;Parent=gene-LU604_RS06965;Dbxref=Genbank:WP_233480244.1;Name=WP_233480244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001006818.1;locus_tag=LU604_RS06965;product=class I SAM-dependent methyltransferase;protein_id=WP_233480244.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1334287 1334511 . - . ID=gene-LU604_RS06970;Name=LU604_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06970;old_locus_tag=LU604_06970 NZ_CP089942.1 Protein Homology CDS 1334287 1334511 . - 0 ID=cds-WP_046372144.1;Parent=gene-LU604_RS06970;Dbxref=Genbank:WP_046372144.1;Name=WP_046372144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236813.1;locus_tag=LU604_RS06970;product=hypothetical protein;protein_id=WP_046372144.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1334504 1335079 . - . ID=gene-LU604_RS06975;Name=LU604_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06975;old_locus_tag=LU604_06975 NZ_CP089942.1 GeneMarkS-2+ CDS 1334504 1335079 . - 0 ID=cds-WP_233480245.1;Parent=gene-LU604_RS06975;Dbxref=Genbank:WP_233480245.1;Name=WP_233480245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS06975;product=hypothetical protein;protein_id=WP_233480245.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1335076 1335657 . - . ID=gene-LU604_RS06980;Name=LU604_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06980;old_locus_tag=LU604_06980 NZ_CP089942.1 Protein Homology CDS 1335076 1335657 . - 0 ID=cds-WP_233480246.1;Parent=gene-LU604_RS06980;Dbxref=Genbank:WP_233480246.1;Name=WP_233480246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016530552.1;locus_tag=LU604_RS06980;product=hypothetical protein;protein_id=WP_233480246.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1335667 1335936 . - . ID=gene-LU604_RS06985;Name=LU604_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06985;old_locus_tag=LU604_06985 NZ_CP089942.1 GeneMarkS-2+ CDS 1335667 1335936 . - 0 ID=cds-WP_233481541.1;Parent=gene-LU604_RS06985;Dbxref=Genbank:WP_233481541.1;Name=WP_233481541.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS06985;product=hypothetical protein;protein_id=WP_233481541.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1335957 1336592 . - . ID=gene-LU604_RS06990;Name=LU604_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06990;old_locus_tag=LU604_06990 NZ_CP089942.1 Protein Homology CDS 1335957 1336592 . - 0 ID=cds-WP_016191219.1;Parent=gene-LU604_RS06990;Dbxref=Genbank:WP_016191219.1;Name=WP_016191219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000031374.1;locus_tag=LU604_RS06990;product=ERF family protein;protein_id=WP_016191219.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1336905 1337036 . - . ID=gene-LU604_RS06995;Name=LU604_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS06995;old_locus_tag=LU604_06995 NZ_CP089942.1 Protein Homology CDS 1336905 1337036 . - 0 ID=cds-WP_016191218.1;Parent=gene-LU604_RS06995;Dbxref=Genbank:WP_016191218.1;Name=WP_016191218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017346155.1;locus_tag=LU604_RS06995;product=protease FtsH-inhibitory lysogeny factor CIII;protein_id=WP_016191218.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1337048 1337539 . - . ID=gene-LU604_RS07000;Name=LU604_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07000;old_locus_tag=LU604_07000 NZ_CP089942.1 Protein Homology CDS 1337048 1337539 . - 0 ID=cds-WP_233480247.1;Parent=gene-LU604_RS07000;Dbxref=Genbank:WP_233480247.1;Name=WP_233480247.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013043.2;locus_tag=LU604_RS07000;product=HNH endonuclease;protein_id=WP_233480247.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1337618 1337911 . - . ID=gene-LU604_RS07005;Name=LU604_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07005;old_locus_tag=LU604_07005 NZ_CP089942.1 GeneMarkS-2+ CDS 1337618 1337911 . - 0 ID=cds-WP_233481542.1;Parent=gene-LU604_RS07005;Dbxref=Genbank:WP_233481542.1;Name=WP_233481542.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07005;product=hypothetical protein;protein_id=WP_233481542.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1337859 1338212 . - . ID=gene-LU604_RS07010;Name=LU604_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07010;old_locus_tag=LU604_07010 NZ_CP089942.1 GeneMarkS-2+ CDS 1337859 1338212 . - 0 ID=cds-WP_233480249.1;Parent=gene-LU604_RS07010;Dbxref=Genbank:WP_233480249.1;Name=WP_233480249.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07010;product=hypothetical protein;protein_id=WP_233480249.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1338399 1338890 . - . ID=gene-LU604_RS07015;Name=LU604_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07015;old_locus_tag=LU604_07015 NZ_CP089942.1 GeneMarkS-2+ CDS 1338399 1338890 . - 0 ID=cds-WP_233480250.1;Parent=gene-LU604_RS07015;Dbxref=Genbank:WP_233480250.1;Name=WP_233480250.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07015;product=hypothetical protein;protein_id=WP_233480250.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1338895 1339146 . - . ID=gene-LU604_RS07020;Name=LU604_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07020;old_locus_tag=LU604_07020 NZ_CP089942.1 GeneMarkS-2+ CDS 1338895 1339146 . - 0 ID=cds-WP_233480251.1;Parent=gene-LU604_RS07020;Dbxref=Genbank:WP_233480251.1;Name=WP_233480251.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07020;product=hypothetical protein;protein_id=WP_233480251.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1339570 1340199 . - . ID=gene-LU604_RS07025;Name=LU604_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07025;old_locus_tag=LU604_07025 NZ_CP089942.1 Protein Homology CDS 1339570 1340199 . - 0 ID=cds-WP_233480252.1;Parent=gene-LU604_RS07025;Dbxref=Genbank:WP_233480252.1;Name=WP_233480252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704102.1;locus_tag=LU604_RS07025;product=LexA family transcriptional regulator;protein_id=WP_233480252.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1340299 1340514 . + . ID=gene-LU604_RS07030;Name=LU604_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07030;old_locus_tag=LU604_07030 NZ_CP089942.1 Protein Homology CDS 1340299 1340514 . + 0 ID=cds-WP_233480253.1;Parent=gene-LU604_RS07030;Dbxref=Genbank:WP_233480253.1;Name=WP_233480253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001194218.1;locus_tag=LU604_RS07030;product=helix-turn-helix transcriptional regulator;protein_id=WP_233480253.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1340621 1340926 . + . ID=gene-LU604_RS07035;Name=LU604_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07035;old_locus_tag=LU604_07035 NZ_CP089942.1 Protein Homology CDS 1340621 1340926 . + 0 ID=cds-WP_233480254.1;Parent=gene-LU604_RS07035;Dbxref=Genbank:WP_233480254.1;Name=WP_233480254.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191209.1;locus_tag=LU604_RS07035;product=CII family transcriptional regulator;protein_id=WP_233480254.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1340945 1341643 . + . ID=gene-LU604_RS07040;Name=LU604_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07040;old_locus_tag=LU604_07040 NZ_CP089942.1 Protein Homology CDS 1340945 1341643 . + 0 ID=cds-WP_233480255.1;Parent=gene-LU604_RS07040;Dbxref=Genbank:WP_233480255.1;Name=WP_233480255.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191208.1;locus_tag=LU604_RS07040;product=phage antirepressor KilAC domain-containing protein;protein_id=WP_233480255.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1341640 1342341 . + . ID=gene-LU604_RS07045;Name=LU604_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07045;old_locus_tag=LU604_07045 NZ_CP089942.1 Protein Homology CDS 1341640 1342341 . + 0 ID=cds-WP_233481314.1;Parent=gene-LU604_RS07045;Dbxref=Genbank:WP_233481314.1;Name=WP_233481314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000061490.1;locus_tag=LU604_RS07045;product=helix-turn-helix domain-containing protein;protein_id=WP_233481314.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1342338 1343099 . + . ID=gene-LU604_RS07050;Name=LU604_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07050;old_locus_tag=LU604_07050 NZ_CP089942.1 Protein Homology CDS 1342338 1343099 . + 0 ID=cds-WP_233480257.1;Parent=gene-LU604_RS07050;Dbxref=Genbank:WP_233480257.1;Name=WP_233480257.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837634.1;locus_tag=LU604_RS07050;product=replication protein P;protein_id=WP_233480257.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1343551 1344204 . + . ID=gene-LU604_RS07055;Name=LU604_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07055;old_locus_tag=LU604_07055 NZ_CP089942.1 Protein Homology CDS 1343551 1344204 . + 0 ID=cds-WP_233481543.1;Parent=gene-LU604_RS07055;Dbxref=Genbank:WP_233481543.1;Name=WP_233481543.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014548.2;locus_tag=LU604_RS07055;product=BRO family protein;protein_id=WP_233481543.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1344254 1344691 . + . ID=gene-LU604_RS07060;Name=LU604_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07060;old_locus_tag=LU604_07060 NZ_CP089942.1 Protein Homology CDS 1344254 1344691 . + 0 ID=cds-WP_233480259.1;Parent=gene-LU604_RS07060;Dbxref=Genbank:WP_233480259.1;Name=WP_233480259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011410606.1;locus_tag=LU604_RS07060;product=recombination protein NinB;protein_id=WP_233480259.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1344688 1345077 . + . ID=gene-LU604_RS07065;Name=LU604_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07065;old_locus_tag=LU604_07065 NZ_CP089942.1 GeneMarkS-2+ CDS 1344688 1345077 . + 0 ID=cds-WP_233480260.1;Parent=gene-LU604_RS07065;Dbxref=Genbank:WP_233480260.1;Name=WP_233480260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07065;product=hypothetical protein;protein_id=WP_233480260.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1345052 1345252 . + . ID=gene-LU604_RS07070;Name=LU604_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07070;old_locus_tag=LU604_07070 NZ_CP089942.1 Protein Homology CDS 1345052 1345252 . + 0 ID=cds-WP_233480261.1;Parent=gene-LU604_RS07070;Dbxref=Genbank:WP_233480261.1;Name=WP_233480261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456842.1;locus_tag=LU604_RS07070;product=hypothetical protein;protein_id=WP_233480261.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1345254 1346117 . + . ID=gene-LU604_RS07075;Name=LU604_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07075;old_locus_tag=LU604_07075 NZ_CP089942.1 Protein Homology CDS 1345254 1346117 . + 0 ID=cds-WP_233480262.1;Parent=gene-LU604_RS07075;Dbxref=Genbank:WP_233480262.1;Name=WP_233480262.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809180.1;locus_tag=LU604_RS07075;product=DNA cytosine methyltransferase;protein_id=WP_233480262.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1346110 1346685 . + . ID=gene-LU604_RS07080;Name=LU604_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07080;old_locus_tag=LU604_07080 NZ_CP089942.1 Protein Homology CDS 1346110 1346685 . + 0 ID=cds-WP_233480263.1;Parent=gene-LU604_RS07080;Dbxref=Genbank:WP_233480263.1;Name=WP_233480263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203209.1;locus_tag=LU604_RS07080;product=recombination protein NinG;protein_id=WP_233480263.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1346682 1346864 . + . ID=gene-LU604_RS07085;Name=LU604_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07085;old_locus_tag=LU604_07085 NZ_CP089942.1 GeneMarkS-2+ CDS 1346682 1346864 . + 0 ID=cds-WP_233480264.1;Parent=gene-LU604_RS07085;Dbxref=Genbank:WP_233480264.1;Name=WP_233480264.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07085;product=hypothetical protein;protein_id=WP_233480264.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1346861 1347643 . + . ID=gene-LU604_RS07090;Name=LU604_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07090;old_locus_tag=LU604_07090 NZ_CP089942.1 Protein Homology CDS 1346861 1347643 . + 0 ID=cds-WP_233480265.1;Parent=gene-LU604_RS07090;Dbxref=Genbank:WP_233480265.1;Name=WP_233480265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918406.1;locus_tag=LU604_RS07090;product=antitermination protein;protein_id=WP_233480265.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1347867 1348379 . - . ID=gene-LU604_RS07095;Name=LU604_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07095;old_locus_tag=LU604_07095 NZ_CP089942.1 Protein Homology CDS 1347867 1348379 . - 0 ID=cds-WP_233480266.1;Parent=gene-LU604_RS07095;Dbxref=Genbank:WP_233480266.1;Name=WP_233480266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288044.1;locus_tag=LU604_RS07095;product=hypothetical protein;protein_id=WP_233480266.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1348549 1348857 . + . ID=gene-LU604_RS07100;Name=LU604_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07100;old_locus_tag=LU604_07100 NZ_CP089942.1 Protein Homology CDS 1348549 1348857 . + 0 ID=cds-WP_233480267.1;Parent=gene-LU604_RS07100;Dbxref=Genbank:WP_233480267.1;Name=WP_233480267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814359.1;locus_tag=LU604_RS07100;product=phage holin family protein;protein_id=WP_233480267.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1348901 1349386 . + . ID=gene-LU604_RS07105;Name=LU604_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07105;old_locus_tag=LU604_07105 NZ_CP089942.1 Protein Homology CDS 1348901 1349386 . + 0 ID=cds-WP_198292564.1;Parent=gene-LU604_RS07105;Dbxref=Genbank:WP_198292564.1;Name=WP_198292564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242417.1;locus_tag=LU604_RS07105;product=HNH endonuclease signature motif containing protein;protein_id=WP_198292564.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1349383 1349808 . + . ID=gene-LU604_RS07110;Name=LU604_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07110;old_locus_tag=LU604_07110 NZ_CP089942.1 Protein Homology CDS 1349383 1349808 . + 0 ID=cds-WP_016193237.1;Parent=gene-LU604_RS07110;Dbxref=Genbank:WP_016193237.1;Name=WP_016193237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117831.1;locus_tag=LU604_RS07110;product=lysozyme;protein_id=WP_016193237.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1350001 1350198 . + . ID=gene-LU604_RS07115;Name=LU604_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07115;old_locus_tag=LU604_07115 NZ_CP089942.1 Protein Homology CDS 1350001 1350198 . + 0 ID=cds-WP_071598980.1;Parent=gene-LU604_RS07115;Dbxref=Genbank:WP_071598980.1;Name=WP_071598980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012578895.1;locus_tag=LU604_RS07115;product=Rz1 family lipoprotein;protein_id=WP_071598980.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1350294 1351043 . + . ID=gene-LU604_RS07120;Name=LU604_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07120;old_locus_tag=LU604_07120 NZ_CP089942.1 GeneMarkS-2+ CDS 1350294 1351043 . + 0 ID=cds-WP_233481544.1;Parent=gene-LU604_RS07120;Dbxref=Genbank:WP_233481544.1;Name=WP_233481544.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07120;product=hypothetical protein;protein_id=WP_233481544.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1351053 1351481 . + . ID=gene-LU604_RS07125;Name=LU604_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07125;old_locus_tag=LU604_07125 NZ_CP089942.1 GeneMarkS-2+ CDS 1351053 1351481 . + 0 ID=cds-WP_046372151.1;Parent=gene-LU604_RS07125;Dbxref=Genbank:WP_046372151.1;Name=WP_046372151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07125;product=hypothetical protein;protein_id=WP_046372151.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1351433 1351753 . + . ID=gene-LU604_RS07130;Name=LU604_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07130;old_locus_tag=LU604_07130 NZ_CP089942.1 GeneMarkS-2+ CDS 1351433 1351753 . + 0 ID=cds-WP_046371843.1;Parent=gene-LU604_RS07130;Dbxref=Genbank:WP_046371843.1;Name=WP_046371843.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07130;product=hypothetical protein;protein_id=WP_046371843.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1351759 1352238 . + . ID=gene-LU604_RS07135;Name=LU604_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07135;old_locus_tag=LU604_07135 NZ_CP089942.1 Protein Homology CDS 1351759 1352238 . + 0 ID=cds-WP_046371779.1;Parent=gene-LU604_RS07135;Dbxref=Genbank:WP_046371779.1;Name=WP_046371779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729926.1;locus_tag=LU604_RS07135;product=DNA-packaging protein;protein_id=WP_046371779.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1352441 1353964 . + . ID=gene-LU604_RS07140;Name=LU604_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07140;old_locus_tag=LU604_07140 NZ_CP089942.1 Protein Homology CDS 1352441 1353964 . + 0 ID=cds-WP_046371780.1;Parent=gene-LU604_RS07140;Dbxref=Genbank:WP_046371780.1;Name=WP_046371780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000417856.1;locus_tag=LU604_RS07140;product=terminase large subunit;protein_id=WP_046371780.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1353964 1355991 . + . ID=gene-LU604_RS07145;Name=LU604_RS07145;end_range=1355991,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07145;old_locus_tag=LU604_07145;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1353964 1355991 . + 0 ID=cds-LU604_RS07145;Parent=gene-LU604_RS07145;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1355991,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813168.1;locus_tag=LU604_RS07145;partial=true;product=portal protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1356092 1357000 . + . ID=gene-LU604_RS07150;Name=LU604_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07150;old_locus_tag=LU604_07150 NZ_CP089942.1 Protein Homology CDS 1356092 1357000 . + 0 ID=cds-WP_016193239.1;Parent=gene-LU604_RS07150;Dbxref=Genbank:WP_016193239.1;Name=WP_016193239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000438544.1;locus_tag=LU604_RS07150;product=scaffolding protein;protein_id=WP_016193239.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1357012 1358307 . + . ID=gene-LU604_RS07155;Name=LU604_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07155;old_locus_tag=LU604_07155 NZ_CP089942.1 Protein Homology CDS 1357012 1358307 . + 0 ID=cds-WP_016193240.1;Parent=gene-LU604_RS07155;Dbxref=Genbank:WP_016193240.1;Name=WP_016193240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907908.1;locus_tag=LU604_RS07155;product=hypothetical protein;protein_id=WP_016193240.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1358349 1358633 . + . ID=gene-LU604_RS07160;Name=LU604_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07160;old_locus_tag=LU604_07160 NZ_CP089942.1 Protein Homology CDS 1358349 1358633 . + 0 ID=cds-WP_233481545.1;Parent=gene-LU604_RS07160;Dbxref=Genbank:WP_233481545.1;Name=WP_233481545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835894.1;locus_tag=LU604_RS07160;product=hypothetical protein;protein_id=WP_233481545.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1358617 1359102 . + . ID=gene-LU604_RS07165;Name=LU604_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07165;old_locus_tag=LU604_07165 NZ_CP089942.1 Protein Homology CDS 1358617 1359102 . + 0 ID=cds-WP_046371783.1;Parent=gene-LU604_RS07165;Dbxref=Genbank:WP_046371783.1;Name=WP_046371783.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023080.2;locus_tag=LU604_RS07165;product=hypothetical protein;protein_id=WP_046371783.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1359074 1360849 . + . ID=gene-LU604_RS07170;Name=LU604_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07170;old_locus_tag=LU604_07170 NZ_CP089942.1 Protein Homology CDS 1359074 1360849 . + 0 ID=cds-WP_052734725.1;Parent=gene-LU604_RS07170;Dbxref=Genbank:WP_052734725.1;Name=WP_052734725.1;Ontology_term=GO:0019073;gbkey=CDS;go_process=viral DNA genome packaging|0019073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813163.1;locus_tag=LU604_RS07170;product=packaged DNA stabilization protein;protein_id=WP_052734725.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1360842 1361333 . + . ID=gene-LU604_RS07175;Name=LU604_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07175;old_locus_tag=LU604_07175 NZ_CP089942.1 Protein Homology CDS 1360842 1361333 . + 0 ID=cds-WP_046371784.1;Parent=gene-LU604_RS07175;Dbxref=Genbank:WP_046371784.1;Name=WP_046371784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749455.1;locus_tag=LU604_RS07175;product=hypothetical protein;protein_id=WP_046371784.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1361336 1361725 . + . ID=gene-LU604_RS07180;Name=LU604_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07180;old_locus_tag=LU604_07180 NZ_CP089942.1 GeneMarkS-2+ CDS 1361336 1361725 . + 0 ID=cds-WP_040465691.1;Parent=gene-LU604_RS07180;Dbxref=Genbank:WP_040465691.1;Name=WP_040465691.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07180;product=hypothetical protein;protein_id=WP_040465691.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1361709 1362275 . + . ID=gene-LU604_RS07185;Name=LU604_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07185;old_locus_tag=LU604_07185 NZ_CP089942.1 Protein Homology CDS 1361709 1362275 . + 0 ID=cds-WP_233480270.1;Parent=gene-LU604_RS07185;Dbxref=Genbank:WP_233480270.1;Name=WP_233480270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191788.1;locus_tag=LU604_RS07185;product=DNA transfer protein;protein_id=WP_233480270.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1362287 1363459 . + . ID=gene-LU604_RS07190;Name=LU604_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07190;old_locus_tag=LU604_07190 NZ_CP089942.1 Protein Homology CDS 1362287 1363459 . + 0 ID=cds-WP_233480271.1;Parent=gene-LU604_RS07190;Dbxref=Genbank:WP_233480271.1;Name=WP_233480271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191789.1;locus_tag=LU604_RS07190;product=phage DNA ejection protein;protein_id=WP_233480271.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1363456 1365714 . + . ID=gene-LU604_RS07195;Name=LU604_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07195;old_locus_tag=LU604_07195 NZ_CP089942.1 Protein Homology CDS 1363456 1365714 . + 0 ID=cds-WP_233480272.1;Parent=gene-LU604_RS07195;Dbxref=Genbank:WP_233480272.1;Name=WP_233480272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729822.1;locus_tag=LU604_RS07195;product=hypothetical protein;protein_id=WP_233480272.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1365723 1366157 . - . ID=gene-LU604_RS07200;Name=LU604_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07200;old_locus_tag=LU604_07200 NZ_CP089942.1 GeneMarkS-2+ CDS 1365723 1366157 . - 0 ID=cds-WP_233480273.1;Parent=gene-LU604_RS07200;Dbxref=Genbank:WP_233480273.1;Name=WP_233480273.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07200;product=hypothetical protein;protein_id=WP_233480273.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1366204 1367472 . + . ID=gene-LU604_RS07205;Name=LU604_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07205;old_locus_tag=LU604_07205 NZ_CP089942.1 Protein Homology CDS 1366204 1367472 . + 0 ID=cds-WP_233480274.1;Parent=gene-LU604_RS07205;Dbxref=Genbank:WP_233480274.1;Name=WP_233480274.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020577.2;locus_tag=LU604_RS07205;product=phage tailspike protein;protein_id=WP_233480274.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1367538 1368689 . - . ID=gene-LU604_RS07210;Name=LU604_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07210;old_locus_tag=LU604_07210 NZ_CP089942.1 Protein Homology CDS 1367538 1368689 . - 0 ID=cds-WP_233480275.1;Parent=gene-LU604_RS07210;Dbxref=Genbank:WP_233480275.1;Name=WP_233480275.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195404.1;locus_tag=LU604_RS07210;product=tyrosine-type recombinase/integrase;protein_id=WP_233480275.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1368850 1368924 . - . ID=gene-LU604_RS07215;Name=LU604_RS07215;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS07215;old_locus_tag=LU604_07215 NZ_CP089942.1 tRNAscan-SE tRNA 1368850 1368924 . - . ID=rna-LU604_RS07215;Parent=gene-LU604_RS07215;anticodon=(pos:complement(1368889..1368891));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS07215;product=tRNA-Arg NZ_CP089942.1 tRNAscan-SE exon 1368850 1368924 . - . ID=exon-LU604_RS07215-1;Parent=rna-LU604_RS07215;anticodon=(pos:complement(1368889..1368891));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS07215;product=tRNA-Arg NZ_CP089942.1 RefSeq pseudogene 1369120 1370269 . + . ID=gene-LU604_RS07220;Name=LU604_RS07220;end_range=1370269,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07220;old_locus_tag=LU604_07220;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1369120 1370269 . + 0 ID=cds-LU604_RS07220;Parent=gene-LU604_RS07220;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1370269,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120146.1;locus_tag=LU604_RS07220;partial=true;product=integrase family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1370421 1371628 . + . ID=gene-LU604_RS07225;Name=LU604_RS07225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07225;old_locus_tag=LU604_07225;pseudo=true NZ_CP089942.1 Protein Homology CDS 1370421 1371628 . + 0 ID=cds-LU604_RS07225;Parent=gene-LU604_RS07225;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU604_RS07225;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1371956 1372150 . + . ID=gene-LU604_RS07230;Name=LU604_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07230;old_locus_tag=LU604_07230 NZ_CP089942.1 Protein Homology CDS 1371956 1372150 . + 0 ID=cds-WP_232426828.1;Parent=gene-LU604_RS07230;Dbxref=Genbank:WP_232426828.1;Name=WP_232426828.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039803.1;locus_tag=LU604_RS07230;product=DUF6516 family protein;protein_id=WP_232426828.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1372155 1372514 . + . ID=gene-LU604_RS07235;Name=LU604_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07235;old_locus_tag=LU604_07235 NZ_CP089942.1 Protein Homology CDS 1372155 1372514 . + 0 ID=cds-WP_233480277.1;Parent=gene-LU604_RS07235;Dbxref=Genbank:WP_233480277.1;Name=WP_233480277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004607.1;locus_tag=LU604_RS07235;product=transcriptional regulator;protein_id=WP_233480277.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1372733 1373188 . - . ID=gene-LU604_RS07240;Name=LU604_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07240;old_locus_tag=LU604_07240 NZ_CP089942.1 Protein Homology CDS 1372733 1373188 . - 0 ID=cds-WP_233480278.1;Parent=gene-LU604_RS07240;Dbxref=Genbank:WP_233480278.1;Name=WP_233480278.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: protein motif:HMM:NF018262.2;locus_tag=LU604_RS07240;product=antiterminator Q family protein;protein_id=WP_233480278.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1373265 1373492 . - . ID=gene-LU604_RS07245;Name=LU604_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07245;old_locus_tag=LU604_07245 NZ_CP089942.1 GeneMarkS-2+ CDS 1373265 1373492 . - 0 ID=cds-WP_016190067.1;Parent=gene-LU604_RS07245;Dbxref=Genbank:WP_016190067.1;Name=WP_016190067.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07245;product=hypothetical protein;protein_id=WP_016190067.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1373622 1374457 . + . ID=gene-LU604_RS07250;Name=LU604_RS07250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07250;old_locus_tag=LU604_07250;pseudo=true NZ_CP089942.1 Protein Homology CDS 1373622 1374457 . + 0 ID=cds-LU604_RS07250;Parent=gene-LU604_RS07250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190077.1;locus_tag=LU604_RS07250;product=DUF3289 family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1374454 1374924 . + . ID=gene-LU604_RS07255;Name=LU604_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07255;old_locus_tag=LU604_07255 NZ_CP089942.1 Protein Homology CDS 1374454 1374924 . + 0 ID=cds-WP_233480279.1;Parent=gene-LU604_RS07255;Dbxref=Genbank:WP_233480279.1;Name=WP_233480279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190066.1;locus_tag=LU604_RS07255;product=DUF943 family protein;protein_id=WP_233480279.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1375254 1376293 . + . ID=gene-LU604_RS07260;Name=LU604_RS07260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07260;old_locus_tag=LU604_07260;pseudo=true NZ_CP089942.1 Protein Homology CDS 1375254 1376293 . + 0 ID=cds-LU604_RS07260;Parent=gene-LU604_RS07260;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS07260;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1376413 1376772 . + . ID=gene-LU604_RS07265;Name=LU604_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07265;old_locus_tag=LU604_07265 NZ_CP089942.1 Protein Homology CDS 1376413 1376772 . + 0 ID=cds-WP_016190063.1;Parent=gene-LU604_RS07265;Dbxref=Genbank:WP_016190063.1;Name=WP_016190063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000915539.1;locus_tag=LU604_RS07265;product=GtrA family protein;protein_id=WP_016190063.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1376769 1377249 . + . ID=gene-LU604_RS07270;Name=LU604_RS07270;end_range=1377249,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07270;old_locus_tag=LU604_07270;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1376769 1377249 . + 0 ID=cds-LU604_RS07270;Parent=gene-LU604_RS07270;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1377249,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000703634.1;locus_tag=LU604_RS07270;partial=true;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1377326 1377717 . + . ID=gene-LU604_RS07275;Name=LU604_RS07275;end_range=1377717,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07275;old_locus_tag=LU604_07275;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1377326 1377717 . + 0 ID=cds-LU604_RS07275;Parent=gene-LU604_RS07275;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1377717,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611429.1;locus_tag=LU604_RS07275;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1377865 1378176 . + . ID=gene-LU604_RS07280;Name=LU604_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07280;old_locus_tag=LU604_07280 NZ_CP089942.1 GeneMarkS-2+ CDS 1377865 1378176 . + 0 ID=cds-WP_233480280.1;Parent=gene-LU604_RS07280;Dbxref=Genbank:WP_233480280.1;Name=WP_233480280.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07280;product=hypothetical protein;protein_id=WP_233480280.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1378272 1378418 . + . ID=gene-LU604_RS07285;Name=LU604_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07285;old_locus_tag=LU604_07285 NZ_CP089942.1 GeneMarkS-2+ CDS 1378272 1378418 . + 0 ID=cds-WP_157275211.1;Parent=gene-LU604_RS07285;Dbxref=Genbank:WP_157275211.1;Name=WP_157275211.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07285;product=hypothetical protein;protein_id=WP_157275211.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1378438 1378614 . + . ID=gene-LU604_RS07290;Name=LU604_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07290;old_locus_tag=LU604_07290 NZ_CP089942.1 GeneMarkS-2+ CDS 1378438 1378614 . + 0 ID=cds-WP_233480281.1;Parent=gene-LU604_RS07290;Dbxref=Genbank:WP_233480281.1;Name=WP_233480281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07290;product=hypothetical protein;protein_id=WP_233480281.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1378749 1379753 . - . ID=gene-LU604_RS07295;Name=LU604_RS07295;end_range=1379753,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07295;old_locus_tag=LU604_07295;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1378749 1379753 . - 0 ID=cds-LU604_RS07295;Parent=gene-LU604_RS07295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=1379753,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU604_RS07295;partial=true;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1379817 1379972 . - . ID=gene-LU604_RS07300;Name=LU604_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07300;old_locus_tag=LU604_07300 NZ_CP089942.1 GeneMarkS-2+ CDS 1379817 1379972 . - 0 ID=cds-WP_233478597.1-3;Parent=gene-LU604_RS07300;Dbxref=Genbank:WP_233478597.1;Name=WP_233478597.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07300;product=hypothetical protein;protein_id=WP_233478597.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1379975 1380349 . + . ID=gene-LU604_RS07305;Name=LU604_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07305;old_locus_tag=LU604_07305 NZ_CP089942.1 GeneMarkS-2+ CDS 1379975 1380349 . + 0 ID=cds-WP_233480282.1;Parent=gene-LU604_RS07305;Dbxref=Genbank:WP_233480282.1;Name=WP_233480282.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07305;product=hypothetical protein;protein_id=WP_233480282.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1380391 1380696 . - . ID=gene-LU604_RS07310;Name=LU604_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07310;old_locus_tag=LU604_07310 NZ_CP089942.1 Protein Homology CDS 1380391 1380696 . - 0 ID=cds-WP_016190059.1;Parent=gene-LU604_RS07310;Dbxref=Genbank:WP_016190059.1;Name=WP_016190059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669403.1;locus_tag=LU604_RS07310;product=DUF1493 family protein;protein_id=WP_016190059.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1380690 1381130 . - . ID=gene-LU604_RS07315;Name=LU604_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07315;old_locus_tag=LU604_07315 NZ_CP089942.1 Protein Homology CDS 1380690 1381130 . - 0 ID=cds-WP_233480283.1;Parent=gene-LU604_RS07315;Dbxref=Genbank:WP_233480283.1;Name=WP_233480283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190058.1;locus_tag=LU604_RS07315;product=hypothetical protein;protein_id=WP_233480283.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1381335 1381580 . - . ID=gene-LU604_RS07320;Name=LU604_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07320;old_locus_tag=LU604_07320 NZ_CP089942.1 Protein Homology CDS 1381335 1381580 . - 0 ID=cds-WP_233480284.1;Parent=gene-LU604_RS07320;Dbxref=Genbank:WP_233480284.1;Name=WP_233480284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190057.1;locus_tag=LU604_RS07320;product=DinI-like family protein;protein_id=WP_233480284.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1381909 1382719 . + . ID=gene-LU604_RS07325;Name=LU604_RS07325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07325;old_locus_tag=LU604_07325;pseudo=true NZ_CP089942.1 Protein Homology CDS 1381909 1382719 . + 0 ID=cds-LU604_RS07325;Parent=gene-LU604_RS07325;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611700.1;locus_tag=LU604_RS07325;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1384011 1384376 . + . ID=gene-LU604_RS07330;Name=LU604_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07330;old_locus_tag=LU604_07330 NZ_CP089942.1 Protein Homology CDS 1384011 1384376 . + 0 ID=cds-WP_233480285.1;Parent=gene-LU604_RS07330;Dbxref=Genbank:WP_233480285.1;Name=WP_233480285.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015853.2;locus_tag=LU604_RS07330;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_233480285.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1384735 1385496 . + . ID=gene-LU604_RS07335;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=LU604_RS07335;old_locus_tag=LU604_07335 NZ_CP089942.1 Protein Homology CDS 1384735 1385496 . + 0 ID=cds-WP_016190053.1;Parent=gene-LU604_RS07335;Dbxref=Genbank:WP_016190053.1;Name=WP_016190053.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203158.1;locus_tag=LU604_RS07335;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_016190053.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1385544 1386827 . - . ID=gene-LU604_RS07340;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=LU604_RS07340;old_locus_tag=LU604_07340 NZ_CP089942.1 Protein Homology CDS 1385544 1386827 . - 0 ID=cds-WP_233480286.1;Parent=gene-LU604_RS07340;Dbxref=Genbank:WP_233480286.1;Name=WP_233480286.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001766332.1;locus_tag=LU604_RS07340;product=long-chain fatty acid transporter FadL;protein_id=WP_233480286.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1387203 1387499 . + . ID=gene-LU604_RS07345;Name=LU604_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07345;old_locus_tag=LU604_07345 NZ_CP089942.1 Protein Homology CDS 1387203 1387499 . + 0 ID=cds-WP_233480287.1;Parent=gene-LU604_RS07345;Dbxref=Genbank:WP_233480287.1;Name=WP_233480287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015841013.1;locus_tag=LU604_RS07345;product=YfcZ/YiiS family protein;protein_id=WP_233480287.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1387673 1387849 . + . ID=gene-LU604_RS07350;Name=LU604_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07350;old_locus_tag=LU604_07350 NZ_CP089942.1 GeneMarkS-2+ CDS 1387673 1387849 . + 0 ID=cds-WP_016190050.1;Parent=gene-LU604_RS07350;Dbxref=Genbank:WP_016190050.1;Name=WP_016190050.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07350;product=3-ketoacyl-CoA thiolase;protein_id=WP_016190050.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1387934 1388272 . - . ID=gene-LU604_RS07355;Name=LU604_RS07355;end_range=1388272,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07355;old_locus_tag=LU604_07355;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1387934 1388272 . - 0 ID=cds-LU604_RS07355;Parent=gene-LU604_RS07355;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1388272,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000268373.1;locus_tag=LU604_RS07355;partial=true;product=recombinase family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1388412 1389416 . - . ID=gene-LU604_RS07360;Name=LU604_RS07360;end_range=1389416,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07360;old_locus_tag=LU604_07360;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1388412 1389416 . - 0 ID=cds-LU604_RS07360;Parent=gene-LU604_RS07360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=1389416,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU604_RS07360;partial=true;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1389480 1389635 . - . ID=gene-LU604_RS07365;Name=LU604_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07365;old_locus_tag=LU604_07365 NZ_CP089942.1 GeneMarkS-2+ CDS 1389480 1389635 . - 0 ID=cds-WP_233478597.1-4;Parent=gene-LU604_RS07365;Dbxref=Genbank:WP_233478597.1;Name=WP_233478597.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07365;product=hypothetical protein;protein_id=WP_233478597.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1389720 1390382 . - . ID=gene-LU604_RS07370;Name=LU604_RS07370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07370;old_locus_tag=LU604_07370;partial=true;pseudo=true;start_range=.,1389720 NZ_CP089942.1 Protein Homology CDS 1389720 1390382 . - 0 ID=cds-LU604_RS07370;Parent=gene-LU604_RS07370;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013360143.1;locus_tag=LU604_RS07370;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1389720;transl_table=11 NZ_CP089942.1 RefSeq gene 1390638 1390826 . + . ID=gene-LU604_RS07375;Name=LU604_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07375;old_locus_tag=LU604_07375 NZ_CP089942.1 Protein Homology CDS 1390638 1390826 . + 0 ID=cds-WP_233478696.1;Parent=gene-LU604_RS07375;Dbxref=Genbank:WP_233478696.1;Name=WP_233478696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322936.1;locus_tag=LU604_RS07375;product=hypothetical protein;protein_id=WP_233478696.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1390835 1392035 . + . ID=gene-LU604_RS07380;Name=LU604_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07380;old_locus_tag=LU604_07380 NZ_CP089942.1 Protein Homology CDS 1390835 1391662 . + 0 ID=cds-WP_233478723.1;Parent=gene-LU604_RS07380;Dbxref=Genbank:WP_233478723.1;Name=WP_233478723.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS07380;product=IS91 family transposase;protein_id=WP_233478723.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 1391664 1392035 . + 0 ID=cds-WP_233478723.1;Parent=gene-LU604_RS07380;Dbxref=Genbank:WP_233478723.1;Name=WP_233478723.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS07380;product=IS91 family transposase;protein_id=WP_233478723.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1392411 1392638 . - . ID=gene-LU604_RS07385;Name=LU604_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07385;old_locus_tag=LU604_07385 NZ_CP089942.1 Protein Homology CDS 1392411 1392638 . - 0 ID=cds-WP_020314634.1;Parent=gene-LU604_RS07385;Dbxref=Genbank:WP_020314634.1;Name=WP_020314634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020314634.1;locus_tag=LU604_RS07385;product=hypothetical protein;protein_id=WP_020314634.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1392683 1393309 . - . ID=gene-LU604_RS07390;Name=LU604_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07390;old_locus_tag=LU604_07390 NZ_CP089942.1 Protein Homology CDS 1392683 1393309 . - 0 ID=cds-WP_078005063.1;Parent=gene-LU604_RS07390;Dbxref=Genbank:WP_078005063.1;Name=WP_078005063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322831.1;locus_tag=LU604_RS07390;product=ParA family protein;protein_id=WP_078005063.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1393542 1394765 . + . ID=gene-LU604_RS07395;Name=LU604_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07395;old_locus_tag=LU604_07395 NZ_CP089942.1 Protein Homology CDS 1393542 1394765 . + 0 ID=cds-WP_233478869.1;Parent=gene-LU604_RS07395;Dbxref=Genbank:WP_233478869.1;Name=WP_233478869.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU604_RS07395;product=IS91 family transposase;protein_id=WP_233478869.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1395243 1395899 . + . ID=gene-LU604_RS07400;Name=LU604_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07400;old_locus_tag=LU604_07400 NZ_CP089942.1 Protein Homology CDS 1395243 1395899 . + 0 ID=cds-WP_233480288.1;Parent=gene-LU604_RS07400;Dbxref=Genbank:WP_233480288.1;Name=WP_233480288.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001404091.1;locus_tag=LU604_RS07400;product=recombinase family protein;protein_id=WP_233480288.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1395889 1396143 . + . ID=gene-LU604_RS07405;Name=LU604_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07405;old_locus_tag=LU604_07405 NZ_CP089942.1 Protein Homology CDS 1395889 1396143 . + 0 ID=cds-WP_233480289.1;Parent=gene-LU604_RS07405;Dbxref=Genbank:WP_233480289.1;Name=WP_233480289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019725034.1;locus_tag=LU604_RS07405;product=hypothetical protein;protein_id=WP_233480289.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1396280 1397206 . + . ID=gene-LU604_RS07410;Name=LU604_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07410;old_locus_tag=LU604_07410 NZ_CP089942.1 Protein Homology CDS 1396280 1397206 . + 0 ID=cds-WP_233480290.1;Parent=gene-LU604_RS07410;Dbxref=Genbank:WP_233480290.1;Name=WP_233480290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=LU604_RS07410;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_233480290.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1397423 1397758 . - . ID=gene-LU604_RS26930;Name=LU604_RS26930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26930 NZ_CP089942.1 Protein Homology CDS 1397423 1397758 . - 0 ID=cds-WP_233481440.1;Parent=gene-LU604_RS26930;Dbxref=Genbank:WP_233481440.1;Name=WP_233481440.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS26930;product=hypothetical protein;protein_id=WP_233481440.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1397770 1398648 . - . ID=gene-LU604_RS07415;Name=LU604_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07415;old_locus_tag=LU604_07415 NZ_CP089942.1 Protein Homology CDS 1397770 1398648 . - 0 ID=cds-WP_267938747.1;Parent=gene-LU604_RS07415;Dbxref=Genbank:WP_267938747.1;Name=WP_267938747.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU604_RS07415;product=IS91 family transposase;protein_id=WP_267938747.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1398738 1399076 . + . ID=gene-LU604_RS07420;Name=LU604_RS07420;end_range=1399076,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07420;old_locus_tag=LU604_07420;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1398738 1399076 . + 0 ID=cds-LU604_RS07420;Parent=gene-LU604_RS07420;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1399076,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455304.1;locus_tag=LU604_RS07420;partial=true;product=DUF2913 family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1399359 1399946 . + . ID=gene-LU604_RS07425;Name=LU604_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07425;old_locus_tag=LU604_07425 NZ_CP089942.1 Protein Homology CDS 1399359 1399946 . + 0 ID=cds-WP_233480291.1;Parent=gene-LU604_RS07425;Dbxref=Genbank:WP_233480291.1;Name=WP_233480291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091963.1;locus_tag=LU604_RS07425;product=recombinase family protein;protein_id=WP_233480291.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1400071 1401036 . + . ID=gene-LU604_RS07430;Name=LU604_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07430;old_locus_tag=LU604_07430 NZ_CP089942.1 Protein Homology CDS 1400071 1401036 . + 0 ID=cds-WP_233480292.1;Parent=gene-LU604_RS07430;Dbxref=Genbank:WP_233480292.1;Name=WP_233480292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004150693.1;locus_tag=LU604_RS07430;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_233480292.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1401076 1401657 . - . ID=gene-LU604_RS07435;Name=LU604_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07435;old_locus_tag=LU604_07435 NZ_CP089942.1 Protein Homology CDS 1401076 1401657 . - 0 ID=cds-WP_233480293.1;Parent=gene-LU604_RS07435;Dbxref=Genbank:WP_233480293.1;Name=WP_233480293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016479974.1;locus_tag=LU604_RS07435;product=DUF2913 family protein;protein_id=WP_233480293.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1401684 1402274 . - . ID=gene-LU604_RS07440;Name=LU604_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07440;old_locus_tag=LU604_07440 NZ_CP089942.1 Protein Homology CDS 1401684 1402274 . - 0 ID=cds-WP_233480294.1;Parent=gene-LU604_RS07440;Dbxref=Genbank:WP_233480294.1;Name=WP_233480294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016479975.1;locus_tag=LU604_RS07440;product=hypothetical protein;protein_id=WP_233480294.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1402410 1403625 . + . ID=gene-LU604_RS07445;Name=LU604_RS07445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07445;old_locus_tag=LU604_07445;pseudo=true NZ_CP089942.1 Protein Homology CDS 1402410 1403625 . + 0 ID=cds-LU604_RS07445;Parent=gene-LU604_RS07445;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU604_RS07445;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1404571 1405170 . + . ID=gene-LU604_RS07450;Name=LU604_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07450;old_locus_tag=LU604_07450 NZ_CP089942.1 GeneMarkS-2+ CDS 1404571 1405170 . + 0 ID=cds-WP_233480297.1;Parent=gene-LU604_RS07450;Dbxref=Genbank:WP_233480297.1;Name=WP_233480297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07450;product=hypothetical protein;protein_id=WP_233480297.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1405388 1407139 . + . ID=gene-LU604_RS07455;Name=LU604_RS07455;end_range=1407139,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07455;old_locus_tag=LU604_07455;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1405388 1407139 . + 0 ID=cds-LU604_RS07455;Parent=gene-LU604_RS07455;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1407139,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606384.1;locus_tag=LU604_RS07455;partial=true;product=Tn3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1407226 1407780 . + . ID=gene-LU604_RS07460;Name=LU604_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07460;old_locus_tag=LU604_07460 NZ_CP089942.1 Protein Homology CDS 1407226 1407780 . + 0 ID=cds-WP_233480298.1;Parent=gene-LU604_RS07460;Dbxref=Genbank:WP_233480298.1;Name=WP_233480298.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025677.2;locus_tag=LU604_RS07460;product=transposase zinc-binding domain-containing protein;protein_id=WP_233480298.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1408437 1408655 . + . ID=gene-LU604_RS07465;Name=LU604_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07465;old_locus_tag=LU604_07465 NZ_CP089942.1 GeneMarkS-2+ CDS 1408437 1408655 . + 0 ID=cds-WP_233479511.1;Parent=gene-LU604_RS07465;Dbxref=Genbank:WP_233479511.1;Name=WP_233479511.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07465;product=hypothetical protein;protein_id=WP_233479511.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1409145 1409239 . - . ID=gene-LU604_RS07470;Name=LU604_RS07470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07470;old_locus_tag=LU604_07470;partial=true;pseudo=true;start_range=.,1409145 NZ_CP089942.1 Protein Homology CDS 1409145 1409239 . - 0 ID=cds-LU604_RS07470;Parent=gene-LU604_RS07470;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=LU604_RS07470;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,1409145;transl_table=11 NZ_CP089942.1 RefSeq gene 1409871 1410239 . + . ID=gene-LU604_RS07475;Name=LU604_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07475;old_locus_tag=LU604_07475 NZ_CP089942.1 GeneMarkS-2+ CDS 1409871 1410239 . + 0 ID=cds-WP_233480299.1;Parent=gene-LU604_RS07475;Dbxref=Genbank:WP_233480299.1;Name=WP_233480299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07475;product=hypothetical protein;protein_id=WP_233480299.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1410399 1410626 . - . ID=gene-LU604_RS07480;Name=LU604_RS07480;end_range=1410626,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07480;old_locus_tag=LU604_07480;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1410399 1410626 . - 0 ID=cds-LU604_RS07480;Parent=gene-LU604_RS07480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1410626,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=LU604_RS07480;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1410888 1411424 . + . ID=gene-LU604_RS07485;Name=LU604_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07485;old_locus_tag=LU604_07485 NZ_CP089942.1 Protein Homology CDS 1410888 1411424 . + 0 ID=cds-WP_233481546.1;Parent=gene-LU604_RS07485;Dbxref=Genbank:WP_233481546.1;Name=WP_233481546.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025677.2;locus_tag=LU604_RS07485;product=transposase zinc-binding domain-containing protein;protein_id=WP_233481546.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1411406 1412410 . + . ID=gene-LU604_RS07490;Name=LU604_RS07490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07490;old_locus_tag=LU604_07490;partial=true;pseudo=true;start_range=.,1411406 NZ_CP089942.1 Protein Homology CDS 1411406 1412410 . + 0 ID=cds-LU604_RS07490;Parent=gene-LU604_RS07490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU604_RS07490;partial=true;product=IS91 family transposase;pseudo=true;start_range=.,1411406;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1412554 1412880 . + . ID=gene-LU604_RS07495;Name=LU604_RS07495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07495;old_locus_tag=LU604_07495;partial=true;pseudo=true;start_range=.,1412554 NZ_CP089942.1 Protein Homology CDS 1412554 1412880 . + 0 ID=cds-LU604_RS07495;Parent=gene-LU604_RS07495;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002225475.1;locus_tag=LU604_RS07495;partial=true;product=incFII family plasmid replication initiator RepA;pseudo=true;start_range=.,1412554;transl_table=11 NZ_CP089942.1 RefSeq gene 1413893 1414135 . + . ID=gene-LU604_RS07500;Name=LU604_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07500;old_locus_tag=LU604_07500 NZ_CP089942.1 Protein Homology CDS 1413893 1414135 . + 0 ID=cds-WP_008815935.1;Parent=gene-LU604_RS07500;Dbxref=Genbank:WP_008815935.1;Name=WP_008815935.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308488.1;locus_tag=LU604_RS07500;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_008815935.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1414128 1414412 . + . ID=gene-LU604_RS07505;Name=LU604_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07505;old_locus_tag=LU604_07505 NZ_CP089942.1 Protein Homology CDS 1414128 1414412 . + 0 ID=cds-WP_233480300.1;Parent=gene-LU604_RS07505;Dbxref=Genbank:WP_233480300.1;Name=WP_233480300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148850.1;locus_tag=LU604_RS07505;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_233480300.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1414572 1415141 . - . ID=gene-LU604_RS26935;Name=LU604_RS26935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26935 NZ_CP089942.1 Protein Homology CDS 1414572 1415141 . - 0 ID=cds-WP_267938748.1;Parent=gene-LU604_RS26935;Dbxref=Genbank:WP_267938748.1;Name=WP_267938748.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS26935;product=transposase;protein_id=WP_267938748.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1415131 1415796 . - . ID=gene-LU604_RS26940;Name=LU604_RS26940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS26940;partial=true;pseudo=true;start_range=.,1415131 NZ_CP089942.1 Protein Homology CDS 1415131 1415796 . - 0 ID=cds-LU604_RS26940;Parent=gene-LU604_RS26940;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS26940;partial=true;product=transposase zinc-binding domain-containing protein;pseudo=true;start_range=.,1415131;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1415878 1416129 . - . ID=gene-LU604_RS07515;Name=LU604_RS07515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07515;old_locus_tag=LU604_07515;partial=true;pseudo=true;start_range=.,1415878 NZ_CP089942.1 Protein Homology CDS 1415878 1416129 . - 0 ID=cds-LU604_RS07515;Parent=gene-LU604_RS07515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461699.1;locus_tag=LU604_RS07515;partial=true;product=recombinase family protein;pseudo=true;start_range=.,1415878;transl_table=11 NZ_CP089942.1 RefSeq gene 1416179 1416667 . + . ID=gene-LU604_RS07520;Name=LU604_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07520;old_locus_tag=LU604_07520 NZ_CP089942.1 Protein Homology CDS 1416179 1416667 . + 0 ID=cds-WP_233480753.1;Parent=gene-LU604_RS07520;Dbxref=Genbank:WP_233480753.1;Name=WP_233480753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191667.1;locus_tag=LU604_RS07520;product=phage tail protein;protein_id=WP_233480753.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1416667 1417263 . + . ID=gene-LU604_RS07525;Name=LU604_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07525;old_locus_tag=LU604_07525 NZ_CP089942.1 Protein Homology CDS 1416667 1417263 . + 0 ID=cds-WP_016191668.1;Parent=gene-LU604_RS07525;Dbxref=Genbank:WP_016191668.1;Name=WP_016191668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243405.1;locus_tag=LU604_RS07525;product=tail fiber assembly protein;protein_id=WP_016191668.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1417238 1417846 . - . ID=gene-LU604_RS07530;Name=LU604_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07530;old_locus_tag=LU604_07530 NZ_CP089942.1 Protein Homology CDS 1417238 1417846 . - 0 ID=cds-WP_016191669.1;Parent=gene-LU604_RS07530;Dbxref=Genbank:WP_016191669.1;Name=WP_016191669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243405.1;locus_tag=LU604_RS07530;product=tail assembly chaperone;protein_id=WP_016191669.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1417846 1418760 . - . ID=gene-LU604_RS07535;Name=LU604_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07535;old_locus_tag=LU604_07535 NZ_CP089942.1 Protein Homology CDS 1417846 1418760 . - 0 ID=cds-WP_233480302.1;Parent=gene-LU604_RS07535;Dbxref=Genbank:WP_233480302.1;Name=WP_233480302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000002042.1;locus_tag=LU604_RS07535;product=tail fiber protein;protein_id=WP_233480302.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1418763 1419341 . - . ID=gene-LU604_RS07540;Name=LU604_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07540;old_locus_tag=LU604_07540 NZ_CP089942.1 Protein Homology CDS 1418763 1419341 . - 0 ID=cds-WP_233480303.1;Parent=gene-LU604_RS07540;Dbxref=Genbank:WP_233480303.1;Name=WP_233480303.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000852583.1;locus_tag=LU604_RS07540;product=phage tail protein I;protein_id=WP_233480303.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1419334 1420437 . - . ID=gene-LU604_RS07545;Name=LU604_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07545;old_locus_tag=LU604_07545 NZ_CP089942.1 Protein Homology CDS 1419334 1420437 . - 0 ID=cds-WP_016191672.1;Parent=gene-LU604_RS07545;Dbxref=Genbank:WP_016191672.1;Name=WP_016191672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191672.1;locus_tag=LU604_RS07545;product=baseplate J/gp47 family protein;protein_id=WP_016191672.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1420428 1420775 . - . ID=gene-LU604_RS07550;Name=LU604_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07550;old_locus_tag=LU604_07550 NZ_CP089942.1 Protein Homology CDS 1420428 1420775 . - 0 ID=cds-WP_016191673.1;Parent=gene-LU604_RS07550;Dbxref=Genbank:WP_016191673.1;Name=WP_016191673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000859115.1;locus_tag=LU604_RS07550;product=GPW/gp25 family protein;protein_id=WP_016191673.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1420830 1421342 . - . ID=gene-LU604_RS07555;Name=LU604_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07555;old_locus_tag=LU604_07555 NZ_CP089942.1 Protein Homology CDS 1420830 1421342 . - 0 ID=cds-WP_016191674.1;Parent=gene-LU604_RS07555;Dbxref=Genbank:WP_016191674.1;Name=WP_016191674.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122455.1;locus_tag=LU604_RS07555;product=phage baseplate assembly protein V;protein_id=WP_016191674.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1421342 1422511 . - . ID=gene-LU604_RS07560;Name=LU604_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07560;old_locus_tag=LU604_07560 NZ_CP089942.1 Protein Homology CDS 1421342 1422511 . - 0 ID=cds-WP_233480304.1;Parent=gene-LU604_RS07560;Dbxref=Genbank:WP_233480304.1;Name=WP_233480304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000808003.1;locus_tag=LU604_RS07560;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_233480304.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1422499 1422711 . - . ID=gene-LU604_RS07565;Name=LU604_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07565;old_locus_tag=LU604_07565 NZ_CP089942.1 Protein Homology CDS 1422499 1422711 . - 0 ID=cds-WP_198292528.1;Parent=gene-LU604_RS07565;Dbxref=Genbank:WP_198292528.1;Name=WP_198292528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000478222.1;locus_tag=LU604_RS07565;product=tail protein X;protein_id=WP_198292528.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1422711 1423595 . - . ID=gene-LU604_RS07570;Name=LU604_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07570;old_locus_tag=LU604_07570 NZ_CP089942.1 Protein Homology CDS 1422711 1423595 . - 0 ID=cds-WP_016191677.1;Parent=gene-LU604_RS07570;Dbxref=Genbank:WP_016191677.1;Name=WP_016191677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458380.1;locus_tag=LU604_RS07570;product=phage tail protein;protein_id=WP_016191677.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1423595 1424713 . - . ID=gene-LU604_RS07575;Name=LU604_RS07575;end_range=1424713,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07575;old_locus_tag=LU604_07575;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1423595 1424713 . - 0 ID=cds-LU604_RS07575;Parent=gene-LU604_RS07575;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1424713,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122451.1;locus_tag=LU604_RS07575;partial=true;product=phage tail tape measure protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1424773 1425813 . - . ID=gene-LU604_RS07580;Name=LU604_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07580;old_locus_tag=LU604_07580 NZ_CP089942.1 Protein Homology CDS 1424773 1425813 . - 0 ID=cds-WP_233478882.1;Parent=gene-LU604_RS07580;Dbxref=Genbank:WP_233478882.1;Name=WP_233478882.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS07580;product=IS481 family transposase;protein_id=WP_233478882.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1425916 1427268 . - . ID=gene-LU604_RS07585;Name=LU604_RS07585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07585;old_locus_tag=LU604_07585;partial=true;pseudo=true;start_range=.,1425916 NZ_CP089942.1 Protein Homology CDS 1425916 1427268 . - 0 ID=cds-LU604_RS07585;Parent=gene-LU604_RS07585;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122451.1;locus_tag=LU604_RS07585;partial=true;product=phage tail tape measure protein;pseudo=true;start_range=.,1425916;transl_table=11 NZ_CP089942.1 RefSeq gene 1427361 1427501 . - . ID=gene-LU604_RS07590;Name=LU604_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07590;old_locus_tag=LU604_07590 NZ_CP089942.1 Protein Homology CDS 1427361 1427501 . - 0 ID=cds-WP_087949712.1;Parent=gene-LU604_RS07590;Dbxref=Genbank:WP_087949712.1;Name=WP_087949712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122450.1;locus_tag=LU604_RS07590;product=GpE family phage tail protein;protein_id=WP_087949712.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1427443 1427778 . - . ID=gene-LU604_RS07595;Name=LU604_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07595;old_locus_tag=LU604_07595 NZ_CP089942.1 Protein Homology CDS 1427443 1427778 . - 0 ID=cds-WP_016191679.1;Parent=gene-LU604_RS07595;Dbxref=Genbank:WP_016191679.1;Name=WP_016191679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084214.1;locus_tag=LU604_RS07595;product=phage tail assembly protein;protein_id=WP_016191679.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1427907 1428428 . - . ID=gene-LU604_RS07600;Name=LU604_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07600;old_locus_tag=LU604_07600 NZ_CP089942.1 Protein Homology CDS 1427907 1428428 . - 0 ID=cds-WP_016191680.1;Parent=gene-LU604_RS07600;Dbxref=Genbank:WP_016191680.1;Name=WP_016191680.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001062395.1;locus_tag=LU604_RS07600;product=phage major tail tube protein;protein_id=WP_016191680.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1428428 1429855 . - . ID=gene-LU604_RS07605;Name=LU604_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07605;old_locus_tag=LU604_07605 NZ_CP089942.1 Protein Homology CDS 1428428 1429855 . - 0 ID=cds-WP_233480305.1;Parent=gene-LU604_RS07605;Dbxref=Genbank:WP_233480305.1;Name=WP_233480305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001610519.1;locus_tag=LU604_RS07605;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_233480305.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1429845 1430096 . - . ID=gene-LU604_RS07610;Name=LU604_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07610;old_locus_tag=LU604_07610 NZ_CP089942.1 Protein Homology CDS 1429845 1430096 . - 0 ID=cds-WP_198292530.1;Parent=gene-LU604_RS07610;Dbxref=Genbank:WP_198292530.1;Name=WP_198292530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001513985.1;locus_tag=LU604_RS07610;product=hypothetical protein;protein_id=WP_198292530.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1430096 1430560 . - . ID=gene-LU604_RS07615;Name=LU604_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07615;old_locus_tag=LU604_07615 NZ_CP089942.1 Protein Homology CDS 1430096 1430560 . - 0 ID=cds-WP_016191683.1;Parent=gene-LU604_RS07615;Dbxref=Genbank:WP_016191683.1;Name=WP_016191683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191683.1;locus_tag=LU604_RS07615;product=Gp37 family protein;protein_id=WP_016191683.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1430560 1431006 . - . ID=gene-LU604_RS07620;Name=LU604_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07620;old_locus_tag=LU604_07620 NZ_CP089942.1 Protein Homology CDS 1430560 1431006 . - 0 ID=cds-WP_233480306.1;Parent=gene-LU604_RS07620;Dbxref=Genbank:WP_233480306.1;Name=WP_233480306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271671.1;locus_tag=LU604_RS07620;product=DUF1320 domain-containing protein;protein_id=WP_233480306.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1431008 1431364 . - . ID=gene-LU604_RS07625;Name=LU604_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07625;old_locus_tag=LU604_07625 NZ_CP089942.1 Protein Homology CDS 1431008 1431364 . - 0 ID=cds-WP_016191685.1;Parent=gene-LU604_RS07625;Dbxref=Genbank:WP_016191685.1;Name=WP_016191685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191685.1;locus_tag=LU604_RS07625;product=DUF2190 family protein;protein_id=WP_016191685.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1431375 1432328 . - . ID=gene-LU604_RS07630;Name=LU604_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07630;old_locus_tag=LU604_07630 NZ_CP089942.1 Protein Homology CDS 1431375 1432328 . - 0 ID=cds-WP_233480307.1;Parent=gene-LU604_RS07630;Dbxref=Genbank:WP_233480307.1;Name=WP_233480307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803522.1;locus_tag=LU604_RS07630;product=hypothetical protein;protein_id=WP_233480307.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1432342 1433439 . - . ID=gene-LU604_RS07635;Name=LU604_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07635;old_locus_tag=LU604_07635 NZ_CP089942.1 Protein Homology CDS 1432342 1433439 . - 0 ID=cds-WP_016191687.1;Parent=gene-LU604_RS07635;Dbxref=Genbank:WP_016191687.1;Name=WP_016191687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273074.1;locus_tag=LU604_RS07635;product=hypothetical protein;protein_id=WP_016191687.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1433644 1434102 . - . ID=gene-LU604_RS07640;Name=LU604_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07640;old_locus_tag=LU604_07640 NZ_CP089942.1 Protein Homology CDS 1433644 1434102 . - 0 ID=cds-WP_016191688.1;Parent=gene-LU604_RS07640;Dbxref=Genbank:WP_016191688.1;Name=WP_016191688.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000135514.1;locus_tag=LU604_RS07640;product=phage virion morphogenesis protein;protein_id=WP_016191688.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1434105 1434926 . - . ID=gene-LU604_RS07645;Name=LU604_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07645;old_locus_tag=LU604_07645 NZ_CP089942.1 Protein Homology CDS 1434105 1434926 . - 0 ID=cds-WP_233480308.1;Parent=gene-LU604_RS07645;Dbxref=Genbank:WP_233480308.1;Name=WP_233480308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191689.1;locus_tag=LU604_RS07645;product=phage minor head protein;protein_id=WP_233480308.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1434907 1436403 . - . ID=gene-LU604_RS07650;Name=LU604_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07650;old_locus_tag=LU604_07650 NZ_CP089942.1 Protein Homology CDS 1434907 1436403 . - 0 ID=cds-WP_016191690.1;Parent=gene-LU604_RS07650;Dbxref=Genbank:WP_016191690.1;Name=WP_016191690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240624.1;locus_tag=LU604_RS07650;product=DUF935 domain-containing protein;protein_id=WP_016191690.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1436403 1437926 . - . ID=gene-LU604_RS07655;Name=LU604_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07655;old_locus_tag=LU604_07655 NZ_CP089942.1 Protein Homology CDS 1436403 1437926 . - 0 ID=cds-WP_233481547.1;Parent=gene-LU604_RS07655;Dbxref=Genbank:WP_233481547.1;Name=WP_233481547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080258.1;locus_tag=LU604_RS07655;product=hypothetical protein;protein_id=WP_233481547.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1437923 1438468 . - . ID=gene-LU604_RS07660;Name=LU604_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07660;old_locus_tag=LU604_07660 NZ_CP089942.1 Protein Homology CDS 1437923 1438468 . - 0 ID=cds-WP_233480754.1;Parent=gene-LU604_RS07660;Dbxref=Genbank:WP_233480754.1;Name=WP_233480754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001696566.1;locus_tag=LU604_RS07660;product=DUF3486 family protein;protein_id=WP_233480754.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1438468 1438779 . - . ID=gene-LU604_RS07665;Name=LU604_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07665;old_locus_tag=LU604_07665 NZ_CP089942.1 Protein Homology CDS 1438468 1438779 . - 0 ID=cds-WP_233480309.1;Parent=gene-LU604_RS07665;Dbxref=Genbank:WP_233480309.1;Name=WP_233480309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227551.1;locus_tag=LU604_RS07665;product=hypothetical protein;protein_id=WP_233480309.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1438772 1439104 . - . ID=gene-LU604_RS07670;Name=LU604_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07670;old_locus_tag=LU604_07670 NZ_CP089942.1 Protein Homology CDS 1438772 1439104 . - 0 ID=cds-WP_000175096.1;Parent=gene-LU604_RS07670;Dbxref=Genbank:WP_000175096.1;Name=WP_000175096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175096.1;locus_tag=LU604_RS07670;product=hypothetical protein;protein_id=WP_000175096.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1439101 1439754 . - . ID=gene-LU604_RS07675;Name=LU604_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07675;old_locus_tag=LU604_07675 NZ_CP089942.1 Protein Homology CDS 1439101 1439754 . - 0 ID=cds-WP_233480310.1;Parent=gene-LU604_RS07675;Dbxref=Genbank:WP_233480310.1;Name=WP_233480310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000264665.1;locus_tag=LU604_RS07675;product=hypothetical protein;protein_id=WP_233480310.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1439744 1440466 . - . ID=gene-LU604_RS07680;Name=LU604_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07680;old_locus_tag=LU604_07680 NZ_CP089942.1 Protein Homology CDS 1439744 1440466 . - 0 ID=cds-WP_233480311.1;Parent=gene-LU604_RS07680;Dbxref=Genbank:WP_233480311.1;Name=WP_233480311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122431.1;locus_tag=LU604_RS07680;product=transglycosylase SLT domain-containing protein;protein_id=WP_233480311.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1440469 1440819 . - . ID=gene-LU604_RS07685;Name=LU604_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07685;old_locus_tag=LU604_07685 NZ_CP089942.1 Protein Homology CDS 1440469 1440819 . - 0 ID=cds-WP_016191696.1;Parent=gene-LU604_RS07685;Dbxref=Genbank:WP_016191696.1;Name=WP_016191696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365653.1;locus_tag=LU604_RS07685;product=putative holin;protein_id=WP_016191696.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1440950 1441273 . + . ID=gene-LU604_RS07690;Name=LU604_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07690;old_locus_tag=LU604_07690 NZ_CP089942.1 Protein Homology CDS 1440950 1441273 . + 0 ID=cds-WP_071598929.1;Parent=gene-LU604_RS07690;Dbxref=Genbank:WP_071598929.1;Name=WP_071598929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001555974.1;locus_tag=LU604_RS07690;product=hypothetical protein;protein_id=WP_071598929.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1441404 1442444 . + . ID=gene-LU604_RS07695;Name=LU604_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07695;old_locus_tag=LU604_07695 NZ_CP089942.1 Protein Homology CDS 1441404 1442444 . + 0 ID=cds-WP_233478553.1-11;Parent=gene-LU604_RS07695;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS07695;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1442495 1442968 . - . ID=gene-LU604_RS07700;Name=LU604_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07700;old_locus_tag=LU604_07700 NZ_CP089942.1 GeneMarkS-2+ CDS 1442495 1442968 . - 0 ID=cds-WP_233480312.1;Parent=gene-LU604_RS07700;Dbxref=Genbank:WP_233480312.1;Name=WP_233480312.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07700;product=DUF2441 domain-containing protein;protein_id=WP_233480312.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1443212 1443982 . + . ID=gene-LU604_RS07705;Name=LU604_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07705;old_locus_tag=LU604_07705 NZ_CP089942.1 Protein Homology CDS 1443212 1443982 . + 0 ID=cds-WP_233480313.1;Parent=gene-LU604_RS07705;Dbxref=Genbank:WP_233480313.1;Name=WP_233480313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000664222.1;locus_tag=LU604_RS07705;product=DNA adenine methylase;protein_id=WP_233480313.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1444028 1444306 . + . ID=gene-LU604_RS07710;Name=LU604_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07710;old_locus_tag=LU604_07710 NZ_CP089942.1 Protein Homology CDS 1444028 1444306 . + 0 ID=cds-WP_233481548.1;Parent=gene-LU604_RS07710;Dbxref=Genbank:WP_233481548.1;Name=WP_233481548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320255.1;locus_tag=LU604_RS07710;product=hypothetical protein;protein_id=WP_233481548.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1444426 1444818 . - . ID=gene-LU604_RS07715;Name=LU604_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07715;old_locus_tag=LU604_07715 NZ_CP089942.1 Protein Homology CDS 1444426 1444818 . - 0 ID=cds-WP_233480314.1;Parent=gene-LU604_RS07715;Dbxref=Genbank:WP_233480314.1;Name=WP_233480314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808595.1;locus_tag=LU604_RS07715;product=helix-turn-helix domain-containing protein;protein_id=WP_233480314.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1444881 1445069 . + . ID=gene-LU604_RS07720;Name=LU604_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07720;old_locus_tag=LU604_07720 NZ_CP089942.1 Protein Homology CDS 1444881 1445069 . + 0 ID=cds-WP_016191701.1;Parent=gene-LU604_RS07720;Dbxref=Genbank:WP_016191701.1;Name=WP_016191701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001510316.1;locus_tag=LU604_RS07720;product=DNA-binding protein;protein_id=WP_016191701.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1445122 1445427 . + . ID=gene-LU604_RS07725;Name=LU604_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07725;old_locus_tag=LU604_07725 NZ_CP089942.1 Protein Homology CDS 1445122 1445427 . + 0 ID=cds-WP_016191702.1;Parent=gene-LU604_RS07725;Dbxref=Genbank:WP_016191702.1;Name=WP_016191702.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000042842.1;locus_tag=LU604_RS07725;product=helix-turn-helix domain-containing protein;protein_id=WP_016191702.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1445437 1446339 . + . ID=gene-LU604_RS07730;Name=LU604_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07730;old_locus_tag=LU604_07730 NZ_CP089942.1 Protein Homology CDS 1445437 1446339 . + 0 ID=cds-WP_233480315.1;Parent=gene-LU604_RS07730;Dbxref=Genbank:WP_233480315.1;Name=WP_233480315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533825.1;locus_tag=LU604_RS07730;product=DUF3102 domain-containing protein;protein_id=WP_233480315.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1446343 1448112 . + . ID=gene-LU604_RS07735;Name=LU604_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07735;old_locus_tag=LU604_07735 NZ_CP089942.1 Protein Homology CDS 1446343 1448112 . + 0 ID=cds-WP_016191705.1;Parent=gene-LU604_RS07735;Dbxref=Genbank:WP_016191705.1;Name=WP_016191705.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001756569.1;locus_tag=LU604_RS07735;product=DDE-type integrase/transposase/recombinase;protein_id=WP_016191705.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1448123 1449289 . + . ID=gene-LU604_RS07740;Name=LU604_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07740;old_locus_tag=LU604_07740 NZ_CP089942.1 Protein Homology CDS 1448123 1449289 . + 0 ID=cds-WP_233480316.1;Parent=gene-LU604_RS07740;Dbxref=Genbank:WP_233480316.1;Name=WP_233480316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803496.1;locus_tag=LU604_RS07740;product=AAA family ATPase;protein_id=WP_233480316.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1449292 1449564 . + . ID=gene-LU604_RS07745;Name=LU604_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07745;old_locus_tag=LU604_07745 NZ_CP089942.1 Protein Homology CDS 1449292 1449564 . + 0 ID=cds-WP_233480317.1;Parent=gene-LU604_RS07745;Dbxref=Genbank:WP_233480317.1;Name=WP_233480317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009113919.1;locus_tag=LU604_RS07745;product=hypothetical protein;protein_id=WP_233480317.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1449582 1450193 . + . ID=gene-LU604_RS07750;Name=LU604_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07750;old_locus_tag=LU604_07750 NZ_CP089942.1 Protein Homology CDS 1449582 1450193 . + 0 ID=cds-WP_016191707.1;Parent=gene-LU604_RS07750;Dbxref=Genbank:WP_016191707.1;Name=WP_016191707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803510.1;locus_tag=LU604_RS07750;product=DUF3164 family protein;protein_id=WP_016191707.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1450270 1450671 . + . ID=gene-LU604_RS07755;Name=LU604_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07755;old_locus_tag=LU604_07755 NZ_CP089942.1 GeneMarkS-2+ CDS 1450270 1450671 . + 0 ID=cds-WP_233480318.1;Parent=gene-LU604_RS07755;Dbxref=Genbank:WP_233480318.1;Name=WP_233480318.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07755;product=hypothetical protein;protein_id=WP_233480318.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1450674 1450862 . + . ID=gene-LU604_RS07760;Name=LU604_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07760;old_locus_tag=LU604_07760 NZ_CP089942.1 Protein Homology CDS 1450674 1450862 . + 0 ID=cds-WP_016191710.1;Parent=gene-LU604_RS07760;Dbxref=Genbank:WP_016191710.1;Name=WP_016191710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000264906.1;locus_tag=LU604_RS07760;product=hypothetical protein;protein_id=WP_016191710.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1450866 1451558 . + . ID=gene-LU604_RS07765;Name=LU604_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07765;old_locus_tag=LU604_07765 NZ_CP089942.1 Protein Homology CDS 1450866 1451558 . + 0 ID=cds-WP_233480319.1;Parent=gene-LU604_RS07765;Dbxref=Genbank:WP_233480319.1;Name=WP_233480319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118592.1;locus_tag=LU604_RS07765;product=DUF2786 domain-containing protein;protein_id=WP_233480319.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1451555 1451764 . + . ID=gene-LU604_RS07770;Name=LU604_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07770;old_locus_tag=LU604_07770 NZ_CP089942.1 Protein Homology CDS 1451555 1451764 . + 0 ID=cds-WP_016191712.1;Parent=gene-LU604_RS07770;Dbxref=Genbank:WP_016191712.1;Name=WP_016191712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297463.1;locus_tag=LU604_RS07770;product=hypothetical protein;protein_id=WP_016191712.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1451764 1452189 . + . ID=gene-LU604_RS07775;Name=LU604_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07775;old_locus_tag=LU604_07775 NZ_CP089942.1 Protein Homology CDS 1451764 1452189 . + 0 ID=cds-WP_016191713.1;Parent=gene-LU604_RS07775;Dbxref=Genbank:WP_016191713.1;Name=WP_016191713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118590.1;locus_tag=LU604_RS07775;product=regulatory protein GemA;protein_id=WP_016191713.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1452186 1452575 . + . ID=gene-LU604_RS07780;Name=LU604_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07780;old_locus_tag=LU604_07780 NZ_CP089942.1 Protein Homology CDS 1452186 1452575 . + 0 ID=cds-WP_016191714.1;Parent=gene-LU604_RS07780;Dbxref=Genbank:WP_016191714.1;Name=WP_016191714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001281697.1;locus_tag=LU604_RS07780;product=phage transcriptional regulator;protein_id=WP_016191714.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1452731 1453164 . + . ID=gene-LU604_RS07785;Name=LU604_RS07785;end_range=1453164,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07785;old_locus_tag=LU604_07785;partial=true;pseudo=true;start_range=.,1452731 NZ_CP089942.1 Protein Homology CDS 1452731 1453164 . + 0 ID=cds-LU604_RS07785;Parent=gene-LU604_RS07785;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1453164,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416844.1;locus_tag=LU604_RS07785;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1452731;transl_table=11 NZ_CP089942.1 RefSeq gene 1453236 1453424 . + . ID=gene-LU604_RS07790;Name=LU604_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07790;old_locus_tag=LU604_07790 NZ_CP089942.1 Protein Homology CDS 1453236 1453424 . + 0 ID=cds-WP_233480320.1;Parent=gene-LU604_RS07790;Dbxref=Genbank:WP_233480320.1;Name=WP_233480320.1;Ontology_term=GO:0006631,GO:0016491,GO:0016616;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: protein motif:HMM:NF012928.2;locus_tag=LU604_RS07790;product=3-hydroxyacyl-CoA dehydrogenase family protein;protein_id=WP_233480320.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1453547 1453765 . + . ID=gene-LU604_RS07795;Name=LU604_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07795;old_locus_tag=LU604_07795 NZ_CP089942.1 GeneMarkS-2+ CDS 1453547 1453765 . + 0 ID=cds-WP_233481549.1;Parent=gene-LU604_RS07795;Dbxref=Genbank:WP_233481549.1;Name=WP_233481549.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07795;product=hypothetical protein;protein_id=WP_233481549.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1454053 1454535 . + . ID=gene-LU604_RS07800;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=LU604_RS07800;old_locus_tag=LU604_07800 NZ_CP089942.1 Protein Homology CDS 1454053 1454535 . + 0 ID=cds-WP_016190047.1;Parent=gene-LU604_RS07800;Dbxref=Genbank:WP_016190047.1;Name=WP_016190047.1;Ontology_term=GO:0000160,GO:0101006;gbkey=CDS;gene=sixA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009088942.1;locus_tag=LU604_RS07800;product=phosphohistidine phosphatase SixA;protein_id=WP_016190047.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1454570 1455121 . - . ID=gene-LU604_RS07805;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=LU604_RS07805;old_locus_tag=LU604_07805 NZ_CP089942.1 Protein Homology CDS 1454570 1455121 . - 0 ID=cds-WP_016190046.1;Parent=gene-LU604_RS07805;Dbxref=Genbank:WP_016190046.1;Name=WP_016190046.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416834.1;locus_tag=LU604_RS07805;product=endonuclease SmrB;protein_id=WP_016190046.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1455293 1456225 . + . ID=gene-LU604_RS07810;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=LU604_RS07810;old_locus_tag=LU604_07810 NZ_CP089942.1 Protein Homology CDS 1455293 1456225 . + 0 ID=cds-WP_233480322.1;Parent=gene-LU604_RS07810;Dbxref=Genbank:WP_233480322.1;Name=WP_233480322.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=LU604_RS07810;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_233480322.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1456396 1457481 . + . ID=gene-LU604_RS07815;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=LU604_RS07815;old_locus_tag=LU604_07815 NZ_CP089942.1 Protein Homology CDS 1456396 1457481 . + 0 ID=cds-WP_016190044.1;Parent=gene-LU604_RS07815;Dbxref=Genbank:WP_016190044.1;Name=WP_016190044.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311240.1;locus_tag=LU604_RS07815;product=chorismate synthase;protein_id=WP_016190044.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1457492 1458296 . + . ID=gene-LU604_RS07820;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=pseudogene;locus_tag=LU604_RS07820;old_locus_tag=LU604_07820;pseudo=true NZ_CP089942.1 Protein Homology CDS 1457492 1458296 . + 0 ID=cds-LU604_RS07820;Parent=gene-LU604_RS07820;Note=frameshifted%3B internal stop;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750422.1;locus_tag=LU604_RS07820;product=penicillin-insensitive murein endopeptidase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1458328 1459131 . + . ID=gene-LU604_RS07825;Name=LU604_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07825;old_locus_tag=LU604_07825 NZ_CP089942.1 Protein Homology CDS 1458328 1459131 . + 0 ID=cds-WP_233480323.1;Parent=gene-LU604_RS07825;Dbxref=Genbank:WP_233480323.1;Name=WP_233480323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190043.1;locus_tag=LU604_RS07825;product=sulfite exporter TauE/SafE family protein;protein_id=WP_233480323.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1459180 1459725 . + . ID=gene-LU604_RS07830;Name=LU604_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07830;old_locus_tag=LU604_07830 NZ_CP089942.1 Protein Homology CDS 1459180 1459725 . + 0 ID=cds-WP_016190042.1;Parent=gene-LU604_RS07830;Dbxref=Genbank:WP_016190042.1;Name=WP_016190042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007889222.1;locus_tag=LU604_RS07830;product=elongation factor P hydroxylase;protein_id=WP_016190042.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1459756 1460037 . + . ID=gene-LU604_RS07835;Name=LU604_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07835;old_locus_tag=LU604_07835 NZ_CP089942.1 Protein Homology CDS 1459756 1460037 . + 0 ID=cds-WP_016190041.1;Parent=gene-LU604_RS07835;Dbxref=Genbank:WP_016190041.1;Name=WP_016190041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203145.1;locus_tag=LU604_RS07835;product=YfcL family protein;protein_id=WP_016190041.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1460087 1462087 . - . ID=gene-LU604_RS07840;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=LU604_RS07840;old_locus_tag=LU604_07840 NZ_CP089942.1 Protein Homology CDS 1460087 1462087 . - 0 ID=cds-WP_233481550.1;Parent=gene-LU604_RS07840;Dbxref=Genbank:WP_233481550.1;Name=WP_233481550.1;gbkey=CDS;gene=mnmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190040.1;locus_tag=LU604_RS07840;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_233481550.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1462243 1463466 . + . ID=gene-LU604_RS07845;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=LU604_RS07845;old_locus_tag=LU604_07845 NZ_CP089942.1 Protein Homology CDS 1462243 1463466 . + 0 ID=cds-WP_016190039.1;Parent=gene-LU604_RS07845;Dbxref=Genbank:WP_016190039.1;Name=WP_016190039.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203143.1;locus_tag=LU604_RS07845;product=beta-ketoacyl-ACP synthase I;protein_id=WP_016190039.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1464009 1465043 . - . ID=gene-LU604_RS07850;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=LU604_RS07850;old_locus_tag=LU604_07850 NZ_CP089942.1 Protein Homology CDS 1464009 1465043 . - 0 ID=cds-WP_233480324.1;Parent=gene-LU604_RS07850;Dbxref=Genbank:WP_233480324.1;Name=WP_233480324.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170378.1;locus_tag=LU604_RS07850;product=flagella biosynthesis regulator Flk;protein_id=WP_233480324.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1465712 1466824 . + . ID=gene-LU604_RS07855;Name=LU604_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07855;old_locus_tag=LU604_07855 NZ_CP089942.1 Protein Homology CDS 1465712 1466824 . + 0 ID=cds-WP_152664273.1;Parent=gene-LU604_RS07855;Dbxref=Genbank:WP_152664273.1;Name=WP_152664273.1;Ontology_term=GO:0046983;gbkey=CDS;go_function=protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203129.1;locus_tag=LU604_RS07855;product=DUF3410 domain-containing protein;protein_id=WP_152664273.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1466934 1467944 . + . ID=gene-LU604_RS07860;Name=LU604_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07860;old_locus_tag=LU604_07860 NZ_CP089942.1 Protein Homology CDS 1466934 1467944 . + 0 ID=cds-WP_016190036.1;Parent=gene-LU604_RS07860;Dbxref=Genbank:WP_016190036.1;Name=WP_016190036.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667557.1;locus_tag=LU604_RS07860;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_016190036.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1467944 1468759 . + . ID=gene-LU604_RS07865;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=LU604_RS07865;old_locus_tag=LU604_07865 NZ_CP089942.1 Protein Homology CDS 1467944 1468759 . + 0 ID=cds-WP_016190035.1;Parent=gene-LU604_RS07865;Dbxref=Genbank:WP_016190035.1;Name=WP_016190035.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311229.1;locus_tag=LU604_RS07865;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_016190035.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1468789 1469448 . + . ID=gene-LU604_RS07870;Name=LU604_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07870;old_locus_tag=LU604_07870 NZ_CP089942.1 Protein Homology CDS 1468789 1469448 . + 0 ID=cds-WP_233480325.1;Parent=gene-LU604_RS07870;Dbxref=Genbank:WP_233480325.1;Name=WP_233480325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190034.1;locus_tag=LU604_RS07870;product=DedA family protein;protein_id=WP_233480325.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1469733 1470275 . - . ID=gene-LU604_RS07875;Name=LU604_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07875;old_locus_tag=LU604_07875 NZ_CP089942.1 Protein Homology CDS 1469733 1470275 . - 0 ID=cds-WP_016190033.1;Parent=gene-LU604_RS07875;Dbxref=Genbank:WP_016190033.1;Name=WP_016190033.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544635.1;locus_tag=LU604_RS07875;product=chorismate mutase;protein_id=WP_016190033.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1470635 1472059 . + . ID=gene-LU604_RS07880;Name=LU604_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07880;old_locus_tag=LU604_07880 NZ_CP089942.1 GeneMarkS-2+ CDS 1470635 1472059 . + 0 ID=cds-WP_233480326.1;Parent=gene-LU604_RS07880;Dbxref=Genbank:WP_233480326.1;Name=WP_233480326.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS07880;product=hypothetical protein;protein_id=WP_233480326.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1472348 1473262 . + . ID=gene-LU604_RS07885;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=LU604_RS07885;old_locus_tag=LU604_07885 NZ_CP089942.1 Protein Homology CDS 1472348 1473262 . + 0 ID=cds-WP_016190031.1;Parent=gene-LU604_RS07885;Dbxref=Genbank:WP_016190031.1;Name=WP_016190031.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803398.1;locus_tag=LU604_RS07885;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_016190031.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1473327 1474589 . + . ID=gene-LU604_RS07890;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=LU604_RS07890;old_locus_tag=LU604_07890 NZ_CP089942.1 Protein Homology CDS 1473327 1474589 . + 0 ID=cds-WP_016190030.1;Parent=gene-LU604_RS07890;Dbxref=Genbank:WP_016190030.1;Name=WP_016190030.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170367.1;locus_tag=LU604_RS07890;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_016190030.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1474579 1475313 . + . ID=gene-LU604_RS07895;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=LU604_RS07895;old_locus_tag=LU604_07895 NZ_CP089942.1 Protein Homology CDS 1474579 1475313 . + 0 ID=cds-WP_233480327.1;Parent=gene-LU604_RS07895;Dbxref=Genbank:WP_233480327.1;Name=WP_233480327.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854266.1;locus_tag=LU604_RS07895;product=cell division protein DedD;protein_id=WP_233480327.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1475751 1476224 . + . ID=gene-LU604_RS07900;Name=cvpA;end_range=1476224,.;gbkey=Gene;gene=cvpA;gene_biotype=pseudogene;locus_tag=LU604_RS07900;old_locus_tag=LU604_07900;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1475751 1476224 . + 0 ID=cds-LU604_RS07900;Parent=gene-LU604_RS07900;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1476224,.;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020454555.1;locus_tag=LU604_RS07900;partial=true;product=colicin V production protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1476275 1477792 . + . ID=gene-LU604_RS07905;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=LU604_RS07905;old_locus_tag=LU604_07905 NZ_CP089942.1 Protein Homology CDS 1476275 1477792 . + 0 ID=cds-WP_016190027.1;Parent=gene-LU604_RS07905;Dbxref=Genbank:WP_016190027.1;Name=WP_016190027.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=LU604_RS07905;product=amidophosphoribosyltransferase;protein_id=WP_016190027.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1477889 1478458 . + . ID=gene-LU604_RS07910;Name=LU604_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07910;old_locus_tag=LU604_07910 NZ_CP089942.1 Protein Homology CDS 1477889 1478458 . + 0 ID=cds-WP_016190026.1;Parent=gene-LU604_RS07910;Dbxref=Genbank:WP_016190026.1;Name=WP_016190026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228070.1;locus_tag=LU604_RS07910;product=UbiX family flavin prenyltransferase;protein_id=WP_016190026.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1478496 1478886 . + . ID=gene-LU604_RS07915;Name=LU604_RS07915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07915;old_locus_tag=LU604_07915;partial=true;pseudo=true;start_range=.,1478496 NZ_CP089942.1 Protein Homology CDS 1478496 1478886 . + 0 ID=cds-LU604_RS07915;Parent=gene-LU604_RS07915;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209738.1;locus_tag=LU604_RS07915;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;start_range=.,1478496;transl_table=11 NZ_CP089942.1 RefSeq gene 1479206 1480099 . - . ID=gene-LU604_RS07920;Name=LU604_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07920;old_locus_tag=LU604_07920 NZ_CP089942.1 Protein Homology CDS 1479206 1480099 . - 0 ID=cds-WP_233480328.1;Parent=gene-LU604_RS07920;Dbxref=Genbank:WP_233480328.1;Name=WP_233480328.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190022.1;locus_tag=LU604_RS07920;product=TIGR01777 family oxidoreductase;protein_id=WP_233480328.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1480326 1480973 . + . ID=gene-LU604_RS07925;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=LU604_RS07925;old_locus_tag=LU604_07925 NZ_CP089942.1 Protein Homology CDS 1480326 1480973 . + 0 ID=cds-WP_016190021.1;Parent=gene-LU604_RS07925;Dbxref=Genbank:WP_016190021.1;Name=WP_016190021.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440928.1;locus_tag=LU604_RS07925;product=glutathione transferase;protein_id=WP_016190021.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1481068 1481610 . + . ID=gene-LU604_RS07930;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=LU604_RS07930;old_locus_tag=LU604_07930 NZ_CP089942.1 Protein Homology CDS 1481068 1481610 . + 0 ID=cds-WP_016190020.1;Parent=gene-LU604_RS07930;Dbxref=Genbank:WP_016190020.1;Name=WP_016190020.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010616065.1;locus_tag=LU604_RS07930;product=NUDIX hydrolase YfcD;protein_id=WP_016190020.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1481681 1482378 . + . ID=gene-LU604_RS07935;Name=LU604_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07935;old_locus_tag=LU604_07935 NZ_CP089942.1 Protein Homology CDS 1481681 1481942 . + 0 ID=cds-WP_233480329.1;Parent=gene-LU604_RS07935;Dbxref=Genbank:WP_233480329.1;Name=WP_233480329.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS07935;product=IS1 family transposase;protein_id=WP_233480329.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 1481942 1482378 . + 2 ID=cds-WP_233480329.1;Parent=gene-LU604_RS07935;Dbxref=Genbank:WP_233480329.1;Name=WP_233480329.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS07935;product=IS1 family transposase;protein_id=WP_233480329.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1482395 1482910 . + . ID=gene-LU604_RS07940;Name=LU604_RS07940;end_range=1482910,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07940;old_locus_tag=LU604_07940;partial=true;pseudo=true;start_range=.,1482395 NZ_CP089942.1 Protein Homology CDS 1482395 1482910 . + 0 ID=cds-LU604_RS07940;Parent=gene-LU604_RS07940;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0005524;end_range=1482910,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192780.1;locus_tag=LU604_RS07940;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;start_range=.,1482395;transl_table=11 NZ_CP089942.1 RefSeq gene 1483120 1483659 . - . ID=gene-LU604_RS26945;Name=LU604_RS26945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26945 NZ_CP089942.1 Protein Homology CDS 1483120 1483659 . - 0 ID=cds-WP_252120242.1;Parent=gene-LU604_RS26945;Dbxref=Genbank:WP_252120242.1;Name=WP_252120242.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS26945;product=transposase;protein_id=WP_252120242.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1483784 1484335 . - . ID=gene-LU604_RS26950;Name=LU604_RS26950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS26950;partial=true;pseudo=true;start_range=.,1483784 NZ_CP089942.1 Protein Homology CDS 1483784 1484335 . - 0 ID=cds-LU604_RS26950;Parent=gene-LU604_RS26950;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025677.2;locus_tag=LU604_RS26950;partial=true;product=transposase zinc-binding domain-containing protein;pseudo=true;start_range=.,1483784;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1484661 1485600 . + . ID=gene-LU604_RS07950;Name=kop;gbkey=Gene;gene=kop;gene_biotype=pseudogene;locus_tag=LU604_RS07950;old_locus_tag=LU604_07950;pseudo=true NZ_CP089942.1 Protein Homology CDS 1484661 1485600 . + 0 ID=cds-LU604_RS07950;Parent=gene-LU604_RS07950;Note=frameshifted;gbkey=CDS;gene=kop;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026564.1;locus_tag=LU604_RS07950;product=omptin family outer membrane protease Kop;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1486142 1486450 . + . ID=gene-LU604_RS07955;Name=LU604_RS07955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS07955;old_locus_tag=LU604_07955;partial=true;pseudo=true;start_range=.,1486142 NZ_CP089942.1 Protein Homology CDS 1486142 1486450 . + 0 ID=cds-LU604_RS07955;Parent=gene-LU604_RS07955;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0005524,GO:0022857,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004173026.1;locus_tag=LU604_RS07955;partial=true;product=TOBE domain-containing protein;pseudo=true;start_range=.,1486142;transl_table=11 NZ_CP089942.1 RefSeq gene 1486502 1488649 . - . ID=gene-LU604_RS07960;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=LU604_RS07960;old_locus_tag=LU604_07960 NZ_CP089942.1 Protein Homology CDS 1486502 1488649 . - 0 ID=cds-WP_016190016.1;Parent=gene-LU604_RS07960;Dbxref=Genbank:WP_016190016.1;Name=WP_016190016.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013034886.1;locus_tag=LU604_RS07960;product=phosphate acetyltransferase;protein_id=WP_016190016.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1488829 1490031 . - . ID=gene-LU604_RS07965;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=LU604_RS07965;old_locus_tag=LU604_07965 NZ_CP089942.1 Protein Homology CDS 1488829 1490031 . - 0 ID=cds-WP_016190015.1;Parent=gene-LU604_RS07965;Dbxref=Genbank:WP_016190015.1;Name=WP_016190015.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=LU604_RS07965;product=acetate kinase;protein_id=WP_016190015.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1490348 1490800 . + . ID=gene-LU604_RS07970;Name=LU604_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07970;old_locus_tag=LU604_07970 NZ_CP089942.1 Protein Homology CDS 1490348 1490800 . + 0 ID=cds-WP_233480330.1;Parent=gene-LU604_RS07970;Dbxref=Genbank:WP_233480330.1;Name=WP_233480330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000106627.1;locus_tag=LU604_RS07970;product=DUF412 domain-containing protein;protein_id=WP_233480330.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1490945 1491439 . + . ID=gene-LU604_RS07975;Name=LU604_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07975;old_locus_tag=LU604_07975 NZ_CP089942.1 Protein Homology CDS 1490945 1491439 . + 0 ID=cds-WP_016190013.1;Parent=gene-LU604_RS07975;Dbxref=Genbank:WP_016190013.1;Name=WP_016190013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416797.2;locus_tag=LU604_RS07975;product=YfbU family protein;protein_id=WP_016190013.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1491454 1492113 . + . ID=gene-LU604_RS07980;Name=LU604_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07980;old_locus_tag=LU604_07980 NZ_CP089942.1 Protein Homology CDS 1491454 1492113 . + 0 ID=cds-WP_016190012.1;Parent=gene-LU604_RS07980;Dbxref=Genbank:WP_016190012.1;Name=WP_016190012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158630.1;locus_tag=LU604_RS07980;product=sugar phosphatase;protein_id=WP_016190012.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1492191 1494023 . + . ID=gene-LU604_RS07985;Name=LU604_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07985;old_locus_tag=LU604_07985 NZ_CP089942.1 Protein Homology CDS 1492191 1494023 . + 0 ID=cds-WP_016190011.1;Parent=gene-LU604_RS07985;Dbxref=Genbank:WP_016190011.1;Name=WP_016190011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004705537.1;locus_tag=LU604_RS07985;product=SLC13 family permease;protein_id=WP_016190011.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1494028 1494624 . - . ID=gene-LU604_RS07990;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=LU604_RS07990;old_locus_tag=LU604_07990 NZ_CP089942.1 Protein Homology CDS 1494028 1494624 . - 0 ID=cds-WP_016190010.1;Parent=gene-LU604_RS07990;Dbxref=Genbank:WP_016190010.1;Name=WP_016190010.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158619.1;locus_tag=LU604_RS07990;product=5'-deoxynucleotidase;protein_id=WP_016190010.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1494746 1495960 . - . ID=gene-LU604_RS07995;Name=LU604_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS07995;old_locus_tag=LU604_07995 NZ_CP089942.1 Protein Homology CDS 1494746 1495960 . - 0 ID=cds-WP_016190009.1;Parent=gene-LU604_RS07995;Dbxref=Genbank:WP_016190009.1;Name=WP_016190009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371084.1;locus_tag=LU604_RS07995;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_016190009.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1496811 1497737 . + . ID=gene-LU604_RS08000;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=LU604_RS08000;old_locus_tag=LU604_08000 NZ_CP089942.1 Protein Homology CDS 1496811 1497737 . + 0 ID=cds-WP_233480331.1;Parent=gene-LU604_RS08000;Dbxref=Genbank:WP_233480331.1;Name=WP_233480331.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190008.1;locus_tag=LU604_RS08000;product=transcriptional regulator LrhA;protein_id=WP_233480331.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1498399 1498836 . + . ID=gene-LU604_RS08005;Name=LU604_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08005;old_locus_tag=LU604_08005 NZ_CP089942.1 Protein Homology CDS 1498399 1498836 . + 0 ID=cds-WP_233480332.1;Parent=gene-LU604_RS08005;Dbxref=Genbank:WP_233480332.1;Name=WP_233480332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158614.1;locus_tag=LU604_RS08005;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_233480332.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1498852 1499526 . + . ID=gene-LU604_RS08010;Name=LU604_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08010;old_locus_tag=LU604_08010 NZ_CP089942.1 Protein Homology CDS 1498852 1499526 . + 0 ID=cds-WP_016190006.1;Parent=gene-LU604_RS08010;Dbxref=Genbank:WP_016190006.1;Name=WP_016190006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228044.1;locus_tag=LU604_RS08010;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_016190006.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1499633 1501432 . + . ID=gene-LU604_RS08015;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=LU604_RS08015;old_locus_tag=LU604_08015 NZ_CP089942.1 Protein Homology CDS 1499633 1501432 . + 0 ID=cds-WP_016190005.1;Parent=gene-LU604_RS08015;Dbxref=Genbank:WP_016190005.1;Name=WP_016190005.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007716039.1;locus_tag=LU604_RS08015;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_016190005.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1501435 1501950 . + . ID=gene-LU604_RS08020;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=LU604_RS08020;old_locus_tag=LU604_08020 NZ_CP089942.1 Protein Homology CDS 1501435 1501950 . + 0 ID=cds-WP_233480333.1;Parent=gene-LU604_RS08020;Dbxref=Genbank:WP_233480333.1;Name=WP_233480333.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544718.1;locus_tag=LU604_RS08020;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_233480333.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1501947 1503293 . + . ID=gene-LU604_RS08025;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=LU604_RS08025;old_locus_tag=LU604_08025 NZ_CP089942.1 Protein Homology CDS 1501947 1503293 . + 0 ID=cds-WP_016190003.1;Parent=gene-LU604_RS08025;Dbxref=Genbank:WP_016190003.1;Name=WP_016190003.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015699848.1;locus_tag=LU604_RS08025;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_016190003.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1503408 1506134 . + . ID=gene-LU604_RS08030;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=LU604_RS08030;old_locus_tag=LU604_08030 NZ_CP089942.1 Protein Homology CDS 1503408 1506134 . + 0 ID=cds-WP_233480334.1;Parent=gene-LU604_RS08030;Dbxref=Genbank:WP_233480334.1;Name=WP_233480334.1;Ontology_term=GO:0006120,GO:0050136;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015699849.1;locus_tag=LU604_RS08030;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_233480334.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1506131 1507108 . + . ID=gene-LU604_RS08035;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=LU604_RS08035;old_locus_tag=LU604_08035 NZ_CP089942.1 Protein Homology CDS 1506131 1507108 . + 0 ID=cds-WP_016190001.1;Parent=gene-LU604_RS08035;Dbxref=Genbank:WP_016190001.1;Name=WP_016190001.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=LU604_RS08035;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_016190001.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1507122 1507664 . + . ID=gene-LU604_RS08040;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=LU604_RS08040;old_locus_tag=LU604_08040 NZ_CP089942.1 Protein Homology CDS 1507122 1507664 . + 0 ID=cds-WP_016190000.1;Parent=gene-LU604_RS08040;Dbxref=Genbank:WP_016190000.1;Name=WP_016190000.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461263.1;locus_tag=LU604_RS08040;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_016190000.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1507675 1508223 . + . ID=gene-LU604_RS08045;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=LU604_RS08045;old_locus_tag=LU604_08045 NZ_CP089942.1 Protein Homology CDS 1507675 1508223 . + 0 ID=cds-WP_233480335.1;Parent=gene-LU604_RS08045;Dbxref=Genbank:WP_233480335.1;Name=WP_233480335.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158590.1;locus_tag=LU604_RS08045;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_233480335.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1508220 1508522 . + . ID=gene-LU604_RS08050;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=LU604_RS08050;old_locus_tag=LU604_08050 NZ_CP089942.1 Protein Homology CDS 1508220 1508522 . + 0 ID=cds-WP_233480336.1;Parent=gene-LU604_RS08050;Dbxref=Genbank:WP_233480336.1;Name=WP_233480336.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=LU604_RS08050;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_233480336.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1508519 1510357 . + . ID=gene-LU604_RS08055;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=LU604_RS08055;old_locus_tag=LU604_08055 NZ_CP089942.1 Protein Homology CDS 1508519 1510357 . + 0 ID=cds-WP_233480337.1;Parent=gene-LU604_RS08055;Dbxref=Genbank:WP_233480337.1;Name=WP_233480337.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015699850.1;locus_tag=LU604_RS08055;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_233480337.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1510578 1512098 . + . ID=gene-LU604_RS08060;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=LU604_RS08060;old_locus_tag=LU604_08060 NZ_CP089942.1 Protein Homology CDS 1510578 1512098 . + 0 ID=cds-WP_016189996.1;Parent=gene-LU604_RS08060;Dbxref=Genbank:WP_016189996.1;Name=WP_016189996.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=LU604_RS08060;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_016189996.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1512105 1513562 . + . ID=gene-LU604_RS08065;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=LU604_RS08065;old_locus_tag=LU604_08065 NZ_CP089942.1 Protein Homology CDS 1512105 1513562 . + 0 ID=cds-WP_016189995.1;Parent=gene-LU604_RS08065;Dbxref=Genbank:WP_016189995.1;Name=WP_016189995.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013026503.1;locus_tag=LU604_RS08065;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_016189995.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1513797 1514003 . + . ID=gene-LU604_RS08070;Name=LU604_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08070;old_locus_tag=LU604_08070 NZ_CP089942.1 GeneMarkS-2+ CDS 1513797 1514003 . + 0 ID=cds-WP_016189994.1;Parent=gene-LU604_RS08070;Dbxref=Genbank:WP_016189994.1;Name=WP_016189994.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08070;product=hypothetical protein;protein_id=WP_016189994.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1514288 1515940 . - . ID=gene-LU604_RS08075;Name=LU604_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08075;old_locus_tag=LU604_08075 NZ_CP089942.1 Protein Homology CDS 1514288 1515940 . - 0 ID=cds-WP_040465407.1;Parent=gene-LU604_RS08075;Dbxref=Genbank:WP_040465407.1;Name=WP_040465407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008105127.1;locus_tag=LU604_RS08075;product=glucan biosynthesis protein D;protein_id=WP_040465407.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1516150 1516404 . - . ID=gene-LU604_RS08080;Name=LU604_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08080;old_locus_tag=LU604_08080 NZ_CP089942.1 GeneMarkS-2+ CDS 1516150 1516404 . - 0 ID=cds-WP_233480338.1;Parent=gene-LU604_RS08080;Dbxref=Genbank:WP_233480338.1;Name=WP_233480338.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08080;product=hypothetical protein;protein_id=WP_233480338.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1516370 1516681 . - . ID=gene-LU604_RS08085;Name=LU604_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08085;old_locus_tag=LU604_08085 NZ_CP089942.1 Protein Homology CDS 1516370 1516681 . - 0 ID=cds-WP_051124329.1;Parent=gene-LU604_RS08085;Dbxref=Genbank:WP_051124329.1;Name=WP_051124329.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=LU604_RS08085;product=LysR substrate-binding domain-containing protein;protein_id=WP_051124329.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1516959 1517495 . + . ID=gene-LU604_RS08090;Name=LU604_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08090;old_locus_tag=LU604_08090 NZ_CP089942.1 GeneMarkS-2+ CDS 1516959 1517495 . + 0 ID=cds-WP_232426807.1;Parent=gene-LU604_RS08090;Dbxref=Genbank:WP_232426807.1;Name=WP_232426807.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08090;product=hypothetical protein;protein_id=WP_232426807.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1517707 1518747 . - . ID=gene-LU604_RS08095;Name=LU604_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08095;old_locus_tag=LU604_08095 NZ_CP089942.1 Protein Homology CDS 1517707 1518747 . - 0 ID=cds-WP_233478553.1-12;Parent=gene-LU604_RS08095;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS08095;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1519166 1519711 . + . ID=gene-LU604_RS08100;Name=LU604_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08100;old_locus_tag=LU604_08100 NZ_CP089942.1 Protein Homology CDS 1519166 1519711 . + 0 ID=cds-WP_233480341.1;Parent=gene-LU604_RS08100;Dbxref=Genbank:WP_233480341.1;Name=WP_233480341.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021627.2;locus_tag=LU604_RS08100;product=phage protease;protein_id=WP_233480341.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1519704 1519853 . + . ID=gene-LU604_RS08105;Name=LU604_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08105;old_locus_tag=LU604_08105 NZ_CP089942.1 GeneMarkS-2+ CDS 1519704 1519853 . + 0 ID=cds-WP_233480342.1;Parent=gene-LU604_RS08105;Dbxref=Genbank:WP_233480342.1;Name=WP_233480342.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08105;product=hypothetical protein;protein_id=WP_233480342.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1519813 1520469 . + . ID=gene-LU604_RS08110;Name=LU604_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08110;old_locus_tag=LU604_08110 NZ_CP089942.1 GeneMarkS-2+ CDS 1519813 1520469 . + 0 ID=cds-WP_233480343.1;Parent=gene-LU604_RS08110;Dbxref=Genbank:WP_233480343.1;Name=WP_233480343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08110;product=phage protease;protein_id=WP_233480343.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1520675 1521541 . + . ID=gene-LU604_RS08115;Name=LU604_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08115;old_locus_tag=LU604_08115 NZ_CP089942.1 Protein Homology CDS 1520675 1521541 . + 0 ID=cds-WP_233481551.1;Parent=gene-LU604_RS08115;Dbxref=Genbank:WP_233481551.1;Name=WP_233481551.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027224.2;locus_tag=LU604_RS08115;product=BNR-4 repeat-containing protein;protein_id=WP_233481551.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1521571 1521699 . - . ID=gene-LU604_RS08120;Name=LU604_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08120;old_locus_tag=LU604_08120 NZ_CP089942.1 Protein Homology CDS 1521571 1521699 . - 0 ID=cds-WP_232426827.1;Parent=gene-LU604_RS08120;Dbxref=Genbank:WP_232426827.1;Name=WP_232426827.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012354.2;locus_tag=LU604_RS08120;product=LysR family transcriptional regulator;protein_id=WP_232426827.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1521734 1521907 . + . ID=gene-LU604_RS08125;Name=LU604_RS08125;end_range=1521907,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08125;old_locus_tag=LU604_08125;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1521734 1521907 . + 0 ID=cds-LU604_RS08125;Parent=gene-LU604_RS08125;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1521907,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002553320.1;locus_tag=LU604_RS08125;partial=true;product=glyoxalase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1522010 1522435 . - . ID=gene-LU604_RS08130;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS08130;old_locus_tag=LU604_08130;pseudo=true NZ_CP089942.1 Protein Homology CDS 1522010 1522435 . - 0 ID=cds-LU604_RS08130;Parent=gene-LU604_RS08130;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190995.1;locus_tag=LU604_RS08130;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1522556 1522792 . + . ID=gene-LU604_RS08135;Name=LU604_RS08135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08135;old_locus_tag=LU604_08135;partial=true;pseudo=true;start_range=.,1522556 NZ_CP089942.1 Protein Homology CDS 1522556 1522792 . + 0 ID=cds-LU604_RS08135;Parent=gene-LU604_RS08135;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002553320.1;locus_tag=LU604_RS08135;partial=true;product=glyoxalase;pseudo=true;start_range=.,1522556;transl_table=11 NZ_CP089942.1 RefSeq gene 1522983 1523294 . + . ID=gene-LU604_RS08140;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=LU604_RS08140;old_locus_tag=LU604_08140 NZ_CP089942.1 Protein Homology CDS 1522983 1523294 . + 0 ID=cds-WP_016189981.1;Parent=gene-LU604_RS08140;Dbxref=Genbank:WP_016189981.1;Name=WP_016189981.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388266.1;locus_tag=LU604_RS08140;product=stress response protein ElaB;protein_id=WP_016189981.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1523627 1525288 . + . ID=gene-LU604_RS08145;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=LU604_RS08145;old_locus_tag=LU604_08145 NZ_CP089942.1 Protein Homology CDS 1523627 1525288 . + 0 ID=cds-WP_233480345.1;Parent=gene-LU604_RS08145;Dbxref=Genbank:WP_233480345.1;Name=WP_233480345.1;Ontology_term=GO:0009234,GO:0070204;gbkey=CDS;gene=menD;go_function=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189980.1;locus_tag=LU604_RS08145;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_233480345.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1525285 1526049 . + . ID=gene-LU604_RS08150;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=LU604_RS08150;old_locus_tag=LU604_08150 NZ_CP089942.1 Protein Homology CDS 1525285 1526049 . + 0 ID=cds-WP_016189979.1;Parent=gene-LU604_RS08150;Dbxref=Genbank:WP_016189979.1;Name=WP_016189979.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203067.1;locus_tag=LU604_RS08150;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_016189979.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1526059 1526916 . + . ID=gene-LU604_RS08155;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=LU604_RS08155;old_locus_tag=LU604_08155 NZ_CP089942.1 Protein Homology CDS 1526059 1526916 . + 0 ID=cds-WP_016189978.1;Parent=gene-LU604_RS08155;Dbxref=Genbank:WP_016189978.1;Name=WP_016189978.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228027.1;locus_tag=LU604_RS08155;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_016189978.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1526916 1527887 . + . ID=gene-LU604_RS08160;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=LU604_RS08160;old_locus_tag=LU604_08160 NZ_CP089942.1 Protein Homology CDS 1526916 1527887 . + 0 ID=cds-WP_040465403.1;Parent=gene-LU604_RS08160;Dbxref=Genbank:WP_040465403.1;Name=WP_040465403.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203065.1;locus_tag=LU604_RS08160;product=o-succinylbenzoate synthase;protein_id=WP_040465403.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1527875 1529245 . + . ID=gene-LU604_RS08165;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=LU604_RS08165;old_locus_tag=LU604_08165 NZ_CP089942.1 Protein Homology CDS 1527875 1529245 . + 0 ID=cds-WP_233480346.1;Parent=gene-LU604_RS08165;Dbxref=Genbank:WP_233480346.1;Name=WP_233480346.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189976.1;locus_tag=LU604_RS08165;product=o-succinylbenzoate--CoA ligase;protein_id=WP_233480346.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1529531 1530736 . + . ID=gene-LU604_RS08170;Name=LU604_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08170;old_locus_tag=LU604_08170 NZ_CP089942.1 Protein Homology CDS 1529531 1530736 . + 0 ID=cds-WP_016189975.1;Parent=gene-LU604_RS08170;Dbxref=Genbank:WP_016189975.1;Name=WP_016189975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358565.1;locus_tag=LU604_RS08170;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_016189975.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1531108 1531805 . + . ID=gene-LU604_RS08175;Name=LU604_RS08175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08175;old_locus_tag=LU604_08175;pseudo=true NZ_CP089942.1 Protein Homology CDS 1531108 1531805 . + 0 ID=cds-LU604_RS08175;Parent=gene-LU604_RS08175;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS08175;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1531994 1532488 . - . ID=gene-LU604_RS08180;Name=LU604_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08180;old_locus_tag=LU604_08180 NZ_CP089942.1 GeneMarkS-2+ CDS 1531994 1532488 . - 0 ID=cds-WP_233480347.1;Parent=gene-LU604_RS08180;Dbxref=Genbank:WP_233480347.1;Name=WP_233480347.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08180;product=hypothetical protein;protein_id=WP_233480347.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1532596 1532856 . - . ID=gene-LU604_RS08185;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=LU604_RS08185;old_locus_tag=LU604_08185 NZ_CP089942.1 Protein Homology CDS 1532596 1532856 . - 0 ID=cds-WP_016189973.1;Parent=gene-LU604_RS08185;Dbxref=Genbank:WP_016189973.1;Name=WP_016189973.1;Ontology_term=GO:0051537;gbkey=CDS;gene=yfaE;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440963.1;locus_tag=LU604_RS08185;product=class I ribonucleotide reductase maintenance protein YfaE;protein_id=WP_016189973.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1532858 1533988 . - . ID=gene-LU604_RS08190;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=LU604_RS08190;old_locus_tag=LU604_08190 NZ_CP089942.1 Protein Homology CDS 1532858 1533988 . - 0 ID=cds-WP_016189972.1;Parent=gene-LU604_RS08190;Dbxref=Genbank:WP_016189972.1;Name=WP_016189972.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=LU604_RS08190;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_016189972.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1534052 1536337 . - . ID=gene-LU604_RS08195;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=LU604_RS08195;old_locus_tag=LU604_08195 NZ_CP089942.1 Protein Homology CDS 1534052 1536337 . - 0 ID=cds-WP_233480348.1;Parent=gene-LU604_RS08195;Dbxref=Genbank:WP_233480348.1;Name=WP_233480348.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=LU604_RS08195;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_233480348.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1536842 1537570 . - . ID=gene-LU604_RS08200;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=LU604_RS08200;old_locus_tag=LU604_08200 NZ_CP089942.1 Protein Homology CDS 1536842 1537570 . - 0 ID=cds-WP_016189970.1;Parent=gene-LU604_RS08200;Dbxref=Genbank:WP_016189970.1;Name=WP_016189970.1;Ontology_term=GO:0006744,GO:0008689;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinone-9 3-O-methyltransferase activity|0008689||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203057.1;locus_tag=LU604_RS08200;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_016189970.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1537763 1540402 . + . ID=gene-LU604_RS08205;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=LU604_RS08205;old_locus_tag=LU604_08205 NZ_CP089942.1 Protein Homology CDS 1537763 1540402 . + 0 ID=cds-WP_016189969.1;Parent=gene-LU604_RS08205;Dbxref=Genbank:WP_016189969.1;Name=WP_016189969.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120003.1;locus_tag=LU604_RS08205;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_016189969.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1540602 1543457 . + . ID=gene-LU604_RS08210;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=LU604_RS08210;old_locus_tag=LU604_08210 NZ_CP089942.1 Protein Homology CDS 1540602 1543457 . + 0 ID=cds-WP_233480349.1;Parent=gene-LU604_RS08210;Dbxref=Genbank:WP_233480349.1;Name=WP_233480349.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854206.1;locus_tag=LU604_RS08210;product=two-component system sensor histidine kinase RcsC;protein_id=WP_233480349.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1543853 1544503 . - . ID=gene-LU604_RS08215;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=LU604_RS08215;old_locus_tag=LU604_08215 NZ_CP089942.1 Protein Homology CDS 1543853 1544503 . - 0 ID=cds-WP_233480350.1;Parent=gene-LU604_RS08215;Dbxref=Genbank:WP_233480350.1;Name=WP_233480350.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189967.1;locus_tag=LU604_RS08215;product=response regulator transcription factor RcsB;protein_id=WP_233480350.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1544500 1547154 . - . ID=gene-LU604_RS08220;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=LU604_RS08220;old_locus_tag=LU604_08220 NZ_CP089942.1 Protein Homology CDS 1544500 1547154 . - 0 ID=cds-WP_016189966.1;Parent=gene-LU604_RS08220;Dbxref=Genbank:WP_016189966.1;Name=WP_016189966.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014538751.1;locus_tag=LU604_RS08220;product=phosphotransferase RcsD;protein_id=WP_016189966.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1548526 1549632 . + . ID=gene-LU604_RS08225;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=LU604_RS08225;old_locus_tag=LU604_08225 NZ_CP089942.1 Protein Homology CDS 1548526 1549632 . + 0 ID=cds-WP_233480351.1;Parent=gene-LU604_RS08225;Dbxref=Genbank:WP_233480351.1;Name=WP_233480351.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000865552.1;locus_tag=LU604_RS08225;product=porin OmpC;protein_id=WP_233480351.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1549714 1549842 . - . ID=gene-LU604_RS26955;Name=LU604_RS26955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26955 NZ_CP089942.1 GeneMarkS-2+ CDS 1549714 1549842 . - 0 ID=cds-WP_016189963.1;Parent=gene-LU604_RS26955;Dbxref=Genbank:WP_016189963.1;Name=WP_016189963.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26955;product=hypothetical protein;protein_id=WP_016189963.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1549998 1551038 . + . ID=gene-LU604_RS08230;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=LU604_RS08230;old_locus_tag=LU604_08230 NZ_CP089942.1 Protein Homology CDS 1549998 1551038 . + 0 ID=cds-WP_016189962.1;Parent=gene-LU604_RS08230;Dbxref=Genbank:WP_016189962.1;Name=WP_016189962.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509844.1;locus_tag=LU604_RS08230;product=FAD:protein FMN transferase ApbE;protein_id=WP_016189962.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1551060 1551703 . + . ID=gene-LU604_RS08235;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=pseudogene;locus_tag=LU604_RS08235;old_locus_tag=LU604_08235;pseudo=true NZ_CP089942.1 Protein Homology CDS 1551060 1551703 . + 0 ID=cds-LU604_RS08235;Parent=gene-LU604_RS08235;Note=frameshifted%3B internal stop;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203043.1;locus_tag=LU604_RS08235;product=DNA oxidative demethylase AlkB;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1552053 1552829 . - . ID=gene-LU604_RS08240;Name=LU604_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08240;old_locus_tag=LU604_08240 NZ_CP089942.1 Protein Homology CDS 1552053 1552829 . - 0 ID=cds-WP_233480352.1;Parent=gene-LU604_RS08240;Dbxref=Genbank:WP_233480352.1;Name=WP_233480352.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: protein motif:HMM:NF013786.2;locus_tag=LU604_RS08240;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_233480352.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1552983 1553585 . - . ID=gene-LU604_RS08245;Name=LU604_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08245;old_locus_tag=LU604_08245 NZ_CP089942.1 Protein Homology CDS 1552983 1553585 . - 0 ID=cds-WP_233480353.1;Parent=gene-LU604_RS08245;Dbxref=Genbank:WP_233480353.1;Name=WP_233480353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189958.1;locus_tag=LU604_RS08245;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_233480353.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1553967 1554218 . - . ID=gene-LU604_RS08250;Name=LU604_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08250;old_locus_tag=LU604_08250 NZ_CP089942.1 GeneMarkS-2+ CDS 1553967 1554218 . - 0 ID=cds-WP_233481653.1;Parent=gene-LU604_RS08250;Dbxref=Genbank:WP_233481653.1;Name=WP_233481653.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08250;product=hypothetical protein;protein_id=WP_233481653.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1554217 1554306 . + . ID=gene-LU604_RS08255;Name=LU604_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08255;old_locus_tag=LU604_08255 NZ_CP089942.1 Protein Homology CDS 1554217 1554306 . + 0 ID=cds-WP_233480755.1;Parent=gene-LU604_RS08255;Dbxref=Genbank:WP_233480755.1;Name=WP_233480755.1;Note=In lambda-like phage%2C genes encoding the i-spanin subunit Rz%2C and the o-spanin subunit Rz1 (this protein) overlap.;Ontology_term=GO:0019076,GO:0019835;gbkey=CDS;go_process=viral release from host cell|0019076||IEA,cytolysis|0019835||IEA;inference=COORDINATES: protein motif:HMM:NF017860.2;locus_tag=LU604_RS08255;product=lysis system o-spanin lipoprotein Rz1;protein_id=WP_233480755.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1554327 1555447 . - . ID=gene-LU604_RS08260;Name=LU604_RS08260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08260;old_locus_tag=LU604_08260;pseudo=true NZ_CP089942.1 Protein Homology CDS 1554327 1555447 . - 0 ID=cds-LU604_RS08260;Parent=gene-LU604_RS08260;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU604_RS08260;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1555818 1556515 . - . ID=gene-LU604_RS08265;Name=LU604_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08265;old_locus_tag=LU604_08265 NZ_CP089942.1 Protein Homology CDS 1556266 1556515 . - 0 ID=cds-WP_233481552.1;Parent=gene-LU604_RS08265;Dbxref=Genbank:WP_233481552.1;Name=WP_233481552.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS08265;product=IS1 family transposase;protein_id=WP_233481552.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 1555818 1556266 . - 2 ID=cds-WP_233481552.1;Parent=gene-LU604_RS08265;Dbxref=Genbank:WP_233481552.1;Name=WP_233481552.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS08265;product=IS1 family transposase;protein_id=WP_233481552.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1556589 1556909 . + . ID=gene-LU604_RS08270;Name=LU604_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08270;old_locus_tag=LU604_08270 NZ_CP089942.1 Protein Homology CDS 1556589 1556909 . + 0 ID=cds-WP_233480356.1;Parent=gene-LU604_RS08270;Dbxref=Genbank:WP_233480356.1;Name=WP_233480356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189951.1;locus_tag=LU604_RS08270;product=DUF1493 family protein;protein_id=WP_233480356.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1557129 1557383 . + . ID=gene-LU604_RS08275;Name=LU604_RS08275;end_range=1557383,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08275;old_locus_tag=LU604_08275;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1557129 1557383 . + 0 ID=cds-LU604_RS08275;Parent=gene-LU604_RS08275;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019068,GO:0005198,GO:0044423;end_range=1557383,.;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077814.1;locus_tag=LU604_RS08275;partial=true;product=phage major capsid protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1557587 1557754 . - . ID=gene-LU604_RS08280;Name=LU604_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08280;old_locus_tag=LU604_08280 NZ_CP089942.1 Protein Homology CDS 1557587 1557754 . - 0 ID=cds-WP_233480357.1;Parent=gene-LU604_RS08280;Dbxref=Genbank:WP_233480357.1;Name=WP_233480357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189949.1;locus_tag=LU604_RS08280;product=YfgG family protein;protein_id=WP_233480357.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1557883 1558137 . + . ID=gene-LU604_RS08285;Name=LU604_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08285;old_locus_tag=LU604_08285 NZ_CP089942.1 GeneMarkS-2+ CDS 1557883 1558137 . + 0 ID=cds-WP_016189948.1;Parent=gene-LU604_RS08285;Dbxref=Genbank:WP_016189948.1;Name=WP_016189948.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08285;product=hypothetical protein;protein_id=WP_016189948.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1558087 1558692 . - . ID=gene-LU604_RS08290;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=LU604_RS08290;old_locus_tag=LU604_08290 NZ_CP089942.1 Protein Homology CDS 1558087 1558692 . - 0 ID=cds-WP_016189947.1;Parent=gene-LU604_RS08290;Dbxref=Genbank:WP_016189947.1;Name=WP_016189947.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203377.1;locus_tag=LU604_RS08290;product=tellurite resistance methyltransferase TehB;protein_id=WP_016189947.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1558689 1560221 . - . ID=gene-LU604_RS08295;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=LU604_RS08295;old_locus_tag=LU604_08295 NZ_CP089942.1 Protein Homology CDS 1558689 1560221 . - 0 ID=cds-WP_233480358.1;Parent=gene-LU604_RS08295;Dbxref=Genbank:WP_233480358.1;Name=WP_233480358.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189946.1;locus_tag=LU604_RS08295;product=exopolyphosphatase;protein_id=WP_233480358.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1560228 1562288 . - . ID=gene-LU604_RS08300;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=LU604_RS08300;old_locus_tag=LU604_08300 NZ_CP089942.1 Protein Homology CDS 1560228 1562288 . - 0 ID=cds-WP_016189945.1;Parent=gene-LU604_RS08300;Dbxref=Genbank:WP_016189945.1;Name=WP_016189945.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311390.1;locus_tag=LU604_RS08300;product=polyphosphate kinase 1;protein_id=WP_016189945.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1562445 1562594 . + . ID=gene-LU604_RS08305;Name=LU604_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08305;old_locus_tag=LU604_08305 NZ_CP089942.1 GeneMarkS-2+ CDS 1562445 1562594 . + 0 ID=cds-WP_161796970.1;Parent=gene-LU604_RS08305;Dbxref=Genbank:WP_161796970.1;Name=WP_161796970.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08305;product=hypothetical protein;protein_id=WP_161796970.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1562654 1563292 . - . ID=gene-LU604_RS08310;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=LU604_RS08310;old_locus_tag=LU604_08310 NZ_CP089942.1 Protein Homology CDS 1562654 1563292 . - 0 ID=cds-WP_016189944.1;Parent=gene-LU604_RS08310;Dbxref=Genbank:WP_016189944.1;Name=WP_016189944.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848743.1;locus_tag=LU604_RS08310;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_016189944.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1563289 1564329 . - . ID=gene-LU604_RS08315;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=LU604_RS08315;old_locus_tag=LU604_08315 NZ_CP089942.1 Protein Homology CDS 1563289 1564329 . - 0 ID=cds-WP_233480756.1;Parent=gene-LU604_RS08315;Dbxref=Genbank:WP_233480756.1;Name=WP_233480756.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189943.1;locus_tag=LU604_RS08315;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_233480756.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1564572 1565198 . + . ID=gene-LU604_RS08320;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=LU604_RS08320;old_locus_tag=LU604_08320 NZ_CP089942.1 Protein Homology CDS 1564572 1565198 . + 0 ID=cds-WP_233480359.1;Parent=gene-LU604_RS08320;Dbxref=Genbank:WP_233480359.1;Name=WP_233480359.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=LU604_RS08320;product=uracil phosphoribosyltransferase;protein_id=WP_233480359.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1565198 1565353 . + . ID=gene-LU604_RS08325;Name=LU604_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08325;old_locus_tag=LU604_08325 NZ_CP089942.1 GeneMarkS-2+ CDS 1565198 1565353 . + 0 ID=cds-WP_157275210.1;Parent=gene-LU604_RS08325;Dbxref=Genbank:WP_157275210.1;Name=WP_157275210.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08325;product=hypothetical protein;protein_id=WP_157275210.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1565414 1566691 . + . ID=gene-LU604_RS08330;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=LU604_RS08330;old_locus_tag=LU604_08330 NZ_CP089942.1 Protein Homology CDS 1565414 1566691 . + 0 ID=cds-WP_016189941.1;Parent=gene-LU604_RS08330;Dbxref=Genbank:WP_016189941.1;Name=WP_016189941.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010260058.1;locus_tag=LU604_RS08330;product=uracil permease;protein_id=WP_016189941.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1567536 1568243 . + . ID=gene-LU604_RS08335;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=LU604_RS08335;old_locus_tag=LU604_08335 NZ_CP089942.1 Protein Homology CDS 1567536 1568243 . + 0 ID=cds-WP_040465400.1;Parent=gene-LU604_RS08335;Dbxref=Genbank:WP_040465400.1;Name=WP_040465400.1;gbkey=CDS;gene=hda;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228401.1;locus_tag=LU604_RS08335;product=DnaA inactivator Hda;protein_id=WP_040465400.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1568271 1568624 . - . ID=gene-LU604_RS08340;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=LU604_RS08340;old_locus_tag=LU604_08340 NZ_CP089942.1 Protein Homology CDS 1568271 1568624 . - 0 ID=cds-WP_016189939.1;Parent=gene-LU604_RS08340;Dbxref=Genbank:WP_016189939.1;Name=WP_016189939.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006316889.1;locus_tag=LU604_RS08340;product=arsenate reductase (glutaredoxin);protein_id=WP_016189939.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1568638 1570095 . - . ID=gene-LU604_RS08345;Name=LU604_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08345;old_locus_tag=LU604_08345 NZ_CP089942.1 Protein Homology CDS 1568638 1570095 . - 0 ID=cds-WP_040465399.1;Parent=gene-LU604_RS08345;Dbxref=Genbank:WP_040465399.1;Name=WP_040465399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440808.1;locus_tag=LU604_RS08345;product=M48 family metallopeptidase;protein_id=WP_040465399.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1570857 1571554 . - . ID=gene-LU604_RS08350;Name=LU604_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08350;old_locus_tag=LU604_08350 NZ_CP089942.1 Protein Homology CDS 1571305 1571554 . - 0 ID=cds-WP_233480360.1;Parent=gene-LU604_RS08350;Dbxref=Genbank:WP_233480360.1;Name=WP_233480360.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS08350;product=IS1 family transposase;protein_id=WP_233480360.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 1570857 1571305 . - 2 ID=cds-WP_233480360.1;Parent=gene-LU604_RS08350;Dbxref=Genbank:WP_233480360.1;Name=WP_233480360.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS08350;product=IS1 family transposase;protein_id=WP_233480360.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1571760 1572227 . - . ID=gene-LU604_RS08355;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=LU604_RS08355;old_locus_tag=LU604_08355 NZ_CP089942.1 Protein Homology CDS 1571760 1572227 . - 0 ID=cds-WP_016189937.1;Parent=gene-LU604_RS08355;Dbxref=Genbank:WP_016189937.1;Name=WP_016189937.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803235.1;locus_tag=LU604_RS08355;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_016189937.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1572205 1572798 . - . ID=gene-LU604_RS08360;Name=LU604_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08360;old_locus_tag=LU604_08360 NZ_CP089942.1 Protein Homology CDS 1572205 1572798 . - 0 ID=cds-WP_016189936.1;Parent=gene-LU604_RS08360;Dbxref=Genbank:WP_016189936.1;Name=WP_016189936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803236.1;locus_tag=LU604_RS08360;product=glycine cleavage system transcriptional repressor;protein_id=WP_016189936.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1572956 1573834 . + . ID=gene-LU604_RS08365;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=LU604_RS08365;old_locus_tag=LU604_08365 NZ_CP089942.1 Protein Homology CDS 1572956 1573834 . + 0 ID=cds-WP_016189935.1;Parent=gene-LU604_RS08365;Dbxref=Genbank:WP_016189935.1;Name=WP_016189935.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=LU604_RS08365;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_016189935.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1573850 1574884 . + . ID=gene-LU604_RS08370;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=LU604_RS08370;old_locus_tag=LU604_08370 NZ_CP089942.1 Protein Homology CDS 1573850 1574884 . + 0 ID=cds-WP_016189934.1;Parent=gene-LU604_RS08370;Dbxref=Genbank:WP_016189934.1;Name=WP_016189934.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168244.1;locus_tag=LU604_RS08370;product=outer membrane protein assembly factor BamC;protein_id=WP_016189934.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1575330 1576043 . + . ID=gene-LU604_RS08375;Name=LU604_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08375;old_locus_tag=LU604_08375 NZ_CP089942.1 Protein Homology CDS 1575330 1576043 . + 0 ID=cds-WP_016189933.1;Parent=gene-LU604_RS08375;Dbxref=Genbank:WP_016189933.1;Name=WP_016189933.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=LU604_RS08375;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_016189933.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1576089 1576727 . + . ID=gene-LU604_RS08380;Name=LU604_RS08380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08380;old_locus_tag=LU604_08380;partial=true;pseudo=true;start_range=.,1576089 NZ_CP089942.1 Protein Homology CDS 1576089 1576727 . + 0 ID=cds-LU604_RS08380;Parent=gene-LU604_RS08380;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008108361.1;locus_tag=LU604_RS08380;partial=true;product=zinc metallopeptidase;pseudo=true;start_range=.,1576089;transl_table=11 NZ_CP089942.1 RefSeq gene 1576727 1578742 . + . ID=gene-LU604_RS08385;Name=LU604_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08385;old_locus_tag=LU604_08385 NZ_CP089942.1 Protein Homology CDS 1576727 1578742 . + 0 ID=cds-WP_233480361.1;Parent=gene-LU604_RS08385;Dbxref=Genbank:WP_233480361.1;Name=WP_233480361.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544849.1;locus_tag=LU604_RS08385;product=GNAT family N-acetyltransferase;protein_id=WP_233480361.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1579068 1579256 . - . ID=gene-LU604_RS08390;Name=LU604_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08390;old_locus_tag=LU604_08390 NZ_CP089942.1 Protein Homology CDS 1579068 1579256 . - 0 ID=cds-WP_233480362.1;Parent=gene-LU604_RS08390;Dbxref=Genbank:WP_233480362.1;Name=WP_233480362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014605299.1;locus_tag=LU604_RS08390;product=YpfN family protein;protein_id=WP_233480362.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1579265 1580392 . - . ID=gene-LU604_RS08395;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=LU604_RS08395;old_locus_tag=LU604_08395 NZ_CP089942.1 Protein Homology CDS 1579265 1580392 . - 0 ID=cds-WP_233480363.1;Parent=gene-LU604_RS08395;Dbxref=Genbank:WP_233480363.1;Name=WP_233480363.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461418.1;locus_tag=LU604_RS08395;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_233480363.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1580395 1580781 . - . ID=gene-LU604_RS08400;Name=LU604_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08400;old_locus_tag=LU604_08400 NZ_CP089942.1 Protein Homology CDS 1580395 1580781 . - 0 ID=cds-WP_016189928.1;Parent=gene-LU604_RS08400;Dbxref=Genbank:WP_016189928.1;Name=WP_016189928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544831.1;locus_tag=LU604_RS08400;product=ArsC family reductase;protein_id=WP_016189928.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1580780 1581154 . + . ID=gene-LU604_RS08405;Name=LU604_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08405;old_locus_tag=LU604_08405 NZ_CP089942.1 GeneMarkS-2+ CDS 1580780 1581154 . + 0 ID=cds-WP_233480364.1;Parent=gene-LU604_RS08405;Dbxref=Genbank:WP_233480364.1;Name=WP_233480364.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08405;product=hypothetical protein;protein_id=WP_233480364.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1581218 1582044 . + . ID=gene-LU604_RS08410;Name=LU604_RS08410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08410;old_locus_tag=LU604_08410;pseudo=true NZ_CP089942.1 Protein Homology CDS 1581218 1582044 . + 0 ID=cds-LU604_RS08410;Parent=gene-LU604_RS08410;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS08410;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1582291 1582988 . - . ID=gene-LU604_RS08415;Name=LU604_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08415;old_locus_tag=LU604_08415 NZ_CP089942.1 Protein Homology CDS 1582739 1582988 . - 0 ID=cds-WP_233481553.1;Parent=gene-LU604_RS08415;Dbxref=Genbank:WP_233481553.1;Name=WP_233481553.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS08415;product=IS1 family transposase;protein_id=WP_233481553.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 1582291 1582739 . - 2 ID=cds-WP_233481553.1;Parent=gene-LU604_RS08415;Dbxref=Genbank:WP_233481553.1;Name=WP_233481553.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS08415;product=IS1 family transposase;protein_id=WP_233481553.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1583102 1583308 . - . ID=gene-LU604_RS08420;Name=LU604_RS08420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08420;old_locus_tag=LU604_08420;partial=true;pseudo=true;start_range=.,1583102 NZ_CP089942.1 Protein Homology CDS 1583102 1583308 . - 0 ID=cds-LU604_RS08420;Parent=gene-LU604_RS08420;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022869.2;locus_tag=LU604_RS08420;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1583102;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1583285 1583497 . - . ID=gene-LU604_RS08425;Name=LU604_RS08425;end_range=1583497,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08425;old_locus_tag=LU604_08425;partial=true;pseudo=true;start_range=.,1583285 NZ_CP089942.1 Protein Homology CDS 1583285 1583497 . - 0 ID=cds-LU604_RS08425;Parent=gene-LU604_RS08425;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1583497,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437528.1;locus_tag=LU604_RS08425;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1583285;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1583610 1583735 . + . ID=gene-LU604_RS08430;Name=LU604_RS08430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08430;old_locus_tag=LU604_08430;partial=true;pseudo=true;start_range=.,1583610 NZ_CP089942.1 Protein Homology CDS 1583610 1583735 . + 0 ID=cds-LU604_RS08430;Parent=gene-LU604_RS08430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152402.1;locus_tag=LU604_RS08430;partial=true;product=LacI family DNA-binding transcriptional regulator;pseudo=true;start_range=.,1583610;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1583869 1584621 . + . ID=gene-LU604_RS08435;Name=LU604_RS08435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08435;old_locus_tag=LU604_08435;pseudo=true NZ_CP089942.1 Protein Homology CDS 1583869 1584621 . + 0 ID=cds-LU604_RS08435;Parent=gene-LU604_RS08435;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=LU604_RS08435;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1584862 1585062 . + . ID=gene-LU604_RS08440;Name=LU604_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08440;old_locus_tag=LU604_08440 NZ_CP089942.1 GeneMarkS-2+ CDS 1584862 1585062 . + 0 ID=cds-WP_233480366.1;Parent=gene-LU604_RS08440;Dbxref=Genbank:WP_233480366.1;Name=WP_233480366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08440;product=hypothetical protein;protein_id=WP_233480366.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1584972 1585457 . + . ID=gene-LU604_RS08445;Name=LU604_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08445;old_locus_tag=LU604_08445 NZ_CP089942.1 Protein Homology CDS 1584972 1585457 . + 0 ID=cds-WP_016189920.1;Parent=gene-LU604_RS08445;Dbxref=Genbank:WP_016189920.1;Name=WP_016189920.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025677.2;locus_tag=LU604_RS08445;product=IS91 family transposase;protein_id=WP_016189920.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1585697 1585841 . + . ID=gene-LU604_RS08450;Name=LU604_RS08450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08450;old_locus_tag=LU604_08450;partial=true;pseudo=true;start_range=.,1585697 NZ_CP089942.1 Protein Homology CDS 1585697 1585841 . + 0 ID=cds-LU604_RS08450;Parent=gene-LU604_RS08450;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343765.1;locus_tag=LU604_RS08450;partial=true;product=transposase;pseudo=true;start_range=.,1585697;transl_table=11 NZ_CP089942.1 RefSeq gene 1585911 1586852 . - . ID=gene-LU604_RS08455;Name=LU604_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08455;old_locus_tag=LU604_08455 NZ_CP089942.1 Protein Homology CDS 1585911 1586852 . - 0 ID=cds-WP_016189919.1;Parent=gene-LU604_RS08455;Dbxref=Genbank:WP_016189919.1;Name=WP_016189919.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017231.2;locus_tag=LU604_RS08455;product=XopAH/AvrB family type III secretion system effector;protein_id=WP_016189919.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1587460 1587835 . - . ID=gene-LU604_RS08460;Name=LU604_RS08460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08460;old_locus_tag=LU604_08460;partial=true;pseudo=true;start_range=.,1587460 NZ_CP089942.1 Protein Homology CDS 1587460 1587835 . - 0 ID=cds-LU604_RS08460;Parent=gene-LU604_RS08460;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147726.1;locus_tag=LU604_RS08460;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;start_range=.,1587460;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1588196 1588446 . + . ID=gene-LU604_RS08465;Name=LU604_RS08465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08465;old_locus_tag=LU604_08465;partial=true;pseudo=true;start_range=.,1588196 NZ_CP089942.1 Protein Homology CDS 1588196 1588446 . + 0 ID=cds-LU604_RS08465;Parent=gene-LU604_RS08465;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=LU604_RS08465;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,1588196;transl_table=11 NZ_CP089942.1 RefSeq gene 1588677 1589999 . + . ID=gene-LU604_RS08470;Name=LU604_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08470;old_locus_tag=LU604_08470 NZ_CP089942.1 GeneMarkS-2+ CDS 1588677 1589999 . + 0 ID=cds-WP_233480367.1;Parent=gene-LU604_RS08470;Dbxref=Genbank:WP_233480367.1;Name=WP_233480367.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08470;product=hypothetical protein;protein_id=WP_233480367.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1590072 1590173 . - . ID=gene-LU604_RS08475;Name=LU604_RS08475;end_range=1590173,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08475;old_locus_tag=LU604_08475;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1590072 1590173 . - 0 ID=cds-LU604_RS08475;Parent=gene-LU604_RS08475;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1590173,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001067783.1;locus_tag=LU604_RS08475;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1590193 1591374 . - . ID=gene-LU604_RS08480;Name=LU604_RS08480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08480;old_locus_tag=LU604_08480;pseudo=true NZ_CP089942.1 Protein Homology CDS 1590193 1591374 . - 0 ID=cds-LU604_RS08480;Parent=gene-LU604_RS08480;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025244073.1;locus_tag=LU604_RS08480;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1591560 1591748 . + . ID=gene-LU604_RS08485;Name=LU604_RS08485;end_range=1591748,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08485;old_locus_tag=LU604_08485;partial=true;pseudo=true;start_range=.,1591560 NZ_CP089942.1 Protein Homology CDS 1591560 1591748 . + 0 ID=cds-LU604_RS08485;Parent=gene-LU604_RS08485;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1591748,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006119812.1;locus_tag=LU604_RS08485;partial=true;product=serine-type D-Ala-D-Ala carboxypeptidase;pseudo=true;start_range=.,1591560;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1591738 1591878 . - . ID=gene-LU604_RS26960;Name=LU604_RS26960;end_range=1591878,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS26960;partial=true;pseudo=true;start_range=.,1591738 NZ_CP089942.1 Protein Homology CDS 1591738 1591878 . - 0 ID=cds-LU604_RS26960;Parent=gene-LU604_RS26960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1591878,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105637.1;locus_tag=LU604_RS26960;partial=true;product=pyridine nucleotide-disulfide oxidoreductase;pseudo=true;start_range=.,1591738;transl_table=11 NZ_CP089942.1 RefSeq gene 1592315 1592635 . + . ID=gene-LU604_RS08490;Name=LU604_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08490;old_locus_tag=LU604_08490 NZ_CP089942.1 Protein Homology CDS 1592315 1592635 . + 0 ID=cds-WP_016189911.1;Parent=gene-LU604_RS08490;Dbxref=Genbank:WP_016189911.1;Name=WP_016189911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013026330.1;locus_tag=LU604_RS08490;product=DUF496 family protein;protein_id=WP_016189911.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1593101 1594543 . + . ID=gene-LU604_RS08495;Name=LU604_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08495;old_locus_tag=LU604_08495 NZ_CP089942.1 Protein Homology CDS 1593101 1594543 . + 0 ID=cds-WP_233480757.1;Parent=gene-LU604_RS08495;Dbxref=Genbank:WP_233480757.1;Name=WP_233480757.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189910.1;locus_tag=LU604_RS08495;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_233480757.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1594623 1595765 . + . ID=gene-LU604_RS08500;Name=LU604_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08500;old_locus_tag=LU604_08500 NZ_CP089942.1 Protein Homology CDS 1594623 1595765 . + 0 ID=cds-WP_233480368.1;Parent=gene-LU604_RS08500;Dbxref=Genbank:WP_233480368.1;Name=WP_233480368.1;Ontology_term=GO:0009234,GO:0008909,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isochorismate synthase activity|0008909||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189909.1;locus_tag=LU604_RS08500;product=isochorismate synthase;protein_id=WP_233480368.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1595956 1597392 . + . ID=gene-LU604_RS08505;Name=LU604_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08505;old_locus_tag=LU604_08505 NZ_CP089942.1 Protein Homology CDS 1595956 1597392 . + 0 ID=cds-WP_082103834.1;Parent=gene-LU604_RS08505;Dbxref=Genbank:WP_082103834.1;Name=WP_082103834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010284433.1;locus_tag=LU604_RS08505;product=glycoside hydrolase family 1 protein;protein_id=WP_082103834.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1598573 1599076 . - . ID=gene-LU604_RS08510;Name=LU604_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08510;old_locus_tag=LU604_08510 NZ_CP089942.1 Protein Homology CDS 1598573 1599076 . - 0 ID=cds-WP_046371993.1;Parent=gene-LU604_RS08510;Dbxref=Genbank:WP_046371993.1;Name=WP_046371993.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU604_RS08510;product=IS1 family transposase;protein_id=WP_046371993.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1598995 1599270 . - . ID=gene-LU604_RS08515;Name=LU604_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08515;old_locus_tag=LU604_08515 NZ_CP089942.1 Protein Homology CDS 1598995 1599270 . - 0 ID=cds-WP_233480369.1;Parent=gene-LU604_RS08515;Dbxref=Genbank:WP_233480369.1;Name=WP_233480369.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU604_RS08515;product=IS1-like element transposase;protein_id=WP_233480369.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1599333 1599596 . + . ID=gene-LU604_RS08520;Name=LU604_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08520;old_locus_tag=LU604_08520 NZ_CP089942.1 Protein Homology CDS 1599333 1599596 . + 0 ID=cds-WP_233480370.1;Parent=gene-LU604_RS08520;Dbxref=Genbank:WP_233480370.1;Name=WP_233480370.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: protein motif:HMM:NF018262.2;locus_tag=LU604_RS08520;product=antiterminator Q family protein;protein_id=WP_233480370.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1600009 1601017 . - . ID=gene-LU604_RS08525;Name=LU604_RS08525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08525;old_locus_tag=LU604_08525;pseudo=true NZ_CP089942.1 Protein Homology CDS 1600009 1601017 . - 0 ID=cds-LU604_RS08525;Parent=gene-LU604_RS08525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667639.1;locus_tag=LU604_RS08525;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1601398 1601898 . + . ID=gene-LU604_RS08530;Name=LU604_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08530;old_locus_tag=LU604_08530 NZ_CP089942.1 Protein Homology CDS 1601398 1601898 . + 0 ID=cds-WP_233480371.1;Parent=gene-LU604_RS08530;Dbxref=Genbank:WP_233480371.1;Name=WP_233480371.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: protein motif:HMM:NF012372.2;locus_tag=LU604_RS08530;product=DNA cytosine methyltransferase;protein_id=WP_233480371.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1601864 1602462 . - . ID=gene-LU604_RS08535;Name=LU604_RS08535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08535;old_locus_tag=LU604_08535;partial=true;pseudo=true;start_range=.,1601864 NZ_CP089942.1 Protein Homology CDS 1601864 1602462 . - 0 ID=cds-LU604_RS08535;Parent=gene-LU604_RS08535;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU604_RS08535;partial=true;product=transposase;pseudo=true;start_range=.,1601864;transl_table=11 NZ_CP089942.1 RefSeq gene 1602879 1603544 . + . ID=gene-LU604_RS08540;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=LU604_RS08540;old_locus_tag=LU604_08540 NZ_CP089942.1 Protein Homology CDS 1602879 1603544 . + 0 ID=cds-WP_233480372.1;Parent=gene-LU604_RS08540;Dbxref=Genbank:WP_233480372.1;Name=WP_233480372.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189902.1;locus_tag=LU604_RS08540;product=GTP cyclohydrolase I FolE;protein_id=WP_233480372.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1603553 1604707 . + . ID=gene-LU604_RS08545;Name=LU604_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08545;old_locus_tag=LU604_08545 NZ_CP089942.1 Protein Homology CDS 1603553 1604707 . + 0 ID=cds-WP_233480373.1;Parent=gene-LU604_RS08545;Dbxref=Genbank:WP_233480373.1;Name=WP_233480373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189901.1;locus_tag=LU604_RS08545;product=DUF418 family protein;protein_id=WP_233480373.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1604863 1605861 . + . ID=gene-LU604_RS08550;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=LU604_RS08550;old_locus_tag=LU604_08550 NZ_CP089942.1 Protein Homology CDS 1604863 1605861 . + 0 ID=cds-WP_016189900.1;Parent=gene-LU604_RS08550;Dbxref=Genbank:WP_016189900.1;Name=WP_016189900.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203001.1;locus_tag=LU604_RS08550;product=HTH-type transcriptional regulator GalS;protein_id=WP_016189900.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1606199 1607194 . + . ID=gene-LU604_RS08555;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=LU604_RS08555;old_locus_tag=LU604_08555 NZ_CP089942.1 Protein Homology CDS 1606199 1607194 . + 0 ID=cds-WP_016189899.1;Parent=gene-LU604_RS08555;Dbxref=Genbank:WP_016189899.1;Name=WP_016189899.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170245.1;locus_tag=LU604_RS08555;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_016189899.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1607285 1608805 . + . ID=gene-LU604_RS08560;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=LU604_RS08560;old_locus_tag=LU604_08560 NZ_CP089942.1 Protein Homology CDS 1607285 1608805 . + 0 ID=cds-WP_016189898.1;Parent=gene-LU604_RS08560;Dbxref=Genbank:WP_016189898.1;Name=WP_016189898.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799414.1;locus_tag=LU604_RS08560;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_016189898.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1608825 1609835 . + . ID=gene-LU604_RS08565;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=LU604_RS08565;old_locus_tag=LU604_08565 NZ_CP089942.1 Protein Homology CDS 1608825 1609835 . + 0 ID=cds-WP_016189897.1;Parent=gene-LU604_RS08565;Dbxref=Genbank:WP_016189897.1;Name=WP_016189897.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461133.1;locus_tag=LU604_RS08565;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_016189897.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1610003 1610440 . + . ID=gene-LU604_RS08570;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS08570;old_locus_tag=LU604_08570 NZ_CP089942.1 Protein Homology CDS 1610003 1610440 . + 0 ID=cds-WP_233480374.1;Parent=gene-LU604_RS08570;Dbxref=Genbank:WP_233480374.1;Name=WP_233480374.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU604_RS08570;product=IS200/IS605 family transposase;protein_id=WP_233480374.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1610685 1610891 . + . ID=gene-LU604_RS08575;Name=LU604_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08575;old_locus_tag=LU604_08575 NZ_CP089942.1 GeneMarkS-2+ CDS 1610685 1610891 . + 0 ID=cds-WP_233480375.1;Parent=gene-LU604_RS08575;Dbxref=Genbank:WP_233480375.1;Name=WP_233480375.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08575;product=hypothetical protein;protein_id=WP_233480375.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1611175 1612020 . - . ID=gene-LU604_RS08580;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=LU604_RS08580;old_locus_tag=LU604_08580 NZ_CP089942.1 Protein Homology CDS 1611175 1612020 . - 0 ID=cds-WP_233480376.1;Parent=gene-LU604_RS08580;Dbxref=Genbank:WP_233480376.1;Name=WP_233480376.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014609091.1;locus_tag=LU604_RS08580;product=outer membrane permeability protein SanA;protein_id=WP_233480376.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1612247 1613944 . - . ID=gene-LU604_RS08585;Name=LU604_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08585;old_locus_tag=LU604_08585 NZ_CP089942.1 Protein Homology CDS 1612247 1613944 . - 0 ID=cds-WP_233480758.1;Parent=gene-LU604_RS08585;Dbxref=Genbank:WP_233480758.1;Name=WP_233480758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227114.1;locus_tag=LU604_RS08585;product=NAD-dependent malic enzyme;protein_id=WP_233480758.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1614064 1614948 . - . ID=gene-LU604_RS08590;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=LU604_RS08590;old_locus_tag=LU604_08590 NZ_CP089942.1 Protein Homology CDS 1614064 1614948 . - 0 ID=cds-WP_233480377.1;Parent=gene-LU604_RS08590;Dbxref=Genbank:WP_233480377.1;Name=WP_233480377.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189893.1;locus_tag=LU604_RS08590;product=cytidine deaminase;protein_id=WP_233480377.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1615076 1615768 . - . ID=gene-LU604_RS08595;Name=LU604_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08595;old_locus_tag=LU604_08595 NZ_CP089942.1 Protein Homology CDS 1615076 1615768 . - 0 ID=cds-WP_016189892.1;Parent=gene-LU604_RS08595;Dbxref=Genbank:WP_016189892.1;Name=WP_016189892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202992.1;locus_tag=LU604_RS08595;product=CidB/LrgB family autolysis modulator;protein_id=WP_016189892.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1615761 1616156 . - . ID=gene-LU604_RS08600;Name=LU604_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08600;old_locus_tag=LU604_08600 NZ_CP089942.1 Protein Homology CDS 1615761 1616156 . - 0 ID=cds-WP_016189891.1;Parent=gene-LU604_RS08600;Dbxref=Genbank:WP_016189891.1;Name=WP_016189891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202991.1;locus_tag=LU604_RS08600;product=CidA/LrgA family protein;protein_id=WP_016189891.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1616306 1618339 . - . ID=gene-LU604_RS08605;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=LU604_RS08605;old_locus_tag=LU604_08605 NZ_CP089942.1 Protein Homology CDS 1616306 1618339 . - 0 ID=cds-WP_233480378.1;Parent=gene-LU604_RS08605;Dbxref=Genbank:WP_233480378.1;Name=WP_233480378.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189890.1;locus_tag=LU604_RS08605;product=methionine--tRNA ligase;protein_id=WP_233480378.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1618508 1619617 . + . ID=gene-LU604_RS08610;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=LU604_RS08610;old_locus_tag=LU604_08610 NZ_CP089942.1 Protein Homology CDS 1618508 1619617 . + 0 ID=cds-WP_016189889.1;Parent=gene-LU604_RS08610;Dbxref=Genbank:WP_016189889.1;Name=WP_016189889.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202989.1;locus_tag=LU604_RS08610;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_016189889.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1619636 1619842 . + . ID=gene-LU604_RS08615;Name=LU604_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08615;old_locus_tag=LU604_08615 NZ_CP089942.1 GeneMarkS-2+ CDS 1619636 1619842 . + 0 ID=cds-WP_152664180.1;Parent=gene-LU604_RS08615;Dbxref=Genbank:WP_152664180.1;Name=WP_152664180.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08615;product=hypothetical protein;protein_id=WP_152664180.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1619839 1620456 . + . ID=gene-LU604_RS08620;Name=LU604_RS08620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08620;old_locus_tag=LU604_08620;pseudo=true NZ_CP089942.1 Protein Homology CDS 1619839 1620456 . + 0 ID=cds-LU604_RS08620;Parent=gene-LU604_RS08620;Note=frameshifted%3B internal stop;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172949.1;locus_tag=LU604_RS08620;product=hydroxyethylthiazole kinase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1620563 1621363 . + . ID=gene-LU604_RS08625;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=LU604_RS08625;old_locus_tag=LU604_08625 NZ_CP089942.1 Protein Homology CDS 1620563 1621363 . + 0 ID=cds-WP_233480380.1;Parent=gene-LU604_RS08625;Dbxref=Genbank:WP_233480380.1;Name=WP_233480380.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310933.1;locus_tag=LU604_RS08625;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_233480380.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1621405 1621566 . + . ID=gene-LU604_RS08630;Name=LU604_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08630;old_locus_tag=LU604_08630 NZ_CP089942.1 Protein Homology CDS 1621405 1621566 . + 0 ID=cds-WP_233480381.1;Parent=gene-LU604_RS08630;Dbxref=Genbank:WP_233480381.1;Name=WP_233480381.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013720.2;locus_tag=LU604_RS08630;product=hypothetical protein;protein_id=WP_233480381.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1621570 1621782 . + . ID=gene-LU604_RS08635;Name=LU604_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08635;old_locus_tag=LU604_08635 NZ_CP089942.1 GeneMarkS-2+ CDS 1621570 1621782 . + 0 ID=cds-WP_040465294.1;Parent=gene-LU604_RS08635;Dbxref=Genbank:WP_040465294.1;Name=WP_040465294.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08635;product=hypothetical protein;protein_id=WP_040465294.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1621908 1622054 . - . ID=gene-LU604_RS08640;Name=LU604_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08640;old_locus_tag=LU604_08640 NZ_CP089942.1 GeneMarkS-2+ CDS 1621908 1622054 . - 0 ID=cds-WP_233480382.1;Parent=gene-LU604_RS08640;Dbxref=Genbank:WP_233480382.1;Name=WP_233480382.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08640;product=hypothetical protein;protein_id=WP_233480382.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1622220 1622891 . + . ID=gene-LU604_RS08645;Name=LU604_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08645;old_locus_tag=LU604_08645 NZ_CP089942.1 Protein Homology CDS 1622220 1622891 . + 0 ID=cds-WP_233480383.1;Parent=gene-LU604_RS08645;Dbxref=Genbank:WP_233480383.1;Name=WP_233480383.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014427.2;locus_tag=LU604_RS08645;product=Ig-like domain-containing protein;protein_id=WP_233480383.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1622900 1623226 . - . ID=gene-LU604_RS08650;Name=LU604_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08650;old_locus_tag=LU604_08650 NZ_CP089942.1 Protein Homology CDS 1622900 1623226 . - 0 ID=cds-WP_233480384.1;Parent=gene-LU604_RS08650;Dbxref=Genbank:WP_233480384.1;Name=WP_233480384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078280.1;locus_tag=LU604_RS08650;product=DUF1493 family protein;protein_id=WP_233480384.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1623485 1623800 . + . ID=gene-LU604_RS08655;Name=LU604_RS08655;end_range=1623800,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08655;old_locus_tag=LU604_08655;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1623485 1623800 . + 0 ID=cds-LU604_RS08655;Parent=gene-LU604_RS08655;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1623800,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU604_RS08655;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1623967 1624353 . + . ID=gene-LU604_RS08660;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS08660;old_locus_tag=LU604_08660;pseudo=true NZ_CP089942.1 Protein Homology CDS 1623967 1624353 . + 0 ID=cds-LU604_RS08660;Parent=gene-LU604_RS08660;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU604_RS08660;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1624429 1624824 . + . ID=gene-LU604_RS08665;Name=LU604_RS08665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08665;old_locus_tag=LU604_08665;partial=true;pseudo=true;start_range=.,1624429 NZ_CP089942.1 Protein Homology CDS 1624429 1624824 . + 0 ID=cds-LU604_RS08665;Parent=gene-LU604_RS08665;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU604_RS08665;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,1624429;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1624847 1625095 . + . ID=gene-LU604_RS08670;Name=LU604_RS08670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08670;old_locus_tag=LU604_08670;partial=true;pseudo=true;start_range=.,1624847 NZ_CP089942.1 Protein Homology CDS 1624847 1625095 . + 0 ID=cds-LU604_RS08670;Parent=gene-LU604_RS08670;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014611549.1;locus_tag=LU604_RS08670;partial=true;product=Hin recombinase;pseudo=true;start_range=.,1624847;transl_table=11 NZ_CP089942.1 RefSeq gene 1625169 1625930 . + . ID=gene-LU604_RS08675;Name=LU604_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08675;old_locus_tag=LU604_08675 NZ_CP089942.1 GeneMarkS-2+ CDS 1625169 1625930 . + 0 ID=cds-WP_233480385.1;Parent=gene-LU604_RS08675;Dbxref=Genbank:WP_233480385.1;Name=WP_233480385.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08675;product=hypothetical protein;protein_id=WP_233480385.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1626229 1627539 . + . ID=gene-LU604_RS08680;Name=LU604_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08680;old_locus_tag=LU604_08680 NZ_CP089942.1 Protein Homology CDS 1626229 1627539 . + 0 ID=cds-WP_233480386.1;Parent=gene-LU604_RS08680;Dbxref=Genbank:WP_233480386.1;Name=WP_233480386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189879.1;locus_tag=LU604_RS08680;product=T3SS effector OspC family protein;protein_id=WP_233480386.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1627590 1628180 . - . ID=gene-LU604_RS08685;Name=LU604_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08685;old_locus_tag=LU604_08685 NZ_CP089942.1 Protein Homology CDS 1627590 1628180 . - 0 ID=cds-WP_233480387.1;Parent=gene-LU604_RS08685;Dbxref=Genbank:WP_233480387.1;Name=WP_233480387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189878.1;locus_tag=LU604_RS08685;product=recombinase family protein;protein_id=WP_233480387.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1628309 1628572 . - . ID=gene-LU604_RS08690;Name=LU604_RS08690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08690;old_locus_tag=LU604_08690;partial=true;pseudo=true;start_range=.,1628309 NZ_CP089942.1 Protein Homology CDS 1628309 1628572 . - 0 ID=cds-LU604_RS08690;Parent=gene-LU604_RS08690;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012472779.1;locus_tag=LU604_RS08690;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,1628309;transl_table=11 NZ_CP089942.1 RefSeq gene 1629250 1630152 . - . ID=gene-LU604_RS08695;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=LU604_RS08695;old_locus_tag=LU604_08695 NZ_CP089942.1 Protein Homology CDS 1629250 1630152 . - 0 ID=cds-WP_233481554.1;Parent=gene-LU604_RS08695;Dbxref=Genbank:WP_233481554.1;Name=WP_233481554.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667690.1;locus_tag=LU604_RS08695;product=lipid kinase YegS;protein_id=WP_233481554.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1630355 1631731 . - . ID=gene-LU604_RS08700;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=LU604_RS08700;old_locus_tag=LU604_08700 NZ_CP089942.1 Protein Homology CDS 1630355 1631731 . - 0 ID=cds-WP_233480389.1;Parent=gene-LU604_RS08700;Dbxref=Genbank:WP_233480389.1;Name=WP_233480389.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189875.1;locus_tag=LU604_RS08700;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_233480389.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1631887 1632588 . - . ID=gene-LU604_RS08705;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=LU604_RS08705;old_locus_tag=LU604_08705 NZ_CP089942.1 Protein Homology CDS 1631887 1632588 . - 0 ID=cds-WP_016189874.1;Parent=gene-LU604_RS08705;Dbxref=Genbank:WP_016189874.1;Name=WP_016189874.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106531.1;locus_tag=LU604_RS08705;product=two-component system response regulator BaeR;protein_id=WP_016189874.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1632626 1634011 . - . ID=gene-LU604_RS08710;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=LU604_RS08710;old_locus_tag=LU604_08710 NZ_CP089942.1 Protein Homology CDS 1632626 1634011 . - 0 ID=cds-WP_233480759.1;Parent=gene-LU604_RS08710;Dbxref=Genbank:WP_233480759.1;Name=WP_233480759.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004164443.1;locus_tag=LU604_RS08710;product=two-component system sensor histidine kinase BaeS;protein_id=WP_233480759.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1634011 1635331 . - . ID=gene-LU604_RS08715;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=pseudogene;locus_tag=LU604_RS08715;old_locus_tag=LU604_08715;pseudo=true NZ_CP089942.1 Protein Homology CDS 1634011 1635331 . - 0 ID=cds-LU604_RS08715;Parent=gene-LU604_RS08715;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137816.1;locus_tag=LU604_RS08715;product=multidrug transporter subunit MdtD;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1635412 1638486 . - . ID=gene-LU604_RS08720;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=LU604_RS08720;old_locus_tag=LU604_08720 NZ_CP089942.1 Protein Homology CDS 1635412 1638486 . - 0 ID=cds-WP_233480390.1;Parent=gene-LU604_RS08720;Dbxref=Genbank:WP_233480390.1;Name=WP_233480390.1;Ontology_term=GO:0055085;gbkey=CDS;gene=mdtC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189870.1;locus_tag=LU604_RS08720;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_233480390.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1638483 1641608 . - . ID=gene-LU604_RS08725;Name=LU604_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08725;old_locus_tag=LU604_08725 NZ_CP089942.1 Protein Homology CDS 1638483 1641608 . - 0 ID=cds-WP_233480391.1;Parent=gene-LU604_RS08725;Dbxref=Genbank:WP_233480391.1;Name=WP_233480391.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189869.1;locus_tag=LU604_RS08725;product=MdtB/MuxB family multidrug efflux RND transporter permease subunit;protein_id=WP_233480391.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1641608 1642834 . - . ID=gene-LU604_RS08730;Name=LU604_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08730;old_locus_tag=LU604_08730 NZ_CP089942.1 Protein Homology CDS 1641608 1642834 . - 0 ID=cds-WP_233480392.1;Parent=gene-LU604_RS08730;Dbxref=Genbank:WP_233480392.1;Name=WP_233480392.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189868.1;locus_tag=LU604_RS08730;product=MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit;protein_id=WP_233480392.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1643062 1644021 . + . ID=gene-LU604_RS08735;Name=LU604_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08735;old_locus_tag=LU604_08735 NZ_CP089942.1 Protein Homology CDS 1643062 1644021 . + 0 ID=cds-WP_233480393.1;Parent=gene-LU604_RS08735;Dbxref=Genbank:WP_233480393.1;Name=WP_233480393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024275.1;locus_tag=LU604_RS08735;product=aldo/keto reductase;protein_id=WP_233480393.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1644107 1645459 . - . ID=gene-LU604_RS08740;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=LU604_RS08740;old_locus_tag=LU604_08740 NZ_CP089942.1 Protein Homology CDS 1644107 1645459 . - 0 ID=cds-WP_233480394.1;Parent=gene-LU604_RS08740;Dbxref=Genbank:WP_233480394.1;Name=WP_233480394.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001633127.1;locus_tag=LU604_RS08740;product=molecular chaperone;protein_id=WP_233480394.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1645639 1646049 . - . ID=gene-LU604_RS08745;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS08745;old_locus_tag=LU604_08745 NZ_CP089942.1 Protein Homology CDS 1645639 1646049 . - 0 ID=cds-WP_233480395.1;Parent=gene-LU604_RS08745;Dbxref=Genbank:WP_233480395.1;Name=WP_233480395.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU604_RS08745;product=IS200/IS605 family transposase;protein_id=WP_233480395.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1646415 1646504 . - . ID=gene-LU604_RS08750;Name=LU604_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08750;old_locus_tag=LU604_08750 NZ_CP089942.1 Protein Homology CDS 1646415 1646504 . - 0 ID=cds-WP_233480396.1;Parent=gene-LU604_RS08750;Dbxref=Genbank:WP_233480396.1;Name=WP_233480396.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=LU604_RS08750;product=diguanylate cyclase;protein_id=WP_233480396.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1646522 1646722 . - . ID=gene-LU604_RS08755;Name=LU604_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08755;old_locus_tag=LU604_08755 NZ_CP089942.1 Protein Homology CDS 1646522 1646722 . - 0 ID=cds-WP_233480397.1;Parent=gene-LU604_RS08755;Dbxref=Genbank:WP_233480397.1;Name=WP_233480397.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=LU604_RS08755;product=diguanylate cyclase;protein_id=WP_233480397.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1646652 1646846 . - . ID=gene-LU604_RS08760;Name=LU604_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08760;old_locus_tag=LU604_08760 NZ_CP089942.1 Protein Homology CDS 1646652 1646846 . - 0 ID=cds-WP_232426825.1;Parent=gene-LU604_RS08760;Dbxref=Genbank:WP_232426825.1;Name=WP_232426825.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00229.1;locus_tag=LU604_RS08760;product=PAS domain S-box protein;protein_id=WP_232426825.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1646904 1647083 . - . ID=gene-LU604_RS08765;Name=LU604_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08765;old_locus_tag=LU604_08765 NZ_CP089942.1 GeneMarkS-2+ CDS 1646904 1647083 . - 0 ID=cds-WP_232426804.1;Parent=gene-LU604_RS08765;Dbxref=Genbank:WP_232426804.1;Name=WP_232426804.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08765;product=hypothetical protein;protein_id=WP_232426804.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1647172 1647321 . - . ID=gene-LU604_RS08770;Name=LU604_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08770;old_locus_tag=LU604_08770 NZ_CP089942.1 GeneMarkS-2+ CDS 1647172 1647321 . - 0 ID=cds-WP_233481555.1;Parent=gene-LU604_RS08770;Dbxref=Genbank:WP_233481555.1;Name=WP_233481555.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08770;product=hypothetical protein;protein_id=WP_233481555.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1647832 1648428 . - . ID=gene-LU604_RS08775;Name=LU604_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08775;old_locus_tag=LU604_08775 NZ_CP089942.1 Protein Homology CDS 1647832 1648428 . - 0 ID=cds-WP_233480760.1;Parent=gene-LU604_RS08775;Dbxref=Genbank:WP_233480760.1;Name=WP_233480760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189861.1;locus_tag=LU604_RS08775;product=phosphatase PAP2 family protein;protein_id=WP_233480760.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1648675 1649316 . + . ID=gene-LU604_RS08780;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=LU604_RS08780;old_locus_tag=LU604_08780 NZ_CP089942.1 Protein Homology CDS 1648675 1649316 . + 0 ID=cds-WP_233480399.1;Parent=gene-LU604_RS08780;Dbxref=Genbank:WP_233480399.1;Name=WP_233480399.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211872.1;locus_tag=LU604_RS08780;product=uridine kinase;protein_id=WP_233480399.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1649423 1650004 . + . ID=gene-LU604_RS08785;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=LU604_RS08785;old_locus_tag=LU604_08785 NZ_CP089942.1 Protein Homology CDS 1649423 1650004 . + 0 ID=cds-WP_016189859.1;Parent=gene-LU604_RS08785;Dbxref=Genbank:WP_016189859.1;Name=WP_016189859.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=LU604_RS08785;product=dCTP deaminase;protein_id=WP_016189859.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1650069 1651874 . + . ID=gene-LU604_RS08790;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=LU604_RS08790;old_locus_tag=LU604_08790 NZ_CP089942.1 Protein Homology CDS 1650069 1651874 . + 0 ID=cds-WP_040465389.1;Parent=gene-LU604_RS08790;Dbxref=Genbank:WP_040465389.1;Name=WP_040465389.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202962.1;locus_tag=LU604_RS08790;product=outer membrane assembly protein AsmA;protein_id=WP_040465389.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1651979 1652360 . - . ID=gene-LU604_RS08795;Name=LU604_RS08795;end_range=1652360,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08795;old_locus_tag=LU604_08795;partial=true;pseudo=true;start_range=.,1651979 NZ_CP089942.1 Protein Homology CDS 1651979 1652360 . - 0 ID=cds-LU604_RS08795;Parent=gene-LU604_RS08795;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1652360,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004386758.1;locus_tag=LU604_RS08795;partial=true;product=CBS domain-containing protein;pseudo=true;start_range=.,1651979;transl_table=11 NZ_CP089942.1 RefSeq gene 1652488 1653185 . + . ID=gene-LU604_RS08800;Name=LU604_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08800;old_locus_tag=LU604_08800 NZ_CP089942.1 Protein Homology CDS 1652488 1652737 . + 0 ID=cds-WP_233481556.1;Parent=gene-LU604_RS08800;Dbxref=Genbank:WP_233481556.1;Name=WP_233481556.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS08800;product=IS1 family transposase;protein_id=WP_233481556.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 1652737 1653185 . + 2 ID=cds-WP_233481556.1;Parent=gene-LU604_RS08800;Dbxref=Genbank:WP_233481556.1;Name=WP_233481556.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS08800;product=IS1 family transposase;protein_id=WP_233481556.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1653912 1655345 . + . ID=gene-LU604_RS08805;Name=wbaP;gbkey=Gene;gene=wbaP;gene_biotype=protein_coding;locus_tag=LU604_RS08805;old_locus_tag=LU604_08805 NZ_CP089942.1 Protein Homology CDS 1653912 1655345 . + 0 ID=cds-WP_233480401.1;Parent=gene-LU604_RS08805;Dbxref=Genbank:WP_233480401.1;Name=WP_233480401.1;Ontology_term=GO:0000271,GO:0016740,GO:0016020;gbkey=CDS;gene=wbaP;go_component=membrane|0016020||IEA;go_function=transferase activity|0016740||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158333.1;locus_tag=LU604_RS08805;product=undecaprenyl-phosphate galactose phosphotransferase WbaP;protein_id=WP_233480401.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1655613 1656746 . + . ID=gene-LU604_RS08810;Name=LU604_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08810;old_locus_tag=LU604_08810 NZ_CP089942.1 Protein Homology CDS 1655613 1656746 . + 0 ID=cds-WP_016189854.1;Parent=gene-LU604_RS08810;Dbxref=Genbank:WP_016189854.1;Name=WP_016189854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000978094.1;locus_tag=LU604_RS08810;product=polysaccharide export protein;protein_id=WP_016189854.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1656762 1657196 . + . ID=gene-LU604_RS08815;Name=LU604_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08815;old_locus_tag=LU604_08815 NZ_CP089942.1 Protein Homology CDS 1656762 1657196 . + 0 ID=cds-WP_233480402.1;Parent=gene-LU604_RS08815;Dbxref=Genbank:WP_233480402.1;Name=WP_233480402.1;Note=Wzb shows phosphatase activity towards the autophosphorylated Wzc protein%2C which induces colanic acid biosynthesis%3B catalyzes the phosphorylation of UDP-glucose dehydrogenase%2C an enzyme involved in colanic acid biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667708.1;locus_tag=LU604_RS08815;product=protein tyrosine phosphatase;protein_id=WP_233480402.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1657209 1659392 . + . ID=gene-LU604_RS08820;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=LU604_RS08820;old_locus_tag=LU604_08820 NZ_CP089942.1 Protein Homology CDS 1657209 1659392 . + 0 ID=cds-WP_233480403.1;Parent=gene-LU604_RS08820;Dbxref=Genbank:WP_233480403.1;Name=WP_233480403.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014538791.1;locus_tag=LU604_RS08820;product=tyrosine-protein kinase Wzc;protein_id=WP_233480403.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1659497 1660402 . + . ID=gene-LU604_RS08825;Name=LU604_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08825;old_locus_tag=LU604_08825 NZ_CP089942.1 Protein Homology CDS 1659497 1660402 . + 0 ID=cds-WP_233480404.1;Parent=gene-LU604_RS08825;Dbxref=Genbank:WP_233480404.1;Name=WP_233480404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189851.1;locus_tag=LU604_RS08825;product=glycosyltransferase family 2 protein;protein_id=WP_233480404.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1660446 1661573 . + . ID=gene-LU604_RS08830;Name=LU604_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08830;old_locus_tag=LU604_08830 NZ_CP089942.1 Protein Homology CDS 1660446 1661573 . + 0 ID=cds-WP_233480405.1;Parent=gene-LU604_RS08830;Dbxref=Genbank:WP_233480405.1;Name=WP_233480405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189850.1;locus_tag=LU604_RS08830;product=EpsG family protein;protein_id=WP_233480405.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1661641 1662393 . + . ID=gene-LU604_RS08835;Name=LU604_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08835;old_locus_tag=LU604_08835 NZ_CP089942.1 Protein Homology CDS 1661641 1662393 . + 0 ID=cds-WP_016189849.1;Parent=gene-LU604_RS08835;Dbxref=Genbank:WP_016189849.1;Name=WP_016189849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358461.1;locus_tag=LU604_RS08835;product=glycosyltransferase family 2 protein;protein_id=WP_016189849.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1662512 1663546 . + . ID=gene-LU604_RS08840;Name=LU604_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08840;old_locus_tag=LU604_08840 NZ_CP089942.1 Protein Homology CDS 1662512 1663546 . + 0 ID=cds-WP_233480406.1;Parent=gene-LU604_RS08840;Dbxref=Genbank:WP_233480406.1;Name=WP_233480406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006119866.1;locus_tag=LU604_RS08840;product=glycosyltransferase;protein_id=WP_233480406.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1663729 1665945 . + . ID=gene-LU604_RS08845;Name=LU604_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08845;old_locus_tag=LU604_08845 NZ_CP089942.1 Protein Homology CDS 1663729 1665945 . + 0 ID=cds-WP_233480407.1;Parent=gene-LU604_RS08845;Dbxref=Genbank:WP_233480407.1;Name=WP_233480407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189847.1;locus_tag=LU604_RS08845;product=phage tailspike protein;protein_id=WP_233480407.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1666094 1667341 . + . ID=gene-LU604_RS08850;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=LU604_RS08850;old_locus_tag=LU604_08850 NZ_CP089942.1 Protein Homology CDS 1666094 1667341 . + 0 ID=cds-WP_233480408.1;Parent=gene-LU604_RS08850;Dbxref=Genbank:WP_233480408.1;Name=WP_233480408.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170200.1;locus_tag=LU604_RS08850;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_233480408.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1667346 1668569 . + . ID=gene-LU604_RS08855;Name=LU604_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08855;old_locus_tag=LU604_08855 NZ_CP089942.1 Protein Homology CDS 1667346 1668569 . + 0 ID=cds-WP_233480409.1;Parent=gene-LU604_RS08855;Dbxref=Genbank:WP_233480409.1;Name=WP_233480409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158313.1;locus_tag=LU604_RS08855;product=glycosyltransferase;protein_id=WP_233480409.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1668566 1669906 . + . ID=gene-LU604_RS08860;Name=LU604_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08860;old_locus_tag=LU604_08860 NZ_CP089942.1 Protein Homology CDS 1668566 1669906 . + 0 ID=cds-WP_233480410.1;Parent=gene-LU604_RS08860;Dbxref=Genbank:WP_233480410.1;Name=WP_233480410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667717.1;locus_tag=LU604_RS08860;product=lipopolysaccharide biosynthesis protein;protein_id=WP_233480410.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1670100 1670996 . + . ID=gene-LU604_RS08865;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=LU604_RS08865;old_locus_tag=LU604_08865 NZ_CP089942.1 Protein Homology CDS 1670100 1670996 . + 0 ID=cds-WP_233480411.1;Parent=gene-LU604_RS08865;Dbxref=Genbank:WP_233480411.1;Name=WP_233480411.1;gbkey=CDS;gene=galF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000183060.1;locus_tag=LU604_RS08865;product=UTP--glucose-1-phosphate uridylyltransferase GalF;protein_id=WP_233480411.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1671049 1672062 . + . ID=gene-LU604_RS08870;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=LU604_RS08870;old_locus_tag=LU604_08870 NZ_CP089942.1 Protein Homology CDS 1671049 1672062 . + 0 ID=cds-WP_016189842.1;Parent=gene-LU604_RS08870;Dbxref=Genbank:WP_016189842.1;Name=WP_016189842.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006119856.1;locus_tag=LU604_RS08870;product=UDP-glucose 4-epimerase GalE;protein_id=WP_016189842.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1672782 1673567 . - . ID=gene-LU604_RS08875;Name=LU604_RS08875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08875;old_locus_tag=LU604_08875;partial=true;pseudo=true;start_range=.,1672782 NZ_CP089942.1 Protein Homology CDS 1672782 1673567 . - 0 ID=cds-LU604_RS08875;Parent=gene-LU604_RS08875;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS08875;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,1672782;transl_table=11 NZ_CP089942.1 RefSeq gene 1673597 1673995 . - . ID=gene-LU604_RS08880;Name=LU604_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08880;old_locus_tag=LU604_08880 NZ_CP089942.1 GeneMarkS-2+ CDS 1673597 1673995 . - 0 ID=cds-WP_016189838.1;Parent=gene-LU604_RS08880;Dbxref=Genbank:WP_016189838.1;Name=WP_016189838.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08880;product=hypothetical protein;protein_id=WP_016189838.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1674906 1677718 . + . ID=gene-LU604_RS08885;Name=LU604_RS08885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08885;old_locus_tag=LU604_08885;partial=true;pseudo=true;start_range=.,1674906 NZ_CP089942.1 Protein Homology CDS 1674906 1677718 . + 0 ID=cds-LU604_RS08885;Parent=gene-LU604_RS08885;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180430.1;locus_tag=LU604_RS08885;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,1674906;transl_table=11 NZ_CP089942.1 RefSeq gene 1678277 1679356 . + . ID=gene-LU604_RS08890;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=LU604_RS08890;old_locus_tag=LU604_08890 NZ_CP089942.1 Protein Homology CDS 1678277 1679356 . + 0 ID=cds-WP_016189831.1;Parent=gene-LU604_RS08890;Dbxref=Genbank:WP_016189831.1;Name=WP_016189831.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001557078.1;locus_tag=LU604_RS08890;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_016189831.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1679356 1680243 . + . ID=gene-LU604_RS08895;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=LU604_RS08895;old_locus_tag=LU604_08895 NZ_CP089942.1 Protein Homology CDS 1679356 1680243 . + 0 ID=cds-WP_016189830.1;Parent=gene-LU604_RS08895;Dbxref=Genbank:WP_016189830.1;Name=WP_016189830.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202943.1;locus_tag=LU604_RS08895;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_016189830.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1680291 1681172 . + . ID=gene-LU604_RS08900;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=LU604_RS08900;old_locus_tag=LU604_08900 NZ_CP089942.1 Protein Homology CDS 1680291 1681172 . + 0 ID=cds-WP_233480412.1;Parent=gene-LU604_RS08900;Dbxref=Genbank:WP_233480412.1;Name=WP_233480412.1;Ontology_term=GO:0009243,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189829.1;locus_tag=LU604_RS08900;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_233480412.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1681175 1681720 . + . ID=gene-LU604_RS08905;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=LU604_RS08905;old_locus_tag=LU604_08905 NZ_CP089942.1 Protein Homology CDS 1681175 1681720 . + 0 ID=cds-WP_016189828.1;Parent=gene-LU604_RS08905;Dbxref=Genbank:WP_016189828.1;Name=WP_016189828.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001100788.1;locus_tag=LU604_RS08905;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_016189828.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1681863 1682804 . + . ID=gene-LU604_RS08910;Name=LU604_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08910;old_locus_tag=LU604_08910 NZ_CP089942.1 Protein Homology CDS 1681863 1682804 . + 0 ID=cds-WP_046371948.1;Parent=gene-LU604_RS08910;Dbxref=Genbank:WP_046371948.1;Name=WP_046371948.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025025.2;locus_tag=LU604_RS08910;product=glycosyltransferase family 2 protein;protein_id=WP_046371948.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1682834 1684129 . + . ID=gene-LU604_RS08915;Name=LU604_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08915;old_locus_tag=LU604_08915 NZ_CP089942.1 Protein Homology CDS 1682834 1684129 . + 0 ID=cds-WP_233480413.1;Parent=gene-LU604_RS08915;Dbxref=Genbank:WP_233480413.1;Name=WP_233480413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189826.1;locus_tag=LU604_RS08915;product=hypothetical protein;protein_id=WP_233480413.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1684205 1684930 . + . ID=gene-LU604_RS08920;Name=LU604_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08920;old_locus_tag=LU604_08920 NZ_CP089942.1 Protein Homology CDS 1684205 1684930 . + 0 ID=cds-WP_233480414.1;Parent=gene-LU604_RS08920;Dbxref=Genbank:WP_233480414.1;Name=WP_233480414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509732.1;locus_tag=LU604_RS08920;product=ABC transporter permease;protein_id=WP_233480414.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1684938 1685702 . + . ID=gene-LU604_RS08925;Name=LU604_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08925;old_locus_tag=LU604_08925 NZ_CP089942.1 Protein Homology CDS 1684938 1685702 . + 0 ID=cds-WP_233480415.1;Parent=gene-LU604_RS08925;Dbxref=Genbank:WP_233480415.1;Name=WP_233480415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189824.1;locus_tag=LU604_RS08925;product=ABC transporter ATP-binding protein;protein_id=WP_233480415.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1685887 1687293 . + . ID=gene-LU604_RS08930;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=LU604_RS08930;old_locus_tag=LU604_08930 NZ_CP089942.1 Protein Homology CDS 1685887 1687293 . + 0 ID=cds-WP_233480416.1;Parent=gene-LU604_RS08930;Dbxref=Genbank:WP_233480416.1;Name=WP_233480416.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004571305.1;locus_tag=LU604_RS08930;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_233480416.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1687451 1687867 . + . ID=gene-LU604_RS08935;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS08935;old_locus_tag=LU604_08935 NZ_CP089942.1 Protein Homology CDS 1687451 1687867 . + 0 ID=cds-WP_233480417.1;Parent=gene-LU604_RS08935;Dbxref=Genbank:WP_233480417.1;Name=WP_233480417.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190995.1;locus_tag=LU604_RS08935;product=IS200/IS605 family transposase;protein_id=WP_233480417.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1688632 1689422 . + . ID=gene-LU604_RS08940;Name=LU604_RS08940;end_range=1689422,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS08940;old_locus_tag=LU604_08940;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1688632 1689422 . + 0 ID=cds-LU604_RS08940;Parent=gene-LU604_RS08940;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1689422,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS08940;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1689464 1689862 . + . ID=gene-LU604_RS08945;Name=LU604_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08945;old_locus_tag=LU604_08945 NZ_CP089942.1 GeneMarkS-2+ CDS 1689464 1689862 . + 0 ID=cds-WP_233480900.1;Parent=gene-LU604_RS08945;Dbxref=Genbank:WP_233480900.1;Name=WP_233480900.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08945;product=hypothetical protein;protein_id=WP_233480900.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1689950 1690261 . + . ID=gene-LU604_RS08950;Name=LU604_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS08950;old_locus_tag=LU604_08950 NZ_CP089942.1 GeneMarkS-2+ CDS 1689950 1690261 . + 0 ID=cds-WP_233480418.1;Parent=gene-LU604_RS08950;Dbxref=Genbank:WP_233480418.1;Name=WP_233480418.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS08950;product=hypothetical protein;protein_id=WP_233480418.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1690584 1691195 . - . ID=gene-LU604_RS08955;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=LU604_RS08955;old_locus_tag=LU604_08955 NZ_CP089942.1 Protein Homology CDS 1690584 1691195 . - 0 ID=cds-WP_016189817.1;Parent=gene-LU604_RS08955;Dbxref=Genbank:WP_016189817.1;Name=WP_016189817.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=LU604_RS08955;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_016189817.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1691189 1691965 . - . ID=gene-LU604_RS08960;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=LU604_RS08960;old_locus_tag=LU604_08960 NZ_CP089942.1 Protein Homology CDS 1691189 1691965 . - 0 ID=cds-WP_016189816.1;Parent=gene-LU604_RS08960;Dbxref=Genbank:WP_016189816.1;Name=WP_016189816.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310853.1;locus_tag=LU604_RS08960;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_016189816.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1691947 1692684 . - . ID=gene-LU604_RS08965;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=LU604_RS08965;old_locus_tag=LU604_08965 NZ_CP089942.1 Protein Homology CDS 1691947 1692684 . - 0 ID=cds-WP_233480419.1;Parent=gene-LU604_RS08965;Dbxref=Genbank:WP_233480419.1;Name=WP_233480419.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014699664.1;locus_tag=LU604_RS08965;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_233480419.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1692690 1693280 . - . ID=gene-LU604_RS08970;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=LU604_RS08970;old_locus_tag=LU604_08970 NZ_CP089942.1 Protein Homology CDS 1692690 1693280 . - 0 ID=cds-WP_016189814.1;Parent=gene-LU604_RS08970;Dbxref=Genbank:WP_016189814.1;Name=WP_016189814.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454370.1;locus_tag=LU604_RS08970;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_016189814.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1693281 1694348 . - . ID=gene-LU604_RS08975;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=LU604_RS08975;old_locus_tag=LU604_08975 NZ_CP089942.1 Protein Homology CDS 1693281 1694348 . - 0 ID=cds-WP_233480420.1;Parent=gene-LU604_RS08975;Dbxref=Genbank:WP_233480420.1;Name=WP_233480420.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=LU604_RS08975;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_233480420.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1694345 1695436 . - . ID=gene-LU604_RS08980;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=LU604_RS08980;old_locus_tag=LU604_08980 NZ_CP089942.1 Protein Homology CDS 1694345 1695436 . - 0 ID=cds-WP_016189812.1;Parent=gene-LU604_RS08980;Dbxref=Genbank:WP_016189812.1;Name=WP_016189812.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170178.1;locus_tag=LU604_RS08980;product=histidinol-phosphate transaminase;protein_id=WP_016189812.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1695433 1696740 . - . ID=gene-LU604_RS08985;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=LU604_RS08985;old_locus_tag=LU604_08985 NZ_CP089942.1 Protein Homology CDS 1695433 1696740 . - 0 ID=cds-WP_016189811.1;Parent=gene-LU604_RS08985;Dbxref=Genbank:WP_016189811.1;Name=WP_016189811.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202926.1;locus_tag=LU604_RS08985;product=histidinol dehydrogenase;protein_id=WP_016189811.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1696744 1697643 . - . ID=gene-LU604_RS08990;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=LU604_RS08990;old_locus_tag=LU604_08990 NZ_CP089942.1 Protein Homology CDS 1696744 1697643 . - 0 ID=cds-WP_016189810.1;Parent=gene-LU604_RS08990;Dbxref=Genbank:WP_016189810.1;Name=WP_016189810.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=LU604_RS08990;product=ATP phosphoribosyltransferase;protein_id=WP_016189810.1;transl_table=11 NZ_CP089942.1 cmsearch sequence_feature 1697711 1697832 . - . ID=id-NZ_CP089942.1:1697711..1697832;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP089942.1 RefSeq gene 1697808 1697855 . - . ID=gene-LU604_RS08995;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=LU604_RS08995;old_locus_tag=LU604_08995 NZ_CP089942.1 Protein Homology CDS 1697808 1697855 . - 0 ID=cds-WP_118665699.1;Parent=gene-LU604_RS08995;Dbxref=Genbank:WP_118665699.1;Name=WP_118665699.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310846.1;locus_tag=LU604_RS08995;product=his operon leader peptide;protein_id=WP_118665699.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1698035 1698859 . + . ID=gene-LU604_RS09000;Name=LU604_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09000;old_locus_tag=LU604_09000 NZ_CP089942.1 Protein Homology CDS 1698035 1698859 . + 0 ID=cds-WP_233480421.1;Parent=gene-LU604_RS09000;Dbxref=Genbank:WP_233480421.1;Name=WP_233480421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189809.1;locus_tag=LU604_RS09000;product=SDR family oxidoreductase;protein_id=WP_233480421.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1698980 1699330 . - . ID=gene-LU604_RS09005;Name=LU604_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09005;old_locus_tag=LU604_09005 NZ_CP089942.1 GeneMarkS-2+ CDS 1698980 1699330 . - 0 ID=cds-WP_233480422.1;Parent=gene-LU604_RS09005;Dbxref=Genbank:WP_233480422.1;Name=WP_233480422.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09005;product=hypothetical protein;protein_id=WP_233480422.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1699330 1699779 . - . ID=gene-LU604_RS09010;Name=LU604_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09010;old_locus_tag=LU604_09010 NZ_CP089942.1 Protein Homology CDS 1699330 1699779 . - 0 ID=cds-WP_233480423.1;Parent=gene-LU604_RS09010;Dbxref=Genbank:WP_233480423.1;Name=WP_233480423.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LU604_RS09010;product=ATP-binding cassette domain-containing protein;protein_id=WP_233480423.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1699971 1700126 . + . ID=gene-LU604_RS09015;Name=LU604_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09015;old_locus_tag=LU604_09015 NZ_CP089942.1 Protein Homology CDS 1699971 1700126 . + 0 ID=cds-WP_233480424.1;Parent=gene-LU604_RS09015;Dbxref=Genbank:WP_233480424.1;Name=WP_233480424.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189808.1;locus_tag=LU604_RS09015;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_233480424.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1700273 1701046 . + . ID=gene-LU604_RS09020;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=LU604_RS09020;old_locus_tag=LU604_09020 NZ_CP089942.1 Protein Homology CDS 1700273 1701046 . + 0 ID=cds-WP_233480425.1;Parent=gene-LU604_RS09020;Dbxref=Genbank:WP_233480425.1;Name=WP_233480425.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189807.1;locus_tag=LU604_RS09020;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_233480425.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1701040 1701735 . + . ID=gene-LU604_RS09025;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=LU604_RS09025;old_locus_tag=LU604_09025 NZ_CP089942.1 Protein Homology CDS 1701040 1701735 . + 0 ID=cds-WP_040465288.1;Parent=gene-LU604_RS09025;Dbxref=Genbank:WP_040465288.1;Name=WP_040465288.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015700722.1;locus_tag=LU604_RS09025;product=molybdate ABC transporter permease subunit;protein_id=WP_040465288.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1701729 1702787 . + . ID=gene-LU604_RS09030;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=LU604_RS09030;old_locus_tag=LU604_09030 NZ_CP089942.1 Protein Homology CDS 1701729 1702787 . + 0 ID=cds-WP_233480426.1;Parent=gene-LU604_RS09030;Dbxref=Genbank:WP_233480426.1;Name=WP_233480426.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851877.1;locus_tag=LU604_RS09030;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_233480426.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1702854 1703270 . - . ID=gene-LU604_RS09035;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS09035;old_locus_tag=LU604_09035 NZ_CP089942.1 Protein Homology CDS 1702854 1703270 . - 0 ID=cds-WP_233479166.1;Parent=gene-LU604_RS09035;Dbxref=Genbank:WP_233479166.1;Name=WP_233479166.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368599.1;locus_tag=LU604_RS09035;product=IS200/IS605 family transposase;protein_id=WP_233479166.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1703294 1704503 . + . ID=gene-LU604_RS09040;Name=LU604_RS09040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS09040;old_locus_tag=LU604_09040;pseudo=true NZ_CP089942.1 Protein Homology CDS 1703294 1704503 . + 0 ID=cds-LU604_RS09040;Parent=gene-LU604_RS09040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368856.1;locus_tag=LU604_RS09040;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1704619 1705662 . - . ID=gene-LU604_RS09045;Name=LU604_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09045;old_locus_tag=LU604_09045 NZ_CP089942.1 GeneMarkS-2+ CDS 1704619 1705662 . - 0 ID=cds-WP_233480428.1;Parent=gene-LU604_RS09045;Dbxref=Genbank:WP_233480428.1;Name=WP_233480428.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09045;product=hypothetical protein;protein_id=WP_233480428.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1706083 1706598 . + . ID=gene-LU604_RS09050;Name=LU604_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09050;old_locus_tag=LU604_09050 NZ_CP089942.1 Protein Homology CDS 1706083 1706598 . + 0 ID=cds-WP_233480429.1;Parent=gene-LU604_RS09050;Dbxref=Genbank:WP_233480429.1;Name=WP_233480429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025391.1;locus_tag=LU604_RS09050;product=J domain-containing protein;protein_id=WP_233480429.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1706730 1707272 . + . ID=gene-LU604_RS09055;Name=LU604_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09055;old_locus_tag=LU604_09055 NZ_CP089942.1 Protein Homology CDS 1706730 1707272 . + 0 ID=cds-WP_233480430.1;Parent=gene-LU604_RS09055;Dbxref=Genbank:WP_233480430.1;Name=WP_233480430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401654.1;locus_tag=LU604_RS09055;product=hypothetical protein;protein_id=WP_233480430.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1707269 1707529 . + . ID=gene-LU604_RS09060;Name=LU604_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09060;old_locus_tag=LU604_09060 NZ_CP089942.1 GeneMarkS-2+ CDS 1707269 1707529 . + 0 ID=cds-WP_233480431.1;Parent=gene-LU604_RS09060;Dbxref=Genbank:WP_233480431.1;Name=WP_233480431.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09060;product=hypothetical protein;protein_id=WP_233480431.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1707547 1707777 . + . ID=gene-LU604_RS09065;Name=LU604_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09065;old_locus_tag=LU604_09065 NZ_CP089942.1 Protein Homology CDS 1707547 1707777 . + 0 ID=cds-WP_233480432.1;Parent=gene-LU604_RS09065;Dbxref=Genbank:WP_233480432.1;Name=WP_233480432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443238.1;locus_tag=LU604_RS09065;product=XRE family transcriptional regulator;protein_id=WP_233480432.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1708145 1708357 . + . ID=gene-LU604_RS09070;Name=LU604_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09070;old_locus_tag=LU604_09070 NZ_CP089942.1 Protein Homology CDS 1708145 1708357 . + 0 ID=cds-WP_233480433.1;Parent=gene-LU604_RS09070;Dbxref=Genbank:WP_233480433.1;Name=WP_233480433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443237.1;locus_tag=LU604_RS09070;product=hypothetical protein;protein_id=WP_233480433.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1708870 1709115 . + . ID=gene-LU604_RS09075;Name=LU604_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09075;old_locus_tag=LU604_09075 NZ_CP089942.1 Protein Homology CDS 1708870 1709115 . + 0 ID=cds-WP_233480434.1;Parent=gene-LU604_RS09075;Dbxref=Genbank:WP_233480434.1;Name=WP_233480434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001623606.1;locus_tag=LU604_RS09075;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WP_233480434.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1709115 1709432 . + . ID=gene-LU604_RS09080;Name=LU604_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09080;old_locus_tag=LU604_09080 NZ_CP089942.1 Protein Homology CDS 1709115 1709432 . + 0 ID=cds-WP_233480435.1;Parent=gene-LU604_RS09080;Dbxref=Genbank:WP_233480435.1;Name=WP_233480435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001623607.1;locus_tag=LU604_RS09080;product=CcdB family protein;protein_id=WP_233480435.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1709452 1709649 . + . ID=gene-LU604_RS09085;Name=LU604_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09085;old_locus_tag=LU604_09085 NZ_CP089942.1 GeneMarkS-2+ CDS 1709452 1709649 . + 0 ID=cds-WP_233480436.1;Parent=gene-LU604_RS09085;Dbxref=Genbank:WP_233480436.1;Name=WP_233480436.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09085;product=hypothetical protein;protein_id=WP_233480436.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1710128 1711366 . - . ID=gene-LU604_RS09090;Name=LU604_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09090;old_locus_tag=LU604_09090 NZ_CP089942.1 Protein Homology CDS 1710128 1711366 . - 0 ID=cds-WP_233481557.1;Parent=gene-LU604_RS09090;Dbxref=Genbank:WP_233481557.1;Name=WP_233481557.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU604_RS09090;product=IS91 family transposase;protein_id=WP_233481557.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1711537 1711842 . - . ID=gene-LU604_RS09095;Name=LU604_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09095;old_locus_tag=LU604_09095 NZ_CP089942.1 GeneMarkS-2+ CDS 1711537 1711842 . - 0 ID=cds-WP_233480438.1;Parent=gene-LU604_RS09095;Dbxref=Genbank:WP_233480438.1;Name=WP_233480438.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09095;product=hypothetical protein;protein_id=WP_233480438.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1711799 1712668 . - . ID=gene-LU604_RS09100;Name=LU604_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09100;old_locus_tag=LU604_09100 NZ_CP089942.1 GeneMarkS-2+ CDS 1711799 1712668 . - 0 ID=cds-WP_233480439.1;Parent=gene-LU604_RS09100;Dbxref=Genbank:WP_233480439.1;Name=WP_233480439.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09100;product=hypothetical protein;protein_id=WP_233480439.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1712971 1713159 . - . ID=gene-LU604_RS09105;Name=LU604_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09105;old_locus_tag=LU604_09105 NZ_CP089942.1 GeneMarkS-2+ CDS 1712971 1713159 . - 0 ID=cds-WP_233480440.1;Parent=gene-LU604_RS09105;Dbxref=Genbank:WP_233480440.1;Name=WP_233480440.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09105;product=hypothetical protein;protein_id=WP_233480440.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1713291 1713707 . - . ID=gene-LU604_RS09110;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS09110;old_locus_tag=LU604_09110 NZ_CP089942.1 Protein Homology CDS 1713291 1713707 . - 0 ID=cds-WP_233479029.1;Parent=gene-LU604_RS09110;Dbxref=Genbank:WP_233479029.1;Name=WP_233479029.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368599.1;locus_tag=LU604_RS09110;product=IS200/IS605 family transposase;protein_id=WP_233479029.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1713731 1714939 . + . ID=gene-LU604_RS09115;Name=LU604_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09115;old_locus_tag=LU604_09115 NZ_CP089942.1 Protein Homology CDS 1713731 1714939 . + 0 ID=cds-WP_233481558.1;Parent=gene-LU604_RS09115;Dbxref=Genbank:WP_233481558.1;Name=WP_233481558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368856.1;locus_tag=LU604_RS09115;product=transposase;protein_id=WP_233481558.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1714979 1715797 . - . ID=gene-LU604_RS09120;Name=LU604_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09120;old_locus_tag=LU604_09120 NZ_CP089942.1 Protein Homology CDS 1714979 1715797 . - 0 ID=cds-WP_016189804.1;Parent=gene-LU604_RS09120;Dbxref=Genbank:WP_016189804.1;Name=WP_016189804.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001300666.1;locus_tag=LU604_RS09120;product=pyridoxal phosphatase;protein_id=WP_016189804.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1715945 1716940 . + . ID=gene-LU604_RS09125;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=LU604_RS09125;old_locus_tag=LU604_09125 NZ_CP089942.1 Protein Homology CDS 1715945 1716940 . + 0 ID=cds-WP_233480441.1;Parent=gene-LU604_RS09125;Dbxref=Genbank:WP_233480441.1;Name=WP_233480441.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189803.1;locus_tag=LU604_RS09125;product=6-phosphogluconolactonase;protein_id=WP_233480441.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1716984 1717472 . - . ID=gene-LU604_RS09130;Name=LU604_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09130;old_locus_tag=LU604_09130 NZ_CP089942.1 Protein Homology CDS 1716984 1717472 . - 0 ID=cds-WP_233480442.1;Parent=gene-LU604_RS09130;Dbxref=Genbank:WP_233480442.1;Name=WP_233480442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189802.1;locus_tag=LU604_RS09130;product=kinase inhibitor;protein_id=WP_233480442.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1717488 1718168 . - . ID=gene-LU604_RS09135;Name=LU604_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09135;old_locus_tag=LU604_09135 NZ_CP089942.1 Protein Homology CDS 1717488 1718168 . - 0 ID=cds-WP_233480443.1;Parent=gene-LU604_RS09135;Dbxref=Genbank:WP_233480443.1;Name=WP_233480443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189801.1;locus_tag=LU604_RS09135;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_233480443.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1718179 1719222 . - . ID=gene-LU604_RS09140;Name=LU604_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09140;old_locus_tag=LU604_09140 NZ_CP089942.1 Protein Homology CDS 1718179 1719222 . - 0 ID=cds-WP_233480444.1;Parent=gene-LU604_RS09140;Dbxref=Genbank:WP_233480444.1;Name=WP_233480444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189800.1;locus_tag=LU604_RS09140;product=NADP-dependent oxidoreductase;protein_id=WP_233480444.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1719844 1720443 . + . ID=gene-LU604_RS09145;Name=LU604_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09145;old_locus_tag=LU604_09145 NZ_CP089942.1 Protein Homology CDS 1719844 1720443 . + 0 ID=cds-WP_016189799.1;Parent=gene-LU604_RS09145;Dbxref=Genbank:WP_016189799.1;Name=WP_016189799.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965725.1;locus_tag=LU604_RS09145;product=fimbrial protein;protein_id=WP_016189799.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1720500 1721240 . + . ID=gene-LU604_RS09150;Name=LU604_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09150;old_locus_tag=LU604_09150 NZ_CP089942.1 Protein Homology CDS 1720500 1721240 . + 0 ID=cds-WP_233480445.1;Parent=gene-LU604_RS09150;Dbxref=Genbank:WP_233480445.1;Name=WP_233480445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168794.1;locus_tag=LU604_RS09150;product=molecular chaperone;protein_id=WP_233480445.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1721263 1723785 . + . ID=gene-LU604_RS09155;Name=LU604_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09155;old_locus_tag=LU604_09155 NZ_CP089942.1 Protein Homology CDS 1721263 1723785 . + 0 ID=cds-WP_233480446.1;Parent=gene-LU604_RS09155;Dbxref=Genbank:WP_233480446.1;Name=WP_233480446.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012786.2;locus_tag=LU604_RS09155;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_233480446.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1723808 1724857 . + . ID=gene-LU604_RS09160;Name=LU604_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09160;old_locus_tag=LU604_09160 NZ_CP089942.1 Protein Homology CDS 1723808 1724857 . + 0 ID=cds-WP_233480447.1;Parent=gene-LU604_RS09160;Dbxref=Genbank:WP_233480447.1;Name=WP_233480447.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.2;locus_tag=LU604_RS09160;product=fimbrial protein;protein_id=WP_233480447.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1724848 1726149 . - . ID=gene-LU604_RS09165;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=LU604_RS09165;old_locus_tag=LU604_09165 NZ_CP089942.1 Protein Homology CDS 1724848 1726149 . - 0 ID=cds-WP_233480448.1;Parent=gene-LU604_RS09165;Dbxref=Genbank:WP_233480448.1;Name=WP_233480448.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189795.1;locus_tag=LU604_RS09165;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_233480448.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1726240 1727271 . + . ID=gene-LU604_RS09170;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=LU604_RS09170;old_locus_tag=LU604_09170 NZ_CP089942.1 Protein Homology CDS 1726240 1727271 . + 0 ID=cds-WP_233480449.1;Parent=gene-LU604_RS09170;Dbxref=Genbank:WP_233480449.1;Name=WP_233480449.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005745.1;locus_tag=LU604_RS09170;product=biotin synthase BioB;protein_id=WP_233480449.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1727272 1728426 . + . ID=gene-LU604_RS09175;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=LU604_RS09175;old_locus_tag=LU604_09175 NZ_CP089942.1 Protein Homology CDS 1727272 1728426 . + 0 ID=cds-WP_233480450.1;Parent=gene-LU604_RS09175;Dbxref=Genbank:WP_233480450.1;Name=WP_233480450.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189793.1;locus_tag=LU604_RS09175;product=8-amino-7-oxononanoate synthase;protein_id=WP_233480450.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1728410 1729168 . + . ID=gene-LU604_RS09180;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=LU604_RS09180;old_locus_tag=LU604_09180 NZ_CP089942.1 Protein Homology CDS 1728410 1729168 . + 0 ID=cds-WP_233480451.1;Parent=gene-LU604_RS09180;Dbxref=Genbank:WP_233480451.1;Name=WP_233480451.1;Ontology_term=GO:0009102,GO:0008171;gbkey=CDS;gene=bioC;go_function=O-methyltransferase activity|0008171||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156732.1;locus_tag=LU604_RS09180;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_233480451.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1729161 1729835 . + . ID=gene-LU604_RS09185;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=LU604_RS09185;old_locus_tag=LU604_09185 NZ_CP089942.1 Protein Homology CDS 1729161 1729835 . + 0 ID=cds-WP_233480452.1;Parent=gene-LU604_RS09185;Dbxref=Genbank:WP_233480452.1;Name=WP_233480452.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189791.1;locus_tag=LU604_RS09185;product=dethiobiotin synthase;protein_id=WP_233480452.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1730132 1730521 . + . ID=gene-LU604_RS09190;Name=LU604_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09190;old_locus_tag=LU604_09190 NZ_CP089942.1 GeneMarkS-2+ CDS 1730132 1730521 . + 0 ID=cds-WP_152664179.1;Parent=gene-LU604_RS09190;Dbxref=Genbank:WP_152664179.1;Name=WP_152664179.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09190;product=hypothetical protein;protein_id=WP_152664179.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1730927 1731646 . - . ID=gene-LU604_RS09195;Name=LU604_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09195;old_locus_tag=LU604_09195 NZ_CP089942.1 Protein Homology CDS 1730927 1731646 . - 0 ID=cds-WP_233480761.1;Parent=gene-LU604_RS09195;Dbxref=Genbank:WP_233480761.1;Name=WP_233480761.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851859.1;locus_tag=LU604_RS09195;product=ATP-binding cassette domain-containing protein;protein_id=WP_233480761.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1732524 1734548 . + . ID=gene-LU604_RS09200;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=LU604_RS09200;old_locus_tag=LU604_09200 NZ_CP089942.1 Protein Homology CDS 1732524 1734548 . + 0 ID=cds-WP_233480453.1;Parent=gene-LU604_RS09200;Dbxref=Genbank:WP_233480453.1;Name=WP_233480453.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=LU604_RS09200;product=excinuclease ABC subunit UvrB;protein_id=WP_233480453.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1735027 1735935 . - . ID=gene-LU604_RS09205;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=LU604_RS09205;old_locus_tag=LU604_09205 NZ_CP089942.1 Protein Homology CDS 1735027 1735935 . - 0 ID=cds-WP_016189788.1;Parent=gene-LU604_RS09205;Dbxref=Genbank:WP_016189788.1;Name=WP_016189788.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831146.1;locus_tag=LU604_RS09205;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_016189788.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1736016 1736168 . + . ID=gene-LU604_RS09210;Name=LU604_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09210;old_locus_tag=LU604_09210 NZ_CP089942.1 GeneMarkS-2+ CDS 1736016 1736168 . + 0 ID=cds-WP_157275207.1;Parent=gene-LU604_RS09210;Dbxref=Genbank:WP_157275207.1;Name=WP_157275207.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09210;product=hypothetical protein;protein_id=WP_157275207.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1736225 1737214 . + . ID=gene-LU604_RS09215;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=LU604_RS09215;old_locus_tag=LU604_09215 NZ_CP089942.1 Protein Homology CDS 1736225 1737214 . + 0 ID=cds-WP_233480762.1;Parent=gene-LU604_RS09215;Dbxref=Genbank:WP_233480762.1;Name=WP_233480762.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706659.2;locus_tag=LU604_RS09215;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_233480762.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1737232 1737747 . + . ID=gene-LU604_RS09220;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=LU604_RS09220;old_locus_tag=LU604_09220 NZ_CP089942.1 Protein Homology CDS 1737232 1737747 . + 0 ID=cds-WP_233480763.1;Parent=gene-LU604_RS09220;Dbxref=Genbank:WP_233480763.1;Name=WP_233480763.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189785.1;locus_tag=LU604_RS09220;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_233480763.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1737751 1738236 . + . ID=gene-LU604_RS09225;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=LU604_RS09225;old_locus_tag=LU604_09225 NZ_CP089942.1 Protein Homology CDS 1737751 1738236 . + 0 ID=cds-WP_016189784.1;Parent=gene-LU604_RS09225;Dbxref=Genbank:WP_016189784.1;Name=WP_016189784.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=LU604_RS09225;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_016189784.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1738229 1738474 . + . ID=gene-LU604_RS09230;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=LU604_RS09230;old_locus_tag=LU604_09230 NZ_CP089942.1 Protein Homology CDS 1738229 1738474 . + 0 ID=cds-WP_016189783.1;Parent=gene-LU604_RS09230;Dbxref=Genbank:WP_016189783.1;Name=WP_016189783.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441971.1;locus_tag=LU604_RS09230;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_016189783.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1738515 1738928 . + . ID=gene-LU604_RS09235;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=LU604_RS09235;old_locus_tag=LU604_09235 NZ_CP089942.1 Protein Homology CDS 1738515 1738928 . + 0 ID=cds-WP_233480764.1;Parent=gene-LU604_RS09235;Dbxref=Genbank:WP_233480764.1;Name=WP_233480764.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543799.1;locus_tag=LU604_RS09235;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_233480764.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1739205 1740317 . + . ID=gene-LU604_RS09240;Name=LU604_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09240;old_locus_tag=LU604_09240 NZ_CP089942.1 Protein Homology CDS 1739205 1740317 . + 0 ID=cds-WP_016189781.1;Parent=gene-LU604_RS09240;Dbxref=Genbank:WP_016189781.1;Name=WP_016189781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201375.1;locus_tag=LU604_RS09240;product=DUF1615 domain-containing protein;protein_id=WP_016189781.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1740490 1741200 . + . ID=gene-LU604_RS09245;Name=LU604_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09245;old_locus_tag=LU604_09245 NZ_CP089942.1 Protein Homology CDS 1740490 1741200 . + 0 ID=cds-WP_016189780.1;Parent=gene-LU604_RS09245;Dbxref=Genbank:WP_016189780.1;Name=WP_016189780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015700713.1;locus_tag=LU604_RS09245;product=Bax inhibitor-1/YccA family protein;protein_id=WP_016189780.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1741926 1742309 . + . ID=gene-LU604_RS09250;Name=LU604_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09250;old_locus_tag=LU604_09250 NZ_CP089942.1 Protein Homology CDS 1741926 1742309 . + 0 ID=cds-WP_016189779.1;Parent=gene-LU604_RS09250;Dbxref=Genbank:WP_016189779.1;Name=WP_016189779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201381.1;locus_tag=LU604_RS09250;product=hypothetical protein;protein_id=WP_016189779.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1742617 1744023 . + . ID=gene-LU604_RS09255;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=LU604_RS09255;old_locus_tag=LU604_09255 NZ_CP089942.1 Protein Homology CDS 1742617 1744023 . + 0 ID=cds-WP_016189778.1;Parent=gene-LU604_RS09255;Dbxref=Genbank:WP_016189778.1;Name=WP_016189778.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201386.1;locus_tag=LU604_RS09255;product=ATP-dependent RNA helicase RhlE;protein_id=WP_016189778.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1744080 1745021 . + . ID=gene-LU604_RS09260;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=LU604_RS09260;old_locus_tag=LU604_09260 NZ_CP089942.1 Protein Homology CDS 1744080 1745021 . + 0 ID=cds-WP_016189777.1;Parent=gene-LU604_RS09260;Dbxref=Genbank:WP_016189777.1;Name=WP_016189777.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228612.1;locus_tag=LU604_RS09260;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_016189777.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1745220 1746401 . + . ID=gene-LU604_RS09265;Name=LU604_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09265;old_locus_tag=LU604_09265 NZ_CP089942.1 Protein Homology CDS 1745220 1746401 . + 0 ID=cds-WP_233480454.1;Parent=gene-LU604_RS09265;Dbxref=Genbank:WP_233480454.1;Name=WP_233480454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189776.1;locus_tag=LU604_RS09265;product=MFS transporter;protein_id=WP_233480454.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1746715 1746981 . - . ID=gene-LU604_RS09270;Name=LU604_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09270;old_locus_tag=LU604_09270 NZ_CP089942.1 GeneMarkS-2+ CDS 1746715 1746981 . - 0 ID=cds-WP_233481559.1;Parent=gene-LU604_RS09270;Dbxref=Genbank:WP_233481559.1;Name=WP_233481559.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09270;product=hypothetical protein;protein_id=WP_233481559.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1747093 1748667 . + . ID=gene-LU604_RS09275;Name=LU604_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09275;old_locus_tag=LU604_09275 NZ_CP089942.1 Protein Homology CDS 1747093 1748667 . + 0 ID=cds-WP_233480765.1;Parent=gene-LU604_RS09275;Dbxref=Genbank:WP_233480765.1;Name=WP_233480765.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010247011.1;locus_tag=LU604_RS09275;product=methyl-accepting chemotaxis protein;protein_id=WP_233480765.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1749098 1750129 . - . ID=gene-LU604_RS09280;Name=LU604_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09280;old_locus_tag=LU604_09280 NZ_CP089942.1 Protein Homology CDS 1749098 1750129 . - 0 ID=cds-WP_233480455.1;Parent=gene-LU604_RS09280;Dbxref=Genbank:WP_233480455.1;Name=WP_233480455.1;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004946619.1;locus_tag=LU604_RS09280;product=methionine synthase;protein_id=WP_233480455.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1750156 1751139 . - . ID=gene-LU604_RS09285;Name=LU604_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09285;old_locus_tag=LU604_09285 NZ_CP089942.1 Protein Homology CDS 1750156 1751139 . - 0 ID=cds-WP_233480456.1;Parent=gene-LU604_RS09285;Dbxref=Genbank:WP_233480456.1;Name=WP_233480456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189771.1;locus_tag=LU604_RS09285;product=DUF1852 domain-containing protein;protein_id=WP_233480456.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1752212 1753399 . - . ID=gene-LU604_RS09290;Name=LU604_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09290;old_locus_tag=LU604_09290 NZ_CP089942.1 Protein Homology CDS 1752212 1753399 . - 0 ID=cds-WP_233480766.1;Parent=gene-LU604_RS09290;Dbxref=Genbank:WP_233480766.1;Name=WP_233480766.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201393.1;locus_tag=LU604_RS09290;product=L%2CD-transpeptidase family protein;protein_id=WP_233480766.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1753578 1753982 . - . ID=gene-LU604_RS09295;Name=LU604_RS09295;end_range=1753982,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS09295;old_locus_tag=LU604_09295;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1753578 1753982 . - 0 ID=cds-LU604_RS09295;Parent=gene-LU604_RS09295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1753982,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025127.1;locus_tag=LU604_RS09295;partial=true;product=glycoside hydrolase family 15 protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1753989 1754461 . - . ID=gene-LU604_RS09300;Name=LU604_RS09300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS09300;old_locus_tag=LU604_09300;partial=true;pseudo=true;start_range=.,1753989 NZ_CP089942.1 Protein Homology CDS 1753989 1754461 . - 0 ID=cds-LU604_RS09300;Parent=gene-LU604_RS09300;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201396.1;locus_tag=LU604_RS09300;partial=true;product=DedA family protein;pseudo=true;start_range=.,1753989;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1754733 1755318 . + . ID=gene-LU604_RS09305;Name=LU604_RS09305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS09305;old_locus_tag=LU604_09305;pseudo=true NZ_CP089942.1 Protein Homology CDS 1754733 1755318 . + 0 ID=cds-LU604_RS09305;Parent=gene-LU604_RS09305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014728500.1;locus_tag=LU604_RS09305;product=Yip1 family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1755588 1756529 . + . ID=gene-LU604_RS09310;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=LU604_RS09310;old_locus_tag=LU604_09310 NZ_CP089942.1 Protein Homology CDS 1755588 1756529 . + 0 ID=cds-WP_233480457.1;Parent=gene-LU604_RS09310;Dbxref=Genbank:WP_233480457.1;Name=WP_233480457.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189766.1;locus_tag=LU604_RS09310;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_233480457.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1756623 1759061 . + . ID=gene-LU604_RS09315;Name=LU604_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09315;old_locus_tag=LU604_09315 NZ_CP089942.1 Protein Homology CDS 1756623 1759061 . + 0 ID=cds-WP_233480458.1;Parent=gene-LU604_RS09315;Dbxref=Genbank:WP_233480458.1;Name=WP_233480458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189765.1;locus_tag=LU604_RS09315;product=DUF3772 domain-containing protein;protein_id=WP_233480458.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1759101 1759331 . + . ID=gene-LU604_RS09320;Name=LU604_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09320;old_locus_tag=LU604_09320 NZ_CP089942.1 GeneMarkS-2+ CDS 1759101 1759331 . + 0 ID=cds-WP_233480459.1;Parent=gene-LU604_RS09320;Dbxref=Genbank:WP_233480459.1;Name=WP_233480459.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09320;product=hypothetical protein;protein_id=WP_233480459.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1759322 1759549 . - . ID=gene-LU604_RS09325;Name=LU604_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09325;old_locus_tag=LU604_09325 NZ_CP089942.1 Protein Homology CDS 1759322 1759549 . - 0 ID=cds-WP_016189764.1;Parent=gene-LU604_RS09325;Dbxref=Genbank:WP_016189764.1;Name=WP_016189764.1;Ontology_term=GO:0006725,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: protein motif:HMM:NF013522.2;locus_tag=LU604_RS09325;product=tautomerase family protein;protein_id=WP_016189764.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1759571 1760506 . - . ID=gene-LU604_RS09330;Name=LU604_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09330;old_locus_tag=LU604_09330 NZ_CP089942.1 Protein Homology CDS 1759571 1760506 . - 0 ID=cds-WP_233480767.1;Parent=gene-LU604_RS09330;Dbxref=Genbank:WP_233480767.1;Name=WP_233480767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012882833.1;locus_tag=LU604_RS09330;product=pseudouridine-5'-phosphate glycosidase;protein_id=WP_233480767.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1760525 1764379 . - . ID=gene-LU604_RS09335;Name=LU604_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09335;old_locus_tag=LU604_09335 NZ_CP089942.1 Protein Homology CDS 1760525 1764379 . - 0 ID=cds-WP_233480460.1;Parent=gene-LU604_RS09335;Dbxref=Genbank:WP_233480460.1;Name=WP_233480460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189762.1;locus_tag=LU604_RS09335;product=amino acid adenylation domain-containing protein;protein_id=WP_233480460.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1764529 1765014 . - . ID=gene-LU604_RS09340;Name=LU604_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09340;old_locus_tag=LU604_09340 NZ_CP089942.1 Protein Homology CDS 1764529 1765014 . - 0 ID=cds-WP_233480461.1;Parent=gene-LU604_RS09340;Dbxref=Genbank:WP_233480461.1;Name=WP_233480461.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845814.1;locus_tag=LU604_RS09340;product=MarR family transcriptional regulator;protein_id=WP_233480461.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1765136 1765801 . + . ID=gene-LU604_RS09345;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=LU604_RS09345;old_locus_tag=LU604_09345 NZ_CP089942.1 Protein Homology CDS 1765136 1765801 . + 0 ID=cds-WP_233480462.1;Parent=gene-LU604_RS09345;Dbxref=Genbank:WP_233480462.1;Name=WP_233480462.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189760.1;locus_tag=LU604_RS09345;product=uracil phosphoribosyltransferase;protein_id=WP_233480462.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1765794 1766654 . + . ID=gene-LU604_RS09350;Name=LU604_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09350;old_locus_tag=LU604_09350 NZ_CP089942.1 Protein Homology CDS 1765794 1766654 . + 0 ID=cds-WP_233480463.1;Parent=gene-LU604_RS09350;Dbxref=Genbank:WP_233480463.1;Name=WP_233480463.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189759.1;locus_tag=LU604_RS09350;product=EamA family transporter;protein_id=WP_233480463.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1766748 1766882 . + . ID=gene-LU604_RS26965;Name=LU604_RS26965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26965 NZ_CP089942.1 GeneMarkS-2+ CDS 1766748 1766882 . + 0 ID=cds-WP_256371759.1;Parent=gene-LU604_RS26965;Dbxref=Genbank:WP_256371759.1;Name=WP_256371759.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26965;product=hypothetical protein;protein_id=WP_256371759.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1767067 1767417 . - . ID=gene-LU604_RS09355;Name=LU604_RS09355;end_range=1767417,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS09355;old_locus_tag=LU604_09355;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1767067 1767417 . - 0 ID=cds-LU604_RS09355;Parent=gene-LU604_RS09355;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1767417,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441958.1;locus_tag=LU604_RS09355;partial=true;product=D-lactate dehydrogenase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1767426 1768590 . - . ID=gene-LU604_RS09360;Name=LU604_RS09360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS09360;old_locus_tag=LU604_09360;pseudo=true NZ_CP089942.1 Protein Homology CDS 1767426 1768590 . - 0 ID=cds-LU604_RS09360;Parent=gene-LU604_RS09360;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611680.1;locus_tag=LU604_RS09360;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1768664 1770075 . - . ID=gene-LU604_RS09365;Name=dld;gbkey=Gene;gene=dld;gene_biotype=pseudogene;locus_tag=LU604_RS09365;old_locus_tag=LU604_09365;partial=true;pseudo=true;start_range=.,1768664 NZ_CP089942.1 Protein Homology CDS 1768664 1770075 . - 0 ID=cds-LU604_RS09365;Parent=gene-LU604_RS09365;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006089,GO:0019516,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA,lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827313.1;locus_tag=LU604_RS09365;partial=true;product=D-lactate dehydrogenase;pseudo=true;start_range=.,1768664;transl_table=11 NZ_CP089942.1 RefSeq gene 1770260 1772557 . + . ID=gene-LU604_RS09370;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=LU604_RS09370;old_locus_tag=LU604_09370 NZ_CP089942.1 Protein Homology CDS 1770260 1772557 . + 0 ID=cds-WP_233481560.1;Parent=gene-LU604_RS09370;Dbxref=Genbank:WP_233481560.1;Name=WP_233481560.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441957.1;locus_tag=LU604_RS09370;product=beta-glucosidase BglX;protein_id=WP_233481560.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1773026 1773892 . + . ID=gene-LU604_RS09375;Name=LU604_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09375;old_locus_tag=LU604_09375 NZ_CP089942.1 Protein Homology CDS 1773026 1773892 . + 0 ID=cds-WP_233480465.1;Parent=gene-LU604_RS09375;Dbxref=Genbank:WP_233480465.1;Name=WP_233480465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441956.1;locus_tag=LU604_RS09375;product=oxygenase MpaB family protein;protein_id=WP_233480465.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1774018 1775913 . + . ID=gene-LU604_RS09380;Name=LU604_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09380;old_locus_tag=LU604_09380 NZ_CP089942.1 Protein Homology CDS 1774018 1775913 . + 0 ID=cds-WP_233480466.1;Parent=gene-LU604_RS09380;Dbxref=Genbank:WP_233480466.1;Name=WP_233480466.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713886.1;locus_tag=LU604_RS09380;product=methyl-accepting chemotaxis protein;protein_id=WP_233480466.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1776054 1776611 . + . ID=gene-LU604_RS09385;Name=idi;gbkey=Gene;gene=idi;gene_biotype=pseudogene;locus_tag=LU604_RS09385;old_locus_tag=LU604_09385;pseudo=true NZ_CP089942.1 Protein Homology CDS 1776054 1776611 . + 0 ID=cds-LU604_RS09385;Parent=gene-LU604_RS09385;Note=frameshifted;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441954.1;locus_tag=LU604_RS09385;product=isopentenyl-diphosphate Delta-isomerase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1776702 1777866 . + . ID=gene-LU604_RS09390;Name=LU604_RS09390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS09390;old_locus_tag=LU604_09390;pseudo=true NZ_CP089942.1 Protein Homology CDS 1776702 1777866 . + 0 ID=cds-LU604_RS09390;Parent=gene-LU604_RS09390;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611680.1;locus_tag=LU604_RS09390;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1778003 1778107 . - . ID=gene-LU604_RS09395;Name=LU604_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09395;old_locus_tag=LU604_09395 NZ_CP089942.1 Protein Homology CDS 1778003 1778107 . - 0 ID=cds-WP_016189752.1;Parent=gene-LU604_RS09395;Dbxref=Genbank:WP_016189752.1;Name=WP_016189752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001216962.1;locus_tag=LU604_RS09395;product=protein YohO;protein_id=WP_016189752.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1778189 1778722 . - . ID=gene-LU604_RS09400;Name=LU604_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09400;old_locus_tag=LU604_09400 NZ_CP089942.1 Protein Homology CDS 1778189 1778722 . - 0 ID=cds-WP_016189751.1;Parent=gene-LU604_RS09400;Dbxref=Genbank:WP_016189751.1;Name=WP_016189751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169270.1;locus_tag=LU604_RS09400;product=DUF3833 domain-containing protein;protein_id=WP_016189751.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1778722 1779957 . - . ID=gene-LU604_RS09405;Name=LU604_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09405;old_locus_tag=LU604_09405 NZ_CP089942.1 Protein Homology CDS 1778722 1779957 . - 0 ID=cds-WP_016189750.1;Parent=gene-LU604_RS09405;Dbxref=Genbank:WP_016189750.1;Name=WP_016189750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201415.1;locus_tag=LU604_RS09405;product=cyclopropane-fatty-acyl-phospholipid synthase family protein;protein_id=WP_016189750.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1779961 1780674 . - . ID=gene-LU604_RS09410;Name=LU604_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09410;old_locus_tag=LU604_09410 NZ_CP089942.1 Protein Homology CDS 1779961 1780674 . - 0 ID=cds-WP_016189749.1;Parent=gene-LU604_RS09410;Dbxref=Genbank:WP_016189749.1;Name=WP_016189749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441950.1;locus_tag=LU604_RS09410;product=DUF1365 domain-containing protein;protein_id=WP_016189749.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1780671 1781948 . - . ID=gene-LU604_RS09415;Name=LU604_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09415;old_locus_tag=LU604_09415 NZ_CP089942.1 Protein Homology CDS 1780671 1781948 . - 0 ID=cds-WP_233480768.1;Parent=gene-LU604_RS09415;Dbxref=Genbank:WP_233480768.1;Name=WP_233480768.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172346.1;locus_tag=LU604_RS09415;product=FAD-dependent oxidoreductase;protein_id=WP_233480768.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1781951 1782667 . - . ID=gene-LU604_RS09420;Name=LU604_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09420;old_locus_tag=LU604_09420 NZ_CP089942.1 Protein Homology CDS 1781951 1782667 . - 0 ID=cds-WP_233480467.1;Parent=gene-LU604_RS09420;Dbxref=Genbank:WP_233480467.1;Name=WP_233480467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668643.1;locus_tag=LU604_RS09420;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_233480467.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1782664 1783095 . - . ID=gene-LU604_RS09425;Name=LU604_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09425;old_locus_tag=LU604_09425 NZ_CP089942.1 Protein Homology CDS 1782664 1783095 . - 0 ID=cds-WP_233480468.1;Parent=gene-LU604_RS09425;Dbxref=Genbank:WP_233480468.1;Name=WP_233480468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668642.1;locus_tag=LU604_RS09425;product=nuclear transport factor 2 family protein;protein_id=WP_233480468.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1783104 1783838 . - . ID=gene-LU604_RS09430;Name=LU604_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09430;old_locus_tag=LU604_09430 NZ_CP089942.1 Protein Homology CDS 1783104 1783838 . - 0 ID=cds-WP_233480469.1;Parent=gene-LU604_RS09430;Dbxref=Genbank:WP_233480469.1;Name=WP_233480469.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189745.1;locus_tag=LU604_RS09430;product=MerR family transcriptional regulator;protein_id=WP_233480469.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1784017 1784535 . + . ID=gene-LU604_RS09435;Name=LU604_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09435;old_locus_tag=LU604_09435 NZ_CP089942.1 Protein Homology CDS 1784017 1784535 . + 0 ID=cds-WP_016189744.1;Parent=gene-LU604_RS09435;Dbxref=Genbank:WP_016189744.1;Name=WP_016189744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543820.1;locus_tag=LU604_RS09435;product=GNAT family N-acetyltransferase;protein_id=WP_016189744.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1784776 1785351 . + . ID=gene-LU604_RS09440;Name=LU604_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09440;old_locus_tag=LU604_09440 NZ_CP089942.1 Protein Homology CDS 1784776 1785351 . + 0 ID=cds-WP_016189743.1;Parent=gene-LU604_RS09440;Dbxref=Genbank:WP_016189743.1;Name=WP_016189743.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: protein motif:HMM:NF018068.2;locus_tag=LU604_RS09440;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_016189743.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1785844 1788010 . + . ID=gene-LU604_RS09445;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=pseudogene;locus_tag=LU604_RS09445;old_locus_tag=LU604_09445;pseudo=true NZ_CP089942.1 Protein Homology CDS 1785844 1788010 . + 0 ID=cds-LU604_RS09445;Parent=gene-LU604_RS09445;Note=frameshifted;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156788.1;locus_tag=LU604_RS09445;product=ATP-dependent DNA helicase DinG;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1788043 1789014 . + . ID=gene-LU604_RS09450;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=pseudogene;locus_tag=LU604_RS09450;old_locus_tag=LU604_09450;pseudo=true NZ_CP089942.1 Protein Homology CDS 1788043 1789014 . + 0 ID=cds-LU604_RS09450;Parent=gene-LU604_RS09450;Note=internal stop;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543822.1;locus_tag=LU604_RS09450;product=DNA-binding protein YbiB;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1789139 1789636 . - . ID=gene-LU604_RS09455;Name=LU604_RS09455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS09455;old_locus_tag=LU604_09455;pseudo=true NZ_CP089942.1 Protein Homology CDS 1789139 1789636 . - 0 ID=cds-LU604_RS09455;Parent=gene-LU604_RS09455;Note=frameshifted%3B internal stop;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009636153.1;locus_tag=LU604_RS09455;product=flavin reductase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1789722 1790882 . - . ID=gene-LU604_RS09460;Name=LU604_RS09460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS09460;old_locus_tag=LU604_09460;pseudo=true NZ_CP089942.1 Protein Homology CDS 1789722 1790882 . - 0 ID=cds-LU604_RS09460;Parent=gene-LU604_RS09460;Note=frameshifted%3B internal stop;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156790.1;locus_tag=LU604_RS09460;product=amidohydrolase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1791048 1791227 . - . ID=gene-LU604_RS09465;Name=LU604_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09465;old_locus_tag=LU604_09465 NZ_CP089942.1 GeneMarkS-2+ CDS 1791048 1791227 . - 0 ID=cds-WP_152664177.1;Parent=gene-LU604_RS09465;Dbxref=Genbank:WP_152664177.1;Name=WP_152664177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09465;product=hypothetical protein;protein_id=WP_152664177.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1791941 1792462 . - . ID=gene-LU604_RS09470;Name=LU604_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09470;old_locus_tag=LU604_09470 NZ_CP089942.1 Protein Homology CDS 1791941 1792462 . - 0 ID=cds-WP_233480769.1;Parent=gene-LU604_RS09470;Dbxref=Genbank:WP_233480769.1;Name=WP_233480769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156800.1;locus_tag=LU604_RS09470;product=5'-3'-deoxyribonucleotidase;protein_id=WP_233480769.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1792555 1793184 . - . ID=gene-LU604_RS09475;Name=LU604_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09475;old_locus_tag=LU604_09475 NZ_CP089942.1 Protein Homology CDS 1792555 1793184 . - 0 ID=cds-WP_233480471.1;Parent=gene-LU604_RS09475;Dbxref=Genbank:WP_233480471.1;Name=WP_233480471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189736.1;locus_tag=LU604_RS09475;product=flavin reductase family protein;protein_id=WP_233480471.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1793306 1794238 . + . ID=gene-LU604_RS09480;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=LU604_RS09480;old_locus_tag=LU604_09480 NZ_CP089942.1 Protein Homology CDS 1793306 1794238 . + 0 ID=cds-WP_233480472.1;Parent=gene-LU604_RS09480;Dbxref=Genbank:WP_233480472.1;Name=WP_233480472.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668622.1;locus_tag=LU604_RS09480;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_233480472.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1794227 1795874 . - . ID=gene-LU604_RS09485;Name=ybiO;end_range=1795874,.;gbkey=Gene;gene=ybiO;gene_biotype=pseudogene;locus_tag=LU604_RS09485;old_locus_tag=LU604_09485;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1794227 1795874 . - 0 ID=cds-LU604_RS09485;Parent=gene-LU604_RS09485;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085;end_range=1795874,.;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799163.1;locus_tag=LU604_RS09485;partial=true;product=mechanosensitive channel protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1796206 1796928 . - . ID=gene-LU604_RS09490;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=LU604_RS09490;old_locus_tag=LU604_09490 NZ_CP089942.1 Protein Homology CDS 1796206 1796928 . - 0 ID=cds-WP_233480473.1;Parent=gene-LU604_RS09490;Dbxref=Genbank:WP_233480473.1;Name=WP_233480473.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=LU604_RS09490;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_233480473.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1796925 1797584 . - . ID=gene-LU604_RS09495;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=LU604_RS09495;old_locus_tag=LU604_09495 NZ_CP089942.1 Protein Homology CDS 1796925 1797584 . - 0 ID=cds-WP_016189731.1;Parent=gene-LU604_RS09495;Dbxref=Genbank:WP_016189731.1;Name=WP_016189731.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=LU604_RS09495;product=glutamine ABC transporter permease GlnP;protein_id=WP_016189731.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1797663 1798409 . - . ID=gene-LU604_RS09500;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=LU604_RS09500;old_locus_tag=LU604_09500 NZ_CP089942.1 Protein Homology CDS 1797663 1798409 . - 0 ID=cds-WP_016189730.1;Parent=gene-LU604_RS09500;Dbxref=Genbank:WP_016189730.1;Name=WP_016189730.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=glnH;go_component=membrane|0016020||IEA;go_function=ligand-gated ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459807.1;locus_tag=LU604_RS09500;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_016189730.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1798761 1799264 . - . ID=gene-LU604_RS09505;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=LU604_RS09505;old_locus_tag=LU604_09505 NZ_CP089942.1 Protein Homology CDS 1798761 1799264 . - 0 ID=cds-WP_016189729.1;Parent=gene-LU604_RS09505;Dbxref=Genbank:WP_016189729.1;Name=WP_016189729.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225973.1;locus_tag=LU604_RS09505;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_016189729.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1799609 1800502 . - . ID=gene-LU604_RS09510;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=LU604_RS09510;old_locus_tag=LU604_09510 NZ_CP089942.1 Protein Homology CDS 1799609 1800502 . - 0 ID=cds-WP_016189728.1;Parent=gene-LU604_RS09510;Dbxref=Genbank:WP_016189728.1;Name=WP_016189728.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201459.1;locus_tag=LU604_RS09510;product=threonine/homoserine exporter RhtA;protein_id=WP_016189728.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1800855 1801367 . + . ID=gene-LU604_RS09515;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=LU604_RS09515;old_locus_tag=LU604_09515 NZ_CP089942.1 Protein Homology CDS 1800855 1801367 . + 0 ID=cds-WP_016189727.1;Parent=gene-LU604_RS09515;Dbxref=Genbank:WP_016189727.1;Name=WP_016189727.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357252.1;locus_tag=LU604_RS09515;product=outer membrane protein OmpX;protein_id=WP_016189727.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1801702 1802154 . + . ID=gene-LU604_RS09520;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=LU604_RS09520;old_locus_tag=LU604_09520 NZ_CP089942.1 Protein Homology CDS 1801702 1802154 . + 0 ID=cds-WP_016189726.1;Parent=gene-LU604_RS09520;Dbxref=Genbank:WP_016189726.1;Name=WP_016189726.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189726.1;locus_tag=LU604_RS09520;product=manganese-binding transcriptional regulator MntR;protein_id=WP_016189726.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1802179 1803294 . + . ID=gene-LU604_RS09525;Name=LU604_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09525;old_locus_tag=LU604_09525 NZ_CP089942.1 Protein Homology CDS 1802179 1803294 . + 0 ID=cds-WP_040465283.1;Parent=gene-LU604_RS09525;Dbxref=Genbank:WP_040465283.1;Name=WP_040465283.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593277.1;locus_tag=LU604_RS09525;product=SLC13 family permease;protein_id=WP_040465283.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1803411 1804520 . + . ID=gene-LU604_RS09530;Name=LU604_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09530;old_locus_tag=LU604_09530 NZ_CP089942.1 Protein Homology CDS 1803411 1804520 . + 0 ID=cds-WP_233480474.1;Parent=gene-LU604_RS09530;Dbxref=Genbank:WP_233480474.1;Name=WP_233480474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189724.1;locus_tag=LU604_RS09530;product=HlyD family secretion protein;protein_id=WP_233480474.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1804517 1806085 . + . ID=gene-LU604_RS09535;Name=LU604_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09535;old_locus_tag=LU604_09535 NZ_CP089942.1 Protein Homology CDS 1804517 1806085 . + 0 ID=cds-WP_233480475.1;Parent=gene-LU604_RS09535;Dbxref=Genbank:WP_233480475.1;Name=WP_233480475.1;Ontology_term=GO:0006855,GO:0009410,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441915.1;locus_tag=LU604_RS09535;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_233480475.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1806087 1807643 . + . ID=gene-LU604_RS09540;Name=LU604_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09540;old_locus_tag=LU604_09540 NZ_CP089942.1 Protein Homology CDS 1806087 1807643 . + 0 ID=cds-WP_233480476.1;Parent=gene-LU604_RS09540;Dbxref=Genbank:WP_233480476.1;Name=WP_233480476.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189722.1;locus_tag=LU604_RS09540;product=efflux transporter outer membrane subunit;protein_id=WP_233480476.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1807582 1807881 . - . ID=gene-LU604_RS09545;Name=LU604_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09545;old_locus_tag=LU604_09545 NZ_CP089942.1 Protein Homology CDS 1807582 1807881 . - 0 ID=cds-WP_233480770.1;Parent=gene-LU604_RS09545;Dbxref=Genbank:WP_233480770.1;Name=WP_233480770.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022362.2;locus_tag=LU604_RS09545;product=DUF2778 domain-containing protein;protein_id=WP_233480770.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1807864 1808190 . + . ID=gene-LU604_RS09550;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS09550;old_locus_tag=LU604_09550;partial=true;pseudo=true;start_range=.,1807864 NZ_CP089942.1 Protein Homology CDS 1807864 1808190 . + 0 ID=cds-LU604_RS09550;Parent=gene-LU604_RS09550;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=LU604_RS09550;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,1807864;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1808327 1808491 . + . ID=gene-LU604_RS09555;Name=LU604_RS09555;end_range=1808491,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS09555;old_locus_tag=LU604_09555;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1808327 1808491 . + 0 ID=cds-LU604_RS09555;Parent=gene-LU604_RS09555;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1808491,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU604_RS09555;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1808677 1809102 . + . ID=gene-LU604_RS09560;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS09560;old_locus_tag=LU604_09560 NZ_CP089942.1 Protein Homology CDS 1808677 1809102 . + 0 ID=cds-WP_233480477.1;Parent=gene-LU604_RS09560;Dbxref=Genbank:WP_233480477.1;Name=WP_233480477.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190995.1;locus_tag=LU604_RS09560;product=IS200/IS605 family transposase;protein_id=WP_233480477.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1809506 1809697 . - . ID=gene-LU604_RS09565;Name=LU604_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09565;old_locus_tag=LU604_09565 NZ_CP089942.1 GeneMarkS-2+ CDS 1809506 1809697 . - 0 ID=cds-WP_233480478.1;Parent=gene-LU604_RS09565;Dbxref=Genbank:WP_233480478.1;Name=WP_233480478.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09565;product=hypothetical protein;protein_id=WP_233480478.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1809861 1811453 . + . ID=gene-LU604_RS09570;Name=LU604_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09570;old_locus_tag=LU604_09570 NZ_CP089942.1 Protein Homology CDS 1809861 1811453 . + 0 ID=cds-WP_233480479.1;Parent=gene-LU604_RS09570;Dbxref=Genbank:WP_233480479.1;Name=WP_233480479.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156829.1;locus_tag=LU604_RS09570;product=ABC-F family ATPase;protein_id=WP_233480479.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1811984 1812751 . - . ID=gene-LU604_RS09575;Name=LU604_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09575;old_locus_tag=LU604_09575 NZ_CP089942.1 Protein Homology CDS 1811984 1812751 . - 0 ID=cds-WP_233480771.1;Parent=gene-LU604_RS09575;Dbxref=Genbank:WP_233480771.1;Name=WP_233480771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189717.1;locus_tag=LU604_RS09575;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_233480771.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1812753 1813991 . - . ID=gene-LU604_RS09580;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=LU604_RS09580;old_locus_tag=LU604_09580 NZ_CP089942.1 Protein Homology CDS 1812753 1813991 . - 0 ID=cds-WP_233480481.1;Parent=gene-LU604_RS09580;Dbxref=Genbank:WP_233480481.1;Name=WP_233480481.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189716.1;locus_tag=LU604_RS09580;product=molybdopterin molybdotransferase MoeA;protein_id=WP_233480481.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1814013 1814159 . - . ID=gene-LU604_RS09585;Name=LU604_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09585;old_locus_tag=LU604_09585 NZ_CP089942.1 GeneMarkS-2+ CDS 1814013 1814159 . - 0 ID=cds-WP_233480482.1;Parent=gene-LU604_RS09585;Dbxref=Genbank:WP_233480482.1;Name=WP_233480482.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09585;product=hypothetical protein;protein_id=WP_233480482.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1814329 1815297 . + . ID=gene-LU604_RS09590;Name=LU604_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09590;old_locus_tag=LU604_09590 NZ_CP089942.1 Protein Homology CDS 1814329 1815297 . + 0 ID=cds-WP_233480483.1;Parent=gene-LU604_RS09590;Dbxref=Genbank:WP_233480483.1;Name=WP_233480483.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189715.1;locus_tag=LU604_RS09590;product=isoaspartyl peptidase/L-asparaginase;protein_id=WP_233480483.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1815294 1817156 . + . ID=gene-LU604_RS09595;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=LU604_RS09595;old_locus_tag=LU604_09595 NZ_CP089942.1 Protein Homology CDS 1815294 1817156 . + 0 ID=cds-WP_233480484.1;Parent=gene-LU604_RS09595;Dbxref=Genbank:WP_233480484.1;Name=WP_233480484.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189714.1;locus_tag=LU604_RS09595;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_233480484.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1817199 1818731 . + . ID=gene-LU604_RS09600;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=LU604_RS09600;old_locus_tag=LU604_09600 NZ_CP089942.1 Protein Homology CDS 1817199 1818731 . + 0 ID=cds-WP_016189713.1;Parent=gene-LU604_RS09600;Dbxref=Genbank:WP_016189713.1;Name=WP_016189713.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802405.1;locus_tag=LU604_RS09600;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_016189713.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1818794 1819714 . + . ID=gene-LU604_RS09605;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=LU604_RS09605;old_locus_tag=LU604_09605 NZ_CP089942.1 Protein Homology CDS 1818794 1819714 . + 0 ID=cds-WP_233480485.1;Parent=gene-LU604_RS09605;Dbxref=Genbank:WP_233480485.1;Name=WP_233480485.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225998.1;locus_tag=LU604_RS09605;product=glutathione ABC transporter permease GsiC;protein_id=WP_233480485.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1819724 1820629 . + . ID=gene-LU604_RS09610;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=LU604_RS09610;old_locus_tag=LU604_09610 NZ_CP089942.1 Protein Homology CDS 1819724 1820629 . + 0 ID=cds-WP_016189711.1;Parent=gene-LU604_RS09610;Dbxref=Genbank:WP_016189711.1;Name=WP_016189711.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013508456.1;locus_tag=LU604_RS09610;product=glutathione ABC transporter permease GsiD;protein_id=WP_016189711.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1820634 1821079 . + . ID=gene-LU604_RS09615;Name=LU604_RS09615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS09615;old_locus_tag=LU604_09615;pseudo=true NZ_CP089942.1 Protein Homology CDS 1820634 1821079 . + 0 ID=cds-LU604_RS09615;Parent=gene-LU604_RS09615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172647.1;locus_tag=LU604_RS09615;product=DUF4385 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1821248 1822576 . - . ID=gene-LU604_RS09620;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=LU604_RS09620;old_locus_tag=LU604_09620 NZ_CP089942.1 Protein Homology CDS 1821248 1822576 . - 0 ID=cds-WP_016189708.1;Parent=gene-LU604_RS09620;Dbxref=Genbank:WP_016189708.1;Name=WP_016189708.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201476.1;locus_tag=LU604_RS09620;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_016189708.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1822908 1823144 . - . ID=gene-LU604_RS09625;Name=LU604_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09625;old_locus_tag=LU604_09625 NZ_CP089942.1 GeneMarkS-2+ CDS 1822908 1823144 . - 0 ID=cds-WP_233480486.1;Parent=gene-LU604_RS09625;Dbxref=Genbank:WP_233480486.1;Name=WP_233480486.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09625;product=hypothetical protein;protein_id=WP_233480486.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1823269 1824423 . - . ID=gene-LU604_RS09630;Name=LU604_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09630;old_locus_tag=LU604_09630 NZ_CP089942.1 Protein Homology CDS 1823269 1824423 . - 0 ID=cds-WP_233481561.1;Parent=gene-LU604_RS09630;Dbxref=Genbank:WP_233481561.1;Name=WP_233481561.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU604_RS09630;product=IS91 family transposase;protein_id=WP_233481561.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1824608 1825480 . + . ID=gene-LU604_RS09635;Name=LU604_RS09635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS09635;old_locus_tag=LU604_09635;partial=true;pseudo=true;start_range=.,1824608 NZ_CP089942.1 Protein Homology CDS 1824608 1825480 . + 0 ID=cds-LU604_RS09635;Parent=gene-LU604_RS09635;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668599.1;locus_tag=LU604_RS09635;partial=true;product=serine-type D-Ala-D-Ala carboxypeptidase;pseudo=true;start_range=.,1824608;transl_table=11 NZ_CP089942.1 RefSeq gene 1825666 1826265 . - . ID=gene-LU604_RS09640;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=LU604_RS09640;old_locus_tag=LU604_09640 NZ_CP089942.1 Protein Homology CDS 1825666 1826265 . - 0 ID=cds-WP_233480772.1;Parent=gene-LU604_RS09640;Dbxref=Genbank:WP_233480772.1;Name=WP_233480772.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189706.1;locus_tag=LU604_RS09640;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_233480772.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1826738 1827938 . + . ID=gene-LU604_RS09645;Name=LU604_RS09645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS09645;old_locus_tag=LU604_09645;pseudo=true NZ_CP089942.1 Protein Homology CDS 1826738 1827938 . + 0 ID=cds-LU604_RS09645;Parent=gene-LU604_RS09645;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU604_RS09645;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1827959 1829608 . - . ID=gene-LU604_RS09650;Name=LU604_RS09650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS09650;old_locus_tag=LU604_09650;pseudo=true NZ_CP089942.1 Protein Homology CDS 1827959 1829608 . - 0 ID=cds-LU604_RS09650;Parent=gene-LU604_RS09650;Note=frameshifted%3B internal stop;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=LU604_RS09650;product=aspartate:alanine antiporter;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1829958 1830344 . + . ID=gene-LU604_RS09655;Name=ybjM;gbkey=Gene;gene=ybjM;gene_biotype=protein_coding;locus_tag=LU604_RS09655;old_locus_tag=LU604_09655 NZ_CP089942.1 Protein Homology CDS 1829958 1830344 . + 0 ID=cds-WP_233481562.1;Parent=gene-LU604_RS09655;Dbxref=Genbank:WP_233481562.1;Name=WP_233481562.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybjM;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189701.1;locus_tag=LU604_RS09655;product=inner membrane protein YbjM;protein_id=WP_233481562.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1830608 1830871 . - . ID=gene-LU604_RS09660;Name=LU604_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09660;old_locus_tag=LU604_09660 NZ_CP089942.1 Protein Homology CDS 1830608 1830871 . - 0 ID=cds-WP_233480490.1;Parent=gene-LU604_RS09660;Dbxref=Genbank:WP_233480490.1;Name=WP_233480490.1;Ontology_term=GO:0097573;gbkey=CDS;go_function=glutathione oxidoreductase activity|0097573||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668594.1;locus_tag=LU604_RS09660;product=GrxA family glutaredoxin;protein_id=WP_233480490.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1831355 1832077 . + . ID=gene-LU604_RS09665;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=LU604_RS09665;old_locus_tag=LU604_09665 NZ_CP089942.1 Protein Homology CDS 1831355 1832077 . + 0 ID=cds-WP_233480773.1;Parent=gene-LU604_RS09665;Dbxref=Genbank:WP_233480773.1;Name=WP_233480773.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012068493.1;locus_tag=LU604_RS09665;product=oxygen-insensitive NADPH nitroreductase;protein_id=WP_233480773.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1832295 1832774 . + . ID=gene-LU604_RS09670;Name=LU604_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09670;old_locus_tag=LU604_09670 NZ_CP089942.1 Protein Homology CDS 1832295 1832774 . + 0 ID=cds-WP_233480491.1;Parent=gene-LU604_RS09670;Dbxref=Genbank:WP_233480491.1;Name=WP_233480491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189698.1;locus_tag=LU604_RS09670;product=YbjN domain-containing protein;protein_id=WP_233480491.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1833062 1833532 . - . ID=gene-LU604_RS09675;Name=LU604_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09675;old_locus_tag=LU604_09675 NZ_CP089942.1 GeneMarkS-2+ CDS 1833062 1833532 . - 0 ID=cds-WP_233480492.1;Parent=gene-LU604_RS09675;Dbxref=Genbank:WP_233480492.1;Name=WP_233480492.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09675;product=HlyD family secretion protein;protein_id=WP_233480492.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1833892 1834152 . - . ID=gene-LU604_RS09680;Name=LU604_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09680;old_locus_tag=LU604_09680 NZ_CP089942.1 GeneMarkS-2+ CDS 1833892 1834152 . - 0 ID=cds-WP_233480493.1;Parent=gene-LU604_RS09680;Dbxref=Genbank:WP_233480493.1;Name=WP_233480493.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09680;product=hypothetical protein;protein_id=WP_233480493.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1834474 1834825 . + . ID=gene-LU604_RS09685;Name=LU604_RS09685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS09685;old_locus_tag=LU604_09685;partial=true;pseudo=true;start_range=.,1834474 NZ_CP089942.1 Protein Homology CDS 1834474 1834825 . + 0 ID=cds-LU604_RS09685;Parent=gene-LU604_RS09685;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611902.1;locus_tag=LU604_RS09685;partial=true;product=ISNCY family transposase;pseudo=true;start_range=.,1834474;transl_table=11 NZ_CP089942.1 RefSeq gene 1835767 1836463 . - . ID=gene-LU604_RS09690;Name=LU604_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09690;old_locus_tag=LU604_09690 NZ_CP089942.1 Protein Homology CDS 1836210 1836463 . - 0 ID=cds-WP_233481563.1;Parent=gene-LU604_RS09690;Dbxref=Genbank:WP_233481563.1;Name=WP_233481563.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU604_RS09690;product=IS1 family transposase;protein_id=WP_233481563.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 1835767 1836211 . - 1 ID=cds-WP_233481563.1;Parent=gene-LU604_RS09690;Dbxref=Genbank:WP_233481563.1;Name=WP_233481563.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU604_RS09690;product=IS1 family transposase;protein_id=WP_233481563.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1836607 1837734 . + . ID=gene-LU604_RS09695;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=LU604_RS09695;old_locus_tag=LU604_09695 NZ_CP089942.1 Protein Homology CDS 1836607 1837734 . + 0 ID=cds-WP_233480495.1;Parent=gene-LU604_RS09695;Dbxref=Genbank:WP_233480495.1;Name=WP_233480495.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849288.1;locus_tag=LU604_RS09695;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_233480495.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1837799 1838020 . - . ID=gene-LU604_RS26970;Name=LU604_RS26970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS26970;partial=true;pseudo=true;start_range=.,1837799 NZ_CP089942.1 Protein Homology CDS 1837799 1838020 . - 0 ID=cds-LU604_RS26970;Parent=gene-LU604_RS26970;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.2;locus_tag=LU604_RS26970;partial=true;product=transporter substrate-binding domain-containing protein;pseudo=true;start_range=.,1837799;transl_table=11 NZ_CP089942.1 RefSeq gene 1837918 1838388 . - . ID=gene-LU604_RS26975;Name=LU604_RS26975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26975 NZ_CP089942.1 Protein Homology CDS 1837918 1838388 . - 0 ID=cds-WP_252120241.1;Parent=gene-LU604_RS26975;Dbxref=Genbank:WP_252120241.1;Name=WP_252120241.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.2;locus_tag=LU604_RS26975;product=transporter substrate-binding domain-containing protein;protein_id=WP_252120241.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1838573 1839241 . - . ID=gene-LU604_RS09705;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=LU604_RS09705;old_locus_tag=LU604_09705 NZ_CP089942.1 Protein Homology CDS 1838573 1839241 . - 0 ID=cds-WP_016189692.1;Parent=gene-LU604_RS09705;Dbxref=Genbank:WP_016189692.1;Name=WP_016189692.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014729230.1;locus_tag=LU604_RS09705;product=arginine ABC transporter permease ArtM;protein_id=WP_016189692.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1839235 1839957 . - . ID=gene-LU604_RS09710;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=LU604_RS09710;old_locus_tag=LU604_09710 NZ_CP089942.1 Protein Homology CDS 1839235 1839957 . - 0 ID=cds-WP_233480496.1;Parent=gene-LU604_RS09710;Dbxref=Genbank:WP_233480496.1;Name=WP_233480496.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189691.1;locus_tag=LU604_RS09710;product=arginine ABC transporter permease ArtQ;protein_id=WP_233480496.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1839965 1840696 . - . ID=gene-LU604_RS09715;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=LU604_RS09715;old_locus_tag=LU604_09715 NZ_CP089942.1 Protein Homology CDS 1839965 1840696 . - 0 ID=cds-WP_233480774.1;Parent=gene-LU604_RS09715;Dbxref=Genbank:WP_233480774.1;Name=WP_233480774.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295339.1;locus_tag=LU604_RS09715;product=arginine ABC transporter substrate-binding protein;protein_id=WP_233480774.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1840711 1841439 . - . ID=gene-LU604_RS09720;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=LU604_RS09720;old_locus_tag=LU604_09720 NZ_CP089942.1 Protein Homology CDS 1840711 1841439 . - 0 ID=cds-WP_233480497.1;Parent=gene-LU604_RS09720;Dbxref=Genbank:WP_233480497.1;Name=WP_233480497.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=artP;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308974.1;locus_tag=LU604_RS09720;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_233480497.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1841640 1842179 . - . ID=gene-LU604_RS09725;Name=LU604_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09725;old_locus_tag=LU604_09725 NZ_CP089942.1 Protein Homology CDS 1841640 1842179 . - 0 ID=cds-WP_233480498.1;Parent=gene-LU604_RS09725;Dbxref=Genbank:WP_233480498.1;Name=WP_233480498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156874.1;locus_tag=LU604_RS09725;product=lipoprotein;protein_id=WP_233480498.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1843252 1843479 . - . ID=gene-LU604_RS09730;Name=LU604_RS09730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS09730;old_locus_tag=LU604_09730;partial=true;pseudo=true;start_range=.,1843252 NZ_CP089942.1 Protein Homology CDS 1843252 1843479 . - 0 ID=cds-LU604_RS09730;Parent=gene-LU604_RS09730;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003230776.1;locus_tag=LU604_RS09730;partial=true;product=cold shock domain-containing protein;pseudo=true;start_range=.,1843252;transl_table=11 NZ_CP089942.1 RefSeq gene 1843802 1844122 . + . ID=gene-LU604_RS09735;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=LU604_RS09735;old_locus_tag=LU604_09735 NZ_CP089942.1 Protein Homology CDS 1843802 1844122 . + 0 ID=cds-WP_016189684.1;Parent=gene-LU604_RS09735;Dbxref=Genbank:WP_016189684.1;Name=WP_016189684.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=LU604_RS09735;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_016189684.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1844151 1846427 . + . ID=gene-LU604_RS09740;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=LU604_RS09740;old_locus_tag=LU604_09740 NZ_CP089942.1 Protein Homology CDS 1844151 1846427 . + 0 ID=cds-WP_233480499.1;Parent=gene-LU604_RS09740;Dbxref=Genbank:WP_233480499.1;Name=WP_233480499.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156887.1;locus_tag=LU604_RS09740;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_233480499.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1846512 1846730 . - . ID=gene-LU604_RS09745;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=LU604_RS09745;old_locus_tag=LU604_09745 NZ_CP089942.1 Protein Homology CDS 1846512 1846730 . - 0 ID=cds-WP_002211347.1;Parent=gene-LU604_RS09745;Dbxref=Genbank:WP_002211347.1;Name=WP_002211347.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=LU604_RS09745;product=translation initiation factor IF-1;protein_id=WP_002211347.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1847078 1847770 . - . ID=gene-LU604_RS09750;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=LU604_RS09750;old_locus_tag=LU604_09750 NZ_CP089942.1 Protein Homology CDS 1847078 1847770 . - 0 ID=cds-WP_233480500.1;Parent=gene-LU604_RS09750;Dbxref=Genbank:WP_233480500.1;Name=WP_233480500.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668571.1;locus_tag=LU604_RS09750;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_233480500.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1847803 1849530 . - . ID=gene-LU604_RS09755;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=LU604_RS09755;old_locus_tag=LU604_09755 NZ_CP089942.1 Protein Homology CDS 1847803 1849530 . - 0 ID=cds-WP_233480501.1;Parent=gene-LU604_RS09755;Dbxref=Genbank:WP_233480501.1;Name=WP_233480501.1;Ontology_term=GO:0034775,GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=glutathione transmembrane transport|0034775||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543874.1;locus_tag=LU604_RS09755;product=cysteine/glutathione ABC transporter ATP-binding protein/permease CydC;protein_id=WP_233480501.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1849534 1851294 . - . ID=gene-LU604_RS09760;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=LU604_RS09760;old_locus_tag=LU604_09760 NZ_CP089942.1 Protein Homology CDS 1849534 1851294 . - 0 ID=cds-WP_233480502.1;Parent=gene-LU604_RS09760;Dbxref=Genbank:WP_233480502.1;Name=WP_233480502.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156890.1;locus_tag=LU604_RS09760;product=cysteine/glutathione ABC transporter permease/ATP-binding protein CydD;protein_id=WP_233480502.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1851436 1852404 . - . ID=gene-LU604_RS09765;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=LU604_RS09765;old_locus_tag=LU604_09765 NZ_CP089942.1 Protein Homology CDS 1851436 1852404 . - 0 ID=cds-WP_016189679.1;Parent=gene-LU604_RS09765;Dbxref=Genbank:WP_016189679.1;Name=WP_016189679.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849329.1;locus_tag=LU604_RS09765;product=thioredoxin-disulfide reductase;protein_id=WP_016189679.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1852498 1852815 . - . ID=gene-LU604_RS09770;Name=LU604_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09770;old_locus_tag=LU604_09770 NZ_CP089942.1 GeneMarkS-2+ CDS 1852498 1852815 . - 0 ID=cds-WP_152664173.1;Parent=gene-LU604_RS09770;Dbxref=Genbank:WP_152664173.1;Name=WP_152664173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09770;product=hypothetical protein;protein_id=WP_152664173.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1852933 1853427 . + . ID=gene-LU604_RS09775;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=LU604_RS09775;old_locus_tag=LU604_09775 NZ_CP089942.1 Protein Homology CDS 1852933 1853427 . + 0 ID=cds-WP_006118610.1;Parent=gene-LU604_RS09775;Dbxref=Genbank:WP_006118610.1;Name=WP_006118610.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=LU604_RS09775;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_006118610.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1853546 1856875 . + . ID=gene-LU604_RS09780;Name=LU604_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09780;old_locus_tag=LU604_09780 NZ_CP089942.1 Protein Homology CDS 1853546 1856875 . + 0 ID=cds-WP_040465274.1;Parent=gene-LU604_RS09780;Dbxref=Genbank:WP_040465274.1;Name=WP_040465274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025228.1;locus_tag=LU604_RS09780;product=DNA translocase FtsK 4TM domain-containing protein;protein_id=WP_040465274.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1857080 1857691 . + . ID=gene-LU604_RS09785;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=LU604_RS09785;old_locus_tag=LU604_09785 NZ_CP089942.1 Protein Homology CDS 1857080 1857691 . + 0 ID=cds-WP_233480503.1;Parent=gene-LU604_RS09785;Dbxref=Genbank:WP_233480503.1;Name=WP_233480503.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226102.1;locus_tag=LU604_RS09785;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_233480503.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1857757 1859046 . + . ID=gene-LU604_RS09790;Name=LU604_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09790;old_locus_tag=LU604_09790 NZ_CP089942.1 Protein Homology CDS 1857757 1859046 . + 0 ID=cds-WP_046372255.1;Parent=gene-LU604_RS09790;Dbxref=Genbank:WP_046372255.1;Name=WP_046372255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201517.1;locus_tag=LU604_RS09790;product=replication-associated recombination protein A;protein_id=WP_046372255.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1859138 1860430 . + . ID=gene-LU604_RS09795;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=LU604_RS09795;old_locus_tag=LU604_09795 NZ_CP089942.1 Protein Homology CDS 1859138 1860430 . + 0 ID=cds-WP_016189675.1;Parent=gene-LU604_RS09795;Dbxref=Genbank:WP_016189675.1;Name=WP_016189675.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006116.1;locus_tag=LU604_RS09795;product=serine--tRNA ligase;protein_id=WP_016189675.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1860761 1861912 . + . ID=gene-LU604_RS09800;Name=LU604_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09800;old_locus_tag=LU604_09800 NZ_CP089942.1 Protein Homology CDS 1860761 1861912 . + 0 ID=cds-WP_233480504.1;Parent=gene-LU604_RS09800;Dbxref=Genbank:WP_233480504.1;Name=WP_233480504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831279.1;locus_tag=LU604_RS09800;product=MFS transporter;protein_id=WP_233480504.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1861940 1862680 . - . ID=gene-LU604_RS09805;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=LU604_RS09805;old_locus_tag=LU604_09805 NZ_CP089942.1 Protein Homology CDS 1861940 1862680 . - 0 ID=cds-WP_016189673.1;Parent=gene-LU604_RS09805;Dbxref=Genbank:WP_016189673.1;Name=WP_016189673.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226110.1;locus_tag=LU604_RS09805;product=pyruvate formate lyase 1-activating protein;protein_id=WP_016189673.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1862835 1865117 . - . ID=gene-LU604_RS09810;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=LU604_RS09810;old_locus_tag=LU604_09810 NZ_CP089942.1 Protein Homology CDS 1862835 1865117 . - 0 ID=cds-WP_016189672.1;Parent=gene-LU604_RS09810;Dbxref=Genbank:WP_016189672.1;Name=WP_016189672.1;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=LU604_RS09810;product=formate C-acetyltransferase;protein_id=WP_016189672.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1865197 1866051 . - . ID=gene-LU604_RS09815;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=LU604_RS09815;old_locus_tag=LU604_09815 NZ_CP089942.1 Protein Homology CDS 1865197 1866051 . - 0 ID=cds-WP_016189671.1;Parent=gene-LU604_RS09815;Dbxref=Genbank:WP_016189671.1;Name=WP_016189671.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211331.1;locus_tag=LU604_RS09815;product=formate transporter FocA;protein_id=WP_016189671.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1866420 1868177 . - . ID=gene-LU604_RS09820;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=LU604_RS09820;old_locus_tag=LU604_09820 NZ_CP089942.1 Protein Homology CDS 1866420 1868177 . - 0 ID=cds-WP_233480505.1;Parent=gene-LU604_RS09820;Dbxref=Genbank:WP_233480505.1;Name=WP_233480505.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169356.1;locus_tag=LU604_RS09820;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_233480505.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1868486 1869571 . + . ID=gene-LU604_RS09825;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=LU604_RS09825;old_locus_tag=LU604_09825 NZ_CP089942.1 Protein Homology CDS 1868486 1869571 . + 0 ID=cds-WP_016189669.1;Parent=gene-LU604_RS09825;Dbxref=Genbank:WP_016189669.1;Name=WP_016189669.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441862.1;locus_tag=LU604_RS09825;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_016189669.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1869654 1870940 . + . ID=gene-LU604_RS09830;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=LU604_RS09830;old_locus_tag=LU604_09830 NZ_CP089942.1 Protein Homology CDS 1869654 1870940 . + 0 ID=cds-WP_016189668.1;Parent=gene-LU604_RS09830;Dbxref=Genbank:WP_016189668.1;Name=WP_016189668.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668558.1;locus_tag=LU604_RS09830;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_016189668.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1871126 1871809 . + . ID=gene-LU604_RS09835;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=LU604_RS09835;old_locus_tag=LU604_09835 NZ_CP089942.1 Protein Homology CDS 1871126 1871809 . + 0 ID=cds-WP_016189667.1;Parent=gene-LU604_RS09835;Dbxref=Genbank:WP_016189667.1;Name=WP_016189667.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309020.1;locus_tag=LU604_RS09835;product=(d)CMP kinase;protein_id=WP_016189667.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1871913 1873586 . + . ID=gene-LU604_RS09840;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=LU604_RS09840;old_locus_tag=LU604_09840 NZ_CP089942.1 Protein Homology CDS 1871913 1873586 . + 0 ID=cds-WP_233480775.1;Parent=gene-LU604_RS09840;Dbxref=Genbank:WP_233480775.1;Name=WP_233480775.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=LU604_RS09840;product=30S ribosomal protein S1;protein_id=WP_233480775.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1873675 1873959 . + . ID=gene-LU604_RS09845;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=LU604_RS09845;old_locus_tag=LU604_09845 NZ_CP089942.1 Protein Homology CDS 1873675 1873959 . + 0 ID=cds-WP_016189665.1;Parent=gene-LU604_RS09845;Dbxref=Genbank:WP_016189665.1;Name=WP_016189665.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfB;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=LU604_RS09845;product=integration host factor subunit beta;protein_id=WP_016189665.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1874140 1874559 . + . ID=gene-LU604_RS09850;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS09850;old_locus_tag=LU604_09850 NZ_CP089942.1 Protein Homology CDS 1874140 1874559 . + 0 ID=cds-WP_233480506.1;Parent=gene-LU604_RS09850;Dbxref=Genbank:WP_233480506.1;Name=WP_233480506.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU604_RS09850;product=IS200/IS605 family transposase;protein_id=WP_233480506.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1874871 1877129 . + . ID=gene-LU604_RS09855;Name=LU604_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09855;old_locus_tag=LU604_09855 NZ_CP089942.1 Protein Homology CDS 1874871 1877129 . + 0 ID=cds-WP_233480507.1;Parent=gene-LU604_RS09855;Dbxref=Genbank:WP_233480507.1;Name=WP_233480507.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189663.1;locus_tag=LU604_RS09855;product=ComEC family protein;protein_id=WP_233480507.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1877164 1878915 . + . ID=gene-LU604_RS09860;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=LU604_RS09860;old_locus_tag=LU604_09860 NZ_CP089942.1 Protein Homology CDS 1877164 1878915 . + 0 ID=cds-WP_016189662.1;Parent=gene-LU604_RS09860;Dbxref=Genbank:WP_016189662.1;Name=WP_016189662.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309024.1;locus_tag=LU604_RS09860;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_016189662.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1878908 1879888 . + . ID=gene-LU604_RS09865;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=LU604_RS09865;old_locus_tag=LU604_09865 NZ_CP089942.1 Protein Homology CDS 1878908 1879888 . + 0 ID=cds-WP_016189661.1;Parent=gene-LU604_RS09865;Dbxref=Genbank:WP_016189661.1;Name=WP_016189661.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802465.1;locus_tag=LU604_RS09865;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_016189661.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1879932 1881140 . + . ID=gene-LU604_RS09870;Name=LU604_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09870;old_locus_tag=LU604_09870 NZ_CP089942.1 Protein Homology CDS 1879932 1881140 . + 0 ID=cds-WP_233480508.1;Parent=gene-LU604_RS09870;Dbxref=Genbank:WP_233480508.1;Name=WP_233480508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201532.1;locus_tag=LU604_RS09870;product=winged helix DNA-binding domain-containing protein;protein_id=WP_233480508.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1881225 1881407 . + . ID=gene-LU604_RS09875;Name=LU604_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09875;old_locus_tag=LU604_09875 NZ_CP089942.1 Protein Homology CDS 1881225 1881407 . + 0 ID=cds-WP_016189658.1;Parent=gene-LU604_RS09875;Dbxref=Genbank:WP_016189658.1;Name=WP_016189658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013508517.1;locus_tag=LU604_RS09875;product=hypothetical protein;protein_id=WP_016189658.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1881404 1882150 . + . ID=gene-LU604_RS09880;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=LU604_RS09880;old_locus_tag=LU604_09880 NZ_CP089942.1 Protein Homology CDS 1881404 1882150 . + 0 ID=cds-WP_233480509.1;Parent=gene-LU604_RS09880;Dbxref=Genbank:WP_233480509.1;Name=WP_233480509.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704633.1;locus_tag=LU604_RS09880;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_233480509.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1882347 1882490 . + . ID=gene-LU604_RS09885;Name=LU604_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09885;old_locus_tag=LU604_09885 NZ_CP089942.1 GeneMarkS-2+ CDS 1882347 1882490 . + 0 ID=cds-WP_233480510.1;Parent=gene-LU604_RS09885;Dbxref=Genbank:WP_233480510.1;Name=WP_233480510.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09885;product=hypothetical protein;protein_id=WP_233480510.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1882618 1882830 . + . ID=gene-LU604_RS09890;Name=LU604_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09890;old_locus_tag=LU604_09890 NZ_CP089942.1 GeneMarkS-2+ CDS 1882618 1882830 . + 0 ID=cds-WP_233480511.1;Parent=gene-LU604_RS09890;Dbxref=Genbank:WP_233480511.1;Name=WP_233480511.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09890;product=hypothetical protein;protein_id=WP_233480511.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1882986 1883747 . - . ID=gene-LU604_RS09895;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=LU604_RS09895;old_locus_tag=LU604_09895 NZ_CP089942.1 Protein Homology CDS 1882986 1883747 . - 0 ID=cds-WP_233480512.1;Parent=gene-LU604_RS09895;Dbxref=Genbank:WP_233480512.1;Name=WP_233480512.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189654.1;locus_tag=LU604_RS09895;product=envelope biogenesis factor ElyC;protein_id=WP_233480512.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1883876 1884664 . + . ID=gene-LU604_RS09900;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=LU604_RS09900;old_locus_tag=LU604_09900 NZ_CP089942.1 Protein Homology CDS 1883876 1884664 . + 0 ID=cds-WP_233480513.1;Parent=gene-LU604_RS09900;Dbxref=Genbank:WP_233480513.1;Name=WP_233480513.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169371.1;locus_tag=LU604_RS09900;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_233480513.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1884657 1885979 . + . ID=gene-LU604_RS09905;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=LU604_RS09905;old_locus_tag=LU604_09905 NZ_CP089942.1 Protein Homology CDS 1884657 1885979 . + 0 ID=cds-WP_016189652.1;Parent=gene-LU604_RS09905;Dbxref=Genbank:WP_016189652.1;Name=WP_016189652.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=LU604_RS09905;product=chromosome partition protein MukF;protein_id=WP_016189652.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1885960 1886676 . + . ID=gene-LU604_RS09910;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=LU604_RS09910;old_locus_tag=LU604_09910 NZ_CP089942.1 Protein Homology CDS 1885960 1886676 . + 0 ID=cds-WP_016189651.1;Parent=gene-LU604_RS09910;Dbxref=Genbank:WP_016189651.1;Name=WP_016189651.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004385487.1;locus_tag=LU604_RS09910;product=chromosome partition protein MukE;protein_id=WP_016189651.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1886669 1891132 . + . ID=gene-LU604_RS09915;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=LU604_RS09915;old_locus_tag=LU604_09915 NZ_CP089942.1 Protein Homology CDS 1886669 1891132 . + 0 ID=cds-WP_233481564.1;Parent=gene-LU604_RS09915;Dbxref=Genbank:WP_233481564.1;Name=WP_233481564.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189650.1;locus_tag=LU604_RS09915;product=chromosome partition protein MukB;protein_id=WP_233481564.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1891382 1893121 . + . ID=gene-LU604_RS09920;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=LU604_RS09920;old_locus_tag=LU604_09920 NZ_CP089942.1 Protein Homology CDS 1891382 1893121 . + 0 ID=cds-WP_233480776.1;Parent=gene-LU604_RS09920;Dbxref=Genbank:WP_233480776.1;Name=WP_233480776.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713308.1;locus_tag=LU604_RS09920;product=L%2CD-transpeptidase;protein_id=WP_233480776.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1893308 1893856 . + . ID=gene-LU604_RS09925;Name=LU604_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09925;old_locus_tag=LU604_09925 NZ_CP089942.1 Protein Homology CDS 1893308 1893856 . + 0 ID=cds-WP_016189648.1;Parent=gene-LU604_RS09925;Dbxref=Genbank:WP_016189648.1;Name=WP_016189648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849393.1;locus_tag=LU604_RS09925;product=YcbK family protein;protein_id=WP_016189648.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1893895 1894524 . + . ID=gene-LU604_RS09930;Name=LU604_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09930;old_locus_tag=LU604_09930 NZ_CP089942.1 Protein Homology CDS 1893895 1894524 . + 0 ID=cds-WP_233480515.1;Parent=gene-LU604_RS09930;Dbxref=Genbank:WP_233480515.1;Name=WP_233480515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357330.1;locus_tag=LU604_RS09930;product=MBL fold metallo-hydrolase;protein_id=WP_233480515.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1894659 1895105 . + . ID=gene-LU604_RS09935;Name=LU604_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09935;old_locus_tag=LU604_09935 NZ_CP089942.1 GeneMarkS-2+ CDS 1894659 1895105 . + 0 ID=cds-WP_152664172.1;Parent=gene-LU604_RS09935;Dbxref=Genbank:WP_152664172.1;Name=WP_152664172.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS09935;product=hypothetical protein;protein_id=WP_152664172.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1895637 1896827 . - . ID=gene-LU604_RS09940;Name=LU604_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09940;old_locus_tag=LU604_09940 NZ_CP089942.1 Protein Homology CDS 1895637 1896827 . - 0 ID=cds-WP_233480516.1;Parent=gene-LU604_RS09940;Dbxref=Genbank:WP_233480516.1;Name=WP_233480516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816042.1;locus_tag=LU604_RS09940;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=WP_233480516.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1897099 1897539 . + . ID=gene-LU604_RS09945;Name=tnpA;end_range=1897539,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS09945;old_locus_tag=LU604_09945;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1897099 1897539 . + 0 ID=cds-LU604_RS09945;Parent=gene-LU604_RS09945;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1897539,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU604_RS09945;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1897625 1898731 . - . ID=gene-LU604_RS09950;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=LU604_RS09950;old_locus_tag=LU604_09950 NZ_CP089942.1 Protein Homology CDS 1897625 1898731 . - 0 ID=cds-WP_016189642.1;Parent=gene-LU604_RS09950;Dbxref=Genbank:WP_016189642.1;Name=WP_016189642.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_119863614.1;locus_tag=LU604_RS09950;product=porin OmpC;protein_id=WP_016189642.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1899032 1900432 . - . ID=gene-LU604_RS09955;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=LU604_RS09955;old_locus_tag=LU604_09955 NZ_CP089942.1 Protein Homology CDS 1899032 1900432 . - 0 ID=cds-WP_233480517.1;Parent=gene-LU604_RS09955;Dbxref=Genbank:WP_233480517.1;Name=WP_233480517.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=LU604_RS09955;product=asparagine--tRNA ligase;protein_id=WP_233480517.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1900606 1901811 . - . ID=gene-LU604_RS09960;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=LU604_RS09960;old_locus_tag=LU604_09960 NZ_CP089942.1 Protein Homology CDS 1900606 1901811 . - 0 ID=cds-WP_016189640.1;Parent=gene-LU604_RS09960;Dbxref=Genbank:WP_016189640.1;Name=WP_016189640.1;Ontology_term=GO:0019358,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=nicotinate nucleotide salvage|0019358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812313.1;locus_tag=LU604_RS09960;product=nicotinate phosphoribosyltransferase;protein_id=WP_016189640.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1902072 1904687 . + . ID=gene-LU604_RS09965;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=LU604_RS09965;old_locus_tag=LU604_09965 NZ_CP089942.1 Protein Homology CDS 1902072 1904687 . + 0 ID=cds-WP_233480518.1;Parent=gene-LU604_RS09965;Dbxref=Genbank:WP_233480518.1;Name=WP_233480518.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189629.1;locus_tag=LU604_RS09965;product=aminopeptidase N;protein_id=WP_233480518.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1904947 1905090 . - . ID=gene-LU604_RS09970;Name=LU604_RS09970;end_range=1905090,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS09970;old_locus_tag=LU604_09970;partial=true;pseudo=true;start_range=.,1904947 NZ_CP089942.1 Protein Homology CDS 1904947 1905090 . - 0 ID=cds-LU604_RS09970;Parent=gene-LU604_RS09970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1905090,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001244308.1;locus_tag=LU604_RS09970;partial=true;product=aliphatic sulfonate ABC transporter substrate-binding protein;pseudo=true;start_range=.,1904947;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1905106 1905803 . - . ID=gene-LU604_RS09975;Name=LU604_RS09975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS09975;old_locus_tag=LU604_09975;pseudo=true NZ_CP089942.1 Protein Homology CDS 1905106 1905803 . - 0 ID=cds-LU604_RS09975;Parent=gene-LU604_RS09975;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS09975;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1905856 1906056 . - . ID=gene-LU604_RS09980;Name=LU604_RS09980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS09980;old_locus_tag=LU604_09980;partial=true;pseudo=true;start_range=.,1905856 NZ_CP089942.1 Protein Homology CDS 1905856 1906056 . - 0 ID=cds-LU604_RS09980;Parent=gene-LU604_RS09980;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172404.1;locus_tag=LU604_RS09980;partial=true;product=aliphatic sulfonate ABC transporter substrate-binding protein;pseudo=true;start_range=.,1905856;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1906067 1906608 . - . ID=gene-LU604_RS09985;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=pseudogene;locus_tag=LU604_RS09985;old_locus_tag=LU604_09985;pseudo=true NZ_CP089942.1 Protein Homology CDS 1906067 1906608 . - 0 ID=cds-LU604_RS09985;Parent=gene-LU604_RS09985;Note=frameshifted;Ontology_term=GO:0046306,GO:0008752;gbkey=CDS;gene=ssuE;go_function=FMN reductase activity|0008752||IEA;go_process=alkanesulfonate catabolic process|0046306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802487.1;locus_tag=LU604_RS09985;product=NADPH-dependent FMN reductase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1906986 1907996 . + . ID=gene-LU604_RS09990;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=LU604_RS09990;old_locus_tag=LU604_09990 NZ_CP089942.1 Protein Homology CDS 1906986 1907996 . + 0 ID=cds-WP_040465365.1;Parent=gene-LU604_RS09990;Dbxref=Genbank:WP_040465365.1;Name=WP_040465365.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309056.1;locus_tag=LU604_RS09990;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_040465365.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1908158 1908703 . + . ID=gene-LU604_RS09995;Name=LU604_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS09995;old_locus_tag=LU604_09995 NZ_CP089942.1 Protein Homology CDS 1908158 1908703 . + 0 ID=cds-WP_233480519.1;Parent=gene-LU604_RS09995;Dbxref=Genbank:WP_233480519.1;Name=WP_233480519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015700640.1;locus_tag=LU604_RS09995;product=cell division protein ZapC;protein_id=WP_233480519.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1909366 1911483 . + . ID=gene-LU604_RS10000;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=LU604_RS10000;old_locus_tag=LU604_10000 NZ_CP089942.1 Protein Homology CDS 1909366 1911483 . + 0 ID=cds-WP_233480777.1;Parent=gene-LU604_RS10000;Dbxref=Genbank:WP_233480777.1;Name=WP_233480777.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169389.1;locus_tag=LU604_RS10000;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_233480777.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1911489 1913399 . + . ID=gene-LU604_RS10005;Name=LU604_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10005;old_locus_tag=LU604_10005 NZ_CP089942.1 Protein Homology CDS 1911489 1913399 . + 0 ID=cds-WP_233480520.1;Parent=gene-LU604_RS10005;Dbxref=Genbank:WP_233480520.1;Name=WP_233480520.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189622.1;locus_tag=LU604_RS10005;product=ABC transporter ATP-binding protein;protein_id=WP_233480520.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1913428 1914702 . + . ID=gene-LU604_RS10010;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=LU604_RS10010;old_locus_tag=LU604_10010 NZ_CP089942.1 Protein Homology CDS 1913428 1914702 . + 0 ID=cds-WP_016189621.1;Parent=gene-LU604_RS10010;Dbxref=Genbank:WP_016189621.1;Name=WP_016189621.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156975.1;locus_tag=LU604_RS10010;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_016189621.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1914689 1916329 . + . ID=gene-LU604_RS10015;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=LU604_RS10015;old_locus_tag=LU604_10015 NZ_CP089942.1 Protein Homology CDS 1914689 1916329 . + 0 ID=cds-WP_016189620.1;Parent=gene-LU604_RS10015;Dbxref=Genbank:WP_016189620.1;Name=WP_016189620.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172408.1;locus_tag=LU604_RS10015;product=intermembrane transport protein PqiB;protein_id=WP_016189620.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1916329 1916955 . + . ID=gene-LU604_RS10020;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=LU604_RS10020;old_locus_tag=LU604_10020 NZ_CP089942.1 Protein Homology CDS 1916329 1916955 . + 0 ID=cds-WP_233480521.1;Parent=gene-LU604_RS10020;Dbxref=Genbank:WP_233480521.1;Name=WP_233480521.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169393.1;locus_tag=LU604_RS10020;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_233480521.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1917354 1917521 . + . ID=gene-LU604_RS10025;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=LU604_RS10025;old_locus_tag=LU604_10025 NZ_CP089942.1 Protein Homology CDS 1917354 1917521 . + 0 ID=cds-WP_016189618.1;Parent=gene-LU604_RS10025;Dbxref=Genbank:WP_016189618.1;Name=WP_016189618.1;gbkey=CDS;gene=rmf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=LU604_RS10025;product=ribosome modulation factor;protein_id=WP_016189618.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1917623 1918141 . - . ID=gene-LU604_RS10030;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=LU604_RS10030;old_locus_tag=LU604_10030 NZ_CP089942.1 Protein Homology CDS 1917623 1918141 . - 0 ID=cds-WP_233480522.1;Parent=gene-LU604_RS10030;Dbxref=Genbank:WP_233480522.1;Name=WP_233480522.1;Ontology_term=GO:0006633,GO:0008693;gbkey=CDS;gene=fabA;go_function=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity|0008693||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415474.1;locus_tag=LU604_RS10030;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_233480522.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1918209 1920008 . - . ID=gene-LU604_RS10035;Name=LU604_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10035;old_locus_tag=LU604_10035 NZ_CP089942.1 Protein Homology CDS 1918209 1920008 . - 0 ID=cds-WP_233480523.1;Parent=gene-LU604_RS10035;Dbxref=Genbank:WP_233480523.1;Name=WP_233480523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007887360.1;locus_tag=LU604_RS10035;product=Lon protease family protein;protein_id=WP_233480523.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1920151 1920627 . + . ID=gene-LU604_RS10040;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=LU604_RS10040;old_locus_tag=LU604_10040 NZ_CP089942.1 Protein Homology CDS 1920151 1920627 . + 0 ID=cds-WP_016189615.1;Parent=gene-LU604_RS10040;Dbxref=Genbank:WP_016189615.1;Name=WP_016189615.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606174.1;locus_tag=LU604_RS10040;product=macrodomain Ter protein MatP;protein_id=WP_016189615.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1920802 1921863 . - . ID=gene-LU604_RS10045;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=LU604_RS10045;old_locus_tag=LU604_10045 NZ_CP089942.1 Protein Homology CDS 1920802 1921863 . - 0 ID=cds-WP_233480524.1;Parent=gene-LU604_RS10045;Dbxref=Genbank:WP_233480524.1;Name=WP_233480524.1;Ontology_term=GO:0015288;gbkey=CDS;gene=ompA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942790.1;locus_tag=LU604_RS10045;product=porin OmpA;protein_id=WP_233480524.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1922211 1922720 . - . ID=gene-LU604_RS10050;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=LU604_RS10050;old_locus_tag=LU604_10050 NZ_CP089942.1 Protein Homology CDS 1922211 1922720 . - 0 ID=cds-WP_016189613.1;Parent=gene-LU604_RS10050;Dbxref=Genbank:WP_016189613.1;Name=WP_016189613.1;gbkey=CDS;gene=sulA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169397.1;locus_tag=LU604_RS10050;product=cell division inhibitor SulA;protein_id=WP_016189613.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1922923 1923561 . + . ID=gene-LU604_RS10055;Name=LU604_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10055;old_locus_tag=LU604_10055 NZ_CP089942.1 Protein Homology CDS 1922923 1923561 . + 0 ID=cds-WP_016189612.1;Parent=gene-LU604_RS10055;Dbxref=Genbank:WP_016189612.1;Name=WP_016189612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802503.1;locus_tag=LU604_RS10055;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_016189612.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1923521 1924843 . - . ID=gene-LU604_RS10060;Name=yccS;end_range=1924843,.;gbkey=Gene;gene=yccS;gene_biotype=pseudogene;locus_tag=LU604_RS10060;old_locus_tag=LU604_10060;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1923521 1924843 . - 0 ID=cds-LU604_RS10060;Parent=gene-LU604_RS10060;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016020;end_range=1924843,.;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007768456.1;locus_tag=LU604_RS10060;partial=true;product=YccS family putative transporter;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1924858 1925555 . - . ID=gene-LU604_RS10065;Name=LU604_RS10065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS10065;old_locus_tag=LU604_10065;pseudo=true NZ_CP089942.1 Protein Homology CDS 1924858 1925555 . - 0 ID=cds-LU604_RS10065;Parent=gene-LU604_RS10065;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS10065;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1925604 1926331 . - . ID=gene-LU604_RS10070;Name=LU604_RS10070;end_range=1926331,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS10070;old_locus_tag=LU604_10070;partial=true;pseudo=true;start_range=.,1925604 NZ_CP089942.1 Protein Homology CDS 1925604 1926331 . - 0 ID=cds-LU604_RS10070;Parent=gene-LU604_RS10070;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1926331,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172409.1;locus_tag=LU604_RS10070;partial=true;product=TIGR01666 family membrane protein;pseudo=true;start_range=.,1925604;transl_table=11 NZ_CP089942.1 RefSeq gene 1926371 1927572 . + . ID=gene-LU604_RS10075;Name=LU604_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10075;old_locus_tag=LU604_10075 NZ_CP089942.1 Protein Homology CDS 1926371 1926662 . + 0 ID=cds-WP_233480525.1;Parent=gene-LU604_RS10075;Dbxref=Genbank:WP_233480525.1;Name=WP_233480525.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611429.1;locus_tag=LU604_RS10075;product=IS3 family transposase;protein_id=WP_233480525.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 1926662 1927572 . + 2 ID=cds-WP_233480525.1;Parent=gene-LU604_RS10075;Dbxref=Genbank:WP_233480525.1;Name=WP_233480525.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611429.1;locus_tag=LU604_RS10075;product=IS3 family transposase;protein_id=WP_233480525.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1927720 1928166 . - . ID=gene-LU604_RS10080;Name=LU604_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10080;old_locus_tag=LU604_10080 NZ_CP089942.1 Protein Homology CDS 1927720 1928166 . - 0 ID=cds-WP_016189607.1;Parent=gene-LU604_RS10080;Dbxref=Genbank:WP_016189607.1;Name=WP_016189607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201569.1;locus_tag=LU604_RS10080;product=YccF domain-containing protein;protein_id=WP_016189607.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1928298 1930352 . + . ID=gene-LU604_RS10085;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=LU604_RS10085;old_locus_tag=LU604_10085 NZ_CP089942.1 Protein Homology CDS 1928298 1930352 . + 0 ID=cds-WP_233480778.1;Parent=gene-LU604_RS10085;Dbxref=Genbank:WP_233480778.1;Name=WP_233480778.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320717.1;locus_tag=LU604_RS10085;product=DNA helicase IV;protein_id=WP_233480778.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1931080 1932120 . - . ID=gene-LU604_RS10090;Name=LU604_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10090;old_locus_tag=LU604_10090 NZ_CP089942.1 Protein Homology CDS 1931080 1932120 . - 0 ID=cds-WP_233480526.1;Parent=gene-LU604_RS10090;Dbxref=Genbank:WP_233480526.1;Name=WP_233480526.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS10090;product=IS481 family transposase;protein_id=WP_233480526.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1932199 1932561 . - . ID=gene-LU604_RS10095;Name=LU604_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10095;old_locus_tag=LU604_10095 NZ_CP089942.1 Protein Homology CDS 1932199 1932561 . - 0 ID=cds-WP_233480527.1;Parent=gene-LU604_RS10095;Dbxref=Genbank:WP_233480527.1;Name=WP_233480527.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021358.2;locus_tag=LU604_RS10095;product=DUF2057 family protein;protein_id=WP_233480527.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1932565 1933773 . + . ID=gene-LU604_RS10100;Name=LU604_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10100;old_locus_tag=LU604_10100 NZ_CP089942.1 Protein Homology CDS 1932565 1933773 . + 0 ID=cds-WP_233481565.1;Parent=gene-LU604_RS10100;Dbxref=Genbank:WP_233481565.1;Name=WP_233481565.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS10100;product=IS256 family transposase;protein_id=WP_233481565.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1933810 1933998 . - . ID=gene-LU604_RS10105;Name=LU604_RS10105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS10105;old_locus_tag=LU604_10105;partial=true;pseudo=true;start_range=.,1933810 NZ_CP089942.1 Protein Homology CDS 1933810 1933998 . - 0 ID=cds-LU604_RS10105;Parent=gene-LU604_RS10105;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169403.1;locus_tag=LU604_RS10105;partial=true;product=DUF2057 family protein;pseudo=true;start_range=.,1933810;transl_table=11 NZ_CP089942.1 RefSeq gene 1934195 1934892 . + . ID=gene-LU604_RS10110;Name=LU604_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10110;old_locus_tag=LU604_10110 NZ_CP089942.1 Protein Homology CDS 1934195 1934444 . + 0 ID=cds-WP_233480529.1;Parent=gene-LU604_RS10110;Dbxref=Genbank:WP_233480529.1;Name=WP_233480529.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS10110;product=IS1 family transposase;protein_id=WP_233480529.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 1934444 1934892 . + 2 ID=cds-WP_233480529.1;Parent=gene-LU604_RS10110;Dbxref=Genbank:WP_233480529.1;Name=WP_233480529.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS10110;product=IS1 family transposase;protein_id=WP_233480529.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1934956 1935369 . + . ID=gene-LU604_RS10115;Name=LU604_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10115;old_locus_tag=LU604_10115 NZ_CP089942.1 Protein Homology CDS 1934956 1935369 . + 0 ID=cds-WP_233481566.1;Parent=gene-LU604_RS10115;Dbxref=Genbank:WP_233481566.1;Name=WP_233481566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006189.1;locus_tag=LU604_RS10115;product=CoA-binding protein;protein_id=WP_233481566.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1935382 1935698 . - . ID=gene-LU604_RS10120;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=pseudogene;locus_tag=LU604_RS10120;old_locus_tag=LU604_10120;pseudo=true NZ_CP089942.1 Protein Homology CDS 1935382 1935698 . - 0 ID=cds-LU604_RS10120;Parent=gene-LU604_RS10120;Note=frameshifted;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535677.1;locus_tag=LU604_RS10120;product=heat shock protein HspQ;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1935757 1936947 . - . ID=gene-LU604_RS10125;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=LU604_RS10125;old_locus_tag=LU604_10125 NZ_CP089942.1 Protein Homology CDS 1935757 1936947 . - 0 ID=cds-WP_016189602.1;Parent=gene-LU604_RS10125;Dbxref=Genbank:WP_016189602.1;Name=WP_016189602.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415487.4;locus_tag=LU604_RS10125;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_016189602.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1937035 1937312 . + . ID=gene-LU604_RS10130;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=pseudogene;locus_tag=LU604_RS10130;old_locus_tag=LU604_10130;pseudo=true NZ_CP089942.1 Protein Homology CDS 1937035 1937312 . + 0 ID=cds-LU604_RS10130;Parent=gene-LU604_RS10130;Note=frameshifted;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201576.1;locus_tag=LU604_RS10130;product=acylphosphatase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1937355 1937681 . - . ID=gene-LU604_RS10135;Name=LU604_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10135;old_locus_tag=LU604_10135 NZ_CP089942.1 Protein Homology CDS 1937355 1937681 . - 0 ID=cds-WP_016189600.1;Parent=gene-LU604_RS10135;Dbxref=Genbank:WP_016189600.1;Name=WP_016189600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357366.1;locus_tag=LU604_RS10135;product=TusE/DsrC/DsvC family sulfur relay protein;protein_id=WP_016189600.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1937801 1938457 . - . ID=gene-LU604_RS10140;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=LU604_RS10140;old_locus_tag=LU604_10140 NZ_CP089942.1 Protein Homology CDS 1937801 1938457 . - 0 ID=cds-WP_016189599.1;Parent=gene-LU604_RS10140;Dbxref=Genbank:WP_016189599.1;Name=WP_016189599.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172416.1;locus_tag=LU604_RS10140;product=FtsH protease modulator YccA;protein_id=WP_016189599.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1938675 1938762 . + . ID=gene-LU604_RS10145;Name=LU604_RS10145;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS10145;old_locus_tag=LU604_10145 NZ_CP089942.1 tRNAscan-SE tRNA 1938675 1938762 . + . ID=rna-LU604_RS10145;Parent=gene-LU604_RS10145;anticodon=(pos:1938709..1938711);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS10145;product=tRNA-Ser NZ_CP089942.1 tRNAscan-SE exon 1938675 1938762 . + . ID=exon-LU604_RS10145-1;Parent=rna-LU604_RS10145;anticodon=(pos:1938709..1938711);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS10145;product=tRNA-Ser NZ_CP089942.1 RefSeq gene 1939125 1939212 . + . ID=gene-LU604_RS10150;Name=LU604_RS10150;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS10150;old_locus_tag=LU604_10150 NZ_CP089942.1 tRNAscan-SE tRNA 1939125 1939212 . + . ID=rna-LU604_RS10150;Parent=gene-LU604_RS10150;anticodon=(pos:1939159..1939161);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS10150;product=tRNA-Ser NZ_CP089942.1 tRNAscan-SE exon 1939125 1939212 . + . ID=exon-LU604_RS10150-1;Parent=rna-LU604_RS10150;anticodon=(pos:1939159..1939161);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS10150;product=tRNA-Ser NZ_CP089942.1 RefSeq gene 1939652 1941139 . + . ID=gene-LU604_RS10155;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=LU604_RS10155;old_locus_tag=LU604_10155 NZ_CP089942.1 Protein Homology CDS 1939652 1941139 . + 0 ID=cds-WP_233480531.1;Parent=gene-LU604_RS10155;Dbxref=Genbank:WP_233480531.1;Name=WP_233480531.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189598.1;locus_tag=LU604_RS10155;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_233480531.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1941200 1942573 . - . ID=gene-LU604_RS10160;Name=LU604_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10160;old_locus_tag=LU604_10160 NZ_CP089942.1 Protein Homology CDS 1941200 1942573 . - 0 ID=cds-WP_233480532.1;Parent=gene-LU604_RS10160;Dbxref=Genbank:WP_233480532.1;Name=WP_233480532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668504.1;locus_tag=LU604_RS10160;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_233480532.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1943298 1944506 . + . ID=gene-LU604_RS10165;Name=LU604_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10165;old_locus_tag=LU604_10165 NZ_CP089942.1 Protein Homology CDS 1943298 1944506 . + 0 ID=cds-WP_233480533.1;Parent=gene-LU604_RS10165;Dbxref=Genbank:WP_233480533.1;Name=WP_233480533.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS10165;product=IS256 family transposase;protein_id=WP_233480533.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1944606 1944836 . - . ID=gene-LU604_RS10170;Name=LU604_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10170;old_locus_tag=LU604_10170 NZ_CP089942.1 Protein Homology CDS 1944606 1944836 . - 0 ID=cds-WP_016189597.1;Parent=gene-LU604_RS10170;Dbxref=Genbank:WP_016189597.1;Name=WP_016189597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=LU604_RS10170;product=YccJ family protein;protein_id=WP_016189597.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1944857 1945456 . - . ID=gene-LU604_RS10175;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=LU604_RS10175;old_locus_tag=LU604_10175 NZ_CP089942.1 Protein Homology CDS 1944857 1945456 . - 0 ID=cds-WP_016189596.1;Parent=gene-LU604_RS10175;Dbxref=Genbank:WP_016189596.1;Name=WP_016189596.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=LU604_RS10175;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_016189596.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1945952 1946636 . - . ID=gene-LU604_RS10180;Name=LU604_RS10180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS10180;old_locus_tag=LU604_10180;pseudo=true NZ_CP089942.1 Protein Homology CDS 1945952 1946636 . - 0 ID=cds-LU604_RS10180;Parent=gene-LU604_RS10180;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007887320.1;locus_tag=LU604_RS10180;product=isochorismatase family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1946679 1947773 . - . ID=gene-LU604_RS10185;Name=rutA;gbkey=Gene;gene=rutA;gene_biotype=pseudogene;locus_tag=LU604_RS10185;old_locus_tag=LU604_10185;pseudo=true NZ_CP089942.1 Protein Homology CDS 1946679 1947773 . - 0 ID=cds-LU604_RS10185;Parent=gene-LU604_RS10185;Note=internal stop;Ontology_term=GO:0008150,GO:0010181,GO:0016491;gbkey=CDS;gene=rutA;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309285.4;locus_tag=LU604_RS10185;product=pyrimidine utilization protein A;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1948056 1948639 . + . ID=gene-LU604_RS10190;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=pseudogene;locus_tag=LU604_RS10190;old_locus_tag=LU604_10190;pseudo=true NZ_CP089942.1 Protein Homology CDS 1948056 1948639 . + 0 ID=cds-LU604_RS10190;Parent=gene-LU604_RS10190;Note=frameshifted%3B internal stop;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007782744.1;locus_tag=LU604_RS10190;product=HTH-type transcriptional regulator RutR;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1948703 1950100 . - . ID=gene-LU604_RS10195;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=LU604_RS10195;old_locus_tag=LU604_10195 NZ_CP089942.1 Protein Homology CDS 1948703 1950100 . - 0 ID=cds-WP_233480534.1;Parent=gene-LU604_RS10195;Dbxref=Genbank:WP_233480534.1;Name=WP_233480534.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189590.1;locus_tag=LU604_RS10195;product=D-serine/D-alanine/glycine transporter;protein_id=WP_233480534.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1951711 1952721 . - . ID=gene-LU604_RS10200;Name=LU604_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10200;old_locus_tag=LU604_10200 NZ_CP089942.1 Protein Homology CDS 1951711 1952721 . - 0 ID=cds-WP_046372373.1;Parent=gene-LU604_RS10200;Dbxref=Genbank:WP_046372373.1;Name=WP_046372373.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487120.1;locus_tag=LU604_RS10200;product=IS110 family transposase;protein_id=WP_046372373.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1953707 1954105 . + . ID=gene-LU604_RS10205;Name=LU604_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10205;old_locus_tag=LU604_10205 NZ_CP089942.1 Protein Homology CDS 1953707 1954105 . + 0 ID=cds-WP_233480535.1;Parent=gene-LU604_RS10205;Dbxref=Genbank:WP_233480535.1;Name=WP_233480535.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015437.2;locus_tag=LU604_RS10205;product=autoinducer binding domain-containing protein;protein_id=WP_233480535.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1954125 1954277 . + . ID=gene-LU604_RS10210;Name=LU604_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10210;old_locus_tag=LU604_10210 NZ_CP089942.1 Protein Homology CDS 1954125 1954277 . + 0 ID=cds-WP_232426822.1;Parent=gene-LU604_RS10210;Dbxref=Genbank:WP_232426822.1;Name=WP_232426822.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.2;locus_tag=LU604_RS10210;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_232426822.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1954450 1955079 . + . ID=gene-LU604_RS10215;Name=LU604_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10215;old_locus_tag=LU604_10215 NZ_CP089942.1 Protein Homology CDS 1954450 1955079 . + 0 ID=cds-WP_233480536.1;Parent=gene-LU604_RS10215;Dbxref=Genbank:WP_233480536.1;Name=WP_233480536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189588.1;locus_tag=LU604_RS10215;product=autoinducer synthase;protein_id=WP_233480536.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1955320 1955496 . - . ID=gene-LU604_RS10220;Name=LU604_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10220;old_locus_tag=LU604_10220 NZ_CP089942.1 Protein Homology CDS 1955320 1955496 . - 0 ID=cds-WP_233480537.1;Parent=gene-LU604_RS10220;Dbxref=Genbank:WP_233480537.1;Name=WP_233480537.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014467.2;locus_tag=LU604_RS10220;product=tail fiber assembly protein;protein_id=WP_233480537.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1955782 1956441 . + . ID=gene-LU604_RS10225;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=LU604_RS10225;old_locus_tag=LU604_10225 NZ_CP089942.1 Protein Homology CDS 1955782 1956441 . + 0 ID=cds-WP_016189586.1;Parent=gene-LU604_RS10225;Dbxref=Genbank:WP_016189586.1;Name=WP_016189586.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008813142.1;locus_tag=LU604_RS10225;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_016189586.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1956434 1958266 . + . ID=gene-LU604_RS10230;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=LU604_RS10230;old_locus_tag=LU604_10230 NZ_CP089942.1 Protein Homology CDS 1956434 1958266 . + 0 ID=cds-WP_233480538.1;Parent=gene-LU604_RS10230;Dbxref=Genbank:WP_233480538.1;Name=WP_233480538.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310678.2;locus_tag=LU604_RS10230;product=excinuclease ABC subunit UvrC;protein_id=WP_233480538.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1958338 1958886 . + . ID=gene-LU604_RS10235;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=LU604_RS10235;old_locus_tag=LU604_10235 NZ_CP089942.1 Protein Homology CDS 1958338 1958886 . + 0 ID=cds-WP_016189584.1;Parent=gene-LU604_RS10235;Dbxref=Genbank:WP_016189584.1;Name=WP_016189584.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802541.1;locus_tag=LU604_RS10235;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_016189584.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1959035 1959110 . + . ID=gene-LU604_RS10240;Name=LU604_RS10240;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS10240;old_locus_tag=LU604_10240 NZ_CP089942.1 tRNAscan-SE tRNA 1959035 1959110 . + . ID=rna-LU604_RS10240;Parent=gene-LU604_RS10240;anticodon=(pos:1959068..1959070);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS10240;product=tRNA-Gly NZ_CP089942.1 tRNAscan-SE exon 1959035 1959110 . + . ID=exon-LU604_RS10240-1;Parent=rna-LU604_RS10240;anticodon=(pos:1959068..1959070);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS10240;product=tRNA-Gly NZ_CP089942.1 RefSeq gene 1959153 1959226 . + . ID=gene-LU604_RS10245;Name=LU604_RS10245;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS10245;old_locus_tag=LU604_10245 NZ_CP089942.1 tRNAscan-SE tRNA 1959153 1959226 . + . ID=rna-LU604_RS10245;Parent=gene-LU604_RS10245;anticodon=(pos:1959185..1959187);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS10245;product=tRNA-Cys NZ_CP089942.1 tRNAscan-SE exon 1959153 1959226 . + . ID=exon-LU604_RS10245-1;Parent=rna-LU604_RS10245;anticodon=(pos:1959185..1959187);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS10245;product=tRNA-Cys NZ_CP089942.1 RefSeq gene 1959239 1959324 . + . ID=gene-LU604_RS10250;Name=LU604_RS10250;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS10250;old_locus_tag=LU604_10250 NZ_CP089942.1 tRNAscan-SE tRNA 1959239 1959324 . + . ID=rna-LU604_RS10250;Parent=gene-LU604_RS10250;anticodon=(pos:1959273..1959275);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS10250;product=tRNA-Leu NZ_CP089942.1 tRNAscan-SE exon 1959239 1959324 . + . ID=exon-LU604_RS10250-1;Parent=rna-LU604_RS10250;anticodon=(pos:1959273..1959275);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS10250;product=tRNA-Leu NZ_CP089942.1 RefSeq pseudogene 1959488 1960465 . + . ID=gene-LU604_RS10255;Name=LU604_RS10255;end_range=1960465,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS10255;old_locus_tag=LU604_10255;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1959488 1960465 . + 0 ID=cds-LU604_RS10255;Parent=gene-LU604_RS10255;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1960465,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000772652.1;locus_tag=LU604_RS10255;partial=true;product=integrase arm-type DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1960483 1960986 . - . ID=gene-LU604_RS10260;Name=LU604_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10260;old_locus_tag=LU604_10260 NZ_CP089942.1 Protein Homology CDS 1960483 1960986 . - 0 ID=cds-WP_233480539.1;Parent=gene-LU604_RS10260;Dbxref=Genbank:WP_233480539.1;Name=WP_233480539.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU604_RS10260;product=IS1 family transposase;protein_id=WP_233480539.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1961108 1963252 . + . ID=gene-LU604_RS10270;Name=LU604_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10270;old_locus_tag=LU604_10270 NZ_CP089942.1 Protein Homology CDS 1961108 1963252 . + 0 ID=cds-WP_233480540.1;Parent=gene-LU604_RS10270;Dbxref=Genbank:WP_233480540.1;Name=WP_233480540.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015697414.1;locus_tag=LU604_RS10270;product=TonB-dependent siderophore receptor;protein_id=WP_233480540.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1963812 1963979 . + . ID=gene-LU604_RS10275;Name=LU604_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10275;old_locus_tag=LU604_10275 NZ_CP089942.1 Protein Homology CDS 1963812 1963979 . + 0 ID=cds-WP_016189566.1;Parent=gene-LU604_RS10275;Dbxref=Genbank:WP_016189566.1;Name=WP_016189566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357414.1;locus_tag=LU604_RS10275;product=hypothetical protein;protein_id=WP_016189566.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1964515 1964700 . + . ID=gene-LU604_RS10280;Name=LU604_RS10280;end_range=1964700,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS10280;old_locus_tag=LU604_10280;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 1964515 1964700 . + 0 ID=cds-LU604_RS10280;Parent=gene-LU604_RS10280;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1964700,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015740814.1;locus_tag=LU604_RS10280;partial=true;product=phospholipase D family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1964707 1964988 . - . ID=gene-LU604_RS10285;Name=LU604_RS10285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS10285;old_locus_tag=LU604_10285;partial=true;pseudo=true;start_range=.,1964707 NZ_CP089942.1 Protein Homology CDS 1964707 1964988 . - 0 ID=cds-LU604_RS10285;Parent=gene-LU604_RS10285;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS10285;partial=true;product=transposase;pseudo=true;start_range=.,1964707;transl_table=11 NZ_CP089942.1 RefSeq gene 1965059 1965217 . + . ID=gene-LU604_RS10290;Name=LU604_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10290;old_locus_tag=LU604_10290 NZ_CP089942.1 GeneMarkS-2+ CDS 1965059 1965217 . + 0 ID=cds-WP_233480541.1;Parent=gene-LU604_RS10290;Dbxref=Genbank:WP_233480541.1;Name=WP_233480541.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS10290;product=hypothetical protein;protein_id=WP_233480541.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1965221 1966345 . - . ID=gene-LU604_RS10295;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=LU604_RS10295;old_locus_tag=LU604_10295 NZ_CP089942.1 Protein Homology CDS 1965221 1966345 . - 0 ID=cds-WP_016189563.1;Parent=gene-LU604_RS10295;Dbxref=Genbank:WP_016189563.1;Name=WP_016189563.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543959.1;locus_tag=LU604_RS10295;product=glucans biosynthesis protein MdoC;protein_id=WP_016189563.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1966561 1968156 . + . ID=gene-LU604_RS10300;Name=LU604_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10300;old_locus_tag=LU604_10300 NZ_CP089942.1 Protein Homology CDS 1966561 1968156 . + 0 ID=cds-WP_233480542.1;Parent=gene-LU604_RS10300;Dbxref=Genbank:WP_233480542.1;Name=WP_233480542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013034860.1;locus_tag=LU604_RS10300;product=glucan biosynthesis protein G;protein_id=WP_233480542.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1968149 1970716 . + . ID=gene-LU604_RS10305;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=LU604_RS10305;old_locus_tag=LU604_10305 NZ_CP089942.1 Protein Homology CDS 1968149 1970716 . + 0 ID=cds-WP_016189561.1;Parent=gene-LU604_RS10305;Dbxref=Genbank:WP_016189561.1;Name=WP_016189561.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157043.1;locus_tag=LU604_RS10305;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_016189561.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1970854 1971093 . + . ID=gene-LU604_RS10310;Name=LU604_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10310;old_locus_tag=LU604_10310 NZ_CP089942.1 Protein Homology CDS 1970854 1971093 . + 0 ID=cds-WP_040465271.1;Parent=gene-LU604_RS10310;Dbxref=Genbank:WP_040465271.1;Name=WP_040465271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539086.1;locus_tag=LU604_RS10310;product=YceK/YidQ family lipoprotein;protein_id=WP_040465271.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1971100 1971498 . - . ID=gene-LU604_RS10315;Name=LU604_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10315;old_locus_tag=LU604_10315 NZ_CP089942.1 Protein Homology CDS 1971100 1971498 . - 0 ID=cds-WP_016189559.1;Parent=gene-LU604_RS10315;Dbxref=Genbank:WP_016189559.1;Name=WP_016189559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010246413.1;locus_tag=LU604_RS10315;product=MysB family protein;protein_id=WP_016189559.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1971846 1972403 . - . ID=gene-LU604_RS10320;Name=LU604_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10320;old_locus_tag=LU604_10320 NZ_CP089942.1 Protein Homology CDS 1971846 1972403 . - 0 ID=cds-WP_233480543.1;Parent=gene-LU604_RS10320;Dbxref=Genbank:WP_233480543.1;Name=WP_233480543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012883224.1;locus_tag=LU604_RS10320;product=DUF1440 domain-containing protein;protein_id=WP_233480543.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1972678 1973598 . - . ID=gene-LU604_RS10325;Name=LU604_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10325;old_locus_tag=LU604_10325 NZ_CP089942.1 Protein Homology CDS 1972678 1973598 . - 0 ID=cds-WP_016189557.1;Parent=gene-LU604_RS10325;Dbxref=Genbank:WP_016189557.1;Name=WP_016189557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000183364.1;locus_tag=LU604_RS10325;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee;protein_id=WP_016189557.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1974123 1975175 . + . ID=gene-LU604_RS10330;Name=LU604_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10330;old_locus_tag=LU604_10330 NZ_CP089942.1 Protein Homology CDS 1974123 1975175 . + 0 ID=cds-WP_016189556.1;Parent=gene-LU604_RS10330;Dbxref=Genbank:WP_016189556.1;Name=WP_016189556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169444.1;locus_tag=LU604_RS10330;product=rhodanese-related sulfurtransferase;protein_id=WP_016189556.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1975221 1975790 . - . ID=gene-LU604_RS10335;Name=LU604_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10335;old_locus_tag=LU604_10335 NZ_CP089942.1 Protein Homology CDS 1975221 1975790 . - 0 ID=cds-WP_233480779.1;Parent=gene-LU604_RS10335;Dbxref=Genbank:WP_233480779.1;Name=WP_233480779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009090908.1;locus_tag=LU604_RS10335;product=YceI family protein;protein_id=WP_233480779.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1975824 1976378 . - . ID=gene-LU604_RS10340;Name=LU604_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10340;old_locus_tag=LU604_10340 NZ_CP089942.1 Protein Homology CDS 1975824 1976378 . - 0 ID=cds-WP_233480544.1;Parent=gene-LU604_RS10340;Dbxref=Genbank:WP_233480544.1;Name=WP_233480544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455855.1;locus_tag=LU604_RS10340;product=cytochrome b;protein_id=WP_233480544.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1977055 1978221 . + . ID=gene-LU604_RS10345;Name=LU604_RS10345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS10345;old_locus_tag=LU604_10345;pseudo=true NZ_CP089942.1 Protein Homology CDS 1977055 1978221 . + 0 ID=cds-LU604_RS10345;Parent=gene-LU604_RS10345;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851531.1;locus_tag=LU604_RS10345;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1978310 1979422 . - . ID=gene-LU604_RS10350;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=LU604_RS10350;old_locus_tag=LU604_10350 NZ_CP089942.1 Protein Homology CDS 1978310 1979422 . - 0 ID=cds-WP_016189549.1;Parent=gene-LU604_RS10350;Dbxref=Genbank:WP_016189549.1;Name=WP_016189549.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849912.1;locus_tag=LU604_RS10350;product=N-methyl-L-tryptophan oxidase;protein_id=WP_016189549.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1979531 1979785 . - . ID=gene-LU604_RS10355;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=LU604_RS10355;old_locus_tag=LU604_10355 NZ_CP089942.1 Protein Homology CDS 1979531 1979785 . - 0 ID=cds-WP_233480545.1;Parent=gene-LU604_RS10355;Dbxref=Genbank:WP_233480545.1;Name=WP_233480545.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441774.1;locus_tag=LU604_RS10355;product=biofilm formation regulator BssS;protein_id=WP_233480545.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1980111 1980356 . - . ID=gene-LU604_RS10360;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=LU604_RS10360;old_locus_tag=LU604_10360 NZ_CP089942.1 Protein Homology CDS 1980111 1980356 . - 0 ID=cds-WP_233480546.1;Parent=gene-LU604_RS10360;Dbxref=Genbank:WP_233480546.1;Name=WP_233480546.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189547.1;locus_tag=LU604_RS10360;product=DNA damage-inducible protein I;protein_id=WP_233480546.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1980456 1981665 . + . ID=gene-LU604_RS10365;Name=LU604_RS10365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS10365;old_locus_tag=LU604_10365;pseudo=true NZ_CP089942.1 Protein Homology CDS 1980456 1981665 . + 0 ID=cds-LU604_RS10365;Parent=gene-LU604_RS10365;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343760.1;locus_tag=LU604_RS10365;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1981892 1982938 . - . ID=gene-LU604_RS10370;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=LU604_RS10370;old_locus_tag=LU604_10370 NZ_CP089942.1 Protein Homology CDS 1981892 1982938 . - 0 ID=cds-WP_016189544.1;Parent=gene-LU604_RS10370;Dbxref=Genbank:WP_016189544.1;Name=WP_016189544.1;Ontology_term=GO:0009220,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441772.1;locus_tag=LU604_RS10370;product=dihydroorotase;protein_id=WP_016189544.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1983094 1983657 . - . ID=gene-LU604_RS10375;Name=LU604_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10375;old_locus_tag=LU604_10375 NZ_CP089942.1 Protein Homology CDS 1983094 1983657 . - 0 ID=cds-WP_233480547.1;Parent=gene-LU604_RS10375;Dbxref=Genbank:WP_233480547.1;Name=WP_233480547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189543.1;locus_tag=LU604_RS10375;product=lipoprotein;protein_id=WP_233480547.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1983951 1984541 . + . ID=gene-LU604_RS10380;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=LU604_RS10380;old_locus_tag=LU604_10380 NZ_CP089942.1 Protein Homology CDS 1983951 1984541 . + 0 ID=cds-WP_233480780.1;Parent=gene-LU604_RS10380;Dbxref=Genbank:WP_233480780.1;Name=WP_233480780.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010246386.1;locus_tag=LU604_RS10380;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_233480780.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1984547 1985193 . + . ID=gene-LU604_RS10385;Name=LU604_RS10385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS10385;old_locus_tag=LU604_10385;pseudo=true NZ_CP089942.1 Protein Homology CDS 1984547 1985193 . + 0 ID=cds-LU604_RS10385;Parent=gene-LU604_RS10385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009090893.1;locus_tag=LU604_RS10385;product=DUF480 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 1985723 1986040 . + . ID=gene-LU604_RS10390;Name=LU604_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10390;old_locus_tag=LU604_10390 NZ_CP089942.1 GeneMarkS-2+ CDS 1985723 1986040 . + 0 ID=cds-WP_016189539.1;Parent=gene-LU604_RS10390;Dbxref=Genbank:WP_016189539.1;Name=WP_016189539.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS10390;product=hypothetical protein;protein_id=WP_016189539.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1986165 1987703 . + . ID=gene-LU604_RS10395;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=LU604_RS10395;old_locus_tag=LU604_10395 NZ_CP089942.1 Protein Homology CDS 1986165 1987703 . + 0 ID=cds-WP_016189538.1;Parent=gene-LU604_RS10395;Dbxref=Genbank:WP_016189538.1;Name=WP_016189538.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007885822.1;locus_tag=LU604_RS10395;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_016189538.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1987804 1988436 . - . ID=gene-LU604_RS10400;Name=LU604_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10400;old_locus_tag=LU604_10400 NZ_CP089942.1 GeneMarkS-2+ CDS 1987804 1988436 . - 0 ID=cds-WP_016189537.1;Parent=gene-LU604_RS10400;Dbxref=Genbank:WP_016189537.1;Name=WP_016189537.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS10400;product=hypothetical protein;protein_id=WP_016189537.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 1988716 1989507 . - . ID=gene-LU604_RS10405;Name=LU604_RS10405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS10405;old_locus_tag=LU604_10405;partial=true;pseudo=true;start_range=.,1988716 NZ_CP089942.1 Protein Homology CDS 1988716 1989507 . - 0 ID=cds-LU604_RS10405;Parent=gene-LU604_RS10405;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS10405;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,1988716;transl_table=11 NZ_CP089942.1 RefSeq gene 1989960 1990391 . - . ID=gene-LU604_RS10410;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=LU604_RS10410;old_locus_tag=LU604_10410 NZ_CP089942.1 Protein Homology CDS 1989960 1990391 . - 0 ID=cds-WP_016189533.1;Parent=gene-LU604_RS10410;Dbxref=Genbank:WP_016189533.1;Name=WP_016189533.1;Ontology_term=GO:0044780,GO:0005515;gbkey=CDS;gene=flgN;go_function=protein binding|0005515||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025344.1;locus_tag=LU604_RS10410;product=flagellar export chaperone FlgN;protein_id=WP_016189533.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1990396 1990701 . - . ID=gene-LU604_RS10415;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=LU604_RS10415;old_locus_tag=LU604_10415 NZ_CP089942.1 Protein Homology CDS 1990396 1990701 . - 0 ID=cds-WP_016189532.1;Parent=gene-LU604_RS10415;Dbxref=Genbank:WP_016189532.1;Name=WP_016189532.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668457.1;locus_tag=LU604_RS10415;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_016189532.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1990802 1991470 . - . ID=gene-LU604_RS10420;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=LU604_RS10420;old_locus_tag=LU604_10420 NZ_CP089942.1 Protein Homology CDS 1990802 1991470 . - 0 ID=cds-WP_016189531.1;Parent=gene-LU604_RS10420;Dbxref=Genbank:WP_016189531.1;Name=WP_016189531.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668456.1;locus_tag=LU604_RS10420;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_016189531.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1991627 1992037 . + . ID=gene-LU604_RS10425;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=LU604_RS10425;old_locus_tag=LU604_10425 NZ_CP089942.1 Protein Homology CDS 1991627 1992037 . + 0 ID=cds-WP_016189530.1;Parent=gene-LU604_RS10425;Dbxref=Genbank:WP_016189530.1;Name=WP_016189530.1;Ontology_term=GO:0001539,GO:0005198,GO:0009429;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C proximal rod|0009429||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013575163.1;locus_tag=LU604_RS10425;product=flagellar basal body rod protein FlgB;protein_id=WP_016189530.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1992044 1992448 . + . ID=gene-LU604_RS10430;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=LU604_RS10430;old_locus_tag=LU604_10430 NZ_CP089942.1 Protein Homology CDS 1992044 1992448 . + 0 ID=cds-WP_016189529.1;Parent=gene-LU604_RS10430;Dbxref=Genbank:WP_016189529.1;Name=WP_016189529.1;Ontology_term=GO:0001539,GO:0005198,GO:0009425;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309479.1;locus_tag=LU604_RS10430;product=flagellar basal body rod protein FlgC;protein_id=WP_016189529.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1992460 1993143 . + . ID=gene-LU604_RS10435;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=LU604_RS10435;old_locus_tag=LU604_10435 NZ_CP089942.1 Protein Homology CDS 1992460 1993143 . + 0 ID=cds-WP_016189528.1;Parent=gene-LU604_RS10435;Dbxref=Genbank:WP_016189528.1;Name=WP_016189528.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441761.1;locus_tag=LU604_RS10435;product=flagellar hook assembly protein FlgD;protein_id=WP_016189528.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1993171 1994400 . + . ID=gene-LU604_RS10440;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=LU604_RS10440;old_locus_tag=LU604_10440 NZ_CP089942.1 Protein Homology CDS 1993171 1994400 . + 0 ID=cds-WP_016189527.1;Parent=gene-LU604_RS10440;Dbxref=Genbank:WP_016189527.1;Name=WP_016189527.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885873.1;locus_tag=LU604_RS10440;product=flagellar hook protein FlgE;protein_id=WP_016189527.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1994422 1995177 . + . ID=gene-LU604_RS10445;Name=LU604_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10445;old_locus_tag=LU604_10445 NZ_CP089942.1 Protein Homology CDS 1994422 1995177 . + 0 ID=cds-WP_016189526.1;Parent=gene-LU604_RS10445;Dbxref=Genbank:WP_016189526.1;Name=WP_016189526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415595.1;locus_tag=LU604_RS10445;product=flagellar basal body rod protein FlgF;protein_id=WP_016189526.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1995195 1995977 . + . ID=gene-LU604_RS10450;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=LU604_RS10450;old_locus_tag=LU604_10450 NZ_CP089942.1 Protein Homology CDS 1995195 1995977 . + 0 ID=cds-WP_016189525.1;Parent=gene-LU604_RS10450;Dbxref=Genbank:WP_016189525.1;Name=WP_016189525.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460150.1;locus_tag=LU604_RS10450;product=flagellar basal-body rod protein FlgG;protein_id=WP_016189525.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1996042 1996743 . + . ID=gene-LU604_RS10455;Name=LU604_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10455;old_locus_tag=LU604_10455 NZ_CP089942.1 Protein Homology CDS 1996042 1996743 . + 0 ID=cds-WP_016189524.1;Parent=gene-LU604_RS10455;Dbxref=Genbank:WP_016189524.1;Name=WP_016189524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025353.1;locus_tag=LU604_RS10455;product=flagellar basal body L-ring protein FlgH;protein_id=WP_016189524.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1996753 1997850 . + . ID=gene-LU604_RS10460;Name=LU604_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10460;old_locus_tag=LU604_10460 NZ_CP089942.1 Protein Homology CDS 1996753 1997850 . + 0 ID=cds-WP_233480548.1;Parent=gene-LU604_RS10460;Dbxref=Genbank:WP_233480548.1;Name=WP_233480548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189523.1;locus_tag=LU604_RS10460;product=flagellar basal body P-ring protein FlgI;protein_id=WP_233480548.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1997850 1998788 . + . ID=gene-LU604_RS10465;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=LU604_RS10465;old_locus_tag=LU604_10465 NZ_CP089942.1 Protein Homology CDS 1997850 1998788 . + 0 ID=cds-WP_233480549.1;Parent=gene-LU604_RS10465;Dbxref=Genbank:WP_233480549.1;Name=WP_233480549.1;Ontology_term=GO:0001539,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668447.1;locus_tag=LU604_RS10465;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_233480549.1;transl_table=11 NZ_CP089942.1 RefSeq gene 1999030 2000682 . + . ID=gene-LU604_RS10470;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=LU604_RS10470;old_locus_tag=LU604_10470 NZ_CP089942.1 Protein Homology CDS 1999030 2000682 . + 0 ID=cds-WP_233480550.1;Parent=gene-LU604_RS10470;Dbxref=Genbank:WP_233480550.1;Name=WP_233480550.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543984.1;locus_tag=LU604_RS10470;product=flagellar hook-associated protein FlgK;protein_id=WP_233480550.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2000700 2001665 . + . ID=gene-LU604_RS10475;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=LU604_RS10475;old_locus_tag=LU604_10475 NZ_CP089942.1 Protein Homology CDS 2000700 2001665 . + 0 ID=cds-WP_233480551.1;Parent=gene-LU604_RS10475;Dbxref=Genbank:WP_233480551.1;Name=WP_233480551.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189520.1;locus_tag=LU604_RS10475;product=flagellar hook-associated protein FlgL;protein_id=WP_233480551.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2002286 2003188 . - . ID=gene-LU604_RS10480;Name=LU604_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10480;old_locus_tag=LU604_10480 NZ_CP089942.1 Protein Homology CDS 2002286 2003188 . - 0 ID=cds-WP_233480552.1;Parent=gene-LU604_RS10480;Dbxref=Genbank:WP_233480552.1;Name=WP_233480552.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012354.2;locus_tag=LU604_RS10480;product=LysR family transcriptional regulator;protein_id=WP_233480552.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2004289 2006841 . + . ID=gene-LU604_RS10485;Name=LU604_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10485;old_locus_tag=LU604_10485 NZ_CP089942.1 Protein Homology CDS 2004289 2006841 . + 0 ID=cds-WP_233480553.1;Parent=gene-LU604_RS10485;Dbxref=Genbank:WP_233480553.1;Name=WP_233480553.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012907.2;locus_tag=LU604_RS10485;product=lytic polysaccharide monooxygenase;protein_id=WP_233480553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2007126 2007458 . + . ID=gene-LU604_RS10490;Name=LU604_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10490;old_locus_tag=LU604_10490 NZ_CP089942.1 Protein Homology CDS 2007126 2007458 . + 0 ID=cds-WP_233480554.1;Parent=gene-LU604_RS10490;Dbxref=Genbank:WP_233480554.1;Name=WP_233480554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246753.1;locus_tag=LU604_RS10490;product=phage holin family protein;protein_id=WP_233480554.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2007445 2007882 . + . ID=gene-LU604_RS10495;Name=LU604_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10495;old_locus_tag=LU604_10495 NZ_CP089942.1 Protein Homology CDS 2007445 2007882 . + 0 ID=cds-WP_233480555.1;Parent=gene-LU604_RS10495;Dbxref=Genbank:WP_233480555.1;Name=WP_233480555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001167369.1;locus_tag=LU604_RS10495;product=lysozyme;protein_id=WP_233480555.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2008294 2008991 . - . ID=gene-LU604_RS10500;Name=LU604_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10500;old_locus_tag=LU604_10500 NZ_CP089942.1 Protein Homology CDS 2008742 2008991 . - 0 ID=cds-WP_233481567.1;Parent=gene-LU604_RS10500;Dbxref=Genbank:WP_233481567.1;Name=WP_233481567.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS10500;product=IS1 family transposase;protein_id=WP_233481567.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2008294 2008742 . - 2 ID=cds-WP_233481567.1;Parent=gene-LU604_RS10500;Dbxref=Genbank:WP_233481567.1;Name=WP_233481567.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS10500;product=IS1 family transposase;protein_id=WP_233481567.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2009153 2009819 . - . ID=gene-LU604_RS10505;Name=LU604_RS10505;end_range=2009819,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS10505;old_locus_tag=LU604_10505;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2009153 2009819 . - 0 ID=cds-LU604_RS10505;Parent=gene-LU604_RS10505;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=2009819,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=LU604_RS10505;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2010688 2011134 . + . ID=gene-LU604_RS10510;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS10510;old_locus_tag=LU604_10510 NZ_CP089942.1 Protein Homology CDS 2010688 2011134 . + 0 ID=cds-WP_233480557.1;Parent=gene-LU604_RS10510;Dbxref=Genbank:WP_233480557.1;Name=WP_233480557.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192470.1;locus_tag=LU604_RS10510;product=IS200/IS605 family transposase;protein_id=WP_233480557.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2011245 2012283 . + . ID=gene-LU604_RS10515;Name=LU604_RS10515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS10515;old_locus_tag=LU604_10515;pseudo=true NZ_CP089942.1 Protein Homology CDS 2011245 2012283 . + 0 ID=cds-LU604_RS10515;Parent=gene-LU604_RS10515;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS10515;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2012495 2013703 . - . ID=gene-LU604_RS10520;Name=LU604_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10520;old_locus_tag=LU604_10520 NZ_CP089942.1 Protein Homology CDS 2012495 2013703 . - 0 ID=cds-WP_233480558.1;Parent=gene-LU604_RS10520;Dbxref=Genbank:WP_233480558.1;Name=WP_233480558.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS10520;product=IS256 family transposase;protein_id=WP_233480558.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2013765 2014407 . - . ID=gene-LU604_RS10525;Name=LU604_RS10525;end_range=2014407,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS10525;old_locus_tag=LU604_10525;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2013765 2014407 . - 1 ID=cds-LU604_RS10525;Parent=gene-LU604_RS10525;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007165,GO:0016020;end_range=2014407,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789683.1;locus_tag=LU604_RS10525;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2014525 2014680 . - . ID=gene-LU604_RS10530;Name=LU604_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10530;old_locus_tag=LU604_10530 NZ_CP089942.1 GeneMarkS-2+ CDS 2014525 2014680 . - 0 ID=cds-WP_198292503.1;Parent=gene-LU604_RS10530;Dbxref=Genbank:WP_198292503.1;Name=WP_198292503.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS10530;product=hypothetical protein;protein_id=WP_198292503.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2014703 2015299 . - . ID=gene-LU604_RS10535;Name=LU604_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10535;old_locus_tag=LU604_10535 NZ_CP089942.1 Protein Homology CDS 2014703 2015299 . - 0 ID=cds-WP_233480559.1;Parent=gene-LU604_RS10535;Dbxref=Genbank:WP_233480559.1;Name=WP_233480559.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF014281.2;locus_tag=LU604_RS10535;product=Tar ligand binding domain-containing protein;protein_id=WP_233480559.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2015491 2016126 . - . ID=gene-LU604_RS10540;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=LU604_RS10540;old_locus_tag=LU604_10540 NZ_CP089942.1 Protein Homology CDS 2015491 2016126 . - 0 ID=cds-WP_016189509.1;Parent=gene-LU604_RS10540;Dbxref=Genbank:WP_016189509.1;Name=WP_016189509.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509559.1;locus_tag=LU604_RS10540;product=transcriptional regulator RcsA;protein_id=WP_016189509.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2016772 2017557 . - . ID=gene-LU604_RS10545;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=LU604_RS10545;old_locus_tag=LU604_10545 NZ_CP089942.1 Protein Homology CDS 2016772 2017557 . - 0 ID=cds-WP_233480560.1;Parent=gene-LU604_RS10545;Dbxref=Genbank:WP_233480560.1;Name=WP_233480560.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544014.1;locus_tag=LU604_RS10545;product=flagellar biosynthetic protein FliR;protein_id=WP_233480560.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2017557 2017826 . - . ID=gene-LU604_RS10550;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=LU604_RS10550;old_locus_tag=LU604_10550 NZ_CP089942.1 Protein Homology CDS 2017557 2017826 . - 0 ID=cds-WP_016189507.1;Parent=gene-LU604_RS10550;Dbxref=Genbank:WP_016189507.1;Name=WP_016189507.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliQ;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202684.1;locus_tag=LU604_RS10550;product=flagellar biosynthesis protein FliQ;protein_id=WP_016189507.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2017968 2018702 . - . ID=gene-LU604_RS10555;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=LU604_RS10555;old_locus_tag=LU604_10555 NZ_CP089942.1 Protein Homology CDS 2017968 2018702 . - 0 ID=cds-WP_016189506.1;Parent=gene-LU604_RS10555;Dbxref=Genbank:WP_016189506.1;Name=WP_016189506.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0001539;gbkey=CDS;gene=fliP;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441722.1;locus_tag=LU604_RS10555;product=flagellar type III secretion system pore protein FliP;protein_id=WP_016189506.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2018699 2019094 . - . ID=gene-LU604_RS10560;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=LU604_RS10560;old_locus_tag=LU604_10560 NZ_CP089942.1 Protein Homology CDS 2018699 2019094 . - 0 ID=cds-WP_016189505.1;Parent=gene-LU604_RS10560;Dbxref=Genbank:WP_016189505.1;Name=WP_016189505.1;Ontology_term=GO:0044781;gbkey=CDS;gene=fliO;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358289.1;locus_tag=LU604_RS10560;product=flagellar biosynthetic protein FliO;protein_id=WP_016189505.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2019096 2019500 . - . ID=gene-LU604_RS10565;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=LU604_RS10565;old_locus_tag=LU604_10565 NZ_CP089942.1 Protein Homology CDS 2019096 2019500 . - 0 ID=cds-WP_016189504.1;Parent=gene-LU604_RS10565;Dbxref=Genbank:WP_016189504.1;Name=WP_016189504.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157163.1;locus_tag=LU604_RS10565;product=flagellar motor switch protein FliN;protein_id=WP_016189504.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2019493 2020500 . - . ID=gene-LU604_RS10570;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=LU604_RS10570;old_locus_tag=LU604_10570 NZ_CP089942.1 Protein Homology CDS 2019493 2020500 . - 0 ID=cds-WP_016189503.1;Parent=gene-LU604_RS10570;Dbxref=Genbank:WP_016189503.1;Name=WP_016189503.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358287.1;locus_tag=LU604_RS10570;product=flagellar motor switch protein FliM;protein_id=WP_016189503.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2020505 2020987 . - . ID=gene-LU604_RS10575;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=LU604_RS10575;old_locus_tag=LU604_10575 NZ_CP089942.1 Protein Homology CDS 2020505 2020987 . - 0 ID=cds-WP_233480561.1;Parent=gene-LU604_RS10575;Dbxref=Genbank:WP_233480561.1;Name=WP_233480561.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008105400.1;locus_tag=LU604_RS10575;product=flagellar basal body-associated protein FliL;protein_id=WP_233480561.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2021140 2022465 . - . ID=gene-LU604_RS10580;Name=LU604_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10580;old_locus_tag=LU604_10580 NZ_CP089942.1 Protein Homology CDS 2021140 2022465 . - 0 ID=cds-WP_233480562.1;Parent=gene-LU604_RS10580;Dbxref=Genbank:WP_233480562.1;Name=WP_233480562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189501.1;locus_tag=LU604_RS10580;product=flagellar hook-length control protein FliK;protein_id=WP_233480562.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2022462 2022908 . - . ID=gene-LU604_RS10585;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=LU604_RS10585;old_locus_tag=LU604_10585 NZ_CP089942.1 Protein Homology CDS 2022462 2022908 . - 0 ID=cds-WP_233480563.1;Parent=gene-LU604_RS10585;Dbxref=Genbank:WP_233480563.1;Name=WP_233480563.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441716.1;locus_tag=LU604_RS10585;product=flagellar export protein FliJ;protein_id=WP_233480563.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2022924 2024285 . - . ID=gene-LU604_RS10590;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=LU604_RS10590;old_locus_tag=LU604_10590 NZ_CP089942.1 Protein Homology CDS 2022924 2024285 . - 0 ID=cds-WP_233480564.1;Parent=gene-LU604_RS10590;Dbxref=Genbank:WP_233480564.1;Name=WP_233480564.1;Ontology_term=GO:0001539,GO:0016887,GO:0009288;gbkey=CDS;gene=fliI;go_component=bacterial-type flagellum|0009288||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668406.1;locus_tag=LU604_RS10590;product=flagellar protein export ATPase FliI;protein_id=WP_233480564.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2024285 2024977 . - . ID=gene-LU604_RS10595;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=LU604_RS10595;old_locus_tag=LU604_10595 NZ_CP089942.1 Protein Homology CDS 2024285 2024977 . - 0 ID=cds-WP_233480565.1;Parent=gene-LU604_RS10595;Dbxref=Genbank:WP_233480565.1;Name=WP_233480565.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441714.1;locus_tag=LU604_RS10595;product=flagellar assembly protein FliH;protein_id=WP_233480565.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2024970 2025962 . - . ID=gene-LU604_RS10600;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=LU604_RS10600;old_locus_tag=LU604_10600 NZ_CP089942.1 Protein Homology CDS 2024970 2025962 . - 0 ID=cds-WP_016189497.1;Parent=gene-LU604_RS10600;Dbxref=Genbank:WP_016189497.1;Name=WP_016189497.1;Ontology_term=GO:0001539,GO:0006935,GO:0005198,GO:0009433;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum basal body%2C C ring|0009433||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854483.1;locus_tag=LU604_RS10600;product=flagellar motor switch protein FliG;protein_id=WP_016189497.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2025959 2027680 . - . ID=gene-LU604_RS10605;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=LU604_RS10605;old_locus_tag=LU604_10605 NZ_CP089942.1 Protein Homology CDS 2025959 2027680 . - 0 ID=cds-WP_233480566.1;Parent=gene-LU604_RS10605;Dbxref=Genbank:WP_233480566.1;Name=WP_233480566.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157178.1;locus_tag=LU604_RS10605;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_233480566.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2027920 2028231 . + . ID=gene-LU604_RS10610;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=LU604_RS10610;old_locus_tag=LU604_10610 NZ_CP089942.1 Protein Homology CDS 2027920 2028231 . + 0 ID=cds-WP_016189495.1;Parent=gene-LU604_RS10610;Dbxref=Genbank:WP_016189495.1;Name=WP_016189495.1;Ontology_term=GO:0001539,GO:0005198;gbkey=CDS;gene=fliE;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441711.1;locus_tag=LU604_RS10610;product=flagellar hook-basal body complex protein FliE;protein_id=WP_016189495.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2028263 2029546 . - . ID=gene-LU604_RS10615;Name=LU604_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10615;old_locus_tag=LU604_10615 NZ_CP089942.1 Protein Homology CDS 2028263 2029546 . - 0 ID=cds-WP_233481568.1;Parent=gene-LU604_RS10615;Dbxref=Genbank:WP_233481568.1;Name=WP_233481568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006119560.1;locus_tag=LU604_RS10615;product=DUF3596 domain-containing protein;protein_id=WP_233481568.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2029578 2029826 . - . ID=gene-LU604_RS10620;Name=xisR;gbkey=Gene;gene=xisR;gene_biotype=protein_coding;locus_tag=LU604_RS10620;old_locus_tag=LU604_10620 NZ_CP089942.1 Protein Homology CDS 2029578 2029826 . - 0 ID=cds-WP_233481569.1;Parent=gene-LU604_RS10620;Dbxref=Genbank:WP_233481569.1;Name=WP_233481569.1;gbkey=CDS;gene=xisR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816511.1;locus_tag=LU604_RS10620;product=excisionase family protein;protein_id=WP_233481569.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2029926 2030129 . - . ID=gene-LU604_RS10625;Name=LU604_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10625;old_locus_tag=LU604_10625 NZ_CP089942.1 GeneMarkS-2+ CDS 2029926 2030129 . - 0 ID=cds-WP_233481570.1;Parent=gene-LU604_RS10625;Dbxref=Genbank:WP_233481570.1;Name=WP_233481570.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS10625;product=hypothetical protein;protein_id=WP_233481570.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2030113 2030466 . - . ID=gene-LU604_RS10630;Name=LU604_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10630;old_locus_tag=LU604_10630 NZ_CP089942.1 GeneMarkS-2+ CDS 2030113 2030466 . - 0 ID=cds-WP_233481571.1;Parent=gene-LU604_RS10630;Dbxref=Genbank:WP_233481571.1;Name=WP_233481571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS10630;product=hypothetical protein;protein_id=WP_233481571.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2030463 2030684 . - . ID=gene-LU604_RS10635;Name=LU604_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10635;old_locus_tag=LU604_10635 NZ_CP089942.1 Protein Homology CDS 2030463 2030684 . - 0 ID=cds-WP_016191225.1;Parent=gene-LU604_RS10635;Dbxref=Genbank:WP_016191225.1;Name=WP_016191225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009637423.1;locus_tag=LU604_RS10635;product=hypothetical protein;protein_id=WP_016191225.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2030681 2030950 . - . ID=gene-LU604_RS10640;Name=LU604_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10640;old_locus_tag=LU604_10640 NZ_CP089942.1 Protein Homology CDS 2030681 2030950 . - 0 ID=cds-WP_233481572.1;Parent=gene-LU604_RS10640;Dbxref=Genbank:WP_233481572.1;Name=WP_233481572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191224.1;locus_tag=LU604_RS10640;product=DUF5405 family protein;protein_id=WP_233481572.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2031027 2031239 . - . ID=gene-LU604_RS10645;Name=LU604_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10645;old_locus_tag=LU604_10645 NZ_CP089942.1 GeneMarkS-2+ CDS 2031027 2031239 . - 0 ID=cds-WP_233481573.1;Parent=gene-LU604_RS10645;Dbxref=Genbank:WP_233481573.1;Name=WP_233481573.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS10645;product=DUF551 domain-containing protein;protein_id=WP_233481573.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2031232 2031402 . - . ID=gene-LU604_RS10650;Name=LU604_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10650;old_locus_tag=LU604_10650 NZ_CP089942.1 Protein Homology CDS 2031232 2031402 . - 0 ID=cds-WP_233481574.1;Parent=gene-LU604_RS10650;Dbxref=Genbank:WP_233481574.1;Name=WP_233481574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000208036.1;locus_tag=LU604_RS10650;product=hypothetical protein;protein_id=WP_233481574.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2031399 2031875 . - . ID=gene-LU604_RS10655;Name=LU604_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10655;old_locus_tag=LU604_10655 NZ_CP089942.1 Protein Homology CDS 2031399 2031875 . - 0 ID=cds-WP_233480242.1-2;Parent=gene-LU604_RS10655;Dbxref=Genbank:WP_233480242.1;Name=WP_233480242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681704.1;locus_tag=LU604_RS10655;product=hypothetical protein;protein_id=WP_233480242.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2031872 2032594 . - . ID=gene-LU604_RS10660;Name=LU604_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10660;old_locus_tag=LU604_10660 NZ_CP089942.1 GeneMarkS-2+ CDS 2031872 2032594 . - 0 ID=cds-WP_233480243.1-2;Parent=gene-LU604_RS10660;Dbxref=Genbank:WP_233480243.1;Name=WP_233480243.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS10660;product=hypothetical protein;protein_id=WP_233480243.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2032591 2033070 . - . ID=gene-LU604_RS10665;Name=LU604_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10665;old_locus_tag=LU604_10665 NZ_CP089942.1 Protein Homology CDS 2032591 2033070 . - 0 ID=cds-WP_233480244.1-2;Parent=gene-LU604_RS10665;Dbxref=Genbank:WP_233480244.1;Name=WP_233480244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001006818.1;locus_tag=LU604_RS10665;product=class I SAM-dependent methyltransferase;protein_id=WP_233480244.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2033067 2033291 . - . ID=gene-LU604_RS10670;Name=LU604_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10670;old_locus_tag=LU604_10670 NZ_CP089942.1 Protein Homology CDS 2033067 2033291 . - 0 ID=cds-WP_046372144.1-2;Parent=gene-LU604_RS10670;Dbxref=Genbank:WP_046372144.1;Name=WP_046372144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236813.1;locus_tag=LU604_RS10670;product=hypothetical protein;protein_id=WP_046372144.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2033284 2034039 . - . ID=gene-LU604_RS10675;Name=LU604_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10675;old_locus_tag=LU604_10675 NZ_CP089942.1 GeneMarkS-2+ CDS 2033284 2034039 . - 0 ID=cds-WP_233481575.1;Parent=gene-LU604_RS10675;Dbxref=Genbank:WP_233481575.1;Name=WP_233481575.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS10675;product=hypothetical protein;protein_id=WP_233481575.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2034036 2034617 . - . ID=gene-LU604_RS10680;Name=LU604_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10680;old_locus_tag=LU604_10680 NZ_CP089942.1 Protein Homology CDS 2034036 2034617 . - 0 ID=cds-WP_233480246.1-2;Parent=gene-LU604_RS10680;Dbxref=Genbank:WP_233480246.1;Name=WP_233480246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016530552.1;locus_tag=LU604_RS10680;product=hypothetical protein;protein_id=WP_233480246.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2034627 2034896 . - . ID=gene-LU604_RS10685;Name=LU604_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10685;old_locus_tag=LU604_10685 NZ_CP089942.1 GeneMarkS-2+ CDS 2034627 2034896 . - 0 ID=cds-WP_016191220.1;Parent=gene-LU604_RS10685;Dbxref=Genbank:WP_016191220.1;Name=WP_016191220.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS10685;product=hypothetical protein;protein_id=WP_016191220.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2034917 2035552 . - . ID=gene-LU604_RS10690;Name=LU604_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10690;old_locus_tag=LU604_10690 NZ_CP089942.1 Protein Homology CDS 2034917 2035552 . - 0 ID=cds-WP_016191219.1-2;Parent=gene-LU604_RS10690;Dbxref=Genbank:WP_016191219.1;Name=WP_016191219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000031374.1;locus_tag=LU604_RS10690;product=ERF family protein;protein_id=WP_016191219.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2035865 2035993 . - . ID=gene-LU604_RS10695;Name=LU604_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10695;old_locus_tag=LU604_10695 NZ_CP089942.1 Protein Homology CDS 2035865 2035993 . - 0 ID=cds-WP_233481576.1;Parent=gene-LU604_RS10695;Dbxref=Genbank:WP_233481576.1;Name=WP_233481576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001443641.1;locus_tag=LU604_RS10695;product=protease FtsH-inhibitory lysogeny factor CIII;protein_id=WP_233481576.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2036012 2036974 . - . ID=gene-LU604_RS10700;Name=LU604_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10700;old_locus_tag=LU604_10700 NZ_CP089942.1 Protein Homology CDS 2036012 2036974 . - 0 ID=cds-WP_233481577.1;Parent=gene-LU604_RS10700;Dbxref=Genbank:WP_233481577.1;Name=WP_233481577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020805447.1;locus_tag=LU604_RS10700;product=hypothetical protein;protein_id=WP_233481577.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2037014 2037778 . - . ID=gene-LU604_RS10705;Name=LU604_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10705;old_locus_tag=LU604_10705 NZ_CP089942.1 Protein Homology CDS 2037014 2037778 . - 0 ID=cds-WP_233478620.1;Parent=gene-LU604_RS10705;Dbxref=Genbank:WP_233478620.1;Name=WP_233478620.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303785.1;locus_tag=LU604_RS10705;product=phage antirepressor KilAC domain-containing protein;protein_id=WP_233478620.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2038101 2038397 . - . ID=gene-LU604_RS10710;Name=LU604_RS10710;end_range=2038397,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS10710;old_locus_tag=LU604_10710;partial=true;pseudo=true;start_range=.,2038101 NZ_CP089942.1 Protein Homology CDS 2038101 2038397 . - 0 ID=cds-LU604_RS10710;Parent=gene-LU604_RS10710;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2038397,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000935599.1;locus_tag=LU604_RS10710;partial=true;product=Rha family transcriptional regulator;pseudo=true;start_range=.,2038101;transl_table=11 NZ_CP089942.1 RefSeq gene 2038716 2039123 . + . ID=gene-LU604_RS10715;Name=LU604_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10715;old_locus_tag=LU604_10715 NZ_CP089942.1 Protein Homology CDS 2038716 2039123 . + 0 ID=cds-WP_233481578.1;Parent=gene-LU604_RS10715;Dbxref=Genbank:WP_233481578.1;Name=WP_233481578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189481.1;locus_tag=LU604_RS10715;product=CCDC90 family protein;protein_id=WP_233481578.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2039245 2039613 . - . ID=gene-LU604_RS10720;Name=LU604_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10720;old_locus_tag=LU604_10720 NZ_CP089942.1 GeneMarkS-2+ CDS 2039245 2039613 . - 0 ID=cds-WP_233481579.1;Parent=gene-LU604_RS10720;Dbxref=Genbank:WP_233481579.1;Name=WP_233481579.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS10720;product=hypothetical protein;protein_id=WP_233481579.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2039800 2040291 . - . ID=gene-LU604_RS10725;Name=LU604_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10725;old_locus_tag=LU604_10725 NZ_CP089942.1 GeneMarkS-2+ CDS 2039800 2040291 . - 0 ID=cds-WP_233481580.1;Parent=gene-LU604_RS10725;Dbxref=Genbank:WP_233481580.1;Name=WP_233481580.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS10725;product=hypothetical protein;protein_id=WP_233481580.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2040299 2040625 . - . ID=gene-LU604_RS10730;Name=LU604_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10730;old_locus_tag=LU604_10730 NZ_CP089942.1 Protein Homology CDS 2040299 2040625 . - 0 ID=cds-WP_233481581.1;Parent=gene-LU604_RS10730;Dbxref=Genbank:WP_233481581.1;Name=WP_233481581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088201.1;locus_tag=LU604_RS10730;product=antitermination protein;protein_id=WP_233481581.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2040983 2041156 . + . ID=gene-LU604_RS10735;Name=LU604_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10735;old_locus_tag=LU604_10735 NZ_CP089942.1 Protein Homology CDS 2040983 2041156 . + 0 ID=cds-WP_233481582.1;Parent=gene-LU604_RS10735;Dbxref=Genbank:WP_233481582.1;Name=WP_233481582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004223168.1;locus_tag=LU604_RS10735;product=hypothetical protein;protein_id=WP_233481582.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2041187 2041522 . - . ID=gene-LU604_RS10740;Name=LU604_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10740;old_locus_tag=LU604_10740 NZ_CP089942.1 Protein Homology CDS 2041187 2041522 . - 0 ID=cds-WP_233481583.1;Parent=gene-LU604_RS10740;Dbxref=Genbank:WP_233481583.1;Name=WP_233481583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749906.1;locus_tag=LU604_RS10740;product=hypothetical protein;protein_id=WP_233481583.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2041509 2041919 . - . ID=gene-LU604_RS10745;Name=LU604_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10745;old_locus_tag=LU604_10745 NZ_CP089942.1 GeneMarkS-2+ CDS 2041509 2041919 . - 0 ID=cds-WP_233481584.1;Parent=gene-LU604_RS10745;Dbxref=Genbank:WP_233481584.1;Name=WP_233481584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS10745;product=hypothetical protein;protein_id=WP_233481584.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2041941 2042660 . - . ID=gene-LU604_RS10750;Name=LU604_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10750;old_locus_tag=LU604_10750 NZ_CP089942.1 Protein Homology CDS 2041941 2042660 . - 0 ID=cds-WP_233481585.1;Parent=gene-LU604_RS10750;Dbxref=Genbank:WP_233481585.1;Name=WP_233481585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162431.1;locus_tag=LU604_RS10750;product=XRE family transcriptional regulator;protein_id=WP_233481585.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2042764 2043003 . + . ID=gene-LU604_RS10755;Name=LU604_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10755;old_locus_tag=LU604_10755 NZ_CP089942.1 Protein Homology CDS 2042764 2043003 . + 0 ID=cds-WP_233481586.1;Parent=gene-LU604_RS10755;Dbxref=Genbank:WP_233481586.1;Name=WP_233481586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509315.1;locus_tag=LU604_RS10755;product=helix-turn-helix transcriptional regulator;protein_id=WP_233481586.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2043139 2043444 . + . ID=gene-LU604_RS10760;Name=LU604_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10760;old_locus_tag=LU604_10760 NZ_CP089942.1 Protein Homology CDS 2043139 2043444 . + 0 ID=cds-WP_016191209.1;Parent=gene-LU604_RS10760;Dbxref=Genbank:WP_016191209.1;Name=WP_016191209.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010281906.1;locus_tag=LU604_RS10760;product=CII family transcriptional regulator;protein_id=WP_016191209.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2043463 2044164 . + . ID=gene-LU604_RS10765;Name=LU604_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10765;old_locus_tag=LU604_10765 NZ_CP089942.1 Protein Homology CDS 2043463 2044164 . + 0 ID=cds-WP_233481587.1;Parent=gene-LU604_RS10765;Dbxref=Genbank:WP_233481587.1;Name=WP_233481587.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191208.1;locus_tag=LU604_RS10765;product=phage antirepressor KilAC domain-containing protein;protein_id=WP_233481587.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2044161 2044886 . + . ID=gene-LU604_RS10770;Name=LU604_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10770;old_locus_tag=LU604_10770 NZ_CP089942.1 Protein Homology CDS 2044161 2044886 . + 0 ID=cds-WP_233480256.1;Parent=gene-LU604_RS10770;Dbxref=Genbank:WP_233480256.1;Name=WP_233480256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000061490.1;locus_tag=LU604_RS10770;product=helix-turn-helix domain-containing protein;protein_id=WP_233480256.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2044883 2045646 . + . ID=gene-LU604_RS10775;Name=LU604_RS10775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS10775;old_locus_tag=LU604_10775;pseudo=true NZ_CP089942.1 Protein Homology CDS 2044883 2045646 . + 0 ID=cds-LU604_RS10775;Parent=gene-LU604_RS10775;Note=frameshifted;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837634.1;locus_tag=LU604_RS10775;product=replication protein P;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2046100 2046753 . + . ID=gene-LU604_RS10780;Name=LU604_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10780;old_locus_tag=LU604_10780 NZ_CP089942.1 Protein Homology CDS 2046100 2046753 . + 0 ID=cds-WP_233481543.1-2;Parent=gene-LU604_RS10780;Dbxref=Genbank:WP_233481543.1;Name=WP_233481543.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014548.2;locus_tag=LU604_RS10780;product=BRO family protein;protein_id=WP_233481543.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2046803 2047240 . + . ID=gene-LU604_RS10785;Name=LU604_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10785;old_locus_tag=LU604_10785 NZ_CP089942.1 Protein Homology CDS 2046803 2047240 . + 0 ID=cds-WP_233481588.1;Parent=gene-LU604_RS10785;Dbxref=Genbank:WP_233481588.1;Name=WP_233481588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011410606.1;locus_tag=LU604_RS10785;product=recombination protein NinB;protein_id=WP_233481588.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2047237 2047530 . + . ID=gene-LU604_RS10790;Name=LU604_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10790;old_locus_tag=LU604_10790 NZ_CP089942.1 Protein Homology CDS 2047237 2047530 . + 0 ID=cds-WP_233481589.1;Parent=gene-LU604_RS10790;Dbxref=Genbank:WP_233481589.1;Name=WP_233481589.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024804.2;locus_tag=LU604_RS10790;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_233481589.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2047708 2048001 . + . ID=gene-LU604_RS10795;Name=LU604_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10795;old_locus_tag=LU604_10795 NZ_CP089942.1 Protein Homology CDS 2047708 2048001 . + 0 ID=cds-WP_233480809.1;Parent=gene-LU604_RS10795;Dbxref=Genbank:WP_233480809.1;Name=WP_233480809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004139422.1;locus_tag=LU604_RS10795;product=DUF1364 domain-containing protein;protein_id=WP_233480809.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2047998 2048360 . + . ID=gene-LU604_RS10800;Name=rusA;gbkey=Gene;gene=rusA;gene_biotype=protein_coding;locus_tag=LU604_RS10800;old_locus_tag=LU604_10800 NZ_CP089942.1 Protein Homology CDS 2047998 2048360 . + 0 ID=cds-WP_233478701.1;Parent=gene-LU604_RS10800;Dbxref=Genbank:WP_233478701.1;Name=WP_233478701.1;Ontology_term=GO:0006281,GO:0006310,GO:0008821;gbkey=CDS;gene=rusA;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001008185.1;locus_tag=LU604_RS10800;product=crossover junction endodeoxyribonuclease RusA;protein_id=WP_233478701.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2048357 2048752 . + . ID=gene-LU604_RS10805;Name=LU604_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10805;old_locus_tag=LU604_10805 NZ_CP089942.1 Protein Homology CDS 2048357 2048752 . + 0 ID=cds-WP_233478700.1;Parent=gene-LU604_RS10805;Dbxref=Genbank:WP_233478700.1;Name=WP_233478700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132746.1;locus_tag=LU604_RS10805;product=hypothetical protein;protein_id=WP_233478700.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2048844 2049233 . + . ID=gene-LU604_RS10810;Name=LU604_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10810;old_locus_tag=LU604_10810 NZ_CP089942.1 Protein Homology CDS 2048844 2049233 . + 0 ID=cds-WP_016191198.1;Parent=gene-LU604_RS10810;Dbxref=Genbank:WP_016191198.1;Name=WP_016191198.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215636.1;locus_tag=LU604_RS10810;product=antiterminator Q family protein;protein_id=WP_016191198.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2049412 2049561 . + . ID=gene-LU604_RS10815;Name=LU604_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10815;old_locus_tag=LU604_10815 NZ_CP089942.1 Protein Homology CDS 2049412 2049561 . + 0 ID=cds-WP_233481641.1;Parent=gene-LU604_RS10815;Dbxref=Genbank:WP_233481641.1;Name=WP_233481641.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000809168.1;locus_tag=LU604_RS10815;product=Hok/Gef family protein;protein_id=WP_233481641.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2049856 2050641 . + . ID=gene-LU604_RS10820;Name=LU604_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10820;old_locus_tag=LU604_10820 NZ_CP089942.1 Protein Homology CDS 2049856 2050641 . + 0 ID=cds-WP_233481332.1;Parent=gene-LU604_RS10820;Dbxref=Genbank:WP_233481332.1;Name=WP_233481332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750874.1;locus_tag=LU604_RS10820;product=Bro-N domain-containing protein;protein_id=WP_233481332.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2051080 2051451 . + . ID=gene-LU604_RS10825;Name=LU604_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10825;old_locus_tag=LU604_10825 NZ_CP089942.1 Protein Homology CDS 2051080 2051451 . + 0 ID=cds-WP_016191195.1;Parent=gene-LU604_RS10825;Dbxref=Genbank:WP_016191195.1;Name=WP_016191195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891426.1;locus_tag=LU604_RS10825;product=hypothetical protein;protein_id=WP_016191195.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2051448 2051750 . + . ID=gene-LU604_RS10830;Name=LU604_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10830;old_locus_tag=LU604_10830 NZ_CP089942.1 Protein Homology CDS 2051448 2051750 . + 0 ID=cds-WP_016191194.1;Parent=gene-LU604_RS10830;Dbxref=Genbank:WP_016191194.1;Name=WP_016191194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008926859.1;locus_tag=LU604_RS10830;product=hypothetical protein;protein_id=WP_016191194.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2051747 2052214 . + . ID=gene-LU604_RS10835;Name=LU604_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10835;old_locus_tag=LU604_10835 NZ_CP089942.1 Protein Homology CDS 2051747 2052214 . + 0 ID=cds-WP_016191193.1;Parent=gene-LU604_RS10835;Dbxref=Genbank:WP_016191193.1;Name=WP_016191193.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008108958.1;locus_tag=LU604_RS10835;product=glycoside hydrolase family protein;protein_id=WP_016191193.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2052249 2052554 . + . ID=gene-LU604_RS10840;Name=LU604_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10840;old_locus_tag=LU604_10840 NZ_CP089942.1 Protein Homology CDS 2052249 2052554 . + 0 ID=cds-WP_233481590.1;Parent=gene-LU604_RS10840;Dbxref=Genbank:WP_233481590.1;Name=WP_233481590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191192.1;locus_tag=LU604_RS10840;product=hypothetical protein;protein_id=WP_233481590.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2052551 2052832 . + . ID=gene-LU604_RS10845;Name=LU604_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10845;old_locus_tag=LU604_10845 NZ_CP089942.1 GeneMarkS-2+ CDS 2052551 2052832 . + 0 ID=cds-WP_016191191.1;Parent=gene-LU604_RS10845;Dbxref=Genbank:WP_016191191.1;Name=WP_016191191.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS10845;product=hypothetical protein;protein_id=WP_016191191.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2053265 2053456 . + . ID=gene-LU604_RS10850;Name=LU604_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10850;old_locus_tag=LU604_10850 NZ_CP089942.1 GeneMarkS-2+ CDS 2053265 2053456 . + 0 ID=cds-WP_016191190.1;Parent=gene-LU604_RS10850;Dbxref=Genbank:WP_016191190.1;Name=WP_016191190.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS10850;product=hypothetical protein;protein_id=WP_016191190.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2053660 2054094 . + . ID=gene-LU604_RS10855;Name=LU604_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10855;old_locus_tag=LU604_10855 NZ_CP089942.1 Protein Homology CDS 2053660 2054094 . + 0 ID=cds-WP_233481331.1;Parent=gene-LU604_RS10855;Dbxref=Genbank:WP_233481331.1;Name=WP_233481331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383023.1;locus_tag=LU604_RS10855;product=ubiquitin carboxyl-hydrolase;protein_id=WP_233481331.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2054091 2055338 . + . ID=gene-LU604_RS10860;Name=LU604_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10860;old_locus_tag=LU604_10860 NZ_CP089942.1 Protein Homology CDS 2054091 2055338 . + 0 ID=cds-WP_233481591.1;Parent=gene-LU604_RS10860;Dbxref=Genbank:WP_233481591.1;Name=WP_233481591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383022.1;locus_tag=LU604_RS10860;product=phage terminase large subunit;protein_id=WP_233481591.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2055354 2056703 . + . ID=gene-LU604_RS10865;Name=LU604_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10865;old_locus_tag=LU604_10865 NZ_CP089942.1 Protein Homology CDS 2055354 2056703 . + 0 ID=cds-WP_233481592.1;Parent=gene-LU604_RS10865;Dbxref=Genbank:WP_233481592.1;Name=WP_233481592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000130173.1;locus_tag=LU604_RS10865;product=DUF1073 domain-containing protein;protein_id=WP_233481592.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2056663 2057589 . + . ID=gene-LU604_RS10870;Name=LU604_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10870;old_locus_tag=LU604_10870 NZ_CP089942.1 Protein Homology CDS 2056663 2057589 . + 0 ID=cds-WP_233481593.1;Parent=gene-LU604_RS10870;Dbxref=Genbank:WP_233481593.1;Name=WP_233481593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136206.1;locus_tag=LU604_RS10870;product=phage minor head protein;protein_id=WP_233481593.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2057592 2058866 . + . ID=gene-LU604_RS10875;Name=LU604_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10875;old_locus_tag=LU604_10875 NZ_CP089942.1 Protein Homology CDS 2057592 2058866 . + 0 ID=cds-WP_233481594.1;Parent=gene-LU604_RS10875;Dbxref=Genbank:WP_233481594.1;Name=WP_233481594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384996.1;locus_tag=LU604_RS10875;product=hypothetical protein;protein_id=WP_233481594.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2058866 2059318 . + . ID=gene-LU604_RS10880;Name=LU604_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10880;old_locus_tag=LU604_10880 NZ_CP089942.1 Protein Homology CDS 2058866 2059318 . + 0 ID=cds-WP_233481595.1;Parent=gene-LU604_RS10880;Dbxref=Genbank:WP_233481595.1;Name=WP_233481595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092737.1;locus_tag=LU604_RS10880;product=hypothetical protein;protein_id=WP_233481595.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2059333 2060430 . + . ID=gene-LU604_RS10885;Name=LU604_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10885;old_locus_tag=LU604_10885 NZ_CP089942.1 Protein Homology CDS 2059333 2060430 . + 0 ID=cds-WP_233481596.1;Parent=gene-LU604_RS10885;Dbxref=Genbank:WP_233481596.1;Name=WP_233481596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136209.1;locus_tag=LU604_RS10885;product=DUF6260 family protein;protein_id=WP_233481596.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2060440 2060736 . + . ID=gene-LU604_RS10890;Name=LU604_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10890;old_locus_tag=LU604_10890 NZ_CP089942.1 Protein Homology CDS 2060440 2060736 . + 0 ID=cds-WP_233481597.1;Parent=gene-LU604_RS10890;Dbxref=Genbank:WP_233481597.1;Name=WP_233481597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384086.1;locus_tag=LU604_RS10890;product=hypothetical protein;protein_id=WP_233481597.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2060796 2061194 . + . ID=gene-LU604_RS10895;Name=LU604_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10895;old_locus_tag=LU604_10895 NZ_CP089942.1 Protein Homology CDS 2060796 2061194 . + 0 ID=cds-WP_233481598.1;Parent=gene-LU604_RS10895;Dbxref=Genbank:WP_233481598.1;Name=WP_233481598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001514201.1;locus_tag=LU604_RS10895;product=hypothetical protein;protein_id=WP_233481598.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2061194 2061370 . + . ID=gene-LU604_RS10900;Name=LU604_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10900;old_locus_tag=LU604_10900 NZ_CP089942.1 Protein Homology CDS 2061194 2061370 . + 0 ID=cds-WP_233481599.1;Parent=gene-LU604_RS10900;Dbxref=Genbank:WP_233481599.1;Name=WP_233481599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883997.1;locus_tag=LU604_RS10900;product=hypothetical protein;protein_id=WP_233481599.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2061370 2061720 . + . ID=gene-LU604_RS10905;Name=LU604_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10905;old_locus_tag=LU604_10905 NZ_CP089942.1 Protein Homology CDS 2061370 2061720 . + 0 ID=cds-WP_233481600.1;Parent=gene-LU604_RS10905;Dbxref=Genbank:WP_233481600.1;Name=WP_233481600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170186.1;locus_tag=LU604_RS10905;product=hypothetical protein;protein_id=WP_233481600.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2061723 2062130 . + . ID=gene-LU604_RS10910;Name=LU604_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10910;old_locus_tag=LU604_10910 NZ_CP089942.1 Protein Homology CDS 2061723 2062130 . + 0 ID=cds-WP_233481601.1;Parent=gene-LU604_RS10910;Dbxref=Genbank:WP_233481601.1;Name=WP_233481601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196540.1;locus_tag=LU604_RS10910;product=HK97 gp10 family phage protein;protein_id=WP_233481601.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2062127 2062510 . + . ID=gene-LU604_RS10915;Name=LU604_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10915;old_locus_tag=LU604_10915 NZ_CP089942.1 Protein Homology CDS 2062127 2062510 . + 0 ID=cds-WP_233481602.1;Parent=gene-LU604_RS10915;Dbxref=Genbank:WP_233481602.1;Name=WP_233481602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016065581.1;locus_tag=LU604_RS10915;product=hypothetical protein;protein_id=WP_233481602.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2062535 2063278 . + . ID=gene-LU604_RS10920;Name=LU604_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10920;old_locus_tag=LU604_10920 NZ_CP089942.1 Protein Homology CDS 2062535 2063278 . + 0 ID=cds-WP_233481603.1;Parent=gene-LU604_RS10920;Dbxref=Genbank:WP_233481603.1;Name=WP_233481603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509285.1;locus_tag=LU604_RS10920;product=Ig-like domain-containing protein;protein_id=WP_233481603.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2063330 2064001 . + . ID=gene-LU604_RS10925;Name=LU604_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10925;old_locus_tag=LU604_10925 NZ_CP089942.1 Protein Homology CDS 2063330 2064001 . + 0 ID=cds-WP_233481604.1;Parent=gene-LU604_RS10925;Dbxref=Genbank:WP_233481604.1;Name=WP_233481604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462732.1;locus_tag=LU604_RS10925;product=DUF6246 family protein;protein_id=WP_233481604.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2064052 2066706 . + . ID=gene-LU604_RS10930;Name=LU604_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10930;old_locus_tag=LU604_10930 NZ_CP089942.1 Protein Homology CDS 2064052 2066706 . + 0 ID=cds-WP_233481605.1;Parent=gene-LU604_RS10930;Dbxref=Genbank:WP_233481605.1;Name=WP_233481605.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040129.1;locus_tag=LU604_RS10930;product=tape measure protein;protein_id=WP_233481605.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2066711 2067064 . + . ID=gene-LU604_RS10935;Name=LU604_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10935;old_locus_tag=LU604_10935 NZ_CP089942.1 Protein Homology CDS 2066711 2067064 . + 0 ID=cds-WP_233481606.1;Parent=gene-LU604_RS10935;Dbxref=Genbank:WP_233481606.1;Name=WP_233481606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747799.1;locus_tag=LU604_RS10935;product=phage tail protein;protein_id=WP_233481606.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2067061 2067765 . + . ID=gene-LU604_RS10940;Name=LU604_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10940;old_locus_tag=LU604_10940 NZ_CP089942.1 Protein Homology CDS 2067061 2067765 . + 0 ID=cds-WP_233481607.1;Parent=gene-LU604_RS10940;Dbxref=Genbank:WP_233481607.1;Name=WP_233481607.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384990.1;locus_tag=LU604_RS10940;product=phage minor tail protein L;protein_id=WP_233481607.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2067762 2068490 . + . ID=gene-LU604_RS10945;Name=LU604_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10945;old_locus_tag=LU604_10945 NZ_CP089942.1 Protein Homology CDS 2067762 2068490 . + 0 ID=cds-WP_233481608.1;Parent=gene-LU604_RS10945;Dbxref=Genbank:WP_233481608.1;Name=WP_233481608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509278.1;locus_tag=LU604_RS10945;product=NlpC/P60 family protein;protein_id=WP_233481608.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2068433 2068963 . + . ID=gene-LU604_RS10950;Name=LU604_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10950;old_locus_tag=LU604_10950 NZ_CP089942.1 Protein Homology CDS 2068433 2068963 . + 0 ID=cds-WP_233481609.1;Parent=gene-LU604_RS10950;Dbxref=Genbank:WP_233481609.1;Name=WP_233481609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747796.1;locus_tag=LU604_RS10950;product=tail assembly protein;protein_id=WP_233481609.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2068981 2072058 . + . ID=gene-LU604_RS10955;Name=LU604_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10955;old_locus_tag=LU604_10955 NZ_CP089942.1 Protein Homology CDS 2068981 2072058 . + 0 ID=cds-WP_233481610.1;Parent=gene-LU604_RS10955;Dbxref=Genbank:WP_233481610.1;Name=WP_233481610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509276.1;locus_tag=LU604_RS10955;product=phage tail protein;protein_id=WP_233481610.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2072058 2072330 . + . ID=gene-LU604_RS10960;Name=LU604_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10960;old_locus_tag=LU604_10960 NZ_CP089942.1 GeneMarkS-2+ CDS 2072058 2072330 . + 0 ID=cds-WP_233481611.1;Parent=gene-LU604_RS10960;Dbxref=Genbank:WP_233481611.1;Name=WP_233481611.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS10960;product=hypothetical protein;protein_id=WP_233481611.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2072330 2073052 . + . ID=gene-LU604_RS10965;Name=LU604_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10965;old_locus_tag=LU604_10965 NZ_CP089942.1 GeneMarkS-2+ CDS 2072330 2073052 . + 0 ID=cds-WP_233481612.1;Parent=gene-LU604_RS10965;Dbxref=Genbank:WP_233481612.1;Name=WP_233481612.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS10965;product=hypothetical protein;protein_id=WP_233481612.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2073165 2073434 . + . ID=gene-LU604_RS10970;Name=LU604_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10970;old_locus_tag=LU604_10970 NZ_CP089942.1 GeneMarkS-2+ CDS 2073165 2073434 . + 0 ID=cds-WP_233481613.1;Parent=gene-LU604_RS10970;Dbxref=Genbank:WP_233481613.1;Name=WP_233481613.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS10970;product=TonB family protein;protein_id=WP_233481613.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2073474 2073761 . + . ID=gene-LU604_RS10975;Name=LU604_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10975;old_locus_tag=LU604_10975 NZ_CP089942.1 Protein Homology CDS 2073474 2073761 . + 0 ID=cds-WP_233481614.1;Parent=gene-LU604_RS10975;Dbxref=Genbank:WP_233481614.1;Name=WP_233481614.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01352.1;locus_tag=LU604_RS10975;product=TonB family protein;protein_id=WP_233481614.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2073816 2074526 . - . ID=gene-LU604_RS10980;Name=LU604_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10980;old_locus_tag=LU604_10980 NZ_CP089942.1 GeneMarkS-2+ CDS 2073816 2074526 . - 0 ID=cds-WP_233481615.1;Parent=gene-LU604_RS10980;Dbxref=Genbank:WP_233481615.1;Name=WP_233481615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS10980;product=hypothetical protein;protein_id=WP_233481615.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2074516 2074761 . - . ID=gene-LU604_RS10985;Name=LU604_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10985;old_locus_tag=LU604_10985 NZ_CP089942.1 Protein Homology CDS 2074516 2074761 . - 0 ID=cds-WP_233481616.1;Parent=gene-LU604_RS10985;Dbxref=Genbank:WP_233481616.1;Name=WP_233481616.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283829.1;locus_tag=LU604_RS10985;product=Arc family DNA-binding protein;protein_id=WP_233481616.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2074841 2074987 . + . ID=gene-LU604_RS10990;Name=LU604_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10990;old_locus_tag=LU604_10990 NZ_CP089942.1 Protein Homology CDS 2074841 2074987 . + 0 ID=cds-WP_233481617.1;Parent=gene-LU604_RS10990;Dbxref=Genbank:WP_233481617.1;Name=WP_233481617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001386205.1;locus_tag=LU604_RS10990;product=DNA-binding protein;protein_id=WP_233481617.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2075129 2076019 . + . ID=gene-LU604_RS10995;Name=LU604_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS10995;old_locus_tag=LU604_10995 NZ_CP089942.1 Protein Homology CDS 2075129 2076019 . + 0 ID=cds-WP_233481618.1;Parent=gene-LU604_RS10995;Dbxref=Genbank:WP_233481618.1;Name=WP_233481618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001084296.1;locus_tag=LU604_RS10995;product=phage antirepressor N-terminal domain-containing protein;protein_id=WP_233481618.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2076100 2076834 . + . ID=gene-LU604_RS11000;Name=LU604_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11000;old_locus_tag=LU604_11000 NZ_CP089942.1 Protein Homology CDS 2076100 2076834 . + 0 ID=cds-WP_233481619.1;Parent=gene-LU604_RS11000;Dbxref=Genbank:WP_233481619.1;Name=WP_233481619.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015873447.1;locus_tag=LU604_RS11000;product=phage antirepressor KilAC domain-containing protein;protein_id=WP_233481619.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2076909 2077853 . + . ID=gene-LU604_RS11005;Name=LU604_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11005;old_locus_tag=LU604_11005 NZ_CP089942.1 Protein Homology CDS 2076909 2077853 . + 0 ID=cds-WP_233481620.1;Parent=gene-LU604_RS11005;Dbxref=Genbank:WP_233481620.1;Name=WP_233481620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008925142.1;locus_tag=LU604_RS11005;product=hypothetical protein;protein_id=WP_233481620.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2077855 2078286 . + . ID=gene-LU604_RS11010;Name=LU604_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11010;old_locus_tag=LU604_11010 NZ_CP089942.1 Protein Homology CDS 2077855 2078286 . + 0 ID=cds-WP_233481621.1;Parent=gene-LU604_RS11010;Dbxref=Genbank:WP_233481621.1;Name=WP_233481621.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014467.2;locus_tag=LU604_RS11010;product=tail fiber assembly protein;protein_id=WP_233481621.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2078653 2079216 . - . ID=gene-LU604_RS11015;Name=LU604_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11015;old_locus_tag=LU604_11015 NZ_CP089942.1 Protein Homology CDS 2078653 2079216 . - 0 ID=cds-WP_233481622.1;Parent=gene-LU604_RS11015;Dbxref=Genbank:WP_233481622.1;Name=WP_233481622.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=LU604_RS11015;product=site-specific integrase;protein_id=WP_233481622.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2079341 2079481 . - . ID=gene-LU604_RS11020;Name=xisR;end_range=2079481,.;gbkey=Gene;gene=xisR;gene_biotype=pseudogene;locus_tag=LU604_RS11020;old_locus_tag=LU604_11020;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2079341 2079481 . - 0 ID=cds-LU604_RS11020;Parent=gene-LU604_RS11020;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2079481,.;gbkey=CDS;gene=xisR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015386533.1;locus_tag=LU604_RS11020;partial=true;product=excisionase family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2079668 2080690 . + . ID=gene-LU604_RS11025;Name=LU604_RS11025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11025;old_locus_tag=LU604_11025;pseudo=true NZ_CP089942.1 Protein Homology CDS 2079668 2080690 . + 0 ID=cds-LU604_RS11025;Parent=gene-LU604_RS11025;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS11025;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2080748 2080873 . + . ID=gene-LU604_RS11030;Name=LU604_RS11030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11030;old_locus_tag=LU604_11030;partial=true;pseudo=true;start_range=.,2080748 NZ_CP089942.1 Protein Homology CDS 2080748 2080873 . + 0 ID=cds-LU604_RS11030;Parent=gene-LU604_RS11030;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191786.1;locus_tag=LU604_RS11030;partial=true;product=tail fiber assembly protein;pseudo=true;start_range=.,2080748;transl_table=11 NZ_CP089942.1 RefSeq gene 2081002 2081226 . + . ID=gene-LU604_RS11035;Name=LU604_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11035;old_locus_tag=LU604_11035 NZ_CP089942.1 GeneMarkS-2+ CDS 2081002 2081226 . + 0 ID=cds-WP_016189493.1;Parent=gene-LU604_RS11035;Dbxref=Genbank:WP_016189493.1;Name=WP_016189493.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS11035;product=hypothetical protein;protein_id=WP_016189493.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2081594 2081962 . + . ID=gene-LU604_RS11040;Name=LU604_RS11040;end_range=2081962,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11040;old_locus_tag=LU604_11040;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2081594 2081962 . + 0 ID=cds-LU604_RS11040;Parent=gene-LU604_RS11040;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2081962,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833243.1;locus_tag=LU604_RS11040;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2082004 2082318 . - . ID=gene-LU604_RS11045;Name=LU604_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11045;old_locus_tag=LU604_11045 NZ_CP089942.1 Protein Homology CDS 2082004 2082318 . - 0 ID=cds-WP_233480567.1;Parent=gene-LU604_RS11045;Dbxref=Genbank:WP_233480567.1;Name=WP_233480567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189491.1;locus_tag=LU604_RS11045;product=hypothetical protein;protein_id=WP_233480567.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2082804 2083382 . + . ID=gene-LU604_RS11050;Name=LU604_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11050;old_locus_tag=LU604_11050 NZ_CP089942.1 Protein Homology CDS 2082804 2083382 . + 0 ID=cds-WP_016189490.1;Parent=gene-LU604_RS11050;Dbxref=Genbank:WP_016189490.1;Name=WP_016189490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014611549.1;locus_tag=LU604_RS11050;product=recombinase family protein;protein_id=WP_016189490.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2083412 2083893 . + . ID=gene-LU604_RS11055;Name=LU604_RS11055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11055;old_locus_tag=LU604_11055;pseudo=true NZ_CP089942.1 Protein Homology CDS 2083412 2083893 . + 0 ID=cds-LU604_RS11055;Parent=gene-LU604_RS11055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750982.1;locus_tag=LU604_RS11055;product=type VI secretion system tube protein Hcp;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2083921 2084520 . + . ID=gene-LU604_RS11060;Name=LU604_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11060;old_locus_tag=LU604_11060 NZ_CP089942.1 Protein Homology CDS 2083921 2084520 . + 0 ID=cds-WP_016189488.1;Parent=gene-LU604_RS11060;Dbxref=Genbank:WP_016189488.1;Name=WP_016189488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192547.1;locus_tag=LU604_RS11060;product=peptidoglycan recognition family protein;protein_id=WP_016189488.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2084514 2084945 . + . ID=gene-LU604_RS11065;Name=LU604_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11065;old_locus_tag=LU604_11065 NZ_CP089942.1 Protein Homology CDS 2084514 2084945 . + 0 ID=cds-WP_233480568.1;Parent=gene-LU604_RS11065;Dbxref=Genbank:WP_233480568.1;Name=WP_233480568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189487.1;locus_tag=LU604_RS11065;product=hypothetical protein;protein_id=WP_233480568.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2085144 2086352 . + . ID=gene-LU604_RS11070;Name=LU604_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11070;old_locus_tag=LU604_11070 NZ_CP089942.1 Protein Homology CDS 2085144 2086352 . + 0 ID=cds-WP_233480569.1;Parent=gene-LU604_RS11070;Dbxref=Genbank:WP_233480569.1;Name=WP_233480569.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS11070;product=IS256 family transposase;protein_id=WP_233480569.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2086626 2087599 . + . ID=gene-LU604_RS11075;Name=LU604_RS11075;end_range=2087599,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11075;old_locus_tag=LU604_11075;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2086626 2087599 . + 0 ID=cds-LU604_RS11075;Parent=gene-LU604_RS11075;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2087599,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612097.1;locus_tag=LU604_RS11075;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2087625 2088745 . - . ID=gene-LU604_RS11080;Name=LU604_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11080;old_locus_tag=LU604_11080 NZ_CP089942.1 Protein Homology CDS 2088487 2088745 . - 0 ID=cds-WP_233480570.1;Parent=gene-LU604_RS11080;Dbxref=Genbank:WP_233480570.1;Name=WP_233480570.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS11080;product=IS3 family transposase;protein_id=WP_233480570.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2087625 2088487 . - 2 ID=cds-WP_233480570.1;Parent=gene-LU604_RS11080;Dbxref=Genbank:WP_233480570.1;Name=WP_233480570.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS11080;product=IS3 family transposase;protein_id=WP_233480570.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2088819 2089025 . + . ID=gene-LU604_RS11085;Name=LU604_RS11085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11085;old_locus_tag=LU604_11085;partial=true;pseudo=true;start_range=.,2088819 NZ_CP089942.1 Protein Homology CDS 2088819 2089025 . + 0 ID=cds-LU604_RS11085;Parent=gene-LU604_RS11085;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=LU604_RS11085;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,2088819;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2089038 2089148 . - . ID=gene-LU604_RS11090;Name=LU604_RS11090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11090;old_locus_tag=LU604_11090;partial=true;pseudo=true;start_range=.,2089038 NZ_CP089942.1 Protein Homology CDS 2089038 2089148 . - 0 ID=cds-LU604_RS11090;Parent=gene-LU604_RS11090;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011623220.1;locus_tag=LU604_RS11090;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,2089038;transl_table=11 NZ_CP089942.1 RefSeq gene 2089588 2089893 . + . ID=gene-LU604_RS11095;Name=LU604_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11095;old_locus_tag=LU604_11095 NZ_CP089942.1 GeneMarkS-2+ CDS 2089588 2089893 . + 0 ID=cds-WP_233480571.1;Parent=gene-LU604_RS11095;Dbxref=Genbank:WP_233480571.1;Name=WP_233480571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS11095;product=hypothetical protein;protein_id=WP_233480571.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2089917 2090210 . + . ID=gene-LU604_RS11100;Name=LU604_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11100;old_locus_tag=LU604_11100 NZ_CP089942.1 GeneMarkS-2+ CDS 2089917 2090210 . + 0 ID=cds-WP_233480572.1;Parent=gene-LU604_RS11100;Dbxref=Genbank:WP_233480572.1;Name=WP_233480572.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS11100;product=hypothetical protein;protein_id=WP_233480572.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2090544 2091101 . - . ID=gene-LU604_RS11105;Name=LU604_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11105;old_locus_tag=LU604_11105 NZ_CP089942.1 Protein Homology CDS 2090544 2091101 . - 0 ID=cds-WP_233480781.1;Parent=gene-LU604_RS11105;Dbxref=Genbank:WP_233480781.1;Name=WP_233480781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212865.1;locus_tag=LU604_RS11105;product=recombinase family protein;protein_id=WP_233480781.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2091272 2094161 . + . ID=gene-LU604_RS11110;Name=LU604_RS11110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11110;old_locus_tag=LU604_11110;pseudo=true NZ_CP089942.1 Protein Homology CDS 2091272 2094161 . + 0 ID=cds-LU604_RS11110;Parent=gene-LU604_RS11110;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527814.1;locus_tag=LU604_RS11110;product=Tn3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2094429 2094857 . + . ID=gene-LU604_RS11115;Name=LU604_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11115;old_locus_tag=LU604_11115 NZ_CP089942.1 Protein Homology CDS 2094429 2094857 . + 0 ID=cds-WP_233480573.1;Parent=gene-LU604_RS11115;Dbxref=Genbank:WP_233480573.1;Name=WP_233480573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189481.1;locus_tag=LU604_RS11115;product=CCDC90 family protein;protein_id=WP_233480573.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2094979 2095233 . - . ID=gene-LU604_RS11120;Name=LU604_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11120;old_locus_tag=LU604_11120 NZ_CP089942.1 Protein Homology CDS 2094979 2095233 . - 0 ID=cds-WP_233480574.1;Parent=gene-LU604_RS11120;Dbxref=Genbank:WP_233480574.1;Name=WP_233480574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189480.1;locus_tag=LU604_RS11120;product=hypothetical protein;protein_id=WP_233480574.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2095269 2095484 . - . ID=gene-LU604_RS11125;Name=LU604_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11125;old_locus_tag=LU604_11125 NZ_CP089942.1 GeneMarkS-2+ CDS 2095269 2095484 . - 0 ID=cds-WP_200896947.1;Parent=gene-LU604_RS11125;Dbxref=Genbank:WP_200896947.1;Name=WP_200896947.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS11125;product=hypothetical protein;protein_id=WP_200896947.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2095869 2096093 . - . ID=gene-LU604_RS11130;Name=LU604_RS11130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11130;old_locus_tag=LU604_11130;partial=true;pseudo=true;start_range=.,2095869 NZ_CP089942.1 Protein Homology CDS 2095869 2096093 . - 0 ID=cds-LU604_RS11130;Parent=gene-LU604_RS11130;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU604_RS11130;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,2095869;transl_table=11 NZ_CP089942.1 RefSeq gene 2096197 2096784 . - . ID=gene-LU604_RS11135;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=LU604_RS11135;old_locus_tag=LU604_11135 NZ_CP089942.1 Protein Homology CDS 2096197 2096784 . - 0 ID=cds-WP_016189477.1;Parent=gene-LU604_RS11135;Dbxref=Genbank:WP_016189477.1;Name=WP_016189477.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802060.1;locus_tag=LU604_RS11135;product=aminoacyl-tRNA hydrolase;protein_id=WP_016189477.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2097036 2097317 . + . ID=gene-LU604_RS11140;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=LU604_RS11140;old_locus_tag=LU604_11140 NZ_CP089942.1 Protein Homology CDS 2097036 2097317 . + 0 ID=cds-WP_016189476.1;Parent=gene-LU604_RS11140;Dbxref=Genbank:WP_016189476.1;Name=WP_016189476.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007892909.1;locus_tag=LU604_RS11140;product=stress-induced protein YchH;protein_id=WP_016189476.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2097849 2098286 . - . ID=gene-LU604_RS11145;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS11145;old_locus_tag=LU604_11145 NZ_CP089942.1 Protein Homology CDS 2097849 2098286 . - 0 ID=cds-WP_233480575.1;Parent=gene-LU604_RS11145;Dbxref=Genbank:WP_233480575.1;Name=WP_233480575.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU604_RS11145;product=IS200/IS605 family transposase;protein_id=WP_233480575.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2098451 2099398 . - . ID=gene-LU604_RS11150;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=LU604_RS11150;old_locus_tag=LU604_11150 NZ_CP089942.1 Protein Homology CDS 2098451 2099398 . - 0 ID=cds-WP_016189474.1;Parent=gene-LU604_RS11150;Dbxref=Genbank:WP_016189474.1;Name=WP_016189474.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=LU604_RS11150;product=ribose-phosphate diphosphokinase;protein_id=WP_016189474.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2099528 2100433 . - . ID=gene-LU604_RS11155;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=LU604_RS11155;old_locus_tag=LU604_11155 NZ_CP089942.1 Protein Homology CDS 2099528 2100433 . - 0 ID=cds-WP_016189473.1;Parent=gene-LU604_RS11155;Dbxref=Genbank:WP_016189473.1;Name=WP_016189473.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201848.1;locus_tag=LU604_RS11155;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_016189473.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2100430 2101053 . - . ID=gene-LU604_RS11160;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=LU604_RS11160;old_locus_tag=LU604_11160 NZ_CP089942.1 Protein Homology CDS 2100430 2101053 . - 0 ID=cds-WP_016189472.1;Parent=gene-LU604_RS11160;Dbxref=Genbank:WP_016189472.1;Name=WP_016189472.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802066.1;locus_tag=LU604_RS11160;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_016189472.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2101280 2102536 . + . ID=gene-LU604_RS11165;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=LU604_RS11165;old_locus_tag=LU604_11165 NZ_CP089942.1 Protein Homology CDS 2101280 2102536 . + 0 ID=cds-WP_233480576.1;Parent=gene-LU604_RS11165;Dbxref=Genbank:WP_233480576.1;Name=WP_233480576.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309742.1;locus_tag=LU604_RS11165;product=glutamyl-tRNA reductase;protein_id=WP_233480576.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2102574 2103656 . + . ID=gene-LU604_RS11170;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=LU604_RS11170;old_locus_tag=LU604_11170 NZ_CP089942.1 Protein Homology CDS 2102574 2103656 . + 0 ID=cds-WP_016189470.1;Parent=gene-LU604_RS11170;Dbxref=Genbank:WP_016189470.1;Name=WP_016189470.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441609.1;locus_tag=LU604_RS11170;product=peptide chain release factor 1;protein_id=WP_016189470.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2103656 2104486 . + . ID=gene-LU604_RS11175;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=LU604_RS11175;old_locus_tag=LU604_11175 NZ_CP089942.1 Protein Homology CDS 2103656 2104486 . + 0 ID=cds-WP_016189469.1;Parent=gene-LU604_RS11175;Dbxref=Genbank:WP_016189469.1;Name=WP_016189469.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172541.1;locus_tag=LU604_RS11175;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_016189469.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2104742 2105551 . + . ID=gene-LU604_RS11180;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=LU604_RS11180;old_locus_tag=LU604_11180 NZ_CP089942.1 Protein Homology CDS 2104742 2105551 . + 0 ID=cds-WP_040465265.1;Parent=gene-LU604_RS11180;Dbxref=Genbank:WP_040465265.1;Name=WP_040465265.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003850839.1;locus_tag=LU604_RS11180;product=invasion regulator SirB1;protein_id=WP_040465265.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2105567 2106421 . + . ID=gene-LU604_RS11185;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=LU604_RS11185;old_locus_tag=LU604_11185 NZ_CP089942.1 Protein Homology CDS 2105567 2106421 . + 0 ID=cds-WP_233480577.1;Parent=gene-LU604_RS11185;Dbxref=Genbank:WP_233480577.1;Name=WP_233480577.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012848262.1;locus_tag=LU604_RS11185;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_233480577.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2106473 2106955 . + . ID=gene-LU604_RS11190;Name=LU604_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11190;old_locus_tag=LU604_11190 NZ_CP089942.1 Protein Homology CDS 2106473 2106955 . + 0 ID=cds-WP_233480578.1;Parent=gene-LU604_RS11190;Dbxref=Genbank:WP_233480578.1;Name=WP_233480578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544151.1;locus_tag=LU604_RS11190;product=META domain-containing protein;protein_id=WP_233480578.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2106945 2108042 . - . ID=gene-LU604_RS11195;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=LU604_RS11195;old_locus_tag=LU604_11195 NZ_CP089942.1 Protein Homology CDS 2106945 2108042 . - 0 ID=cds-WP_016189465.1;Parent=gene-LU604_RS11195;Dbxref=Genbank:WP_016189465.1;Name=WP_016189465.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157319.1;locus_tag=LU604_RS11195;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_016189465.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2108595 2109275 . + . ID=gene-LU604_RS11200;Name=LU604_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11200;old_locus_tag=LU604_11200 NZ_CP089942.1 Protein Homology CDS 2108595 2109275 . + 0 ID=cds-WP_016189463.1;Parent=gene-LU604_RS11200;Dbxref=Genbank:WP_016189463.1;Name=WP_016189463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157326.1;locus_tag=LU604_RS11200;product=gamma-glutamylcyclotransferase;protein_id=WP_016189463.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2109284 2110702 . - . ID=gene-LU604_RS11205;Name=LU604_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11205;old_locus_tag=LU604_11205 NZ_CP089942.1 Protein Homology CDS 2109284 2110702 . - 0 ID=cds-WP_233480579.1;Parent=gene-LU604_RS11205;Dbxref=Genbank:WP_233480579.1;Name=WP_233480579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189462.1;locus_tag=LU604_RS11205;product=serine/threonine-protein kinase;protein_id=WP_233480579.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2110752 2111699 . - . ID=gene-LU604_RS11210;Name=LU604_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11210;old_locus_tag=LU604_11210 NZ_CP089942.1 Protein Homology CDS 2110752 2111699 . - 0 ID=cds-WP_233480580.1;Parent=gene-LU604_RS11210;Dbxref=Genbank:WP_233480580.1;Name=WP_233480580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010245838.1;locus_tag=LU604_RS11210;product=hypothetical protein;protein_id=WP_233480580.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2111714 2112490 . - . ID=gene-LU604_RS11215;Name=LU604_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11215;old_locus_tag=LU604_11215 NZ_CP089942.1 Protein Homology CDS 2111714 2112490 . - 0 ID=cds-WP_016189460.1;Parent=gene-LU604_RS11215;Dbxref=Genbank:WP_016189460.1;Name=WP_016189460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357631.1;locus_tag=LU604_RS11215;product=serine/threonine-protein phosphatase;protein_id=WP_016189460.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2112487 2113650 . - . ID=gene-LU604_RS11220;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=LU604_RS11220;old_locus_tag=LU604_11220 NZ_CP089942.1 Protein Homology CDS 2112487 2113650 . - 0 ID=cds-WP_233480581.1;Parent=gene-LU604_RS11220;Dbxref=Genbank:WP_233480581.1;Name=WP_233480581.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tagH;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189459.1;locus_tag=LU604_RS11220;product=type VI secretion system-associated FHA domain protein TagH;protein_id=WP_233480581.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2113692 2114390 . - . ID=gene-LU604_RS11225;Name=tagF;gbkey=Gene;gene=tagF;gene_biotype=protein_coding;locus_tag=LU604_RS11225;old_locus_tag=LU604_11225 NZ_CP089942.1 Protein Homology CDS 2113692 2114390 . - 0 ID=cds-WP_233480582.1;Parent=gene-LU604_RS11225;Dbxref=Genbank:WP_233480582.1;Name=WP_233480582.1;gbkey=CDS;gene=tagF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668253.1;locus_tag=LU604_RS11225;product=type VI secretion system-associated protein TagF;protein_id=WP_233480582.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2114393 2116507 . - . ID=gene-LU604_RS11230;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=LU604_RS11230;old_locus_tag=LU604_11230 NZ_CP089942.1 Protein Homology CDS 2114393 2116507 . - 0 ID=cds-WP_233480583.1;Parent=gene-LU604_RS11230;Dbxref=Genbank:WP_233480583.1;Name=WP_233480583.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssM;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189457.1;locus_tag=LU604_RS11230;product=type VI secretion system membrane subunit TssM;protein_id=WP_233480583.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2116507 2117724 . - . ID=gene-LU604_RS11235;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=LU604_RS11235;old_locus_tag=LU604_11235 NZ_CP089942.1 Protein Homology CDS 2116507 2117724 . - 0 ID=cds-WP_233480584.1;Parent=gene-LU604_RS11235;Dbxref=Genbank:WP_233480584.1;Name=WP_233480584.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189456.1;locus_tag=LU604_RS11235;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_233480584.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2117816 2118325 . - . ID=gene-LU604_RS11240;Name=LU604_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11240;old_locus_tag=LU604_11240 NZ_CP089942.1 Protein Homology CDS 2117816 2118325 . - 0 ID=cds-WP_152664166.1;Parent=gene-LU604_RS11240;Dbxref=Genbank:WP_152664166.1;Name=WP_152664166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201865.1;locus_tag=LU604_RS11240;product=SH3 domain-containing protein;protein_id=WP_152664166.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2118478 2118741 . + . ID=gene-LU604_RS11245;Name=LU604_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11245;old_locus_tag=LU604_11245 NZ_CP089942.1 GeneMarkS-2+ CDS 2118478 2118741 . + 0 ID=cds-WP_016189454.1;Parent=gene-LU604_RS11245;Dbxref=Genbank:WP_016189454.1;Name=WP_016189454.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS11245;product=hypothetical protein;protein_id=WP_016189454.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2119485 2119817 . + . ID=gene-LU604_RS11250;Name=LU604_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11250;old_locus_tag=LU604_11250 NZ_CP089942.1 GeneMarkS-2+ CDS 2119485 2119817 . + 0 ID=cds-WP_087949650.1;Parent=gene-LU604_RS11250;Dbxref=Genbank:WP_087949650.1;Name=WP_087949650.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS11250;product=hypothetical protein;protein_id=WP_087949650.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2119706 2120659 . + . ID=gene-LU604_RS11255;Name=LU604_RS11255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11255;old_locus_tag=LU604_11255;pseudo=true NZ_CP089942.1 Protein Homology CDS 2119706 2120659 . + 0 ID=cds-LU604_RS11255;Parent=gene-LU604_RS11255;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023351.2;locus_tag=LU604_RS11255;product=inverse autotransporter beta domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2121280 2122487 . + . ID=gene-LU604_RS11260;Name=LU604_RS11260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11260;old_locus_tag=LU604_11260;pseudo=true NZ_CP089942.1 Protein Homology CDS 2121280 2122487 . + 0 ID=cds-LU604_RS11260;Parent=gene-LU604_RS11260;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS11260;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2122616 2123636 . + . ID=gene-LU604_RS11265;Name=LU604_RS11265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11265;old_locus_tag=LU604_11265;pseudo=true NZ_CP089942.1 Protein Homology CDS 2122616 2123636 . + 0 ID=cds-LU604_RS11265;Parent=gene-LU604_RS11265;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS11265;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2123762 2124589 . - . ID=gene-LU604_RS11270;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=LU604_RS11270;old_locus_tag=LU604_11270 NZ_CP089942.1 Protein Homology CDS 2123762 2124589 . - 0 ID=cds-WP_233480585.1;Parent=gene-LU604_RS11270;Dbxref=Genbank:WP_233480585.1;Name=WP_233480585.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226426.1;locus_tag=LU604_RS11270;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_233480585.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2125199 2125534 . + . ID=gene-LU604_RS11275;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=LU604_RS11275;old_locus_tag=LU604_11275 NZ_CP089942.1 Protein Homology CDS 2125199 2125534 . + 0 ID=cds-WP_233480586.1;Parent=gene-LU604_RS11275;Dbxref=Genbank:WP_233480586.1;Name=WP_233480586.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668237.1;locus_tag=LU604_RS11275;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_233480586.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2125753 2126125 . - . ID=gene-LU604_RS11280;Name=LU604_RS11280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11280;old_locus_tag=LU604_11280;pseudo=true NZ_CP089942.1 Protein Homology CDS 2125753 2126125 . - 0 ID=cds-LU604_RS11280;Parent=gene-LU604_RS11280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010670020.1;locus_tag=LU604_RS11280;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2126311 2127474 . - . ID=gene-LU604_RS11285;Name=LU604_RS11285;end_range=2127474,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11285;old_locus_tag=LU604_11285;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2126311 2127474 . - 0 ID=cds-LU604_RS11285;Parent=gene-LU604_RS11285;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004096,GO:0020037;end_range=2127474,.;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964746.1;locus_tag=LU604_RS11285;partial=true;product=catalase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2127653 2129050 . - . ID=gene-LU604_RS11290;Name=LU604_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11290;old_locus_tag=LU604_11290 NZ_CP089942.1 Protein Homology CDS 2127653 2129050 . - 0 ID=cds-WP_016189446.1;Parent=gene-LU604_RS11290;Dbxref=Genbank:WP_016189446.1;Name=WP_016189446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157362.1;locus_tag=LU604_RS11290;product=L-cystine transporter;protein_id=WP_016189446.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2129212 2129802 . - . ID=gene-LU604_RS11295;Name=LU604_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11295;old_locus_tag=LU604_11295 NZ_CP089942.1 Protein Homology CDS 2129212 2129802 . - 0 ID=cds-WP_233480587.1;Parent=gene-LU604_RS11295;Dbxref=Genbank:WP_233480587.1;Name=WP_233480587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189445.1;locus_tag=LU604_RS11295;product=metal-dependent hydrolase;protein_id=WP_233480587.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2129943 2130580 . - . ID=gene-LU604_RS11300;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=pseudogene;locus_tag=LU604_RS11300;old_locus_tag=LU604_11300;pseudo=true NZ_CP089942.1 Protein Homology CDS 2129943 2130580 . - 0 ID=cds-LU604_RS11300;Parent=gene-LU604_RS11300;Note=frameshifted;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201897.1;locus_tag=LU604_RS11300;product=hexitol phosphatase HxpB;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2130744 2131283 . + . ID=gene-LU604_RS11305;Name=LU604_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11305;old_locus_tag=LU604_11305 NZ_CP089942.1 Protein Homology CDS 2130744 2131283 . + 0 ID=cds-WP_016189443.1;Parent=gene-LU604_RS11305;Dbxref=Genbank:WP_016189443.1;Name=WP_016189443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441575.1;locus_tag=LU604_RS11305;product=YniB family protein;protein_id=WP_016189443.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2132126 2133113 . + . ID=gene-LU604_RS11310;Name=LU604_RS11310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11310;old_locus_tag=LU604_11310;pseudo=true NZ_CP089942.1 Protein Homology CDS 2132126 2133113 . + 0 ID=cds-LU604_RS11310;Parent=gene-LU604_RS11310;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=LU604_RS11310;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2133316 2134071 . + . ID=gene-LU604_RS11315;Name=LU604_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11315;old_locus_tag=LU604_11315 NZ_CP089942.1 Protein Homology CDS 2133316 2134071 . + 0 ID=cds-WP_016189439.1;Parent=gene-LU604_RS11315;Dbxref=Genbank:WP_016189439.1;Name=WP_016189439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357679.1;locus_tag=LU604_RS11315;product=DUF481 domain-containing protein;protein_id=WP_016189439.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2134388 2135156 . + . ID=gene-LU604_RS11320;Name=LU604_RS11320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11320;old_locus_tag=LU604_11320;pseudo=true NZ_CP089942.1 Protein Homology CDS 2134388 2135156 . + 0 ID=cds-LU604_RS11320;Parent=gene-LU604_RS11320;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS11320;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2136096 2138024 . + . ID=gene-LU604_RS11325;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=LU604_RS11325;old_locus_tag=LU604_11325 NZ_CP089942.1 Protein Homology CDS 2136096 2138024 . + 0 ID=cds-WP_233480588.1;Parent=gene-LU604_RS11325;Dbxref=Genbank:WP_233480588.1;Name=WP_233480588.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=LU604_RS11325;product=threonine--tRNA ligase;protein_id=WP_233480588.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2138028 2138579 . + . ID=gene-LU604_RS11330;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=LU604_RS11330;old_locus_tag=LU604_11330 NZ_CP089942.1 Protein Homology CDS 2138028 2138579 . + 0 ID=cds-WP_071598845.1;Parent=gene-LU604_RS11330;Dbxref=Genbank:WP_071598845.1;Name=WP_071598845.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=LU604_RS11330;product=translation initiation factor IF-3;protein_id=WP_071598845.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2138676 2138873 . + . ID=gene-LU604_RS11335;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=LU604_RS11335;old_locus_tag=LU604_11335 NZ_CP089942.1 Protein Homology CDS 2138676 2138873 . + 0 ID=cds-WP_006118955.1;Parent=gene-LU604_RS11335;Dbxref=Genbank:WP_006118955.1;Name=WP_006118955.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=LU604_RS11335;product=50S ribosomal protein L35;protein_id=WP_006118955.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2138912 2139268 . + . ID=gene-LU604_RS11340;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=LU604_RS11340;old_locus_tag=LU604_11340 NZ_CP089942.1 Protein Homology CDS 2138912 2139268 . + 0 ID=cds-WP_016169860.1;Parent=gene-LU604_RS11340;Dbxref=Genbank:WP_016169860.1;Name=WP_016169860.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=LU604_RS11340;product=50S ribosomal protein L20;protein_id=WP_016169860.1;transl_table=11 NZ_CP089942.1 cmsearch sequence_feature 2139391 2139514 . + . ID=id-NZ_CP089942.1:2139391..2139514;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP089942.1 RefSeq gene 2139400 2139441 . + . ID=gene-LU604_RS11345;Name=LU604_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11345;old_locus_tag=LU604_11345 NZ_CP089942.1 Protein Homology CDS 2139400 2139441 . + 0 ID=cds-WP_198292508.1;Parent=gene-LU604_RS11345;Dbxref=Genbank:WP_198292508.1;Name=WP_198292508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=LU604_RS11345;product=hypothetical protein;protein_id=WP_198292508.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2139598 2140581 . + . ID=gene-LU604_RS11350;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=LU604_RS11350;old_locus_tag=LU604_11350 NZ_CP089942.1 Protein Homology CDS 2139598 2140581 . + 0 ID=cds-WP_233481623.1;Parent=gene-LU604_RS11350;Dbxref=Genbank:WP_233481623.1;Name=WP_233481623.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=LU604_RS11350;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_233481623.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2140597 2142984 . + . ID=gene-LU604_RS11355;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=LU604_RS11355;old_locus_tag=LU604_11355 NZ_CP089942.1 Protein Homology CDS 2140597 2142984 . + 0 ID=cds-WP_233480590.1;Parent=gene-LU604_RS11355;Dbxref=Genbank:WP_233480590.1;Name=WP_233480590.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310447.1;locus_tag=LU604_RS11355;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_233480590.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2142989 2143288 . + . ID=gene-LU604_RS11360;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=LU604_RS11360;old_locus_tag=LU604_11360 NZ_CP089942.1 Protein Homology CDS 2142989 2143288 . + 0 ID=cds-WP_016169857.1;Parent=gene-LU604_RS11360;Dbxref=Genbank:WP_016169857.1;Name=WP_016169857.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=LU604_RS11360;product=integration host factor subunit alpha;protein_id=WP_016169857.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2143424 2144412 . - . ID=gene-LU604_RS11365;Name=LU604_RS11365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11365;old_locus_tag=LU604_11365;pseudo=true NZ_CP089942.1 Protein Homology CDS 2143424 2144412 . - 0 ID=cds-LU604_RS11365;Parent=gene-LU604_RS11365;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016153650.1;locus_tag=LU604_RS11365;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2144503 2144790 . - . ID=gene-LU604_RS11370;Name=LU604_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11370;old_locus_tag=LU604_11370 NZ_CP089942.1 Protein Homology CDS 2144503 2144790 . - 0 ID=cds-WP_016169856.1;Parent=gene-LU604_RS11370;Dbxref=Genbank:WP_016169856.1;Name=WP_016169856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000020919.1;locus_tag=LU604_RS11370;product=helix-turn-helix transcriptional regulator;protein_id=WP_016169856.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2144907 2145148 . + . ID=gene-LU604_RS11375;Name=LU604_RS11375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11375;old_locus_tag=LU604_11375;pseudo=true NZ_CP089942.1 Protein Homology CDS 2144907 2145148 . + 0 ID=cds-LU604_RS11375;Parent=gene-LU604_RS11375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082439.1;locus_tag=LU604_RS11375;product=Cox family DNA-binding protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2145355 2145624 . + . ID=gene-LU604_RS11380;Name=LU604_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11380;old_locus_tag=LU604_11380 NZ_CP089942.1 Protein Homology CDS 2145355 2145624 . + 0 ID=cds-WP_016169854.1;Parent=gene-LU604_RS11380;Dbxref=Genbank:WP_016169854.1;Name=WP_016169854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000951081.1;locus_tag=LU604_RS11380;product=DUF2724 domain-containing protein;protein_id=WP_016169854.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2145571 2146262 . - . ID=gene-LU604_RS11385;Name=LU604_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11385;old_locus_tag=LU604_11385 NZ_CP089942.1 Protein Homology CDS 2146004 2146262 . - 0 ID=cds-WP_233481624.1;Parent=gene-LU604_RS11385;Dbxref=Genbank:WP_233481624.1;Name=WP_233481624.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU604_RS11385;product=IS1 family transposase;protein_id=WP_233481624.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2145571 2146004 . - 2 ID=cds-WP_233481624.1;Parent=gene-LU604_RS11385;Dbxref=Genbank:WP_233481624.1;Name=WP_233481624.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU604_RS11385;product=IS1 family transposase;protein_id=WP_233481624.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2146886 2147404 . - . ID=gene-LU604_RS11390;Name=LU604_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11390;old_locus_tag=LU604_11390 NZ_CP089942.1 Protein Homology CDS 2146886 2147404 . - 0 ID=cds-WP_233480592.1;Parent=gene-LU604_RS11390;Dbxref=Genbank:WP_233480592.1;Name=WP_233480592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169851.1;locus_tag=LU604_RS11390;product=hypothetical protein;protein_id=WP_233480592.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2148158 2148703 . + . ID=gene-LU604_RS11395;Name=LU604_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11395;old_locus_tag=LU604_11395 NZ_CP089942.1 Protein Homology CDS 2148158 2148703 . + 0 ID=cds-WP_016169850.1;Parent=gene-LU604_RS11395;Dbxref=Genbank:WP_016169850.1;Name=WP_016169850.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003853255.1;locus_tag=LU604_RS11395;product=glutathione peroxidase;protein_id=WP_016169850.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2148804 2149178 . + . ID=gene-LU604_RS11400;Name=LU604_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11400;old_locus_tag=LU604_11400 NZ_CP089942.1 GeneMarkS-2+ CDS 2148804 2149178 . + 0 ID=cds-WP_152664165.1;Parent=gene-LU604_RS11400;Dbxref=Genbank:WP_152664165.1;Name=WP_152664165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS11400;product=hypothetical protein;protein_id=WP_152664165.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2149402 2149860 . + . ID=gene-LU604_RS11405;Name=LU604_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11405;old_locus_tag=LU604_11405 NZ_CP089942.1 Protein Homology CDS 2149402 2149860 . + 0 ID=cds-WP_233480594.1;Parent=gene-LU604_RS11405;Dbxref=Genbank:WP_233480594.1;Name=WP_233480594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169685.1;locus_tag=LU604_RS11405;product=NlpC/P60 family protein;protein_id=WP_233480594.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2150392 2151135 . + . ID=gene-LU604_RS11410;Name=LU604_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11410;old_locus_tag=LU604_11410 NZ_CP089942.1 Protein Homology CDS 2150392 2151135 . + 0 ID=cds-WP_016169847.1;Parent=gene-LU604_RS11410;Dbxref=Genbank:WP_016169847.1;Name=WP_016169847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201913.1;locus_tag=LU604_RS11410;product=EAL domain-containing protein;protein_id=WP_016169847.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2151227 2152666 . + . ID=gene-LU604_RS11415;Name=LU604_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11415;old_locus_tag=LU604_11415 NZ_CP089942.1 Protein Homology CDS 2151227 2152666 . + 0 ID=cds-WP_016169846.1;Parent=gene-LU604_RS11415;Dbxref=Genbank:WP_016169846.1;Name=WP_016169846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157390.1;locus_tag=LU604_RS11415;product=YdiU family protein;protein_id=WP_016169846.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2152698 2153084 . + . ID=gene-LU604_RS11420;Name=LU604_RS11420;end_range=2153084,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11420;old_locus_tag=LU604_11420;partial=true;pseudo=true;start_range=.,2152698 NZ_CP089942.1 Protein Homology CDS 2152698 2153084 . + 0 ID=cds-LU604_RS11420;Parent=gene-LU604_RS11420;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2153084,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594674.1;locus_tag=LU604_RS11420;partial=true;product=diguanylate cyclase;pseudo=true;start_range=.,2152698;transl_table=11 NZ_CP089942.1 RefSeq gene 2153189 2154970 . - . ID=gene-LU604_RS11425;Name=LU604_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11425;old_locus_tag=LU604_11425 NZ_CP089942.1 Protein Homology CDS 2153189 2154970 . - 0 ID=cds-WP_233480595.1;Parent=gene-LU604_RS11425;Dbxref=Genbank:WP_233480595.1;Name=WP_233480595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118233.1;locus_tag=LU604_RS11425;product=sensor domain-containing phosphodiesterase;protein_id=WP_233480595.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2155311 2156708 . + . ID=gene-LU604_RS11430;Name=LU604_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11430;old_locus_tag=LU604_11430 NZ_CP089942.1 Protein Homology CDS 2155311 2156708 . + 0 ID=cds-WP_233480596.1;Parent=gene-LU604_RS11430;Dbxref=Genbank:WP_233480596.1;Name=WP_233480596.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802789.1;locus_tag=LU604_RS11430;product=methyl-accepting chemotaxis protein;protein_id=WP_233480596.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2157516 2158721 . + . ID=gene-LU604_RS11435;Name=LU604_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11435;old_locus_tag=LU604_11435 NZ_CP089942.1 Protein Homology CDS 2157516 2158721 . + 0 ID=cds-WP_016169842.1;Parent=gene-LU604_RS11435;Dbxref=Genbank:WP_016169842.1;Name=WP_016169842.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012815698.1;locus_tag=LU604_RS11435;product=MFS transporter;protein_id=WP_016169842.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2158945 2160489 . + . ID=gene-LU604_RS11440;Name=LU604_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11440;old_locus_tag=LU604_11440 NZ_CP089942.1 Protein Homology CDS 2158945 2160489 . + 0 ID=cds-WP_016169841.1;Parent=gene-LU604_RS11440;Dbxref=Genbank:WP_016169841.1;Name=WP_016169841.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013027297.1;locus_tag=LU604_RS11440;product=methyl-accepting chemotaxis protein;protein_id=WP_016169841.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2160553 2161599 . - . ID=gene-LU604_RS11445;Name=LU604_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11445;old_locus_tag=LU604_11445 NZ_CP089942.1 Protein Homology CDS 2160553 2161599 . - 0 ID=cds-WP_233480597.1;Parent=gene-LU604_RS11445;Dbxref=Genbank:WP_233480597.1;Name=WP_233480597.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169840.1;locus_tag=LU604_RS11445;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_233480597.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2161752 2162579 . - . ID=gene-LU604_RS11450;Name=LU604_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11450;old_locus_tag=LU604_11450 NZ_CP089942.1 Protein Homology CDS 2161752 2162579 . - 0 ID=cds-WP_016169839.1;Parent=gene-LU604_RS11450;Dbxref=Genbank:WP_016169839.1;Name=WP_016169839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118966.1;locus_tag=LU604_RS11450;product=kinase/pyrophosphorylase;protein_id=WP_016169839.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2162673 2163370 . - . ID=gene-LU604_RS11455;Name=LU604_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11455;old_locus_tag=LU604_11455 NZ_CP089942.1 Protein Homology CDS 2163121 2163370 . - 0 ID=cds-WP_233480598.1;Parent=gene-LU604_RS11455;Dbxref=Genbank:WP_233480598.1;Name=WP_233480598.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS11455;product=IS1 family transposase;protein_id=WP_233480598.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2162673 2163121 . - 2 ID=cds-WP_233480598.1;Parent=gene-LU604_RS11455;Dbxref=Genbank:WP_233480598.1;Name=WP_233480598.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS11455;product=IS1 family transposase;protein_id=WP_233480598.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2163788 2166172 . + . ID=gene-LU604_RS11460;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=LU604_RS11460;old_locus_tag=LU604_11460 NZ_CP089942.1 Protein Homology CDS 2163788 2166172 . + 0 ID=cds-WP_233481625.1;Parent=gene-LU604_RS11460;Dbxref=Genbank:WP_233481625.1;Name=WP_233481625.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169838.1;locus_tag=LU604_RS11460;product=phosphoenolpyruvate synthase;protein_id=WP_233481625.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2166227 2166335 . - . ID=gene-LU604_RS11465;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=LU604_RS11465;old_locus_tag=LU604_11465 NZ_CP089942.1 cmsearch antisense_RNA 2166227 2166335 . - . ID=rna-LU604_RS11465;Parent=gene-LU604_RS11465;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS11465;product=antisense sRNA RprA NZ_CP089942.1 cmsearch exon 2166227 2166335 . - . ID=exon-LU604_RS11465-1;Parent=rna-LU604_RS11465;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS11465;product=antisense sRNA RprA NZ_CP089942.1 RefSeq gene 2166586 2167701 . - . ID=gene-LU604_RS11470;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=LU604_RS11470;old_locus_tag=LU604_11470 NZ_CP089942.1 Protein Homology CDS 2166586 2167701 . - 0 ID=cds-WP_233480600.1;Parent=gene-LU604_RS11470;Dbxref=Genbank:WP_233480600.1;Name=WP_233480600.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169837.1;locus_tag=LU604_RS11470;product=AI-2E family transporter YdiK;protein_id=WP_233480600.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2167922 2170981 . + . ID=gene-LU604_RS11475;Name=LU604_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11475;old_locus_tag=LU604_11475 NZ_CP089942.1 Protein Homology CDS 2167922 2170981 . + 0 ID=cds-WP_233480782.1;Parent=gene-LU604_RS11475;Dbxref=Genbank:WP_233480782.1;Name=WP_233480782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007892713.1;locus_tag=LU604_RS11475;product=FAD-binding and (Fe-S)-binding domain-containing protein;protein_id=WP_233480782.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2170981 2171418 . + . ID=gene-LU604_RS11480;Name=LU604_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11480;old_locus_tag=LU604_11480 NZ_CP089942.1 Protein Homology CDS 2170981 2171418 . + 0 ID=cds-WP_016169835.1;Parent=gene-LU604_RS11480;Dbxref=Genbank:WP_016169835.1;Name=WP_016169835.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201920.1;locus_tag=LU604_RS11480;product=hotdog fold thioesterase;protein_id=WP_016169835.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2171434 2171838 . - . ID=gene-LU604_RS11485;Name=LU604_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11485;old_locus_tag=LU604_11485 NZ_CP089942.1 Protein Homology CDS 2171434 2171838 . - 0 ID=cds-WP_233480601.1;Parent=gene-LU604_RS11485;Dbxref=Genbank:WP_233480601.1;Name=WP_233480601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668211.1;locus_tag=LU604_RS11485;product=hypothetical protein;protein_id=WP_233480601.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2172230 2172604 . + . ID=gene-LU604_RS11490;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=LU604_RS11490;old_locus_tag=LU604_11490 NZ_CP089942.1 Protein Homology CDS 2172230 2172604 . + 0 ID=cds-WP_233480602.1;Parent=gene-LU604_RS11490;Dbxref=Genbank:WP_233480602.1;Name=WP_233480602.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025593.1;locus_tag=LU604_RS11490;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_233480602.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2172610 2174103 . + . ID=gene-LU604_RS11495;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=LU604_RS11495;old_locus_tag=LU604_11495 NZ_CP089942.1 Protein Homology CDS 2172610 2174103 . + 0 ID=cds-WP_233480603.1;Parent=gene-LU604_RS11495;Dbxref=Genbank:WP_233480603.1;Name=WP_233480603.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227425.1;locus_tag=LU604_RS11495;product=Fe-S cluster assembly protein SufB;protein_id=WP_233480603.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2174160 2174906 . + . ID=gene-LU604_RS11500;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=LU604_RS11500;old_locus_tag=LU604_11500 NZ_CP089942.1 Protein Homology CDS 2174160 2174906 . + 0 ID=cds-WP_016169831.1;Parent=gene-LU604_RS11500;Dbxref=Genbank:WP_016169831.1;Name=WP_016169831.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=LU604_RS11500;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_016169831.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2174881 2176164 . + . ID=gene-LU604_RS11505;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=LU604_RS11505;old_locus_tag=LU604_11505 NZ_CP089942.1 Protein Homology CDS 2174881 2176164 . + 0 ID=cds-WP_233480604.1;Parent=gene-LU604_RS11505;Dbxref=Genbank:WP_233480604.1;Name=WP_233480604.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157408.1;locus_tag=LU604_RS11505;product=Fe-S cluster assembly protein SufD;protein_id=WP_233480604.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2176161 2177381 . + . ID=gene-LU604_RS11510;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=LU604_RS11510;old_locus_tag=LU604_11510 NZ_CP089942.1 Protein Homology CDS 2176161 2177381 . + 0 ID=cds-WP_233480605.1;Parent=gene-LU604_RS11510;Dbxref=Genbank:WP_233480605.1;Name=WP_233480605.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004386230.1;locus_tag=LU604_RS11510;product=cysteine desulfurase SufS;protein_id=WP_233480605.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2177404 2177826 . + . ID=gene-LU604_RS11515;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=LU604_RS11515;old_locus_tag=LU604_11515 NZ_CP089942.1 Protein Homology CDS 2177404 2177826 . + 0 ID=cds-WP_016169828.1;Parent=gene-LU604_RS11515;Dbxref=Genbank:WP_016169828.1;Name=WP_016169828.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096952.1;locus_tag=LU604_RS11515;product=cysteine desulfuration protein SufE;protein_id=WP_016169828.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2177943 2178089 . - . ID=gene-LU604_RS11520;Name=LU604_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11520;old_locus_tag=LU604_11520 NZ_CP089942.1 GeneMarkS-2+ CDS 2177943 2178089 . - 0 ID=cds-WP_233480606.1;Parent=gene-LU604_RS11520;Dbxref=Genbank:WP_233480606.1;Name=WP_233480606.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS11520;product=hypothetical protein;protein_id=WP_233480606.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2178428 2179468 . + . ID=gene-LU604_RS11525;Name=LU604_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11525;old_locus_tag=LU604_11525 NZ_CP089942.1 Protein Homology CDS 2178428 2179468 . + 0 ID=cds-WP_233478553.1-13;Parent=gene-LU604_RS11525;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS11525;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2180239 2180460 . + . ID=gene-LU604_RS11530;Name=LU604_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11530;old_locus_tag=LU604_11530 NZ_CP089942.1 Protein Homology CDS 2180239 2180460 . + 0 ID=cds-WP_233480607.1;Parent=gene-LU604_RS11530;Dbxref=Genbank:WP_233480607.1;Name=WP_233480607.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025677.2;locus_tag=LU604_RS11530;product=transposase zinc-binding domain-containing protein;protein_id=WP_233480607.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2180533 2181303 . + . ID=gene-LU604_RS11535;Name=LU604_RS11535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11535;old_locus_tag=LU604_11535;partial=true;pseudo=true;start_range=.,2180533 NZ_CP089942.1 Protein Homology CDS 2180533 2181303 . + 0 ID=cds-LU604_RS11535;Parent=gene-LU604_RS11535;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS11535;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,2180533;transl_table=11 NZ_CP089942.1 RefSeq gene 2181605 2181841 . + . ID=gene-LU604_RS11540;Name=LU604_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11540;old_locus_tag=LU604_11540 NZ_CP089942.1 Protein Homology CDS 2181605 2181841 . + 0 ID=cds-WP_016169824.1;Parent=gene-LU604_RS11540;Dbxref=Genbank:WP_016169824.1;Name=WP_016169824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157411.1;locus_tag=LU604_RS11540;product=major outer membrane lipoprotein;protein_id=WP_016169824.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2182368 2183911 . - . ID=gene-LU604_RS11545;Name=LU604_RS11545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11545;old_locus_tag=LU604_11545;pseudo=true NZ_CP089942.1 Protein Homology CDS 2182368 2183911 . - 0 ID=cds-LU604_RS11545;Parent=gene-LU604_RS11545;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080172.1;locus_tag=LU604_RS11545;product=IS66 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2183940 2184293 . - . ID=gene-LU604_RS11550;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=LU604_RS11550;old_locus_tag=LU604_11550 NZ_CP089942.1 Protein Homology CDS 2183940 2184293 . - 0 ID=cds-WP_233480608.1;Parent=gene-LU604_RS11550;Dbxref=Genbank:WP_233480608.1;Name=WP_233480608.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000624647.1;locus_tag=LU604_RS11550;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_233480608.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2184290 2184697 . - . ID=gene-LU604_RS11555;Name=LU604_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11555;old_locus_tag=LU604_11555 NZ_CP089942.1 Protein Homology CDS 2184290 2184697 . - 0 ID=cds-WP_233480609.1;Parent=gene-LU604_RS11555;Dbxref=Genbank:WP_233480609.1;Name=WP_233480609.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.2;locus_tag=LU604_RS11555;product=transposase;protein_id=WP_233480609.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2184852 2185892 . - . ID=gene-LU604_RS11560;Name=LU604_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11560;old_locus_tag=LU604_11560 NZ_CP089942.1 Protein Homology CDS 2184852 2185892 . - 0 ID=cds-WP_233481349.1;Parent=gene-LU604_RS11560;Dbxref=Genbank:WP_233481349.1;Name=WP_233481349.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS11560;product=IS481 family transposase;protein_id=WP_233481349.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2185971 2187154 . - . ID=gene-LU604_RS11565;Name=LU604_RS11565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11565;old_locus_tag=LU604_11565;pseudo=true NZ_CP089942.1 Protein Homology CDS 2185971 2187154 . - 0 ID=cds-LU604_RS11565;Parent=gene-LU604_RS11565;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611429.1;locus_tag=LU604_RS11565;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2187543 2188742 . + . ID=gene-LU604_RS11570;Name=LU604_RS11570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11570;old_locus_tag=LU604_11570;pseudo=true NZ_CP089942.1 Protein Homology CDS 2187543 2188742 . + 0 ID=cds-LU604_RS11570;Parent=gene-LU604_RS11570;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU604_RS11570;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2189008 2189444 . - . ID=gene-LU604_RS11575;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS11575;old_locus_tag=LU604_11575;pseudo=true NZ_CP089942.1 Protein Homology CDS 2189008 2189444 . - 0 ID=cds-LU604_RS11575;Parent=gene-LU604_RS11575;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU604_RS11575;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2189608 2191020 . - . ID=gene-LU604_RS11580;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=LU604_RS11580;old_locus_tag=LU604_11580 NZ_CP089942.1 Protein Homology CDS 2189608 2191020 . - 0 ID=cds-WP_233480610.1;Parent=gene-LU604_RS11580;Dbxref=Genbank:WP_233480610.1;Name=WP_233480610.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=LU604_RS11580;product=pyruvate kinase PykF;protein_id=WP_233480610.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2191044 2191214 . + . ID=gene-LU604_RS11585;Name=LU604_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11585;old_locus_tag=LU604_11585 NZ_CP089942.1 GeneMarkS-2+ CDS 2191044 2191214 . + 0 ID=cds-WP_161796967.1;Parent=gene-LU604_RS11585;Dbxref=Genbank:WP_161796967.1;Name=WP_161796967.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS11585;product=hypothetical protein;protein_id=WP_161796967.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2191376 2191452 . - . ID=gene-LU604_RS11590;Name=LU604_RS11590;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS11590;old_locus_tag=LU604_11590 NZ_CP089942.1 tRNAscan-SE tRNA 2191376 2191452 . - . ID=rna-LU604_RS11590;Parent=gene-LU604_RS11590;anticodon=(pos:complement(2191416..2191418));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS11590;product=tRNA-Val NZ_CP089942.1 tRNAscan-SE exon 2191376 2191452 . - . ID=exon-LU604_RS11590-1;Parent=rna-LU604_RS11590;anticodon=(pos:complement(2191416..2191418));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS11590;product=tRNA-Val NZ_CP089942.1 RefSeq gene 2191462 2191538 . - . ID=gene-LU604_RS11595;Name=LU604_RS11595;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS11595;old_locus_tag=LU604_11595 NZ_CP089942.1 tRNAscan-SE tRNA 2191462 2191538 . - . ID=rna-LU604_RS11595;Parent=gene-LU604_RS11595;anticodon=(pos:complement(2191502..2191504));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS11595;product=tRNA-Val NZ_CP089942.1 tRNAscan-SE exon 2191462 2191538 . - . ID=exon-LU604_RS11595-1;Parent=rna-LU604_RS11595;anticodon=(pos:complement(2191502..2191504));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS11595;product=tRNA-Val NZ_CP089942.1 RefSeq gene 2191543 2191619 . - . ID=gene-LU604_RS11600;Name=LU604_RS11600;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS11600;old_locus_tag=LU604_11600 NZ_CP089942.1 tRNAscan-SE tRNA 2191543 2191619 . - . ID=rna-LU604_RS11600;Parent=gene-LU604_RS11600;anticodon=(pos:complement(2191583..2191585));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS11600;product=tRNA-Val NZ_CP089942.1 tRNAscan-SE exon 2191543 2191619 . - . ID=exon-LU604_RS11600-1;Parent=rna-LU604_RS11600;anticodon=(pos:complement(2191583..2191585));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS11600;product=tRNA-Val NZ_CP089942.1 RefSeq gene 2191768 2193141 . - . ID=gene-LU604_RS11605;Name=LU604_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11605;old_locus_tag=LU604_11605 NZ_CP089942.1 Protein Homology CDS 2191768 2193141 . - 0 ID=cds-WP_233480611.1;Parent=gene-LU604_RS11605;Dbxref=Genbank:WP_233480611.1;Name=WP_233480611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169817.1;locus_tag=LU604_RS11605;product=MATE family efflux transporter;protein_id=WP_233480611.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2193420 2194073 . + . ID=gene-LU604_RS11610;Name=LU604_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11610;old_locus_tag=LU604_11610 NZ_CP089942.1 Protein Homology CDS 2193420 2194073 . + 0 ID=cds-WP_233480612.1;Parent=gene-LU604_RS11610;Dbxref=Genbank:WP_233480612.1;Name=WP_233480612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169816.1;locus_tag=LU604_RS11610;product=riboflavin synthase subunit alpha;protein_id=WP_233480612.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2194320 2195501 . - . ID=gene-LU604_RS11615;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;locus_tag=LU604_RS11615;old_locus_tag=LU604_11615 NZ_CP089942.1 Protein Homology CDS 2194320 2195501 . - 0 ID=cds-WP_233480613.1;Parent=gene-LU604_RS11615;Dbxref=Genbank:WP_233480613.1;Name=WP_233480613.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169815.1;locus_tag=LU604_RS11615;product=purine nucleoside transporter PunC;protein_id=WP_233480613.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2195614 2196519 . + . ID=gene-LU604_RS11620;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=LU604_RS11620;old_locus_tag=LU604_11620 NZ_CP089942.1 Protein Homology CDS 2195614 2196519 . + 0 ID=cds-WP_233480614.1;Parent=gene-LU604_RS11620;Dbxref=Genbank:WP_233480614.1;Name=WP_233480614.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169814.1;locus_tag=LU604_RS11620;product=DNA-binding transcriptional activator PunR;protein_id=WP_233480614.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2196647 2197666 . - . ID=gene-LU604_RS11625;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=LU604_RS11625;old_locus_tag=LU604_11625 NZ_CP089942.1 Protein Homology CDS 2196647 2197666 . - 0 ID=cds-WP_233480615.1;Parent=gene-LU604_RS11625;Dbxref=Genbank:WP_233480615.1;Name=WP_233480615.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169813.1;locus_tag=LU604_RS11625;product=HTH-type transcriptional repressor PurR;protein_id=WP_233480615.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2198072 2198878 . - . ID=gene-LU604_RS11630;Name=LU604_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11630;old_locus_tag=LU604_11630 NZ_CP089942.1 Protein Homology CDS 2198072 2198878 . - 0 ID=cds-WP_233480783.1;Parent=gene-LU604_RS11630;Dbxref=Genbank:WP_233480783.1;Name=WP_233480783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593610.1;locus_tag=LU604_RS11630;product=C40 family peptidase;protein_id=WP_233480783.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2200017 2200391 . + . ID=gene-LU604_RS11635;Name=LU604_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11635;old_locus_tag=LU604_11635 NZ_CP089942.1 Protein Homology CDS 2200017 2200391 . + 0 ID=cds-WP_233480616.1;Parent=gene-LU604_RS11635;Dbxref=Genbank:WP_233480616.1;Name=WP_233480616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189481.1;locus_tag=LU604_RS11635;product=CCDC90 family protein;protein_id=WP_233480616.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2200568 2200987 . - . ID=gene-LU604_RS11640;Name=LU604_RS11640;end_range=2200987,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11640;old_locus_tag=LU604_11640;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2200568 2200987 . - 0 ID=cds-LU604_RS11640;Parent=gene-LU604_RS11640;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2200987,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611788.1;locus_tag=LU604_RS11640;partial=true;product=IS4/IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2201353 2201602 . - . ID=gene-LU604_RS11645;Name=LU604_RS11645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11645;old_locus_tag=LU604_11645;pseudo=true NZ_CP089942.1 Protein Homology CDS 2201353 2201602 . - 0 ID=cds-LU604_RS11645;Parent=gene-LU604_RS11645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001261935.1;locus_tag=LU604_RS11645;product=DinI-like family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2201949 2202290 . + . ID=gene-LU604_RS11650;Name=LU604_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11650;old_locus_tag=LU604_11650 NZ_CP089942.1 Protein Homology CDS 2201949 2202290 . + 0 ID=cds-WP_161796966.1;Parent=gene-LU604_RS11650;Dbxref=Genbank:WP_161796966.1;Name=WP_161796966.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201938.1;locus_tag=LU604_RS11650;product=Grx4 family monothiol glutaredoxin;protein_id=WP_161796966.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2202568 2203218 . - . ID=gene-LU604_RS11655;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=LU604_RS11655;old_locus_tag=LU604_11655 NZ_CP089942.1 Protein Homology CDS 2202568 2203218 . - 0 ID=cds-WP_016169801.1;Parent=gene-LU604_RS11655;Dbxref=Genbank:WP_016169801.1;Name=WP_016169801.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201940.1;locus_tag=LU604_RS11655;product=ribonuclease T;protein_id=WP_016169801.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2203321 2203728 . - . ID=gene-LU604_RS11660;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=LU604_RS11660;old_locus_tag=LU604_11660 NZ_CP089942.1 Protein Homology CDS 2203321 2203728 . - 0 ID=cds-WP_233480784.1;Parent=gene-LU604_RS11660;Dbxref=Genbank:WP_233480784.1;Name=WP_233480784.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025612.1;locus_tag=LU604_RS11660;product=lactoylglutathione lyase;protein_id=WP_233480784.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2203815 2204297 . - . ID=gene-LU604_RS11665;Name=LU604_RS11665;end_range=2204297,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11665;old_locus_tag=LU604_11665;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2203815 2204297 . - 0 ID=cds-LU604_RS11665;Parent=gene-LU604_RS11665;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2204297,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441536.1;locus_tag=LU604_RS11665;partial=true;product=N-ethylmaleimide reductase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2204529 2204768 . + . ID=gene-LU604_RS11670;Name=LU604_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11670;old_locus_tag=LU604_11670 NZ_CP089942.1 Protein Homology CDS 2204529 2204768 . + 0 ID=cds-WP_233481626.1;Parent=gene-LU604_RS11670;Dbxref=Genbank:WP_233481626.1;Name=WP_233481626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891815.1;locus_tag=LU604_RS11670;product=DUF1289 domain-containing protein;protein_id=WP_233481626.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2205607 2206050 . + . ID=gene-LU604_RS11675;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=LU604_RS11675;old_locus_tag=LU604_11675 NZ_CP089942.1 Protein Homology CDS 2205607 2206050 . + 0 ID=cds-WP_233480617.1;Parent=gene-LU604_RS11675;Dbxref=Genbank:WP_233480617.1;Name=WP_233480617.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=LU604_RS11675;product=transcriptional regulator SlyA;protein_id=WP_233480617.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2206145 2206612 . - . ID=gene-LU604_RS11680;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=LU604_RS11680;old_locus_tag=LU604_11680 NZ_CP089942.1 Protein Homology CDS 2206145 2206612 . - 0 ID=cds-WP_016169800.1;Parent=gene-LU604_RS11680;Dbxref=Genbank:WP_016169800.1;Name=WP_016169800.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310377.1;locus_tag=LU604_RS11680;product=outer membrane lipoprotein SlyB;protein_id=WP_016169800.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2206900 2208021 . + . ID=gene-LU604_RS11685;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=LU604_RS11685;old_locus_tag=LU604_11685 NZ_CP089942.1 Protein Homology CDS 2206900 2208021 . + 0 ID=cds-WP_233480785.1;Parent=gene-LU604_RS11685;Dbxref=Genbank:WP_233480785.1;Name=WP_233480785.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169799.1;locus_tag=LU604_RS11685;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_233480785.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2208372 2209028 . + . ID=gene-LU604_RS11690;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=LU604_RS11690;old_locus_tag=LU604_11690 NZ_CP089942.1 Protein Homology CDS 2208372 2209028 . + 0 ID=cds-WP_016169798.1;Parent=gene-LU604_RS11690;Dbxref=Genbank:WP_016169798.1;Name=WP_016169798.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=LU604_RS11690;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_016169798.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2209176 2210450 . + . ID=gene-LU604_RS11695;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=LU604_RS11695;old_locus_tag=LU604_11695 NZ_CP089942.1 Protein Homology CDS 2209176 2210450 . + 0 ID=cds-WP_233480618.1;Parent=gene-LU604_RS11695;Dbxref=Genbank:WP_233480618.1;Name=WP_233480618.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=LU604_RS11695;product=tyrosine--tRNA ligase;protein_id=WP_233480618.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2210500 2211369 . + . ID=gene-LU604_RS11700;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=LU604_RS11700;old_locus_tag=LU604_11700 NZ_CP089942.1 Protein Homology CDS 2210500 2211369 . + 0 ID=cds-WP_233481627.1;Parent=gene-LU604_RS11700;Dbxref=Genbank:WP_233481627.1;Name=WP_233481627.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169796.1;locus_tag=LU604_RS11700;product=pyridoxal kinase PdxY;protein_id=WP_233481627.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2211513 2211908 . + . ID=gene-LU604_RS11705;Name=LU604_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11705;old_locus_tag=LU604_11705 NZ_CP089942.1 GeneMarkS-2+ CDS 2211513 2211908 . + 0 ID=cds-WP_233481628.1;Parent=gene-LU604_RS11705;Dbxref=Genbank:WP_233481628.1;Name=WP_233481628.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS11705;product=hypothetical protein;protein_id=WP_233481628.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2211895 2212422 . + . ID=gene-LU604_RS11710;Name=LU604_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11710;old_locus_tag=LU604_11710 NZ_CP089942.1 GeneMarkS-2+ CDS 2211895 2212422 . + 0 ID=cds-WP_233480620.1;Parent=gene-LU604_RS11710;Dbxref=Genbank:WP_233480620.1;Name=WP_233480620.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS11710;product=hypothetical protein;protein_id=WP_233480620.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2212533 2213135 . - . ID=gene-LU604_RS11715;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=LU604_RS11715;old_locus_tag=LU604_11715 NZ_CP089942.1 Protein Homology CDS 2212533 2213135 . - 0 ID=cds-WP_016169794.1;Parent=gene-LU604_RS11715;Dbxref=Genbank:WP_016169794.1;Name=WP_016169794.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201956.1;locus_tag=LU604_RS11715;product=glutathione transferase GstA;protein_id=WP_016169794.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2213342 2213485 . - . ID=gene-LU604_RS11720;Name=LU604_RS11720;end_range=2213485,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11720;old_locus_tag=LU604_11720;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2213342 2213485 . - 0 ID=cds-LU604_RS11720;Parent=gene-LU604_RS11720;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2213485,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802215.1;locus_tag=LU604_RS11720;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2213489 2214236 . + . ID=gene-LU604_RS11725;Name=LU604_RS11725;end_range=2214236,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11725;old_locus_tag=LU604_11725;partial=true;pseudo=true;start_range=.,2213489 NZ_CP089942.1 Protein Homology CDS 2213489 2214236 . + 0 ID=cds-LU604_RS11725;Parent=gene-LU604_RS11725;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016614,GO:0050660;end_range=2214236,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157459.1;locus_tag=LU604_RS11725;partial=true;product=GMC family oxidoreductase N-terminal domain-containing protein;pseudo=true;start_range=.,2213489;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2214438 2215112 . + . ID=gene-LU604_RS11730;Name=LU604_RS11730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11730;old_locus_tag=LU604_11730;partial=true;pseudo=true;start_range=.,2214438 NZ_CP089942.1 Protein Homology CDS 2214438 2215112 . + 0 ID=cds-LU604_RS11730;Parent=gene-LU604_RS11730;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016614;gbkey=CDS;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201963.1;locus_tag=LU604_RS11730;partial=true;product=GMC oxidoreductase;pseudo=true;start_range=.,2214438;transl_table=11 NZ_CP089942.1 RefSeq gene 2215220 2215786 . - . ID=gene-LU604_RS11735;Name=LU604_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11735;old_locus_tag=LU604_11735 NZ_CP089942.1 GeneMarkS-2+ CDS 2215220 2215786 . - 0 ID=cds-WP_233480621.1;Parent=gene-LU604_RS11735;Dbxref=Genbank:WP_233480621.1;Name=WP_233480621.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS11735;product=hypothetical protein;protein_id=WP_233480621.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2216115 2216747 . - . ID=gene-LU604_RS11740;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=LU604_RS11740;old_locus_tag=LU604_11740 NZ_CP089942.1 Protein Homology CDS 2216115 2216747 . - 0 ID=cds-WP_016169791.1;Parent=gene-LU604_RS11740;Dbxref=Genbank:WP_016169791.1;Name=WP_016169791.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849001.1;locus_tag=LU604_RS11740;product=endonuclease III;protein_id=WP_016169791.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2216744 2217445 . - . ID=gene-LU604_RS11745;Name=LU604_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11745;old_locus_tag=LU604_11745 NZ_CP089942.1 Protein Homology CDS 2216744 2217445 . - 0 ID=cds-WP_233480622.1;Parent=gene-LU604_RS11745;Dbxref=Genbank:WP_233480622.1;Name=WP_233480622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289652.1;locus_tag=LU604_RS11745;product=electron transport complex subunit E;protein_id=WP_233480622.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2217438 2218070 . - . ID=gene-LU604_RS11750;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=LU604_RS11750;old_locus_tag=LU604_11750 NZ_CP089942.1 Protein Homology CDS 2217438 2218070 . - 0 ID=cds-WP_016169789.1;Parent=gene-LU604_RS11750;Dbxref=Genbank:WP_016169789.1;Name=WP_016169789.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668173.1;locus_tag=LU604_RS11750;product=electron transport complex subunit RsxG;protein_id=WP_016169789.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2218070 2219131 . - . ID=gene-LU604_RS11755;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=LU604_RS11755;old_locus_tag=LU604_11755 NZ_CP089942.1 Protein Homology CDS 2218070 2219131 . - 0 ID=cds-WP_016169788.1;Parent=gene-LU604_RS11755;Dbxref=Genbank:WP_016169788.1;Name=WP_016169788.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169738.1;locus_tag=LU604_RS11755;product=electron transport complex subunit RsxD;protein_id=WP_016169788.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2219132 2220931 . - . ID=gene-LU604_RS11760;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=LU604_RS11760;old_locus_tag=LU604_11760 NZ_CP089942.1 Protein Homology CDS 2219132 2220931 . - 0 ID=cds-WP_233480623.1;Parent=gene-LU604_RS11760;Dbxref=Genbank:WP_233480623.1;Name=WP_233480623.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169787.1;locus_tag=LU604_RS11760;product=electron transport complex subunit RsxC;protein_id=WP_233480623.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2220924 2221499 . - . ID=gene-LU604_RS11765;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=LU604_RS11765;old_locus_tag=LU604_11765 NZ_CP089942.1 Protein Homology CDS 2220924 2221499 . - 0 ID=cds-WP_233480624.1;Parent=gene-LU604_RS11765;Dbxref=Genbank:WP_233480624.1;Name=WP_233480624.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441510.1;locus_tag=LU604_RS11765;product=electron transport complex subunit RsxB;protein_id=WP_233480624.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2221499 2222080 . - . ID=gene-LU604_RS11770;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=LU604_RS11770;old_locus_tag=LU604_11770 NZ_CP089942.1 Protein Homology CDS 2221499 2222080 . - 0 ID=cds-WP_016169785.1;Parent=gene-LU604_RS11770;Dbxref=Genbank:WP_016169785.1;Name=WP_016169785.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010245384.1;locus_tag=LU604_RS11770;product=electron transport complex subunit RsxA;protein_id=WP_016169785.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2222797 2223447 . + . ID=gene-LU604_RS11775;Name=LU604_RS11775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11775;old_locus_tag=LU604_11775;pseudo=true NZ_CP089942.1 Protein Homology CDS 2222797 2223447 . + 0 ID=cds-LU604_RS11775;Parent=gene-LU604_RS11775;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS11775;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2223440 2224459 . - . ID=gene-LU604_RS11780;Name=LU604_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11780;old_locus_tag=LU604_11780 NZ_CP089942.1 Protein Homology CDS 2223440 2224459 . - 0 ID=cds-WP_016169679.1;Parent=gene-LU604_RS11780;Dbxref=Genbank:WP_016169679.1;Name=WP_016169679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157579.1;locus_tag=LU604_RS11780;product=AI-2E family transporter;protein_id=WP_016169679.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2224591 2224782 . - . ID=gene-LU604_RS11785;Name=LU604_RS11785;end_range=2224782,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11785;old_locus_tag=LU604_11785;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2224591 2224782 . - 0 ID=cds-LU604_RS11785;Parent=gene-LU604_RS11785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2224782,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157581.1;locus_tag=LU604_RS11785;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2224850 2224999 . + . ID=gene-LU604_RS11790;Name=LU604_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11790;old_locus_tag=LU604_11790 NZ_CP089942.1 GeneMarkS-2+ CDS 2224850 2224999 . + 0 ID=cds-WP_157275199.1;Parent=gene-LU604_RS11790;Dbxref=Genbank:WP_157275199.1;Name=WP_157275199.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS11790;product=hypothetical protein;protein_id=WP_157275199.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2224990 2225371 . - . ID=gene-LU604_RS11795;Name=LU604_RS11795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11795;old_locus_tag=LU604_11795;partial=true;pseudo=true;start_range=.,2224990 NZ_CP089942.1 Protein Homology CDS 2224990 2225371 . - 0 ID=cds-LU604_RS11795;Parent=gene-LU604_RS11795;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=LU604_RS11795;partial=true;product=transposase;pseudo=true;start_range=.,2224990;transl_table=11 NZ_CP089942.1 RefSeq gene 2225454 2225714 . + . ID=gene-LU604_RS11800;Name=LU604_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11800;old_locus_tag=LU604_11800 NZ_CP089942.1 Protein Homology CDS 2225454 2225714 . + 0 ID=cds-WP_108657642.1;Parent=gene-LU604_RS11800;Dbxref=Genbank:WP_108657642.1;Name=WP_108657642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242983.1;locus_tag=LU604_RS11800;product=hypothetical protein;protein_id=WP_108657642.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2225916 2226778 . + . ID=gene-LU604_RS11805;Name=LU604_RS11805;end_range=2226778,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11805;old_locus_tag=LU604_11805;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2225916 2226778 . + 0 ID=cds-LU604_RS11805;Parent=gene-LU604_RS11805;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2226778,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS11805;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2226837 2227871 . - . ID=gene-LU604_RS11810;Name=LU604_RS11810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11810;old_locus_tag=LU604_11810;pseudo=true NZ_CP089942.1 Protein Homology CDS 2226837 2227871 . - 0 ID=cds-LU604_RS11810;Parent=gene-LU604_RS11810;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS11810;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2227985 2228413 . - . ID=gene-LU604_RS11815;Name=LU604_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11815;old_locus_tag=LU604_11815 NZ_CP089942.1 Protein Homology CDS 2227985 2228413 . - 0 ID=cds-WP_233480625.1;Parent=gene-LU604_RS11815;Dbxref=Genbank:WP_233480625.1;Name=WP_233480625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169781.1;locus_tag=LU604_RS11815;product=hypothetical protein;protein_id=WP_233480625.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2228456 2229103 . - . ID=gene-LU604_RS11820;Name=LU604_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11820;old_locus_tag=LU604_11820 NZ_CP089942.1 Protein Homology CDS 2228456 2229103 . - 0 ID=cds-WP_233480626.1;Parent=gene-LU604_RS11820;Dbxref=Genbank:WP_233480626.1;Name=WP_233480626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358146.1;locus_tag=LU604_RS11820;product=hypothetical protein;protein_id=WP_233480626.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2229305 2229640 . - . ID=gene-LU604_RS11825;Name=LU604_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11825;old_locus_tag=LU604_11825 NZ_CP089942.1 GeneMarkS-2+ CDS 2229305 2229640 . - 0 ID=cds-WP_016169688.1;Parent=gene-LU604_RS11825;Dbxref=Genbank:WP_016169688.1;Name=WP_016169688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS11825;product=hypothetical protein;protein_id=WP_016169688.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2230129 2230788 . + . ID=gene-LU604_RS11830;Name=LU604_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11830;old_locus_tag=LU604_11830 NZ_CP089942.1 Protein Homology CDS 2230129 2230788 . + 0 ID=cds-WP_233480627.1;Parent=gene-LU604_RS11830;Dbxref=Genbank:WP_233480627.1;Name=WP_233480627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169689.1;locus_tag=LU604_RS11830;product=class I SAM-dependent methyltransferase;protein_id=WP_233480627.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2230855 2231289 . + . ID=gene-LU604_RS11835;Name=LU604_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11835;old_locus_tag=LU604_11835 NZ_CP089942.1 Protein Homology CDS 2230855 2231289 . + 0 ID=cds-WP_016169690.1;Parent=gene-LU604_RS11835;Dbxref=Genbank:WP_016169690.1;Name=WP_016169690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014605776.1;locus_tag=LU604_RS11835;product=DoxX family protein;protein_id=WP_016169690.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2231381 2232706 . - . ID=gene-LU604_RS11840;Name=LU604_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11840;old_locus_tag=LU604_11840 NZ_CP089942.1 Protein Homology CDS 2231381 2232706 . - 0 ID=cds-WP_233480628.1;Parent=gene-LU604_RS11840;Dbxref=Genbank:WP_233480628.1;Name=WP_233480628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169691.1;locus_tag=LU604_RS11840;product=aromatic acid/H+ symport family MFS transporter;protein_id=WP_233480628.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2233186 2233425 . - . ID=gene-LU604_RS11845;Name=LU604_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11845;old_locus_tag=LU604_11845 NZ_CP089942.1 GeneMarkS-2+ CDS 2233186 2233425 . - 0 ID=cds-WP_233480629.1;Parent=gene-LU604_RS11845;Dbxref=Genbank:WP_233480629.1;Name=WP_233480629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS11845;product=Smr/MutS family endonuclease;protein_id=WP_233480629.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2233729 2234484 . + . ID=gene-LU604_RS11850;Name=LU604_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11850;old_locus_tag=LU604_11850 NZ_CP089942.1 Protein Homology CDS 2233729 2234484 . + 0 ID=cds-WP_016169698.1;Parent=gene-LU604_RS11850;Dbxref=Genbank:WP_016169698.1;Name=WP_016169698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=LU604_RS11850;product=FNR family transcription factor;protein_id=WP_016169698.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2234865 2235812 . + . ID=gene-LU604_RS11855;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=LU604_RS11855;old_locus_tag=LU604_11855 NZ_CP089942.1 Protein Homology CDS 2234865 2235812 . + 0 ID=cds-WP_233480630.1;Parent=gene-LU604_RS11855;Dbxref=Genbank:WP_233480630.1;Name=WP_233480630.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169699.1;locus_tag=LU604_RS11855;product=universal stress protein UspE;protein_id=WP_233480630.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2235918 2237306 . - . ID=gene-LU604_RS11860;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=LU604_RS11860;old_locus_tag=LU604_11860 NZ_CP089942.1 Protein Homology CDS 2235918 2237306 . - 0 ID=cds-WP_016169700.1;Parent=gene-LU604_RS11860;Dbxref=Genbank:WP_016169700.1;Name=WP_016169700.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226734.1;locus_tag=LU604_RS11860;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_016169700.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2237317 2238849 . - . ID=gene-LU604_RS11865;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=LU604_RS11865;old_locus_tag=LU604_11865 NZ_CP089942.1 Protein Homology CDS 2237317 2238849 . - 0 ID=cds-WP_233480631.1;Parent=gene-LU604_RS11865;Dbxref=Genbank:WP_233480631.1;Name=WP_233480631.1;Ontology_term=GO:0008750;gbkey=CDS;gene=pntA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169701.1;locus_tag=LU604_RS11865;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_233480631.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2239078 2239845 . - . ID=gene-LU604_RS11870;Name=LU604_RS11870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11870;old_locus_tag=LU604_11870;pseudo=true NZ_CP089942.1 Protein Homology CDS 2239078 2239845 . - 0 ID=cds-LU604_RS11870;Parent=gene-LU604_RS11870;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS11870;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2240166 2241119 . + . ID=gene-LU604_RS11875;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=LU604_RS11875;old_locus_tag=LU604_11875 NZ_CP089942.1 Protein Homology CDS 2240166 2241119 . + 0 ID=cds-WP_016169704.1;Parent=gene-LU604_RS11875;Dbxref=Genbank:WP_016169704.1;Name=WP_016169704.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169828.1;locus_tag=LU604_RS11875;product=DUF1471 family protein YdgH;protein_id=WP_016169704.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2241334 2241747 . - . ID=gene-LU604_RS11880;Name=LU604_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11880;old_locus_tag=LU604_11880 NZ_CP089942.1 Protein Homology CDS 2241334 2241747 . - 0 ID=cds-WP_016169705.1;Parent=gene-LU604_RS11880;Dbxref=Genbank:WP_016169705.1;Name=WP_016169705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544310.1;locus_tag=LU604_RS11880;product=hypothetical protein;protein_id=WP_016169705.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2241925 2242653 . + . ID=gene-LU604_RS11885;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=LU604_RS11885;old_locus_tag=LU604_11885 NZ_CP089942.1 Protein Homology CDS 2241925 2242653 . + 0 ID=cds-WP_233480632.1;Parent=gene-LU604_RS11885;Dbxref=Genbank:WP_233480632.1;Name=WP_233480632.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169706.1;locus_tag=LU604_RS11885;product=two-component system response regulator RstA;protein_id=WP_233480632.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2242650 2243948 . + . ID=gene-LU604_RS11890;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=LU604_RS11890;old_locus_tag=LU604_11890 NZ_CP089942.1 Protein Homology CDS 2242650 2243948 . + 0 ID=cds-WP_016169707.1;Parent=gene-LU604_RS11890;Dbxref=Genbank:WP_016169707.1;Name=WP_016169707.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025877.1;locus_tag=LU604_RS11890;product=two-component system sensor histidine kinase RstB;protein_id=WP_016169707.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2243976 2245466 . + . ID=gene-LU604_RS11895;Name=LU604_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11895;old_locus_tag=LU604_11895 NZ_CP089942.1 Protein Homology CDS 2243976 2245466 . + 0 ID=cds-WP_233480633.1;Parent=gene-LU604_RS11895;Dbxref=Genbank:WP_233480633.1;Name=WP_233480633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169708.1;locus_tag=LU604_RS11895;product=carboxypeptidase M32;protein_id=WP_233480633.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2245654 2245893 . + . ID=gene-LU604_RS11900;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=LU604_RS11900;old_locus_tag=LU604_11900 NZ_CP089942.1 Protein Homology CDS 2245654 2245893 . + 0 ID=cds-WP_233480634.1;Parent=gene-LU604_RS11900;Dbxref=Genbank:WP_233480634.1;Name=WP_233480634.1;gbkey=CDS;gene=asr;inference=COORDINATES: protein motif:HMM:NF033636.1;locus_tag=LU604_RS11900;product=acid resistance repetitive basic protein Asr;protein_id=WP_233480634.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2246173 2246988 . + . ID=gene-LU604_RS11905;Name=LU604_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11905;old_locus_tag=LU604_11905 NZ_CP089942.1 Protein Homology CDS 2246173 2246988 . + 0 ID=cds-WP_016169710.1;Parent=gene-LU604_RS11905;Dbxref=Genbank:WP_016169710.1;Name=WP_016169710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202016.1;locus_tag=LU604_RS11905;product=serine protease;protein_id=WP_016169710.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2247266 2247424 . - . ID=gene-LU604_RS11910;Name=LU604_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11910;old_locus_tag=LU604_11910 NZ_CP089942.1 Protein Homology CDS 2247266 2247424 . - 0 ID=cds-WP_016169711.1;Parent=gene-LU604_RS11910;Dbxref=Genbank:WP_016169711.1;Name=WP_016169711.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013676.2;locus_tag=LU604_RS11910;product=Tn3 family transposase;protein_id=WP_016169711.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2247537 2247932 . - . ID=gene-LU604_RS11915;Name=LU604_RS11915;end_range=2247932,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11915;old_locus_tag=LU604_11915;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2247537 2247932 . - 0 ID=cds-LU604_RS11915;Parent=gene-LU604_RS11915;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2247932,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU604_RS11915;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2247915 2248037 . - . ID=gene-LU604_RS11920;Name=LU604_RS11920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11920;old_locus_tag=LU604_11920;partial=true;pseudo=true;start_range=.,2247915 NZ_CP089942.1 Protein Homology CDS 2247915 2248037 . - 0 ID=cds-LU604_RS11920;Parent=gene-LU604_RS11920;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858395.1;locus_tag=LU604_RS11920;partial=true;product=IS91 family transposase;pseudo=true;start_range=.,2247915;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2248061 2248234 . - . ID=gene-LU604_RS11925;Name=LU604_RS11925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11925;old_locus_tag=LU604_11925;partial=true;pseudo=true;start_range=.,2248061 NZ_CP089942.1 Protein Homology CDS 2248061 2248234 . - 0 ID=cds-LU604_RS11925;Parent=gene-LU604_RS11925;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707455.1;locus_tag=LU604_RS11925;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2248061;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2248338 2249360 . - . ID=gene-LU604_RS11930;Name=LU604_RS11930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11930;old_locus_tag=LU604_11930;pseudo=true NZ_CP089942.1 Protein Homology CDS 2248338 2249360 . - 0 ID=cds-LU604_RS11930;Parent=gene-LU604_RS11930;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS11930;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2249565 2249894 . - . ID=gene-LU604_RS11935;Name=LU604_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11935;old_locus_tag=LU604_11935 NZ_CP089942.1 Protein Homology CDS 2249565 2249894 . - 0 ID=cds-WP_233480635.1;Parent=gene-LU604_RS11935;Dbxref=Genbank:WP_233480635.1;Name=WP_233480635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169715.1;locus_tag=LU604_RS11935;product=hypothetical protein;protein_id=WP_233480635.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2250000 2251613 . - . ID=gene-LU604_RS11940;Name=LU604_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11940;old_locus_tag=LU604_11940 NZ_CP089942.1 Protein Homology CDS 2250000 2251613 . - 0 ID=cds-WP_233480636.1;Parent=gene-LU604_RS11940;Dbxref=Genbank:WP_233480636.1;Name=WP_233480636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169857.1;locus_tag=LU604_RS11940;product=peptide ABC transporter substrate-binding protein;protein_id=WP_233480636.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2251886 2252604 . + . ID=gene-LU604_RS11945;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=pseudogene;locus_tag=LU604_RS11945;old_locus_tag=LU604_11945;pseudo=true NZ_CP089942.1 Protein Homology CDS 2251886 2252604 . + 0 ID=cds-LU604_RS11945;Parent=gene-LU604_RS11945;Note=frameshifted%3B internal stop;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014832119.1;locus_tag=LU604_RS11945;product=murein tripeptide amidase MpaA;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2252575 2252989 . - . ID=gene-LU604_RS11950;Name=LU604_RS11950;end_range=2252989,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11950;old_locus_tag=LU604_11950;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2252575 2252989 . - 0 ID=cds-LU604_RS11950;Parent=gene-LU604_RS11950;Note=catalyzes the epimerization of L-alanyl-D-glutamate to L-alanyl-L-glutamate%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2252989,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157692.1;locus_tag=LU604_RS11950;partial=true;product=L-Ala-D/L-Glu epimerase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2252984 2253103 . + . ID=gene-LU604_RS11955;Name=LU604_RS11955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS11955;old_locus_tag=LU604_11955;partial=true;pseudo=true;start_range=.,2252984 NZ_CP089942.1 Protein Homology CDS 2252984 2253103 . + 0 ID=cds-LU604_RS11955;Parent=gene-LU604_RS11955;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850226.1;locus_tag=LU604_RS11955;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2252984;transl_table=11 NZ_CP089942.1 RefSeq gene 2253153 2254727 . - . ID=gene-LU604_RS11960;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=LU604_RS11960;old_locus_tag=LU604_11960 NZ_CP089942.1 Protein Homology CDS 2253153 2254727 . - 0 ID=cds-WP_016169721.1;Parent=gene-LU604_RS11960;Dbxref=Genbank:WP_016169721.1;Name=WP_016169721.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157694.1;locus_tag=LU604_RS11960;product=transcriptional regulator TyrR;protein_id=WP_016169721.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2254820 2255860 . - . ID=gene-LU604_RS11965;Name=LU604_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11965;old_locus_tag=LU604_11965 NZ_CP089942.1 Protein Homology CDS 2254820 2255860 . - 0 ID=cds-WP_233480637.1;Parent=gene-LU604_RS11965;Dbxref=Genbank:WP_233480637.1;Name=WP_233480637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169722.1;locus_tag=LU604_RS11965;product=TIGR01620 family protein;protein_id=WP_233480637.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2255857 2257254 . - . ID=gene-LU604_RS11970;Name=LU604_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS11970;old_locus_tag=LU604_11970 NZ_CP089942.1 Protein Homology CDS 2255857 2257254 . - 0 ID=cds-WP_233480786.1;Parent=gene-LU604_RS11970;Dbxref=Genbank:WP_233480786.1;Name=WP_233480786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=LU604_RS11970;product=YcjX family protein;protein_id=WP_233480786.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2257315 2257539 . - . ID=gene-LU604_RS11975;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=LU604_RS11975;old_locus_tag=LU604_11975 NZ_CP089942.1 Protein Homology CDS 2257315 2257539 . - 0 ID=cds-WP_016169724.1;Parent=gene-LU604_RS11975;Dbxref=Genbank:WP_016169724.1;Name=WP_016169724.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202322.1;locus_tag=LU604_RS11975;product=phage shock protein PspD;protein_id=WP_016169724.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2257585 2257938 . - . ID=gene-LU604_RS11980;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=LU604_RS11980;old_locus_tag=LU604_11980 NZ_CP089942.1 Protein Homology CDS 2257585 2257938 . - 0 ID=cds-WP_016169725.1;Parent=gene-LU604_RS11980;Dbxref=Genbank:WP_016169725.1;Name=WP_016169725.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025902.1;locus_tag=LU604_RS11980;product=envelope stress response membrane protein PspC;protein_id=WP_016169725.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2257935 2258162 . - . ID=gene-LU604_RS11985;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=LU604_RS11985;old_locus_tag=LU604_11985 NZ_CP089942.1 Protein Homology CDS 2257935 2258162 . - 0 ID=cds-WP_016169726.1;Parent=gene-LU604_RS11985;Dbxref=Genbank:WP_016169726.1;Name=WP_016169726.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=LU604_RS11985;product=envelope stress response membrane protein PspB;protein_id=WP_016169726.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2258204 2258869 . - . ID=gene-LU604_RS11990;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=LU604_RS11990;old_locus_tag=LU604_11990 NZ_CP089942.1 Protein Homology CDS 2258204 2258869 . - 0 ID=cds-WP_016169727.1;Parent=gene-LU604_RS11990;Dbxref=Genbank:WP_016169727.1;Name=WP_016169727.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357983.1;locus_tag=LU604_RS11990;product=phage shock protein PspA;protein_id=WP_016169727.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2259034 2260035 . + . ID=gene-LU604_RS11995;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=LU604_RS11995;old_locus_tag=LU604_11995 NZ_CP089942.1 Protein Homology CDS 2259034 2260035 . + 0 ID=cds-WP_016169728.1;Parent=gene-LU604_RS11995;Dbxref=Genbank:WP_016169728.1;Name=WP_016169728.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378012.1;locus_tag=LU604_RS11995;product=phage shock protein operon transcriptional activator;protein_id=WP_016169728.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2260615 2262219 . + . ID=gene-LU604_RS12000;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=LU604_RS12000;old_locus_tag=LU604_12000 NZ_CP089942.1 Protein Homology CDS 2260615 2262219 . + 0 ID=cds-WP_233480787.1;Parent=gene-LU604_RS12000;Dbxref=Genbank:WP_233480787.1;Name=WP_233480787.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=sapA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169729.1;locus_tag=LU604_RS12000;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_233480787.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2262213 2263178 . + . ID=gene-LU604_RS12005;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=LU604_RS12005;old_locus_tag=LU604_12005 NZ_CP089942.1 Protein Homology CDS 2262213 2263178 . + 0 ID=cds-WP_233480638.1;Parent=gene-LU604_RS12005;Dbxref=Genbank:WP_233480638.1;Name=WP_233480638.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169730.1;locus_tag=LU604_RS12005;product=putrescine ABC transporter permease SapB;protein_id=WP_233480638.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2263365 2263988 . + . ID=gene-LU604_RS12010;Name=LU604_RS12010;end_range=2263988,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12010;old_locus_tag=LU604_12010;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2263365 2263988 . + 0 ID=cds-LU604_RS12010;Parent=gene-LU604_RS12010;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2263988,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU604_RS12010;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2264055 2265175 . + . ID=gene-LU604_RS12015;Name=LU604_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12015;old_locus_tag=LU604_12015 NZ_CP089942.1 Protein Homology CDS 2264055 2264313 . + 0 ID=cds-WP_233480639.1;Parent=gene-LU604_RS12015;Dbxref=Genbank:WP_233480639.1;Name=WP_233480639.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS12015;product=IS3 family transposase;protein_id=WP_233480639.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2264313 2265175 . + 2 ID=cds-WP_233480639.1;Parent=gene-LU604_RS12015;Dbxref=Genbank:WP_233480639.1;Name=WP_233480639.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS12015;product=IS3 family transposase;protein_id=WP_233480639.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2265682 2265870 . + . ID=gene-LU604_RS12020;Name=LU604_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12020;old_locus_tag=LU604_12020 NZ_CP089942.1 GeneMarkS-2+ CDS 2265682 2265870 . + 0 ID=cds-WP_152664162.1;Parent=gene-LU604_RS12020;Dbxref=Genbank:WP_152664162.1;Name=WP_152664162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS12020;product=hypothetical protein;protein_id=WP_152664162.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2266018 2266428 . + . ID=gene-LU604_RS12025;Name=LU604_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12025;old_locus_tag=LU604_12025 NZ_CP089942.1 GeneMarkS-2+ CDS 2266018 2266428 . + 0 ID=cds-WP_016169732.1;Parent=gene-LU604_RS12025;Dbxref=Genbank:WP_016169732.1;Name=WP_016169732.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS12025;product=hypothetical protein;protein_id=WP_016169732.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2266460 2266873 . + . ID=gene-LU604_RS12030;Name=LU604_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12030;old_locus_tag=LU604_12030 NZ_CP089942.1 GeneMarkS-2+ CDS 2266460 2266873 . + 0 ID=cds-WP_040465248.1;Parent=gene-LU604_RS12030;Dbxref=Genbank:WP_040465248.1;Name=WP_040465248.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS12030;product=carbohydrate binding domain-containing protein;protein_id=WP_040465248.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2266996 2267532 . - . ID=gene-LU604_RS12035;Name=LU604_RS12035;end_range=2267532,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12035;old_locus_tag=LU604_12035;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2266996 2267532 . - 0 ID=cds-LU604_RS12035;Parent=gene-LU604_RS12035;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2267532,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=LU604_RS12035;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2267729 2268422 . - . ID=gene-LU604_RS12040;Name=LU604_RS12040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12040;old_locus_tag=LU604_12040;pseudo=true NZ_CP089942.1 Protein Homology CDS 2267729 2268422 . - 0 ID=cds-LU604_RS12040;Parent=gene-LU604_RS12040;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001389365.1;locus_tag=LU604_RS12040;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2268658 2268900 . + . ID=gene-LU604_RS12045;Name=LU604_RS12045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12045;old_locus_tag=LU604_12045;partial=true;pseudo=true;start_range=.,2268658 NZ_CP089942.1 Protein Homology CDS 2268658 2268900 . + 0 ID=cds-LU604_RS12045;Parent=gene-LU604_RS12045;Note=fermentative%3B catalyzes the formationof pyruvate from lactate%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210998.1;locus_tag=LU604_RS12045;partial=true;product=2-hydroxyacid dehydrogenase;pseudo=true;start_range=.,2268658;transl_table=11 NZ_CP089942.1 RefSeq gene 2268943 2269215 . - . ID=gene-LU604_RS12050;Name=LU604_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12050;old_locus_tag=LU604_12050 NZ_CP089942.1 Protein Homology CDS 2268943 2269215 . - 0 ID=cds-WP_016169737.1;Parent=gene-LU604_RS12050;Dbxref=Genbank:WP_016169737.1;Name=WP_016169737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003853763.1;locus_tag=LU604_RS12050;product=DUF333 domain-containing protein;protein_id=WP_016169737.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2269565 2269837 . + . ID=gene-LU604_RS12055;Name=LU604_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12055;old_locus_tag=LU604_12055 NZ_CP089942.1 Protein Homology CDS 2269565 2269837 . + 0 ID=cds-WP_016169738.1;Parent=gene-LU604_RS12055;Dbxref=Genbank:WP_016169738.1;Name=WP_016169738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202303.1;locus_tag=LU604_RS12055;product=putative quinol monooxygenase;protein_id=WP_016169738.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2270145 2270312 . + . ID=gene-LU604_RS12060;Name=LU604_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12060;old_locus_tag=LU604_12060 NZ_CP089942.1 GeneMarkS-2+ CDS 2270145 2270312 . + 0 ID=cds-WP_233480640.1;Parent=gene-LU604_RS12060;Dbxref=Genbank:WP_233480640.1;Name=WP_233480640.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS12060;product=hypothetical protein;protein_id=WP_233480640.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2270316 2271524 . + . ID=gene-LU604_RS12065;Name=LU604_RS12065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12065;old_locus_tag=LU604_12065;pseudo=true NZ_CP089942.1 Protein Homology CDS 2270316 2271524 . + 0 ID=cds-LU604_RS12065;Parent=gene-LU604_RS12065;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU604_RS12065;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2271558 2271748 . - . ID=gene-LU604_RS12070;Name=LU604_RS12070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12070;old_locus_tag=LU604_12070;partial=true;pseudo=true;start_range=.,2271558 NZ_CP089942.1 Protein Homology CDS 2271558 2271748 . - 0 ID=cds-LU604_RS12070;Parent=gene-LU604_RS12070;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157581.1;locus_tag=LU604_RS12070;partial=true;product=AraC family transcriptional regulator;pseudo=true;start_range=.,2271558;transl_table=11 NZ_CP089942.1 RefSeq gene 2271872 2272318 . - . ID=gene-LU604_RS12075;Name=LU604_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12075;old_locus_tag=LU604_12075 NZ_CP089942.1 Protein Homology CDS 2271872 2272318 . - 0 ID=cds-WP_016169740.1;Parent=gene-LU604_RS12075;Dbxref=Genbank:WP_016169740.1;Name=WP_016169740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202064.1;locus_tag=LU604_RS12075;product=Rrf2 family transcriptional regulator;protein_id=WP_016169740.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2272583 2273791 . - . ID=gene-LU604_RS12080;Name=LU604_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12080;old_locus_tag=LU604_12080 NZ_CP089942.1 Protein Homology CDS 2272583 2273791 . - 0 ID=cds-WP_233481389.1;Parent=gene-LU604_RS12080;Dbxref=Genbank:WP_233481389.1;Name=WP_233481389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368856.1;locus_tag=LU604_RS12080;product=transposase;protein_id=WP_233481389.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2273815 2274231 . + . ID=gene-LU604_RS12085;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS12085;old_locus_tag=LU604_12085 NZ_CP089942.1 Protein Homology CDS 2273815 2274231 . + 0 ID=cds-WP_233479166.1-2;Parent=gene-LU604_RS12085;Dbxref=Genbank:WP_233479166.1;Name=WP_233479166.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368599.1;locus_tag=LU604_RS12085;product=IS200/IS605 family transposase;protein_id=WP_233479166.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2274452 2274592 . + . ID=gene-LU604_RS12090;Name=LU604_RS12090;end_range=2274592,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12090;old_locus_tag=LU604_12090;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2274452 2274592 . + 0 ID=cds-LU604_RS12090;Parent=gene-LU604_RS12090;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2274592,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105173.1;locus_tag=LU604_RS12090;partial=true;product=sugar transporter;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2274591 2274820 . + . ID=gene-LU604_RS12095;Name=LU604_RS12095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12095;old_locus_tag=LU604_12095;partial=true;pseudo=true;start_range=.,2274591 NZ_CP089942.1 Protein Homology CDS 2274591 2274820 . + 0 ID=cds-LU604_RS12095;Parent=gene-LU604_RS12095;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441436.1;locus_tag=LU604_RS12095;partial=true;product=sugar transporter;pseudo=true;start_range=.,2274591;transl_table=11 NZ_CP089942.1 RefSeq gene 2274886 2275200 . - . ID=gene-LU604_RS12100;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=LU604_RS12100;old_locus_tag=LU604_12100 NZ_CP089942.1 Protein Homology CDS 2274886 2275200 . - 0 ID=cds-WP_233480641.1;Parent=gene-LU604_RS12100;Dbxref=Genbank:WP_233480641.1;Name=WP_233480641.1;Ontology_term=GO:0019301,GO:0016857;gbkey=CDS;gene=rhaM;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133904.1;locus_tag=LU604_RS12100;product=L-rhamnose mutarotase;protein_id=WP_233480641.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2275190 2276032 . - . ID=gene-LU604_RS12105;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=LU604_RS12105;old_locus_tag=LU604_12105 NZ_CP089942.1 Protein Homology CDS 2275190 2276032 . - 0 ID=cds-WP_016169743.1;Parent=gene-LU604_RS12105;Dbxref=Genbank:WP_016169743.1;Name=WP_016169743.1;Ontology_term=GO:0008994;gbkey=CDS;gene=rhaD;go_function=rhamnulose-1-phosphate aldolase activity|0008994||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202058.1;locus_tag=LU604_RS12105;product=rhamnulose-1-phosphate aldolase;protein_id=WP_016169743.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2276042 2277298 . - . ID=gene-LU604_RS12110;Name=LU604_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12110;old_locus_tag=LU604_12110 NZ_CP089942.1 Protein Homology CDS 2276042 2277298 . - 0 ID=cds-WP_016169744.1;Parent=gene-LU604_RS12110;Dbxref=Genbank:WP_016169744.1;Name=WP_016169744.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105828.1;locus_tag=LU604_RS12110;product=L-rhamnose isomerase;protein_id=WP_016169744.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2277295 2278767 . - . ID=gene-LU604_RS12115;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=LU604_RS12115;old_locus_tag=LU604_12115 NZ_CP089942.1 Protein Homology CDS 2277295 2278767 . - 0 ID=cds-WP_016169745.1;Parent=gene-LU604_RS12115;Dbxref=Genbank:WP_016169745.1;Name=WP_016169745.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202056.1;locus_tag=LU604_RS12115;product=rhamnulokinase;protein_id=WP_016169745.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2279068 2279895 . + . ID=gene-LU604_RS12120;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=LU604_RS12120;old_locus_tag=LU604_12120 NZ_CP089942.1 Protein Homology CDS 2279068 2279895 . + 0 ID=cds-WP_016169746.1;Parent=gene-LU604_RS12120;Dbxref=Genbank:WP_016169746.1;Name=WP_016169746.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003853688.1;locus_tag=LU604_RS12120;product=HTH-type transcriptional activator RhaS;protein_id=WP_016169746.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2279904 2280761 . + . ID=gene-LU604_RS12125;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=LU604_RS12125;old_locus_tag=LU604_12125 NZ_CP089942.1 Protein Homology CDS 2279904 2280761 . + 0 ID=cds-WP_233480642.1;Parent=gene-LU604_RS12125;Dbxref=Genbank:WP_233480642.1;Name=WP_233480642.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169747.1;locus_tag=LU604_RS12125;product=HTH-type transcriptional activator RhaR;protein_id=WP_233480642.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2280783 2281031 . - . ID=gene-LU604_RS12130;Name=LU604_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12130;old_locus_tag=LU604_12130 NZ_CP089942.1 Protein Homology CDS 2280783 2281031 . - 0 ID=cds-WP_233480643.1;Parent=gene-LU604_RS12130;Dbxref=Genbank:WP_233480643.1;Name=WP_233480643.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018123.2;locus_tag=LU604_RS12130;product=L-rhamnose/proton symporter RhaT;protein_id=WP_233480643.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2281278 2282945 . - . ID=gene-LU604_RS12135;Name=LU604_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12135;old_locus_tag=LU604_12135 NZ_CP089942.1 Protein Homology CDS 2281278 2282945 . - 0 ID=cds-WP_233480644.1;Parent=gene-LU604_RS12135;Dbxref=Genbank:WP_233480644.1;Name=WP_233480644.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169749.1;locus_tag=LU604_RS12135;product=methyl-accepting chemotaxis protein;protein_id=WP_233480644.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2283337 2284024 . + . ID=gene-LU604_RS12140;Name=LU604_RS12140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12140;old_locus_tag=LU604_12140;pseudo=true NZ_CP089942.1 Protein Homology CDS 2283337 2284024 . + 0 ID=cds-LU604_RS12140;Parent=gene-LU604_RS12140;Note=frameshifted%3B internal stop;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU604_RS12140;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2284138 2285138 . - . ID=gene-LU604_RS12145;Name=LU604_RS12145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12145;old_locus_tag=LU604_12145;pseudo=true NZ_CP089942.1 Protein Homology CDS 2284138 2285138 . - 0 ID=cds-LU604_RS12145;Parent=gene-LU604_RS12145;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315785.1;locus_tag=LU604_RS12145;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2285574 2286326 . + . ID=gene-LU604_RS12150;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=LU604_RS12150;old_locus_tag=LU604_12150 NZ_CP089942.1 Protein Homology CDS 2285574 2286326 . + 0 ID=cds-WP_016169753.1;Parent=gene-LU604_RS12150;Dbxref=Genbank:WP_016169753.1;Name=WP_016169753.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226802.1;locus_tag=LU604_RS12150;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_016169753.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2286386 2286922 . - . ID=gene-LU604_RS26980;Name=LU604_RS26980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26980 NZ_CP089942.1 Protein Homology CDS 2286386 2286922 . - 0 ID=cds-WP_252120240.1;Parent=gene-LU604_RS26980;Dbxref=Genbank:WP_252120240.1;Name=WP_252120240.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020039.2;locus_tag=LU604_RS26980;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_252120240.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2286916 2287413 . - . ID=gene-LU604_RS26985;Name=LU604_RS26985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26985 NZ_CP089942.1 Protein Homology CDS 2286916 2287413 . - 0 ID=cds-WP_252120239.1;Parent=gene-LU604_RS26985;Dbxref=Genbank:WP_252120239.1;Name=WP_252120239.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020039.2;locus_tag=LU604_RS26985;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_252120239.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2287426 2287644 . - . ID=gene-LU604_RS12160;Name=LU604_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12160;old_locus_tag=LU604_12160 NZ_CP089942.1 GeneMarkS-2+ CDS 2287426 2287644 . - 0 ID=cds-WP_152664163.1;Parent=gene-LU604_RS12160;Dbxref=Genbank:WP_152664163.1;Name=WP_152664163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS12160;product=hypothetical protein;protein_id=WP_152664163.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2287970 2288136 . + . ID=gene-LU604_RS12165;Name=LU604_RS12165;end_range=2288136,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12165;old_locus_tag=LU604_12165;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2287970 2288136 . + 0 ID=cds-LU604_RS12165;Parent=gene-LU604_RS12165;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2288136,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_065945178.1;locus_tag=LU604_RS12165;partial=true;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2288358 2288594 . + . ID=gene-LU604_RS12170;Name=LU604_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12170;old_locus_tag=LU604_12170 NZ_CP089942.1 Protein Homology CDS 2288358 2288594 . + 0 ID=cds-WP_016169756.1;Parent=gene-LU604_RS12170;Dbxref=Genbank:WP_016169756.1;Name=WP_016169756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088781.1;locus_tag=LU604_RS12170;product=hypothetical protein;protein_id=WP_016169756.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2288563 2289348 . - . ID=gene-LU604_RS12175;Name=LU604_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12175;old_locus_tag=LU604_12175 NZ_CP089942.1 Protein Homology CDS 2288563 2289348 . - 0 ID=cds-WP_233481629.1;Parent=gene-LU604_RS12175;Dbxref=Genbank:WP_233481629.1;Name=WP_233481629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192697.1;locus_tag=LU604_RS12175;product=DNA adenine methylase;protein_id=WP_233481629.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2289551 2289907 . + . ID=gene-LU604_RS12180;Name=LU604_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12180;old_locus_tag=LU604_12180 NZ_CP089942.1 GeneMarkS-2+ CDS 2289551 2289907 . + 0 ID=cds-WP_016169758.1;Parent=gene-LU604_RS12180;Dbxref=Genbank:WP_016169758.1;Name=WP_016169758.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS12180;product=acyltransferase;protein_id=WP_016169758.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2290131 2290283 . - . ID=gene-LU604_RS12185;Name=LU604_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12185;old_locus_tag=LU604_12185 NZ_CP089942.1 Protein Homology CDS 2290131 2290283 . - 0 ID=cds-WP_016169759.1;Parent=gene-LU604_RS12185;Dbxref=Genbank:WP_016169759.1;Name=WP_016169759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192699.1;locus_tag=LU604_RS12185;product=DUF1378 family protein;protein_id=WP_016169759.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2290344 2290916 . - . ID=gene-LU604_RS12190;Name=LU604_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12190;old_locus_tag=LU604_12190 NZ_CP089942.1 Protein Homology CDS 2290344 2290916 . - 0 ID=cds-WP_040465250.1;Parent=gene-LU604_RS12190;Dbxref=Genbank:WP_040465250.1;Name=WP_040465250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192701.1;locus_tag=LU604_RS12190;product=tail fiber assembly protein;protein_id=WP_040465250.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2290913 2291565 . - . ID=gene-LU604_RS12195;Name=LU604_RS12195;end_range=2291565,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12195;old_locus_tag=LU604_12195;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2290913 2291565 . - 0 ID=cds-LU604_RS12195;Parent=gene-LU604_RS12195;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2291565,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531541.1;locus_tag=LU604_RS12195;partial=true;product=phage tail protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2291798 2293177 . + . ID=gene-LU604_RS12200;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=LU604_RS12200;old_locus_tag=LU604_12200 NZ_CP089942.1 Protein Homology CDS 2291798 2293177 . + 0 ID=cds-WP_233480646.1;Parent=gene-LU604_RS12200;Dbxref=Genbank:WP_233480646.1;Name=WP_233480646.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456479.1;locus_tag=LU604_RS12200;product=IS21 family transposase;protein_id=WP_233480646.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2293181 2293786 . + . ID=gene-LU604_RS12205;Name=istB;gbkey=Gene;gene=istB;gene_biotype=pseudogene;locus_tag=LU604_RS12205;old_locus_tag=LU604_12205;partial=true;pseudo=true;start_range=.,2293181 NZ_CP089942.1 Protein Homology CDS 2293181 2293786 . + 0 ID=cds-LU604_RS12205;Parent=gene-LU604_RS12205;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;gbkey=CDS;gene=istB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802959.1;locus_tag=LU604_RS12205;partial=true;product=IS21-like element helper ATPase IstB;pseudo=true;start_range=.,2293181;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2293974 2295008 . - . ID=gene-LU604_RS12210;Name=LU604_RS12210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12210;old_locus_tag=LU604_12210;pseudo=true NZ_CP089942.1 Protein Homology CDS 2293974 2295008 . - 0 ID=cds-LU604_RS12210;Parent=gene-LU604_RS12210;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS12210;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2295092 2295367 . - . ID=gene-LU604_RS12215;Name=LU604_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12215;old_locus_tag=LU604_12215 NZ_CP089942.1 GeneMarkS-2+ CDS 2295092 2295367 . - 0 ID=cds-WP_233480647.1;Parent=gene-LU604_RS12215;Dbxref=Genbank:WP_233480647.1;Name=WP_233480647.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS12215;product=hypothetical protein;protein_id=WP_233480647.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2295367 2295948 . - . ID=gene-LU604_RS12220;Name=LU604_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12220;old_locus_tag=LU604_12220 NZ_CP089942.1 Protein Homology CDS 2295367 2295948 . - 0 ID=cds-WP_233480648.1;Parent=gene-LU604_RS12220;Dbxref=Genbank:WP_233480648.1;Name=WP_233480648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192703.1;locus_tag=LU604_RS12220;product=DUF2313 domain-containing protein;protein_id=WP_233480648.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2295945 2297363 . - . ID=gene-LU604_RS12225;Name=LU604_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12225;old_locus_tag=LU604_12225 NZ_CP089942.1 Protein Homology CDS 2295945 2297363 . - 0 ID=cds-WP_233480649.1;Parent=gene-LU604_RS12225;Dbxref=Genbank:WP_233480649.1;Name=WP_233480649.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021648.2;locus_tag=LU604_RS12225;product=phage tail tape measure protein;protein_id=WP_233480649.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2297323 2298144 . - . ID=gene-LU604_RS12230;Name=LU604_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12230;old_locus_tag=LU604_12230 NZ_CP089942.1 Protein Homology CDS 2297323 2298144 . - 0 ID=cds-WP_233480650.1;Parent=gene-LU604_RS12230;Dbxref=Genbank:WP_233480650.1;Name=WP_233480650.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017850.2;locus_tag=LU604_RS12230;product=DUF935 family protein;protein_id=WP_233480650.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2298145 2299833 . - . ID=gene-LU604_RS12235;Name=terL;gbkey=Gene;gene=terL;gene_biotype=protein_coding;locus_tag=LU604_RS12235;old_locus_tag=LU604_12235 NZ_CP089942.1 Protein Homology CDS 2298145 2299833 . - 0 ID=cds-WP_233480651.1;Parent=gene-LU604_RS12235;Dbxref=Genbank:WP_233480651.1;Name=WP_233480651.1;gbkey=CDS;gene=terL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088847.1;locus_tag=LU604_RS12235;product=phage terminase large subunit;protein_id=WP_233480651.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2299844 2300074 . - . ID=gene-LU604_RS12240;Name=LU604_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12240;old_locus_tag=LU604_12240 NZ_CP089942.1 Protein Homology CDS 2299844 2300074 . - 0 ID=cds-WP_233480652.1;Parent=gene-LU604_RS12240;Dbxref=Genbank:WP_233480652.1;Name=WP_233480652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169768.1;locus_tag=LU604_RS12240;product=hypothetical protein;protein_id=WP_233480652.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2300067 2300588 . - . ID=gene-LU604_RS12245;Name=LU604_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12245;old_locus_tag=LU604_12245 NZ_CP089942.1 Protein Homology CDS 2300067 2300588 . - 0 ID=cds-WP_233480653.1;Parent=gene-LU604_RS12245;Dbxref=Genbank:WP_233480653.1;Name=WP_233480653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088853.1;locus_tag=LU604_RS12245;product=DUF1804 family protein;protein_id=WP_233480653.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2300588 2300836 . - . ID=gene-LU604_RS12250;Name=LU604_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12250;old_locus_tag=LU604_12250 NZ_CP089942.1 Protein Homology CDS 2300588 2300836 . - 0 ID=cds-WP_233480654.1;Parent=gene-LU604_RS12250;Dbxref=Genbank:WP_233480654.1;Name=WP_233480654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169770.1;locus_tag=LU604_RS12250;product=hypothetical protein;protein_id=WP_233480654.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2300855 2301082 . - . ID=gene-LU604_RS12255;Name=LU604_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12255;old_locus_tag=LU604_12255 NZ_CP089942.1 Protein Homology CDS 2300855 2301082 . - 0 ID=cds-WP_233480655.1;Parent=gene-LU604_RS12255;Dbxref=Genbank:WP_233480655.1;Name=WP_233480655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118109.1;locus_tag=LU604_RS12255;product=hypothetical protein;protein_id=WP_233480655.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2301045 2301521 . - . ID=gene-LU604_RS12260;Name=LU604_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12260;old_locus_tag=LU604_12260 NZ_CP089942.1 Protein Homology CDS 2301045 2301521 . - 0 ID=cds-WP_233480656.1;Parent=gene-LU604_RS12260;Dbxref=Genbank:WP_233480656.1;Name=WP_233480656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169771.1;locus_tag=LU604_RS12260;product=hypothetical protein;protein_id=WP_233480656.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2301499 2301750 . - . ID=gene-LU604_RS12265;Name=LU604_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12265;old_locus_tag=LU604_12265 NZ_CP089942.1 Protein Homology CDS 2301499 2301750 . - 0 ID=cds-WP_232426794.1;Parent=gene-LU604_RS12265;Dbxref=Genbank:WP_232426794.1;Name=WP_232426794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088864.1;locus_tag=LU604_RS12265;product=DUF2644 domain-containing protein;protein_id=WP_232426794.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2301768 2302223 . - . ID=gene-LU604_RS12270;Name=LU604_RS12270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12270;old_locus_tag=LU604_12270;pseudo=true NZ_CP089942.1 Protein Homology CDS 2301768 2302223 . - 0 ID=cds-LU604_RS12270;Parent=gene-LU604_RS12270;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169773.1;locus_tag=LU604_RS12270;product=lysozyme;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2302307 2302756 . - . ID=gene-LU604_RS12275;Name=LU604_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12275;old_locus_tag=LU604_12275 NZ_CP089942.1 Protein Homology CDS 2302307 2302756 . - 0 ID=cds-WP_016169774.1;Parent=gene-LU604_RS12275;Dbxref=Genbank:WP_016169774.1;Name=WP_016169774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192728.1;locus_tag=LU604_RS12275;product=hypothetical protein;protein_id=WP_016169774.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2302756 2303151 . - . ID=gene-LU604_RS12280;Name=LU604_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12280;old_locus_tag=LU604_12280 NZ_CP089942.1 Protein Homology CDS 2302756 2303151 . - 0 ID=cds-WP_233480658.1;Parent=gene-LU604_RS12280;Dbxref=Genbank:WP_233480658.1;Name=WP_233480658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192729.1;locus_tag=LU604_RS12280;product=regulatory protein GemA;protein_id=WP_233480658.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2303396 2303922 . + . ID=gene-LU604_RS12285;Name=LU604_RS12285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12285;old_locus_tag=LU604_12285;pseudo=true NZ_CP089942.1 Protein Homology CDS 2303396 2303922 . + 0 ID=cds-LU604_RS12285;Parent=gene-LU604_RS12285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768502.1;locus_tag=LU604_RS12285;product=DUF2778 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2304065 2304523 . - . ID=gene-LU604_RS12290;Name=LU604_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12290;old_locus_tag=LU604_12290 NZ_CP089942.1 Protein Homology CDS 2304065 2304523 . - 0 ID=cds-WP_233480659.1;Parent=gene-LU604_RS12290;Dbxref=Genbank:WP_233480659.1;Name=WP_233480659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088884.1;locus_tag=LU604_RS12290;product=DUF4406 domain-containing protein;protein_id=WP_233480659.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2304520 2304738 . - . ID=gene-LU604_RS12295;Name=LU604_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12295;old_locus_tag=LU604_12295 NZ_CP089942.1 Protein Homology CDS 2304520 2304738 . - 0 ID=cds-WP_233480660.1;Parent=gene-LU604_RS12295;Dbxref=Genbank:WP_233480660.1;Name=WP_233480660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006709448.1;locus_tag=LU604_RS12295;product=hypothetical protein;protein_id=WP_233480660.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2304957 2305439 . - . ID=gene-LU604_RS12300;Name=LU604_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12300;old_locus_tag=LU604_12300 NZ_CP089942.1 Protein Homology CDS 2304957 2305439 . - 0 ID=cds-WP_233480661.1;Parent=gene-LU604_RS12300;Dbxref=Genbank:WP_233480661.1;Name=WP_233480661.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022432.2;locus_tag=LU604_RS12300;product=DUF2786 domain-containing protein;protein_id=WP_233480661.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2305442 2305663 . - . ID=gene-LU604_RS12305;Name=LU604_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12305;old_locus_tag=LU604_12305 NZ_CP089942.1 GeneMarkS-2+ CDS 2305442 2305663 . - 0 ID=cds-WP_233480662.1;Parent=gene-LU604_RS12305;Dbxref=Genbank:WP_233480662.1;Name=WP_233480662.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS12305;product=hypothetical protein;protein_id=WP_233480662.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2305741 2305932 . - . ID=gene-LU604_RS12310;Name=LU604_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12310;old_locus_tag=LU604_12310 NZ_CP089942.1 Protein Homology CDS 2305741 2305932 . - 0 ID=cds-WP_046372181.1;Parent=gene-LU604_RS12310;Dbxref=Genbank:WP_046372181.1;Name=WP_046372181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644728.1;locus_tag=LU604_RS12310;product=hypothetical protein;protein_id=WP_046372181.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2305913 2306146 . - . ID=gene-LU604_RS12315;Name=LU604_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12315;old_locus_tag=LU604_12315 NZ_CP089942.1 Protein Homology CDS 2305913 2306146 . - 0 ID=cds-WP_046372180.1;Parent=gene-LU604_RS12315;Dbxref=Genbank:WP_046372180.1;Name=WP_046372180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553850.1;locus_tag=LU604_RS12315;product=ANR family transcriptional regulator;protein_id=WP_046372180.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2306148 2306348 . - . ID=gene-LU604_RS12320;Name=LU604_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12320;old_locus_tag=LU604_12320 NZ_CP089942.1 Protein Homology CDS 2306148 2306348 . - 0 ID=cds-WP_233480663.1;Parent=gene-LU604_RS12320;Dbxref=Genbank:WP_233480663.1;Name=WP_233480663.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022807.2;locus_tag=LU604_RS12320;product=DUF3164 family protein;protein_id=WP_233480663.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2306327 2306650 . - . ID=gene-LU604_RS12325;Name=LU604_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12325;old_locus_tag=LU604_12325 NZ_CP089942.1 GeneMarkS-2+ CDS 2306327 2306650 . - 0 ID=cds-WP_233480664.1;Parent=gene-LU604_RS12325;Dbxref=Genbank:WP_233480664.1;Name=WP_233480664.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS12325;product=hypothetical protein;protein_id=WP_233480664.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2306765 2307462 . + . ID=gene-LU604_RS12330;Name=LU604_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12330;old_locus_tag=LU604_12330 NZ_CP089942.1 Protein Homology CDS 2306765 2307014 . + 0 ID=cds-WP_233481642.1;Parent=gene-LU604_RS12330;Dbxref=Genbank:WP_233481642.1;Name=WP_233481642.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS12330;product=IS1 family transposase;protein_id=WP_233481642.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2307014 2307462 . + 2 ID=cds-WP_233481642.1;Parent=gene-LU604_RS12330;Dbxref=Genbank:WP_233481642.1;Name=WP_233481642.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS12330;product=IS1 family transposase;protein_id=WP_233481642.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2308073 2309803 . - . ID=gene-LU604_RS12335;Name=LU604_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12335;old_locus_tag=LU604_12335 NZ_CP089942.1 Protein Homology CDS 2308073 2309803 . - 0 ID=cds-WP_233480665.1;Parent=gene-LU604_RS12335;Dbxref=Genbank:WP_233480665.1;Name=WP_233480665.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF013714.2;locus_tag=LU604_RS12335;product=FAD-binding protein;protein_id=WP_233480665.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2309970 2310734 . - . ID=gene-LU604_RS12340;Name=LU604_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12340;old_locus_tag=LU604_12340 NZ_CP089942.1 Protein Homology CDS 2309970 2310734 . - 0 ID=cds-WP_233480788.1;Parent=gene-LU604_RS12340;Dbxref=Genbank:WP_233480788.1;Name=WP_233480788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003114198.1;locus_tag=LU604_RS12340;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_233480788.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2310960 2311895 . - . ID=gene-LU604_RS12345;Name=LU604_RS12345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12345;old_locus_tag=LU604_12345;partial=true;pseudo=true;start_range=.,2310960 NZ_CP089942.1 Protein Homology CDS 2310960 2311895 . - 0 ID=cds-LU604_RS12345;Parent=gene-LU604_RS12345;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014675.2;locus_tag=LU604_RS12345;partial=true;product=family 10 glycosylhydrolase;pseudo=true;start_range=.,2310960;transl_table=11 NZ_CP089942.1 RefSeq gene 2312703 2313400 . + . ID=gene-LU604_RS12350;Name=LU604_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12350;old_locus_tag=LU604_12350 NZ_CP089942.1 Protein Homology CDS 2312703 2312952 . + 0 ID=cds-WP_233480666.1;Parent=gene-LU604_RS12350;Dbxref=Genbank:WP_233480666.1;Name=WP_233480666.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS12350;product=IS1 family transposase;protein_id=WP_233480666.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2312952 2313400 . + 2 ID=cds-WP_233480666.1;Parent=gene-LU604_RS12350;Dbxref=Genbank:WP_233480666.1;Name=WP_233480666.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS12350;product=IS1 family transposase;protein_id=WP_233480666.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2313507 2313790 . - . ID=gene-LU604_RS12355;Name=LU604_RS12355;end_range=2313790,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12355;old_locus_tag=LU604_12355;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2313507 2313790 . - 0 ID=cds-LU604_RS12355;Parent=gene-LU604_RS12355;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2313790,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799524.1;locus_tag=LU604_RS12355;partial=true;product=alcohol dehydrogenase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2313825 2313938 . - . ID=gene-LU604_RS12360;Name=LU604_RS12360;end_range=2313938,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12360;old_locus_tag=LU604_12360;partial=true;pseudo=true;start_range=.,2313825 NZ_CP089942.1 Protein Homology CDS 2313825 2313938 . - 0 ID=cds-LU604_RS12360;Parent=gene-LU604_RS12360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2313938,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007921764.1;locus_tag=LU604_RS12360;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,2313825;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2313983 2314283 . - . ID=gene-LU604_RS12365;Name=LU604_RS12365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12365;old_locus_tag=LU604_12365;partial=true;pseudo=true;start_range=.,2313983 NZ_CP089942.1 Protein Homology CDS 2313983 2314283 . - 0 ID=cds-LU604_RS12365;Parent=gene-LU604_RS12365;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799524.1;locus_tag=LU604_RS12365;partial=true;product=alcohol dehydrogenase catalytic domain-containing protein;pseudo=true;start_range=.,2313983;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2314371 2315621 . - . ID=gene-LU604_RS12370;Name=LU604_RS12370;end_range=2315621,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12370;old_locus_tag=LU604_12370;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2314371 2315621 . - 0 ID=cds-LU604_RS12370;Parent=gene-LU604_RS12370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2315621,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007893169.1;locus_tag=LU604_RS12370;partial=true;product=PAS domain-containing methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2316370 2317758 . + . ID=gene-LU604_RS12375;Name=LU604_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12375;old_locus_tag=LU604_12375 NZ_CP089942.1 Protein Homology CDS 2316370 2317758 . + 0 ID=cds-WP_233480667.1;Parent=gene-LU604_RS12375;Dbxref=Genbank:WP_233480667.1;Name=WP_233480667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005968504.1;locus_tag=LU604_RS12375;product=SrfA family protein;protein_id=WP_233480667.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2317761 2320742 . + . ID=gene-LU604_RS12380;Name=LU604_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12380;old_locus_tag=LU604_12380 NZ_CP089942.1 Protein Homology CDS 2317761 2320742 . + 0 ID=cds-WP_233480668.1;Parent=gene-LU604_RS12380;Dbxref=Genbank:WP_233480668.1;Name=WP_233480668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011093775.1;locus_tag=LU604_RS12380;product=virulence factor SrfB;protein_id=WP_233480668.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2320739 2323129 . + . ID=gene-LU604_RS12385;Name=LU604_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12385;old_locus_tag=LU604_12385 NZ_CP089942.1 Protein Homology CDS 2320739 2323129 . + 0 ID=cds-WP_233480669.1;Parent=gene-LU604_RS12385;Dbxref=Genbank:WP_233480669.1;Name=WP_233480669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202117.1;locus_tag=LU604_RS12385;product=virulence factor SrfC family protein;protein_id=WP_233480669.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2323588 2324973 . + . ID=gene-LU604_RS12390;Name=LU604_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12390;old_locus_tag=LU604_12390 NZ_CP089942.1 Protein Homology CDS 2323588 2324973 . + 0 ID=cds-WP_233480670.1;Parent=gene-LU604_RS12390;Dbxref=Genbank:WP_233480670.1;Name=WP_233480670.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014416667.1;locus_tag=LU604_RS12390;product=diaminobutyrate--2-oxoglutarate transaminase;protein_id=WP_233480670.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2324988 2326478 . + . ID=gene-LU604_RS12395;Name=LU604_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12395;old_locus_tag=LU604_12395 NZ_CP089942.1 Protein Homology CDS 2324988 2326478 . + 0 ID=cds-WP_233480671.1;Parent=gene-LU604_RS12395;Dbxref=Genbank:WP_233480671.1;Name=WP_233480671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168359.1;locus_tag=LU604_RS12395;product=aspartate aminotransferase family protein;protein_id=WP_233480671.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2327138 2328460 . + . ID=gene-LU604_RS12400;Name=LU604_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12400;old_locus_tag=LU604_12400 NZ_CP089942.1 Protein Homology CDS 2327138 2328460 . + 0 ID=cds-WP_233481630.1;Parent=gene-LU604_RS12400;Dbxref=Genbank:WP_233481630.1;Name=WP_233481630.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU604_RS12400;product=IS4 family transposase;protein_id=WP_233481630.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2328470 2329555 . - . ID=gene-LU604_RS12405;Name=LU604_RS12405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12405;old_locus_tag=LU604_12405;partial=true;pseudo=true;start_range=.,2328470 NZ_CP089942.1 Protein Homology CDS 2328470 2329555 . - 0 ID=cds-LU604_RS12405;Parent=gene-LU604_RS12405;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611429.1;locus_tag=LU604_RS12405;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,2328470;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2329877 2330014 . - . ID=gene-LU604_RS12410;Name=LU604_RS12410;end_range=2330014,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12410;old_locus_tag=LU604_12410;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2329877 2330014 . - 0 ID=cds-LU604_RS12410;Parent=gene-LU604_RS12410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2330014,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=LU604_RS12410;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2330059 2331267 . - . ID=gene-LU604_RS12415;Name=LU604_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12415;old_locus_tag=LU604_12415 NZ_CP089942.1 Protein Homology CDS 2330059 2331267 . - 0 ID=cds-WP_233479028.1;Parent=gene-LU604_RS12415;Dbxref=Genbank:WP_233479028.1;Name=WP_233479028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368856.1;locus_tag=LU604_RS12415;product=transposase;protein_id=WP_233479028.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2331291 2331707 . + . ID=gene-LU604_RS12420;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS12420;old_locus_tag=LU604_12420 NZ_CP089942.1 Protein Homology CDS 2331291 2331707 . + 0 ID=cds-WP_233479166.1-3;Parent=gene-LU604_RS12420;Dbxref=Genbank:WP_233479166.1;Name=WP_233479166.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368599.1;locus_tag=LU604_RS12420;product=IS200/IS605 family transposase;protein_id=WP_233479166.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2332047 2333426 . - . ID=gene-LU604_RS12425;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=LU604_RS12425;old_locus_tag=LU604_12425 NZ_CP089942.1 Protein Homology CDS 2332047 2333426 . - 0 ID=cds-WP_233480672.1;Parent=gene-LU604_RS12425;Dbxref=Genbank:WP_233480672.1;Name=WP_233480672.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157661.1;locus_tag=LU604_RS12425;product=ATP-dependent RNA helicase DbpA;protein_id=WP_233480672.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2334013 2334850 . + . ID=gene-LU604_RS12430;Name=LU604_RS12430;end_range=2334850,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12430;old_locus_tag=LU604_12430;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2334013 2334850 . + 0 ID=cds-LU604_RS12430;Parent=gene-LU604_RS12430;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2334850,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558155.1;locus_tag=LU604_RS12430;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2335198 2336238 . + . ID=gene-LU604_RS12435;Name=LU604_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12435;old_locus_tag=LU604_12435 NZ_CP089942.1 Protein Homology CDS 2335198 2336238 . + 0 ID=cds-WP_233478553.1-14;Parent=gene-LU604_RS12435;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS12435;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2336298 2337017 . - . ID=gene-LU604_RS12440;Name=LU604_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12440;old_locus_tag=LU604_12440 NZ_CP089942.1 Protein Homology CDS 2336298 2337017 . - 0 ID=cds-WP_233480673.1;Parent=gene-LU604_RS12440;Dbxref=Genbank:WP_233480673.1;Name=WP_233480673.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013873.2;locus_tag=LU604_RS12440;product=isopentenyl transferase family protein;protein_id=WP_233480673.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2337122 2337837 . + . ID=gene-LU604_RS12445;Name=LU604_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12445;old_locus_tag=LU604_12445 NZ_CP089942.1 Protein Homology CDS 2337122 2337380 . + 0 ID=cds-WP_233481631.1;Parent=gene-LU604_RS12445;Dbxref=Genbank:WP_233481631.1;Name=WP_233481631.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU604_RS12445;product=IS1 family transposase;protein_id=WP_233481631.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2337380 2337837 . + 2 ID=cds-WP_233481631.1;Parent=gene-LU604_RS12445;Dbxref=Genbank:WP_233481631.1;Name=WP_233481631.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU604_RS12445;product=IS1 family transposase;protein_id=WP_233481631.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2338078 2340630 . - . ID=gene-LU604_RS12450;Name=LU604_RS12450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12450;old_locus_tag=LU604_12450;partial=true;pseudo=true;start_range=.,2338078 NZ_CP089942.1 Protein Homology CDS 2338078 2340630 . - 0 ID=cds-LU604_RS12450;Parent=gene-LU604_RS12450;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010799689.1;locus_tag=LU604_RS12450;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,2338078;transl_table=11 NZ_CP089942.1 RefSeq gene 2340779 2341249 . + . ID=gene-LU604_RS12455;Name=LU604_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12455;old_locus_tag=LU604_12455 NZ_CP089942.1 Protein Homology CDS 2340779 2341249 . + 0 ID=cds-WP_233480675.1;Parent=gene-LU604_RS12455;Dbxref=Genbank:WP_233480675.1;Name=WP_233480675.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012464.2;locus_tag=LU604_RS12455;product=recombinase family protein;protein_id=WP_233480675.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2341370 2341560 . + . ID=gene-LU604_RS12460;Name=LU604_RS12460;end_range=2341560,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12460;old_locus_tag=LU604_12460;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2341370 2341560 . + 0 ID=cds-LU604_RS12460;Parent=gene-LU604_RS12460;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2341560,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211573.1;locus_tag=LU604_RS12460;partial=true;product=type VI secretion system tube protein Hcp;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2341678 2341851 . + . ID=gene-LU604_RS12465;Name=LU604_RS12465;end_range=2341851,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12465;old_locus_tag=LU604_12465;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2341678 2341851 . + 0 ID=cds-LU604_RS12465;Parent=gene-LU604_RS12465;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2341851,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707455.1;locus_tag=LU604_RS12465;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2341875 2342871 . + . ID=gene-LU604_RS12470;Name=LU604_RS12470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12470;old_locus_tag=LU604_12470;pseudo=true NZ_CP089942.1 Protein Homology CDS 2341875 2342871 . + 0 ID=cds-LU604_RS12470;Parent=gene-LU604_RS12470;Note=frameshifted%3B internal stop;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS12470;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2342954 2343508 . - . ID=gene-LU604_RS12475;Name=LU604_RS12475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12475;old_locus_tag=LU604_12475;partial=true;pseudo=true;start_range=.,2342954 NZ_CP089942.1 Protein Homology CDS 2342954 2343508 . - 0 ID=cds-LU604_RS12475;Parent=gene-LU604_RS12475;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU604_RS12475;partial=true;product=transposase;pseudo=true;start_range=.,2342954;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2343622 2344759 . - . ID=gene-LU604_RS12480;Name=LU604_RS12480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12480;old_locus_tag=LU604_12480;partial=true;pseudo=true;start_range=.,2343622 NZ_CP089942.1 Protein Homology CDS 2343622 2344759 . - 0 ID=cds-LU604_RS12480;Parent=gene-LU604_RS12480;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343760.1;locus_tag=LU604_RS12480;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,2343622;transl_table=11 NZ_CP089942.1 RefSeq gene 2344836 2345219 . - . ID=gene-LU604_RS12485;Name=LU604_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12485;old_locus_tag=LU604_12485 NZ_CP089942.1 Protein Homology CDS 2344836 2345219 . - 0 ID=cds-WP_233480676.1;Parent=gene-LU604_RS12485;Dbxref=Genbank:WP_233480676.1;Name=WP_233480676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010257071.1;locus_tag=LU604_RS12485;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_233480676.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2345279 2346012 . - . ID=gene-LU604_RS12490;Name=araD;gbkey=Gene;gene=araD;gene_biotype=pseudogene;locus_tag=LU604_RS12490;old_locus_tag=LU604_12490;pseudo=true NZ_CP089942.1 Protein Homology CDS 2345279 2346012 . - 0 ID=cds-LU604_RS12490;Parent=gene-LU604_RS12490;Note=frameshifted%3B internal stop;gbkey=CDS;gene=araD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105140.1;locus_tag=LU604_RS12490;product=L-ribulose-5-phosphate 4-epimerase AraD;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2346323 2346541 . + . ID=gene-LU604_RS12495;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=LU604_RS12495;old_locus_tag=LU604_12495 NZ_CP089942.1 Protein Homology CDS 2346323 2346541 . + 0 ID=cds-WP_233480677.1;Parent=gene-LU604_RS12495;Dbxref=Genbank:WP_233480677.1;Name=WP_233480677.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020583.1;locus_tag=LU604_RS12495;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_233480677.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2346609 2346869 . + . ID=gene-LU604_RS12500;Name=LU604_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12500;old_locus_tag=LU604_12500 NZ_CP089942.1 GeneMarkS-2+ CDS 2346609 2346869 . + 0 ID=cds-WP_233481632.1;Parent=gene-LU604_RS12500;Dbxref=Genbank:WP_233481632.1;Name=WP_233481632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS12500;product=hypothetical protein;protein_id=WP_233481632.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2347294 2348501 . + . ID=gene-LU604_RS12505;Name=LU604_RS12505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12505;old_locus_tag=LU604_12505;pseudo=true NZ_CP089942.1 Protein Homology CDS 2347294 2348501 . + 0 ID=cds-LU604_RS12505;Parent=gene-LU604_RS12505;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS12505;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2348527 2348931 . - . ID=gene-LU604_RS12510;Name=LU604_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12510;old_locus_tag=LU604_12510 NZ_CP089942.1 GeneMarkS-2+ CDS 2348527 2348931 . - 0 ID=cds-WP_233480678.1;Parent=gene-LU604_RS12510;Dbxref=Genbank:WP_233480678.1;Name=WP_233480678.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS12510;product=hypothetical protein;protein_id=WP_233480678.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2349636 2349764 . + . ID=gene-LU604_RS26990;Name=LU604_RS26990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26990 NZ_CP089942.1 GeneMarkS-2+ CDS 2349636 2349764 . + 0 ID=cds-WP_016169778.1;Parent=gene-LU604_RS26990;Dbxref=Genbank:WP_016169778.1;Name=WP_016169778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26990;product=hypothetical protein;protein_id=WP_016169778.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2349972 2350418 . + . ID=gene-LU604_RS12515;Name=LU604_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12515;old_locus_tag=LU604_12515 NZ_CP089942.1 GeneMarkS-2+ CDS 2349972 2350418 . + 0 ID=cds-WP_233480679.1;Parent=gene-LU604_RS12515;Dbxref=Genbank:WP_233480679.1;Name=WP_233480679.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS12515;product=hypothetical protein;protein_id=WP_233480679.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2350744 2351169 . - . ID=gene-LU604_RS12520;Name=LU604_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12520;old_locus_tag=LU604_12520 NZ_CP089942.1 Protein Homology CDS 2350744 2351169 . - 0 ID=cds-WP_233480680.1;Parent=gene-LU604_RS12520;Dbxref=Genbank:WP_233480680.1;Name=WP_233480680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169781.1;locus_tag=LU604_RS12520;product=hypothetical protein;protein_id=WP_233480680.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2351181 2351468 . - . ID=gene-LU604_RS12525;Name=LU604_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12525;old_locus_tag=LU604_12525 NZ_CP089942.1 GeneMarkS-2+ CDS 2351181 2351468 . - 0 ID=cds-WP_233481633.1;Parent=gene-LU604_RS12525;Dbxref=Genbank:WP_233481633.1;Name=WP_233481633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS12525;product=hypothetical protein;protein_id=WP_233481633.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2351507 2351854 . - . ID=gene-LU604_RS12530;Name=LU604_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12530;old_locus_tag=LU604_12530 NZ_CP089942.1 GeneMarkS-2+ CDS 2351507 2351854 . - 0 ID=cds-WP_233480682.1;Parent=gene-LU604_RS12530;Dbxref=Genbank:WP_233480682.1;Name=WP_233480682.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS12530;product=hypothetical protein;protein_id=WP_233480682.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2352173 2352742 . - . ID=gene-LU604_RS12535;Name=LU604_RS12535;end_range=2352742,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12535;old_locus_tag=LU604_12535;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2352173 2352742 . - 0 ID=cds-LU604_RS12535;Parent=gene-LU604_RS12535;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2352742,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001388363.1;locus_tag=LU604_RS12535;partial=true;product=type II secretion system protein GspD;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2352887 2354110 . - . ID=gene-LU604_RS12540;Name=LU604_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12540;old_locus_tag=LU604_12540 NZ_CP089942.1 Protein Homology CDS 2352887 2354110 . - 0 ID=cds-WP_233481634.1;Parent=gene-LU604_RS12540;Dbxref=Genbank:WP_233481634.1;Name=WP_233481634.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU604_RS12540;product=IS91 family transposase;protein_id=WP_233481634.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2354142 2354802 . - . ID=gene-LU604_RS12545;Name=LU604_RS12545;end_range=2354802,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12545;old_locus_tag=LU604_12545;partial=true;pseudo=true;start_range=.,2354142 NZ_CP089942.1 Protein Homology CDS 2354142 2354802 . - 0 ID=cds-LU604_RS12545;Parent=gene-LU604_RS12545;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2354802,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001388363.1;locus_tag=LU604_RS12545;partial=true;product=type II secretion system protein GspD;pseudo=true;start_range=.,2354142;transl_table=11 NZ_CP089942.1 RefSeq gene 2354795 2355001 . + . ID=gene-LU604_RS12550;Name=LU604_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12550;old_locus_tag=LU604_12550 NZ_CP089942.1 GeneMarkS-2+ CDS 2354795 2355001 . + 0 ID=cds-WP_040465252.1;Parent=gene-LU604_RS12550;Dbxref=Genbank:WP_040465252.1;Name=WP_040465252.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS12550;product=hypothetical protein;protein_id=WP_040465252.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2355241 2356404 . - . ID=gene-LU604_RS12555;Name=LU604_RS12555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12555;old_locus_tag=LU604_12555;pseudo=true NZ_CP089942.1 Protein Homology CDS 2355241 2356404 . - 0 ID=cds-LU604_RS12555;Parent=gene-LU604_RS12555;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611429.1;locus_tag=LU604_RS12555;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2357098 2357616 . + . ID=gene-LU604_RS12560;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=LU604_RS12560;old_locus_tag=LU604_12560 NZ_CP089942.1 Protein Homology CDS 2357098 2357616 . + 0 ID=cds-WP_046371883.1;Parent=gene-LU604_RS12560;Dbxref=Genbank:WP_046371883.1;Name=WP_046371883.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003850273.1;locus_tag=LU604_RS12560;product=superoxide dismutase family protein;protein_id=WP_046371883.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2357607 2357732 . + . ID=gene-LU604_RS12565;Name=LU604_RS12565;end_range=2357732,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12565;old_locus_tag=LU604_12565;partial=true;pseudo=true;start_range=.,2357607 NZ_CP089942.1 Protein Homology CDS 2357607 2357732 . + 0 ID=cds-LU604_RS12565;Parent=gene-LU604_RS12565;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2357732,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011920327.1;locus_tag=LU604_RS12565;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,2357607;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2357833 2359040 . - . ID=gene-LU604_RS12570;Name=LU604_RS12570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12570;old_locus_tag=LU604_12570;pseudo=true NZ_CP089942.1 Protein Homology CDS 2357833 2359040 . - 0 ID=cds-LU604_RS12570;Parent=gene-LU604_RS12570;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF013068.2;locus_tag=LU604_RS12570;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2359044 2359211 . - . ID=gene-LU604_RS12575;Name=LU604_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12575;old_locus_tag=LU604_12575 NZ_CP089942.1 GeneMarkS-2+ CDS 2359044 2359211 . - 0 ID=cds-WP_233480640.1-2;Parent=gene-LU604_RS12575;Dbxref=Genbank:WP_233480640.1;Name=WP_233480640.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS12575;product=hypothetical protein;protein_id=WP_233480640.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2359480 2360510 . - . ID=gene-LU604_RS12580;Name=LU604_RS12580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12580;old_locus_tag=LU604_12580;pseudo=true NZ_CP089942.1 Protein Homology CDS 2359480 2360510 . - 0 ID=cds-LU604_RS12580;Parent=gene-LU604_RS12580;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS12580;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2361071 2361265 . - . ID=gene-LU604_RS12585;Name=LU604_RS12585;end_range=2361265,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12585;old_locus_tag=LU604_12585;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2361071 2361265 . - 0 ID=cds-LU604_RS12585;Parent=gene-LU604_RS12585;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2361265,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611700.1;locus_tag=LU604_RS12585;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2361457 2361546 . + . ID=gene-LU604_RS12590;Name=LU604_RS12590;end_range=2361546,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12590;old_locus_tag=LU604_12590;partial=true;pseudo=true;start_range=.,2361457 NZ_CP089942.1 Protein Homology CDS 2361457 2361546 . + 0 ID=cds-LU604_RS12590;Parent=gene-LU604_RS12590;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2361546,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917256.1;locus_tag=LU604_RS12590;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,2361457;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2361543 2361692 . - . ID=gene-LU604_RS12595;Name=LU604_RS12595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12595;old_locus_tag=LU604_12595;partial=true;pseudo=true;start_range=.,2361543 NZ_CP089942.1 Protein Homology CDS 2361543 2361692 . - 0 ID=cds-LU604_RS12595;Parent=gene-LU604_RS12595;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611700.1;locus_tag=LU604_RS12595;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,2361543;transl_table=11 NZ_CP089942.1 RefSeq gene 2361751 2362647 . - . ID=gene-LU604_RS12600;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=LU604_RS12600;old_locus_tag=LU604_12600 NZ_CP089942.1 Protein Homology CDS 2361751 2362647 . - 0 ID=cds-WP_016192643.1;Parent=gene-LU604_RS12600;Dbxref=Genbank:WP_016192643.1;Name=WP_016192643.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010447933.1;locus_tag=LU604_RS12600;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_016192643.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2363040 2363529 . + . ID=gene-LU604_RS12605;Name=LU604_RS12605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12605;old_locus_tag=LU604_12605;partial=true;pseudo=true;start_range=.,2363040 NZ_CP089942.1 Protein Homology CDS 2363040 2363529 . + 0 ID=cds-LU604_RS12605;Parent=gene-LU604_RS12605;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU604_RS12605;partial=true;product=transposase;pseudo=true;start_range=.,2363040;transl_table=11 NZ_CP089942.1 RefSeq gene 2364094 2365134 . - . ID=gene-LU604_RS12610;Name=LU604_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12610;old_locus_tag=LU604_12610 NZ_CP089942.1 Protein Homology CDS 2364094 2365134 . - 0 ID=cds-WP_046371813.1;Parent=gene-LU604_RS12610;Dbxref=Genbank:WP_046371813.1;Name=WP_046371813.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS12610;product=IS481 family transposase;protein_id=WP_046371813.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2365238 2365753 . + . ID=gene-LU604_RS12615;Name=LU604_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12615;old_locus_tag=LU604_12615 NZ_CP089942.1 Protein Homology CDS 2365238 2365753 . + 0 ID=cds-WP_233480789.1;Parent=gene-LU604_RS12615;Dbxref=Genbank:WP_233480789.1;Name=WP_233480789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192641.1;locus_tag=LU604_RS12615;product=phenolic acid decarboxylase;protein_id=WP_233480789.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2365824 2366819 . - . ID=gene-LU604_RS12620;Name=LU604_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12620;old_locus_tag=LU604_12620 NZ_CP089942.1 Protein Homology CDS 2365824 2366819 . - 0 ID=cds-WP_046372240.1;Parent=gene-LU604_RS12620;Dbxref=Genbank:WP_046372240.1;Name=WP_046372240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000700205.1;locus_tag=LU604_RS12620;product=alpha/beta hydrolase;protein_id=WP_046372240.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2366970 2367602 . - . ID=gene-LU604_RS12625;Name=LU604_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12625;old_locus_tag=LU604_12625 NZ_CP089942.1 Protein Homology CDS 2366970 2367602 . - 0 ID=cds-WP_016192639.1;Parent=gene-LU604_RS12625;Dbxref=Genbank:WP_016192639.1;Name=WP_016192639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539947.1;locus_tag=LU604_RS12625;product=recombinase family protein;protein_id=WP_016192639.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2367770 2370739 . + . ID=gene-LU604_RS12630;Name=LU604_RS12630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12630;old_locus_tag=LU604_12630;pseudo=true NZ_CP089942.1 Protein Homology CDS 2367770 2370739 . + 0 ID=cds-LU604_RS12630;Parent=gene-LU604_RS12630;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016241615.1;locus_tag=LU604_RS12630;product=Tn3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2371031 2371279 . + . ID=gene-LU604_RS12635;Name=xisR;gbkey=Gene;gene=xisR;gene_biotype=protein_coding;locus_tag=LU604_RS12635;old_locus_tag=LU604_12635 NZ_CP089942.1 Protein Homology CDS 2371031 2371279 . + 0 ID=cds-WP_016192638.1;Parent=gene-LU604_RS12635;Dbxref=Genbank:WP_016192638.1;Name=WP_016192638.1;gbkey=CDS;gene=xisR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816511.1;locus_tag=LU604_RS12635;product=excisionase family protein;protein_id=WP_016192638.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2371311 2372595 . + . ID=gene-LU604_RS12640;Name=LU604_RS12640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12640;old_locus_tag=LU604_12640;pseudo=true NZ_CP089942.1 Protein Homology CDS 2371311 2372595 . + 0 ID=cds-LU604_RS12640;Parent=gene-LU604_RS12640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006119560.1;locus_tag=LU604_RS12640;product=DUF3596 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2372917 2373900 . - . ID=gene-LU604_RS12645;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=LU604_RS12645;old_locus_tag=LU604_12645 NZ_CP089942.1 Protein Homology CDS 2372917 2373900 . - 0 ID=cds-WP_046371878.1;Parent=gene-LU604_RS12645;Dbxref=Genbank:WP_046371878.1;Name=WP_046371878.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668029.1;locus_tag=LU604_RS12645;product=zinc transporter ZntB;protein_id=WP_046371878.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2374229 2374561 . + . ID=gene-LU604_RS12650;Name=LU604_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12650;old_locus_tag=LU604_12650 NZ_CP089942.1 Protein Homology CDS 2374229 2374561 . + 0 ID=cds-WP_233480684.1;Parent=gene-LU604_RS12650;Dbxref=Genbank:WP_233480684.1;Name=WP_233480684.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: protein motif:HMM:NF012587.2;locus_tag=LU604_RS12650;product=PTS transporter subunit EIIB;protein_id=WP_233480684.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2374640 2375680 . + . ID=gene-LU604_RS12655;Name=LU604_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12655;old_locus_tag=LU604_12655 NZ_CP089942.1 Protein Homology CDS 2374640 2375680 . + 0 ID=cds-WP_233481635.1;Parent=gene-LU604_RS12655;Dbxref=Genbank:WP_233481635.1;Name=WP_233481635.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS12655;product=IS481 family transposase;protein_id=WP_233481635.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2375785 2377332 . + . ID=gene-LU604_RS12660;Name=LU604_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12660;old_locus_tag=LU604_12660 NZ_CP089942.1 Protein Homology CDS 2375785 2377332 . + 0 ID=cds-WP_233480686.1;Parent=gene-LU604_RS12660;Dbxref=Genbank:WP_233480686.1;Name=WP_233480686.1;Ontology_term=GO:0009401;gbkey=CDS;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192634.1;locus_tag=LU604_RS12660;product=glucose PTS transporter subunit IIA;protein_id=WP_233480686.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2377335 2378728 . + . ID=gene-LU604_RS12665;Name=ascB;gbkey=Gene;gene=ascB;gene_biotype=pseudogene;locus_tag=LU604_RS12665;old_locus_tag=LU604_12665;pseudo=true NZ_CP089942.1 Protein Homology CDS 2377335 2378728 . + 0 ID=cds-LU604_RS12665;Parent=gene-LU604_RS12665;Note=frameshifted;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=ascB;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192633.1;locus_tag=LU604_RS12665;product=6-phospho-beta-glucosidase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2378921 2379958 . + . ID=gene-LU604_RS12670;Name=LU604_RS12670;end_range=2379958,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12670;old_locus_tag=LU604_12670;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2378921 2379958 . + 0 ID=cds-LU604_RS12670;Parent=gene-LU604_RS12670;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2379958,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU604_RS12670;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2379998 2380501 . - . ID=gene-LU604_RS12675;Name=LU604_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12675;old_locus_tag=LU604_12675 NZ_CP089942.1 Protein Homology CDS 2379998 2380501 . - 0 ID=cds-WP_233480687.1;Parent=gene-LU604_RS12675;Dbxref=Genbank:WP_233480687.1;Name=WP_233480687.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU604_RS12675;product=IS1 family transposase;protein_id=WP_233480687.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2380420 2380695 . - . ID=gene-LU604_RS12680;Name=LU604_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12680;old_locus_tag=LU604_12680 NZ_CP089942.1 Protein Homology CDS 2380420 2380695 . - 0 ID=cds-WP_233480688.1;Parent=gene-LU604_RS12680;Dbxref=Genbank:WP_233480688.1;Name=WP_233480688.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU604_RS12680;product=IS1-like element transposase;protein_id=WP_233480688.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2381071 2383383 . + . ID=gene-LU604_RS12685;Name=LU604_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12685;old_locus_tag=LU604_12685 NZ_CP089942.1 Protein Homology CDS 2381071 2383383 . + 0 ID=cds-WP_233480689.1;Parent=gene-LU604_RS12685;Dbxref=Genbank:WP_233480689.1;Name=WP_233480689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010244530.1;locus_tag=LU604_RS12685;product=FdhF/YdeP family oxidoreductase;protein_id=WP_233480689.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2383815 2385746 . + . ID=gene-LU604_RS12690;Name=LU604_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12690;old_locus_tag=LU604_12690 NZ_CP089942.1 Protein Homology CDS 2383815 2385746 . + 0 ID=cds-WP_233480690.1;Parent=gene-LU604_RS12690;Dbxref=Genbank:WP_233480690.1;Name=WP_233480690.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105142.1;locus_tag=LU604_RS12690;product=exoribonuclease II;protein_id=WP_233480690.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2385905 2386501 . - . ID=gene-LU604_RS12695;Name=LU604_RS12695;end_range=2386501,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12695;old_locus_tag=LU604_12695;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2385905 2386501 . - 0 ID=cds-LU604_RS12695;Parent=gene-LU604_RS12695;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=2386501,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017371518.1;locus_tag=LU604_RS12695;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2386573 2387693 . + . ID=gene-LU604_RS12700;Name=LU604_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12700;old_locus_tag=LU604_12700 NZ_CP089942.1 Protein Homology CDS 2386573 2386831 . + 0 ID=cds-WP_233480691.1;Parent=gene-LU604_RS12700;Dbxref=Genbank:WP_233480691.1;Name=WP_233480691.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS12700;product=IS3 family transposase;protein_id=WP_233480691.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2386831 2387693 . + 2 ID=cds-WP_233480691.1;Parent=gene-LU604_RS12700;Dbxref=Genbank:WP_233480691.1;Name=WP_233480691.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS12700;product=IS3 family transposase;protein_id=WP_233480691.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2387960 2388307 . + . ID=gene-LU604_RS12705;Name=LU604_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12705;old_locus_tag=LU604_12705 NZ_CP089942.1 Protein Homology CDS 2387960 2388307 . + 0 ID=cds-WP_040465817.1;Parent=gene-LU604_RS12705;Dbxref=Genbank:WP_040465817.1;Name=WP_040465817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441487.1;locus_tag=LU604_RS12705;product=DUF1283 family protein;protein_id=WP_040465817.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2388342 2388656 . + . ID=gene-LU604_RS12710;Name=LU604_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12710;old_locus_tag=LU604_12710 NZ_CP089942.1 Protein Homology CDS 2388342 2388656 . + 0 ID=cds-WP_152664157.1;Parent=gene-LU604_RS12710;Dbxref=Genbank:WP_152664157.1;Name=WP_152664157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202013.1;locus_tag=LU604_RS12710;product=DUF1161 domain-containing protein;protein_id=WP_152664157.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2389131 2389793 . + . ID=gene-LU604_RS12715;Name=LU604_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12715;old_locus_tag=LU604_12715 NZ_CP089942.1 Protein Homology CDS 2389131 2389793 . + 0 ID=cds-WP_016192625.1;Parent=gene-LU604_RS12715;Dbxref=Genbank:WP_016192625.1;Name=WP_016192625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883640.1;locus_tag=LU604_RS12715;product=ABC transporter permease;protein_id=WP_016192625.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2389869 2390696 . + . ID=gene-LU604_RS12720;Name=LU604_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12720;old_locus_tag=LU604_12720 NZ_CP089942.1 Protein Homology CDS 2389869 2390696 . + 0 ID=cds-WP_233480790.1;Parent=gene-LU604_RS12720;Dbxref=Genbank:WP_233480790.1;Name=WP_233480790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007761450.1;locus_tag=LU604_RS12720;product=glycine/betaine ABC transporter substrate-binding protein;protein_id=WP_233480790.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2390769 2391353 . + . ID=gene-LU604_RS12725;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=LU604_RS12725;old_locus_tag=LU604_12725 NZ_CP089942.1 Protein Homology CDS 2390769 2391353 . + 0 ID=cds-WP_232426914.1;Parent=gene-LU604_RS12725;Dbxref=Genbank:WP_232426914.1;Name=WP_232426914.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001586506.1;locus_tag=LU604_RS12725;product=osmoprotectant ABC transporter permease OsmW;protein_id=WP_232426914.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2391353 2392492 . + . ID=gene-LU604_RS12730;Name=LU604_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12730;old_locus_tag=LU604_12730 NZ_CP089942.1 Protein Homology CDS 2391353 2392492 . + 0 ID=cds-WP_233480692.1;Parent=gene-LU604_RS12730;Dbxref=Genbank:WP_233480692.1;Name=WP_233480692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192622.1;locus_tag=LU604_RS12730;product=ABC transporter ATP-binding protein;protein_id=WP_233480692.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2392540 2393211 . - . ID=gene-LU604_RS12735;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=LU604_RS12735;old_locus_tag=LU604_12735 NZ_CP089942.1 Protein Homology CDS 2392540 2393211 . - 0 ID=cds-WP_016192621.1;Parent=gene-LU604_RS12735;Dbxref=Genbank:WP_016192621.1;Name=WP_016192621.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964469.1;locus_tag=LU604_RS12735;product=dethiobiotin synthase;protein_id=WP_016192621.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2393449 2394666 . - . ID=gene-LU604_RS12740;Name=LU604_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12740;old_locus_tag=LU604_12740 NZ_CP089942.1 Protein Homology CDS 2393449 2394666 . - 0 ID=cds-WP_233480693.1;Parent=gene-LU604_RS12740;Dbxref=Genbank:WP_233480693.1;Name=WP_233480693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000225262.1;locus_tag=LU604_RS12740;product=ROK family transcriptional regulator;protein_id=WP_233480693.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2394795 2394953 . - . ID=gene-LU604_RS12745;Name=LU604_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12745;old_locus_tag=LU604_12745 NZ_CP089942.1 GeneMarkS-2+ CDS 2394795 2394953 . - 0 ID=cds-WP_016192619.1;Parent=gene-LU604_RS12745;Dbxref=Genbank:WP_016192619.1;Name=WP_016192619.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS12745;product=LysR family transcriptional regulator;protein_id=WP_016192619.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2395024 2396139 . + . ID=gene-LU604_RS12750;Name=LU604_RS12750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12750;old_locus_tag=LU604_12750;pseudo=true NZ_CP089942.1 Protein Homology CDS 2395024 2396139 . + 0 ID=cds-LU604_RS12750;Parent=gene-LU604_RS12750;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202004.1;locus_tag=LU604_RS12750;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2396220 2396750 . - . ID=gene-LU604_RS12755;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=LU604_RS12755;old_locus_tag=LU604_12755 NZ_CP089942.1 Protein Homology CDS 2396220 2396750 . - 0 ID=cds-WP_233480695.1;Parent=gene-LU604_RS12755;Dbxref=Genbank:WP_233480695.1;Name=WP_233480695.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358241.1;locus_tag=LU604_RS12755;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_233480695.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2397702 2398103 . + . ID=gene-LU604_RS12760;Name=LU604_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12760;old_locus_tag=LU604_12760 NZ_CP089942.1 Protein Homology CDS 2397702 2398103 . + 0 ID=cds-WP_016192615.1;Parent=gene-LU604_RS12760;Dbxref=Genbank:WP_016192615.1;Name=WP_016192615.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005460020.1;locus_tag=LU604_RS12760;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_016192615.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2398231 2399155 . + . ID=gene-LU604_RS12765;Name=tus;gbkey=Gene;gene=tus;gene_biotype=pseudogene;locus_tag=LU604_RS12765;old_locus_tag=LU604_12765;pseudo=true NZ_CP089942.1 Protein Homology CDS 2398231 2399155 . + 0 ID=cds-LU604_RS12765;Parent=gene-LU604_RS12765;Note=frameshifted;Ontology_term=GO:0006274,GO:0003677;gbkey=CDS;gene=tus;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544240.1;locus_tag=LU604_RS12765;product=DNA replication terminus site-binding protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2399220 2400617 . - . ID=gene-LU604_RS12770;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=LU604_RS12770;old_locus_tag=LU604_12770 NZ_CP089942.1 Protein Homology CDS 2399220 2400617 . - 0 ID=cds-WP_233481636.1;Parent=gene-LU604_RS12770;Dbxref=Genbank:WP_233481636.1;Name=WP_233481636.1;Ontology_term=GO:0006099,GO:0004333;gbkey=CDS;gene=fumC;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192613.1;locus_tag=LU604_RS12770;product=class II fumarate hydratase;protein_id=WP_233481636.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2401896 2403404 . + . ID=gene-LU604_RS12775;Name=LU604_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12775;old_locus_tag=LU604_12775 NZ_CP089942.1 Protein Homology CDS 2401896 2403404 . + 0 ID=cds-WP_233480697.1;Parent=gene-LU604_RS12775;Dbxref=Genbank:WP_233480697.1;Name=WP_233480697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192611.1;locus_tag=LU604_RS12775;product=YdgA family protein;protein_id=WP_233480697.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2403819 2403944 . - . ID=gene-LU604_RS26995;Name=LU604_RS26995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26995 NZ_CP089942.1 GeneMarkS-2+ CDS 2403819 2403944 . - 0 ID=cds-WP_267921519.1;Parent=gene-LU604_RS26995;Dbxref=Genbank:WP_267921519.1;Name=WP_267921519.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26995;product=hypothetical protein;protein_id=WP_267921519.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2404175 2404366 . - . ID=gene-LU604_RS12780;Name=LU604_RS12780;end_range=2404366,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12780;old_locus_tag=LU604_12780;partial=true;pseudo=true;start_range=.,2404175 NZ_CP089942.1 Protein Homology CDS 2404175 2404366 . - 0 ID=cds-LU604_RS12780;Parent=gene-LU604_RS12780;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2404366,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230911.1;locus_tag=LU604_RS12780;partial=true;product=type IV secretion protein Rhs;pseudo=true;start_range=.,2404175;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2404630 2404916 . + . ID=gene-LU604_RS12785;Name=LU604_RS12785;end_range=2404916,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12785;old_locus_tag=LU604_12785;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2404630 2404916 . + 0 ID=cds-LU604_RS12785;Parent=gene-LU604_RS12785;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2404916,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121195.1;locus_tag=LU604_RS12785;partial=true;product=adenosine deaminase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2405033 2405211 . + . ID=gene-LU604_RS12790;Name=LU604_RS12790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12790;old_locus_tag=LU604_12790;pseudo=true NZ_CP089942.1 Protein Homology CDS 2405033 2405211 . + 0 ID=cds-LU604_RS12790;Parent=gene-LU604_RS12790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322936.1;locus_tag=LU604_RS12790;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2405220 2406420 . + . ID=gene-LU604_RS12795;Name=LU604_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12795;old_locus_tag=LU604_12795 NZ_CP089942.1 Protein Homology CDS 2405220 2406047 . + 0 ID=cds-WP_233478723.1-2;Parent=gene-LU604_RS12795;Dbxref=Genbank:WP_233478723.1;Name=WP_233478723.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS12795;product=IS91 family transposase;protein_id=WP_233478723.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2406049 2406420 . + 0 ID=cds-WP_233478723.1-2;Parent=gene-LU604_RS12795;Dbxref=Genbank:WP_233478723.1;Name=WP_233478723.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS12795;product=IS91 family transposase;protein_id=WP_233478723.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2406606 2407379 . + . ID=gene-LU604_RS12800;Name=LU604_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12800;old_locus_tag=LU604_12800 NZ_CP089942.1 Protein Homology CDS 2406606 2407379 . + 0 ID=cds-WP_233480791.1;Parent=gene-LU604_RS12800;Dbxref=Genbank:WP_233480791.1;Name=WP_233480791.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024986.2;locus_tag=LU604_RS12800;product=pentapeptide repeat-containing protein;protein_id=WP_233480791.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2407578 2407982 . - . ID=gene-LU604_RS12805;Name=LU604_RS12805;end_range=2407982,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12805;old_locus_tag=LU604_12805;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2407578 2407982 . - 0 ID=cds-LU604_RS12805;Parent=gene-LU604_RS12805;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2407982,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS12805;partial=true;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2408066 2408383 . + . ID=gene-LU604_RS12810;Name=LU604_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12810;old_locus_tag=LU604_12810 NZ_CP089942.1 Protein Homology CDS 2408066 2408383 . + 0 ID=cds-WP_016192605.1;Parent=gene-LU604_RS12810;Dbxref=Genbank:WP_016192605.1;Name=WP_016192605.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023190.2;locus_tag=LU604_RS12810;product=L-arabinose isomerase;protein_id=WP_016192605.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2408649 2409605 . - . ID=gene-LU604_RS12815;Name=LU604_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12815;old_locus_tag=LU604_12815 NZ_CP089942.1 Protein Homology CDS 2408649 2409605 . - 0 ID=cds-WP_233480698.1;Parent=gene-LU604_RS12815;Dbxref=Genbank:WP_233480698.1;Name=WP_233480698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134480.1;locus_tag=LU604_RS12815;product=ABC transporter substrate-binding protein;protein_id=WP_233480698.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2410035 2410451 . - . ID=gene-LU604_RS12820;Name=LU604_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12820;old_locus_tag=LU604_12820 NZ_CP089942.1 Protein Homology CDS 2410035 2410451 . - 0 ID=cds-WP_016192603.1;Parent=gene-LU604_RS12820;Dbxref=Genbank:WP_016192603.1;Name=WP_016192603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457733.1;locus_tag=LU604_RS12820;product=cupin domain-containing protein;protein_id=WP_016192603.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2410907 2411923 . + . ID=gene-LU604_RS12825;Name=LU604_RS12825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12825;old_locus_tag=LU604_12825;partial=true;pseudo=true;start_range=.,2410907 NZ_CP089942.1 Protein Homology CDS 2410907 2411923 . + 0 ID=cds-LU604_RS12825;Parent=gene-LU604_RS12825;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS12825;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,2410907;transl_table=11 NZ_CP089942.1 RefSeq gene 2412077 2413117 . + . ID=gene-LU604_RS12830;Name=LU604_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12830;old_locus_tag=LU604_12830 NZ_CP089942.1 Protein Homology CDS 2412077 2413117 . + 0 ID=cds-WP_233478553.1-15;Parent=gene-LU604_RS12830;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS12830;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2413178 2413567 . - . ID=gene-LU604_RS12835;Name=LU604_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12835;old_locus_tag=LU604_12835 NZ_CP089942.1 Protein Homology CDS 2413178 2413567 . - 0 ID=cds-WP_233480699.1;Parent=gene-LU604_RS12835;Dbxref=Genbank:WP_233480699.1;Name=WP_233480699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001281697.1;locus_tag=LU604_RS12835;product=DNA-binding protein;protein_id=WP_233480699.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2413564 2413992 . - . ID=gene-LU604_RS12840;Name=LU604_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12840;old_locus_tag=LU604_12840 NZ_CP089942.1 Protein Homology CDS 2413564 2413992 . - 0 ID=cds-WP_233480700.1;Parent=gene-LU604_RS12840;Dbxref=Genbank:WP_233480700.1;Name=WP_233480700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803499.1;locus_tag=LU604_RS12840;product=regulatory protein GemA;protein_id=WP_233480700.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2413982 2414183 . - . ID=gene-LU604_RS12845;Name=LU604_RS12845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12845;old_locus_tag=LU604_12845;pseudo=true NZ_CP089942.1 Protein Homology CDS 2413982 2414183 . - 0 ID=cds-LU604_RS12845;Parent=gene-LU604_RS12845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000967768.1;locus_tag=LU604_RS12845;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2414176 2414829 . - . ID=gene-LU604_RS12850;Name=LU604_RS12850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12850;old_locus_tag=LU604_12850;pseudo=true NZ_CP089942.1 Protein Homology CDS 2414176 2414829 . - 0 ID=cds-LU604_RS12850;Parent=gene-LU604_RS12850;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118592.1;locus_tag=LU604_RS12850;product=DUF2786 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2414816 2415079 . - . ID=gene-LU604_RS12855;Name=LU604_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12855;old_locus_tag=LU604_12855 NZ_CP089942.1 Protein Homology CDS 2414816 2415079 . - 0 ID=cds-WP_233480701.1;Parent=gene-LU604_RS12855;Dbxref=Genbank:WP_233480701.1;Name=WP_233480701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192600.1;locus_tag=LU604_RS12855;product=hypothetical protein;protein_id=WP_233480701.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2415076 2415264 . - . ID=gene-LU604_RS12860;Name=LU604_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12860;old_locus_tag=LU604_12860 NZ_CP089942.1 Protein Homology CDS 2415076 2415264 . - 0 ID=cds-WP_233480702.1;Parent=gene-LU604_RS12860;Dbxref=Genbank:WP_233480702.1;Name=WP_233480702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001569384.1;locus_tag=LU604_RS12860;product=hypothetical protein;protein_id=WP_233480702.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2415342 2415788 . - . ID=gene-LU604_RS12865;Name=LU604_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12865;old_locus_tag=LU604_12865 NZ_CP089942.1 Protein Homology CDS 2415342 2415788 . - 0 ID=cds-WP_233480703.1;Parent=gene-LU604_RS12865;Dbxref=Genbank:WP_233480703.1;Name=WP_233480703.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022807.2;locus_tag=LU604_RS12865;product=DUF3164 family protein;protein_id=WP_233480703.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2415826 2416666 . + . ID=gene-LU604_RS12870;Name=LU604_RS12870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12870;old_locus_tag=LU604_12870;pseudo=true NZ_CP089942.1 Protein Homology CDS 2415826 2416666 . + 0 ID=cds-LU604_RS12870;Parent=gene-LU604_RS12870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009636102.1;locus_tag=LU604_RS12870;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2416905 2417601 . - . ID=gene-LU604_RS12875;Name=LU604_RS12875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12875;old_locus_tag=LU604_12875;pseudo=true NZ_CP089942.1 Protein Homology CDS 2416905 2417601 . - 0 ID=cds-LU604_RS12875;Parent=gene-LU604_RS12875;Note=frameshifted;Ontology_term=GO:0004089;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013512251.1;locus_tag=LU604_RS12875;product=carbonic anhydrase family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2418130 2418827 . - . ID=gene-LU604_RS12880;Name=LU604_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12880;old_locus_tag=LU604_12880 NZ_CP089942.1 Protein Homology CDS 2418566 2418827 . - 0 ID=cds-WP_233480704.1;Parent=gene-LU604_RS12880;Dbxref=Genbank:WP_233480704.1;Name=WP_233480704.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS12880;product=IS1 family transposase;protein_id=WP_233480704.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2418130 2418566 . - 2 ID=cds-WP_233480704.1;Parent=gene-LU604_RS12880;Dbxref=Genbank:WP_233480704.1;Name=WP_233480704.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS12880;product=IS1 family transposase;protein_id=WP_233480704.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2419238 2419608 . - . ID=gene-LU604_RS12885;Name=LU604_RS12885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12885;old_locus_tag=LU604_12885;partial=true;pseudo=true;start_range=.,2419238 NZ_CP089942.1 Protein Homology CDS 2419238 2419608 . - 0 ID=cds-LU604_RS12885;Parent=gene-LU604_RS12885;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011497995.1;locus_tag=LU604_RS12885;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,2419238;transl_table=11 NZ_CP089942.1 RefSeq gene 2419804 2421000 . - . ID=gene-LU604_RS12890;Name=LU604_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12890;old_locus_tag=LU604_12890 NZ_CP089942.1 Protein Homology CDS 2419804 2421000 . - 0 ID=cds-WP_016192590.1;Parent=gene-LU604_RS12890;Dbxref=Genbank:WP_016192590.1;Name=WP_016192590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544262.1;locus_tag=LU604_RS12890;product=trans-2-enoyl-CoA reductase family protein;protein_id=WP_016192590.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2421184 2422842 . - . ID=gene-LU604_RS12895;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=LU604_RS12895;old_locus_tag=LU604_12895 NZ_CP089942.1 Protein Homology CDS 2421184 2422842 . - 0 ID=cds-WP_233480705.1;Parent=gene-LU604_RS12895;Dbxref=Genbank:WP_233480705.1;Name=WP_233480705.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192589.1;locus_tag=LU604_RS12895;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_233480705.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2423424 2424698 . + . ID=gene-LU604_RS12900;Name=LU604_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12900;old_locus_tag=LU604_12900 NZ_CP089942.1 Protein Homology CDS 2423424 2424698 . + 0 ID=cds-WP_016192588.1;Parent=gene-LU604_RS12900;Dbxref=Genbank:WP_016192588.1;Name=WP_016192588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=LU604_RS12900;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WP_016192588.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2425175 2425621 . - . ID=gene-LU604_RS12905;Name=LU604_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12905;old_locus_tag=LU604_12905 NZ_CP089942.1 Protein Homology CDS 2425175 2425621 . - 0 ID=cds-WP_016192587.1;Parent=gene-LU604_RS12905;Dbxref=Genbank:WP_016192587.1;Name=WP_016192587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202285.1;locus_tag=LU604_RS12905;product=DUF441 domain-containing protein;protein_id=WP_016192587.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2425785 2425988 . - . ID=gene-LU604_RS12910;Name=LU604_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12910;old_locus_tag=LU604_12910 NZ_CP089942.1 GeneMarkS-2+ CDS 2425785 2425988 . - 0 ID=cds-WP_016192586.1;Parent=gene-LU604_RS12910;Dbxref=Genbank:WP_016192586.1;Name=WP_016192586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS12910;product=hypothetical protein;protein_id=WP_016192586.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2426102 2427327 . - . ID=gene-LU604_RS12915;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=pseudogene;locus_tag=LU604_RS12915;old_locus_tag=LU604_12915;partial=true;pseudo=true;start_range=.,2426102 NZ_CP089942.1 Protein Homology CDS 2426102 2427327 . - 0 ID=cds-LU604_RS12915;Parent=gene-LU604_RS12915;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006147,GO:0008892;gbkey=CDS;gene=guaD;go_function=guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004944058.1;locus_tag=LU604_RS12915;partial=true;product=guanine deaminase;pseudo=true;start_range=.,2426102;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2427484 2427900 . + . ID=gene-LU604_RS12920;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS12920;old_locus_tag=LU604_12920;pseudo=true NZ_CP089942.1 Protein Homology CDS 2427484 2427900 . + 0 ID=cds-LU604_RS12920;Parent=gene-LU604_RS12920;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191989.1;locus_tag=LU604_RS12920;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2427949 2429156 . + . ID=gene-LU604_RS12925;Name=LU604_RS12925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12925;old_locus_tag=LU604_12925;pseudo=true NZ_CP089942.1 Protein Homology CDS 2427949 2429156 . + 0 ID=cds-LU604_RS12925;Parent=gene-LU604_RS12925;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU604_RS12925;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2429212 2429538 . - . ID=gene-LU604_RS12930;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=LU604_RS12930;old_locus_tag=LU604_12930 NZ_CP089942.1 Protein Homology CDS 2429212 2429538 . - 0 ID=cds-WP_016192581.1;Parent=gene-LU604_RS12930;Dbxref=Genbank:WP_016192581.1;Name=WP_016192581.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415798.2;locus_tag=LU604_RS12930;product=stress response translation initiation inhibitor YciH;protein_id=WP_016192581.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2429538 2430254 . - . ID=gene-LU604_RS12935;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=LU604_RS12935;old_locus_tag=LU604_12935 NZ_CP089942.1 Protein Homology CDS 2429538 2430254 . - 0 ID=cds-WP_016192580.1;Parent=gene-LU604_RS12935;Dbxref=Genbank:WP_016192580.1;Name=WP_016192580.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169882.1;locus_tag=LU604_RS12935;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_016192580.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2430415 2430831 . - . ID=gene-LU604_RS12940;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS12940;old_locus_tag=LU604_12940 NZ_CP089942.1 Protein Homology CDS 2430415 2430831 . - 0 ID=cds-WP_233479166.1-4;Parent=gene-LU604_RS12940;Dbxref=Genbank:WP_233479166.1;Name=WP_233479166.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368599.1;locus_tag=LU604_RS12940;product=IS200/IS605 family transposase;protein_id=WP_233479166.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2430855 2432063 . + . ID=gene-LU604_RS12945;Name=LU604_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12945;old_locus_tag=LU604_12945 NZ_CP089942.1 Protein Homology CDS 2430855 2432063 . + 0 ID=cds-WP_233479028.1-2;Parent=gene-LU604_RS12945;Dbxref=Genbank:WP_233479028.1;Name=WP_233479028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368856.1;locus_tag=LU604_RS12945;product=transposase;protein_id=WP_233479028.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2432202 2433371 . - . ID=gene-LU604_RS12950;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=LU604_RS12950;old_locus_tag=LU604_12950 NZ_CP089942.1 Protein Homology CDS 2432202 2433371 . - 0 ID=cds-WP_016192579.1;Parent=gene-LU604_RS12950;Dbxref=Genbank:WP_016192579.1;Name=WP_016192579.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=LU604_RS12950;product=lipopolysaccharide assembly protein LapB;protein_id=WP_016192579.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2433378 2433683 . - . ID=gene-LU604_RS12955;Name=LU604_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12955;old_locus_tag=LU604_12955 NZ_CP089942.1 Protein Homology CDS 2433378 2433683 . - 0 ID=cds-WP_233480706.1;Parent=gene-LU604_RS12955;Dbxref=Genbank:WP_233480706.1;Name=WP_233480706.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202378.1;locus_tag=LU604_RS12955;product=lipopolysaccharide assembly protein LapA domain-containing protein;protein_id=WP_233480706.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2433832 2434593 . - . ID=gene-LU604_RS12960;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=LU604_RS12960;old_locus_tag=LU604_12960 NZ_CP089942.1 Protein Homology CDS 2433832 2434593 . - 0 ID=cds-WP_016192577.1;Parent=gene-LU604_RS12960;Dbxref=Genbank:WP_016192577.1;Name=WP_016192577.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003853858.1;locus_tag=LU604_RS12960;product=phosphatidylglycerophosphatase B;protein_id=WP_016192577.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2434823 2435410 . + . ID=gene-LU604_RS12965;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=LU604_RS12965;old_locus_tag=LU604_12965 NZ_CP089942.1 Protein Homology CDS 2434823 2435410 . + 0 ID=cds-WP_016192576.1;Parent=gene-LU604_RS12965;Dbxref=Genbank:WP_016192576.1;Name=WP_016192576.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509242.1;locus_tag=LU604_RS12965;product=GTP cyclohydrolase II;protein_id=WP_016192576.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2435654 2436657 . + . ID=gene-LU604_RS12970;Name=LU604_RS12970;end_range=2436657,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS12970;old_locus_tag=LU604_12970;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2435654 2436657 . + 0 ID=cds-LU604_RS12970;Parent=gene-LU604_RS12970;Note=programmed frameshift%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2436657,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671526.1;locus_tag=LU604_RS12970;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2437246 2437407 . - . ID=gene-LU604_RS12975;Name=LU604_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12975;old_locus_tag=LU604_12975 NZ_CP089942.1 Protein Homology CDS 2437246 2437407 . - 0 ID=cds-WP_233480707.1;Parent=gene-LU604_RS12975;Dbxref=Genbank:WP_233480707.1;Name=WP_233480707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192571.1;locus_tag=LU604_RS12975;product=YmiA family putative membrane protein;protein_id=WP_233480707.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2437883 2438580 . - . ID=gene-LU604_RS12980;Name=LU604_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12980;old_locus_tag=LU604_12980 NZ_CP089942.1 Protein Homology CDS 2438331 2438580 . - 0 ID=cds-WP_233480708.1;Parent=gene-LU604_RS12980;Dbxref=Genbank:WP_233480708.1;Name=WP_233480708.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS12980;product=IS1 family transposase;protein_id=WP_233480708.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2437883 2438331 . - 2 ID=cds-WP_233480708.1;Parent=gene-LU604_RS12980;Dbxref=Genbank:WP_233480708.1;Name=WP_233480708.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS12980;product=IS1 family transposase;protein_id=WP_233480708.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2438653 2439627 . - . ID=gene-LU604_RS12985;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=LU604_RS12985;old_locus_tag=LU604_12985 NZ_CP089942.1 Protein Homology CDS 2438653 2439627 . - 0 ID=cds-WP_233480792.1;Parent=gene-LU604_RS12985;Dbxref=Genbank:WP_233480792.1;Name=WP_233480792.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=LU604_RS12985;product=HTH-type transcriptional regulator CysB;protein_id=WP_233480792.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2439835 2442447 . - . ID=gene-LU604_RS12990;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=LU604_RS12990;old_locus_tag=LU604_12990 NZ_CP089942.1 Protein Homology CDS 2439835 2442447 . - 0 ID=cds-WP_233480709.1;Parent=gene-LU604_RS12990;Dbxref=Genbank:WP_233480709.1;Name=WP_233480709.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192569.1;locus_tag=LU604_RS12990;product=type I DNA topoisomerase;protein_id=WP_233480709.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2442852 2442977 . + . ID=gene-LU604_RS12995;Name=LU604_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS12995;old_locus_tag=LU604_12995 NZ_CP089942.1 Protein Homology CDS 2442852 2442977 . + 0 ID=cds-WP_016192568.1;Parent=gene-LU604_RS12995;Dbxref=Genbank:WP_016192568.1;Name=WP_016192568.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022156.2;locus_tag=LU604_RS12995;product=DUF2498 family protein;protein_id=WP_016192568.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2442997 2443800 . - . ID=gene-LU604_RS13000;Name=LU604_RS13000;end_range=2443800,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13000;old_locus_tag=LU604_13000;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2442997 2443800 . - 0 ID=cds-LU604_RS13000;Parent=gene-LU604_RS13000;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=2443800,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011787828.1;locus_tag=LU604_RS13000;partial=true;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2443872 2444318 . + . ID=gene-LU604_RS13005;Name=LU604_RS13005;end_range=2444318,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13005;old_locus_tag=LU604_13005;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2443872 2444318 . + 0 ID=cds-LU604_RS13005;Parent=gene-LU604_RS13005;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2444318,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU604_RS13005;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2444798 2445043 . - . ID=gene-LU604_RS13010;Name=LU604_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13010;old_locus_tag=LU604_13010 NZ_CP089942.1 GeneMarkS-2+ CDS 2444798 2445043 . - 0 ID=cds-WP_016192565.1;Parent=gene-LU604_RS13010;Dbxref=Genbank:WP_016192565.1;Name=WP_016192565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS13010;product=hypothetical protein;protein_id=WP_016192565.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2445139 2445584 . - . ID=gene-LU604_RS13015;Name=LU604_RS13015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13015;old_locus_tag=LU604_13015;pseudo=true NZ_CP089942.1 Protein Homology CDS 2445139 2445584 . - 0 ID=cds-LU604_RS13015;Parent=gene-LU604_RS13015;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU604_RS13015;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2445821 2449129 . + . ID=gene-LU604_RS13020;Name=LU604_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13020;old_locus_tag=LU604_13020 NZ_CP089942.1 Protein Homology CDS 2445821 2449129 . + 0 ID=cds-WP_233480710.1;Parent=gene-LU604_RS13020;Dbxref=Genbank:WP_233480710.1;Name=WP_233480710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192563.1;locus_tag=LU604_RS13020;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_233480710.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2449316 2450523 . - . ID=gene-LU604_RS13025;Name=LU604_RS13025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13025;old_locus_tag=LU604_13025;pseudo=true NZ_CP089942.1 Protein Homology CDS 2449316 2450523 . - 0 ID=cds-LU604_RS13025;Parent=gene-LU604_RS13025;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU604_RS13025;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2450614 2451252 . + . ID=gene-LU604_RS13030;Name=LU604_RS13030;end_range=2451252,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13030;old_locus_tag=LU604_13030;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2450614 2451252 . + 0 ID=cds-LU604_RS13030;Parent=gene-LU604_RS13030;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2451252,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS13030;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2451798 2452688 . + . ID=gene-LU604_RS13035;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=LU604_RS13035;old_locus_tag=LU604_13035 NZ_CP089942.1 Protein Homology CDS 2451798 2452688 . + 0 ID=cds-WP_233480711.1;Parent=gene-LU604_RS13035;Dbxref=Genbank:WP_233480711.1;Name=WP_233480711.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001146150.1;locus_tag=LU604_RS13035;product=peptide ABC transporter permease SapC;protein_id=WP_233480711.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2452689 2453681 . + . ID=gene-LU604_RS13040;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=LU604_RS13040;old_locus_tag=LU604_13040 NZ_CP089942.1 Protein Homology CDS 2452689 2453681 . + 0 ID=cds-WP_016192558.1;Parent=gene-LU604_RS13040;Dbxref=Genbank:WP_016192558.1;Name=WP_016192558.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001128868.1;locus_tag=LU604_RS13040;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_016192558.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2453681 2454493 . + . ID=gene-LU604_RS13045;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=LU604_RS13045;old_locus_tag=LU604_13045 NZ_CP089942.1 Protein Homology CDS 2453681 2454493 . + 0 ID=cds-WP_233480793.1;Parent=gene-LU604_RS13045;Dbxref=Genbank:WP_233480793.1;Name=WP_233480793.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192557.1;locus_tag=LU604_RS13045;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_233480793.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2454599 2455762 . + . ID=gene-LU604_RS13050;Name=LU604_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13050;old_locus_tag=LU604_13050 NZ_CP089942.1 Protein Homology CDS 2454599 2455762 . + 0 ID=cds-WP_233480712.1;Parent=gene-LU604_RS13050;Dbxref=Genbank:WP_233480712.1;Name=WP_233480712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192556.1;locus_tag=LU604_RS13050;product=oxidoreductase;protein_id=WP_233480712.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2455751 2456056 . - . ID=gene-LU604_RS13055;Name=LU604_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13055;old_locus_tag=LU604_13055 NZ_CP089942.1 GeneMarkS-2+ CDS 2455751 2456056 . - 0 ID=cds-WP_040465800.1;Parent=gene-LU604_RS13055;Dbxref=Genbank:WP_040465800.1;Name=WP_040465800.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS13055;product=hypothetical protein;protein_id=WP_040465800.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2456129 2457685 . - . ID=gene-LU604_RS13060;Name=LU604_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13060;old_locus_tag=LU604_13060 NZ_CP089942.1 Protein Homology CDS 2456129 2457685 . - 0 ID=cds-WP_233480713.1;Parent=gene-LU604_RS13060;Dbxref=Genbank:WP_233480713.1;Name=WP_233480713.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013318053.1;locus_tag=LU604_RS13060;product=methyl-accepting chemotaxis protein;protein_id=WP_233480713.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2458000 2461896 . - . ID=gene-LU604_RS13065;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=LU604_RS13065;old_locus_tag=LU604_13065 NZ_CP089942.1 Protein Homology CDS 2458000 2461896 . - 0 ID=cds-WP_233481304.1;Parent=gene-LU604_RS13065;Dbxref=Genbank:WP_233481304.1;Name=WP_233481304.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202294.1;locus_tag=LU604_RS13065;product=ATP-dependent RNA helicase HrpA;protein_id=WP_233481304.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2462129 2462734 . + . ID=gene-LU604_RS13070;Name=LU604_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13070;old_locus_tag=LU604_13070 NZ_CP089942.1 Protein Homology CDS 2462129 2462734 . + 0 ID=cds-WP_016192552.1;Parent=gene-LU604_RS13070;Dbxref=Genbank:WP_016192552.1;Name=WP_016192552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707664.1;locus_tag=LU604_RS13070;product=FMN-dependent NADH-azoreductase;protein_id=WP_016192552.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2462925 2463622 . - . ID=gene-LU604_RS13075;Name=LU604_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13075;old_locus_tag=LU604_13075 NZ_CP089942.1 Protein Homology CDS 2463373 2463622 . - 0 ID=cds-WP_233480715.1;Parent=gene-LU604_RS13075;Dbxref=Genbank:WP_233480715.1;Name=WP_233480715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS13075;product=IS1 family transposase;protein_id=WP_233480715.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2462925 2463373 . - 2 ID=cds-WP_233480715.1;Parent=gene-LU604_RS13075;Dbxref=Genbank:WP_233480715.1;Name=WP_233480715.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS13075;product=IS1 family transposase;protein_id=WP_233480715.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2463557 2463727 . + . ID=gene-LU604_RS13080;Name=LU604_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13080;old_locus_tag=LU604_13080 NZ_CP089942.1 GeneMarkS-2+ CDS 2463557 2463727 . + 0 ID=cds-WP_200896945.1;Parent=gene-LU604_RS13080;Dbxref=Genbank:WP_200896945.1;Name=WP_200896945.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS13080;product=hypothetical protein;protein_id=WP_200896945.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2463800 2463931 . + . ID=gene-LU604_RS13085;Name=LU604_RS13085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13085;old_locus_tag=LU604_13085;partial=true;pseudo=true;start_range=.,2463800 NZ_CP089942.1 Protein Homology CDS 2463800 2463931 . + 0 ID=cds-LU604_RS13085;Parent=gene-LU604_RS13085;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917256.1;locus_tag=LU604_RS13085;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,2463800;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2464055 2465217 . - . ID=gene-LU604_RS13090;Name=LU604_RS13090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13090;old_locus_tag=LU604_13090;pseudo=true NZ_CP089942.1 Protein Homology CDS 2464055 2465217 . - 0 ID=cds-LU604_RS13090;Parent=gene-LU604_RS13090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000942659.1;locus_tag=LU604_RS13090;product=RNA-guided endonuclease TnpB family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2465336 2465701 . + . ID=gene-LU604_RS13095;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS13095;old_locus_tag=LU604_13095 NZ_CP089942.1 Protein Homology CDS 2465336 2465701 . + 0 ID=cds-WP_233478468.1;Parent=gene-LU604_RS13095;Dbxref=Genbank:WP_233478468.1;Name=WP_233478468.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041205574.1;locus_tag=LU604_RS13095;product=IS200/IS605 family transposase;protein_id=WP_233478468.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2465799 2466125 . - . ID=gene-LU604_RS13100;Name=LU604_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13100;old_locus_tag=LU604_13100 NZ_CP089942.1 Protein Homology CDS 2465799 2466125 . - 0 ID=cds-WP_016192551.1;Parent=gene-LU604_RS13100;Dbxref=Genbank:WP_016192551.1;Name=WP_016192551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157653.1;locus_tag=LU604_RS13100;product=YdbL family protein;protein_id=WP_016192551.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2466136 2466324 . - . ID=gene-LU604_RS13105;Name=LU604_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13105;old_locus_tag=LU604_13105 NZ_CP089942.1 Protein Homology CDS 2466136 2466324 . - 0 ID=cds-WP_016192550.1;Parent=gene-LU604_RS13105;Dbxref=Genbank:WP_016192550.1;Name=WP_016192550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010618431.1;locus_tag=LU604_RS13105;product=YnbE family lipoprotein;protein_id=WP_016192550.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2466311 2468938 . - . ID=gene-LU604_RS13110;Name=LU604_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13110;old_locus_tag=LU604_13110 NZ_CP089942.1 Protein Homology CDS 2466311 2468938 . - 0 ID=cds-WP_233478469.1;Parent=gene-LU604_RS13110;Dbxref=Genbank:WP_233478469.1;Name=WP_233478469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192549.1;locus_tag=LU604_RS13110;product=YdbH family protein;protein_id=WP_233478469.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2469187 2469444 . + . ID=gene-LU604_RS13115;Name=LU604_RS13115;end_range=2469444,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13115;old_locus_tag=LU604_13115;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2469187 2469444 . + 0 ID=cds-LU604_RS13115;Parent=gene-LU604_RS13115;Note=fermentative%3B catalyzes the formationof pyruvate from lactate%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2469444,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132304.1;locus_tag=LU604_RS13115;partial=true;product=2-hydroxyacid dehydrogenase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2469365 2469565 . + . ID=gene-LU604_RS13120;Name=LU604_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13120;old_locus_tag=LU604_13120 NZ_CP089942.1 GeneMarkS-2+ CDS 2469365 2469565 . + 0 ID=cds-WP_016192548.1;Parent=gene-LU604_RS13120;Dbxref=Genbank:WP_016192548.1;Name=WP_016192548.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS13120;product=hypothetical protein;protein_id=WP_016192548.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2469593 2470135 . + . ID=gene-LU604_RS13125;Name=LU604_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13125;old_locus_tag=LU604_13125 NZ_CP089942.1 Protein Homology CDS 2469593 2470135 . + 0 ID=cds-WP_233478470.1;Parent=gene-LU604_RS13125;Dbxref=Genbank:WP_233478470.1;Name=WP_233478470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192547.1;locus_tag=LU604_RS13125;product=peptidoglycan recognition family protein;protein_id=WP_233478470.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2470222 2470545 . + . ID=gene-LU604_RS13130;Name=LU604_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13130;old_locus_tag=LU604_13130 NZ_CP089942.1 Protein Homology CDS 2470222 2470545 . + 0 ID=cds-WP_233478471.1;Parent=gene-LU604_RS13130;Dbxref=Genbank:WP_233478471.1;Name=WP_233478471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192546.1;locus_tag=LU604_RS13130;product=hypothetical protein;protein_id=WP_233478471.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2470647 2471821 . + . ID=gene-LU604_RS13135;Name=LU604_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13135;old_locus_tag=LU604_13135 NZ_CP089942.1 Protein Homology CDS 2470647 2470902 . + 0 ID=cds-WP_233478472.1;Parent=gene-LU604_RS13135;Dbxref=Genbank:WP_233478472.1;Name=WP_233478472.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612096.1;locus_tag=LU604_RS13135;product=IS3 family transposase;protein_id=WP_233478472.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2470902 2471821 . + 2 ID=cds-WP_233478472.1;Parent=gene-LU604_RS13135;Dbxref=Genbank:WP_233478472.1;Name=WP_233478472.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612096.1;locus_tag=LU604_RS13135;product=IS3 family transposase;protein_id=WP_233478472.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2471820 2471924 . - . ID=gene-LU604_RS13140;Name=LU604_RS13140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13140;old_locus_tag=LU604_13140;partial=true;pseudo=true;start_range=.,2471820 NZ_CP089942.1 Protein Homology CDS 2471820 2471924 . - 0 ID=cds-LU604_RS13140;Parent=gene-LU604_RS13140;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011787828.1;locus_tag=LU604_RS13140;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,2471820;transl_table=11 NZ_CP089942.1 RefSeq gene 2472027 2472119 . + . ID=gene-LU604_RS13145;Name=LU604_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13145;old_locus_tag=LU604_13145 NZ_CP089942.1 Protein Homology CDS 2472027 2472119 . + 0 ID=cds-WP_233478473.1;Parent=gene-LU604_RS13145;Dbxref=Genbank:WP_233478473.1;Name=WP_233478473.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022156.2;locus_tag=LU604_RS13145;product=DUF2498 family protein;protein_id=WP_233478473.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2472198 2473236 . + . ID=gene-LU604_RS13150;Name=LU604_RS13150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13150;old_locus_tag=LU604_13150;pseudo=true NZ_CP089942.1 Protein Homology CDS 2472198 2473236 . + 0 ID=cds-LU604_RS13150;Parent=gene-LU604_RS13150;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS13150;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2473386 2474435 . - . ID=gene-LU604_RS13155;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=LU604_RS13155;old_locus_tag=LU604_13155 NZ_CP089942.1 Protein Homology CDS 2473386 2474435 . - 0 ID=cds-WP_016192544.1;Parent=gene-LU604_RS13155;Dbxref=Genbank:WP_016192544.1;Name=WP_016192544.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699213.1;locus_tag=LU604_RS13155;product=protease SohB;protein_id=WP_016192544.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2474633 2475394 . + . ID=gene-LU604_RS13160;Name=LU604_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13160;old_locus_tag=LU604_13160 NZ_CP089942.1 Protein Homology CDS 2474633 2475394 . + 0 ID=cds-WP_233478474.1;Parent=gene-LU604_RS13160;Dbxref=Genbank:WP_233478474.1;Name=WP_233478474.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004387663.1;locus_tag=LU604_RS13160;product=YciK family oxidoreductase;protein_id=WP_233478474.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2475936 2476799 . - . ID=gene-LU604_RS13165;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=LU604_RS13165;old_locus_tag=LU604_13165 NZ_CP089942.1 Protein Homology CDS 2475936 2476799 . - 0 ID=cds-WP_016192542.1;Parent=gene-LU604_RS13165;Dbxref=Genbank:WP_016192542.1;Name=WP_016192542.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509251.1;locus_tag=LU604_RS13165;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_016192542.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2477673 2478370 . + . ID=gene-LU604_RS13170;Name=LU604_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13170;old_locus_tag=LU604_13170 NZ_CP089942.1 Protein Homology CDS 2477673 2477922 . + 0 ID=cds-WP_233481305.1;Parent=gene-LU604_RS13170;Dbxref=Genbank:WP_233481305.1;Name=WP_233481305.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS13170;product=IS1 family transposase;protein_id=WP_233481305.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2477922 2478370 . + 2 ID=cds-WP_233481305.1;Parent=gene-LU604_RS13170;Dbxref=Genbank:WP_233481305.1;Name=WP_233481305.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS13170;product=IS1 family transposase;protein_id=WP_233481305.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2478720 2479874 . + . ID=gene-LU604_RS13175;Name=LU604_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13175;old_locus_tag=LU604_13175 NZ_CP089942.1 Protein Homology CDS 2478720 2479874 . + 0 ID=cds-WP_233478476.1;Parent=gene-LU604_RS13175;Dbxref=Genbank:WP_233478476.1;Name=WP_233478476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156776.1;locus_tag=LU604_RS13175;product=glycosyltransferase;protein_id=WP_233478476.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2479954 2480574 . - . ID=gene-LU604_RS13180;Name=LU604_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13180;old_locus_tag=LU604_13180 NZ_CP089942.1 Protein Homology CDS 2479954 2480574 . - 0 ID=cds-WP_233478477.1;Parent=gene-LU604_RS13180;Dbxref=Genbank:WP_233478477.1;Name=WP_233478477.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005968666.1;locus_tag=LU604_RS13180;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_233478477.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2480589 2481494 . - . ID=gene-LU604_RS13185;Name=LU604_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13185;old_locus_tag=LU604_13185 NZ_CP089942.1 Protein Homology CDS 2480589 2481494 . - 0 ID=cds-WP_040465796.1;Parent=gene-LU604_RS13185;Dbxref=Genbank:WP_040465796.1;Name=WP_040465796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667982.1;locus_tag=LU604_RS13185;product=PHP domain-containing protein;protein_id=WP_040465796.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2481760 2483322 . + . ID=gene-LU604_RS13190;Name=LU604_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13190;old_locus_tag=LU604_13190 NZ_CP089942.1 Protein Homology CDS 2481760 2483322 . + 0 ID=cds-WP_233478478.1;Parent=gene-LU604_RS13190;Dbxref=Genbank:WP_233478478.1;Name=WP_233478478.1;Ontology_term=GO:0009058,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192537.1;locus_tag=LU604_RS13190;product=anthranilate synthase component 1;protein_id=WP_233478478.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2483322 2484914 . + . ID=gene-LU604_RS13195;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=pseudogene;locus_tag=LU604_RS13195;old_locus_tag=LU604_13195;pseudo=true NZ_CP089942.1 Protein Homology CDS 2483322 2484914 . + 0 ID=cds-LU604_RS13195;Parent=gene-LU604_RS13195;Note=internal stop;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226462.1;locus_tag=LU604_RS13195;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2484917 2486278 . + . ID=gene-LU604_RS13200;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=LU604_RS13200;old_locus_tag=LU604_13200 NZ_CP089942.1 Protein Homology CDS 2484917 2486278 . + 0 ID=cds-WP_233478479.1;Parent=gene-LU604_RS13200;Dbxref=Genbank:WP_233478479.1;Name=WP_233478479.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157749.1;locus_tag=LU604_RS13200;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_233478479.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2486329 2487519 . + . ID=gene-LU604_RS13205;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=LU604_RS13205;old_locus_tag=LU604_13205 NZ_CP089942.1 Protein Homology CDS 2486329 2487519 . + 0 ID=cds-WP_016192533.1;Parent=gene-LU604_RS13205;Dbxref=Genbank:WP_016192533.1;Name=WP_016192533.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441339.1;locus_tag=LU604_RS13205;product=tryptophan synthase subunit beta;protein_id=WP_016192533.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2487519 2488325 . + . ID=gene-LU604_RS13210;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=LU604_RS13210;old_locus_tag=LU604_13210 NZ_CP089942.1 Protein Homology CDS 2487519 2488325 . + 0 ID=cds-WP_233480794.1;Parent=gene-LU604_RS13210;Dbxref=Genbank:WP_233480794.1;Name=WP_233480794.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009089939.1;locus_tag=LU604_RS13210;product=tryptophan synthase subunit alpha;protein_id=WP_233480794.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2488483 2488797 . + . ID=gene-LU604_RS13215;Name=LU604_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13215;old_locus_tag=LU604_13215 NZ_CP089942.1 Protein Homology CDS 2488483 2488797 . + 0 ID=cds-WP_016192531.1;Parent=gene-LU604_RS13215;Dbxref=Genbank:WP_016192531.1;Name=WP_016192531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210636.1;locus_tag=LU604_RS13215;product=BON domain-containing protein;protein_id=WP_016192531.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2489387 2489779 . + . ID=gene-LU604_RS13220;Name=LU604_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13220;old_locus_tag=LU604_13220 NZ_CP089942.1 Protein Homology CDS 2489387 2489779 . + 0 ID=cds-WP_016192530.1;Parent=gene-LU604_RS13220;Dbxref=Genbank:WP_016192530.1;Name=WP_016192530.1;Ontology_term=GO:0030254;gbkey=CDS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: protein motif:HMM:NF017719.2;locus_tag=LU604_RS13220;product=CesT family type III secretion system chaperone;protein_id=WP_016192530.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2489790 2491013 . + . ID=gene-LU604_RS13225;Name=LU604_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13225;old_locus_tag=LU604_13225 NZ_CP089942.1 Protein Homology CDS 2489790 2491013 . + 0 ID=cds-WP_233478480.1;Parent=gene-LU604_RS13225;Dbxref=Genbank:WP_233478480.1;Name=WP_233478480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192529.1;locus_tag=LU604_RS13225;product=type III effector;protein_id=WP_233478480.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2491239 2491658 . + . ID=gene-LU604_RS13230;Name=LU604_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13230;old_locus_tag=LU604_13230 NZ_CP089942.1 Protein Homology CDS 2491239 2491658 . + 0 ID=cds-WP_016192528.1;Parent=gene-LU604_RS13230;Dbxref=Genbank:WP_016192528.1;Name=WP_016192528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799875.1;locus_tag=LU604_RS13230;product=YkgJ family cysteine cluster protein;protein_id=WP_016192528.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2491682 2492416 . + . ID=gene-LU604_RS13235;Name=LU604_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13235;old_locus_tag=LU604_13235 NZ_CP089942.1 Protein Homology CDS 2491682 2492416 . + 0 ID=cds-WP_016192527.1;Parent=gene-LU604_RS13235;Dbxref=Genbank:WP_016192527.1;Name=WP_016192527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441335.1;locus_tag=LU604_RS13235;product=YciC family protein;protein_id=WP_016192527.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2492493 2493032 . + . ID=gene-LU604_RS13240;Name=LU604_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13240;old_locus_tag=LU604_13240 NZ_CP089942.1 Protein Homology CDS 2492493 2493032 . + 0 ID=cds-WP_016192526.1;Parent=gene-LU604_RS13240;Dbxref=Genbank:WP_016192526.1;Name=WP_016192526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008106564.1;locus_tag=LU604_RS13240;product=septation protein A;protein_id=WP_016192526.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2493361 2493771 . + . ID=gene-LU604_RS13245;Name=LU604_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13245;old_locus_tag=LU604_13245 NZ_CP089942.1 Protein Homology CDS 2493361 2493771 . + 0 ID=cds-WP_233478481.1;Parent=gene-LU604_RS13245;Dbxref=Genbank:WP_233478481.1;Name=WP_233478481.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037816.2;locus_tag=LU604_RS13245;product=hypothetical protein;protein_id=WP_233478481.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2494017 2494714 . - . ID=gene-LU604_RS13250;Name=LU604_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13250;old_locus_tag=LU604_13250 NZ_CP089942.1 Protein Homology CDS 2494465 2494714 . - 0 ID=cds-WP_233478482.1;Parent=gene-LU604_RS13250;Dbxref=Genbank:WP_233478482.1;Name=WP_233478482.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU604_RS13250;product=IS1 family transposase;protein_id=WP_233478482.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2494017 2494465 . - 2 ID=cds-WP_233478482.1;Parent=gene-LU604_RS13250;Dbxref=Genbank:WP_233478482.1;Name=WP_233478482.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU604_RS13250;product=IS1 family transposase;protein_id=WP_233478482.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2494956 2496149 . - . ID=gene-LU604_RS13255;Name=LU604_RS13255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13255;old_locus_tag=LU604_13255;pseudo=true NZ_CP089942.1 Protein Homology CDS 2494956 2496149 . - 0 ID=cds-LU604_RS13255;Parent=gene-LU604_RS13255;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=LU604_RS13255;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2496223 2496483 . + . ID=gene-LU604_RS13260;Name=LU604_RS13260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13260;old_locus_tag=LU604_13260;partial=true;pseudo=true;start_range=.,2496223 NZ_CP089942.1 Protein Homology CDS 2496223 2496483 . + 0 ID=cds-LU604_RS13260;Parent=gene-LU604_RS13260;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157758.1;locus_tag=LU604_RS13260;partial=true;product=acyl-CoA esterase;pseudo=true;start_range=.,2496223;transl_table=11 NZ_CP089942.1 RefSeq gene 2496556 2497284 . - . ID=gene-LU604_RS13265;Name=LU604_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13265;old_locus_tag=LU604_13265 NZ_CP089942.1 Protein Homology CDS 2496556 2497284 . - 0 ID=cds-WP_016192517.1;Parent=gene-LU604_RS13265;Dbxref=Genbank:WP_016192517.1;Name=WP_016192517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025954.1;locus_tag=LU604_RS13265;product=energy transducer TonB;protein_id=WP_016192517.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2497489 2497785 . + . ID=gene-LU604_RS13270;Name=LU604_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13270;old_locus_tag=LU604_13270 NZ_CP089942.1 Protein Homology CDS 2497489 2497785 . + 0 ID=cds-WP_016192516.1;Parent=gene-LU604_RS13270;Dbxref=Genbank:WP_016192516.1;Name=WP_016192516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009448315.1;locus_tag=LU604_RS13270;product=YciI family protein;protein_id=WP_016192516.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2498054 2499337 . + . ID=gene-LU604_RS13275;Name=LU604_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13275;old_locus_tag=LU604_13275 NZ_CP089942.1 Protein Homology CDS 2498054 2499337 . + 0 ID=cds-WP_040465794.1;Parent=gene-LU604_RS13275;Dbxref=Genbank:WP_040465794.1;Name=WP_040465794.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016903.2;locus_tag=LU604_RS13275;product=hypothetical protein;protein_id=WP_040465794.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2499442 2500650 . + . ID=gene-LU604_RS13280;Name=LU604_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13280;old_locus_tag=LU604_13280 NZ_CP089942.1 Protein Homology CDS 2499442 2500650 . + 0 ID=cds-WP_233481306.1;Parent=gene-LU604_RS13280;Dbxref=Genbank:WP_233481306.1;Name=WP_233481306.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS13280;product=IS256 family transposase;protein_id=WP_233481306.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2501208 2502668 . + . ID=gene-LU604_RS13285;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=LU604_RS13285;old_locus_tag=LU604_13285 NZ_CP089942.1 Protein Homology CDS 2501208 2502668 . + 0 ID=cds-WP_016192514.1;Parent=gene-LU604_RS13285;Dbxref=Genbank:WP_016192514.1;Name=WP_016192514.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=LU604_RS13285;product=cardiolipin synthase;protein_id=WP_016192514.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2502714 2503037 . + . ID=gene-LU604_RS13290;Name=LU604_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13290;old_locus_tag=LU604_13290 NZ_CP089942.1 Protein Homology CDS 2502714 2503037 . + 0 ID=cds-WP_233478483.1;Parent=gene-LU604_RS13290;Dbxref=Genbank:WP_233478483.1;Name=WP_233478483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210649.1;locus_tag=LU604_RS13290;product=HI1450 family dsDNA-mimic protein;protein_id=WP_233478483.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2503265 2504266 . - . ID=gene-LU604_RS13295;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=LU604_RS13295;old_locus_tag=LU604_13295 NZ_CP089942.1 Protein Homology CDS 2503265 2504266 . - 0 ID=cds-WP_233478484.1;Parent=gene-LU604_RS13295;Dbxref=Genbank:WP_233478484.1;Name=WP_233478484.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;gene=oppF;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509339.1;locus_tag=LU604_RS13295;product=murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF;protein_id=WP_233478484.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2504263 2505276 . - . ID=gene-LU604_RS13300;Name=LU604_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13300;old_locus_tag=LU604_13300 NZ_CP089942.1 Protein Homology CDS 2504263 2505276 . - 0 ID=cds-WP_233478485.1;Parent=gene-LU604_RS13300;Dbxref=Genbank:WP_233478485.1;Name=WP_233478485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544383.1;locus_tag=LU604_RS13300;product=ABC transporter ATP-binding protein;protein_id=WP_233478485.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2505287 2506195 . - . ID=gene-LU604_RS13305;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=LU604_RS13305;old_locus_tag=LU604_13305 NZ_CP089942.1 Protein Homology CDS 2505287 2506195 . - 0 ID=cds-WP_233478486.1;Parent=gene-LU604_RS13305;Dbxref=Genbank:WP_233478486.1;Name=WP_233478486.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=LU604_RS13305;product=oligopeptide ABC transporter permease OppC;protein_id=WP_233478486.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2506209 2507129 . - . ID=gene-LU604_RS13310;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=LU604_RS13310;old_locus_tag=LU604_13310 NZ_CP089942.1 Protein Homology CDS 2506209 2507129 . - 0 ID=cds-WP_016192509.1;Parent=gene-LU604_RS13310;Dbxref=Genbank:WP_016192509.1;Name=WP_016192509.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=LU604_RS13310;product=oligopeptide ABC transporter permease OppB;protein_id=WP_016192509.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2507210 2508841 . - . ID=gene-LU604_RS13315;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=LU604_RS13315;old_locus_tag=LU604_13315 NZ_CP089942.1 Protein Homology CDS 2507210 2508841 . - 0 ID=cds-WP_233478487.1;Parent=gene-LU604_RS13315;Dbxref=Genbank:WP_233478487.1;Name=WP_233478487.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675662.1;locus_tag=LU604_RS13315;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_233478487.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2509010 2510632 . - . ID=gene-LU604_RS13320;Name=LU604_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13320;old_locus_tag=LU604_13320 NZ_CP089942.1 Protein Homology CDS 2509010 2510632 . - 0 ID=cds-WP_233478488.1;Parent=gene-LU604_RS13320;Dbxref=Genbank:WP_233478488.1;Name=WP_233478488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192507.1;locus_tag=LU604_RS13320;product=ABC transporter substrate-binding protein;protein_id=WP_233478488.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2511265 2511912 . - . ID=gene-LU604_RS13325;Name=LU604_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13325;old_locus_tag=LU604_13325 NZ_CP089942.1 Protein Homology CDS 2511265 2511912 . - 0 ID=cds-WP_016192506.1;Parent=gene-LU604_RS13325;Dbxref=Genbank:WP_016192506.1;Name=WP_016192506.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013025965.1;locus_tag=LU604_RS13325;product=YchE family NAAT transporter;protein_id=WP_016192506.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2512376 2515054 . + . ID=gene-LU604_RS13330;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=LU604_RS13330;old_locus_tag=LU604_13330 NZ_CP089942.1 Protein Homology CDS 2512376 2515054 . + 0 ID=cds-WP_233478489.1;Parent=gene-LU604_RS13330;Dbxref=Genbank:WP_233478489.1;Name=WP_233478489.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192505.1;locus_tag=LU604_RS13330;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_233478489.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2515298 2515822 . - . ID=gene-LU604_RS13335;Name=LU604_RS13335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13335;old_locus_tag=LU604_13335;partial=true;pseudo=true;start_range=.,2515298 NZ_CP089942.1 Protein Homology CDS 2515298 2515822 . - 0 ID=cds-LU604_RS13335;Parent=gene-LU604_RS13335;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593825.1;locus_tag=LU604_RS13335;partial=true;product=thymidine kinase;pseudo=true;start_range=.,2515298;transl_table=11 NZ_CP089942.1 RefSeq gene 2516330 2516734 . + . ID=gene-LU604_RS13340;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=LU604_RS13340;old_locus_tag=LU604_13340 NZ_CP089942.1 Protein Homology CDS 2516330 2516734 . + 0 ID=cds-WP_016192503.1;Parent=gene-LU604_RS13340;Dbxref=Genbank:WP_016192503.1;Name=WP_016192503.1;gbkey=CDS;gene=hns;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227498.1;locus_tag=LU604_RS13340;product=DNA-binding transcriptional regulator H-NS;protein_id=WP_016192503.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2516788 2517795 . - . ID=gene-LU604_RS13345;Name=LU604_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13345;old_locus_tag=LU604_13345 NZ_CP089942.1 Protein Homology CDS 2516788 2517795 . - 0 ID=cds-WP_016192502.1;Parent=gene-LU604_RS13345;Dbxref=Genbank:WP_016192502.1;Name=WP_016192502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202422.1;locus_tag=LU604_RS13345;product=NAD-dependent epimerase;protein_id=WP_016192502.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2517810 2519150 . - . ID=gene-LU604_RS13350;Name=LU604_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13350;old_locus_tag=LU604_13350 NZ_CP089942.1 Protein Homology CDS 2517810 2519150 . - 0 ID=cds-WP_016192501.1;Parent=gene-LU604_RS13350;Dbxref=Genbank:WP_016192501.1;Name=WP_016192501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157796.1;locus_tag=LU604_RS13350;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=WP_016192501.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2519178 2520086 . - . ID=gene-LU604_RS13355;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=LU604_RS13355;old_locus_tag=LU604_13355 NZ_CP089942.1 Protein Homology CDS 2519178 2520086 . - 0 ID=cds-WP_016192500.1;Parent=gene-LU604_RS13355;Dbxref=Genbank:WP_016192500.1;Name=WP_016192500.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309765.1;locus_tag=LU604_RS13355;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_016192500.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2520281 2521294 . - . ID=gene-LU604_RS13360;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=LU604_RS13360;old_locus_tag=LU604_13360 NZ_CP089942.1 Protein Homology CDS 2520281 2521294 . - 0 ID=cds-WP_016192499.1;Parent=gene-LU604_RS13360;Dbxref=Genbank:WP_016192499.1;Name=WP_016192499.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202425.1;locus_tag=LU604_RS13360;product=two-component system response regulator RssB;protein_id=WP_016192499.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2521398 2522277 . - . ID=gene-LU604_RS13365;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=pseudogene;locus_tag=LU604_RS13365;old_locus_tag=LU604_13365;pseudo=true NZ_CP089942.1 Protein Homology CDS 2521398 2522277 . - 0 ID=cds-LU604_RS13365;Parent=gene-LU604_RS13365;Note=frameshifted%3B internal stop;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001230572.1;locus_tag=LU604_RS13365;product=patatin-like phospholipase RssA;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2522382 2522840 . + . ID=gene-LU604_RS13370;Name=LU604_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13370;old_locus_tag=LU604_13370 NZ_CP089942.1 Protein Homology CDS 2522382 2522840 . + 0 ID=cds-WP_016192495.1;Parent=gene-LU604_RS13370;Dbxref=Genbank:WP_016192495.1;Name=WP_016192495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005968732.1;locus_tag=LU604_RS13370;product=YchJ family protein;protein_id=WP_016192495.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2522887 2523735 . + . ID=gene-LU604_RS13375;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=LU604_RS13375;old_locus_tag=LU604_13375 NZ_CP089942.1 Protein Homology CDS 2522887 2523735 . + 0 ID=cds-WP_233478490.1;Parent=gene-LU604_RS13375;Dbxref=Genbank:WP_233478490.1;Name=WP_233478490.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852258.1;locus_tag=LU604_RS13375;product=formyltetrahydrofolate deformylase;protein_id=WP_233478490.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2523907 2523991 . + . ID=gene-LU604_RS13380;Name=LU604_RS13380;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS13380;old_locus_tag=LU604_13380 NZ_CP089942.1 tRNAscan-SE tRNA 2523907 2523991 . + . ID=rna-LU604_RS13380;Parent=gene-LU604_RS13380;anticodon=(pos:2523941..2523943);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS13380;product=tRNA-Tyr NZ_CP089942.1 tRNAscan-SE exon 2523907 2523991 . + . ID=exon-LU604_RS13380-1;Parent=rna-LU604_RS13380;anticodon=(pos:2523941..2523943);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS13380;product=tRNA-Tyr NZ_CP089942.1 RefSeq gene 2524262 2525068 . + . ID=gene-LU604_RS13385;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=LU604_RS13385;old_locus_tag=LU604_13385 NZ_CP089942.1 Protein Homology CDS 2524262 2525068 . + 0 ID=cds-WP_016192493.1;Parent=gene-LU604_RS13385;Dbxref=Genbank:WP_016192493.1;Name=WP_016192493.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008853;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884424.1;locus_tag=LU604_RS13385;product=exodeoxyribonuclease III;protein_id=WP_016192493.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2525103 2525444 . - . ID=gene-LU604_RS13390;Name=LU604_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13390;old_locus_tag=LU604_13390 NZ_CP089942.1 Protein Homology CDS 2525103 2525444 . - 0 ID=cds-WP_233478491.1;Parent=gene-LU604_RS13390;Dbxref=Genbank:WP_233478491.1;Name=WP_233478491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192492.1;locus_tag=LU604_RS13390;product=DUF1496 domain-containing protein;protein_id=WP_233478491.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2525444 2527354 . - . ID=gene-LU604_RS13395;Name=LU604_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13395;old_locus_tag=LU604_13395 NZ_CP089942.1 Protein Homology CDS 2525444 2527354 . - 0 ID=cds-WP_233478492.1;Parent=gene-LU604_RS13395;Dbxref=Genbank:WP_233478492.1;Name=WP_233478492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192491.1;locus_tag=LU604_RS13395;product=DNA topoisomerase III;protein_id=WP_233478492.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2527625 2528176 . - . ID=gene-LU604_RS13400;Name=LU604_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13400;old_locus_tag=LU604_13400 NZ_CP089942.1 Protein Homology CDS 2527625 2528176 . - 0 ID=cds-WP_233478493.1;Parent=gene-LU604_RS13400;Dbxref=Genbank:WP_233478493.1;Name=WP_233478493.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358057.1;locus_tag=LU604_RS13400;product=NAD(P)H nitroreductase;protein_id=WP_233478493.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2528356 2530212 . + . ID=gene-LU604_RS13405;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=LU604_RS13405;old_locus_tag=LU604_13405 NZ_CP089942.1 Protein Homology CDS 2528356 2530212 . + 0 ID=cds-WP_016192489.1;Parent=gene-LU604_RS13405;Dbxref=Genbank:WP_016192489.1;Name=WP_016192489.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169948.1;locus_tag=LU604_RS13405;product=signal peptide peptidase SppA;protein_id=WP_016192489.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2530282 2531298 . + . ID=gene-LU604_RS13410;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=LU604_RS13410;old_locus_tag=LU604_13410 NZ_CP089942.1 Protein Homology CDS 2530282 2531298 . + 0 ID=cds-WP_233478494.1;Parent=gene-LU604_RS13410;Dbxref=Genbank:WP_233478494.1;Name=WP_233478494.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310501.1;locus_tag=LU604_RS13410;product=asparaginase;protein_id=WP_233478494.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2531310 2531930 . + . ID=gene-LU604_RS13415;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=LU604_RS13415;old_locus_tag=LU604_13415 NZ_CP089942.1 Protein Homology CDS 2531310 2531930 . + 0 ID=cds-WP_016192487.1;Parent=gene-LU604_RS13415;Dbxref=Genbank:WP_016192487.1;Name=WP_016192487.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157812.1;locus_tag=LU604_RS13415;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_016192487.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2531931 2532209 . - . ID=gene-LU604_RS13420;Name=LU604_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13420;old_locus_tag=LU604_13420 NZ_CP089942.1 Protein Homology CDS 2531931 2532209 . - 0 ID=cds-WP_233478495.1;Parent=gene-LU604_RS13420;Dbxref=Genbank:WP_233478495.1;Name=WP_233478495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667943.1;locus_tag=LU604_RS13420;product=DUF1315 family protein;protein_id=WP_233478495.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2532215 2532625 . - . ID=gene-LU604_RS13425;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=LU604_RS13425;old_locus_tag=LU604_13425 NZ_CP089942.1 Protein Homology CDS 2532215 2532625 . - 0 ID=cds-WP_016192485.1;Parent=gene-LU604_RS13425;Dbxref=Genbank:WP_016192485.1;Name=WP_016192485.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202438.1;locus_tag=LU604_RS13425;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_016192485.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2532967 2533962 . + . ID=gene-LU604_RS13430;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=LU604_RS13430;old_locus_tag=LU604_13430 NZ_CP089942.1 Protein Homology CDS 2532967 2533962 . + 0 ID=cds-WP_233478496.1;Parent=gene-LU604_RS13430;Dbxref=Genbank:WP_233478496.1;Name=WP_233478496.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226380.1;locus_tag=LU604_RS13430;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_233478496.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2534370 2535248 . + . ID=gene-LU604_RS13435;Name=LU604_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13435;old_locus_tag=LU604_13435 NZ_CP089942.1 Protein Homology CDS 2534370 2535248 . + 0 ID=cds-WP_233478497.1;Parent=gene-LU604_RS13435;Dbxref=Genbank:WP_233478497.1;Name=WP_233478497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192483.1;locus_tag=LU604_RS13435;product=D-hexose-6-phosphate mutarotase;protein_id=WP_233478497.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2535460 2536160 . + . ID=gene-LU604_RS13440;Name=LU604_RS13440;end_range=2536160,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13440;old_locus_tag=LU604_13440;partial=true;pseudo=true;start_range=.,2535460 NZ_CP089942.1 Protein Homology CDS 2535460 2536160 . + 0 ID=cds-LU604_RS13440;Parent=gene-LU604_RS13440;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2536160,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612066.1;locus_tag=LU604_RS13440;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,2535460;transl_table=11 NZ_CP089942.1 RefSeq gene 2536874 2538808 . + . ID=gene-LU604_RS13445;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=LU604_RS13445;old_locus_tag=LU604_13445 NZ_CP089942.1 Protein Homology CDS 2536874 2538808 . + 0 ID=cds-WP_233481307.1;Parent=gene-LU604_RS13445;Dbxref=Genbank:WP_233481307.1;Name=WP_233481307.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192480.1;locus_tag=LU604_RS13445;product=protein kinase YeaG;protein_id=WP_233481307.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2538880 2540151 . + . ID=gene-LU604_RS13450;Name=LU604_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13450;old_locus_tag=LU604_13450 NZ_CP089942.1 Protein Homology CDS 2538880 2540151 . + 0 ID=cds-WP_233478499.1;Parent=gene-LU604_RS13450;Dbxref=Genbank:WP_233478499.1;Name=WP_233478499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006119424.1;locus_tag=LU604_RS13450;product=YeaH/YhbH family protein;protein_id=WP_233478499.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2540304 2540708 . + . ID=gene-LU604_RS13455;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS13455;old_locus_tag=LU604_13455 NZ_CP089942.1 Protein Homology CDS 2540304 2540708 . + 0 ID=cds-WP_233478500.1;Parent=gene-LU604_RS13455;Dbxref=Genbank:WP_233478500.1;Name=WP_233478500.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190995.1;locus_tag=LU604_RS13455;product=IS200/IS605 family transposase;protein_id=WP_233478500.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2540794 2541087 . - . ID=gene-LU604_RS13460;Name=LU604_RS13460;end_range=2541087,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13460;old_locus_tag=LU604_13460;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2540794 2541087 . - 0 ID=cds-LU604_RS13460;Parent=gene-LU604_RS13460;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2541087,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS13460;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2541188 2541601 . + . ID=gene-LU604_RS13465;Name=LU604_RS13465;end_range=2541601,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13465;old_locus_tag=LU604_13465;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2541188 2541601 . + 0 ID=cds-LU604_RS13465;Parent=gene-LU604_RS13465;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2541601,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS13465;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2541603 2542160 . - . ID=gene-LU604_RS13470;Name=LU604_RS13470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13470;old_locus_tag=LU604_13470;partial=true;pseudo=true;start_range=.,2541603 NZ_CP089942.1 Protein Homology CDS 2541603 2542160 . - 0 ID=cds-LU604_RS13470;Parent=gene-LU604_RS13470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS13470;partial=true;product=transposase;pseudo=true;start_range=.,2541603;transl_table=11 NZ_CP089942.1 RefSeq gene 2542610 2544337 . + . ID=gene-LU604_RS13475;Name=LU604_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13475;old_locus_tag=LU604_13475 NZ_CP089942.1 Protein Homology CDS 2542610 2544337 . + 0 ID=cds-WP_016192477.1;Parent=gene-LU604_RS13475;Dbxref=Genbank:WP_016192477.1;Name=WP_016192477.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0005451,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105126.1;locus_tag=LU604_RS13475;product=potassium/proton antiporter;protein_id=WP_016192477.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2544822 2546021 . + . ID=gene-LU604_RS13480;Name=LU604_RS13480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13480;old_locus_tag=LU604_13480;pseudo=true NZ_CP089942.1 Protein Homology CDS 2544822 2546021 . + 0 ID=cds-LU604_RS13480;Parent=gene-LU604_RS13480;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS13480;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2546198 2546404 . + . ID=gene-LU604_RS13485;Name=LU604_RS13485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13485;old_locus_tag=LU604_13485;partial=true;pseudo=true;start_range=.,2546198 NZ_CP089942.1 Protein Homology CDS 2546198 2546404 . + 0 ID=cds-LU604_RS13485;Parent=gene-LU604_RS13485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105124.1;locus_tag=LU604_RS13485;partial=true;product=sugar transferase;pseudo=true;start_range=.,2546198;transl_table=11 NZ_CP089942.1 RefSeq gene 2546533 2547708 . + . ID=gene-LU604_RS13490;Name=LU604_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13490;old_locus_tag=LU604_13490 NZ_CP089942.1 Protein Homology CDS 2546533 2547708 . + 0 ID=cds-WP_233478501.1;Parent=gene-LU604_RS13490;Dbxref=Genbank:WP_233478501.1;Name=WP_233478501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192471.1;locus_tag=LU604_RS13490;product=multidrug effflux MFS transporter;protein_id=WP_233478501.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2547756 2548196 . - . ID=gene-LU604_RS13495;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS13495;old_locus_tag=LU604_13495;partial=true;pseudo=true;start_range=.,2547756 NZ_CP089942.1 Protein Homology CDS 2547756 2548196 . - 0 ID=cds-LU604_RS13495;Parent=gene-LU604_RS13495;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000525033.1;locus_tag=LU604_RS13495;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,2547756;transl_table=11 NZ_CP089942.1 RefSeq gene 2548350 2549420 . - . ID=gene-LU604_RS13500;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=LU604_RS13500;old_locus_tag=LU604_13500 NZ_CP089942.1 Protein Homology CDS 2548350 2549420 . - 0 ID=cds-WP_233478502.1;Parent=gene-LU604_RS13500;Dbxref=Genbank:WP_233478502.1;Name=WP_233478502.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192469.1;locus_tag=LU604_RS13500;product=catabolic alanine racemase DadX;protein_id=WP_233478502.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2549448 2550743 . - . ID=gene-LU604_RS13505;Name=LU604_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13505;old_locus_tag=LU604_13505 NZ_CP089942.1 Protein Homology CDS 2549448 2550743 . - 0 ID=cds-WP_233478503.1;Parent=gene-LU604_RS13505;Dbxref=Genbank:WP_233478503.1;Name=WP_233478503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008110371.1;locus_tag=LU604_RS13505;product=D-amino acid dehydrogenase;protein_id=WP_233478503.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2551246 2552781 . + . ID=gene-LU604_RS13510;Name=LU604_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13510;old_locus_tag=LU604_13510 NZ_CP089942.1 Protein Homology CDS 2551246 2552781 . + 0 ID=cds-WP_233478504.1;Parent=gene-LU604_RS13510;Dbxref=Genbank:WP_233478504.1;Name=WP_233478504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010260586.1;locus_tag=LU604_RS13510;product=SpoVR family protein;protein_id=WP_233478504.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2552834 2553544 . - . ID=gene-LU604_RS13515;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=LU604_RS13515;old_locus_tag=LU604_13515 NZ_CP089942.1 Protein Homology CDS 2552834 2553544 . - 0 ID=cds-WP_016192466.1;Parent=gene-LU604_RS13515;Dbxref=Genbank:WP_016192466.1;Name=WP_016192466.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010260584.1;locus_tag=LU604_RS13515;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_016192466.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2553850 2554380 . + . ID=gene-LU604_RS13520;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=LU604_RS13520;old_locus_tag=LU604_13520 NZ_CP089942.1 Protein Homology CDS 2553850 2554380 . + 0 ID=cds-WP_016192465.1;Parent=gene-LU604_RS13520;Dbxref=Genbank:WP_016192465.1;Name=WP_016192465.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078485.1;locus_tag=LU604_RS13520;product=disulfide bond formation protein DsbB;protein_id=WP_016192465.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2555112 2555806 . + . ID=gene-LU604_RS13525;Name=LU604_RS13525;end_range=2555806,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13525;old_locus_tag=LU604_13525;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2555112 2555806 . + 0 ID=cds-LU604_RS13525;Parent=gene-LU604_RS13525;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2555806,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS13525;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2555884 2556581 . + . ID=gene-LU604_RS13530;Name=LU604_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13530;old_locus_tag=LU604_13530 NZ_CP089942.1 Protein Homology CDS 2555884 2556133 . + 0 ID=cds-WP_233478505.1;Parent=gene-LU604_RS13530;Dbxref=Genbank:WP_233478505.1;Name=WP_233478505.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS13530;product=IS1 family transposase;protein_id=WP_233478505.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2556133 2556581 . + 2 ID=cds-WP_233478505.1;Parent=gene-LU604_RS13530;Dbxref=Genbank:WP_233478505.1;Name=WP_233478505.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS13530;product=IS1 family transposase;protein_id=WP_233478505.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2556846 2557289 . - . ID=gene-LU604_RS13535;Name=LU604_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13535;old_locus_tag=LU604_13535 NZ_CP089942.1 Protein Homology CDS 2556846 2557289 . - 0 ID=cds-WP_016192461.1;Parent=gene-LU604_RS13535;Dbxref=Genbank:WP_016192461.1;Name=WP_016192461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202455.1;locus_tag=LU604_RS13535;product=YcgN family cysteine cluster protein;protein_id=WP_016192461.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2557353 2558012 . - . ID=gene-LU604_RS13540;Name=LU604_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13540;old_locus_tag=LU604_13540 NZ_CP089942.1 Protein Homology CDS 2557353 2558012 . - 0 ID=cds-WP_233478506.1;Parent=gene-LU604_RS13540;Dbxref=Genbank:WP_233478506.1;Name=WP_233478506.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309702.1;locus_tag=LU604_RS13540;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_233478506.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2558261 2558536 . - . ID=gene-LU604_RS13545;Name=LU604_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13545;old_locus_tag=LU604_13545 NZ_CP089942.1 Protein Homology CDS 2558261 2558536 . - 0 ID=cds-WP_016192459.1;Parent=gene-LU604_RS13545;Dbxref=Genbank:WP_016192459.1;Name=WP_016192459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964089.1;locus_tag=LU604_RS13545;product=YcgL domain-containing protein;protein_id=WP_016192459.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2558694 2559386 . + . ID=gene-LU604_RS13550;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=LU604_RS13550;old_locus_tag=LU604_13550 NZ_CP089942.1 Protein Homology CDS 2558694 2559386 . + 0 ID=cds-WP_233478507.1;Parent=gene-LU604_RS13550;Dbxref=Genbank:WP_233478507.1;Name=WP_233478507.1;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544415.1;locus_tag=LU604_RS13550;product=septum site-determining protein MinC;protein_id=WP_233478507.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2559426 2560238 . + . ID=gene-LU604_RS13555;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=LU604_RS13555;old_locus_tag=LU604_13555 NZ_CP089942.1 Protein Homology CDS 2559426 2560238 . + 0 ID=cds-WP_016192457.1;Parent=gene-LU604_RS13555;Dbxref=Genbank:WP_016192457.1;Name=WP_016192457.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=LU604_RS13555;product=septum site-determining protein MinD;protein_id=WP_016192457.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2560242 2560511 . + . ID=gene-LU604_RS13560;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=LU604_RS13560;old_locus_tag=LU604_13560 NZ_CP089942.1 Protein Homology CDS 2560242 2560511 . + 0 ID=cds-WP_016192456.1;Parent=gene-LU604_RS13560;Dbxref=Genbank:WP_016192456.1;Name=WP_016192456.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015840174.1;locus_tag=LU604_RS13560;product=cell division topological specificity factor MinE;protein_id=WP_016192456.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2560563 2561681 . - . ID=gene-LU604_RS13565;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=LU604_RS13565;old_locus_tag=LU604_13565 NZ_CP089942.1 Protein Homology CDS 2560563 2561681 . - 0 ID=cds-WP_016192455.1;Parent=gene-LU604_RS13565;Dbxref=Genbank:WP_016192455.1;Name=WP_016192455.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020454072.1;locus_tag=LU604_RS13565;product=ribonuclease D;protein_id=WP_016192455.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2561780 2563452 . - . ID=gene-LU604_RS13570;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=pseudogene;locus_tag=LU604_RS13570;old_locus_tag=LU604_13570;pseudo=true NZ_CP089942.1 Protein Homology CDS 2561780 2563452 . - 0 ID=cds-LU604_RS13570;Parent=gene-LU604_RS13570;Note=frameshifted%3B internal stop;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083204.1;locus_tag=LU604_RS13570;product=long-chain-fatty-acid--CoA ligase FadD;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2563666 2564262 . - . ID=gene-LU604_RS13575;Name=LU604_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13575;old_locus_tag=LU604_13575 NZ_CP089942.1 Protein Homology CDS 2563666 2564262 . - 0 ID=cds-WP_016192454.1;Parent=gene-LU604_RS13575;Dbxref=Genbank:WP_016192454.1;Name=WP_016192454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202464.1;locus_tag=LU604_RS13575;product=Slp family lipoprotein;protein_id=WP_016192454.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2564377 2565075 . - . ID=gene-LU604_RS13580;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=LU604_RS13580;old_locus_tag=LU604_13580 NZ_CP089942.1 Protein Homology CDS 2564377 2565075 . - 0 ID=cds-WP_016192453.1;Parent=gene-LU604_RS13580;Dbxref=Genbank:WP_016192453.1;Name=WP_016192453.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016161378.1;locus_tag=LU604_RS13580;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_016192453.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2565136 2567046 . - . ID=gene-LU604_RS13585;Name=LU604_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13585;old_locus_tag=LU604_13585 NZ_CP089942.1 Protein Homology CDS 2565136 2567046 . - 0 ID=cds-WP_233478508.1;Parent=gene-LU604_RS13585;Dbxref=Genbank:WP_233478508.1;Name=WP_233478508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169977.1;locus_tag=LU604_RS13585;product=ATP-dependent DNA helicase;protein_id=WP_233478508.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2567323 2567667 . + . ID=gene-LU604_RS13590;Name=LU604_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13590;old_locus_tag=LU604_13590 NZ_CP089942.1 Protein Homology CDS 2567323 2567667 . + 0 ID=cds-WP_016192451.1;Parent=gene-LU604_RS13590;Dbxref=Genbank:WP_016192451.1;Name=WP_016192451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009089831.1;locus_tag=LU604_RS13590;product=RidA family protein;protein_id=WP_016192451.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2567677 2568321 . - . ID=gene-LU604_RS13595;Name=LU604_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13595;old_locus_tag=LU604_13595 NZ_CP089942.1 GeneMarkS-2+ CDS 2567677 2568321 . - 0 ID=cds-WP_016192450.1;Parent=gene-LU604_RS13595;Dbxref=Genbank:WP_016192450.1;Name=WP_016192450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS13595;product=hypothetical protein;protein_id=WP_016192450.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2568444 2568647 . - . ID=gene-LU604_RS13600;Name=LU604_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13600;old_locus_tag=LU604_13600 NZ_CP089942.1 GeneMarkS-2+ CDS 2568444 2568647 . - 0 ID=cds-WP_152664151.1;Parent=gene-LU604_RS13600;Dbxref=Genbank:WP_152664151.1;Name=WP_152664151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS13600;product=hypothetical protein;protein_id=WP_152664151.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2568685 2568870 . - . ID=gene-LU604_RS13605;Name=LU604_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13605;old_locus_tag=LU604_13605 NZ_CP089942.1 Protein Homology CDS 2568685 2568870 . - 0 ID=cds-WP_016192448.1;Parent=gene-LU604_RS13605;Dbxref=Genbank:WP_016192448.1;Name=WP_016192448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366046.1;locus_tag=LU604_RS13605;product=YoaH family protein;protein_id=WP_016192448.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2568982 2570346 . + . ID=gene-LU604_RS13610;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=LU604_RS13610;old_locus_tag=LU604_13610 NZ_CP089942.1 Protein Homology CDS 2568982 2570346 . + 0 ID=cds-WP_233478509.1;Parent=gene-LU604_RS13610;Dbxref=Genbank:WP_233478509.1;Name=WP_233478509.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192447.1;locus_tag=LU604_RS13610;product=aminodeoxychorismate synthase component 1;protein_id=WP_233478509.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2570339 2570912 . + . ID=gene-LU604_RS13615;Name=LU604_RS13615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13615;old_locus_tag=LU604_13615;pseudo=true NZ_CP089942.1 Protein Homology CDS 2570339 2570912 . + 0 ID=cds-LU604_RS13615;Parent=gene-LU604_RS13615;Note=frameshifted;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,CoA pyrophosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202472.1;locus_tag=LU604_RS13615;product=CoA pyrophosphatase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2571278 2572642 . + . ID=gene-LU604_RS13620;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=LU604_RS13620;old_locus_tag=LU604_13620 NZ_CP089942.1 Protein Homology CDS 2571278 2572642 . + 0 ID=cds-WP_233478510.1;Parent=gene-LU604_RS13620;Dbxref=Genbank:WP_233478510.1;Name=WP_233478510.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227643.1;locus_tag=LU604_RS13620;product=L-serine ammonia-lyase;protein_id=WP_233478510.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2572887 2574449 . + . ID=gene-LU604_RS13625;Name=LU604_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13625;old_locus_tag=LU604_13625 NZ_CP089942.1 Protein Homology CDS 2572887 2574449 . + 0 ID=cds-WP_233478511.1;Parent=gene-LU604_RS13625;Dbxref=Genbank:WP_233478511.1;Name=WP_233478511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192648.1;locus_tag=LU604_RS13625;product=cyclic diguanylate phosphodiesterase;protein_id=WP_233478511.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2574680 2576245 . - . ID=gene-LU604_RS13630;Name=LU604_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13630;old_locus_tag=LU604_13630 NZ_CP089942.1 Protein Homology CDS 2574680 2576245 . - 0 ID=cds-WP_016192649.1;Parent=gene-LU604_RS13630;Dbxref=Genbank:WP_016192649.1;Name=WP_016192649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202475.1;locus_tag=LU604_RS13630;product=TerC family protein;protein_id=WP_016192649.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2577074 2577901 . - . ID=gene-LU604_RS13635;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=LU604_RS13635;old_locus_tag=LU604_13635 NZ_CP089942.1 Protein Homology CDS 2577074 2577901 . - 0 ID=cds-WP_016192650.1;Parent=gene-LU604_RS13635;Dbxref=Genbank:WP_016192650.1;Name=WP_016192650.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007668597.1;locus_tag=LU604_RS13635;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_016192650.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2577976 2578164 . - . ID=gene-LU604_RS13640;Name=LU604_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13640;old_locus_tag=LU604_13640 NZ_CP089942.1 GeneMarkS-2+ CDS 2577976 2578164 . - 0 ID=cds-WP_152664197.1;Parent=gene-LU604_RS13640;Dbxref=Genbank:WP_152664197.1;Name=WP_152664197.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS13640;product=hypothetical protein;protein_id=WP_152664197.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2578398 2578607 . - . ID=gene-LU604_RS13645;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=LU604_RS13645;old_locus_tag=LU604_13645 NZ_CP089942.1 Protein Homology CDS 2578398 2578607 . - 0 ID=cds-WP_001062678.1;Parent=gene-LU604_RS13645;Dbxref=Genbank:WP_001062678.1;Name=WP_001062678.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=LU604_RS13645;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2579284 2580269 . - . ID=gene-LU604_RS13650;Name=LU604_RS13650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13650;old_locus_tag=LU604_13650;pseudo=true NZ_CP089942.1 Protein Homology CDS 2579284 2580269 . - 0 ID=cds-LU604_RS13650;Parent=gene-LU604_RS13650;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667910.1;locus_tag=LU604_RS13650;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2580291 2580551 . - . ID=gene-LU604_RS13655;Name=LU604_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13655;old_locus_tag=LU604_13655 NZ_CP089942.1 Protein Homology CDS 2580291 2580551 . - 0 ID=cds-WP_233478512.1;Parent=gene-LU604_RS13655;Dbxref=Genbank:WP_233478512.1;Name=WP_233478512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202483.1;locus_tag=LU604_RS13655;product=YebO family protein;protein_id=WP_233478512.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2580789 2581025 . + . ID=gene-LU604_RS13660;Name=LU604_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13660;old_locus_tag=LU604_13660 NZ_CP089942.1 Protein Homology CDS 2580789 2581025 . + 0 ID=cds-WP_020323236.1;Parent=gene-LU604_RS13660;Dbxref=Genbank:WP_020323236.1;Name=WP_020323236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157886.1;locus_tag=LU604_RS13660;product=YobH family protein;protein_id=WP_020323236.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2581061 2581852 . - . ID=gene-LU604_RS13665;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=LU604_RS13665;old_locus_tag=LU604_13665 NZ_CP089942.1 Protein Homology CDS 2581061 2581852 . - 0 ID=cds-WP_233478513.1;Parent=gene-LU604_RS13665;Dbxref=Genbank:WP_233478513.1;Name=WP_233478513.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323237.1;locus_tag=LU604_RS13665;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_233478513.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2582046 2583422 . + . ID=gene-LU604_RS13670;Name=LU604_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13670;old_locus_tag=LU604_13670 NZ_CP089942.1 Protein Homology CDS 2582046 2583422 . + 0 ID=cds-WP_046372025.1;Parent=gene-LU604_RS13670;Dbxref=Genbank:WP_046372025.1;Name=WP_046372025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202486.1;locus_tag=LU604_RS13670;product=MFS transporter;protein_id=WP_046372025.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2583488 2584369 . - . ID=gene-LU604_RS13675;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=LU604_RS13675;old_locus_tag=LU604_13675 NZ_CP089942.1 Protein Homology CDS 2583488 2584369 . - 0 ID=cds-WP_233478514.1;Parent=gene-LU604_RS13675;Dbxref=Genbank:WP_233478514.1;Name=WP_233478514.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=LU604_RS13675;product=protease HtpX;protein_id=WP_233478514.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2584606 2584992 . - . ID=gene-LU604_RS13680;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS13680;old_locus_tag=LU604_13680;pseudo=true NZ_CP089942.1 Protein Homology CDS 2584606 2584992 . - 0 ID=cds-LU604_RS13680;Parent=gene-LU604_RS13680;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU604_RS13680;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2585357 2587396 . - . ID=gene-LU604_RS13685;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=LU604_RS13685;old_locus_tag=LU604_13685 NZ_CP089942.1 Protein Homology CDS 2585357 2587396 . - 0 ID=cds-WP_233478515.1;Parent=gene-LU604_RS13685;Dbxref=Genbank:WP_233478515.1;Name=WP_233478515.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358110.1;locus_tag=LU604_RS13685;product=carboxy terminal-processing peptidase;protein_id=WP_233478515.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2587416 2588102 . - . ID=gene-LU604_RS13690;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=LU604_RS13690;old_locus_tag=LU604_13690 NZ_CP089942.1 Protein Homology CDS 2587416 2588102 . - 0 ID=cds-WP_020323243.1;Parent=gene-LU604_RS13690;Dbxref=Genbank:WP_020323243.1;Name=WP_020323243.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157889.1;locus_tag=LU604_RS13690;product=RNA chaperone ProQ;protein_id=WP_020323243.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2588199 2588699 . - . ID=gene-LU604_RS13695;Name=LU604_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13695;old_locus_tag=LU604_13695 NZ_CP089942.1 Protein Homology CDS 2588199 2588699 . - 0 ID=cds-WP_040465820.1;Parent=gene-LU604_RS13695;Dbxref=Genbank:WP_040465820.1;Name=WP_040465820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010258773.1;locus_tag=LU604_RS13695;product=GAF domain-containing protein;protein_id=WP_040465820.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2589093 2590403 . + . ID=gene-LU604_RS13700;Name=LU604_RS13700;end_range=2590403,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13700;old_locus_tag=LU604_13700;partial=true;pseudo=true;start_range=.,2589093 NZ_CP089942.1 Protein Homology CDS 2589093 2590403 . + 0 ID=cds-LU604_RS13700;Parent=gene-LU604_RS13700;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2590403,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001326728.1;locus_tag=LU604_RS13700;partial=true;product=MlaD family protein;pseudo=true;start_range=.,2589093;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2590620 2590915 . + . ID=gene-LU604_RS13705;Name=LU604_RS13705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13705;old_locus_tag=LU604_13705;pseudo=true NZ_CP089942.1 Protein Homology CDS 2590620 2590915 . + 0 ID=cds-LU604_RS13705;Parent=gene-LU604_RS13705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012815406.1;locus_tag=LU604_RS13705;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2590906 2591253 . + . ID=gene-LU604_RS13710;Name=LU604_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13710;old_locus_tag=LU604_13710 NZ_CP089942.1 Protein Homology CDS 2590906 2591253 . + 0 ID=cds-WP_020323248.1;Parent=gene-LU604_RS13710;Dbxref=Genbank:WP_020323248.1;Name=WP_020323248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014728194.1;locus_tag=LU604_RS13710;product=DUF1493 family protein;protein_id=WP_020323248.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2591314 2591457 . - . ID=gene-LU604_RS13715;Name=LU604_RS13715;end_range=2591457,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13715;old_locus_tag=LU604_13715;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2591314 2591457 . - 0 ID=cds-LU604_RS13715;Parent=gene-LU604_RS13715;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2591457,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001031907.1;locus_tag=LU604_RS13715;partial=true;product=DUF2184 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2591419 2591556 . + . ID=gene-LU604_RS13720;Name=LU604_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13720;old_locus_tag=LU604_13720 NZ_CP089942.1 Protein Homology CDS 2591419 2591556 . + 0 ID=cds-WP_020323249.1;Parent=gene-LU604_RS13720;Dbxref=Genbank:WP_020323249.1;Name=WP_020323249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004961893.1;locus_tag=LU604_RS13720;product=phage integrase;protein_id=WP_020323249.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2591802 2592152 . - . ID=gene-LU604_RS13725;Name=LU604_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13725;old_locus_tag=LU604_13725 NZ_CP089942.1 Protein Homology CDS 2591802 2592152 . - 0 ID=cds-WP_020323251.1;Parent=gene-LU604_RS13725;Dbxref=Genbank:WP_020323251.1;Name=WP_020323251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008453983.1;locus_tag=LU604_RS13725;product=YebY family protein;protein_id=WP_020323251.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2592207 2593082 . - . ID=gene-LU604_RS13730;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=LU604_RS13730;old_locus_tag=LU604_13730 NZ_CP089942.1 Protein Homology CDS 2592207 2593082 . - 0 ID=cds-WP_020323252.1;Parent=gene-LU604_RS13730;Dbxref=Genbank:WP_020323252.1;Name=WP_020323252.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202502.1;locus_tag=LU604_RS13730;product=copper homeostasis membrane protein CopD;protein_id=WP_020323252.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2593084 2593455 . - . ID=gene-LU604_RS13735;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=LU604_RS13735;old_locus_tag=LU604_13735 NZ_CP089942.1 Protein Homology CDS 2593084 2593455 . - 0 ID=cds-WP_233478517.1;Parent=gene-LU604_RS13735;Dbxref=Genbank:WP_233478517.1;Name=WP_233478517.1;Ontology_term=GO:0006825,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323253.1;locus_tag=LU604_RS13735;product=CopC domain-containing protein YobA;protein_id=WP_233478517.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2593616 2593846 . + . ID=gene-LU604_RS13740;Name=LU604_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13740;old_locus_tag=LU604_13740 NZ_CP089942.1 Protein Homology CDS 2593616 2593846 . + 0 ID=cds-WP_020323254.1;Parent=gene-LU604_RS13740;Dbxref=Genbank:WP_020323254.1;Name=WP_020323254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916763.1;locus_tag=LU604_RS13740;product=DNA polymerase III subunit theta;protein_id=WP_020323254.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2593931 2594692 . + . ID=gene-LU604_RS13745;Name=LU604_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13745;old_locus_tag=LU604_13745 NZ_CP089942.1 Protein Homology CDS 2593931 2594692 . + 0 ID=cds-WP_233478518.1;Parent=gene-LU604_RS13745;Dbxref=Genbank:WP_233478518.1;Name=WP_233478518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323255.1;locus_tag=LU604_RS13745;product=carbon-nitrogen hydrolase family protein;protein_id=WP_233478518.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2594697 2595383 . + . ID=gene-LU604_RS13750;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=LU604_RS13750;old_locus_tag=LU604_13750 NZ_CP089942.1 Protein Homology CDS 2594697 2595383 . + 0 ID=cds-WP_020323256.1;Parent=gene-LU604_RS13750;Dbxref=Genbank:WP_020323256.1;Name=WP_020323256.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157914.1;locus_tag=LU604_RS13750;product=exodeoxyribonuclease X;protein_id=WP_020323256.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2595454 2597532 . - . ID=gene-LU604_RS13755;Name=LU604_RS13755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13755;old_locus_tag=LU604_13755;pseudo=true NZ_CP089942.1 Protein Homology CDS 2595454 2597532 . - 0 ID=cds-LU604_RS13755;Parent=gene-LU604_RS13755;Note=internal stop;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441243.1;locus_tag=LU604_RS13755;product=prolyl oligopeptidase family serine peptidase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2597658 2598311 . - . ID=gene-LU604_RS13760;Name=LU604_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13760;old_locus_tag=LU604_13760 NZ_CP089942.1 Protein Homology CDS 2597658 2598311 . - 0 ID=cds-WP_233480795.1;Parent=gene-LU604_RS13760;Dbxref=Genbank:WP_233480795.1;Name=WP_233480795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323257.1;locus_tag=LU604_RS13760;product=DUF533 domain-containing protein;protein_id=WP_233480795.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2598614 2598817 . + . ID=gene-LU604_RS13765;Name=LU604_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13765;old_locus_tag=LU604_13765 NZ_CP089942.1 GeneMarkS-2+ CDS 2598614 2598817 . + 0 ID=cds-WP_233478519.1;Parent=gene-LU604_RS13765;Dbxref=Genbank:WP_233478519.1;Name=WP_233478519.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS13765;product=hypothetical protein;protein_id=WP_233478519.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2598820 2598978 . + . ID=gene-LU604_RS13770;Name=LU604_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13770;old_locus_tag=LU604_13770 NZ_CP089942.1 GeneMarkS-2+ CDS 2598820 2598978 . + 0 ID=cds-WP_233478520.1;Parent=gene-LU604_RS13770;Dbxref=Genbank:WP_233478520.1;Name=WP_233478520.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS13770;product=hypothetical protein;protein_id=WP_233478520.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2599053 2599397 . + . ID=gene-LU604_RS13775;Name=LU604_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13775;old_locus_tag=LU604_13775 NZ_CP089942.1 Protein Homology CDS 2599053 2599397 . + 0 ID=cds-WP_233480796.1;Parent=gene-LU604_RS13775;Dbxref=Genbank:WP_233480796.1;Name=WP_233480796.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013429.2;locus_tag=LU604_RS13775;product=hypothetical protein;protein_id=WP_233480796.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2599465 2599827 . - . ID=gene-LU604_RS13780;Name=LU604_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13780;old_locus_tag=LU604_13780 NZ_CP089942.1 Protein Homology CDS 2599465 2599827 . - 0 ID=cds-WP_020323258.1;Parent=gene-LU604_RS13780;Dbxref=Genbank:WP_020323258.1;Name=WP_020323258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009634990.1;locus_tag=LU604_RS13780;product=YebG family protein;protein_id=WP_020323258.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2599967 2601145 . + . ID=gene-LU604_RS13785;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=LU604_RS13785;old_locus_tag=LU604_13785 NZ_CP089942.1 Protein Homology CDS 2599967 2601145 . + 0 ID=cds-WP_233478521.1;Parent=gene-LU604_RS13785;Dbxref=Genbank:WP_233478521.1;Name=WP_233478521.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120282.1;locus_tag=LU604_RS13785;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_233478521.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2601391 2602029 . - . ID=gene-LU604_RS13790;Name=LU604_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13790;old_locus_tag=LU604_13790 NZ_CP089942.1 Protein Homology CDS 2601391 2602029 . - 0 ID=cds-WP_020323260.1;Parent=gene-LU604_RS13790;Dbxref=Genbank:WP_020323260.1;Name=WP_020323260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948904.1;locus_tag=LU604_RS13790;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_020323260.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2602317 2603792 . - . ID=gene-LU604_RS13795;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=LU604_RS13795;old_locus_tag=LU604_13795 NZ_CP089942.1 Protein Homology CDS 2602317 2603792 . - 0 ID=cds-WP_233478522.1;Parent=gene-LU604_RS13795;Dbxref=Genbank:WP_233478522.1;Name=WP_233478522.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=LU604_RS13795;product=glucose-6-phosphate dehydrogenase;protein_id=WP_233478522.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2604154 2605032 . + . ID=gene-LU604_RS13800;Name=LU604_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13800;old_locus_tag=LU604_13800 NZ_CP089942.1 Protein Homology CDS 2604154 2605032 . + 0 ID=cds-WP_233478523.1;Parent=gene-LU604_RS13800;Dbxref=Genbank:WP_233478523.1;Name=WP_233478523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323262.1;locus_tag=LU604_RS13800;product=MurR/RpiR family transcriptional regulator;protein_id=WP_233478523.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2605136 2606578 . + . ID=gene-LU604_RS13805;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=LU604_RS13805;old_locus_tag=LU604_13805 NZ_CP089942.1 Protein Homology CDS 2605136 2606578 . + 0 ID=cds-WP_233478524.1;Parent=gene-LU604_RS13805;Dbxref=Genbank:WP_233478524.1;Name=WP_233478524.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416368.1;locus_tag=LU604_RS13805;product=pyruvate kinase;protein_id=WP_233478524.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2606674 2607048 . + . ID=gene-LU604_RS13810;Name=LU604_RS13810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13810;old_locus_tag=LU604_13810;partial=true;pseudo=true;start_range=.,2606674 NZ_CP089942.1 Protein Homology CDS 2606674 2607048 . + 0 ID=cds-LU604_RS13810;Parent=gene-LU604_RS13810;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160308.1;locus_tag=LU604_RS13810;partial=true;product=transcriptional regulator;pseudo=true;start_range=.,2606674;transl_table=11 NZ_CP089942.1 RefSeq gene 2607141 2608376 . + . ID=gene-LU604_RS13815;Name=LU604_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13815;old_locus_tag=LU604_13815 NZ_CP089942.1 Protein Homology CDS 2607141 2608376 . + 0 ID=cds-WP_233481308.1;Parent=gene-LU604_RS13815;Dbxref=Genbank:WP_233481308.1;Name=WP_233481308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323265.1;locus_tag=LU604_RS13815;product=MFS transporter;protein_id=WP_233481308.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2608556 2609527 . - . ID=gene-LU604_RS13820;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=LU604_RS13820;old_locus_tag=LU604_13820 NZ_CP089942.1 Protein Homology CDS 2608556 2609527 . - 0 ID=cds-WP_233478526.1;Parent=gene-LU604_RS13820;Dbxref=Genbank:WP_233478526.1;Name=WP_233478526.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009245,GO:0016746;gbkey=CDS;gene=lpxM;go_function=acyltransferase activity|0016746||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105099.1;locus_tag=LU604_RS13820;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_233478526.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2610149 2611477 . - . ID=gene-LU604_RS13825;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=LU604_RS13825;old_locus_tag=LU604_13825 NZ_CP089942.1 Protein Homology CDS 2610149 2611477 . - 0 ID=cds-WP_233478527.1;Parent=gene-LU604_RS13825;Dbxref=Genbank:WP_233478527.1;Name=WP_233478527.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323268.1;locus_tag=LU604_RS13825;product=murein DD-endopeptidase MepM;protein_id=WP_233478527.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2611489 2612436 . - . ID=gene-LU604_RS13830;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=LU604_RS13830;old_locus_tag=LU604_13830 NZ_CP089942.1 Protein Homology CDS 2611489 2612436 . - 0 ID=cds-WP_233478528.1;Parent=gene-LU604_RS13830;Dbxref=Genbank:WP_233478528.1;Name=WP_233478528.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323269.1;locus_tag=LU604_RS13830;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_233478528.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2612514 2613266 . + . ID=gene-LU604_RS13835;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=LU604_RS13835;old_locus_tag=LU604_13835 NZ_CP089942.1 Protein Homology CDS 2612514 2613266 . + 0 ID=cds-WP_020323270.1;Parent=gene-LU604_RS13835;Dbxref=Genbank:WP_020323270.1;Name=WP_020323270.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008453942.1;locus_tag=LU604_RS13835;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_020323270.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2613263 2614048 . + . ID=gene-LU604_RS13840;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=LU604_RS13840;old_locus_tag=LU604_13840 NZ_CP089942.1 Protein Homology CDS 2613263 2614048 . + 0 ID=cds-WP_233478529.1;Parent=gene-LU604_RS13840;Dbxref=Genbank:WP_233478529.1;Name=WP_233478529.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017346518.1;locus_tag=LU604_RS13840;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_233478529.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2614559 2615563 . - . ID=gene-LU604_RS13845;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=LU604_RS13845;old_locus_tag=LU604_13845 NZ_CP089942.1 Protein Homology CDS 2614559 2615563 . - 0 ID=cds-WP_233478530.1;Parent=gene-LU604_RS13845;Dbxref=Genbank:WP_233478530.1;Name=WP_233478530.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013026077.1;locus_tag=LU604_RS13845;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_233478530.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2615572 2616189 . - . ID=gene-LU604_RS13850;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=LU604_RS13850;old_locus_tag=LU604_13850 NZ_CP089942.1 Protein Homology CDS 2615572 2616189 . - 0 ID=cds-WP_233478531.1;Parent=gene-LU604_RS13850;Dbxref=Genbank:WP_233478531.1;Name=WP_233478531.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460852.1;locus_tag=LU604_RS13850;product=Holliday junction branch migration protein RuvA;protein_id=WP_233478531.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2616315 2616839 . - . ID=gene-LU604_RS13855;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=LU604_RS13855;old_locus_tag=LU604_13855 NZ_CP089942.1 Protein Homology CDS 2616315 2616839 . - 0 ID=cds-WP_233480797.1;Parent=gene-LU604_RS13855;Dbxref=Genbank:WP_233480797.1;Name=WP_233480797.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323274.1;locus_tag=LU604_RS13855;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_233480797.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2616871 2617614 . - . ID=gene-LU604_RS13860;Name=LU604_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13860;old_locus_tag=LU604_13860 NZ_CP089942.1 Protein Homology CDS 2616871 2617614 . - 0 ID=cds-WP_020323275.1;Parent=gene-LU604_RS13860;Dbxref=Genbank:WP_020323275.1;Name=WP_020323275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227699.1;locus_tag=LU604_RS13860;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_020323275.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2617761 2618195 . - . ID=gene-LU604_RS13865;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=LU604_RS13865;old_locus_tag=LU604_13865 NZ_CP089942.1 Protein Homology CDS 2617761 2618195 . - 0 ID=cds-WP_020323276.1;Parent=gene-LU604_RS13865;Dbxref=Genbank:WP_020323276.1;Name=WP_020323276.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667873.1;locus_tag=LU604_RS13865;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_020323276.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2618195 2619994 . - . ID=gene-LU604_RS13870;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=LU604_RS13870;old_locus_tag=LU604_13870 NZ_CP089942.1 Protein Homology CDS 2618195 2619994 . - 0 ID=cds-WP_233478532.1;Parent=gene-LU604_RS13870;Dbxref=Genbank:WP_233478532.1;Name=WP_233478532.1;Ontology_term=GO:0006422,GO:0004815,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323277.1;locus_tag=LU604_RS13870;product=aspartate--tRNA ligase;protein_id=WP_233478532.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2620272 2620835 . + . ID=gene-LU604_RS13875;Name=LU604_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13875;old_locus_tag=LU604_13875 NZ_CP089942.1 Protein Homology CDS 2620272 2620835 . + 0 ID=cds-WP_233478533.1;Parent=gene-LU604_RS13875;Dbxref=Genbank:WP_233478533.1;Name=WP_233478533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145564.1;locus_tag=LU604_RS13875;product=hydrolase;protein_id=WP_233478533.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2620928 2621752 . + . ID=gene-LU604_RS13880;Name=LU604_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13880;old_locus_tag=LU604_13880 NZ_CP089942.1 Protein Homology CDS 2620928 2621752 . + 0 ID=cds-WP_020323279.1;Parent=gene-LU604_RS13880;Dbxref=Genbank:WP_020323279.1;Name=WP_020323279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170035.1;locus_tag=LU604_RS13880;product=DUF72 domain-containing protein;protein_id=WP_020323279.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2621875 2622162 . + . ID=gene-LU604_RS13885;Name=LU604_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13885;old_locus_tag=LU604_13885 NZ_CP089942.1 Protein Homology CDS 2621875 2622162 . + 0 ID=cds-WP_020323280.1;Parent=gene-LU604_RS13885;Dbxref=Genbank:WP_020323280.1;Name=WP_020323280.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013304.2;locus_tag=LU604_RS13885;product=MAPEG family protein;protein_id=WP_020323280.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2622186 2622308 . + . ID=gene-LU604_RS27000;Name=LU604_RS27000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27000 NZ_CP089942.1 GeneMarkS-2+ CDS 2622186 2622308 . + 0 ID=cds-WP_256371756.1;Parent=gene-LU604_RS27000;Dbxref=Genbank:WP_256371756.1;Name=WP_256371756.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS27000;product=hypothetical protein;protein_id=WP_256371756.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2622301 2623041 . + . ID=gene-LU604_RS13890;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=LU604_RS13890;old_locus_tag=LU604_13890 NZ_CP089942.1 Protein Homology CDS 2622301 2623041 . + 0 ID=cds-WP_020323281.1;Parent=gene-LU604_RS13890;Dbxref=Genbank:WP_020323281.1;Name=WP_020323281.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544464.1;locus_tag=LU604_RS13890;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_020323281.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2623038 2624006 . + . ID=gene-LU604_RS13895;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=LU604_RS13895;old_locus_tag=LU604_13895 NZ_CP089942.1 Protein Homology CDS 2623038 2624006 . + 0 ID=cds-WP_233480798.1;Parent=gene-LU604_RS13895;Dbxref=Genbank:WP_233480798.1;Name=WP_233480798.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105095.1;locus_tag=LU604_RS13895;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_233480798.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2624561 2624668 . - . ID=gene-LU604_RS13900;Name=LU604_RS13900;end_range=2624668,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13900;old_locus_tag=LU604_13900;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2624561 2624668 . - 0 ID=cds-LU604_RS13900;Parent=gene-LU604_RS13900;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2624668,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539816.1;locus_tag=LU604_RS13900;partial=true;product=cytochrome B;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2624657 2625430 . + . ID=gene-LU604_RS13905;Name=LU604_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13905;old_locus_tag=LU604_13905 NZ_CP089942.1 Protein Homology CDS 2624657 2625430 . + 0 ID=cds-WP_233480799.1;Parent=gene-LU604_RS13905;Dbxref=Genbank:WP_233480799.1;Name=WP_233480799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014538763.1;locus_tag=LU604_RS13905;product=hypothetical protein;protein_id=WP_233480799.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2625423 2625833 . + . ID=gene-LU604_RS13910;Name=LU604_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13910;old_locus_tag=LU604_13910 NZ_CP089942.1 GeneMarkS-2+ CDS 2625423 2625833 . + 0 ID=cds-WP_233478534.1;Parent=gene-LU604_RS13910;Dbxref=Genbank:WP_233478534.1;Name=WP_233478534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS13910;product=hypothetical protein;protein_id=WP_233478534.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2626408 2627163 . - . ID=gene-LU604_RS13915;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=LU604_RS13915;old_locus_tag=LU604_13915 NZ_CP089942.1 Protein Homology CDS 2626408 2627163 . - 0 ID=cds-WP_020323285.1;Parent=gene-LU604_RS13915;Dbxref=Genbank:WP_020323285.1;Name=WP_020323285.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158007.1;locus_tag=LU604_RS13915;product=copper homeostasis protein CutC;protein_id=WP_020323285.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2627414 2628564 . + . ID=gene-LU604_RS13920;Name=LU604_RS13920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS13920;old_locus_tag=LU604_13920;pseudo=true NZ_CP089942.1 Protein Homology CDS 2627414 2628564 . + 0 ID=cds-LU604_RS13920;Parent=gene-LU604_RS13920;Note=frameshifted;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007889546.1;locus_tag=LU604_RS13920;product=PatB family C-S lyase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2628559 2629119 . - . ID=gene-LU604_RS13925;Name=LU604_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13925;old_locus_tag=LU604_13925 NZ_CP089942.1 Protein Homology CDS 2628559 2629119 . - 0 ID=cds-WP_233478535.1;Parent=gene-LU604_RS13925;Dbxref=Genbank:WP_233478535.1;Name=WP_233478535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323286.1;locus_tag=LU604_RS13925;product=VOC family protein;protein_id=WP_233478535.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2629730 2631460 . + . ID=gene-LU604_RS13930;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=LU604_RS13930;old_locus_tag=LU604_13930 NZ_CP089942.1 Protein Homology CDS 2629730 2631460 . + 0 ID=cds-WP_233478536.1;Parent=gene-LU604_RS13930;Dbxref=Genbank:WP_233478536.1;Name=WP_233478536.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=LU604_RS13930;product=arginine--tRNA ligase;protein_id=WP_233478536.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2631697 2632089 . - . ID=gene-LU604_RS13935;Name=LU604_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13935;old_locus_tag=LU604_13935 NZ_CP089942.1 Protein Homology CDS 2631697 2632089 . - 0 ID=cds-WP_233478537.1;Parent=gene-LU604_RS13935;Dbxref=Genbank:WP_233478537.1;Name=WP_233478537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323289.1;locus_tag=LU604_RS13935;product=flagellar protein FlhE;protein_id=WP_233478537.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2632089 2634170 . - . ID=gene-LU604_RS13940;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=LU604_RS13940;old_locus_tag=LU604_13940 NZ_CP089942.1 Protein Homology CDS 2632089 2634170 . - 0 ID=cds-WP_020323290.1;Parent=gene-LU604_RS13940;Dbxref=Genbank:WP_020323290.1;Name=WP_020323290.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=flhA;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202545.1;locus_tag=LU604_RS13940;product=flagellar biosynthesis protein FlhA;protein_id=WP_020323290.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2634170 2635315 . - . ID=gene-LU604_RS13945;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=LU604_RS13945;old_locus_tag=LU604_13945 NZ_CP089942.1 Protein Homology CDS 2634170 2635315 . - 0 ID=cds-WP_233481309.1;Parent=gene-LU604_RS13945;Dbxref=Genbank:WP_233481309.1;Name=WP_233481309.1;Ontology_term=GO:0001539;gbkey=CDS;gene=flhB;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323292.1;locus_tag=LU604_RS13945;product=flagellar biosynthesis protein FlhB;protein_id=WP_233481309.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2635524 2636168 . - . ID=gene-LU604_RS13950;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=LU604_RS13950;old_locus_tag=LU604_13950 NZ_CP089942.1 Protein Homology CDS 2635524 2636168 . - 0 ID=cds-WP_020323294.1;Parent=gene-LU604_RS13950;Dbxref=Genbank:WP_020323294.1;Name=WP_020323294.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210872.1;locus_tag=LU604_RS13950;product=protein phosphatase CheZ;protein_id=WP_020323294.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2636178 2636567 . - . ID=gene-LU604_RS13955;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=LU604_RS13955;old_locus_tag=LU604_13955 NZ_CP089942.1 Protein Homology CDS 2636178 2636567 . - 0 ID=cds-WP_020323295.1;Parent=gene-LU604_RS13955;Dbxref=Genbank:WP_020323295.1;Name=WP_020323295.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=LU604_RS13955;product=chemotaxis response regulator CheY;protein_id=WP_020323295.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2636617 2637666 . - . ID=gene-LU604_RS13960;Name=LU604_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13960;old_locus_tag=LU604_13960 NZ_CP089942.1 Protein Homology CDS 2636617 2637666 . - 0 ID=cds-WP_020323296.1;Parent=gene-LU604_RS13960;Dbxref=Genbank:WP_020323296.1;Name=WP_020323296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=LU604_RS13960;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=WP_020323296.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2637666 2638538 . - . ID=gene-LU604_RS13965;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=LU604_RS13965;old_locus_tag=LU604_13965 NZ_CP089942.1 Protein Homology CDS 2637666 2638538 . - 0 ID=cds-WP_020323297.1;Parent=gene-LU604_RS13965;Dbxref=Genbank:WP_020323297.1;Name=WP_020323297.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158033.1;locus_tag=LU604_RS13965;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_020323297.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2638564 2640177 . - . ID=gene-LU604_RS13970;Name=LU604_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13970;old_locus_tag=LU604_13970 NZ_CP089942.1 Protein Homology CDS 2638564 2640177 . - 0 ID=cds-WP_233478538.1;Parent=gene-LU604_RS13970;Dbxref=Genbank:WP_233478538.1;Name=WP_233478538.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323298.1;locus_tag=LU604_RS13970;product=methyl-accepting chemotaxis protein;protein_id=WP_233478538.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2640220 2641899 . - . ID=gene-LU604_RS13975;Name=LU604_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13975;old_locus_tag=LU604_13975 NZ_CP089942.1 Protein Homology CDS 2640220 2641899 . - 0 ID=cds-WP_233478539.1;Parent=gene-LU604_RS13975;Dbxref=Genbank:WP_233478539.1;Name=WP_233478539.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849150.1;locus_tag=LU604_RS13975;product=methyl-accepting chemotaxis protein;protein_id=WP_233478539.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2642107 2643315 . - . ID=gene-LU604_RS13980;Name=LU604_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS13980;old_locus_tag=LU604_13980 NZ_CP089942.1 Protein Homology CDS 2642107 2643315 . - 0 ID=cds-WP_233480427.1;Parent=gene-LU604_RS13980;Dbxref=Genbank:WP_233480427.1;Name=WP_233480427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368856.1;locus_tag=LU604_RS13980;product=transposase;protein_id=WP_233480427.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2643339 2643755 . + . ID=gene-LU604_RS13985;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS13985;old_locus_tag=LU604_13985 NZ_CP089942.1 Protein Homology CDS 2643339 2643755 . + 0 ID=cds-WP_233478541.1;Parent=gene-LU604_RS13985;Dbxref=Genbank:WP_233478541.1;Name=WP_233478541.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368599.1;locus_tag=LU604_RS13985;product=IS200/IS605 family transposase;protein_id=WP_233478541.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2644185 2644682 . - . ID=gene-LU604_RS13990;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=LU604_RS13990;old_locus_tag=LU604_13990 NZ_CP089942.1 Protein Homology CDS 2644185 2644682 . - 0 ID=cds-WP_020323300.1;Parent=gene-LU604_RS13990;Dbxref=Genbank:WP_020323300.1;Name=WP_020323300.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667848.1;locus_tag=LU604_RS13990;product=chemotaxis protein CheW;protein_id=WP_020323300.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2644707 2646698 . - . ID=gene-LU604_RS13995;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=LU604_RS13995;old_locus_tag=LU604_13995 NZ_CP089942.1 Protein Homology CDS 2644707 2646698 . - 0 ID=cds-WP_198292546.1;Parent=gene-LU604_RS13995;Dbxref=Genbank:WP_198292546.1;Name=WP_198292546.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358231.1;locus_tag=LU604_RS13995;product=chemotaxis protein CheA;protein_id=WP_198292546.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2646709 2647749 . - . ID=gene-LU604_RS14000;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=LU604_RS14000;old_locus_tag=LU604_14000 NZ_CP089942.1 Protein Homology CDS 2646709 2647749 . - 0 ID=cds-WP_233478542.1;Parent=gene-LU604_RS14000;Dbxref=Genbank:WP_233478542.1;Name=WP_233478542.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323302.1;locus_tag=LU604_RS14000;product=flagellar motor protein MotB;protein_id=WP_233478542.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2647746 2648633 . - . ID=gene-LU604_RS14005;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=LU604_RS14005;old_locus_tag=LU604_14005 NZ_CP089942.1 Protein Homology CDS 2647746 2648633 . - 0 ID=cds-WP_233478543.1;Parent=gene-LU604_RS14005;Dbxref=Genbank:WP_233478543.1;Name=WP_233478543.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158046.1;locus_tag=LU604_RS14005;product=flagellar motor stator protein MotA;protein_id=WP_233478543.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2648766 2649344 . - . ID=gene-LU604_RS14010;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=LU604_RS14010;old_locus_tag=LU604_14010 NZ_CP089942.1 Protein Homology CDS 2648766 2649344 . - 0 ID=cds-WP_020323304.1;Parent=gene-LU604_RS14010;Dbxref=Genbank:WP_020323304.1;Name=WP_020323304.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158052.1;locus_tag=LU604_RS14010;product=flagellar transcriptional regulator FlhC;protein_id=WP_020323304.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2649344 2649697 . - . ID=gene-LU604_RS14015;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=LU604_RS14015;old_locus_tag=LU604_14015 NZ_CP089942.1 Protein Homology CDS 2649344 2649697 . - 0 ID=cds-WP_020323305.1;Parent=gene-LU604_RS14015;Dbxref=Genbank:WP_020323305.1;Name=WP_020323305.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158054.1;locus_tag=LU604_RS14015;product=flagellar transcriptional regulator FlhD;protein_id=WP_020323305.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2650296 2650445 . - . ID=gene-LU604_RS14020;Name=LU604_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14020;old_locus_tag=LU604_14020 NZ_CP089942.1 GeneMarkS-2+ CDS 2650296 2650445 . - 0 ID=cds-WP_233478544.1;Parent=gene-LU604_RS14020;Dbxref=Genbank:WP_233478544.1;Name=WP_233478544.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14020;product=hypothetical protein;protein_id=WP_233478544.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2650624 2652030 . - . ID=gene-LU604_RS14025;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=LU604_RS14025;old_locus_tag=LU604_14025 NZ_CP089942.1 Protein Homology CDS 2650624 2652030 . - 0 ID=cds-WP_020323306.1;Parent=gene-LU604_RS14025;Dbxref=Genbank:WP_020323306.1;Name=WP_020323306.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492802.1;locus_tag=LU604_RS14025;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_020323306.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2652035 2652814 . - . ID=gene-LU604_RS14030;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=LU604_RS14030;old_locus_tag=LU604_14030 NZ_CP089942.1 Protein Homology CDS 2652035 2652814 . - 0 ID=cds-WP_020323308.1;Parent=gene-LU604_RS14030;Dbxref=Genbank:WP_020323308.1;Name=WP_020323308.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202561.1;locus_tag=LU604_RS14030;product=trehalose-phosphatase;protein_id=WP_020323308.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2653557 2654534 . - . ID=gene-LU604_RS14035;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=LU604_RS14035;old_locus_tag=LU604_14035 NZ_CP089942.1 Protein Homology CDS 2653557 2654534 . - 0 ID=cds-WP_020323309.1;Parent=gene-LU604_RS14035;Dbxref=Genbank:WP_020323309.1;Name=WP_020323309.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441189.1;locus_tag=LU604_RS14035;product=porphobilinogen synthase;protein_id=WP_020323309.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2654779 2655612 . - . ID=gene-LU604_RS14040;Name=LU604_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14040;old_locus_tag=LU604_14040 NZ_CP089942.1 Protein Homology CDS 2654779 2655612 . - 0 ID=cds-WP_233480800.1;Parent=gene-LU604_RS14040;Dbxref=Genbank:WP_233480800.1;Name=WP_233480800.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=LU604_RS14040;product=glycosyltransferase;protein_id=WP_233480800.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2655868 2656581 . - . ID=gene-LU604_RS14045;Name=LU604_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14045;old_locus_tag=LU604_14045 NZ_CP089942.1 Protein Homology CDS 2655868 2656581 . - 0 ID=cds-WP_020323311.1;Parent=gene-LU604_RS14045;Dbxref=Genbank:WP_020323311.1;Name=WP_020323311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017346348.1;locus_tag=LU604_RS14045;product=glutamine amidotransferase;protein_id=WP_020323311.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2656775 2657335 . - . ID=gene-LU604_RS14050;Name=LU604_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14050;old_locus_tag=LU604_14050 NZ_CP089942.1 Protein Homology CDS 2656775 2657335 . - 0 ID=cds-WP_020323312.1;Parent=gene-LU604_RS14050;Dbxref=Genbank:WP_020323312.1;Name=WP_020323312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001921.1;locus_tag=LU604_RS14050;product=molecular chaperone;protein_id=WP_020323312.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2657373 2657609 . - . ID=gene-LU604_RS14055;Name=LU604_RS14055;end_range=2657609,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14055;old_locus_tag=LU604_14055;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2657373 2657609 . - 0 ID=cds-LU604_RS14055;Parent=gene-LU604_RS14055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2657609,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202635.1;locus_tag=LU604_RS14055;partial=true;product=phosphatase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2658003 2658260 . - . ID=gene-LU604_RS14060;Name=LU604_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14060;old_locus_tag=LU604_14060 NZ_CP089942.1 GeneMarkS-2+ CDS 2658003 2658260 . - 0 ID=cds-WP_020323314.1;Parent=gene-LU604_RS14060;Dbxref=Genbank:WP_020323314.1;Name=WP_020323314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14060;product=hypothetical protein;protein_id=WP_020323314.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2658357 2658728 . + . ID=gene-LU604_RS14065;Name=LU604_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14065;old_locus_tag=LU604_14065 NZ_CP089942.1 Protein Homology CDS 2658357 2658728 . + 0 ID=cds-WP_233478545.1;Parent=gene-LU604_RS14065;Dbxref=Genbank:WP_233478545.1;Name=WP_233478545.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=LU604_RS14065;product=tyrosine-type recombinase/integrase;protein_id=WP_233478545.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2658867 2659019 . + . ID=gene-LU604_RS14070;Name=LU604_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14070;old_locus_tag=LU604_14070 NZ_CP089942.1 GeneMarkS-2+ CDS 2658867 2659019 . + 0 ID=cds-WP_233478546.1;Parent=gene-LU604_RS14070;Dbxref=Genbank:WP_233478546.1;Name=WP_233478546.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14070;product=hypothetical protein;protein_id=WP_233478546.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2659098 2660138 . + . ID=gene-LU604_RS14075;Name=LU604_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14075;old_locus_tag=LU604_14075 NZ_CP089942.1 Protein Homology CDS 2659098 2660138 . + 0 ID=cds-WP_233478553.1-16;Parent=gene-LU604_RS14075;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS14075;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2660268 2661476 . - . ID=gene-LU604_RS14080;Name=LU604_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14080;old_locus_tag=LU604_14080 NZ_CP089942.1 Protein Homology CDS 2660268 2661476 . - 0 ID=cds-WP_233478547.1;Parent=gene-LU604_RS14080;Dbxref=Genbank:WP_233478547.1;Name=WP_233478547.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS14080;product=IS256 family transposase;protein_id=WP_233478547.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2661691 2662388 . + . ID=gene-LU604_RS14085;Name=LU604_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14085;old_locus_tag=LU604_14085 NZ_CP089942.1 Protein Homology CDS 2661691 2661940 . + 0 ID=cds-WP_233481310.1;Parent=gene-LU604_RS14085;Dbxref=Genbank:WP_233481310.1;Name=WP_233481310.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS14085;product=IS1 family transposase;protein_id=WP_233481310.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2661940 2662388 . + 2 ID=cds-WP_233481310.1;Parent=gene-LU604_RS14085;Dbxref=Genbank:WP_233481310.1;Name=WP_233481310.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS14085;product=IS1 family transposase;protein_id=WP_233481310.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2662440 2662883 . - . ID=gene-LU604_RS14090;Name=LU604_RS14090;end_range=2662883,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14090;old_locus_tag=LU604_14090;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2662440 2662883 . - 0 ID=cds-LU604_RS14090;Parent=gene-LU604_RS14090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;end_range=2662883,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF012464.2;locus_tag=LU604_RS14090;partial=true;product=recombinase family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2663110 2663490 . - . ID=gene-LU604_RS14095;Name=LU604_RS14095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14095;old_locus_tag=LU604_14095;partial=true;pseudo=true;start_range=.,2663110 NZ_CP089942.1 Protein Homology CDS 2663110 2663490 . - 0 ID=cds-LU604_RS14095;Parent=gene-LU604_RS14095;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006358.1;locus_tag=LU604_RS14095;partial=true;product=PHP domain-containing protein;pseudo=true;start_range=.,2663110;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2663541 2664473 . - . ID=gene-LU604_RS14100;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=pseudogene;locus_tag=LU604_RS14100;old_locus_tag=LU604_14100;pseudo=true NZ_CP089942.1 Protein Homology CDS 2663541 2664473 . - 0 ID=cds-LU604_RS14100;Parent=gene-LU604_RS14100;Note=frameshifted;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase activity|0016618||IEA,glyoxylate reductase (NADP+) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146341.1;locus_tag=LU604_RS14100;product=glyoxylate/hydroxypyruvate reductase GhrA;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2664761 2665984 . + . ID=gene-LU604_RS14105;Name=LU604_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14105;old_locus_tag=LU604_14105 NZ_CP089942.1 Protein Homology CDS 2664761 2665984 . + 0 ID=cds-WP_233478549.1;Parent=gene-LU604_RS14105;Dbxref=Genbank:WP_233478549.1;Name=WP_233478549.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU604_RS14105;product=IS91 family transposase;protein_id=WP_233478549.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2666327 2666413 . + . ID=gene-LU604_RS14110;Name=LU604_RS14110;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS14110;old_locus_tag=LU604_14110 NZ_CP089942.1 tRNAscan-SE tRNA 2666327 2666413 . + . ID=rna-LU604_RS14110;Parent=gene-LU604_RS14110;anticodon=(pos:2666361..2666363);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS14110;product=tRNA-Ser NZ_CP089942.1 tRNAscan-SE exon 2666327 2666413 . + . ID=exon-LU604_RS14110-1;Parent=rna-LU604_RS14110;anticodon=(pos:2666361..2666363);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS14110;product=tRNA-Ser NZ_CP089942.1 RefSeq gene 2666846 2666933 . + . ID=gene-LU604_RS14115;Name=LU604_RS14115;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS14115;old_locus_tag=LU604_14115 NZ_CP089942.1 tRNAscan-SE tRNA 2666846 2666933 . + . ID=rna-LU604_RS14115;Parent=gene-LU604_RS14115;anticodon=(pos:2666880..2666882);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS14115;product=tRNA-Ser NZ_CP089942.1 tRNAscan-SE exon 2666846 2666933 . + . ID=exon-LU604_RS14115-1;Parent=rna-LU604_RS14115;anticodon=(pos:2666880..2666882);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS14115;product=tRNA-Ser NZ_CP089942.1 RefSeq gene 2666952 2667884 . - . ID=gene-LU604_RS14120;Name=LU604_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14120;old_locus_tag=LU604_14120 NZ_CP089942.1 Protein Homology CDS 2666952 2667884 . - 0 ID=cds-WP_233478550.1;Parent=gene-LU604_RS14120;Dbxref=Genbank:WP_233478550.1;Name=WP_233478550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006194.1;locus_tag=LU604_RS14120;product=DUF4942 domain-containing protein;protein_id=WP_233478550.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2668348 2669097 . + . ID=gene-LU604_RS14125;Name=LU604_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14125;old_locus_tag=LU604_14125 NZ_CP089942.1 Protein Homology CDS 2668348 2669097 . + 0 ID=cds-WP_233478551.1;Parent=gene-LU604_RS14125;Dbxref=Genbank:WP_233478551.1;Name=WP_233478551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015704101.1;locus_tag=LU604_RS14125;product=glycosyltransferase family 2 protein;protein_id=WP_233478551.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2669292 2669738 . - . ID=gene-LU604_RS14130;Name=LU604_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14130;old_locus_tag=LU604_14130 NZ_CP089942.1 GeneMarkS-2+ CDS 2669292 2669738 . - 0 ID=cds-WP_233478552.1;Parent=gene-LU604_RS14130;Dbxref=Genbank:WP_233478552.1;Name=WP_233478552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14130;product=hypothetical protein;protein_id=WP_233478552.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2669814 2670854 . + . ID=gene-LU604_RS14135;Name=LU604_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14135;old_locus_tag=LU604_14135 NZ_CP089942.1 Protein Homology CDS 2669814 2670854 . + 0 ID=cds-WP_233478553.1-17;Parent=gene-LU604_RS14135;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS14135;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2671239 2672441 . - . ID=gene-LU604_RS14140;Name=LU604_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14140;old_locus_tag=LU604_14140 NZ_CP089942.1 Protein Homology CDS 2671239 2672441 . - 0 ID=cds-WP_233478554.1;Parent=gene-LU604_RS14140;Dbxref=Genbank:WP_233478554.1;Name=WP_233478554.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239817.1;locus_tag=LU604_RS14140;product=tyrosine-type recombinase/integrase;protein_id=WP_233478554.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2673294 2673731 . - . ID=gene-LU604_RS14145;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS14145;old_locus_tag=LU604_14145 NZ_CP089942.1 Protein Homology CDS 2673294 2673731 . - 0 ID=cds-WP_233478555.1;Parent=gene-LU604_RS14145;Dbxref=Genbank:WP_233478555.1;Name=WP_233478555.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU604_RS14145;product=IS200/IS605 family transposase;protein_id=WP_233478555.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2673892 2674680 . - . ID=gene-LU604_RS14150;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=LU604_RS14150;old_locus_tag=LU604_14150 NZ_CP089942.1 Protein Homology CDS 2673892 2674680 . - 0 ID=cds-WP_020323326.1;Parent=gene-LU604_RS14150;Dbxref=Genbank:WP_020323326.1;Name=WP_020323326.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170085.1;locus_tag=LU604_RS14150;product=phosphate starvation-inducible protein PhoH;protein_id=WP_020323326.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2675237 2676523 . - . ID=gene-LU604_RS14155;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=LU604_RS14155;old_locus_tag=LU604_14155 NZ_CP089942.1 Protein Homology CDS 2675237 2676523 . - 0 ID=cds-WP_233478556.1;Parent=gene-LU604_RS14155;Dbxref=Genbank:WP_233478556.1;Name=WP_233478556.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323327.1;locus_tag=LU604_RS14155;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_233478556.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2676530 2677648 . - . ID=gene-LU604_RS14160;Name=LU604_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14160;old_locus_tag=LU604_14160 NZ_CP089942.1 Protein Homology CDS 2676530 2677648 . - 0 ID=cds-WP_233478557.1;Parent=gene-LU604_RS14160;Dbxref=Genbank:WP_233478557.1;Name=WP_233478557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000154398.1;locus_tag=LU604_RS14160;product=iron uptake system protein EfeO;protein_id=WP_233478557.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2677685 2678518 . - . ID=gene-LU604_RS14165;Name=LU604_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14165;old_locus_tag=LU604_14165 NZ_CP089942.1 Protein Homology CDS 2677685 2678518 . - 0 ID=cds-WP_233478558.1;Parent=gene-LU604_RS14165;Dbxref=Genbank:WP_233478558.1;Name=WP_233478558.1;Ontology_term=GO:0034755,GO:0005381,GO:0016020,GO:0033573;gbkey=CDS;go_component=membrane|0016020||IEA,high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202642.1;locus_tag=LU604_RS14165;product=FTR1 family protein;protein_id=WP_233478558.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2679141 2680625 . - . ID=gene-LU604_RS14170;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=LU604_RS14170;old_locus_tag=LU604_14170 NZ_CP089942.1 Protein Homology CDS 2679141 2680625 . - 0 ID=cds-WP_233478559.1;Parent=gene-LU604_RS14170;Dbxref=Genbank:WP_233478559.1;Name=WP_233478559.1;Ontology_term=GO:0015824,GO:0005298,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA;go_process=proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358245.1;locus_tag=LU604_RS14170;product=sodium/proline symporter PutP;protein_id=WP_233478559.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2681035 2684979 . + . ID=gene-LU604_RS14175;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=LU604_RS14175;old_locus_tag=LU604_14175 NZ_CP089942.1 Protein Homology CDS 2681035 2684979 . + 0 ID=cds-WP_233478560.1;Parent=gene-LU604_RS14175;Dbxref=Genbank:WP_233478560.1;Name=WP_233478560.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667818.1;locus_tag=LU604_RS14175;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_233478560.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2685084 2692070 . - . ID=gene-LU604_RS14180;Name=LU604_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14180;old_locus_tag=LU604_14180 NZ_CP089942.1 Protein Homology CDS 2685084 2692070 . - 0 ID=cds-WP_233481311.1;Parent=gene-LU604_RS14180;Dbxref=Genbank:WP_233481311.1;Name=WP_233481311.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023351.2;locus_tag=LU604_RS14180;product=Ig-like domain-containing protein;protein_id=WP_233481311.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2693283 2694491 . - . ID=gene-LU604_RS14185;Name=LU604_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14185;old_locus_tag=LU604_14185 NZ_CP089942.1 Protein Homology CDS 2693283 2694491 . - 0 ID=cds-WP_233478562.1;Parent=gene-LU604_RS14185;Dbxref=Genbank:WP_233478562.1;Name=WP_233478562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368856.1;locus_tag=LU604_RS14185;product=transposase;protein_id=WP_233478562.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2694515 2694931 . + . ID=gene-LU604_RS14190;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS14190;old_locus_tag=LU604_14190 NZ_CP089942.1 Protein Homology CDS 2694515 2694931 . + 0 ID=cds-WP_233478541.1-2;Parent=gene-LU604_RS14190;Dbxref=Genbank:WP_233478541.1;Name=WP_233478541.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368599.1;locus_tag=LU604_RS14190;product=IS200/IS605 family transposase;protein_id=WP_233478541.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2695051 2695788 . - . ID=gene-LU604_RS14195;Name=yecC;gbkey=Gene;gene=yecC;gene_biotype=protein_coding;locus_tag=LU604_RS14195;old_locus_tag=LU604_14195 NZ_CP089942.1 Protein Homology CDS 2695051 2695788 . - 0 ID=cds-WP_233478563.1;Parent=gene-LU604_RS14195;Dbxref=Genbank:WP_233478563.1;Name=WP_233478563.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=yecC;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323333.1;locus_tag=LU604_RS14195;product=L-cystine ABC transporter ATP-binding protein YecC;protein_id=WP_233478563.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2695785 2696453 . - . ID=gene-LU604_RS14200;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=LU604_RS14200;old_locus_tag=LU604_14200 NZ_CP089942.1 Protein Homology CDS 2695785 2696453 . - 0 ID=cds-WP_233478564.1;Parent=gene-LU604_RS14200;Dbxref=Genbank:WP_233478564.1;Name=WP_233478564.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323334.1;locus_tag=LU604_RS14200;product=cystine ABC transporter permease;protein_id=WP_233478564.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2696453 2697256 . - . ID=gene-LU604_RS14205;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=LU604_RS14205;old_locus_tag=LU604_14205 NZ_CP089942.1 Protein Homology CDS 2696453 2697256 . - 0 ID=cds-WP_233478565.1;Parent=gene-LU604_RS14205;Dbxref=Genbank:WP_233478565.1;Name=WP_233478565.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378234.1;locus_tag=LU604_RS14205;product=cystine ABC transporter substrate-binding protein;protein_id=WP_233478565.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2697349 2698335 . - . ID=gene-LU604_RS14210;Name=LU604_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14210;old_locus_tag=LU604_14210 NZ_CP089942.1 Protein Homology CDS 2697349 2698335 . - 0 ID=cds-WP_233478566.1;Parent=gene-LU604_RS14210;Dbxref=Genbank:WP_233478566.1;Name=WP_233478566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323336.1;locus_tag=LU604_RS14210;product=D-cysteine desulfhydrase;protein_id=WP_233478566.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2698425 2698928 . - . ID=gene-LU604_RS14215;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=LU604_RS14215;old_locus_tag=LU604_14215 NZ_CP089942.1 Protein Homology CDS 2698425 2698928 . - 0 ID=cds-WP_233478567.1;Parent=gene-LU604_RS14215;Dbxref=Genbank:WP_233478567.1;Name=WP_233478567.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158108.1;locus_tag=LU604_RS14215;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_233478567.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2698975 2699697 . - . ID=gene-LU604_RS14220;Name=LU604_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14220;old_locus_tag=LU604_14220 NZ_CP089942.1 Protein Homology CDS 2698975 2699697 . - 0 ID=cds-WP_233478568.1;Parent=gene-LU604_RS14220;Dbxref=Genbank:WP_233478568.1;Name=WP_233478568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800040.1;locus_tag=LU604_RS14220;product=RNA polymerase sigma factor FliA;protein_id=WP_233478568.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2699837 2700805 . - . ID=gene-LU604_RS14225;Name=LU604_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14225;old_locus_tag=LU604_14225 NZ_CP089942.1 Protein Homology CDS 2699837 2700805 . - 0 ID=cds-WP_233478569.1;Parent=gene-LU604_RS14225;Dbxref=Genbank:WP_233478569.1;Name=WP_233478569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593927.1;locus_tag=LU604_RS14225;product=HNH endonuclease signature motif containing protein;protein_id=WP_233478569.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2701074 2701796 . + . ID=gene-LU604_RS14230;Name=LU604_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14230;old_locus_tag=LU604_14230 NZ_CP089942.1 GeneMarkS-2+ CDS 2701074 2701796 . + 0 ID=cds-WP_233478570.1;Parent=gene-LU604_RS14230;Dbxref=Genbank:WP_233478570.1;Name=WP_233478570.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14230;product=hypothetical protein;protein_id=WP_233478570.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2701896 2702540 . + . ID=gene-LU604_RS14235;Name=LU604_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14235;old_locus_tag=LU604_14235 NZ_CP089942.1 Protein Homology CDS 2701896 2702540 . + 0 ID=cds-WP_233480801.1;Parent=gene-LU604_RS14235;Dbxref=Genbank:WP_233480801.1;Name=WP_233480801.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323341.1;locus_tag=LU604_RS14235;product=sugar phosphate nucleotidyltransferase;protein_id=WP_233480801.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2702525 2703622 . + . ID=gene-LU604_RS14240;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=LU604_RS14240;old_locus_tag=LU604_14240 NZ_CP089942.1 Protein Homology CDS 2702525 2703622 . + 0 ID=cds-WP_233478571.1;Parent=gene-LU604_RS14240;Dbxref=Genbank:WP_233478571.1;Name=WP_233478571.1;Ontology_term=GO:0009243,GO:0047733;gbkey=CDS;gene=rfbG;go_function=CDP-glucose 4%2C6-dehydratase activity|0047733||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323342.1;locus_tag=LU604_RS14240;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_233478571.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2703619 2704161 . + . ID=gene-LU604_RS14245;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=LU604_RS14245;old_locus_tag=LU604_14245 NZ_CP089942.1 Protein Homology CDS 2703619 2704161 . + 0 ID=cds-WP_233478572.1;Parent=gene-LU604_RS14245;Dbxref=Genbank:WP_233478572.1;Name=WP_233478572.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323343.1;locus_tag=LU604_RS14245;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_233478572.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2704149 2704304 . - . ID=gene-LU604_RS27005;Name=LU604_RS27005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27005 NZ_CP089942.1 GeneMarkS-2+ CDS 2704149 2704304 . - 0 ID=cds-WP_252120238.1;Parent=gene-LU604_RS27005;Dbxref=Genbank:WP_252120238.1;Name=WP_252120238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS27005;product=hypothetical protein;protein_id=WP_252120238.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2704349 2705017 . + . ID=gene-LU604_RS14250;Name=LU604_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14250;old_locus_tag=LU604_14250 NZ_CP089942.1 Protein Homology CDS 2704349 2705017 . + 0 ID=cds-WP_252120237.1;Parent=gene-LU604_RS14250;Dbxref=Genbank:WP_252120237.1;Name=WP_252120237.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013530.2;locus_tag=LU604_RS14250;product=NAD(P)-dependent oxidoreductase;protein_id=WP_252120237.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2705169 2706053 . + . ID=gene-LU604_RS14255;Name=LU604_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14255;old_locus_tag=LU604_14255 NZ_CP089942.1 Protein Homology CDS 2705169 2706053 . + 0 ID=cds-WP_233478573.1;Parent=gene-LU604_RS14255;Dbxref=Genbank:WP_233478573.1;Name=WP_233478573.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024880.2;locus_tag=LU604_RS14255;product=class I SAM-dependent methyltransferase;protein_id=WP_233478573.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2706292 2709819 . - . ID=gene-LU604_RS14260;Name=LU604_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14260;old_locus_tag=LU604_14260 NZ_CP089942.1 Protein Homology CDS 2706292 2709819 . - 0 ID=cds-WP_233478574.1;Parent=gene-LU604_RS14260;Dbxref=Genbank:WP_233478574.1;Name=WP_233478574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202654.1;locus_tag=LU604_RS14260;product=glycosyltransferase;protein_id=WP_233478574.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2709818 2709961 . + . ID=gene-LU604_RS14265;Name=LU604_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14265;old_locus_tag=LU604_14265 NZ_CP089942.1 GeneMarkS-2+ CDS 2709818 2709961 . + 0 ID=cds-WP_157275265.1;Parent=gene-LU604_RS14265;Dbxref=Genbank:WP_157275265.1;Name=WP_157275265.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14265;product=hypothetical protein;protein_id=WP_157275265.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2710359 2711642 . - . ID=gene-LU604_RS14270;Name=LU604_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14270;old_locus_tag=LU604_14270 NZ_CP089942.1 Protein Homology CDS 2710359 2711642 . - 0 ID=cds-WP_016192842.1;Parent=gene-LU604_RS14270;Dbxref=Genbank:WP_016192842.1;Name=WP_016192842.1;Ontology_term=GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079690.1;locus_tag=LU604_RS14270;product=FliC/FljB family flagellin;protein_id=WP_016192842.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2711923 2713335 . + . ID=gene-LU604_RS14275;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=LU604_RS14275;old_locus_tag=LU604_14275 NZ_CP089942.1 Protein Homology CDS 2711923 2713335 . + 0 ID=cds-WP_016192843.1;Parent=gene-LU604_RS14275;Dbxref=Genbank:WP_016192843.1;Name=WP_016192843.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202656.1;locus_tag=LU604_RS14275;product=flagellar filament capping protein FliD;protein_id=WP_016192843.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2713349 2713756 . + . ID=gene-LU604_RS14280;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=LU604_RS14280;old_locus_tag=LU604_14280 NZ_CP089942.1 Protein Homology CDS 2713349 2713756 . + 0 ID=cds-WP_016192844.1;Parent=gene-LU604_RS14280;Dbxref=Genbank:WP_016192844.1;Name=WP_016192844.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliS;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811147.1;locus_tag=LU604_RS14280;product=flagellar export chaperone FliS;protein_id=WP_016192844.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2713757 2714125 . + . ID=gene-LU604_RS14285;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=LU604_RS14285;old_locus_tag=LU604_14285 NZ_CP089942.1 Protein Homology CDS 2713757 2714125 . + 0 ID=cds-WP_233478575.1;Parent=gene-LU604_RS14285;Dbxref=Genbank:WP_233478575.1;Name=WP_233478575.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192845.1;locus_tag=LU604_RS14285;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_233478575.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2714259 2715061 . + . ID=gene-LU604_RS14290;Name=amyA;end_range=2715061,.;gbkey=Gene;gene=amyA;gene_biotype=pseudogene;locus_tag=LU604_RS14290;old_locus_tag=LU604_14290;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2714259 2715061 . + 0 ID=cds-LU604_RS14290;Parent=gene-LU604_RS14290;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005975,GO:0004553,GO:0005509;end_range=2715061,.;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136602.1;locus_tag=LU604_RS14290;partial=true;product=alpha-amylase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2715085 2715929 . - . ID=gene-LU604_RS14295;Name=LU604_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14295;old_locus_tag=LU604_14295 NZ_CP089942.1 Protein Homology CDS 2715584 2715929 . - 0 ID=cds-WP_233478576.1;Parent=gene-LU604_RS14295;Dbxref=Genbank:WP_233478576.1;Name=WP_233478576.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611197.1;locus_tag=LU604_RS14295;product=IS5 family transposase;protein_id=WP_233478576.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2715085 2715584 . - 2 ID=cds-WP_233478576.1;Parent=gene-LU604_RS14295;Dbxref=Genbank:WP_233478576.1;Name=WP_233478576.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611197.1;locus_tag=LU604_RS14295;product=IS5 family transposase;protein_id=WP_233478576.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2716018 2716374 . + . ID=gene-LU604_RS14300;Name=LU604_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14300;old_locus_tag=LU604_14300 NZ_CP089942.1 GeneMarkS-2+ CDS 2716018 2716374 . + 0 ID=cds-WP_233478577.1;Parent=gene-LU604_RS14300;Dbxref=Genbank:WP_233478577.1;Name=WP_233478577.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14300;product=hypothetical protein;protein_id=WP_233478577.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2716427 2716885 . + . ID=gene-LU604_RS14305;Name=LU604_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14305;old_locus_tag=LU604_14305 NZ_CP089942.1 Protein Homology CDS 2716427 2716885 . + 0 ID=cds-WP_233478578.1;Parent=gene-LU604_RS14305;Dbxref=Genbank:WP_233478578.1;Name=WP_233478578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=LU604_RS14305;product=hypothetical protein;protein_id=WP_233478578.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2716879 2717217 . + . ID=gene-LU604_RS14310;Name=LU604_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14310;old_locus_tag=LU604_14310 NZ_CP089942.1 Protein Homology CDS 2716879 2717217 . + 0 ID=cds-WP_233478579.1;Parent=gene-LU604_RS14310;Dbxref=Genbank:WP_233478579.1;Name=WP_233478579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078280.1;locus_tag=LU604_RS14310;product=DUF1493 family protein;protein_id=WP_233478579.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2717468 2717899 . + . ID=gene-LU604_RS14315;Name=LU604_RS14315;end_range=2717899,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14315;old_locus_tag=LU604_14315;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2717468 2717899 . + 0 ID=cds-LU604_RS14315;Parent=gene-LU604_RS14315;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019068,GO:0005198,GO:0044423;end_range=2717899,.;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077814.1;locus_tag=LU604_RS14315;partial=true;product=phage major capsid protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2717894 2718145 . + . ID=gene-LU604_RS14320;Name=LU604_RS14320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14320;old_locus_tag=LU604_14320;partial=true;pseudo=true;start_range=.,2717894 NZ_CP089942.1 Protein Homology CDS 2717894 2718145 . + 0 ID=cds-LU604_RS14320;Parent=gene-LU604_RS14320;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229104.1;locus_tag=LU604_RS14320;partial=true;product=terminase large subunit;pseudo=true;start_range=.,2717894;transl_table=11 NZ_CP089942.1 RefSeq gene 2718155 2718352 . + . ID=gene-LU604_RS14325;Name=LU604_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14325;old_locus_tag=LU604_14325 NZ_CP089942.1 GeneMarkS-2+ CDS 2718155 2718352 . + 0 ID=cds-WP_233478580.1;Parent=gene-LU604_RS14325;Dbxref=Genbank:WP_233478580.1;Name=WP_233478580.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14325;product=hypothetical protein;protein_id=WP_233478580.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2718657 2719325 . + . ID=gene-LU604_RS14330;Name=LU604_RS14330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14330;old_locus_tag=LU604_14330;partial=true;pseudo=true;start_range=.,2718657 NZ_CP089942.1 Protein Homology CDS 2718657 2719325 . + 0 ID=cds-LU604_RS14330;Parent=gene-LU604_RS14330;Note=converts 1%2C4-alpha-D-glucans to maltodextrin%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136602.1;locus_tag=LU604_RS14330;partial=true;product=alpha-amylase;pseudo=true;start_range=.,2718657;transl_table=11 NZ_CP089942.1 RefSeq gene 2719372 2719854 . - . ID=gene-LU604_RS14335;Name=LU604_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14335;old_locus_tag=LU604_14335 NZ_CP089942.1 Protein Homology CDS 2719372 2719854 . - 0 ID=cds-WP_233478581.1;Parent=gene-LU604_RS14335;Dbxref=Genbank:WP_233478581.1;Name=WP_233478581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192848.1;locus_tag=LU604_RS14335;product=lipoprotein;protein_id=WP_233478581.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2719995 2720318 . + . ID=gene-LU604_RS14340;Name=LU604_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14340;old_locus_tag=LU604_14340 NZ_CP089942.1 Protein Homology CDS 2719995 2720318 . + 0 ID=cds-WP_233478582.1;Parent=gene-LU604_RS14340;Dbxref=Genbank:WP_233478582.1;Name=WP_233478582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010618625.1;locus_tag=LU604_RS14340;product=DUF6388 family protein;protein_id=WP_233478582.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2721814 2722935 . + . ID=gene-LU604_RS14345;Name=LU604_RS14345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14345;old_locus_tag=LU604_14345;pseudo=true NZ_CP089942.1 Protein Homology CDS 2721814 2722935 . + 0 ID=cds-LU604_RS14345;Parent=gene-LU604_RS14345;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS14345;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2723085 2723758 . + . ID=gene-LU604_RS14350;Name=LU604_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14350;old_locus_tag=LU604_14350 NZ_CP089942.1 Protein Homology CDS 2723085 2723343 . + 0 ID=cds-WP_233478584.1;Parent=gene-LU604_RS14350;Dbxref=Genbank:WP_233478584.1;Name=WP_233478584.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU604_RS14350;product=IS1 family transposase;protein_id=WP_233478584.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2723343 2723758 . + 2 ID=cds-WP_233478584.1;Parent=gene-LU604_RS14350;Dbxref=Genbank:WP_233478584.1;Name=WP_233478584.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU604_RS14350;product=IS1 family transposase;protein_id=WP_233478584.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2724058 2725338 . + . ID=gene-LU604_RS14355;Name=LU604_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14355;old_locus_tag=LU604_14355 NZ_CP089942.1 Protein Homology CDS 2724058 2725338 . + 0 ID=cds-WP_233478585.1;Parent=gene-LU604_RS14355;Dbxref=Genbank:WP_233478585.1;Name=WP_233478585.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016903.2;locus_tag=LU604_RS14355;product=rhamnan synthesis F family protein;protein_id=WP_233478585.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2725526 2725708 . + . ID=gene-LU604_RS14360;Name=LU604_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14360;old_locus_tag=LU604_14360 NZ_CP089942.1 GeneMarkS-2+ CDS 2725526 2725708 . + 0 ID=cds-WP_016192853.1;Parent=gene-LU604_RS14360;Dbxref=Genbank:WP_016192853.1;Name=WP_016192853.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14360;product=hypothetical protein;protein_id=WP_016192853.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2726029 2726316 . + . ID=gene-LU604_RS14365;Name=LU604_RS14365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14365;old_locus_tag=LU604_14365;partial=true;pseudo=true;start_range=.,2726029 NZ_CP089942.1 Protein Homology CDS 2726029 2726316 . + 0 ID=cds-LU604_RS14365;Parent=gene-LU604_RS14365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU604_RS14365;partial=true;product=transposase;pseudo=true;start_range=.,2726029;transl_table=11 NZ_CP089942.1 RefSeq gene 2726393 2726950 . - . ID=gene-LU604_RS14370;Name=LU604_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14370;old_locus_tag=LU604_14370 NZ_CP089942.1 Protein Homology CDS 2726393 2726950 . - 0 ID=cds-WP_233478586.1;Parent=gene-LU604_RS14370;Dbxref=Genbank:WP_233478586.1;Name=WP_233478586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192856.1;locus_tag=LU604_RS14370;product=EAL domain-containing protein;protein_id=WP_233478586.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2727176 2727873 . + . ID=gene-LU604_RS14375;Name=LU604_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14375;old_locus_tag=LU604_14375 NZ_CP089942.1 Protein Homology CDS 2727176 2727425 . + 0 ID=cds-WP_233478587.1;Parent=gene-LU604_RS14375;Dbxref=Genbank:WP_233478587.1;Name=WP_233478587.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS14375;product=IS1 family transposase;protein_id=WP_233478587.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2727425 2727873 . + 2 ID=cds-WP_233478587.1;Parent=gene-LU604_RS14375;Dbxref=Genbank:WP_233478587.1;Name=WP_233478587.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS14375;product=IS1 family transposase;protein_id=WP_233478587.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2727954 2728918 . - . ID=gene-LU604_RS14380;Name=LU604_RS14380;end_range=2728918,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14380;old_locus_tag=LU604_14380;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2727954 2728918 . - 0 ID=cds-LU604_RS14380;Parent=gene-LU604_RS14380;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008272,GO:0015116,GO:0016020;end_range=2728918,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006316743.1;locus_tag=LU604_RS14380;partial=true;product=SulP family inorganic anion transporter;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2729111 2730202 . + . ID=gene-LU604_RS14385;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=LU604_RS14385;old_locus_tag=LU604_14385 NZ_CP089942.1 Protein Homology CDS 2729111 2730202 . + 0 ID=cds-WP_233478588.1;Parent=gene-LU604_RS14385;Dbxref=Genbank:WP_233478588.1;Name=WP_233478588.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=LU604_RS14385;product=redox-regulated ATPase YchF;protein_id=WP_233478588.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2730375 2730512 . + . ID=gene-LU604_RS14390;Name=LU604_RS14390;end_range=2730512,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14390;old_locus_tag=LU604_14390;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2730375 2730512 . + 0 ID=cds-LU604_RS14390;Parent=gene-LU604_RS14390;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2730512,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001357423.1;locus_tag=LU604_RS14390;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2730546 2731050 . - . ID=gene-LU604_RS14395;Name=LU604_RS14395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14395;old_locus_tag=LU604_14395;pseudo=true NZ_CP089942.1 Protein Homology CDS 2730546 2731050 . - 0 ID=cds-LU604_RS14395;Parent=gene-LU604_RS14395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803207.1;locus_tag=LU604_RS14395;product=peroxiredoxin;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2731404 2734181 . - . ID=gene-LU604_RS14400;Name=LU604_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14400;old_locus_tag=LU604_14400 NZ_CP089942.1 Protein Homology CDS 2731404 2734181 . - 0 ID=cds-WP_233478589.1;Parent=gene-LU604_RS14400;Dbxref=Genbank:WP_233478589.1;Name=WP_233478589.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013196203.1;locus_tag=LU604_RS14400;product=flavocytochrome c;protein_id=WP_233478589.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2734937 2736376 . + . ID=gene-LU604_RS14405;Name=LU604_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14405;old_locus_tag=LU604_14405 NZ_CP089942.1 Protein Homology CDS 2734937 2736376 . + 0 ID=cds-WP_233480802.1;Parent=gene-LU604_RS14405;Dbxref=Genbank:WP_233480802.1;Name=WP_233480802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851475.1;locus_tag=LU604_RS14405;product=anion permease;protein_id=WP_233480802.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2736416 2737591 . - . ID=gene-LU604_RS14410;Name=LU604_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14410;old_locus_tag=LU604_14410 NZ_CP089942.1 Protein Homology CDS 2736416 2737591 . - 0 ID=cds-WP_233478590.1;Parent=gene-LU604_RS14410;Dbxref=Genbank:WP_233478590.1;Name=WP_233478590.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023902.2;locus_tag=LU604_RS14410;product=type VI secretion system ImpA family N-terminal domain-containing protein;protein_id=WP_233478590.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2738086 2739750 . + . ID=gene-LU604_RS14415;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=LU604_RS14415;old_locus_tag=LU604_14415 NZ_CP089942.1 Protein Homology CDS 2738086 2739750 . + 0 ID=cds-WP_233478591.1;Parent=gene-LU604_RS14415;Dbxref=Genbank:WP_233478591.1;Name=WP_233478591.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;gene=treA;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192862.1;locus_tag=LU604_RS14415;product=alpha%2Calpha-trehalase TreA;protein_id=WP_233478591.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2739960 2742113 . + . ID=gene-LU604_RS14420;Name=LU604_RS14420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14420;old_locus_tag=LU604_14420;pseudo=true NZ_CP089942.1 Protein Homology CDS 2739960 2742113 . + 0 ID=cds-LU604_RS14420;Parent=gene-LU604_RS14420;Note=frameshifted;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171024.1;locus_tag=LU604_RS14420;product=TonB-dependent siderophore receptor;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2742238 2742911 . - . ID=gene-LU604_RS14425;Name=LU604_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14425;old_locus_tag=LU604_14425 NZ_CP089942.1 Protein Homology CDS 2742653 2742911 . - 0 ID=cds-WP_233478592.1;Parent=gene-LU604_RS14425;Dbxref=Genbank:WP_233478592.1;Name=WP_233478592.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU604_RS14425;product=IS1 family transposase;protein_id=WP_233478592.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2742238 2742653 . - 2 ID=cds-WP_233478592.1;Parent=gene-LU604_RS14425;Dbxref=Genbank:WP_233478592.1;Name=WP_233478592.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU604_RS14425;product=IS1 family transposase;protein_id=WP_233478592.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2743302 2743550 . - . ID=gene-LU604_RS14430;Name=LU604_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14430;old_locus_tag=LU604_14430 NZ_CP089942.1 Protein Homology CDS 2743302 2743550 . - 0 ID=cds-WP_016192864.1;Parent=gene-LU604_RS14430;Dbxref=Genbank:WP_016192864.1;Name=WP_016192864.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=LU604_RS14430;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_016192864.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2743725 2744456 . + . ID=gene-LU604_RS14435;Name=LU604_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14435;old_locus_tag=LU604_14435 NZ_CP089942.1 Protein Homology CDS 2743725 2744456 . + 0 ID=cds-WP_016192865.1;Parent=gene-LU604_RS14435;Dbxref=Genbank:WP_016192865.1;Name=WP_016192865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015700524.1;locus_tag=LU604_RS14435;product=flagellar brake protein;protein_id=WP_016192865.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2744581 2745213 . - . ID=gene-LU604_RS14440;Name=LU604_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14440;old_locus_tag=LU604_14440 NZ_CP089942.1 Protein Homology CDS 2744581 2745213 . - 0 ID=cds-WP_233478593.1;Parent=gene-LU604_RS14440;Dbxref=Genbank:WP_233478593.1;Name=WP_233478593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157223.1;locus_tag=LU604_RS14440;product=transglycosylase SLT domain-containing protein;protein_id=WP_233478593.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2745480 2746403 . + . ID=gene-LU604_RS14445;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=LU604_RS14445;old_locus_tag=LU604_14445 NZ_CP089942.1 Protein Homology CDS 2745480 2746403 . + 0 ID=cds-WP_016192868.1;Parent=gene-LU604_RS14445;Dbxref=Genbank:WP_016192868.1;Name=WP_016192868.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441665.1;locus_tag=LU604_RS14445;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_016192868.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2746721 2746786 . + . ID=gene-LU604_RS14450;Name=LU604_RS14450;end_range=2746786,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14450;old_locus_tag=LU604_14450;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2746721 2746786 . + 0 ID=cds-LU604_RS14450;Parent=gene-LU604_RS14450;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2746786,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228467.1;locus_tag=LU604_RS14450;partial=true;product=type VI secretion system tube protein Hcp;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2746823 2748031 . - . ID=gene-LU604_RS14455;Name=LU604_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14455;old_locus_tag=LU604_14455 NZ_CP089942.1 Protein Homology CDS 2746823 2748031 . - 0 ID=cds-WP_233478594.1;Parent=gene-LU604_RS14455;Dbxref=Genbank:WP_233478594.1;Name=WP_233478594.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS14455;product=IS256 family transposase;protein_id=WP_233478594.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2748056 2748514 . + . ID=gene-LU604_RS14460;Name=tssD;gbkey=Gene;gene=tssD;gene_biotype=protein_coding;locus_tag=LU604_RS14460;old_locus_tag=LU604_14460 NZ_CP089942.1 Protein Homology CDS 2748056 2748514 . + 0 ID=cds-WP_233481312.1;Parent=gene-LU604_RS14460;Dbxref=Genbank:WP_233481312.1;Name=WP_233481312.1;Ontology_term=GO:0003674;gbkey=CDS;gene=tssD;go_function=molecular_function|0003674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201602.1;locus_tag=LU604_RS14460;product=type VI secretion system tube protein TssD;protein_id=WP_233481312.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2748606 2749647 . - . ID=gene-LU604_RS14465;Name=LU604_RS14465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14465;old_locus_tag=LU604_14465;pseudo=true NZ_CP089942.1 Protein Homology CDS 2748606 2749647 . - 0 ID=cds-LU604_RS14465;Parent=gene-LU604_RS14465;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS14465;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2750239 2751408 . - . ID=gene-LU604_RS14470;Name=LU604_RS14470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14470;old_locus_tag=LU604_14470;pseudo=true NZ_CP089942.1 Protein Homology CDS 2750239 2751408 . - 0 ID=cds-LU604_RS14470;Parent=gene-LU604_RS14470;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611429.1;locus_tag=LU604_RS14470;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2751532 2751846 . + . ID=gene-LU604_RS14475;Name=LU604_RS14475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14475;old_locus_tag=LU604_14475;partial=true;pseudo=true;start_range=.,2751532 NZ_CP089942.1 Protein Homology CDS 2751532 2751846 . + 0 ID=cds-LU604_RS14475;Parent=gene-LU604_RS14475;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343758.1;locus_tag=LU604_RS14475;partial=true;product=transposase;pseudo=true;start_range=.,2751532;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2751907 2752151 . + . ID=gene-LU604_RS14480;Name=LU604_RS14480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14480;old_locus_tag=LU604_14480;pseudo=true NZ_CP089942.1 Protein Homology CDS 2751907 2752151 . + 0 ID=cds-LU604_RS14480;Parent=gene-LU604_RS14480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544102.1;locus_tag=LU604_RS14480;product=DinI-like family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2752351 2753552 . - . ID=gene-LU604_RS14485;Name=LU604_RS14485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14485;old_locus_tag=LU604_14485;pseudo=true NZ_CP089942.1 Protein Homology CDS 2752351 2753552 . - 0 ID=cds-LU604_RS14485;Parent=gene-LU604_RS14485;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU604_RS14485;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2753800 2754003 . - . ID=gene-LU604_RS14490;Name=LU604_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14490;old_locus_tag=LU604_14490 NZ_CP089942.1 Protein Homology CDS 2753800 2754003 . - 0 ID=cds-WP_016192871.1;Parent=gene-LU604_RS14490;Dbxref=Genbank:WP_016192871.1;Name=WP_016192871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201729.1;locus_tag=LU604_RS14490;product=hypothetical protein;protein_id=WP_016192871.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2754525 2754974 . - . ID=gene-LU604_RS14495;Name=LU604_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14495;old_locus_tag=LU604_14495 NZ_CP089942.1 GeneMarkS-2+ CDS 2754525 2754974 . - 0 ID=cds-WP_233478595.1;Parent=gene-LU604_RS14495;Dbxref=Genbank:WP_233478595.1;Name=WP_233478595.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14495;product=hypothetical protein;protein_id=WP_233478595.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2755050 2756090 . + . ID=gene-LU604_RS14500;Name=LU604_RS14500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14500;old_locus_tag=LU604_14500;pseudo=true NZ_CP089942.1 Protein Homology CDS 2755050 2756090 . + 0 ID=cds-LU604_RS14500;Parent=gene-LU604_RS14500;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS14500;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2756195 2757335 . - . ID=gene-LU604_RS14505;Name=LU604_RS14505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14505;old_locus_tag=LU604_14505;partial=true;pseudo=true;start_range=.,2756195 NZ_CP089942.1 Protein Homology CDS 2756195 2757335 . - 0 ID=cds-LU604_RS14505;Parent=gene-LU604_RS14505;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544028.1;locus_tag=LU604_RS14505;partial=true;product=amylovoran biosynthesis protein AmsF;pseudo=true;start_range=.,2756195;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2757472 2757776 . - . ID=gene-LU604_RS14510;Name=LU604_RS14510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14510;old_locus_tag=LU604_14510;pseudo=true NZ_CP089942.1 Protein Homology CDS 2757472 2757776 . - 0 ID=cds-LU604_RS14510;Parent=gene-LU604_RS14510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008108960.1;locus_tag=LU604_RS14510;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2757752 2758238 . - . ID=gene-LU604_RS14515;Name=LU604_RS14515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14515;old_locus_tag=LU604_14515;pseudo=true NZ_CP089942.1 Protein Homology CDS 2757752 2758238 . - 0 ID=cds-LU604_RS14515;Parent=gene-LU604_RS14515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356911.1;locus_tag=LU604_RS14515;product=lysozyme;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2759352 2759495 . - . ID=gene-LU604_RS14520;Name=LU604_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14520;old_locus_tag=LU604_14520 NZ_CP089942.1 GeneMarkS-2+ CDS 2759352 2759495 . - 0 ID=cds-WP_232426930.1;Parent=gene-LU604_RS14520;Dbxref=Genbank:WP_232426930.1;Name=WP_232426930.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14520;product=hypothetical protein;protein_id=WP_232426930.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2759581 2759682 . - . ID=gene-LU604_RS14525;Name=LU604_RS14525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14525;old_locus_tag=LU604_14525;partial=true;pseudo=true;start_range=.,2759581 NZ_CP089942.1 Protein Homology CDS 2759581 2759682 . - 0 ID=cds-LU604_RS14525;Parent=gene-LU604_RS14525;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202693.1;locus_tag=LU604_RS14525;partial=true;product=DUF2158 domain-containing protein;pseudo=true;start_range=.,2759581;transl_table=11 NZ_CP089942.1 RefSeq gene 2760426 2760557 . - . ID=gene-LU604_RS27010;Name=LU604_RS27010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27010 NZ_CP089942.1 Protein Homology CDS 2760426 2760557 . - 0 ID=cds-WP_016192876.1;Parent=gene-LU604_RS27010;Dbxref=Genbank:WP_016192876.1;Name=WP_016192876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800086.1;locus_tag=LU604_RS27010;product=hypothetical protein;protein_id=WP_016192876.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2760692 2761135 . - . ID=gene-LU604_RS14530;Name=LU604_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14530;old_locus_tag=LU604_14530 NZ_CP089942.1 Protein Homology CDS 2760692 2761135 . - 0 ID=cds-WP_233478596.1;Parent=gene-LU604_RS14530;Dbxref=Genbank:WP_233478596.1;Name=WP_233478596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192877.1;locus_tag=LU604_RS14530;product=DUF808 family protein;protein_id=WP_233478596.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2761231 2761497 . + . ID=gene-LU604_RS14535;Name=LU604_RS14535;end_range=2761497,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14535;old_locus_tag=LU604_14535;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2761231 2761497 . + 0 ID=cds-LU604_RS14535;Parent=gene-LU604_RS14535;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2761497,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU604_RS14535;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2761582 2761737 . + . ID=gene-LU604_RS14540;Name=LU604_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14540;old_locus_tag=LU604_14540 NZ_CP089942.1 GeneMarkS-2+ CDS 2761582 2761737 . + 0 ID=cds-WP_233478597.1-5;Parent=gene-LU604_RS14540;Dbxref=Genbank:WP_233478597.1;Name=WP_233478597.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14540;product=hypothetical protein;protein_id=WP_233478597.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2761801 2762805 . + . ID=gene-LU604_RS14545;Name=LU604_RS14545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14545;old_locus_tag=LU604_14545;partial=true;pseudo=true;start_range=.,2761801 NZ_CP089942.1 Protein Homology CDS 2761801 2762805 . + 0 ID=cds-LU604_RS14545;Parent=gene-LU604_RS14545;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU604_RS14545;partial=true;product=IS91 family transposase;pseudo=true;start_range=.,2761801;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2762948 2763892 . + . ID=gene-LU604_RS14550;Name=LU604_RS14550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14550;old_locus_tag=LU604_14550;partial=true;pseudo=true;start_range=.,2762948 NZ_CP089942.1 Protein Homology CDS 2762948 2763892 . + 0 ID=cds-LU604_RS14550;Parent=gene-LU604_RS14550;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU604_RS14550;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,2762948;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2763927 2764374 . - . ID=gene-LU604_RS14555;Name=LU604_RS14555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14555;old_locus_tag=LU604_14555;partial=true;pseudo=true;start_range=.,2763927 NZ_CP089942.1 Protein Homology CDS 2763927 2764374 . - 0 ID=cds-LU604_RS14555;Parent=gene-LU604_RS14555;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009089528.1;locus_tag=LU604_RS14555;partial=true;product=DUF808 family protein;pseudo=true;start_range=.,2763927;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2764392 2764669 . - . ID=gene-LU604_RS14560;Name=LU604_RS14560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14560;old_locus_tag=LU604_14560;pseudo=true NZ_CP089942.1 Protein Homology CDS 2764392 2764669 . - 0 ID=cds-LU604_RS14560;Parent=gene-LU604_RS14560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192880.1;locus_tag=LU604_RS14560;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2764784 2765254 . - . ID=gene-LU604_RS14565;Name=vsr;gbkey=Gene;gene=vsr;gene_biotype=protein_coding;locus_tag=LU604_RS14565;old_locus_tag=LU604_14565 NZ_CP089942.1 Protein Homology CDS 2764784 2765254 . - 0 ID=cds-WP_233478598.1;Parent=gene-LU604_RS14565;Dbxref=Genbank:WP_233478598.1;Name=WP_233478598.1;Ontology_term=GO:0006298,GO:0004520;gbkey=CDS;gene=vsr;go_function=endodeoxyribonuclease activity|0004520||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192881.1;locus_tag=LU604_RS14565;product=DNA mismatch endonuclease Vsr;protein_id=WP_233478598.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2765376 2766746 . - . ID=gene-LU604_RS14570;Name=LU604_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14570;old_locus_tag=LU604_14570 NZ_CP089942.1 Protein Homology CDS 2765376 2766746 . - 0 ID=cds-WP_232426932.1;Parent=gene-LU604_RS14570;Dbxref=Genbank:WP_232426932.1;Name=WP_232426932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202699.1;locus_tag=LU604_RS14570;product=DNA cytosine methyltransferase;protein_id=WP_232426932.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2766954 2767610 . + . ID=gene-LU604_RS14575;Name=LU604_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14575;old_locus_tag=LU604_14575 NZ_CP089942.1 Protein Homology CDS 2766954 2767610 . + 0 ID=cds-WP_016192883.1;Parent=gene-LU604_RS14575;Dbxref=Genbank:WP_016192883.1;Name=WP_016192883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078001.1;locus_tag=LU604_RS14575;product=epoxyqueuosine reductase QueH;protein_id=WP_016192883.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2767754 2768056 . - . ID=gene-LU604_RS14580;Name=LU604_RS14580;end_range=2768056,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14580;old_locus_tag=LU604_14580;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2767754 2768056 . - 0 ID=cds-LU604_RS14580;Parent=gene-LU604_RS14580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=2768056,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS14580;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2768189 2768377 . + . ID=gene-LU604_RS14585;Name=LU604_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14585;old_locus_tag=LU604_14585 NZ_CP089942.1 Protein Homology CDS 2768189 2768377 . + 0 ID=cds-WP_016192885.1;Parent=gene-LU604_RS14585;Dbxref=Genbank:WP_016192885.1;Name=WP_016192885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322936.1;locus_tag=LU604_RS14585;product=hypothetical protein;protein_id=WP_016192885.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2768814 2769406 . + . ID=gene-LU604_RS14590;Name=LU604_RS14590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14590;old_locus_tag=LU604_14590;pseudo=true NZ_CP089942.1 Protein Homology CDS 2768814 2769406 . + 0 ID=cds-LU604_RS14590;Parent=gene-LU604_RS14590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010247721.1;locus_tag=LU604_RS14590;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2769747 2769822 . + . ID=gene-LU604_RS14595;Name=LU604_RS14595;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS14595;old_locus_tag=LU604_14595 NZ_CP089942.1 tRNAscan-SE tRNA 2769747 2769822 . + . ID=rna-LU604_RS14595;Parent=gene-LU604_RS14595;anticodon=(pos:2769780..2769782);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS14595;product=tRNA-Asn NZ_CP089942.1 tRNAscan-SE exon 2769747 2769822 . + . ID=exon-LU604_RS14595-1;Parent=rna-LU604_RS14595;anticodon=(pos:2769780..2769782);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS14595;product=tRNA-Asn NZ_CP089942.1 RefSeq gene 2770000 2771208 . + . ID=gene-LU604_RS14600;Name=LU604_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14600;old_locus_tag=LU604_14600 NZ_CP089942.1 Protein Homology CDS 2770000 2771208 . + 0 ID=cds-WP_233478599.1;Parent=gene-LU604_RS14600;Dbxref=Genbank:WP_233478599.1;Name=WP_233478599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=LU604_RS14600;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_233478599.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2771451 2773457 . + . ID=gene-LU604_RS14605;Name=LU604_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14605;old_locus_tag=LU604_14605 NZ_CP089942.1 Protein Homology CDS 2771451 2773457 . + 0 ID=cds-WP_233478600.1;Parent=gene-LU604_RS14605;Dbxref=Genbank:WP_233478600.1;Name=WP_233478600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239317.1;locus_tag=LU604_RS14605;product=site-specific DNA-methyltransferase;protein_id=WP_233478600.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2773467 2776427 . + . ID=gene-LU604_RS14610;Name=LU604_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14610;old_locus_tag=LU604_14610 NZ_CP089942.1 Protein Homology CDS 2773467 2776427 . + 0 ID=cds-WP_233481313.1;Parent=gene-LU604_RS14610;Dbxref=Genbank:WP_233481313.1;Name=WP_233481313.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751376.1;locus_tag=LU604_RS14610;product=DEAD/DEAH box helicase family protein;protein_id=WP_233481313.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2776640 2777047 . + . ID=gene-LU604_RS14615;Name=LU604_RS14615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14615;old_locus_tag=LU604_14615;partial=true;pseudo=true;start_range=.,2776640 NZ_CP089942.1 Protein Homology CDS 2776640 2777047 . + 0 ID=cds-LU604_RS14615;Parent=gene-LU604_RS14615;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011073373.1;locus_tag=LU604_RS14615;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,2776640;transl_table=11 NZ_CP089942.1 RefSeq gene 2777325 2777936 . - . ID=gene-LU604_RS14620;Name=LU604_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14620;old_locus_tag=LU604_14620 NZ_CP089942.1 Protein Homology CDS 2777325 2777936 . - 0 ID=cds-WP_016192890.1;Parent=gene-LU604_RS14620;Dbxref=Genbank:WP_016192890.1;Name=WP_016192890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192890.1;locus_tag=LU604_RS14620;product=glycoside hydrolase family 19 protein;protein_id=WP_016192890.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2778008 2778286 . - . ID=gene-LU604_RS14625;Name=LU604_RS14625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14625;old_locus_tag=LU604_14625;partial=true;pseudo=true;start_range=.,2778008 NZ_CP089942.1 Protein Homology CDS 2778008 2778286 . - 0 ID=cds-LU604_RS14625;Parent=gene-LU604_RS14625;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192905.1;locus_tag=LU604_RS14625;partial=true;product=phage holin family protein;pseudo=true;start_range=.,2778008;transl_table=11 NZ_CP089942.1 RefSeq gene 2778776 2779462 . - . ID=gene-LU604_RS14630;Name=LU604_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14630;old_locus_tag=LU604_14630 NZ_CP089942.1 Protein Homology CDS 2778776 2779462 . - 0 ID=cds-WP_233478602.1;Parent=gene-LU604_RS14630;Dbxref=Genbank:WP_233478602.1;Name=WP_233478602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192892.1;locus_tag=LU604_RS14630;product=bacteriophage antitermination protein Q;protein_id=WP_233478602.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2779459 2779845 . - . ID=gene-LU604_RS14635;Name=LU604_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14635;old_locus_tag=LU604_14635 NZ_CP089942.1 Protein Homology CDS 2779459 2779845 . - 0 ID=cds-WP_233478603.1;Parent=gene-LU604_RS14635;Dbxref=Genbank:WP_233478603.1;Name=WP_233478603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820535.1;locus_tag=LU604_RS14635;product=hypothetical protein;protein_id=WP_233478603.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2779842 2780204 . - . ID=gene-LU604_RS14640;Name=rusA;gbkey=Gene;gene=rusA;gene_biotype=protein_coding;locus_tag=LU604_RS14640;old_locus_tag=LU604_14640 NZ_CP089942.1 Protein Homology CDS 2779842 2780204 . - 0 ID=cds-WP_233480805.1;Parent=gene-LU604_RS14640;Dbxref=Genbank:WP_233480805.1;Name=WP_233480805.1;Ontology_term=GO:0006281,GO:0006310,GO:0008821;gbkey=CDS;gene=rusA;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001008185.1;locus_tag=LU604_RS14640;product=crossover junction endodeoxyribonuclease RusA;protein_id=WP_233480805.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2780224 2780838 . - . ID=gene-LU604_RS14645;Name=LU604_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14645;old_locus_tag=LU604_14645 NZ_CP089942.1 Protein Homology CDS 2780224 2780838 . - 0 ID=cds-WP_233478604.1;Parent=gene-LU604_RS14645;Dbxref=Genbank:WP_233478604.1;Name=WP_233478604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200578.1;locus_tag=LU604_RS14645;product=MT-A70 family methyltransferase;protein_id=WP_233478604.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2780850 2781272 . - . ID=gene-LU604_RS14650;Name=LU604_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14650;old_locus_tag=LU604_14650 NZ_CP089942.1 Protein Homology CDS 2780850 2781272 . - 0 ID=cds-WP_233478605.1;Parent=gene-LU604_RS14650;Dbxref=Genbank:WP_233478605.1;Name=WP_233478605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011410799.1;locus_tag=LU604_RS14650;product=recombination protein NinB;protein_id=WP_233478605.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2781322 2781980 . - . ID=gene-LU604_RS14655;Name=LU604_RS14655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14655;old_locus_tag=LU604_14655;pseudo=true NZ_CP089942.1 Protein Homology CDS 2781322 2781980 . - 0 ID=cds-LU604_RS14655;Parent=gene-LU604_RS14655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238029.1;locus_tag=LU604_RS14655;product=ORF6N domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2782299 2783060 . - . ID=gene-LU604_RS14660;Name=LU604_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14660;old_locus_tag=LU604_14660 NZ_CP089942.1 Protein Homology CDS 2782299 2783060 . - 0 ID=cds-WP_233478606.1;Parent=gene-LU604_RS14660;Dbxref=Genbank:WP_233478606.1;Name=WP_233478606.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837634.1;locus_tag=LU604_RS14660;product=replication protein P;protein_id=WP_233478606.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2783057 2783758 . - . ID=gene-LU604_RS14665;Name=LU604_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14665;old_locus_tag=LU604_14665 NZ_CP089942.1 Protein Homology CDS 2783057 2783758 . - 0 ID=cds-WP_233481314.1-2;Parent=gene-LU604_RS14665;Dbxref=Genbank:WP_233481314.1;Name=WP_233481314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000061490.1;locus_tag=LU604_RS14665;product=helix-turn-helix domain-containing protein;protein_id=WP_233481314.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2783755 2784456 . - . ID=gene-LU604_RS14670;Name=LU604_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14670;old_locus_tag=LU604_14670 NZ_CP089942.1 Protein Homology CDS 2783755 2784456 . - 0 ID=cds-WP_233478607.1;Parent=gene-LU604_RS14670;Dbxref=Genbank:WP_233478607.1;Name=WP_233478607.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191208.1;locus_tag=LU604_RS14670;product=phage antirepressor KilAC domain-containing protein;protein_id=WP_233478607.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2784475 2784780 . - . ID=gene-LU604_RS14675;Name=LU604_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14675;old_locus_tag=LU604_14675 NZ_CP089942.1 Protein Homology CDS 2784475 2784780 . - 0 ID=cds-WP_233478608.1;Parent=gene-LU604_RS14675;Dbxref=Genbank:WP_233478608.1;Name=WP_233478608.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191209.1;locus_tag=LU604_RS14675;product=CII family transcriptional regulator;protein_id=WP_233478608.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2784892 2785119 . - . ID=gene-LU604_RS14680;Name=LU604_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14680;old_locus_tag=LU604_14680 NZ_CP089942.1 Protein Homology CDS 2784892 2785119 . - 0 ID=cds-WP_233478609.1;Parent=gene-LU604_RS14680;Dbxref=Genbank:WP_233478609.1;Name=WP_233478609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859811.1;locus_tag=LU604_RS14680;product=helix-turn-helix domain-containing protein;protein_id=WP_233478609.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2785222 2785953 . + . ID=gene-LU604_RS14685;Name=LU604_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14685;old_locus_tag=LU604_14685 NZ_CP089942.1 Protein Homology CDS 2785222 2785953 . + 0 ID=cds-WP_233478610.1;Parent=gene-LU604_RS14685;Dbxref=Genbank:WP_233478610.1;Name=WP_233478610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012305467.1;locus_tag=LU604_RS14685;product=helix-turn-helix transcriptional regulator;protein_id=WP_233478610.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2786047 2786691 . + . ID=gene-LU604_RS14690;Name=LU604_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14690;old_locus_tag=LU604_14690 NZ_CP089942.1 Protein Homology CDS 2786047 2786691 . + 0 ID=cds-WP_233478611.1;Parent=gene-LU604_RS14690;Dbxref=Genbank:WP_233478611.1;Name=WP_233478611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799893.1;locus_tag=LU604_RS14690;product=hypothetical protein;protein_id=WP_233478611.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2787213 2787659 . + . ID=gene-LU604_RS14695;Name=LU604_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14695;old_locus_tag=LU604_14695 NZ_CP089942.1 Protein Homology CDS 2787213 2787659 . + 0 ID=cds-WP_233478612.1;Parent=gene-LU604_RS14695;Dbxref=Genbank:WP_233478612.1;Name=WP_233478612.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024671.2;locus_tag=LU604_RS14695;product=DUF4065 domain-containing protein;protein_id=WP_233478612.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2787684 2788067 . + . ID=gene-LU604_RS14700;Name=LU604_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14700;old_locus_tag=LU604_14700 NZ_CP089942.1 Protein Homology CDS 2787684 2788067 . + 0 ID=cds-WP_233478613.1;Parent=gene-LU604_RS14700;Dbxref=Genbank:WP_233478613.1;Name=WP_233478613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001402904.1;locus_tag=LU604_RS14700;product=hypothetical protein;protein_id=WP_233478613.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2788097 2788270 . - . ID=gene-LU604_RS14705;Name=LU604_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14705;old_locus_tag=LU604_14705 NZ_CP089942.1 Protein Homology CDS 2788097 2788270 . - 0 ID=cds-WP_233478614.1;Parent=gene-LU604_RS14705;Dbxref=Genbank:WP_233478614.1;Name=WP_233478614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004223168.1;locus_tag=LU604_RS14705;product=hypothetical protein;protein_id=WP_233478614.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2788733 2789128 . + . ID=gene-LU604_RS14710;Name=LU604_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14710;old_locus_tag=LU604_14710 NZ_CP089942.1 GeneMarkS-2+ CDS 2788733 2789128 . + 0 ID=cds-WP_233481315.1;Parent=gene-LU604_RS14710;Dbxref=Genbank:WP_233481315.1;Name=WP_233481315.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14710;product=hypothetical protein;protein_id=WP_233481315.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2789179 2789433 . + . ID=gene-LU604_RS14715;Name=LU604_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14715;old_locus_tag=LU604_14715 NZ_CP089942.1 Protein Homology CDS 2789179 2789433 . + 0 ID=cds-WP_233478617.1;Parent=gene-LU604_RS14715;Dbxref=Genbank:WP_233478617.1;Name=WP_233478617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189480.1;locus_tag=LU604_RS14715;product=hypothetical protein;protein_id=WP_233478617.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2789555 2789962 . - . ID=gene-LU604_RS14720;Name=LU604_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14720;old_locus_tag=LU604_14720 NZ_CP089942.1 Protein Homology CDS 2789555 2789962 . - 0 ID=cds-WP_233478618.1;Parent=gene-LU604_RS14720;Dbxref=Genbank:WP_233478618.1;Name=WP_233478618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189481.1;locus_tag=LU604_RS14720;product=CCDC90 family protein;protein_id=WP_233478618.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2790244 2790849 . + . ID=gene-LU604_RS14725;Name=LU604_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14725;old_locus_tag=LU604_14725 NZ_CP089942.1 Protein Homology CDS 2790244 2790849 . + 0 ID=cds-WP_233478619.1;Parent=gene-LU604_RS14725;Dbxref=Genbank:WP_233478619.1;Name=WP_233478619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010431813.1;locus_tag=LU604_RS14725;product=Rha family transcriptional regulator;protein_id=WP_233478619.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2790914 2791678 . + . ID=gene-LU604_RS14730;Name=LU604_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14730;old_locus_tag=LU604_14730 NZ_CP089942.1 Protein Homology CDS 2790914 2791678 . + 0 ID=cds-WP_233478620.1-2;Parent=gene-LU604_RS14730;Dbxref=Genbank:WP_233478620.1;Name=WP_233478620.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303785.1;locus_tag=LU604_RS14730;product=phage antirepressor KilAC domain-containing protein;protein_id=WP_233478620.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2791718 2792290 . + . ID=gene-LU604_RS14735;Name=LU604_RS14735;end_range=2792290,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14735;old_locus_tag=LU604_14735;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2791718 2792290 . + 0 ID=cds-LU604_RS14735;Parent=gene-LU604_RS14735;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2792290,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020805447.1;locus_tag=LU604_RS14735;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2792368 2792724 . + . ID=gene-LU604_RS14740;Name=LU604_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14740;old_locus_tag=LU604_14740 NZ_CP089942.1 Protein Homology CDS 2792368 2792724 . + 0 ID=cds-WP_233478621.1;Parent=gene-LU604_RS14740;Dbxref=Genbank:WP_233478621.1;Name=WP_233478621.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013043.2;locus_tag=LU604_RS14740;product=HNH endonuclease;protein_id=WP_233478621.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2792736 2792867 . + . ID=gene-LU604_RS14745;Name=LU604_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14745;old_locus_tag=LU604_14745 NZ_CP089942.1 Protein Homology CDS 2792736 2792867 . + 0 ID=cds-WP_016191218.1-2;Parent=gene-LU604_RS14745;Dbxref=Genbank:WP_016191218.1;Name=WP_016191218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017346155.1;locus_tag=LU604_RS14745;product=protease FtsH-inhibitory lysogeny factor CIII;protein_id=WP_016191218.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2793180 2793815 . + . ID=gene-LU604_RS14750;Name=LU604_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14750;old_locus_tag=LU604_14750 NZ_CP089942.1 Protein Homology CDS 2793180 2793815 . + 0 ID=cds-WP_233478622.1;Parent=gene-LU604_RS14750;Dbxref=Genbank:WP_233478622.1;Name=WP_233478622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191219.1;locus_tag=LU604_RS14750;product=ERF family protein;protein_id=WP_233478622.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2793836 2794105 . + . ID=gene-LU604_RS14755;Name=LU604_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14755;old_locus_tag=LU604_14755 NZ_CP089942.1 GeneMarkS-2+ CDS 2793836 2794105 . + 0 ID=cds-WP_016191220.1-2;Parent=gene-LU604_RS14755;Dbxref=Genbank:WP_016191220.1;Name=WP_016191220.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14755;product=hypothetical protein;protein_id=WP_016191220.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2794115 2794465 . + . ID=gene-LU604_RS14760;Name=LU604_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14760;old_locus_tag=LU604_14760 NZ_CP089942.1 GeneMarkS-2+ CDS 2794115 2794465 . + 0 ID=cds-WP_233478623.1;Parent=gene-LU604_RS14760;Dbxref=Genbank:WP_233478623.1;Name=WP_233478623.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14760;product=hypothetical protein;protein_id=WP_233478623.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2794462 2794929 . + . ID=gene-LU604_RS14765;Name=LU604_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14765;old_locus_tag=LU604_14765 NZ_CP089942.1 GeneMarkS-2+ CDS 2794462 2794929 . + 0 ID=cds-WP_233478624.1;Parent=gene-LU604_RS14765;Dbxref=Genbank:WP_233478624.1;Name=WP_233478624.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14765;product=hypothetical protein;protein_id=WP_233478624.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2794922 2795179 . + . ID=gene-LU604_RS14770;Name=LU604_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14770;old_locus_tag=LU604_14770 NZ_CP089942.1 GeneMarkS-2+ CDS 2794922 2795179 . + 0 ID=cds-WP_233478625.1;Parent=gene-LU604_RS14770;Dbxref=Genbank:WP_233478625.1;Name=WP_233478625.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14770;product=hypothetical protein;protein_id=WP_233478625.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2795249 2795581 . + . ID=gene-LU604_RS14775;Name=LU604_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14775;old_locus_tag=LU604_14775 NZ_CP089942.1 GeneMarkS-2+ CDS 2795249 2795581 . + 0 ID=cds-WP_233478626.1;Parent=gene-LU604_RS14775;Dbxref=Genbank:WP_233478626.1;Name=WP_233478626.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14775;product=hypothetical protein;protein_id=WP_233478626.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2795578 2796009 . + . ID=gene-LU604_RS14780;Name=LU604_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14780;old_locus_tag=LU604_14780 NZ_CP089942.1 GeneMarkS-2+ CDS 2795578 2796009 . + 0 ID=cds-WP_233478627.1;Parent=gene-LU604_RS14780;Dbxref=Genbank:WP_233478627.1;Name=WP_233478627.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14780;product=hypothetical protein;protein_id=WP_233478627.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2796062 2796301 . + . ID=gene-LU604_RS14785;Name=LU604_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14785;old_locus_tag=LU604_14785 NZ_CP089942.1 GeneMarkS-2+ CDS 2796062 2796301 . + 0 ID=cds-WP_233478628.1;Parent=gene-LU604_RS14785;Dbxref=Genbank:WP_233478628.1;Name=WP_233478628.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14785;product=hypothetical protein;protein_id=WP_233478628.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2796291 2796728 . + . ID=gene-LU604_RS14790;Name=LU604_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14790;old_locus_tag=LU604_14790 NZ_CP089942.1 Protein Homology CDS 2796291 2796728 . + 0 ID=cds-WP_233478629.1;Parent=gene-LU604_RS14790;Dbxref=Genbank:WP_233478629.1;Name=WP_233478629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000208043.1;locus_tag=LU604_RS14790;product=hypothetical protein;protein_id=WP_233478629.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2796725 2798365 . + . ID=gene-LU604_RS14795;Name=LU604_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14795;old_locus_tag=LU604_14795 NZ_CP089942.1 Protein Homology CDS 2796725 2798365 . + 0 ID=cds-WP_233478630.1;Parent=gene-LU604_RS14795;Dbxref=Genbank:WP_233478630.1;Name=WP_233478630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118869.1;locus_tag=LU604_RS14795;product=DUF4942 domain-containing protein;protein_id=WP_233478630.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2798432 2798683 . + . ID=gene-LU604_RS14800;Name=LU604_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14800;old_locus_tag=LU604_14800 NZ_CP089942.1 Protein Homology CDS 2798432 2798683 . + 0 ID=cds-WP_016192101.1;Parent=gene-LU604_RS14800;Dbxref=Genbank:WP_016192101.1;Name=WP_016192101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544044.1;locus_tag=LU604_RS14800;product=excisionase;protein_id=WP_016192101.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2798658 2799251 . + . ID=gene-LU604_RS14805;Name=LU604_RS14805;end_range=2799251,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14805;old_locus_tag=LU604_14805;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2798658 2799251 . + 0 ID=cds-LU604_RS14805;Parent=gene-LU604_RS14805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015074,GO:0003677,GO:0008907;end_range=2799251,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239218.1;locus_tag=LU604_RS14805;partial=true;product=phage integrase Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2799314 2800354 . - . ID=gene-LU604_RS14810;Name=LU604_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14810;old_locus_tag=LU604_14810 NZ_CP089942.1 Protein Homology CDS 2799314 2800354 . - 0 ID=cds-WP_233478553.1-18;Parent=gene-LU604_RS14810;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS14810;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2800534 2800911 . - . ID=gene-LU604_RS14815;Name=LU604_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14815;old_locus_tag=LU604_14815 NZ_CP089942.1 GeneMarkS-2+ CDS 2800534 2800911 . - 0 ID=cds-WP_233478631.1;Parent=gene-LU604_RS14815;Dbxref=Genbank:WP_233478631.1;Name=WP_233478631.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14815;product=hypothetical protein;protein_id=WP_233478631.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2800925 2801563 . - . ID=gene-LU604_RS14820;Name=LU604_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14820;old_locus_tag=LU604_14820 NZ_CP089942.1 Protein Homology CDS 2800925 2801563 . - 0 ID=cds-WP_233478632.1;Parent=gene-LU604_RS14820;Dbxref=Genbank:WP_233478632.1;Name=WP_233478632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001472183.1;locus_tag=LU604_RS14820;product=hypothetical protein;protein_id=WP_233478632.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2801575 2802189 . - . ID=gene-LU604_RS14825;Name=LU604_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14825;old_locus_tag=LU604_14825 NZ_CP089942.1 Protein Homology CDS 2801575 2802189 . - 0 ID=cds-WP_233478633.1;Parent=gene-LU604_RS14825;Dbxref=Genbank:WP_233478633.1;Name=WP_233478633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120137.1;locus_tag=LU604_RS14825;product=methyltransferase domain-containing protein;protein_id=WP_233478633.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2802186 2803091 . - . ID=gene-LU604_RS14830;Name=LU604_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14830;old_locus_tag=LU604_14830 NZ_CP089942.1 Protein Homology CDS 2802186 2803091 . - 0 ID=cds-WP_233478634.1;Parent=gene-LU604_RS14830;Dbxref=Genbank:WP_233478634.1;Name=WP_233478634.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013257.2;locus_tag=LU604_RS14830;product=glycosyltransferase family 9 protein;protein_id=WP_233478634.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2803084 2803626 . - . ID=gene-LU604_RS14835;Name=LU604_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14835;old_locus_tag=LU604_14835 NZ_CP089942.1 Protein Homology CDS 2803084 2803626 . - 0 ID=cds-WP_233478635.1;Parent=gene-LU604_RS14835;Dbxref=Genbank:WP_233478635.1;Name=WP_233478635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120139.1;locus_tag=LU604_RS14835;product=hypothetical protein;protein_id=WP_233478635.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2804197 2804736 . - . ID=gene-LU604_RS14840;Name=LU604_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14840;old_locus_tag=LU604_14840 NZ_CP089942.1 Protein Homology CDS 2804197 2804736 . - 0 ID=cds-WP_233478636.1;Parent=gene-LU604_RS14840;Dbxref=Genbank:WP_233478636.1;Name=WP_233478636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000127620.1;locus_tag=LU604_RS14840;product=DUF2514 domain-containing protein;protein_id=WP_233478636.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2804740 2805147 . - . ID=gene-LU604_RS14845;Name=LU604_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14845;old_locus_tag=LU604_14845 NZ_CP089942.1 Protein Homology CDS 2804740 2805147 . - 0 ID=cds-WP_233478637.1;Parent=gene-LU604_RS14845;Dbxref=Genbank:WP_233478637.1;Name=WP_233478637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906784.1;locus_tag=LU604_RS14845;product=structural protein;protein_id=WP_233478637.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2805144 2805476 . - . ID=gene-LU604_RS14850;Name=LU604_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14850;old_locus_tag=LU604_14850 NZ_CP089942.1 Protein Homology CDS 2805144 2805476 . - 0 ID=cds-WP_138211584.1;Parent=gene-LU604_RS14850;Dbxref=Genbank:WP_138211584.1;Name=WP_138211584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906785.1;locus_tag=LU604_RS14850;product=phage holin family protein;protein_id=WP_138211584.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2805655 2806707 . - . ID=gene-LU604_RS14855;Name=LU604_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14855;old_locus_tag=LU604_14855 NZ_CP089942.1 Protein Homology CDS 2805655 2806707 . - 0 ID=cds-WP_233478638.1;Parent=gene-LU604_RS14855;Dbxref=Genbank:WP_233478638.1;Name=WP_233478638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799668.1;locus_tag=LU604_RS14855;product=site-specific DNA-methyltransferase;protein_id=WP_233478638.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2806858 2807049 . - . ID=gene-LU604_RS14860;Name=LU604_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14860;old_locus_tag=LU604_14860 NZ_CP089942.1 Protein Homology CDS 2806858 2807049 . - 0 ID=cds-WP_233478639.1;Parent=gene-LU604_RS14860;Dbxref=Genbank:WP_233478639.1;Name=WP_233478639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240136.1;locus_tag=LU604_RS14860;product=TrmB family transcriptional regulator;protein_id=WP_233478639.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2807248 2807943 . - . ID=gene-LU604_RS14865;Name=LU604_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14865;old_locus_tag=LU604_14865 NZ_CP089942.1 Protein Homology CDS 2807248 2807943 . - 0 ID=cds-WP_233478640.1;Parent=gene-LU604_RS14865;Dbxref=Genbank:WP_233478640.1;Name=WP_233478640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906788.1;locus_tag=LU604_RS14865;product=bacteriophage antitermination protein Q;protein_id=WP_233478640.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2807965 2809032 . - . ID=gene-LU604_RS14870;Name=LU604_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14870;old_locus_tag=LU604_14870 NZ_CP089942.1 Protein Homology CDS 2807965 2809032 . - 0 ID=cds-WP_233478641.1;Parent=gene-LU604_RS14870;Dbxref=Genbank:WP_233478641.1;Name=WP_233478641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324472.1;locus_tag=LU604_RS14870;product=DUF968 domain-containing protein;protein_id=WP_233478641.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2809029 2810756 . - . ID=gene-LU604_RS14875;Name=LU604_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14875;old_locus_tag=LU604_14875 NZ_CP089942.1 Protein Homology CDS 2809029 2810756 . - 0 ID=cds-WP_233478642.1;Parent=gene-LU604_RS14875;Dbxref=Genbank:WP_233478642.1;Name=WP_233478642.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034738.1;locus_tag=LU604_RS14875;product=DNA cytosine methyltransferase;protein_id=WP_233478642.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2810749 2811636 . - . ID=gene-LU604_RS14880;Name=LU604_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14880;old_locus_tag=LU604_14880 NZ_CP089942.1 Protein Homology CDS 2810749 2811636 . - 0 ID=cds-WP_233478643.1;Parent=gene-LU604_RS14880;Dbxref=Genbank:WP_233478643.1;Name=WP_233478643.1;Ontology_term=GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077458.1;locus_tag=LU604_RS14880;product=phage N-6-adenine-methyltransferase;protein_id=WP_233478643.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2811638 2812360 . - . ID=gene-LU604_RS14885;Name=LU604_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14885;old_locus_tag=LU604_14885 NZ_CP089942.1 Protein Homology CDS 2811638 2812360 . - 0 ID=cds-WP_233478644.1;Parent=gene-LU604_RS14885;Dbxref=Genbank:WP_233478644.1;Name=WP_233478644.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015871591.1;locus_tag=LU604_RS14885;product=replication protein P;protein_id=WP_233478644.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2812357 2813343 . - . ID=gene-LU604_RS14890;Name=LU604_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14890;old_locus_tag=LU604_14890 NZ_CP089942.1 Protein Homology CDS 2812357 2813343 . - 0 ID=cds-WP_233481316.1;Parent=gene-LU604_RS14890;Dbxref=Genbank:WP_233481316.1;Name=WP_233481316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014416534.1;locus_tag=LU604_RS14890;product=helix-turn-helix domain-containing protein;protein_id=WP_233481316.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2813340 2814176 . - . ID=gene-LU604_RS14895;Name=LU604_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14895;old_locus_tag=LU604_14895 NZ_CP089942.1 Protein Homology CDS 2813340 2814176 . - 0 ID=cds-WP_233481317.1;Parent=gene-LU604_RS14895;Dbxref=Genbank:WP_233481317.1;Name=WP_233481317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043035.1;locus_tag=LU604_RS14895;product=Rha family phage regulatory protein;protein_id=WP_233481317.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2814173 2814352 . - . ID=gene-LU604_RS14900;Name=LU604_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14900;old_locus_tag=LU604_14900 NZ_CP089942.1 Protein Homology CDS 2814173 2814352 . - 0 ID=cds-WP_233481318.1;Parent=gene-LU604_RS14900;Dbxref=Genbank:WP_233481318.1;Name=WP_233481318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324468.1;locus_tag=LU604_RS14900;product=DUF4222 domain-containing protein;protein_id=WP_233481318.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2814354 2815067 . - . ID=gene-LU604_RS14905;Name=LU604_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14905;old_locus_tag=LU604_14905 NZ_CP089942.1 Protein Homology CDS 2814354 2815067 . - 0 ID=cds-WP_233478647.1;Parent=gene-LU604_RS14905;Dbxref=Genbank:WP_233478647.1;Name=WP_233478647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122996.1;locus_tag=LU604_RS14905;product=phage regulatory protein/antirepressor Ant;protein_id=WP_233478647.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2815228 2815785 . - . ID=gene-LU604_RS14910;Name=LU604_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14910;old_locus_tag=LU604_14910 NZ_CP089942.1 Protein Homology CDS 2815228 2815785 . - 0 ID=cds-WP_233481319.1;Parent=gene-LU604_RS14910;Dbxref=Genbank:WP_233481319.1;Name=WP_233481319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007901034.1;locus_tag=LU604_RS14910;product=DNA-binding protein;protein_id=WP_233481319.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2815778 2816041 . - . ID=gene-LU604_RS14915;Name=LU604_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14915;old_locus_tag=LU604_14915 NZ_CP089942.1 Protein Homology CDS 2815778 2816041 . - 0 ID=cds-WP_233481320.1;Parent=gene-LU604_RS14915;Dbxref=Genbank:WP_233481320.1;Name=WP_233481320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001191680.1;locus_tag=LU604_RS14915;product=helix-turn-helix transcriptional regulator;protein_id=WP_233481320.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2816139 2816834 . + . ID=gene-LU604_RS14920;Name=LU604_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14920;old_locus_tag=LU604_14920 NZ_CP089942.1 Protein Homology CDS 2816139 2816834 . + 0 ID=cds-WP_233481321.1;Parent=gene-LU604_RS14920;Dbxref=Genbank:WP_233481321.1;Name=WP_233481321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000690183.1;locus_tag=LU604_RS14920;product=helix-turn-helix transcriptional regulator;protein_id=WP_233481321.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2817043 2817351 . + . ID=gene-LU604_RS14925;Name=LU604_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14925;old_locus_tag=LU604_14925 NZ_CP089942.1 Protein Homology CDS 2817043 2817351 . + 0 ID=cds-WP_233481322.1;Parent=gene-LU604_RS14925;Dbxref=Genbank:WP_233481322.1;Name=WP_233481322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415662.2;locus_tag=LU604_RS14925;product=hypothetical protein;protein_id=WP_233481322.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2817289 2817630 . - . ID=gene-LU604_RS14930;Name=LU604_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14930;old_locus_tag=LU604_14930 NZ_CP089942.1 Protein Homology CDS 2817289 2817630 . - 0 ID=cds-WP_233481323.1;Parent=gene-LU604_RS14930;Dbxref=Genbank:WP_233481323.1;Name=WP_233481323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415661.2;locus_tag=LU604_RS14930;product=hypothetical protein;protein_id=WP_233481323.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2818148 2818519 . + . ID=gene-LU604_RS14935;Name=LU604_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14935;old_locus_tag=LU604_14935 NZ_CP089942.1 Protein Homology CDS 2818148 2818519 . + 0 ID=cds-WP_024132791.1;Parent=gene-LU604_RS14935;Dbxref=Genbank:WP_024132791.1;Name=WP_024132791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668372.1;locus_tag=LU604_RS14935;product=hypothetical protein;protein_id=WP_024132791.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2818577 2818801 . + . ID=gene-LU604_RS14940;Name=LU604_RS14940;end_range=2818801,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS14940;old_locus_tag=LU604_14940;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2818577 2818801 . + 0 ID=cds-LU604_RS14940;Parent=gene-LU604_RS14940;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2818801,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080411.1;locus_tag=LU604_RS14940;partial=true;product=DUF2303 family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2818901 2819236 . + . ID=gene-LU604_RS14945;Name=LU604_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14945;old_locus_tag=LU604_14945 NZ_CP089942.1 GeneMarkS-2+ CDS 2818901 2819236 . + 0 ID=cds-WP_233481324.1;Parent=gene-LU604_RS14945;Dbxref=Genbank:WP_233481324.1;Name=WP_233481324.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS14945;product=hypothetical protein;protein_id=WP_233481324.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2819434 2820003 . + . ID=gene-LU604_RS14950;Name=LU604_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14950;old_locus_tag=LU604_14950 NZ_CP089942.1 Protein Homology CDS 2819434 2820003 . + 0 ID=cds-WP_233481325.1;Parent=gene-LU604_RS14950;Dbxref=Genbank:WP_233481325.1;Name=WP_233481325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123006.1;locus_tag=LU604_RS14950;product=3'-5' exonuclease;protein_id=WP_233481325.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2820047 2820292 . + . ID=gene-LU604_RS14955;Name=LU604_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14955;old_locus_tag=LU604_14955 NZ_CP089942.1 Protein Homology CDS 2820047 2820292 . + 0 ID=cds-WP_233478658.1;Parent=gene-LU604_RS14955;Dbxref=Genbank:WP_233478658.1;Name=WP_233478658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542206.1;locus_tag=LU604_RS14955;product=excisionase;protein_id=WP_233478658.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2820273 2821400 . + . ID=gene-LU604_RS14960;Name=LU604_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14960;old_locus_tag=LU604_14960 NZ_CP089942.1 Protein Homology CDS 2820273 2821400 . + 0 ID=cds-WP_233478659.1;Parent=gene-LU604_RS14960;Dbxref=Genbank:WP_233478659.1;Name=WP_233478659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017898966.1;locus_tag=LU604_RS14960;product=site-specific integrase;protein_id=WP_233478659.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2821513 2822763 . - . ID=gene-LU604_RS14965;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=LU604_RS14965;old_locus_tag=LU604_14965 NZ_CP089942.1 Protein Homology CDS 2821513 2822763 . - 0 ID=cds-WP_233478660.1;Parent=gene-LU604_RS14965;Dbxref=Genbank:WP_233478660.1;Name=WP_233478660.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=LU604_RS14965;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_233478660.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2822865 2823527 . + . ID=gene-LU604_RS14970;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=LU604_RS14970;old_locus_tag=LU604_14970 NZ_CP089942.1 Protein Homology CDS 2822865 2823527 . + 0 ID=cds-WP_233478661.1;Parent=gene-LU604_RS14970;Dbxref=Genbank:WP_233478661.1;Name=WP_233478661.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192104.1;locus_tag=LU604_RS14970;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_233478661.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2823558 2824034 . + . ID=gene-LU604_RS14975;Name=LU604_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS14975;old_locus_tag=LU604_14975 NZ_CP089942.1 Protein Homology CDS 2823558 2824034 . + 0 ID=cds-WP_016192105.1;Parent=gene-LU604_RS14975;Dbxref=Genbank:WP_016192105.1;Name=WP_016192105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157202.1;locus_tag=LU604_RS14975;product=NUDIX hydrolase;protein_id=WP_016192105.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2824093 2825196 . + . ID=gene-LU604_RS14980;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=LU604_RS14980;old_locus_tag=LU604_14980 NZ_CP089942.1 Protein Homology CDS 2824093 2825196 . + 0 ID=cds-WP_233478662.1;Parent=gene-LU604_RS14980;Dbxref=Genbank:WP_233478662.1;Name=WP_233478662.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192106.1;locus_tag=LU604_RS14980;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_233478662.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2825257 2825901 . + . ID=gene-LU604_RS14985;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=LU604_RS14985;old_locus_tag=LU604_14985 NZ_CP089942.1 Protein Homology CDS 2825257 2825901 . + 0 ID=cds-WP_016192107.1;Parent=gene-LU604_RS14985;Dbxref=Genbank:WP_016192107.1;Name=WP_016192107.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157200.1;locus_tag=LU604_RS14985;product=high frequency lysogenization protein HflD;protein_id=WP_016192107.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2825922 2827292 . + . ID=gene-LU604_RS14990;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=LU604_RS14990;old_locus_tag=LU604_14990 NZ_CP089942.1 Protein Homology CDS 2825922 2827292 . + 0 ID=cds-WP_016192108.1;Parent=gene-LU604_RS14990;Dbxref=Genbank:WP_016192108.1;Name=WP_016192108.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226316.1;locus_tag=LU604_RS14990;product=adenylosuccinate lyase;protein_id=WP_016192108.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2827413 2828084 . + . ID=gene-LU604_RS14995;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=LU604_RS14995;old_locus_tag=LU604_14995 NZ_CP089942.1 Protein Homology CDS 2827413 2828084 . + 0 ID=cds-WP_198292541.1;Parent=gene-LU604_RS14995;Dbxref=Genbank:WP_198292541.1;Name=WP_198292541.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000986522.1;locus_tag=LU604_RS14995;product=two-component system response regulator PhoP;protein_id=WP_198292541.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2828089 2829549 . + . ID=gene-LU604_RS15000;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=LU604_RS15000;old_locus_tag=LU604_15000 NZ_CP089942.1 Protein Homology CDS 2828089 2829549 . + 0 ID=cds-WP_233478663.1;Parent=gene-LU604_RS15000;Dbxref=Genbank:WP_233478663.1;Name=WP_233478663.1;Ontology_term=GO:0000160,GO:0000155,GO:0004673,GO:0016772;gbkey=CDS;gene=phoQ;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192110.1;locus_tag=LU604_RS15000;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_233478663.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2829641 2830768 . + . ID=gene-LU604_RS15005;Name=LU604_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15005;old_locus_tag=LU604_15005 NZ_CP089942.1 Protein Homology CDS 2829641 2830768 . + 0 ID=cds-WP_233478664.1;Parent=gene-LU604_RS15005;Dbxref=Genbank:WP_233478664.1;Name=WP_233478664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157195.1;locus_tag=LU604_RS15005;product=cupin domain-containing protein;protein_id=WP_233478664.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2830868 2832103 . - . ID=gene-LU604_RS15010;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=LU604_RS15010;old_locus_tag=LU604_15010 NZ_CP089942.1 Protein Homology CDS 2830868 2832103 . - 0 ID=cds-WP_233478665.1;Parent=gene-LU604_RS15010;Dbxref=Genbank:WP_233478665.1;Name=WP_233478665.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192112.1;locus_tag=LU604_RS15010;product=peptidase T;protein_id=WP_233478665.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2832200 2832738 . - . ID=gene-LU604_RS15015;Name=LU604_RS15015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15015;old_locus_tag=LU604_15015;pseudo=true NZ_CP089942.1 Protein Homology CDS 2832200 2832738 . - 0 ID=cds-LU604_RS15015;Parent=gene-LU604_RS15015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013366384.1;locus_tag=LU604_RS15015;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2832856 2833867 . + . ID=gene-LU604_RS15020;Name=LU604_RS15020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15020;old_locus_tag=LU604_15020;pseudo=true NZ_CP089942.1 Protein Homology CDS 2832856 2833867 . + 0 ID=cds-LU604_RS15020;Parent=gene-LU604_RS15020;Note=frameshifted%3B internal stop;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892690.1;locus_tag=LU604_RS15020;product=benzoate/H(+) symporter BenE family transporter;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2834059 2834976 . + . ID=gene-LU604_RS15025;Name=LU604_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15025;old_locus_tag=LU604_15025 NZ_CP089942.1 Protein Homology CDS 2834059 2834976 . + 0 ID=cds-WP_233478666.1;Parent=gene-LU604_RS15025;Dbxref=Genbank:WP_233478666.1;Name=WP_233478666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192116.1;locus_tag=LU604_RS15025;product=metal ABC transporter substrate-binding protein;protein_id=WP_233478666.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2834973 2835782 . + . ID=gene-LU604_RS15030;Name=LU604_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15030;old_locus_tag=LU604_15030 NZ_CP089942.1 Protein Homology CDS 2834973 2835782 . + 0 ID=cds-WP_016192117.1;Parent=gene-LU604_RS15030;Dbxref=Genbank:WP_016192117.1;Name=WP_016192117.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170119.1;locus_tag=LU604_RS15030;product=manganese/iron ABC transporter ATP-binding protein;protein_id=WP_016192117.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2835787 2836653 . + . ID=gene-LU604_RS15035;Name=LU604_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15035;old_locus_tag=LU604_15035 NZ_CP089942.1 Protein Homology CDS 2835787 2836653 . + 0 ID=cds-WP_087949726.1;Parent=gene-LU604_RS15035;Dbxref=Genbank:WP_087949726.1;Name=WP_087949726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854338.1;locus_tag=LU604_RS15035;product=metal ABC transporter permease;protein_id=WP_087949726.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2836650 2837513 . + . ID=gene-LU604_RS15040;Name=LU604_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15040;old_locus_tag=LU604_15040 NZ_CP089942.1 Protein Homology CDS 2836650 2837513 . + 0 ID=cds-WP_016192119.1;Parent=gene-LU604_RS15040;Dbxref=Genbank:WP_016192119.1;Name=WP_016192119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480208.1;locus_tag=LU604_RS15040;product=metal ABC transporter permease;protein_id=WP_016192119.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2837564 2838397 . - . ID=gene-LU604_RS15045;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=LU604_RS15045;old_locus_tag=LU604_15045 NZ_CP089942.1 Protein Homology CDS 2837564 2838397 . - 0 ID=cds-WP_040465752.1;Parent=gene-LU604_RS15045;Dbxref=Genbank:WP_040465752.1;Name=WP_040465752.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201702.1;locus_tag=LU604_RS15045;product=NAD-dependent protein deacylase;protein_id=WP_040465752.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2838448 2839692 . - . ID=gene-LU604_RS15050;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=LU604_RS15050;old_locus_tag=LU604_15050 NZ_CP089942.1 Protein Homology CDS 2838448 2839692 . - 0 ID=cds-WP_016192121.1;Parent=gene-LU604_RS15050;Dbxref=Genbank:WP_016192121.1;Name=WP_016192121.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007898419.1;locus_tag=LU604_RS15050;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_016192121.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2839692 2840396 . - . ID=gene-LU604_RS15055;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=LU604_RS15055;old_locus_tag=LU604_15055 NZ_CP089942.1 Protein Homology CDS 2839692 2840396 . - 0 ID=cds-WP_016192122.1;Parent=gene-LU604_RS15055;Dbxref=Genbank:WP_016192122.1;Name=WP_016192122.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007885730.1;locus_tag=LU604_RS15055;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_016192122.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2840389 2841588 . - . ID=gene-LU604_RS15060;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=LU604_RS15060;old_locus_tag=LU604_15060 NZ_CP089942.1 Protein Homology CDS 2840389 2841588 . - 0 ID=cds-WP_016192123.1;Parent=gene-LU604_RS15060;Dbxref=Genbank:WP_016192123.1;Name=WP_016192123.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309521.1;locus_tag=LU604_RS15060;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_016192123.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2841946 2842790 . - . ID=gene-LU604_RS15065;Name=LU604_RS15065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15065;old_locus_tag=LU604_15065;pseudo=true NZ_CP089942.1 Protein Homology CDS 2841946 2842790 . - 0 ID=cds-LU604_RS15065;Parent=gene-LU604_RS15065;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611197.1;locus_tag=LU604_RS15065;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2842828 2843275 . - . ID=gene-LU604_RS15070;Name=LU604_RS15070;end_range=2843275,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15070;old_locus_tag=LU604_15070;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2842828 2843275 . - 0 ID=cds-LU604_RS15070;Parent=gene-LU604_RS15070;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2843275,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917256.1;locus_tag=LU604_RS15070;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2843354 2843665 . - . ID=gene-LU604_RS15075;Name=LU604_RS15075;end_range=2843665,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15075;old_locus_tag=LU604_15075;partial=true;pseudo=true;start_range=.,2843354 NZ_CP089942.1 Protein Homology CDS 2843354 2843665 . - 0 ID=cds-LU604_RS15075;Parent=gene-LU604_RS15075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2843665,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010245123.1;locus_tag=LU604_RS15075;partial=true;product=host specificity protein;pseudo=true;start_range=.,2843354;transl_table=11 NZ_CP089942.1 RefSeq gene 2843936 2844934 . + . ID=gene-LU604_RS15080;Name=LU604_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15080;old_locus_tag=LU604_15080 NZ_CP089942.1 Protein Homology CDS 2843936 2844934 . + 0 ID=cds-WP_233481326.1;Parent=gene-LU604_RS15080;Dbxref=Genbank:WP_233481326.1;Name=WP_233481326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014538763.1;locus_tag=LU604_RS15080;product=hypothetical protein;protein_id=WP_233481326.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2844936 2845340 . + . ID=gene-LU604_RS15085;Name=LU604_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15085;old_locus_tag=LU604_15085 NZ_CP089942.1 Protein Homology CDS 2844936 2845340 . + 0 ID=cds-WP_233481327.1;Parent=gene-LU604_RS15085;Dbxref=Genbank:WP_233481327.1;Name=WP_233481327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192129.1;locus_tag=LU604_RS15085;product=hypothetical protein;protein_id=WP_233481327.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2845374 2845532 . - . ID=gene-LU604_RS15090;Name=LU604_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15090;old_locus_tag=LU604_15090 NZ_CP089942.1 Protein Homology CDS 2845374 2845532 . - 0 ID=cds-WP_233481643.1;Parent=gene-LU604_RS15090;Dbxref=Genbank:WP_233481643.1;Name=WP_233481643.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: protein motif:HMM:NF018262.2;locus_tag=LU604_RS15090;product=antiterminator Q family protein;protein_id=WP_233481643.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2845521 2845754 . - . ID=gene-LU604_RS15095;Name=LU604_RS15095;end_range=2845754,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15095;old_locus_tag=LU604_15095;partial=true;pseudo=true;start_range=.,2845521 NZ_CP089942.1 Protein Homology CDS 2845521 2845754 . - 0 ID=cds-LU604_RS15095;Parent=gene-LU604_RS15095;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2845754,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010245123.1;locus_tag=LU604_RS15095;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2845521;transl_table=11 NZ_CP089942.1 RefSeq gene 2846025 2847035 . + . ID=gene-LU604_RS15100;Name=LU604_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15100;old_locus_tag=LU604_15100 NZ_CP089942.1 Protein Homology CDS 2846025 2847035 . + 0 ID=cds-WP_233481328.1;Parent=gene-LU604_RS15100;Dbxref=Genbank:WP_233481328.1;Name=WP_233481328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169535.1;locus_tag=LU604_RS15100;product=hypothetical protein;protein_id=WP_233481328.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2847474 2847791 . - . ID=gene-LU604_RS15105;Name=LU604_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15105;old_locus_tag=LU604_15105 NZ_CP089942.1 Protein Homology CDS 2847474 2847791 . - 0 ID=cds-WP_233481329.1;Parent=gene-LU604_RS15105;Dbxref=Genbank:WP_233481329.1;Name=WP_233481329.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169531.1;locus_tag=LU604_RS15105;product=antiterminator Q family protein;protein_id=WP_233481329.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2848131 2849142 . + . ID=gene-LU604_RS15110;Name=LU604_RS15110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15110;old_locus_tag=LU604_15110;pseudo=true NZ_CP089942.1 Protein Homology CDS 2848131 2849142 . + 0 ID=cds-LU604_RS15110;Parent=gene-LU604_RS15110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667639.1;locus_tag=LU604_RS15110;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2849146 2849376 . + . ID=gene-LU604_RS15115;Name=LU604_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15115;old_locus_tag=LU604_15115 NZ_CP089942.1 GeneMarkS-2+ CDS 2849146 2849376 . + 0 ID=cds-WP_233478667.1;Parent=gene-LU604_RS15115;Dbxref=Genbank:WP_233478667.1;Name=WP_233478667.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS15115;product=hypothetical protein;protein_id=WP_233478667.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2849633 2850330 . + . ID=gene-LU604_RS15120;Name=LU604_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15120;old_locus_tag=LU604_15120 NZ_CP089942.1 Protein Homology CDS 2849633 2849882 . + 0 ID=cds-WP_233478668.1;Parent=gene-LU604_RS15120;Dbxref=Genbank:WP_233478668.1;Name=WP_233478668.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS15120;product=IS1 family transposase;protein_id=WP_233478668.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2849882 2850330 . + 2 ID=cds-WP_233478668.1;Parent=gene-LU604_RS15120;Dbxref=Genbank:WP_233478668.1;Name=WP_233478668.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS15120;product=IS1 family transposase;protein_id=WP_233478668.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2850596 2850712 . + . ID=gene-LU604_RS15125;Name=LU604_RS15125;end_range=2850712,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15125;old_locus_tag=LU604_15125;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2850596 2850712 . + 0 ID=cds-LU604_RS15125;Parent=gene-LU604_RS15125;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2850712,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077814.1;locus_tag=LU604_RS15125;partial=true;product=phage major capsid protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2850730 2851038 . + . ID=gene-LU604_RS15130;Name=LU604_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15130;old_locus_tag=LU604_15130 NZ_CP089942.1 Protein Homology CDS 2850730 2851038 . + 0 ID=cds-WP_233481644.1;Parent=gene-LU604_RS15130;Dbxref=Genbank:WP_233481644.1;Name=WP_233481644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309624.1;locus_tag=LU604_RS15130;product=phage terminase small subunit P27 family;protein_id=WP_233481644.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2851022 2852679 . + . ID=gene-LU604_RS15135;Name=LU604_RS15135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15135;old_locus_tag=LU604_15135;pseudo=true NZ_CP089942.1 Protein Homology CDS 2851022 2852679 . + 0 ID=cds-LU604_RS15135;Parent=gene-LU604_RS15135;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229104.1;locus_tag=LU604_RS15135;product=terminase large subunit;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2853001 2853168 . + . ID=gene-LU604_RS15140;Name=LU604_RS15140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15140;old_locus_tag=LU604_15140;partial=true;pseudo=true;start_range=.,2853001 NZ_CP089942.1 Protein Homology CDS 2853001 2853168 . + 0 ID=cds-LU604_RS15140;Parent=gene-LU604_RS15140;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS15140;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,2853001;transl_table=11 NZ_CP089942.1 RefSeq gene 2853207 2853632 . - . ID=gene-LU604_RS15145;Name=LU604_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15145;old_locus_tag=LU604_15145 NZ_CP089942.1 Protein Homology CDS 2853207 2853632 . - 0 ID=cds-WP_233478669.1;Parent=gene-LU604_RS15145;Dbxref=Genbank:WP_233478669.1;Name=WP_233478669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118707.1;locus_tag=LU604_RS15145;product=antitermination protein;protein_id=WP_233478669.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2853980 2854240 . - . ID=gene-LU604_RS15150;Name=LU604_RS15150;end_range=2854240,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15150;old_locus_tag=LU604_15150;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2853980 2854240 . - 0 ID=cds-LU604_RS15150;Parent=gene-LU604_RS15150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2854240,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191199.1;locus_tag=LU604_RS15150;partial=true;product=recombination protein NinB;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2854342 2854517 . + . ID=gene-LU604_RS15155;Name=LU604_RS15155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15155;old_locus_tag=LU604_15155;partial=true;pseudo=true;start_range=.,2854342 NZ_CP089942.1 Protein Homology CDS 2854342 2854517 . + 0 ID=cds-LU604_RS15155;Parent=gene-LU604_RS15155;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533668.1;locus_tag=LU604_RS15155;partial=true;product=integrase;pseudo=true;start_range=.,2854342;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2854566 2854747 . + . ID=gene-LU604_RS15160;Name=LU604_RS15160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15160;old_locus_tag=LU604_15160;pseudo=true NZ_CP089942.1 Protein Homology CDS 2854566 2854747 . + 0 ID=cds-LU604_RS15160;Parent=gene-LU604_RS15160;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008103029.1;locus_tag=LU604_RS15160;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2854830 2858273 . + . ID=gene-LU604_RS15165;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=LU604_RS15165;old_locus_tag=LU604_15165 NZ_CP089942.1 Protein Homology CDS 2854830 2858273 . + 0 ID=cds-WP_233478670.1;Parent=gene-LU604_RS15165;Dbxref=Genbank:WP_233478670.1;Name=WP_233478670.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192139.1;locus_tag=LU604_RS15165;product=transcription-repair coupling factor;protein_id=WP_233478670.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2858861 2859400 . - . ID=gene-LU604_RS15170;Name=LU604_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15170;old_locus_tag=LU604_15170 NZ_CP089942.1 Protein Homology CDS 2858861 2859400 . - 0 ID=cds-WP_233478671.1;Parent=gene-LU604_RS15170;Dbxref=Genbank:WP_233478671.1;Name=WP_233478671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121097.1;locus_tag=LU604_RS15170;product=glycine zipper 2TM domain-containing protein;protein_id=WP_233478671.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2859686 2860978 . - . ID=gene-LU604_RS15175;Name=LU604_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15175;old_locus_tag=LU604_15175 NZ_CP089942.1 Protein Homology CDS 2859686 2860978 . - 0 ID=cds-WP_233478672.1;Parent=gene-LU604_RS15175;Dbxref=Genbank:WP_233478672.1;Name=WP_233478672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373018.1;locus_tag=LU604_RS15175;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_233478672.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2861313 2862161 . - . ID=gene-LU604_RS15180;Name=LU604_RS15180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15180;old_locus_tag=LU604_15180;pseudo=true NZ_CP089942.1 Protein Homology CDS 2861313 2862161 . - 0 ID=cds-LU604_RS15180;Parent=gene-LU604_RS15180;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS15180;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2862221 2862781 . - . ID=gene-LU604_RS15185;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=LU604_RS15185;old_locus_tag=LU604_15185 NZ_CP089942.1 Protein Homology CDS 2862221 2862781 . - 0 ID=cds-WP_016192143.1;Parent=gene-LU604_RS15185;Dbxref=Genbank:WP_016192143.1;Name=WP_016192143.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012765221.1;locus_tag=LU604_RS15185;product=alpha/beta hydrolase YcfP;protein_id=WP_016192143.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2862810 2863838 . - . ID=gene-LU604_RS15190;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=LU604_RS15190;old_locus_tag=LU604_15190 NZ_CP089942.1 Protein Homology CDS 2862810 2863838 . - 0 ID=cds-WP_233478673.1;Parent=gene-LU604_RS15190;Dbxref=Genbank:WP_233478673.1;Name=WP_233478673.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201692.1;locus_tag=LU604_RS15190;product=beta-N-acetylhexosaminidase;protein_id=WP_233478673.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2863848 2864717 . - . ID=gene-LU604_RS15195;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=LU604_RS15195;old_locus_tag=LU604_15195 NZ_CP089942.1 Protein Homology CDS 2863848 2864717 . - 0 ID=cds-WP_233478674.1;Parent=gene-LU604_RS15195;Dbxref=Genbank:WP_233478674.1;Name=WP_233478674.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539058.1;locus_tag=LU604_RS15195;product=thiamine kinase;protein_id=WP_233478674.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2864677 2865243 . - . ID=gene-LU604_RS15200;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=LU604_RS15200;old_locus_tag=LU604_15200 NZ_CP089942.1 Protein Homology CDS 2864677 2865243 . - 0 ID=cds-WP_233480807.1;Parent=gene-LU604_RS15200;Dbxref=Genbank:WP_233480807.1;Name=WP_233480807.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192146.1;locus_tag=LU604_RS15200;product=penicillin-binding protein activator LpoB;protein_id=WP_233480807.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2865285 2865632 . - . ID=gene-LU604_RS15205;Name=LU604_RS15205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15205;old_locus_tag=LU604_15205;pseudo=true NZ_CP089942.1 Protein Homology CDS 2865285 2865632 . - 0 ID=cds-LU604_RS15205;Parent=gene-LU604_RS15205;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010669861.1;locus_tag=LU604_RS15205;product=YcfL family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2865682 2866032 . - . ID=gene-LU604_RS15210;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=LU604_RS15210;old_locus_tag=LU604_15210 NZ_CP089942.1 Protein Homology CDS 2865682 2866032 . - 0 ID=cds-WP_233478675.1;Parent=gene-LU604_RS15210;Dbxref=Genbank:WP_233478675.1;Name=WP_233478675.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192148.1;locus_tag=LU604_RS15210;product=purine nucleoside phosphoramidase;protein_id=WP_233478675.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2866223 2867656 . - . ID=gene-LU604_RS15215;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=LU604_RS15215;old_locus_tag=LU604_15215 NZ_CP089942.1 Protein Homology CDS 2866223 2867656 . - 0 ID=cds-WP_233478676.1;Parent=gene-LU604_RS15215;Dbxref=Genbank:WP_233478676.1;Name=WP_233478676.1;Ontology_term=GO:0009401,GO:1904659,GO:0005355,GO:0008982;gbkey=CDS;gene=ptsG;go_function=glucose transmembrane transporter activity|0005355||IEA,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849857.1;locus_tag=LU604_RS15215;product=PTS glucose transporter subunit IIBC;protein_id=WP_233478676.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2867914 2868708 . - . ID=gene-LU604_RS15220;Name=LU604_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15220;old_locus_tag=LU604_15220 NZ_CP089942.1 Protein Homology CDS 2867914 2868708 . - 0 ID=cds-WP_233478677.1;Parent=gene-LU604_RS15220;Dbxref=Genbank:WP_233478677.1;Name=WP_233478677.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192150.1;locus_tag=LU604_RS15220;product=metal-dependent hydrolase;protein_id=WP_233478677.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2868719 2869714 . - . ID=gene-LU604_RS15225;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=LU604_RS15225;old_locus_tag=LU604_15225 NZ_CP089942.1 Protein Homology CDS 2868719 2869714 . - 0 ID=cds-WP_016192151.1;Parent=gene-LU604_RS15225;Dbxref=Genbank:WP_016192151.1;Name=WP_016192151.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holB;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543996.1;locus_tag=LU604_RS15225;product=DNA polymerase III subunit delta';protein_id=WP_016192151.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2869711 2870343 . - . ID=gene-LU604_RS15230;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=LU604_RS15230;old_locus_tag=LU604_15230 NZ_CP089942.1 Protein Homology CDS 2869711 2870343 . - 0 ID=cds-WP_016192152.1;Parent=gene-LU604_RS15230;Dbxref=Genbank:WP_016192152.1;Name=WP_016192152.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157127.1;locus_tag=LU604_RS15230;product=dTMP kinase;protein_id=WP_016192152.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2870333 2871352 . - . ID=gene-LU604_RS15235;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=LU604_RS15235;old_locus_tag=LU604_15235 NZ_CP089942.1 Protein Homology CDS 2870333 2871352 . - 0 ID=cds-WP_233478678.1;Parent=gene-LU604_RS15235;Dbxref=Genbank:WP_233478678.1;Name=WP_233478678.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593430.1;locus_tag=LU604_RS15235;product=cell division protein YceG;protein_id=WP_233478678.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2871364 2872158 . - . ID=gene-LU604_RS15240;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=LU604_RS15240;old_locus_tag=LU604_15240 NZ_CP089942.1 Protein Homology CDS 2871364 2872158 . - 0 ID=cds-WP_016192154.1;Parent=gene-LU604_RS15240;Dbxref=Genbank:WP_016192154.1;Name=WP_016192154.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118835.1;locus_tag=LU604_RS15240;product=aminodeoxychorismate lyase;protein_id=WP_016192154.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2872395 2873636 . - . ID=gene-LU604_RS15245;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LU604_RS15245;old_locus_tag=LU604_15245 NZ_CP089942.1 Protein Homology CDS 2872395 2873636 . - 0 ID=cds-WP_233478679.1;Parent=gene-LU604_RS15245;Dbxref=Genbank:WP_233478679.1;Name=WP_233478679.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=LU604_RS15245;product=beta-ketoacyl-ACP synthase II;protein_id=WP_233478679.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2873720 2873956 . - . ID=gene-LU604_RS15250;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=LU604_RS15250;old_locus_tag=LU604_15250 NZ_CP089942.1 Protein Homology CDS 2873720 2873956 . - 0 ID=cds-WP_016192156.1;Parent=gene-LU604_RS15250;Dbxref=Genbank:WP_016192156.1;Name=WP_016192156.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=LU604_RS15250;product=acyl carrier protein;protein_id=WP_016192156.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2874111 2874845 . - . ID=gene-LU604_RS15255;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LU604_RS15255;old_locus_tag=LU604_15255 NZ_CP089942.1 Protein Homology CDS 2874111 2874845 . - 0 ID=cds-WP_016192157.1;Parent=gene-LU604_RS15255;Dbxref=Genbank:WP_016192157.1;Name=WP_016192157.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=LU604_RS15255;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_016192157.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2874867 2875790 . - . ID=gene-LU604_RS15260;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=LU604_RS15260;old_locus_tag=LU604_15260 NZ_CP089942.1 Protein Homology CDS 2874867 2875790 . - 0 ID=cds-WP_016192158.1;Parent=gene-LU604_RS15260;Dbxref=Genbank:WP_016192158.1;Name=WP_016192158.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201678.1;locus_tag=LU604_RS15260;product=ACP S-malonyltransferase;protein_id=WP_016192158.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2875807 2876760 . - . ID=gene-LU604_RS15265;Name=LU604_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15265;old_locus_tag=LU604_15265 NZ_CP089942.1 Protein Homology CDS 2875807 2876760 . - 0 ID=cds-WP_233478680.1;Parent=gene-LU604_RS15265;Dbxref=Genbank:WP_233478680.1;Name=WP_233478680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011093371.1;locus_tag=LU604_RS15265;product=ketoacyl-ACP synthase III;protein_id=WP_233478680.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2876767 2877801 . - . ID=gene-LU604_RS15270;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=LU604_RS15270;old_locus_tag=LU604_15270 NZ_CP089942.1 Protein Homology CDS 2876767 2877801 . - 0 ID=cds-WP_233478681.1;Parent=gene-LU604_RS15270;Dbxref=Genbank:WP_233478681.1;Name=WP_233478681.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210932.1;locus_tag=LU604_RS15270;product=phosphate acyltransferase PlsX;protein_id=WP_233478681.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2877825 2877995 . - . ID=gene-LU604_RS15275;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=LU604_RS15275;old_locus_tag=LU604_15275 NZ_CP089942.1 Protein Homology CDS 2877825 2877995 . - 0 ID=cds-WP_016192161.1;Parent=gene-LU604_RS15275;Dbxref=Genbank:WP_016192161.1;Name=WP_016192161.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147057.1;locus_tag=LU604_RS15275;product=50S ribosomal protein L32;protein_id=WP_016192161.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2878010 2878531 . - . ID=gene-LU604_RS15280;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=LU604_RS15280;old_locus_tag=LU604_15280 NZ_CP089942.1 Protein Homology CDS 2878010 2878531 . - 0 ID=cds-WP_233478682.1;Parent=gene-LU604_RS15280;Dbxref=Genbank:WP_233478682.1;Name=WP_233478682.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=LU604_RS15280;product=23S rRNA accumulation protein YceD;protein_id=WP_233478682.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2878674 2879258 . + . ID=gene-LU604_RS15285;Name=LU604_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15285;old_locus_tag=LU604_15285 NZ_CP089942.1 Protein Homology CDS 2878674 2879258 . + 0 ID=cds-WP_233478683.1;Parent=gene-LU604_RS15285;Dbxref=Genbank:WP_233478683.1;Name=WP_233478683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192163.1;locus_tag=LU604_RS15285;product=Maf family protein;protein_id=WP_233478683.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2879301 2880263 . - . ID=gene-LU604_RS15290;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=LU604_RS15290;old_locus_tag=LU604_15290 NZ_CP089942.1 Protein Homology CDS 2879301 2880263 . - 0 ID=cds-WP_016192164.1;Parent=gene-LU604_RS15290;Dbxref=Genbank:WP_016192164.1;Name=WP_016192164.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201672.1;locus_tag=LU604_RS15290;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_016192164.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2880833 2884114 . + . ID=gene-LU604_RS15295;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=LU604_RS15295;old_locus_tag=LU604_15295 NZ_CP089942.1 Protein Homology CDS 2880833 2884114 . + 0 ID=cds-WP_233478684.1;Parent=gene-LU604_RS15295;Dbxref=Genbank:WP_233478684.1;Name=WP_233478684.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192165.1;locus_tag=LU604_RS15295;product=ribonuclease E;protein_id=WP_233478684.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2884279 2884704 . + . ID=gene-LU604_RS15300;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS15300;old_locus_tag=LU604_15300 NZ_CP089942.1 Protein Homology CDS 2884279 2884704 . + 0 ID=cds-WP_233478685.1;Parent=gene-LU604_RS15300;Dbxref=Genbank:WP_233478685.1;Name=WP_233478685.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190995.1;locus_tag=LU604_RS15300;product=IS200/IS605 family transposase;protein_id=WP_233478685.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2885044 2885574 . - . ID=gene-LU604_RS15305;Name=LU604_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15305;old_locus_tag=LU604_15305 NZ_CP089942.1 Protein Homology CDS 2885044 2885574 . - 0 ID=cds-WP_233478686.1;Parent=gene-LU604_RS15305;Dbxref=Genbank:WP_233478686.1;Name=WP_233478686.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037026.2;locus_tag=LU604_RS15305;product=hypothetical protein;protein_id=WP_233478686.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2885603 2886565 . - . ID=gene-LU604_RS15310;Name=cbl;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;locus_tag=LU604_RS15310;old_locus_tag=LU604_15310 NZ_CP089942.1 Protein Homology CDS 2885603 2886565 . - 0 ID=cds-WP_016192168.1;Parent=gene-LU604_RS15310;Dbxref=Genbank:WP_016192168.1;Name=WP_016192168.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cbl;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015583978.1;locus_tag=LU604_RS15310;product=HTH-type transcriptional regulator Cbl;protein_id=WP_016192168.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2887228 2888363 . + . ID=gene-LU604_RS15315;Name=LU604_RS15315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15315;old_locus_tag=LU604_15315;pseudo=true NZ_CP089942.1 Protein Homology CDS 2887228 2888363 . + 0 ID=cds-LU604_RS15315;Parent=gene-LU604_RS15315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192169.1;locus_tag=LU604_RS15315;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2888705 2890156 . + . ID=gene-LU604_RS15320;Name=LU604_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15320;old_locus_tag=LU604_15320 NZ_CP089942.1 Protein Homology CDS 2888705 2890156 . + 0 ID=cds-WP_233478687.1;Parent=gene-LU604_RS15320;Dbxref=Genbank:WP_233478687.1;Name=WP_233478687.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667762.1;locus_tag=LU604_RS15320;product=AMP nucleosidase;protein_id=WP_233478687.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2890575 2890650 . + . ID=gene-LU604_RS15325;Name=LU604_RS15325;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS15325;old_locus_tag=LU604_15325 NZ_CP089942.1 tRNAscan-SE tRNA 2890575 2890650 . + . ID=rna-LU604_RS15325;Parent=gene-LU604_RS15325;anticodon=(pos:2890608..2890610);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS15325;product=tRNA-Asn NZ_CP089942.1 tRNAscan-SE exon 2890575 2890650 . + . ID=exon-LU604_RS15325-1;Parent=rna-LU604_RS15325;anticodon=(pos:2890608..2890610);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS15325;product=tRNA-Asn NZ_CP089942.1 RefSeq gene 2890828 2892036 . + . ID=gene-LU604_RS15330;Name=LU604_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15330;old_locus_tag=LU604_15330 NZ_CP089942.1 Protein Homology CDS 2890828 2892036 . + 0 ID=cds-WP_233478688.1;Parent=gene-LU604_RS15330;Dbxref=Genbank:WP_233478688.1;Name=WP_233478688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=LU604_RS15330;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_233478688.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2892279 2892608 . + . ID=gene-LU604_RS15335;Name=LU604_RS15335;end_range=2892608,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15335;old_locus_tag=LU604_15335;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2892279 2892608 . + 0 ID=cds-LU604_RS15335;Parent=gene-LU604_RS15335;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2892608,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239317.1;locus_tag=LU604_RS15335;partial=true;product=site-specific DNA-methyltransferase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2892626 2893323 . - . ID=gene-LU604_RS15340;Name=LU604_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15340;old_locus_tag=LU604_15340 NZ_CP089942.1 Protein Homology CDS 2893074 2893323 . - 0 ID=cds-WP_233478689.1;Parent=gene-LU604_RS15340;Dbxref=Genbank:WP_233478689.1;Name=WP_233478689.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS15340;product=IS1 family transposase;protein_id=WP_233478689.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2892626 2893074 . - 2 ID=cds-WP_233478689.1;Parent=gene-LU604_RS15340;Dbxref=Genbank:WP_233478689.1;Name=WP_233478689.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS15340;product=IS1 family transposase;protein_id=WP_233478689.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2893369 2894007 . - . ID=gene-LU604_RS15345;Name=LU604_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15345;old_locus_tag=LU604_15345 NZ_CP089942.1 GeneMarkS-2+ CDS 2893369 2894007 . - 0 ID=cds-WP_233478690.1;Parent=gene-LU604_RS15345;Dbxref=Genbank:WP_233478690.1;Name=WP_233478690.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS15345;product=hypothetical protein;protein_id=WP_233478690.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2894091 2894386 . + . ID=gene-LU604_RS15350;Name=LU604_RS15350;end_range=2894386,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15350;old_locus_tag=LU604_15350;partial=true;pseudo=true;start_range=.,2894091 NZ_CP089942.1 Protein Homology CDS 2894091 2894386 . + 0 ID=cds-LU604_RS15350;Parent=gene-LU604_RS15350;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2894386,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU604_RS15350;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,2894091;transl_table=11 NZ_CP089942.1 RefSeq gene 2894482 2895360 . - . ID=gene-LU604_RS15355;Name=LU604_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15355;old_locus_tag=LU604_15355 NZ_CP089942.1 Protein Homology CDS 2894482 2895360 . - 0 ID=cds-WP_233478691.1;Parent=gene-LU604_RS15355;Dbxref=Genbank:WP_233478691.1;Name=WP_233478691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511286.1;locus_tag=LU604_RS15355;product=permease;protein_id=WP_233478691.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2895357 2896805 . - . ID=gene-LU604_RS15360;Name=LU604_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15360;old_locus_tag=LU604_15360 NZ_CP089942.1 Protein Homology CDS 2895357 2896805 . - 0 ID=cds-WP_016192182.1;Parent=gene-LU604_RS15360;Dbxref=Genbank:WP_016192182.1;Name=WP_016192182.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024846.2;locus_tag=LU604_RS15360;product=FAD/NAD(P)-binding protein;protein_id=WP_016192182.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2897338 2897559 . + . ID=gene-LU604_RS15365;Name=LU604_RS15365;end_range=2897559,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15365;old_locus_tag=LU604_15365;partial=true;pseudo=true;start_range=.,2897338 NZ_CP089942.1 Protein Homology CDS 2897338 2897559 . + 0 ID=cds-LU604_RS15365;Parent=gene-LU604_RS15365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2897559,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917256.1;locus_tag=LU604_RS15365;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,2897338;transl_table=11 NZ_CP089942.1 RefSeq gene 2897556 2898017 . - . ID=gene-LU604_RS15370;Name=LU604_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15370;old_locus_tag=LU604_15370 NZ_CP089942.1 Protein Homology CDS 2897556 2898017 . - 0 ID=cds-WP_016192184.1;Parent=gene-LU604_RS15370;Dbxref=Genbank:WP_016192184.1;Name=WP_016192184.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025113.2;locus_tag=LU604_RS15370;product=IS5/IS1182 family transposase;protein_id=WP_016192184.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2898163 2898393 . + . ID=gene-LU604_RS15375;Name=LU604_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15375;old_locus_tag=LU604_15375 NZ_CP089942.1 GeneMarkS-2+ CDS 2898163 2898393 . + 0 ID=cds-WP_233481330.1;Parent=gene-LU604_RS15375;Dbxref=Genbank:WP_233481330.1;Name=WP_233481330.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS15375;product=hypothetical protein;protein_id=WP_233481330.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2898593 2899867 . + . ID=gene-LU604_RS15380;Name=LU604_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15380;old_locus_tag=LU604_15380 NZ_CP089942.1 Protein Homology CDS 2898593 2899867 . + 0 ID=cds-WP_051124400.1;Parent=gene-LU604_RS15380;Dbxref=Genbank:WP_051124400.1;Name=WP_051124400.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024826.2;locus_tag=LU604_RS15380;product=SidA/IucD/PvdA family monooxygenase;protein_id=WP_051124400.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2899877 2901364 . + . ID=gene-LU604_RS15385;Name=LU604_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15385;old_locus_tag=LU604_15385 NZ_CP089942.1 Protein Homology CDS 2899877 2901364 . + 0 ID=cds-WP_016192187.1;Parent=gene-LU604_RS15385;Dbxref=Genbank:WP_016192187.1;Name=WP_016192187.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: protein motif:HMM:NF020892.2;locus_tag=LU604_RS15385;product=class I tRNA ligase family protein;protein_id=WP_016192187.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2901373 2901684 . + . ID=gene-LU604_RS15390;Name=LU604_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15390;old_locus_tag=LU604_15390 NZ_CP089942.1 Protein Homology CDS 2901373 2901684 . + 0 ID=cds-WP_233478693.1;Parent=gene-LU604_RS15390;Dbxref=Genbank:WP_233478693.1;Name=WP_233478693.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019498.2;locus_tag=LU604_RS15390;product=cupin domain-containing protein;protein_id=WP_233478693.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2901677 2902834 . + . ID=gene-LU604_RS15395;Name=LU604_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15395;old_locus_tag=LU604_15395 NZ_CP089942.1 Protein Homology CDS 2901677 2902834 . + 0 ID=cds-WP_233478694.1;Parent=gene-LU604_RS15395;Dbxref=Genbank:WP_233478694.1;Name=WP_233478694.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013434.2;locus_tag=LU604_RS15395;product=FAD-dependent oxidoreductase;protein_id=WP_233478694.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2902938 2903635 . - . ID=gene-LU604_RS15400;Name=LU604_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15400;old_locus_tag=LU604_15400 NZ_CP089942.1 Protein Homology CDS 2903386 2903635 . - 0 ID=cds-WP_233478695.1;Parent=gene-LU604_RS15400;Dbxref=Genbank:WP_233478695.1;Name=WP_233478695.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU604_RS15400;product=IS1 family transposase;protein_id=WP_233478695.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2902938 2903386 . - 2 ID=cds-WP_233478695.1;Parent=gene-LU604_RS15400;Dbxref=Genbank:WP_233478695.1;Name=WP_233478695.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU604_RS15400;product=IS1 family transposase;protein_id=WP_233478695.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2903709 2903945 . - . ID=gene-LU604_RS15405;Name=LU604_RS15405;end_range=2903945,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15405;old_locus_tag=LU604_15405;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2903709 2903945 . - 0 ID=cds-LU604_RS15405;Parent=gene-LU604_RS15405;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2903945,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365374.1;locus_tag=LU604_RS15405;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2904064 2904252 . + . ID=gene-LU604_RS15410;Name=LU604_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15410;old_locus_tag=LU604_15410 NZ_CP089942.1 Protein Homology CDS 2904064 2904252 . + 0 ID=cds-WP_233478696.1-2;Parent=gene-LU604_RS15410;Dbxref=Genbank:WP_233478696.1;Name=WP_233478696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322936.1;locus_tag=LU604_RS15410;product=hypothetical protein;protein_id=WP_233478696.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2904350 2905672 . + . ID=gene-LU604_RS15415;Name=LU604_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15415;old_locus_tag=LU604_15415 NZ_CP089942.1 Protein Homology CDS 2904350 2905672 . + 0 ID=cds-WP_233478697.1;Parent=gene-LU604_RS15415;Dbxref=Genbank:WP_233478697.1;Name=WP_233478697.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU604_RS15415;product=IS4 family transposase;protein_id=WP_233478697.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2905687 2906886 . + . ID=gene-LU604_RS15420;Name=LU604_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15420;old_locus_tag=LU604_15420 NZ_CP089942.1 Protein Homology CDS 2905687 2906886 . + 0 ID=cds-WP_233478723.1-3;Parent=gene-LU604_RS15420;Dbxref=Genbank:WP_233478723.1;Name=WP_233478723.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS15420;product=IS91 family transposase;protein_id=WP_233478723.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2907058 2907852 . - . ID=gene-LU604_RS15425;Name=LU604_RS15425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15425;old_locus_tag=LU604_15425;partial=true;pseudo=true;start_range=.,2907058 NZ_CP089942.1 Protein Homology CDS 2907058 2907852 . - 0 ID=cds-LU604_RS15425;Parent=gene-LU604_RS15425;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383022.1;locus_tag=LU604_RS15425;partial=true;product=phage terminase large subunit;pseudo=true;start_range=.,2907058;transl_table=11 NZ_CP089942.1 RefSeq gene 2907849 2908283 . - . ID=gene-LU604_RS15430;Name=LU604_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15430;old_locus_tag=LU604_15430 NZ_CP089942.1 Protein Homology CDS 2907849 2908283 . - 0 ID=cds-WP_233481331.1-2;Parent=gene-LU604_RS15430;Dbxref=Genbank:WP_233481331.1;Name=WP_233481331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383023.1;locus_tag=LU604_RS15430;product=ubiquitin carboxyl-hydrolase;protein_id=WP_233481331.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2908487 2908678 . - . ID=gene-LU604_RS15435;Name=LU604_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15435;old_locus_tag=LU604_15435 NZ_CP089942.1 GeneMarkS-2+ CDS 2908487 2908678 . - 0 ID=cds-WP_016191190.1-2;Parent=gene-LU604_RS15435;Dbxref=Genbank:WP_016191190.1;Name=WP_016191190.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS15435;product=hypothetical protein;protein_id=WP_016191190.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2909111 2909392 . - . ID=gene-LU604_RS15440;Name=LU604_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15440;old_locus_tag=LU604_15440 NZ_CP089942.1 GeneMarkS-2+ CDS 2909111 2909392 . - 0 ID=cds-WP_016191191.1-2;Parent=gene-LU604_RS15440;Dbxref=Genbank:WP_016191191.1;Name=WP_016191191.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS15440;product=hypothetical protein;protein_id=WP_016191191.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2909389 2909733 . - . ID=gene-LU604_RS15445;Name=LU604_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15445;old_locus_tag=LU604_15445 NZ_CP089942.1 Protein Homology CDS 2909389 2909733 . - 0 ID=cds-WP_016191192.1;Parent=gene-LU604_RS15445;Dbxref=Genbank:WP_016191192.1;Name=WP_016191192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136191.1;locus_tag=LU604_RS15445;product=hypothetical protein;protein_id=WP_016191192.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2909730 2910197 . - . ID=gene-LU604_RS15450;Name=LU604_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15450;old_locus_tag=LU604_15450 NZ_CP089942.1 Protein Homology CDS 2909730 2910197 . - 0 ID=cds-WP_016191193.1-2;Parent=gene-LU604_RS15450;Dbxref=Genbank:WP_016191193.1;Name=WP_016191193.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008108958.1;locus_tag=LU604_RS15450;product=glycoside hydrolase family protein;protein_id=WP_016191193.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2910194 2910496 . - . ID=gene-LU604_RS15455;Name=LU604_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15455;old_locus_tag=LU604_15455 NZ_CP089942.1 Protein Homology CDS 2910194 2910496 . - 0 ID=cds-WP_016191194.1-2;Parent=gene-LU604_RS15455;Dbxref=Genbank:WP_016191194.1;Name=WP_016191194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008926859.1;locus_tag=LU604_RS15455;product=hypothetical protein;protein_id=WP_016191194.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2910493 2910864 . - . ID=gene-LU604_RS15460;Name=LU604_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15460;old_locus_tag=LU604_15460 NZ_CP089942.1 Protein Homology CDS 2910493 2910864 . - 0 ID=cds-WP_016191195.1-2;Parent=gene-LU604_RS15460;Dbxref=Genbank:WP_016191195.1;Name=WP_016191195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891426.1;locus_tag=LU604_RS15460;product=hypothetical protein;protein_id=WP_016191195.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2911303 2912088 . - . ID=gene-LU604_RS15465;Name=LU604_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15465;old_locus_tag=LU604_15465 NZ_CP089942.1 Protein Homology CDS 2911303 2912088 . - 0 ID=cds-WP_233481332.1-2;Parent=gene-LU604_RS15465;Dbxref=Genbank:WP_233481332.1;Name=WP_233481332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750874.1;locus_tag=LU604_RS15465;product=Bro-N domain-containing protein;protein_id=WP_233481332.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2912383 2912532 . - . ID=gene-LU604_RS15470;Name=LU604_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15470;old_locus_tag=LU604_15470 NZ_CP089942.1 Protein Homology CDS 2912383 2912532 . - 0 ID=cds-WP_233481641.1-2;Parent=gene-LU604_RS15470;Dbxref=Genbank:WP_233481641.1;Name=WP_233481641.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000809168.1;locus_tag=LU604_RS15470;product=Hok/Gef family protein;protein_id=WP_233481641.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2912711 2913100 . - . ID=gene-LU604_RS15475;Name=LU604_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15475;old_locus_tag=LU604_15475 NZ_CP089942.1 Protein Homology CDS 2912711 2913100 . - 0 ID=cds-WP_016191198.1-2;Parent=gene-LU604_RS15475;Dbxref=Genbank:WP_016191198.1;Name=WP_016191198.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215636.1;locus_tag=LU604_RS15475;product=antiterminator Q family protein;protein_id=WP_016191198.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2913192 2913587 . - . ID=gene-LU604_RS15480;Name=LU604_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15480;old_locus_tag=LU604_15480 NZ_CP089942.1 Protein Homology CDS 2913192 2913587 . - 0 ID=cds-WP_233478700.1-2;Parent=gene-LU604_RS15480;Dbxref=Genbank:WP_233478700.1;Name=WP_233478700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132746.1;locus_tag=LU604_RS15480;product=hypothetical protein;protein_id=WP_233478700.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2913584 2913946 . - . ID=gene-LU604_RS15485;Name=rusA;gbkey=Gene;gene=rusA;gene_biotype=protein_coding;locus_tag=LU604_RS15485;old_locus_tag=LU604_15485 NZ_CP089942.1 Protein Homology CDS 2913584 2913946 . - 0 ID=cds-WP_233478701.1-2;Parent=gene-LU604_RS15485;Dbxref=Genbank:WP_233478701.1;Name=WP_233478701.1;Ontology_term=GO:0006281,GO:0006310,GO:0008821;gbkey=CDS;gene=rusA;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001008185.1;locus_tag=LU604_RS15485;product=crossover junction endodeoxyribonuclease RusA;protein_id=WP_233478701.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2913943 2914236 . - . ID=gene-LU604_RS15490;Name=LU604_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15490;old_locus_tag=LU604_15490 NZ_CP089942.1 Protein Homology CDS 2913943 2914236 . - 0 ID=cds-WP_233480809.1-2;Parent=gene-LU604_RS15490;Dbxref=Genbank:WP_233480809.1;Name=WP_233480809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004139422.1;locus_tag=LU604_RS15490;product=DUF1364 domain-containing protein;protein_id=WP_233480809.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2914239 2914439 . - . ID=gene-LU604_RS15495;Name=LU604_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15495;old_locus_tag=LU604_15495 NZ_CP089942.1 Protein Homology CDS 2914239 2914439 . - 0 ID=cds-WP_233481333.1;Parent=gene-LU604_RS15495;Dbxref=Genbank:WP_233481333.1;Name=WP_233481333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456842.1;locus_tag=LU604_RS15495;product=hypothetical protein;protein_id=WP_233481333.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2914779 2915819 . + . ID=gene-LU604_RS15500;Name=LU604_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15500;old_locus_tag=LU604_15500 NZ_CP089942.1 Protein Homology CDS 2914779 2915819 . + 0 ID=cds-WP_046371813.1-2;Parent=gene-LU604_RS15500;Dbxref=Genbank:WP_046371813.1;Name=WP_046371813.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS15500;product=IS481 family transposase;protein_id=WP_046371813.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2915959 2916279 . - . ID=gene-LU604_RS15505;Name=LU604_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15505;old_locus_tag=LU604_15505 NZ_CP089942.1 Protein Homology CDS 2915959 2916279 . - 0 ID=cds-WP_233478702.1;Parent=gene-LU604_RS15505;Dbxref=Genbank:WP_233478702.1;Name=WP_233478702.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192085.1;locus_tag=LU604_RS15505;product=phage holin%2C lambda family;protein_id=WP_233478702.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2916364 2916576 . - . ID=gene-LU604_RS15510;Name=LU604_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15510;old_locus_tag=LU604_15510 NZ_CP089942.1 GeneMarkS-2+ CDS 2916364 2916576 . - 0 ID=cds-WP_233478703.1;Parent=gene-LU604_RS15510;Dbxref=Genbank:WP_233478703.1;Name=WP_233478703.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS15510;product=hypothetical protein;protein_id=WP_233478703.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2916661 2917032 . - . ID=gene-LU604_RS15515;Name=LU604_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15515;old_locus_tag=LU604_15515 NZ_CP089942.1 Protein Homology CDS 2916661 2917032 . - 0 ID=cds-WP_233478704.1;Parent=gene-LU604_RS15515;Dbxref=Genbank:WP_233478704.1;Name=WP_233478704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124471.1;locus_tag=LU604_RS15515;product=hypothetical protein;protein_id=WP_233478704.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2917033 2917221 . - . ID=gene-LU604_RS15520;Name=LU604_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15520;old_locus_tag=LU604_15520 NZ_CP089942.1 GeneMarkS-2+ CDS 2917033 2917221 . - 0 ID=cds-WP_233481334.1;Parent=gene-LU604_RS15520;Dbxref=Genbank:WP_233481334.1;Name=WP_233481334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS15520;product=hypothetical protein;protein_id=WP_233481334.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2917610 2918032 . - . ID=gene-LU604_RS15525;Name=LU604_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15525;old_locus_tag=LU604_15525 NZ_CP089942.1 Protein Homology CDS 2917610 2918032 . - 0 ID=cds-WP_233478705.1;Parent=gene-LU604_RS15525;Dbxref=Genbank:WP_233478705.1;Name=WP_233478705.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191132.1;locus_tag=LU604_RS15525;product=antiterminator Q family protein;protein_id=WP_233478705.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2918077 2918367 . - . ID=gene-LU604_RS15530;Name=LU604_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15530;old_locus_tag=LU604_15530 NZ_CP089942.1 Protein Homology CDS 2918077 2918367 . - 0 ID=cds-WP_233478706.1;Parent=gene-LU604_RS15530;Dbxref=Genbank:WP_233478706.1;Name=WP_233478706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034494.1;locus_tag=LU604_RS15530;product=hypothetical protein;protein_id=WP_233478706.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2918685 2920931 . - . ID=gene-LU604_RS15535;Name=LU604_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15535;old_locus_tag=LU604_15535 NZ_CP089942.1 Protein Homology CDS 2918685 2920931 . - 0 ID=cds-WP_233478707.1;Parent=gene-LU604_RS15535;Dbxref=Genbank:WP_233478707.1;Name=WP_233478707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282584.1;locus_tag=LU604_RS15535;product=DUF5906 domain-containing protein;protein_id=WP_233478707.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2920935 2921141 . - . ID=gene-LU604_RS15540;Name=LU604_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15540;old_locus_tag=LU604_15540 NZ_CP089942.1 Protein Homology CDS 2920935 2921141 . - 0 ID=cds-WP_233481335.1;Parent=gene-LU604_RS15540;Dbxref=Genbank:WP_233481335.1;Name=WP_233481335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016857265.1;locus_tag=LU604_RS15540;product=Cro/CI family transcriptional regulator;protein_id=WP_233481335.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2921226 2921930 . + . ID=gene-LU604_RS15545;Name=LU604_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15545;old_locus_tag=LU604_15545 NZ_CP089942.1 Protein Homology CDS 2921226 2921930 . + 0 ID=cds-WP_233478709.1;Parent=gene-LU604_RS15545;Dbxref=Genbank:WP_233478709.1;Name=WP_233478709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606440.1;locus_tag=LU604_RS15545;product=helix-turn-helix transcriptional regulator;protein_id=WP_233478709.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2922267 2922410 . + . ID=gene-LU604_RS15550;Name=LU604_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15550;old_locus_tag=LU604_15550 NZ_CP089942.1 Protein Homology CDS 2922267 2922410 . + 0 ID=cds-WP_233478710.1;Parent=gene-LU604_RS15550;Dbxref=Genbank:WP_233478710.1;Name=WP_233478710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233806.1;locus_tag=LU604_RS15550;product=hypothetical protein;protein_id=WP_233478710.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2922537 2922680 . + . ID=gene-LU604_RS15555;Name=LU604_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15555;old_locus_tag=LU604_15555 NZ_CP089942.1 GeneMarkS-2+ CDS 2922537 2922680 . + 0 ID=cds-WP_233478711.1;Parent=gene-LU604_RS15555;Dbxref=Genbank:WP_233478711.1;Name=WP_233478711.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS15555;product=hypothetical protein;protein_id=WP_233478711.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2922689 2923537 . + . ID=gene-LU604_RS15560;Name=LU604_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15560;old_locus_tag=LU604_15560 NZ_CP089942.1 GeneMarkS-2+ CDS 2922689 2923537 . + 0 ID=cds-WP_233478712.1;Parent=gene-LU604_RS15560;Dbxref=Genbank:WP_233478712.1;Name=WP_233478712.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS15560;product=hypothetical protein;protein_id=WP_233478712.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2923541 2924848 . + . ID=gene-LU604_RS15565;Name=LU604_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15565;old_locus_tag=LU604_15565 NZ_CP089942.1 Protein Homology CDS 2923541 2924848 . + 0 ID=cds-WP_233478713.1;Parent=gene-LU604_RS15565;Dbxref=Genbank:WP_233478713.1;Name=WP_233478713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649530.1;locus_tag=LU604_RS15565;product=DUF2800 domain-containing protein;protein_id=WP_233478713.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2924866 2925414 . + . ID=gene-LU604_RS15570;Name=LU604_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15570;old_locus_tag=LU604_15570 NZ_CP089942.1 Protein Homology CDS 2924866 2925414 . + 0 ID=cds-WP_233478714.1;Parent=gene-LU604_RS15570;Dbxref=Genbank:WP_233478714.1;Name=WP_233478714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000769009.1;locus_tag=LU604_RS15570;product=DUF2815 family protein;protein_id=WP_233478714.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2925463 2925837 . + . ID=gene-LU604_RS15575;Name=LU604_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15575;old_locus_tag=LU604_15575 NZ_CP089942.1 Protein Homology CDS 2925463 2925837 . + 0 ID=cds-WP_233478715.1;Parent=gene-LU604_RS15575;Dbxref=Genbank:WP_233478715.1;Name=WP_233478715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649528.1;locus_tag=LU604_RS15575;product=hypothetical protein;protein_id=WP_233478715.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2925916 2926689 . + . ID=gene-LU604_RS15580;Name=LU604_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15580;old_locus_tag=LU604_15580 NZ_CP089942.1 Protein Homology CDS 2925916 2926689 . + 0 ID=cds-WP_233478716.1;Parent=gene-LU604_RS15580;Dbxref=Genbank:WP_233478716.1;Name=WP_233478716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303792.1;locus_tag=LU604_RS15580;product=DUF2303 family protein;protein_id=WP_233478716.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2926746 2926997 . + . ID=gene-LU604_RS15585;Name=LU604_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15585;old_locus_tag=LU604_15585 NZ_CP089942.1 GeneMarkS-2+ CDS 2926746 2926997 . + 0 ID=cds-WP_233481336.1;Parent=gene-LU604_RS15585;Dbxref=Genbank:WP_233481336.1;Name=WP_233481336.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS15585;product=hypothetical protein;protein_id=WP_233481336.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2927053 2927538 . + . ID=gene-LU604_RS15590;Name=LU604_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15590;old_locus_tag=LU604_15590 NZ_CP089942.1 Protein Homology CDS 2927053 2927538 . + 0 ID=cds-WP_233478718.1;Parent=gene-LU604_RS15590;Dbxref=Genbank:WP_233478718.1;Name=WP_233478718.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: protein motif:HMM:NF019106.2;locus_tag=LU604_RS15590;product=NUMOD4 domain-containing protein;protein_id=WP_233478718.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2927523 2929630 . + . ID=gene-LU604_RS15595;Name=LU604_RS15595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15595;old_locus_tag=LU604_15595;pseudo=true NZ_CP089942.1 Protein Homology CDS 2927523 2929630 . + 0 ID=cds-LU604_RS15595;Parent=gene-LU604_RS15595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001683174.1;locus_tag=LU604_RS15595;product=DNA polymerase I;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2929636 2930313 . + . ID=gene-LU604_RS15600;Name=LU604_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15600;old_locus_tag=LU604_15600 NZ_CP089942.1 GeneMarkS-2+ CDS 2929636 2930313 . + 0 ID=cds-WP_233478719.1;Parent=gene-LU604_RS15600;Dbxref=Genbank:WP_233478719.1;Name=WP_233478719.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS15600;product=hypothetical protein;protein_id=WP_233478719.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2930310 2930522 . + . ID=gene-LU604_RS15605;Name=LU604_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15605;old_locus_tag=LU604_15605 NZ_CP089942.1 Protein Homology CDS 2930310 2930522 . + 0 ID=cds-WP_016192969.1;Parent=gene-LU604_RS15605;Dbxref=Genbank:WP_016192969.1;Name=WP_016192969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000873865.1;locus_tag=LU604_RS15605;product=hypothetical protein;protein_id=WP_016192969.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2930538 2930768 . + . ID=gene-LU604_RS15610;Name=LU604_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15610;old_locus_tag=LU604_15610 NZ_CP089942.1 Protein Homology CDS 2930538 2930768 . + 0 ID=cds-WP_016192968.1;Parent=gene-LU604_RS15610;Dbxref=Genbank:WP_016192968.1;Name=WP_016192968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303790.1;locus_tag=LU604_RS15610;product=ANR family transcriptional regulator;protein_id=WP_016192968.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2930752 2931054 . + . ID=gene-LU604_RS15615;Name=LU604_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15615;old_locus_tag=LU604_15615 NZ_CP089942.1 Protein Homology CDS 2930752 2931054 . + 0 ID=cds-WP_016192967.1;Parent=gene-LU604_RS15615;Dbxref=Genbank:WP_016192967.1;Name=WP_016192967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192967.1;locus_tag=LU604_RS15615;product=VRR-NUC domain-containing protein;protein_id=WP_016192967.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2931280 2932587 . + . ID=gene-LU604_RS15620;Name=LU604_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15620;old_locus_tag=LU604_15620 NZ_CP089942.1 Protein Homology CDS 2931280 2932587 . + 0 ID=cds-WP_233480810.1;Parent=gene-LU604_RS15620;Dbxref=Genbank:WP_233480810.1;Name=WP_233480810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120529.1;locus_tag=LU604_RS15620;product=DEAD/DEAH box helicase;protein_id=WP_233480810.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2932584 2932838 . + . ID=gene-LU604_RS15625;Name=LU604_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15625;old_locus_tag=LU604_15625 NZ_CP089942.1 GeneMarkS-2+ CDS 2932584 2932838 . + 0 ID=cds-WP_233478720.1;Parent=gene-LU604_RS15625;Dbxref=Genbank:WP_233478720.1;Name=WP_233478720.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS15625;product=hypothetical protein;protein_id=WP_233478720.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2932841 2933035 . + . ID=gene-LU604_RS15630;Name=LU604_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15630;old_locus_tag=LU604_15630 NZ_CP089942.1 Protein Homology CDS 2932841 2933035 . + 0 ID=cds-WP_233478721.1;Parent=gene-LU604_RS15630;Dbxref=Genbank:WP_233478721.1;Name=WP_233478721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009112577.1;locus_tag=LU604_RS15630;product=AlpA family phage regulatory protein;protein_id=WP_233478721.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2933090 2933166 . - . ID=gene-LU604_RS15635;Name=LU604_RS15635;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS15635;old_locus_tag=LU604_15635 NZ_CP089942.1 tRNAscan-SE tRNA 2933090 2933166 . - . ID=rna-LU604_RS15635;Parent=gene-LU604_RS15635;anticodon=(pos:complement(2933130..2933132));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS15635;product=tRNA-Arg NZ_CP089942.1 tRNAscan-SE exon 2933090 2933166 . - . ID=exon-LU604_RS15635-1;Parent=rna-LU604_RS15635;anticodon=(pos:complement(2933130..2933132));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS15635;product=tRNA-Arg NZ_CP089942.1 RefSeq gene 2933346 2934212 . + . ID=gene-LU604_RS15640;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=LU604_RS15640;old_locus_tag=LU604_15640 NZ_CP089942.1 Protein Homology CDS 2933346 2934212 . + 0 ID=cds-WP_016192214.1;Parent=gene-LU604_RS15640;Dbxref=Genbank:WP_016192214.1;Name=WP_016192214.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492640.1;locus_tag=LU604_RS15640;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_016192214.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2934212 2934424 . + . ID=gene-LU604_RS15645;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=LU604_RS15645;old_locus_tag=LU604_15645 NZ_CP089942.1 Protein Homology CDS 2934212 2934424 . + 0 ID=cds-WP_233478722.1;Parent=gene-LU604_RS15645;Dbxref=Genbank:WP_233478722.1;Name=WP_233478722.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904908.1;locus_tag=LU604_RS15645;product=ribosome-associated protein YbcJ;protein_id=WP_233478722.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2934768 2935537 . - . ID=gene-LU604_RS15650;Name=LU604_RS15650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15650;old_locus_tag=LU604_15650;partial=true;pseudo=true;start_range=.,2934768 NZ_CP089942.1 Protein Homology CDS 2934768 2935537 . - 0 ID=cds-LU604_RS15650;Parent=gene-LU604_RS15650;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS15650;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,2934768;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2936370 2936501 . + . ID=gene-LU604_RS15655;Name=LU604_RS15655;end_range=2936501,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15655;old_locus_tag=LU604_15655;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2936370 2936501 . + 0 ID=cds-LU604_RS15655;Parent=gene-LU604_RS15655;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2936501,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011787828.1;locus_tag=LU604_RS15655;partial=true;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2936631 2936809 . + . ID=gene-LU604_RS15660;Name=LU604_RS15660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15660;old_locus_tag=LU604_15660;pseudo=true NZ_CP089942.1 Protein Homology CDS 2936631 2936809 . + 0 ID=cds-LU604_RS15660;Parent=gene-LU604_RS15660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322936.1;locus_tag=LU604_RS15660;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2936818 2938018 . + . ID=gene-LU604_RS15665;Name=LU604_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15665;old_locus_tag=LU604_15665 NZ_CP089942.1 Protein Homology CDS 2936818 2937645 . + 0 ID=cds-WP_233478723.1-4;Parent=gene-LU604_RS15665;Dbxref=Genbank:WP_233478723.1;Name=WP_233478723.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS15665;product=IS91 family transposase;protein_id=WP_233478723.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 2937647 2938018 . + 0 ID=cds-WP_233478723.1-4;Parent=gene-LU604_RS15665;Dbxref=Genbank:WP_233478723.1;Name=WP_233478723.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS15665;product=IS91 family transposase;protein_id=WP_233478723.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2938191 2939005 . + . ID=gene-LU604_RS15670;Name=LU604_RS15670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15670;old_locus_tag=LU604_15670;partial=true;pseudo=true;start_range=.,2938191 NZ_CP089942.1 Protein Homology CDS 2938191 2939005 . + 0 ID=cds-LU604_RS15670;Parent=gene-LU604_RS15670;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_039289737.1;locus_tag=LU604_RS15670;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,2938191;transl_table=11 NZ_CP089942.1 RefSeq gene 2939173 2940564 . - . ID=gene-LU604_RS15675;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=LU604_RS15675;old_locus_tag=LU604_15675 NZ_CP089942.1 Protein Homology CDS 2939173 2940564 . - 0 ID=cds-WP_016192218.1;Parent=gene-LU604_RS15675;Dbxref=Genbank:WP_016192218.1;Name=WP_016192218.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459532.1;locus_tag=LU604_RS15675;product=cysteine--tRNA ligase;protein_id=WP_016192218.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2940787 2941281 . + . ID=gene-LU604_RS15680;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=LU604_RS15680;old_locus_tag=LU604_15680 NZ_CP089942.1 Protein Homology CDS 2940787 2941281 . + 0 ID=cds-WP_016192219.1;Parent=gene-LU604_RS15680;Dbxref=Genbank:WP_016192219.1;Name=WP_016192219.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459531.1;locus_tag=LU604_RS15680;product=peptidylprolyl isomerase B;protein_id=WP_016192219.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2941281 2942006 . + . ID=gene-LU604_RS15685;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=LU604_RS15685;old_locus_tag=LU604_15685 NZ_CP089942.1 Protein Homology CDS 2941281 2942006 . + 0 ID=cds-WP_233478724.1;Parent=gene-LU604_RS15685;Dbxref=Genbank:WP_233478724.1;Name=WP_233478724.1;Ontology_term=GO:0009245,GO:0008758;gbkey=CDS;gene=lpxH;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192220.1;locus_tag=LU604_RS15685;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_233478724.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2943094 2943603 . + . ID=gene-LU604_RS15690;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=LU604_RS15690;old_locus_tag=LU604_15690 NZ_CP089942.1 Protein Homology CDS 2943094 2943603 . + 0 ID=cds-WP_016192221.1;Parent=gene-LU604_RS15690;Dbxref=Genbank:WP_016192221.1;Name=WP_016192221.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009111975.1;locus_tag=LU604_RS15690;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_016192221.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2943600 2944682 . + . ID=gene-LU604_RS15695;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=LU604_RS15695;old_locus_tag=LU604_15695 NZ_CP089942.1 Protein Homology CDS 2943600 2944682 . + 0 ID=cds-WP_233478725.1;Parent=gene-LU604_RS15695;Dbxref=Genbank:WP_233478725.1;Name=WP_233478725.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192222.1;locus_tag=LU604_RS15695;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_233478725.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2944820 2947237 . - . ID=gene-LU604_RS15700;Name=LU604_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15700;old_locus_tag=LU604_15700 NZ_CP089942.1 Protein Homology CDS 2944820 2947237 . - 0 ID=cds-WP_233478726.1;Parent=gene-LU604_RS15700;Dbxref=Genbank:WP_233478726.1;Name=WP_233478726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192223.1;locus_tag=LU604_RS15700;product=ABC transporter permease;protein_id=WP_233478726.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2947234 2947920 . - . ID=gene-LU604_RS15705;Name=LU604_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15705;old_locus_tag=LU604_15705 NZ_CP089942.1 Protein Homology CDS 2947234 2947920 . - 0 ID=cds-WP_233478727.1;Parent=gene-LU604_RS15705;Dbxref=Genbank:WP_233478727.1;Name=WP_233478727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013508191.1;locus_tag=LU604_RS15705;product=ABC transporter ATP-binding protein;protein_id=WP_233478727.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2947891 2948514 . + . ID=gene-LU604_RS15710;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=LU604_RS15710;old_locus_tag=LU604_15710 NZ_CP089942.1 Protein Homology CDS 2947891 2948514 . + 0 ID=cds-WP_233478728.1;Parent=gene-LU604_RS15710;Dbxref=Genbank:WP_233478728.1;Name=WP_233478728.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192225.1;locus_tag=LU604_RS15710;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_233478728.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2948546 2949343 . + . ID=gene-LU604_RS15715;Name=LU604_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15715;old_locus_tag=LU604_15715 NZ_CP089942.1 Protein Homology CDS 2948546 2949343 . + 0 ID=cds-WP_233478729.1;Parent=gene-LU604_RS15715;Dbxref=Genbank:WP_233478729.1;Name=WP_233478729.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192226.1;locus_tag=LU604_RS15715;product=SDR family oxidoreductase;protein_id=WP_233478729.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2949397 2950254 . + . ID=gene-LU604_RS15720;Name=LU604_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15720;old_locus_tag=LU604_15720 NZ_CP089942.1 Protein Homology CDS 2949397 2950254 . + 0 ID=cds-WP_016192227.1;Parent=gene-LU604_RS15720;Dbxref=Genbank:WP_016192227.1;Name=WP_016192227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106621.1;locus_tag=LU604_RS15720;product=co-chaperone YbbN;protein_id=WP_016192227.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2950371 2951285 . + . ID=gene-LU604_RS15725;Name=LU604_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15725;old_locus_tag=LU604_15725 NZ_CP089942.1 Protein Homology CDS 2950371 2951285 . + 0 ID=cds-WP_016192228.1;Parent=gene-LU604_RS15725;Dbxref=Genbank:WP_016192228.1;Name=WP_016192228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156457.1;locus_tag=LU604_RS15725;product=SPFH domain-containing protein;protein_id=WP_016192228.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2951282 2951731 . + . ID=gene-LU604_RS15730;Name=LU604_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15730;old_locus_tag=LU604_15730 NZ_CP089942.1 Protein Homology CDS 2951282 2951731 . + 0 ID=cds-WP_016192229.1;Parent=gene-LU604_RS15730;Dbxref=Genbank:WP_016192229.1;Name=WP_016192229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156454.1;locus_tag=LU604_RS15730;product=NfeD family protein;protein_id=WP_016192229.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2952459 2952848 . - . ID=gene-LU604_RS15735;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=LU604_RS15735;old_locus_tag=LU604_15735 NZ_CP089942.1 Protein Homology CDS 2952459 2952848 . - 0 ID=cds-WP_016192230.1;Parent=gene-LU604_RS15735;Dbxref=Genbank:WP_016192230.1;Name=WP_016192230.1;Ontology_term=GO:0006355,GO:0006878,GO:0003700;gbkey=CDS;gene=cueR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,cellular copper ion homeostasis|0006878||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749000.1;locus_tag=LU604_RS15735;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_016192230.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2954012 2956525 . + . ID=gene-LU604_RS15740;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=LU604_RS15740;old_locus_tag=LU604_15740 NZ_CP089942.1 Protein Homology CDS 2954012 2956525 . + 0 ID=cds-WP_233478731.1;Parent=gene-LU604_RS15740;Dbxref=Genbank:WP_233478731.1;Name=WP_233478731.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled cation transmembrane transporter activity|0019829||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193059.1;locus_tag=LU604_RS15740;product=copper-exporting P-type ATPase CopA;protein_id=WP_233478731.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2956594 2957394 . + . ID=gene-LU604_RS15745;Name=LU604_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15745;old_locus_tag=LU604_15745 NZ_CP089942.1 Protein Homology CDS 2956594 2957394 . + 0 ID=cds-WP_233478732.1;Parent=gene-LU604_RS15745;Dbxref=Genbank:WP_233478732.1;Name=WP_233478732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193060.1;locus_tag=LU604_RS15745;product=TraB/GumN family protein;protein_id=WP_233478732.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2958059 2958538 . + . ID=gene-LU604_RS15750;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=LU604_RS15750;old_locus_tag=LU604_15750 NZ_CP089942.1 Protein Homology CDS 2958059 2958538 . + 0 ID=cds-WP_233478733.1;Parent=gene-LU604_RS15750;Dbxref=Genbank:WP_233478733.1;Name=WP_233478733.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193061.1;locus_tag=LU604_RS15750;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_233478733.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2958803 2959949 . + . ID=gene-LU604_RS15755;Name=LU604_RS15755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15755;old_locus_tag=LU604_15755;pseudo=true NZ_CP089942.1 Protein Homology CDS 2958803 2959949 . + 0 ID=cds-LU604_RS15755;Parent=gene-LU604_RS15755;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612097.1;locus_tag=LU604_RS15755;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2960052 2961062 . + . ID=gene-LU604_RS15760;Name=LU604_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15760;old_locus_tag=LU604_15760 NZ_CP089942.1 Protein Homology CDS 2960052 2961062 . + 0 ID=cds-WP_233478734.1;Parent=gene-LU604_RS15760;Dbxref=Genbank:WP_233478734.1;Name=WP_233478734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667639.1;locus_tag=LU604_RS15760;product=hypothetical protein;protein_id=WP_233478734.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2961052 2961441 . + . ID=gene-LU604_RS15765;Name=LU604_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15765;old_locus_tag=LU604_15765 NZ_CP089942.1 Protein Homology CDS 2961052 2961441 . + 0 ID=cds-WP_016193066.1;Parent=gene-LU604_RS15765;Dbxref=Genbank:WP_016193066.1;Name=WP_016193066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160474.1;locus_tag=LU604_RS15765;product=hypothetical protein;protein_id=WP_016193066.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2961478 2961672 . - . ID=gene-LU604_RS15770;Name=LU604_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15770;old_locus_tag=LU604_15770 NZ_CP089942.1 Protein Homology CDS 2961478 2961672 . - 0 ID=cds-WP_233480811.1;Parent=gene-LU604_RS15770;Dbxref=Genbank:WP_233480811.1;Name=WP_233480811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193067.1;locus_tag=LU604_RS15770;product=phage antitermination protein;protein_id=WP_233480811.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2961705 2962705 . + . ID=gene-LU604_RS15775;Name=LU604_RS15775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15775;old_locus_tag=LU604_15775;pseudo=true NZ_CP089942.1 Protein Homology CDS 2961705 2962705 . + 0 ID=cds-LU604_RS15775;Parent=gene-LU604_RS15775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192128.1;locus_tag=LU604_RS15775;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2962674 2963114 . + . ID=gene-LU604_RS15780;Name=LU604_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15780;old_locus_tag=LU604_15780 NZ_CP089942.1 Protein Homology CDS 2962674 2963114 . + 0 ID=cds-WP_046372374.1;Parent=gene-LU604_RS15780;Dbxref=Genbank:WP_046372374.1;Name=WP_046372374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160474.1;locus_tag=LU604_RS15780;product=hypothetical protein;protein_id=WP_046372374.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2963374 2964231 . + . ID=gene-LU604_RS15785;Name=LU604_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15785;old_locus_tag=LU604_15785 NZ_CP089942.1 Protein Homology CDS 2963374 2964231 . + 0 ID=cds-WP_233478736.1;Parent=gene-LU604_RS15785;Dbxref=Genbank:WP_233478736.1;Name=WP_233478736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193072.1;locus_tag=LU604_RS15785;product=hypothetical protein;protein_id=WP_233478736.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2964228 2964389 . + . ID=gene-LU604_RS15790;Name=LU604_RS15790;end_range=2964389,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15790;old_locus_tag=LU604_15790;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 2964228 2964389 . + 0 ID=cds-LU604_RS15790;Parent=gene-LU604_RS15790;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2964389,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707455.1;locus_tag=LU604_RS15790;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2964396 2965571 . + . ID=gene-LU604_RS15795;Name=LU604_RS15795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15795;old_locus_tag=LU604_15795;pseudo=true NZ_CP089942.1 Protein Homology CDS 2964396 2965571 . + 0 ID=cds-LU604_RS15795;Parent=gene-LU604_RS15795;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558175.1;locus_tag=LU604_RS15795;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2965738 2966295 . - . ID=gene-LU604_RS15800;Name=LU604_RS15800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15800;old_locus_tag=LU604_15800;partial=true;pseudo=true;start_range=.,2965738 NZ_CP089942.1 Protein Homology CDS 2965738 2966295 . - 0 ID=cds-LU604_RS15800;Parent=gene-LU604_RS15800;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693020.1;locus_tag=LU604_RS15800;partial=true;product=recombinase;pseudo=true;start_range=.,2965738;transl_table=11 NZ_CP089942.1 RefSeq gene 2966510 2966767 . + . ID=gene-LU604_RS15805;Name=LU604_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15805;old_locus_tag=LU604_15805 NZ_CP089942.1 Protein Homology CDS 2966510 2966767 . + 0 ID=cds-WP_016193075.1;Parent=gene-LU604_RS15805;Dbxref=Genbank:WP_016193075.1;Name=WP_016193075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203423.1;locus_tag=LU604_RS15805;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_016193075.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2966790 2967182 . - . ID=gene-LU604_RS15810;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=LU604_RS15810;old_locus_tag=LU604_15810 NZ_CP089942.1 Protein Homology CDS 2966790 2967182 . - 0 ID=cds-WP_233478737.1;Parent=gene-LU604_RS15810;Dbxref=Genbank:WP_233478737.1;Name=WP_233478737.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193076.1;locus_tag=LU604_RS15810;product=holo-ACP synthase;protein_id=WP_233478737.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2967182 2967913 . - . ID=gene-LU604_RS15815;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=LU604_RS15815;old_locus_tag=LU604_15815 NZ_CP089942.1 Protein Homology CDS 2967182 2967913 . - 0 ID=cds-WP_016193077.1;Parent=gene-LU604_RS15815;Dbxref=Genbank:WP_016193077.1;Name=WP_016193077.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192826.1;locus_tag=LU604_RS15815;product=pyridoxine 5'-phosphate synthase;protein_id=WP_016193077.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2967985 2968719 . - . ID=gene-LU604_RS15820;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=LU604_RS15820;old_locus_tag=LU604_15820 NZ_CP089942.1 Protein Homology CDS 2967985 2968719 . - 0 ID=cds-WP_016193078.1;Parent=gene-LU604_RS15820;Dbxref=Genbank:WP_016193078.1;Name=WP_016193078.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803144.1;locus_tag=LU604_RS15820;product=DNA repair protein RecO;protein_id=WP_016193078.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2968724 2969629 . - . ID=gene-LU604_RS15825;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=LU604_RS15825;old_locus_tag=LU604_15825 NZ_CP089942.1 Protein Homology CDS 2968724 2969629 . - 0 ID=cds-WP_233478738.1;Parent=gene-LU604_RS15825;Dbxref=Genbank:WP_233478738.1;Name=WP_233478738.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131214.1;locus_tag=LU604_RS15825;product=GTPase Era;protein_id=WP_233478738.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2969626 2970306 . - . ID=gene-LU604_RS15830;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=LU604_RS15830;old_locus_tag=LU604_15830 NZ_CP089942.1 Protein Homology CDS 2969626 2970306 . - 0 ID=cds-WP_016193080.1;Parent=gene-LU604_RS15830;Dbxref=Genbank:WP_016193080.1;Name=WP_016193080.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=LU604_RS15830;product=ribonuclease III;protein_id=WP_016193080.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2970436 2971398 . - . ID=gene-LU604_RS15835;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=LU604_RS15835;old_locus_tag=LU604_15835 NZ_CP089942.1 Protein Homology CDS 2970436 2971398 . - 0 ID=cds-WP_233478739.1;Parent=gene-LU604_RS15835;Dbxref=Genbank:WP_233478739.1;Name=WP_233478739.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440738.1;locus_tag=LU604_RS15835;product=signal peptidase I;protein_id=WP_233478739.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2971425 2973224 . - . ID=gene-LU604_RS15840;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=LU604_RS15840;old_locus_tag=LU604_15840 NZ_CP089942.1 Protein Homology CDS 2971425 2973224 . - 0 ID=cds-WP_016193082.1;Parent=gene-LU604_RS15840;Dbxref=Genbank:WP_016193082.1;Name=WP_016193082.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311462.1;locus_tag=LU604_RS15840;product=translation elongation factor 4;protein_id=WP_016193082.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2973627 2974637 . - . ID=gene-LU604_RS15845;Name=LU604_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15845;old_locus_tag=LU604_15845 NZ_CP089942.1 Protein Homology CDS 2973627 2974637 . - 0 ID=cds-WP_233478740.1;Parent=gene-LU604_RS15845;Dbxref=Genbank:WP_233478740.1;Name=WP_233478740.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487120.1;locus_tag=LU604_RS15845;product=IS110 family transposase;protein_id=WP_233478740.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2974868 2975564 . - . ID=gene-LU604_RS15850;Name=LU604_RS15850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS15850;old_locus_tag=LU604_15850;pseudo=true NZ_CP089942.1 Protein Homology CDS 2974868 2975564 . - 0 ID=cds-LU604_RS15850;Parent=gene-LU604_RS15850;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=LU604_RS15850;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2975704 2976162 . - . ID=gene-LU604_RS15855;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=LU604_RS15855;old_locus_tag=LU604_15855 NZ_CP089942.1 Protein Homology CDS 2975704 2976162 . - 0 ID=cds-WP_016193085.1;Parent=gene-LU604_RS15855;Dbxref=Genbank:WP_016193085.1;Name=WP_016193085.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803139.1;locus_tag=LU604_RS15855;product=SoxR-reducing system protein RseC;protein_id=WP_016193085.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2976159 2977112 . - . ID=gene-LU604_RS15860;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=LU604_RS15860;old_locus_tag=LU604_15860 NZ_CP089942.1 Protein Homology CDS 2976159 2977112 . - 0 ID=cds-WP_016193086.1;Parent=gene-LU604_RS15860;Dbxref=Genbank:WP_016193086.1;Name=WP_016193086.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159200.1;locus_tag=LU604_RS15860;product=sigma-E factor regulatory protein RseB;protein_id=WP_016193086.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2977112 2977762 . - . ID=gene-LU604_RS15865;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=LU604_RS15865;old_locus_tag=LU604_15865 NZ_CP089942.1 Protein Homology CDS 2977112 2977762 . - 0 ID=cds-WP_233478741.1;Parent=gene-LU604_RS15865;Dbxref=Genbank:WP_233478741.1;Name=WP_233478741.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010257667.1;locus_tag=LU604_RS15865;product=anti-sigma-E factor RseA;protein_id=WP_233478741.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2977793 2978368 . - . ID=gene-LU604_RS15870;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=LU604_RS15870;old_locus_tag=LU604_15870 NZ_CP089942.1 Protein Homology CDS 2977793 2978368 . - 0 ID=cds-WP_016193088.1;Parent=gene-LU604_RS15870;Dbxref=Genbank:WP_016193088.1;Name=WP_016193088.1;Ontology_term=GO:0006352,GO:0006979,GO:0016987,GO:0005737;gbkey=CDS;gene=rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=LU604_RS15870;product=RNA polymerase sigma factor RpoE;protein_id=WP_016193088.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 2978827 2980438 . + . ID=gene-LU604_RS15875;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=pseudogene;locus_tag=LU604_RS15875;old_locus_tag=LU604_15875;pseudo=true NZ_CP089942.1 Protein Homology CDS 2978827 2980438 . + 0 ID=cds-LU604_RS15875;Parent=gene-LU604_RS15875;Note=frameshifted%3B internal stop;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853280.1;locus_tag=LU604_RS15875;product=L-aspartate oxidase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 2980439 2981176 . - . ID=gene-LU604_RS15880;Name=LU604_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15880;old_locus_tag=LU604_15880 NZ_CP089942.1 Protein Homology CDS 2980439 2981176 . - 0 ID=cds-WP_016193092.1;Parent=gene-LU604_RS15880;Dbxref=Genbank:WP_016193092.1;Name=WP_016193092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803134.1;locus_tag=LU604_RS15880;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_016193092.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2981308 2982630 . + . ID=gene-LU604_RS15885;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=LU604_RS15885;old_locus_tag=LU604_15885 NZ_CP089942.1 Protein Homology CDS 2981308 2982630 . + 0 ID=cds-WP_016193093.1;Parent=gene-LU604_RS15885;Dbxref=Genbank:WP_016193093.1;Name=WP_016193093.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159206.1;locus_tag=LU604_RS15885;product=ATP-dependent RNA helicase SrmB;protein_id=WP_016193093.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2982759 2983880 . - . ID=gene-LU604_RS15890;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=LU604_RS15890;old_locus_tag=LU604_15890 NZ_CP089942.1 Protein Homology CDS 2982759 2983880 . - 0 ID=cds-WP_016193094.1;Parent=gene-LU604_RS15890;Dbxref=Genbank:WP_016193094.1;Name=WP_016193094.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311490.1;locus_tag=LU604_RS15890;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_016193094.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2983883 2984962 . - . ID=gene-LU604_RS15895;Name=LU604_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15895;old_locus_tag=LU604_15895 NZ_CP089942.1 Protein Homology CDS 2983883 2984962 . - 0 ID=cds-WP_233480812.1;Parent=gene-LU604_RS15895;Dbxref=Genbank:WP_233480812.1;Name=WP_233480812.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172124.1;locus_tag=LU604_RS15895;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_233480812.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2985635 2985919 . + . ID=gene-LU604_RS15900;Name=LU604_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15900;old_locus_tag=LU604_15900 NZ_CP089942.1 GeneMarkS-2+ CDS 2985635 2985919 . + 0 ID=cds-WP_016193096.1;Parent=gene-LU604_RS15900;Dbxref=Genbank:WP_016193096.1;Name=WP_016193096.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS15900;product=hypothetical protein;protein_id=WP_016193096.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2986285 2989491 . + . ID=gene-LU604_RS15905;Name=LU604_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15905;old_locus_tag=LU604_15905 NZ_CP089942.1 Protein Homology CDS 2986285 2989491 . + 0 ID=cds-WP_233478743.1;Parent=gene-LU604_RS15905;Dbxref=Genbank:WP_233478743.1;Name=WP_233478743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193097.1;locus_tag=LU604_RS15905;product=M66 family metalloprotease;protein_id=WP_233478743.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2990092 2990607 . + . ID=gene-LU604_RS15910;Name=LU604_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15910;old_locus_tag=LU604_15910 NZ_CP089942.1 Protein Homology CDS 2990092 2990607 . + 0 ID=cds-WP_233478744.1;Parent=gene-LU604_RS15910;Dbxref=Genbank:WP_233478744.1;Name=WP_233478744.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025478.2;locus_tag=LU604_RS15910;product=T6SS effector amidase Tae4 family protein;protein_id=WP_233478744.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2991345 2993018 . - . ID=gene-LU604_RS15915;Name=LU604_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15915;old_locus_tag=LU604_15915 NZ_CP089942.1 Protein Homology CDS 2991345 2993018 . - 0 ID=cds-WP_233478745.1;Parent=gene-LU604_RS15915;Dbxref=Genbank:WP_233478745.1;Name=WP_233478745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413918.1;locus_tag=LU604_RS15915;product=hypothetical protein;protein_id=WP_233478745.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2993015 2993557 . - . ID=gene-LU604_RS15920;Name=LU604_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15920;old_locus_tag=LU604_15920 NZ_CP089942.1 Protein Homology CDS 2993015 2993557 . - 0 ID=cds-WP_233478746.1;Parent=gene-LU604_RS15920;Dbxref=Genbank:WP_233478746.1;Name=WP_233478746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303705.1;locus_tag=LU604_RS15920;product=hypothetical protein;protein_id=WP_233478746.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2993554 2994258 . - . ID=gene-LU604_RS15925;Name=LU604_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15925;old_locus_tag=LU604_15925 NZ_CP089942.1 GeneMarkS-2+ CDS 2993554 2994258 . - 0 ID=cds-WP_233478747.1;Parent=gene-LU604_RS15925;Dbxref=Genbank:WP_233478747.1;Name=WP_233478747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS15925;product=hypothetical protein;protein_id=WP_233478747.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2994255 2995733 . - . ID=gene-LU604_RS15930;Name=LU604_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15930;old_locus_tag=LU604_15930 NZ_CP089942.1 Protein Homology CDS 2994255 2995733 . - 0 ID=cds-WP_233478748.1;Parent=gene-LU604_RS15930;Dbxref=Genbank:WP_233478748.1;Name=WP_233478748.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023985.2;locus_tag=LU604_RS15930;product=phage tail protein;protein_id=WP_233478748.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2995736 2996275 . - . ID=gene-LU604_RS15935;Name=LU604_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15935;old_locus_tag=LU604_15935 NZ_CP089942.1 Protein Homology CDS 2995736 2996275 . - 0 ID=cds-WP_233478749.1;Parent=gene-LU604_RS15935;Dbxref=Genbank:WP_233478749.1;Name=WP_233478749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392857.1;locus_tag=LU604_RS15935;product=phage tail protein;protein_id=WP_233478749.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2996268 2997455 . - . ID=gene-LU604_RS15940;Name=LU604_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15940;old_locus_tag=LU604_15940 NZ_CP089942.1 Protein Homology CDS 2996268 2997455 . - 0 ID=cds-WP_233478750.1;Parent=gene-LU604_RS15940;Dbxref=Genbank:WP_233478750.1;Name=WP_233478750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606950.1;locus_tag=LU604_RS15940;product=baseplate J/gp47 family protein;protein_id=WP_233478750.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2997480 2997806 . - . ID=gene-LU604_RS15945;Name=LU604_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15945;old_locus_tag=LU604_15945 NZ_CP089942.1 Protein Homology CDS 2997480 2997806 . - 0 ID=cds-WP_233478751.1;Parent=gene-LU604_RS15945;Dbxref=Genbank:WP_233478751.1;Name=WP_233478751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192946.1;locus_tag=LU604_RS15945;product=DUF2590 family protein;protein_id=WP_233478751.1;transl_table=11 NZ_CP089942.1 RefSeq gene 2997803 2999890 . - . ID=gene-LU604_RS15950;Name=LU604_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15950;old_locus_tag=LU604_15950 NZ_CP089942.1 Protein Homology CDS 2997803 2999890 . - 0 ID=cds-WP_233478752.1;Parent=gene-LU604_RS15950;Dbxref=Genbank:WP_233478752.1;Name=WP_233478752.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413913.1;locus_tag=LU604_RS15950;product=phage tail tape measure protein;protein_id=WP_233478752.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3000099 3000371 . - . ID=gene-LU604_RS15955;Name=LU604_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15955;old_locus_tag=LU604_15955 NZ_CP089942.1 Protein Homology CDS 3000099 3000371 . - 0 ID=cds-WP_233478753.1;Parent=gene-LU604_RS15955;Dbxref=Genbank:WP_233478753.1;Name=WP_233478753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815676.1;locus_tag=LU604_RS15955;product=putative phage tail assembly chaperone;protein_id=WP_233478753.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3000474 3000851 . - . ID=gene-LU604_RS15960;Name=LU604_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15960;old_locus_tag=LU604_15960 NZ_CP089942.1 Protein Homology CDS 3000474 3000851 . - 0 ID=cds-WP_233478754.1;Parent=gene-LU604_RS15960;Dbxref=Genbank:WP_233478754.1;Name=WP_233478754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000811077.1;locus_tag=LU604_RS15960;product=hypothetical protein;protein_id=WP_233478754.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3000851 3001189 . - . ID=gene-LU604_RS15965;Name=LU604_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15965;old_locus_tag=LU604_15965 NZ_CP089942.1 Protein Homology CDS 3000851 3001189 . - 0 ID=cds-WP_233478755.1;Parent=gene-LU604_RS15965;Dbxref=Genbank:WP_233478755.1;Name=WP_233478755.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007710822.1;locus_tag=LU604_RS15965;product=M15 family metallopeptidase;protein_id=WP_233478755.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3001194 3001478 . - . ID=gene-LU604_RS15970;Name=LU604_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15970;old_locus_tag=LU604_15970 NZ_CP089942.1 Protein Homology CDS 3001194 3001478 . - 0 ID=cds-WP_233478756.1;Parent=gene-LU604_RS15970;Dbxref=Genbank:WP_233478756.1;Name=WP_233478756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413909.1;locus_tag=LU604_RS15970;product=phage holin family protein;protein_id=WP_233478756.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3001483 3001938 . - . ID=gene-LU604_RS15975;Name=LU604_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15975;old_locus_tag=LU604_15975 NZ_CP089942.1 Protein Homology CDS 3001483 3001938 . - 0 ID=cds-WP_233478757.1;Parent=gene-LU604_RS15975;Dbxref=Genbank:WP_233478757.1;Name=WP_233478757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192940.1;locus_tag=LU604_RS15975;product=DUF2597 family protein;protein_id=WP_233478757.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3001935 3003080 . - . ID=gene-LU604_RS15980;Name=LU604_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15980;old_locus_tag=LU604_15980 NZ_CP089942.1 Protein Homology CDS 3001935 3003080 . - 0 ID=cds-WP_233481337.1;Parent=gene-LU604_RS15980;Dbxref=Genbank:WP_233481337.1;Name=WP_233481337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192939.1;locus_tag=LU604_RS15980;product=DUF2586 domain-containing protein;protein_id=WP_233481337.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3003080 3003772 . - . ID=gene-LU604_RS15985;Name=LU604_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15985;old_locus_tag=LU604_15985 NZ_CP089942.1 Protein Homology CDS 3003080 3003772 . - 0 ID=cds-WP_233478759.1;Parent=gene-LU604_RS15985;Dbxref=Genbank:WP_233478759.1;Name=WP_233478759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815670.1;locus_tag=LU604_RS15985;product=hypothetical protein;protein_id=WP_233478759.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3003769 3004275 . - . ID=gene-LU604_RS15990;Name=LU604_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15990;old_locus_tag=LU604_15990 NZ_CP089942.1 Protein Homology CDS 3003769 3004275 . - 0 ID=cds-WP_233478760.1;Parent=gene-LU604_RS15990;Dbxref=Genbank:WP_233478760.1;Name=WP_233478760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303714.1;locus_tag=LU604_RS15990;product=phage tail protein;protein_id=WP_233478760.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3004272 3004724 . - . ID=gene-LU604_RS15995;Name=LU604_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS15995;old_locus_tag=LU604_15995 NZ_CP089942.1 Protein Homology CDS 3004272 3004724 . - 0 ID=cds-WP_233478761.1;Parent=gene-LU604_RS15995;Dbxref=Genbank:WP_233478761.1;Name=WP_233478761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303715.1;locus_tag=LU604_RS15995;product=head completion/stabilization protein;protein_id=WP_233478761.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3004841 3005584 . - . ID=gene-LU604_RS16000;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=LU604_RS16000;old_locus_tag=LU604_16000 NZ_CP089942.1 Protein Homology CDS 3004841 3005584 . - 0 ID=cds-WP_233481338.1;Parent=gene-LU604_RS16000;Dbxref=Genbank:WP_233481338.1;Name=WP_233481338.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303716.1;locus_tag=LU604_RS16000;product=phage terminase small subunit;protein_id=WP_233481338.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3005599 3006762 . - . ID=gene-LU604_RS16005;Name=LU604_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16005;old_locus_tag=LU604_16005 NZ_CP089942.1 Protein Homology CDS 3005599 3006762 . - 0 ID=cds-WP_233478762.1;Parent=gene-LU604_RS16005;Dbxref=Genbank:WP_233478762.1;Name=WP_233478762.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815666.1;locus_tag=LU604_RS16005;product=phage major capsid protein%2C P2 family;protein_id=WP_233478762.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3006842 3007792 . - . ID=gene-LU604_RS16010;Name=LU604_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16010;old_locus_tag=LU604_16010 NZ_CP089942.1 Protein Homology CDS 3006842 3007792 . - 0 ID=cds-WP_233478763.1;Parent=gene-LU604_RS16010;Dbxref=Genbank:WP_233478763.1;Name=WP_233478763.1;Ontology_term=GO:0019069;gbkey=CDS;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413904.1;locus_tag=LU604_RS16010;product=GPO family capsid scaffolding protein;protein_id=WP_233478763.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3007954 3009984 . + . ID=gene-LU604_RS16015;Name=LU604_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16015;old_locus_tag=LU604_16015 NZ_CP089942.1 Protein Homology CDS 3007954 3009984 . + 0 ID=cds-WP_233478764.1;Parent=gene-LU604_RS16015;Dbxref=Genbank:WP_233478764.1;Name=WP_233478764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303719.1;locus_tag=LU604_RS16015;product=terminase family protein;protein_id=WP_233478764.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3009905 3010903 . + . ID=gene-LU604_RS16020;Name=LU604_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16020;old_locus_tag=LU604_16020 NZ_CP089942.1 Protein Homology CDS 3009905 3010903 . + 0 ID=cds-WP_233480813.1;Parent=gene-LU604_RS16020;Dbxref=Genbank:WP_233480813.1;Name=WP_233480813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815663.1;locus_tag=LU604_RS16020;product=phage portal protein;protein_id=WP_233480813.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3010966 3011232 . + . ID=gene-LU604_RS16025;Name=LU604_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16025;old_locus_tag=LU604_16025 NZ_CP089942.1 Protein Homology CDS 3010966 3011232 . + 0 ID=cds-WP_233478765.1;Parent=gene-LU604_RS16025;Dbxref=Genbank:WP_233478765.1;Name=WP_233478765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815662.1;locus_tag=LU604_RS16025;product=ogr/Delta-like zinc finger family protein;protein_id=WP_233478765.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3011269 3011646 . - . ID=gene-LU604_RS16030;Name=LU604_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16030;old_locus_tag=LU604_16030 NZ_CP089942.1 Protein Homology CDS 3011269 3011646 . - 0 ID=cds-WP_233478766.1;Parent=gene-LU604_RS16030;Dbxref=Genbank:WP_233478766.1;Name=WP_233478766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000157344.1;locus_tag=LU604_RS16030;product=type II toxin-antitoxin system YafO family toxin;protein_id=WP_233478766.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3011647 3012255 . - . ID=gene-LU604_RS16035;Name=LU604_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16035;old_locus_tag=LU604_16035 NZ_CP089942.1 GeneMarkS-2+ CDS 3011647 3012255 . - 0 ID=cds-WP_233478767.1;Parent=gene-LU604_RS16035;Dbxref=Genbank:WP_233478767.1;Name=WP_233478767.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16035;product=hypothetical protein;protein_id=WP_233478767.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3012325 3012561 . - . ID=gene-LU604_RS16040;Name=LU604_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16040;old_locus_tag=LU604_16040 NZ_CP089942.1 GeneMarkS-2+ CDS 3012325 3012561 . - 0 ID=cds-WP_233478768.1;Parent=gene-LU604_RS16040;Dbxref=Genbank:WP_233478768.1;Name=WP_233478768.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16040;product=hypothetical protein;protein_id=WP_233478768.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3012838 3015474 . - . ID=gene-LU604_RS16045;Name=LU604_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16045;old_locus_tag=LU604_16045 NZ_CP089942.1 Protein Homology CDS 3012838 3015474 . - 0 ID=cds-WP_233478769.1;Parent=gene-LU604_RS16045;Dbxref=Genbank:WP_233478769.1;Name=WP_233478769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072486.1;locus_tag=LU604_RS16045;product=replication endonuclease;protein_id=WP_233478769.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3015467 3016525 . - . ID=gene-LU604_RS16050;Name=LU604_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16050;old_locus_tag=LU604_16050 NZ_CP089942.1 Protein Homology CDS 3015467 3016525 . - 0 ID=cds-WP_233478770.1;Parent=gene-LU604_RS16050;Dbxref=Genbank:WP_233478770.1;Name=WP_233478770.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003835837.1;locus_tag=LU604_RS16050;product=DNA cytosine methyltransferase;protein_id=WP_233478770.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3016536 3017501 . - . ID=gene-LU604_RS16055;Name=LU604_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16055;old_locus_tag=LU604_16055 NZ_CP089942.1 Protein Homology CDS 3016536 3017501 . - 0 ID=cds-WP_233478771.1;Parent=gene-LU604_RS16055;Dbxref=Genbank:WP_233478771.1;Name=WP_233478771.1;Ontology_term=GO:0006306,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500360.1;locus_tag=LU604_RS16055;product=Dam family site-specific DNA-(adenine-N6)-methyltransferase;protein_id=WP_233478771.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3017498 3018226 . - . ID=gene-LU604_RS16060;Name=LU604_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16060;old_locus_tag=LU604_16060 NZ_CP089942.1 GeneMarkS-2+ CDS 3017498 3018226 . - 0 ID=cds-WP_233478772.1;Parent=gene-LU604_RS16060;Dbxref=Genbank:WP_233478772.1;Name=WP_233478772.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16060;product=hypothetical protein;protein_id=WP_233478772.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3018297 3018596 . - . ID=gene-LU604_RS16065;Name=LU604_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16065;old_locus_tag=LU604_16065 NZ_CP089942.1 Protein Homology CDS 3018297 3018596 . - 0 ID=cds-WP_233478773.1;Parent=gene-LU604_RS16065;Dbxref=Genbank:WP_233478773.1;Name=WP_233478773.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036302.2;locus_tag=LU604_RS16065;product=DUF5347 family protein;protein_id=WP_233478773.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3018605 3018820 . - . ID=gene-LU604_RS16070;Name=LU604_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16070;old_locus_tag=LU604_16070 NZ_CP089942.1 Protein Homology CDS 3018605 3018820 . - 0 ID=cds-WP_233478774.1;Parent=gene-LU604_RS16070;Dbxref=Genbank:WP_233478774.1;Name=WP_233478774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656632.1;locus_tag=LU604_RS16070;product=DUF2724 domain-containing protein;protein_id=WP_233478774.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3019028 3019231 . - . ID=gene-LU604_RS16075;Name=LU604_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16075;old_locus_tag=LU604_16075 NZ_CP089942.1 GeneMarkS-2+ CDS 3019028 3019231 . - 0 ID=cds-WP_233478775.1;Parent=gene-LU604_RS16075;Dbxref=Genbank:WP_233478775.1;Name=WP_233478775.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16075;product=hypothetical protein;protein_id=WP_233478775.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3019240 3019584 . - . ID=gene-LU604_RS16080;Name=LU604_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16080;old_locus_tag=LU604_16080 NZ_CP089942.1 Protein Homology CDS 3019240 3019584 . - 0 ID=cds-WP_233481339.1;Parent=gene-LU604_RS16080;Dbxref=Genbank:WP_233481339.1;Name=WP_233481339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001353011.1;locus_tag=LU604_RS16080;product=Cox family DNA-binding protein;protein_id=WP_233481339.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3019663 3019965 . + . ID=gene-LU604_RS16085;Name=LU604_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16085;old_locus_tag=LU604_16085 NZ_CP089942.1 Protein Homology CDS 3019663 3019965 . + 0 ID=cds-WP_233480814.1;Parent=gene-LU604_RS16085;Dbxref=Genbank:WP_233480814.1;Name=WP_233480814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000599713.1;locus_tag=LU604_RS16085;product=helix-turn-helix transcriptional regulator;protein_id=WP_233480814.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3020032 3021041 . + . ID=gene-LU604_RS16090;Name=LU604_RS16090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16090;old_locus_tag=LU604_16090;pseudo=true NZ_CP089942.1 Protein Homology CDS 3020032 3021041 . + 0 ID=cds-LU604_RS16090;Parent=gene-LU604_RS16090;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201484.1;locus_tag=LU604_RS16090;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3021183 3021533 . - . ID=gene-LU604_RS16095;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=LU604_RS16095;old_locus_tag=LU604_16095 NZ_CP089942.1 Protein Homology CDS 3021183 3021533 . - 0 ID=cds-WP_016193098.1;Parent=gene-LU604_RS16095;Dbxref=Genbank:WP_016193098.1;Name=WP_016193098.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193098.1;locus_tag=LU604_RS16095;product=50S ribosomal protein L19;protein_id=WP_016193098.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3021590 3022348 . - . ID=gene-LU604_RS16100;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=LU604_RS16100;old_locus_tag=LU604_16100 NZ_CP089942.1 Protein Homology CDS 3021590 3022348 . - 0 ID=cds-WP_233480815.1;Parent=gene-LU604_RS16100;Dbxref=Genbank:WP_233480815.1;Name=WP_233480815.1;Ontology_term=GO:0006400,GO:0009019;gbkey=CDS;gene=trmD;go_function=tRNA (guanine-N1-)-methyltransferase activity|0009019||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193099.1;locus_tag=LU604_RS16100;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_233480815.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3022384 3022932 . - . ID=gene-LU604_RS16105;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=LU604_RS16105;old_locus_tag=LU604_16105 NZ_CP089942.1 Protein Homology CDS 3022384 3022932 . - 0 ID=cds-WP_233478777.1;Parent=gene-LU604_RS16105;Dbxref=Genbank:WP_233478777.1;Name=WP_233478777.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=LU604_RS16105;product=ribosome maturation factor RimM;protein_id=WP_233478777.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3022951 3023199 . - . ID=gene-LU604_RS16110;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=LU604_RS16110;old_locus_tag=LU604_16110 NZ_CP089942.1 Protein Homology CDS 3022951 3023199 . - 0 ID=cds-WP_016193101.1;Parent=gene-LU604_RS16110;Dbxref=Genbank:WP_016193101.1;Name=WP_016193101.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=LU604_RS16110;product=30S ribosomal protein S16;protein_id=WP_016193101.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3023336 3024697 . - . ID=gene-LU604_RS16115;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=LU604_RS16115;old_locus_tag=LU604_16115 NZ_CP089942.1 Protein Homology CDS 3023336 3024697 . - 0 ID=cds-WP_016193102.1;Parent=gene-LU604_RS16115;Dbxref=Genbank:WP_016193102.1;Name=WP_016193102.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=LU604_RS16115;product=signal recognition particle protein;protein_id=WP_016193102.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3024857 3025648 . + . ID=gene-LU604_RS16120;Name=LU604_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16120;old_locus_tag=LU604_16120 NZ_CP089942.1 Protein Homology CDS 3024857 3025648 . + 0 ID=cds-WP_016193103.1;Parent=gene-LU604_RS16120;Dbxref=Genbank:WP_016193103.1;Name=WP_016193103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193103.1;locus_tag=LU604_RS16120;product=inner membrane protein YpjD;protein_id=WP_016193103.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3025674 3026960 . + . ID=gene-LU604_RS16125;Name=LU604_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16125;old_locus_tag=LU604_16125 NZ_CP089942.1 Protein Homology CDS 3025674 3026960 . + 0 ID=cds-WP_040465921.1;Parent=gene-LU604_RS16125;Dbxref=Genbank:WP_040465921.1;Name=WP_040465921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168799.1;locus_tag=LU604_RS16125;product=HlyC/CorC family transporter;protein_id=WP_040465921.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3027019 3027534 . - . ID=gene-LU604_RS16130;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=LU604_RS16130;old_locus_tag=LU604_16130 NZ_CP089942.1 Protein Homology CDS 3027019 3027534 . - 0 ID=cds-WP_233478778.1;Parent=gene-LU604_RS16130;Dbxref=Genbank:WP_233478778.1;Name=WP_233478778.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=LU604_RS16130;product=S-ribosylhomocysteine lyase;protein_id=WP_233478778.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3027685 3029250 . - . ID=gene-LU604_RS16135;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=LU604_RS16135;old_locus_tag=LU604_16135 NZ_CP089942.1 Protein Homology CDS 3027685 3029250 . - 0 ID=cds-WP_233478779.1;Parent=gene-LU604_RS16135;Dbxref=Genbank:WP_233478779.1;Name=WP_233478779.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168798.1;locus_tag=LU604_RS16135;product=glutamate--cysteine ligase;protein_id=WP_233478779.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3029332 3029742 . - . ID=gene-LU604_RS16140;Name=LU604_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16140;old_locus_tag=LU604_16140 NZ_CP089942.1 Protein Homology CDS 3029332 3029742 . - 0 ID=cds-WP_233478780.1;Parent=gene-LU604_RS16140;Dbxref=Genbank:WP_233478780.1;Name=WP_233478780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594419.1;locus_tag=LU604_RS16140;product=DedA family protein;protein_id=WP_233478780.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3029739 3030305 . - . ID=gene-LU604_RS16145;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=LU604_RS16145;old_locus_tag=LU604_16145 NZ_CP089942.1 Protein Homology CDS 3029739 3030305 . - 0 ID=cds-WP_016193108.1;Parent=gene-LU604_RS16145;Dbxref=Genbank:WP_016193108.1;Name=WP_016193108.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278443.1;locus_tag=LU604_RS16145;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_016193108.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3030559 3030635 . - . ID=gene-LU604_RS16150;Name=LU604_RS16150;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS16150;old_locus_tag=LU604_16150 NZ_CP089942.1 tRNAscan-SE tRNA 3030559 3030635 . - . ID=rna-LU604_RS16150;Parent=gene-LU604_RS16150;anticodon=(pos:complement(3030599..3030601));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS16150;product=tRNA-Arg NZ_CP089942.1 tRNAscan-SE exon 3030559 3030635 . - . ID=exon-LU604_RS16150-1;Parent=rna-LU604_RS16150;anticodon=(pos:complement(3030599..3030601));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS16150;product=tRNA-Arg NZ_CP089942.1 RefSeq gene 3030742 3030818 . - . ID=gene-LU604_RS16155;Name=LU604_RS16155;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS16155;old_locus_tag=LU604_16155 NZ_CP089942.1 tRNAscan-SE tRNA 3030742 3030818 . - . ID=rna-LU604_RS16155;Parent=gene-LU604_RS16155;anticodon=(pos:complement(3030782..3030784));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS16155;product=tRNA-Arg NZ_CP089942.1 tRNAscan-SE exon 3030742 3030818 . - . ID=exon-LU604_RS16155-1;Parent=rna-LU604_RS16155;anticodon=(pos:complement(3030782..3030784));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS16155;product=tRNA-Arg NZ_CP089942.1 RefSeq gene 3030822 3030914 . - . ID=gene-LU604_RS16160;Name=LU604_RS16160;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS16160;old_locus_tag=LU604_16160 NZ_CP089942.1 tRNAscan-SE tRNA 3030822 3030914 . - . ID=rna-LU604_RS16160;Parent=gene-LU604_RS16160;anticodon=(pos:complement(3030878..3030880));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS16160;product=tRNA-Ser NZ_CP089942.1 tRNAscan-SE exon 3030822 3030914 . - . ID=exon-LU604_RS16160-1;Parent=rna-LU604_RS16160;anticodon=(pos:complement(3030878..3030880));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS16160;product=tRNA-Ser NZ_CP089942.1 RefSeq gene 3031221 3031406 . - . ID=gene-LU604_RS16165;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=LU604_RS16165;old_locus_tag=LU604_16165 NZ_CP089942.1 Protein Homology CDS 3031221 3031406 . - 0 ID=cds-WP_016193109.1;Parent=gene-LU604_RS16165;Dbxref=Genbank:WP_016193109.1;Name=WP_016193109.1;Ontology_term=GO:0006109,GO:0006402,GO:0003723;gbkey=CDS;gene=csrA;go_function=RNA binding|0003723||IEA;go_process=regulation of carbohydrate metabolic process|0006109||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155916.1;locus_tag=LU604_RS16165;product=carbon storage regulator CsrA;protein_id=WP_016193109.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3031656 3034283 . - . ID=gene-LU604_RS16170;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=LU604_RS16170;old_locus_tag=LU604_16170 NZ_CP089942.1 Protein Homology CDS 3031656 3034283 . - 0 ID=cds-WP_233478781.1;Parent=gene-LU604_RS16170;Dbxref=Genbank:WP_233478781.1;Name=WP_233478781.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228400.1;locus_tag=LU604_RS16170;product=alanine--tRNA ligase;protein_id=WP_233478781.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3034422 3034928 . - . ID=gene-LU604_RS16175;Name=LU604_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16175;old_locus_tag=LU604_16175 NZ_CP089942.1 Protein Homology CDS 3034422 3034928 . - 0 ID=cds-WP_016193111.1;Parent=gene-LU604_RS16175;Dbxref=Genbank:WP_016193111.1;Name=WP_016193111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669035.1;locus_tag=LU604_RS16175;product=regulatory protein RecX;protein_id=WP_016193111.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3035064 3036131 . - . ID=gene-LU604_RS16180;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=LU604_RS16180;old_locus_tag=LU604_16180 NZ_CP089942.1 Protein Homology CDS 3035064 3036131 . - 0 ID=cds-WP_016193112.1;Parent=gene-LU604_RS16180;Dbxref=Genbank:WP_016193112.1;Name=WP_016193112.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444432.1;locus_tag=LU604_RS16180;product=recombinase RecA;protein_id=WP_016193112.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3036227 3036721 . - . ID=gene-LU604_RS16185;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=LU604_RS16185;old_locus_tag=LU604_16185 NZ_CP089942.1 Protein Homology CDS 3036227 3036721 . - 0 ID=cds-WP_016193113.1;Parent=gene-LU604_RS16185;Dbxref=Genbank:WP_016193113.1;Name=WP_016193113.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007370557.1;locus_tag=LU604_RS16185;product=nicotinamide-nucleotide amidase;protein_id=WP_016193113.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3037392 3038471 . - . ID=gene-LU604_RS16190;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=LU604_RS16190;old_locus_tag=LU604_16190 NZ_CP089942.1 Protein Homology CDS 3037392 3038471 . - 0 ID=cds-WP_233478782.1;Parent=gene-LU604_RS16190;Dbxref=Genbank:WP_233478782.1;Name=WP_233478782.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193114.1;locus_tag=LU604_RS16190;product=lytic murein transglycosylase B;protein_id=WP_233478782.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3038681 3039271 . + . ID=gene-LU604_RS16195;Name=LU604_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16195;old_locus_tag=LU604_16195 NZ_CP089942.1 Protein Homology CDS 3038681 3039271 . + 0 ID=cds-WP_233480816.1;Parent=gene-LU604_RS16195;Dbxref=Genbank:WP_233480816.1;Name=WP_233480816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193115.1;locus_tag=LU604_RS16195;product=DJ-1/PfpI family protein;protein_id=WP_233480816.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3039441 3040649 . + . ID=gene-LU604_RS16200;Name=LU604_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16200;old_locus_tag=LU604_16200 NZ_CP089942.1 Protein Homology CDS 3039441 3040649 . + 0 ID=cds-WP_233481340.1;Parent=gene-LU604_RS16200;Dbxref=Genbank:WP_233481340.1;Name=WP_233481340.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS16200;product=IS256 family transposase;protein_id=WP_233481340.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3040661 3041894 . - . ID=gene-LU604_RS16205;Name=LU604_RS16205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16205;old_locus_tag=LU604_16205;pseudo=true NZ_CP089942.1 Protein Homology CDS 3040661 3041894 . - 0 ID=cds-LU604_RS16205;Parent=gene-LU604_RS16205;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025244073.1;locus_tag=LU604_RS16205;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3042118 3043158 . + . ID=gene-LU604_RS16210;Name=LU604_RS16210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16210;old_locus_tag=LU604_16210;pseudo=true NZ_CP089942.1 Protein Homology CDS 3042118 3043158 . + 0 ID=cds-LU604_RS16210;Parent=gene-LU604_RS16210;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS16210;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3043302 3043625 . - . ID=gene-LU604_RS16215;Name=LU604_RS16215;end_range=3043625,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16215;old_locus_tag=LU604_16215;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3043302 3043625 . - 0 ID=cds-LU604_RS16215;Parent=gene-LU604_RS16215;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;end_range=3043625,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000544830.1;locus_tag=LU604_RS16215;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3043613 3044380 . - . ID=gene-LU604_RS16220;Name=LU604_RS16220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16220;old_locus_tag=LU604_16220;pseudo=true NZ_CP089942.1 Protein Homology CDS 3043613 3044380 . - 0 ID=cds-LU604_RS16220;Parent=gene-LU604_RS16220;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595405.1;locus_tag=LU604_RS16220;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3044493 3044654 . - . ID=gene-LU604_RS16225;Name=LU604_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16225;old_locus_tag=LU604_16225 NZ_CP089942.1 GeneMarkS-2+ CDS 3044493 3044654 . - 0 ID=cds-WP_233478784.1;Parent=gene-LU604_RS16225;Dbxref=Genbank:WP_233478784.1;Name=WP_233478784.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16225;product=hypothetical protein;protein_id=WP_233478784.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3044812 3045234 . - . ID=gene-LU604_RS16230;Name=LU604_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16230;old_locus_tag=LU604_16230 NZ_CP089942.1 Protein Homology CDS 3044812 3045234 . - 0 ID=cds-WP_016191996.1;Parent=gene-LU604_RS16230;Dbxref=Genbank:WP_016191996.1;Name=WP_016191996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120399.1;locus_tag=LU604_RS16230;product=hypothetical protein;protein_id=WP_016191996.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3045320 3046096 . - . ID=gene-LU604_RS16235;Name=LU604_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16235;old_locus_tag=LU604_16235 NZ_CP089942.1 Protein Homology CDS 3045320 3046096 . - 0 ID=cds-WP_016191995.1;Parent=gene-LU604_RS16235;Dbxref=Genbank:WP_016191995.1;Name=WP_016191995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120401.1;locus_tag=LU604_RS16235;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_016191995.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3046099 3046617 . - . ID=gene-LU604_RS16240;Name=LU604_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16240;old_locus_tag=LU604_16240 NZ_CP089942.1 Protein Homology CDS 3046099 3046617 . - 0 ID=cds-WP_233480817.1;Parent=gene-LU604_RS16240;Dbxref=Genbank:WP_233480817.1;Name=WP_233480817.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014675.2;locus_tag=LU604_RS16240;product=family 10 glycosylhydrolase;protein_id=WP_233480817.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3046707 3046772 . - . ID=gene-LU604_RS16245;Name=LU604_RS16245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16245;old_locus_tag=LU604_16245;partial=true;pseudo=true;start_range=.,3046707 NZ_CP089942.1 Protein Homology CDS 3046707 3046772 . - 0 ID=cds-LU604_RS16245;Parent=gene-LU604_RS16245;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014675.2;locus_tag=LU604_RS16245;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3046707;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3046874 3047272 . - . ID=gene-LU604_RS16250;Name=LU604_RS16250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16250;old_locus_tag=LU604_16250;partial=true;pseudo=true;start_range=.,3046874 NZ_CP089942.1 Protein Homology CDS 3046874 3047272 . - 0 ID=cds-LU604_RS16250;Parent=gene-LU604_RS16250;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014675.2;locus_tag=LU604_RS16250;partial=true;product=family 10 glycosylhydrolase;pseudo=true;start_range=.,3046874;transl_table=11 NZ_CP089942.1 RefSeq gene 3047525 3047665 . + . ID=gene-LU604_RS16255;Name=LU604_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16255;old_locus_tag=LU604_16255 NZ_CP089942.1 GeneMarkS-2+ CDS 3047525 3047665 . + 0 ID=cds-WP_016191994.1;Parent=gene-LU604_RS16255;Dbxref=Genbank:WP_016191994.1;Name=WP_016191994.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16255;product=Transposon resolvase;protein_id=WP_016191994.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3047691 3048166 . - . ID=gene-LU604_RS16260;Name=LU604_RS16260;end_range=3048166,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16260;old_locus_tag=LU604_16260;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3047691 3048166 . - 0 ID=cds-LU604_RS16260;Parent=gene-LU604_RS16260;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=3048166,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297906.1;locus_tag=LU604_RS16260;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3048464 3049612 . + . ID=gene-LU604_RS16265;Name=LU604_RS16265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16265;old_locus_tag=LU604_16265;pseudo=true NZ_CP089942.1 Protein Homology CDS 3048464 3049612 . + 0 ID=cds-LU604_RS16265;Parent=gene-LU604_RS16265;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667050.1;locus_tag=LU604_RS16265;product=acyltransferase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3050058 3050895 . - . ID=gene-LU604_RS16270;Name=LU604_RS16270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16270;old_locus_tag=LU604_16270;pseudo=true NZ_CP089942.1 Protein Homology CDS 3050058 3050895 . - 0 ID=cds-LU604_RS16270;Parent=gene-LU604_RS16270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192131.1;locus_tag=LU604_RS16270;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3051493 3051642 . - . ID=gene-LU604_RS16275;Name=LU604_RS16275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16275;old_locus_tag=LU604_16275;partial=true;pseudo=true;start_range=.,3051493 NZ_CP089942.1 Protein Homology CDS 3051493 3051642 . - 0 ID=cds-LU604_RS16275;Parent=gene-LU604_RS16275;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=LU604_RS16275;partial=true;product=integrase;pseudo=true;start_range=.,3051493;transl_table=11 NZ_CP089942.1 RefSeq gene 3051805 3053232 . + . ID=gene-LU604_RS16280;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=LU604_RS16280;old_locus_tag=LU604_16280 NZ_CP089942.1 Protein Homology CDS 3051805 3053232 . + 0 ID=cds-WP_016191990.1;Parent=gene-LU604_RS16280;Dbxref=Genbank:WP_016191990.1;Name=WP_016191990.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008852;gbkey=CDS;gene=sbcB;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,exodeoxyribonuclease I activity|0008852||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441101.1;locus_tag=LU604_RS16280;product=exodeoxyribonuclease I;protein_id=WP_016191990.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3053619 3054065 . + . ID=gene-LU604_RS16285;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS16285;old_locus_tag=LU604_16285 NZ_CP089942.1 Protein Homology CDS 3053619 3054065 . + 0 ID=cds-WP_233478785.1;Parent=gene-LU604_RS16285;Dbxref=Genbank:WP_233478785.1;Name=WP_233478785.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191989.1;locus_tag=LU604_RS16285;product=IS200/IS605 family transposase;protein_id=WP_233478785.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3054091 3054384 . - . ID=gene-LU604_RS16290;Name=LU604_RS16290;end_range=3054384,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16290;old_locus_tag=LU604_16290;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3054091 3054384 . - 0 ID=cds-LU604_RS16290;Parent=gene-LU604_RS16290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=3054384,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS16290;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3054441 3055481 . - . ID=gene-LU604_RS16295;Name=LU604_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16295;old_locus_tag=LU604_16295 NZ_CP089942.1 Protein Homology CDS 3054441 3055481 . - 0 ID=cds-WP_233478553.1-19;Parent=gene-LU604_RS16295;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS16295;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3055645 3056685 . - . ID=gene-LU604_RS16300;Name=LU604_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16300;old_locus_tag=LU604_16300 NZ_CP089942.1 Protein Homology CDS 3055645 3056685 . - 0 ID=cds-WP_233478553.1-20;Parent=gene-LU604_RS16300;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS16300;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3056789 3057069 . - . ID=gene-LU604_RS16305;Name=LU604_RS16305;end_range=3057069,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16305;old_locus_tag=LU604_16305;partial=true;pseudo=true;start_range=.,3056789 NZ_CP089942.1 Protein Homology CDS 3056789 3057069 . - 0 ID=cds-LU604_RS16305;Parent=gene-LU604_RS16305;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3057069,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296746.1;locus_tag=LU604_RS16305;partial=true;product=glutamine synthetase;pseudo=true;start_range=.,3056789;transl_table=11 NZ_CP089942.1 RefSeq gene 3057343 3058389 . + . ID=gene-LU604_RS16310;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=LU604_RS16310;old_locus_tag=LU604_16310 NZ_CP089942.1 Protein Homology CDS 3057343 3058389 . + 0 ID=cds-WP_016191984.1;Parent=gene-LU604_RS16310;Dbxref=Genbank:WP_016191984.1;Name=WP_016191984.1;Ontology_term=GO:0006012,GO:0008108;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201350.1;locus_tag=LU604_RS16310;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_016191984.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3058392 3059540 . + . ID=gene-LU604_RS16315;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=LU604_RS16315;old_locus_tag=LU604_16315 NZ_CP089942.1 Protein Homology CDS 3058392 3059540 . + 0 ID=cds-WP_233478788.1;Parent=gene-LU604_RS16315;Dbxref=Genbank:WP_233478788.1;Name=WP_233478788.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851889.1;locus_tag=LU604_RS16315;product=galactokinase;protein_id=WP_233478788.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3059534 3060574 . + . ID=gene-LU604_RS16320;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=LU604_RS16320;old_locus_tag=LU604_16320 NZ_CP089942.1 Protein Homology CDS 3059534 3060574 . + 0 ID=cds-WP_233478789.1;Parent=gene-LU604_RS16320;Dbxref=Genbank:WP_233478789.1;Name=WP_233478789.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156698.1;locus_tag=LU604_RS16320;product=galactose-1-epimerase;protein_id=WP_233478789.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3060728 3061480 . + . ID=gene-LU604_RS16325;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=LU604_RS16325;old_locus_tag=LU604_16325 NZ_CP089942.1 Protein Homology CDS 3060728 3061480 . + 0 ID=cds-WP_233478790.1;Parent=gene-LU604_RS16325;Dbxref=Genbank:WP_233478790.1;Name=WP_233478790.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=LU604_RS16325;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_233478790.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3061535 3062587 . - . ID=gene-LU604_RS16330;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=LU604_RS16330;old_locus_tag=LU604_16330 NZ_CP089942.1 Protein Homology CDS 3061535 3062587 . - 0 ID=cds-WP_233478791.1;Parent=gene-LU604_RS16330;Dbxref=Genbank:WP_233478791.1;Name=WP_233478791.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020457071.1;locus_tag=LU604_RS16330;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_233478791.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3062871 3063225 . + . ID=gene-LU604_RS16335;Name=LU604_RS16335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16335;old_locus_tag=LU604_16335;pseudo=true NZ_CP089942.1 Protein Homology CDS 3062871 3063225 . + 0 ID=cds-LU604_RS16335;Parent=gene-LU604_RS16335;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010260164.1;locus_tag=LU604_RS16335;product=protein YbgS;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3063388 3063696 . + . ID=gene-LU604_RS16340;Name=tnpA;end_range=3063696,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS16340;old_locus_tag=LU604_16340;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3063388 3063696 . + 0 ID=cds-LU604_RS16340;Parent=gene-LU604_RS16340;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3063696,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU604_RS16340;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3063769 3064943 . + . ID=gene-LU604_RS16345;Name=LU604_RS16345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16345;old_locus_tag=LU604_16345;pseudo=true NZ_CP089942.1 Protein Homology CDS 3063769 3064943 . + 0 ID=cds-LU604_RS16345;Parent=gene-LU604_RS16345;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612096.1;locus_tag=LU604_RS16345;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3064954 3065085 . + . ID=gene-LU604_RS16350;Name=LU604_RS16350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16350;old_locus_tag=LU604_16350;partial=true;pseudo=true;start_range=.,3064954 NZ_CP089942.1 Protein Homology CDS 3064954 3065085 . + 0 ID=cds-LU604_RS16350;Parent=gene-LU604_RS16350;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192772.1;locus_tag=LU604_RS16350;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,3064954;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3065458 3065946 . + . ID=gene-LU604_RS16355;Name=LU604_RS16355;end_range=3065946,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16355;old_locus_tag=LU604_16355;partial=true;pseudo=true;start_range=.,3065458 NZ_CP089942.1 Protein Homology CDS 3065458 3065946 . + 0 ID=cds-LU604_RS16355;Parent=gene-LU604_RS16355;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006812,GO:0008324,GO:0015562,GO:0016020;end_range=3065946,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cation transmembrane transporter activity|0008324||IEA,efflux transmembrane transporter activity|0015562||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156689.1;locus_tag=LU604_RS16355;partial=true;product=cation diffusion facilitator family transporter;pseudo=true;start_range=.,3065458;transl_table=11 NZ_CP089942.1 RefSeq gene 3066001 3066711 . - . ID=gene-LU604_RS16360;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=LU604_RS16360;old_locus_tag=LU604_16360 NZ_CP089942.1 Protein Homology CDS 3066001 3066711 . - 0 ID=cds-WP_233478792.1;Parent=gene-LU604_RS16360;Dbxref=Genbank:WP_233478792.1;Name=WP_233478792.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191977.1;locus_tag=LU604_RS16360;product=nicotinamide riboside transporter PnuC;protein_id=WP_233478792.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3066748 3067781 . - . ID=gene-LU604_RS16365;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=pseudogene;locus_tag=LU604_RS16365;old_locus_tag=LU604_16365;pseudo=true NZ_CP089942.1 Protein Homology CDS 3066748 3067781 . - 0 ID=cds-LU604_RS16365;Parent=gene-LU604_RS16365;Note=frameshifted;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456177.1;locus_tag=LU604_RS16365;product=quinolinate synthase NadA;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3067902 3068429 . - . ID=gene-LU604_RS16370;Name=LU604_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16370;old_locus_tag=LU604_16370 NZ_CP089942.1 Protein Homology CDS 3067902 3068429 . - 0 ID=cds-WP_016191974.1;Parent=gene-LU604_RS16370;Dbxref=Genbank:WP_016191974.1;Name=WP_016191974.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201339.1;locus_tag=LU604_RS16370;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_016191974.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3069610 3069804 . - . ID=gene-LU604_RS16375;Name=LU604_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16375;old_locus_tag=LU604_16375 NZ_CP089942.1 Protein Homology CDS 3069610 3069804 . - 0 ID=cds-WP_233478793.1;Parent=gene-LU604_RS16375;Dbxref=Genbank:WP_233478793.1;Name=WP_233478793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000094456.1;locus_tag=LU604_RS16375;product=DUF3950 domain-containing protein;protein_id=WP_233478793.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3070004 3070189 . + . ID=gene-LU604_RS16380;Name=LU604_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16380;old_locus_tag=LU604_16380 NZ_CP089942.1 Protein Homology CDS 3070004 3070189 . + 0 ID=cds-WP_233478794.1;Parent=gene-LU604_RS16380;Dbxref=Genbank:WP_233478794.1;Name=WP_233478794.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033153.2;locus_tag=LU604_RS16380;product=host cell division inhibitor Icd-like protein;protein_id=WP_233478794.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3070186 3070482 . + . ID=gene-LU604_RS16385;Name=LU604_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16385;old_locus_tag=LU604_16385 NZ_CP089942.1 GeneMarkS-2+ CDS 3070186 3070482 . + 0 ID=cds-WP_233478795.1;Parent=gene-LU604_RS16385;Dbxref=Genbank:WP_233478795.1;Name=WP_233478795.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16385;product=hypothetical protein;protein_id=WP_233478795.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3070695 3071600 . + . ID=gene-LU604_RS16390;Name=LU604_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16390;old_locus_tag=LU604_16390 NZ_CP089942.1 Protein Homology CDS 3070695 3071600 . + 0 ID=cds-WP_233478796.1;Parent=gene-LU604_RS16390;Dbxref=Genbank:WP_233478796.1;Name=WP_233478796.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021628.2;locus_tag=LU604_RS16390;product=Mu-like prophage major head subunit gpT family protein;protein_id=WP_233478796.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3071689 3072081 . + . ID=gene-LU604_RS16395;Name=LU604_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16395;old_locus_tag=LU604_16395 NZ_CP089942.1 Protein Homology CDS 3071689 3072081 . + 0 ID=cds-WP_233478797.1;Parent=gene-LU604_RS16395;Dbxref=Genbank:WP_233478797.1;Name=WP_233478797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001568921.1;locus_tag=LU604_RS16395;product=hypothetical protein;protein_id=WP_233478797.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3072498 3074369 . + . ID=gene-LU604_RS16400;Name=LU604_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16400;old_locus_tag=LU604_16400 NZ_CP089942.1 Protein Homology CDS 3072498 3074369 . + 0 ID=cds-WP_233478798.1;Parent=gene-LU604_RS16400;Dbxref=Genbank:WP_233478798.1;Name=WP_233478798.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021648.2;locus_tag=LU604_RS16400;product=phage tail tape measure protein;protein_id=WP_233478798.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3074502 3074660 . + . ID=gene-LU604_RS16405;Name=LU604_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16405;old_locus_tag=LU604_16405 NZ_CP089942.1 GeneMarkS-2+ CDS 3074502 3074660 . + 0 ID=cds-WP_233481341.1;Parent=gene-LU604_RS16405;Dbxref=Genbank:WP_233481341.1;Name=WP_233481341.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16405;product=hypothetical protein;protein_id=WP_233481341.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3074872 3075912 . + . ID=gene-LU604_RS16410;Name=LU604_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16410;old_locus_tag=LU604_16410 NZ_CP089942.1 Protein Homology CDS 3074872 3075912 . + 0 ID=cds-WP_233478553.1-21;Parent=gene-LU604_RS16410;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS16410;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3076095 3076589 . + . ID=gene-LU604_RS16415;Name=LU604_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16415;old_locus_tag=LU604_16415 NZ_CP089942.1 Protein Homology CDS 3076095 3076589 . + 0 ID=cds-WP_233478800.1;Parent=gene-LU604_RS16415;Dbxref=Genbank:WP_233478800.1;Name=WP_233478800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303403.1;locus_tag=LU604_RS16415;product=hypothetical protein;protein_id=WP_233478800.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3076702 3078034 . + . ID=gene-LU604_RS16420;Name=LU604_RS16420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16420;old_locus_tag=LU604_16420;partial=true;pseudo=true;start_range=.,3076702 NZ_CP089942.1 Protein Homology CDS 3076702 3078034 . + 0 ID=cds-LU604_RS16420;Parent=gene-LU604_RS16420;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008109030.1;locus_tag=LU604_RS16420;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,3076702;transl_table=11 NZ_CP089942.1 RefSeq gene 3078206 3078281 . - . ID=gene-LU604_RS16425;Name=LU604_RS16425;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS16425;old_locus_tag=LU604_16425 NZ_CP089942.1 tRNAscan-SE tRNA 3078206 3078281 . - . ID=rna-LU604_RS16425;Parent=gene-LU604_RS16425;anticodon=(pos:complement(3078246..3078248));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS16425;product=tRNA-Lys NZ_CP089942.1 tRNAscan-SE exon 3078206 3078281 . - . ID=exon-LU604_RS16425-1;Parent=rna-LU604_RS16425;anticodon=(pos:complement(3078246..3078248));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS16425;product=tRNA-Lys NZ_CP089942.1 RefSeq gene 3078447 3079223 . - . ID=gene-LU604_RS16430;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=LU604_RS16430;old_locus_tag=LU604_16430 NZ_CP089942.1 Protein Homology CDS 3078447 3079223 . - 0 ID=cds-WP_233478801.1;Parent=gene-LU604_RS16430;Dbxref=Genbank:WP_233478801.1;Name=WP_233478801.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156683.1;locus_tag=LU604_RS16430;product=cell division protein CpoB;protein_id=WP_233478801.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3079233 3079748 . - . ID=gene-LU604_RS16435;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=LU604_RS16435;old_locus_tag=LU604_16435 NZ_CP089942.1 Protein Homology CDS 3079233 3079748 . - 0 ID=cds-WP_016191970.1;Parent=gene-LU604_RS16435;Dbxref=Genbank:WP_016191970.1;Name=WP_016191970.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156682.1;locus_tag=LU604_RS16435;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_016191970.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3079793 3081085 . - . ID=gene-LU604_RS16440;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=LU604_RS16440;old_locus_tag=LU604_16440 NZ_CP089942.1 Protein Homology CDS 3079793 3081085 . - 0 ID=cds-WP_016191969.1;Parent=gene-LU604_RS16440;Dbxref=Genbank:WP_016191969.1;Name=WP_016191969.1;Ontology_term=GO:0006810,GO:0005215,GO:0030288;gbkey=CDS;gene=tolB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308802.1;locus_tag=LU604_RS16440;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_016191969.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3081204 3082355 . - . ID=gene-LU604_RS16445;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=LU604_RS16445;old_locus_tag=LU604_16445 NZ_CP089942.1 Protein Homology CDS 3081204 3082355 . - 0 ID=cds-WP_016191968.1;Parent=gene-LU604_RS16445;Dbxref=Genbank:WP_016191968.1;Name=WP_016191968.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010260767.1;locus_tag=LU604_RS16445;product=cell envelope integrity protein TolA;protein_id=WP_016191968.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3082385 3082813 . - . ID=gene-LU604_RS16450;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=LU604_RS16450;old_locus_tag=LU604_16450 NZ_CP089942.1 Protein Homology CDS 3082385 3082813 . - 0 ID=cds-WP_016191967.1;Parent=gene-LU604_RS16450;Dbxref=Genbank:WP_016191967.1;Name=WP_016191967.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=LU604_RS16450;product=colicin uptake protein TolR;protein_id=WP_016191967.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3082822 3083505 . - . ID=gene-LU604_RS16455;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=LU604_RS16455;old_locus_tag=LU604_16455 NZ_CP089942.1 Protein Homology CDS 3082822 3083505 . - 0 ID=cds-WP_016191966.1;Parent=gene-LU604_RS16455;Dbxref=Genbank:WP_016191966.1;Name=WP_016191966.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671365.1;locus_tag=LU604_RS16455;product=Tol-Pal system protein TolQ;protein_id=WP_016191966.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3083502 3083906 . - . ID=gene-LU604_RS16460;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=LU604_RS16460;old_locus_tag=LU604_16460 NZ_CP089942.1 Protein Homology CDS 3083502 3083906 . - 0 ID=cds-WP_016191965.1;Parent=gene-LU604_RS16460;Dbxref=Genbank:WP_016191965.1;Name=WP_016191965.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965302.1;locus_tag=LU604_RS16460;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_016191965.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3084391 3084501 . - . ID=gene-LU604_RS16465;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=LU604_RS16465;old_locus_tag=LU604_16465 NZ_CP089942.1 Protein Homology CDS 3084391 3084501 . - 0 ID=cds-WP_016191964.1;Parent=gene-LU604_RS16465;Dbxref=Genbank:WP_016191964.1;Name=WP_016191964.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012016632.1;locus_tag=LU604_RS16465;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_016191964.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3084517 3085656 . - . ID=gene-LU604_RS16470;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=LU604_RS16470;old_locus_tag=LU604_16470 NZ_CP089942.1 Protein Homology CDS 3084517 3085656 . - 0 ID=cds-WP_016191963.1;Parent=gene-LU604_RS16470;Dbxref=Genbank:WP_016191963.1;Name=WP_016191963.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308796.1;locus_tag=LU604_RS16470;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_016191963.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3085653 3087239 . - . ID=gene-LU604_RS16475;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=LU604_RS16475;old_locus_tag=LU604_16475 NZ_CP089942.1 Protein Homology CDS 3085653 3087239 . - 0 ID=cds-WP_016191962.1;Parent=gene-LU604_RS16475;Dbxref=Genbank:WP_016191962.1;Name=WP_016191962.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799189.1;locus_tag=LU604_RS16475;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_016191962.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3087764 3088267 . - . ID=gene-LU604_RS16480;Name=LU604_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16480;old_locus_tag=LU604_16480 NZ_CP089942.1 Protein Homology CDS 3087764 3088267 . - 0 ID=cds-WP_233478802.1;Parent=gene-LU604_RS16480;Dbxref=Genbank:WP_233478802.1;Name=WP_233478802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU604_RS16480;product=IS1 family transposase;protein_id=WP_233478802.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3088186 3088461 . - . ID=gene-LU604_RS16485;Name=LU604_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16485;old_locus_tag=LU604_16485 NZ_CP089942.1 Protein Homology CDS 3088186 3088461 . - 0 ID=cds-WP_233478803.1;Parent=gene-LU604_RS16485;Dbxref=Genbank:WP_233478803.1;Name=WP_233478803.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU604_RS16485;product=IS1-like element transposase;protein_id=WP_233478803.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3088624 3089499 . - . ID=gene-LU604_RS16490;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=LU604_RS16490;old_locus_tag=LU604_16490 NZ_CP089942.1 Protein Homology CDS 3088624 3089499 . - 0 ID=cds-WP_016191961.1;Parent=gene-LU604_RS16490;Dbxref=Genbank:WP_016191961.1;Name=WP_016191961.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003853148.1;locus_tag=LU604_RS16490;product=succinate--CoA ligase subunit alpha;protein_id=WP_016191961.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3089499 3090665 . - . ID=gene-LU604_RS16495;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=LU604_RS16495;old_locus_tag=LU604_16495 NZ_CP089942.1 Protein Homology CDS 3089499 3090665 . - 0 ID=cds-WP_016191960.1;Parent=gene-LU604_RS16495;Dbxref=Genbank:WP_016191960.1;Name=WP_016191960.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=LU604_RS16495;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_016191960.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3090769 3091989 . - . ID=gene-LU604_RS16500;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=LU604_RS16500;old_locus_tag=LU604_16500 NZ_CP089942.1 Protein Homology CDS 3090769 3091989 . - 0 ID=cds-WP_233478804.1;Parent=gene-LU604_RS16500;Dbxref=Genbank:WP_233478804.1;Name=WP_233478804.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308779.1;locus_tag=LU604_RS16500;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_233478804.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3092004 3094811 . - . ID=gene-LU604_RS16505;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=LU604_RS16505;old_locus_tag=LU604_16505 NZ_CP089942.1 Protein Homology CDS 3092004 3094811 . - 0 ID=cds-WP_233478805.1;Parent=gene-LU604_RS16505;Dbxref=Genbank:WP_233478805.1;Name=WP_233478805.1;Ontology_term=GO:0006099,GO:0006554,GO:0006568,GO:0004591,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,lysine catabolic process|0006554||IEA,tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225869.1;locus_tag=LU604_RS16505;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_233478805.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3095092 3095808 . - . ID=gene-LU604_RS16510;Name=LU604_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16510;old_locus_tag=LU604_16510 NZ_CP089942.1 Protein Homology CDS 3095092 3095808 . - 0 ID=cds-WP_233481342.1;Parent=gene-LU604_RS16510;Dbxref=Genbank:WP_233481342.1;Name=WP_233481342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225868.1;locus_tag=LU604_RS16510;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_233481342.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3095827 3097593 . - . ID=gene-LU604_RS16515;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=LU604_RS16515;old_locus_tag=LU604_16515 NZ_CP089942.1 Protein Homology CDS 3095827 3097593 . - 0 ID=cds-WP_233478806.1;Parent=gene-LU604_RS16515;Dbxref=Genbank:WP_233478806.1;Name=WP_233478806.1;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=LU604_RS16515;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_233478806.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3097595 3097942 . - . ID=gene-LU604_RS16520;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=LU604_RS16520;old_locus_tag=LU604_16520 NZ_CP089942.1 Protein Homology CDS 3097595 3097942 . - 0 ID=cds-WP_016191955.1;Parent=gene-LU604_RS16520;Dbxref=Genbank:WP_016191955.1;Name=WP_016191955.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082678.1;locus_tag=LU604_RS16520;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_016191955.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3097936 3098325 . - . ID=gene-LU604_RS16525;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=LU604_RS16525;old_locus_tag=LU604_16525 NZ_CP089942.1 Protein Homology CDS 3097936 3098325 . - 0 ID=cds-WP_016191954.1;Parent=gene-LU604_RS16525;Dbxref=Genbank:WP_016191954.1;Name=WP_016191954.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045281;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,succinate dehydrogenase complex|0045281||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210722.1;locus_tag=LU604_RS16525;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_016191954.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3098938 3100221 . + . ID=gene-LU604_RS16530;Name=LU604_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16530;old_locus_tag=LU604_16530 NZ_CP089942.1 Protein Homology CDS 3098938 3100221 . + 0 ID=cds-WP_233478808.1;Parent=gene-LU604_RS16530;Dbxref=Genbank:WP_233478808.1;Name=WP_233478808.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156668.1;locus_tag=LU604_RS16530;product=citrate synthase;protein_id=WP_233478808.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3100255 3101038 . - . ID=gene-LU604_RS16535;Name=nei;gbkey=Gene;gene=nei;gene_biotype=pseudogene;locus_tag=LU604_RS16535;old_locus_tag=LU604_16535;pseudo=true NZ_CP089942.1 Protein Homology CDS 3100255 3101038 . - 0 ID=cds-LU604_RS16535;Parent=gene-LU604_RS16535;Note=frameshifted;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746462.1;locus_tag=LU604_RS16535;product=endonuclease VIII;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3101352 3101708 . + . ID=gene-LU604_RS16540;Name=LU604_RS16540;end_range=3101708,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16540;old_locus_tag=LU604_16540;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3101352 3101708 . + 0 ID=cds-LU604_RS16540;Parent=gene-LU604_RS16540;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3101708,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS16540;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3101805 3102543 . - . ID=gene-LU604_RS16545;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=pseudogene;locus_tag=LU604_RS16545;old_locus_tag=LU604_16545;pseudo=true NZ_CP089942.1 Protein Homology CDS 3101805 3102543 . - 0 ID=cds-LU604_RS16545;Parent=gene-LU604_RS16545;Note=frameshifted%3B internal stop;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013576448.1;locus_tag=LU604_RS16545;product=5-oxoprolinase subunit PxpA;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3102527 3103465 . - . ID=gene-LU604_RS16550;Name=LU604_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16550;old_locus_tag=LU604_16550 NZ_CP089942.1 Protein Homology CDS 3102527 3103465 . - 0 ID=cds-WP_233478809.1;Parent=gene-LU604_RS16550;Dbxref=Genbank:WP_233478809.1;Name=WP_233478809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668723.1;locus_tag=LU604_RS16550;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_233478809.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3103459 3104105 . - . ID=gene-LU604_RS16555;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=pseudogene;locus_tag=LU604_RS16555;old_locus_tag=LU604_16555;pseudo=true NZ_CP089942.1 Protein Homology CDS 3103459 3104105 . - 0 ID=cds-LU604_RS16555;Parent=gene-LU604_RS16555;Note=frameshifted;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010299167.1;locus_tag=LU604_RS16555;product=5-oxoprolinase subunit PxpB;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3104219 3104962 . - . ID=gene-LU604_RS16560;Name=LU604_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16560;old_locus_tag=LU604_16560 NZ_CP089942.1 Protein Homology CDS 3104219 3104962 . - 0 ID=cds-WP_016191945.1;Parent=gene-LU604_RS16560;Dbxref=Genbank:WP_016191945.1;Name=WP_016191945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798871.1;locus_tag=LU604_RS16560;product=type 2 GTP cyclohydrolase I;protein_id=WP_016191945.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3105078 3106499 . - . ID=gene-LU604_RS16565;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=LU604_RS16565;old_locus_tag=LU604_16565 NZ_CP089942.1 Protein Homology CDS 3105078 3106499 . - 0 ID=cds-WP_016191944.1;Parent=gene-LU604_RS16565;Dbxref=Genbank:WP_016191944.1;Name=WP_016191944.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799224.1;locus_tag=LU604_RS16565;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_016191944.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3106521 3107477 . - . ID=gene-LU604_RS16570;Name=LU604_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16570;old_locus_tag=LU604_16570 NZ_CP089942.1 Protein Homology CDS 3106521 3107477 . - 0 ID=cds-WP_016191943.1;Parent=gene-LU604_RS16570;Dbxref=Genbank:WP_016191943.1;Name=WP_016191943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543746.1;locus_tag=LU604_RS16570;product=DUF523 and DUF1722 domain-containing protein;protein_id=WP_016191943.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3108291 3108974 . + . ID=gene-LU604_RS16575;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=LU604_RS16575;old_locus_tag=LU604_16575 NZ_CP089942.1 Protein Homology CDS 3108291 3108974 . + 0 ID=cds-WP_233478810.1;Parent=gene-LU604_RS16575;Dbxref=Genbank:WP_233478810.1;Name=WP_233478810.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191942.1;locus_tag=LU604_RS16575;product=two-component system response regulator KdpE;protein_id=WP_233478810.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3109283 3110923 . - . ID=gene-LU604_RS16580;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=LU604_RS16580;old_locus_tag=LU604_16580 NZ_CP089942.1 Protein Homology CDS 3109283 3110923 . - 0 ID=cds-WP_016191941.1;Parent=gene-LU604_RS16580;Dbxref=Genbank:WP_016191941.1;Name=WP_016191941.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415214.1;locus_tag=LU604_RS16580;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_016191941.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3110954 3111505 . - . ID=gene-LU604_RS16585;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=LU604_RS16585;old_locus_tag=LU604_16585 NZ_CP089942.1 Protein Homology CDS 3110954 3111505 . - 0 ID=cds-WP_233478811.1;Parent=gene-LU604_RS16585;Dbxref=Genbank:WP_233478811.1;Name=WP_233478811.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357126.1;locus_tag=LU604_RS16585;product=replication initiation negative regulator SeqA;protein_id=WP_233478811.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3111764 3112528 . + . ID=gene-LU604_RS16590;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=LU604_RS16590;old_locus_tag=LU604_16590 NZ_CP089942.1 Protein Homology CDS 3111764 3112528 . + 0 ID=cds-WP_233478812.1;Parent=gene-LU604_RS16590;Dbxref=Genbank:WP_233478812.1;Name=WP_233478812.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191939.1;locus_tag=LU604_RS16590;product=esterase;protein_id=WP_233478812.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3112679 3112960 . + . ID=gene-LU604_RS16595;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=LU604_RS16595;old_locus_tag=LU604_16595 NZ_CP089942.1 Protein Homology CDS 3112679 3112960 . + 0 ID=cds-WP_016191938.1;Parent=gene-LU604_RS16595;Dbxref=Genbank:WP_016191938.1;Name=WP_016191938.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163374.1;locus_tag=LU604_RS16595;product=LexA regulated protein;protein_id=WP_016191938.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3113117 3113647 . + . ID=gene-LU604_RS16600;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=LU604_RS16600;old_locus_tag=LU604_16600 NZ_CP089942.1 Protein Homology CDS 3113117 3113647 . + 0 ID=cds-WP_016191937.1;Parent=gene-LU604_RS16600;Dbxref=Genbank:WP_016191937.1;Name=WP_016191937.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308742.1;locus_tag=LU604_RS16600;product=flavodoxin FldA;protein_id=WP_016191937.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3114011 3114457 . + . ID=gene-LU604_RS16605;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=LU604_RS16605;old_locus_tag=LU604_16605 NZ_CP089942.1 Protein Homology CDS 3114011 3114457 . + 0 ID=cds-WP_233478813.1;Parent=gene-LU604_RS16605;Dbxref=Genbank:WP_233478813.1;Name=WP_233478813.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454058.1;locus_tag=LU604_RS16605;product=ferric iron uptake transcriptional regulator;protein_id=WP_233478813.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3114810 3114989 . - . ID=gene-LU604_RS16610;Name=LU604_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16610;old_locus_tag=LU604_16610 NZ_CP089942.1 GeneMarkS-2+ CDS 3114810 3114989 . - 0 ID=cds-WP_233478814.1;Parent=gene-LU604_RS16610;Dbxref=Genbank:WP_233478814.1;Name=WP_233478814.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16610;product=hypothetical protein;protein_id=WP_233478814.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3115015 3115392 . - . ID=gene-LU604_RS16615;Name=LU604_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16615;old_locus_tag=LU604_16615 NZ_CP089942.1 GeneMarkS-2+ CDS 3115015 3115392 . - 0 ID=cds-WP_233478815.1;Parent=gene-LU604_RS16615;Dbxref=Genbank:WP_233478815.1;Name=WP_233478815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16615;product=hypothetical protein;protein_id=WP_233478815.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3116070 3116243 . - . ID=gene-LU604_RS16620;Name=LU604_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16620;old_locus_tag=LU604_16620 NZ_CP089942.1 GeneMarkS-2+ CDS 3116070 3116243 . - 0 ID=cds-WP_161796959.1;Parent=gene-LU604_RS16620;Dbxref=Genbank:WP_161796959.1;Name=WP_161796959.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16620;product=hypothetical protein;protein_id=WP_161796959.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3116385 3116939 . - . ID=gene-LU604_RS16625;Name=LU604_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16625;old_locus_tag=LU604_16625 NZ_CP089942.1 GeneMarkS-2+ CDS 3116385 3116939 . - 0 ID=cds-WP_233478816.1;Parent=gene-LU604_RS16625;Dbxref=Genbank:WP_233478816.1;Name=WP_233478816.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16625;product=hypothetical protein;protein_id=WP_233478816.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3116905 3119559 . - . ID=gene-LU604_RS16630;Name=LU604_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16630;old_locus_tag=LU604_16630 NZ_CP089942.1 Protein Homology CDS 3116905 3119559 . - 0 ID=cds-WP_016191933.1;Parent=gene-LU604_RS16630;Dbxref=Genbank:WP_016191933.1;Name=WP_016191933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454059.1;locus_tag=LU604_RS16630;product=beta-N-acetylhexosaminidase;protein_id=WP_016191933.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3119577 3119771 . - . ID=gene-LU604_RS16635;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=LU604_RS16635;old_locus_tag=LU604_16635 NZ_CP089942.1 Protein Homology CDS 3119577 3119771 . - 0 ID=cds-WP_016191932.1;Parent=gene-LU604_RS16635;Dbxref=Genbank:WP_016191932.1;Name=WP_016191932.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: protein motif:HMM:NF025348.2;locus_tag=LU604_RS16635;product=ChiQ/YbfN family lipoprotein;protein_id=WP_016191932.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3119810 3121213 . - . ID=gene-LU604_RS16640;Name=LU604_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16640;old_locus_tag=LU604_16640 NZ_CP089942.1 Protein Homology CDS 3119810 3121213 . - 0 ID=cds-WP_233478817.1;Parent=gene-LU604_RS16640;Dbxref=Genbank:WP_233478817.1;Name=WP_233478817.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191931.1;locus_tag=LU604_RS16640;product=OprD family outer membrane porin;protein_id=WP_233478817.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3122368 3124035 . - . ID=gene-LU604_RS16645;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=LU604_RS16645;old_locus_tag=LU604_16645 NZ_CP089942.1 Protein Homology CDS 3122368 3124035 . - 0 ID=cds-WP_233478818.1;Parent=gene-LU604_RS16645;Dbxref=Genbank:WP_233478818.1;Name=WP_233478818.1;Ontology_term=GO:0006425,GO:0004819,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=glutamine-tRNA ligase activity|0004819||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442044.1;locus_tag=LU604_RS16645;product=glutamine--tRNA ligase;protein_id=WP_233478818.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3124312 3126339 . - . ID=gene-LU604_RS16650;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=LU604_RS16650;old_locus_tag=LU604_16650 NZ_CP089942.1 Protein Homology CDS 3124312 3126339 . - 0 ID=cds-WP_233478819.1;Parent=gene-LU604_RS16650;Dbxref=Genbank:WP_233478819.1;Name=WP_233478819.1;Ontology_term=GO:0015572;gbkey=CDS;gene=nagE;go_function=N-acetylglucosamine transmembrane transporter activity|0015572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593180.1;locus_tag=LU604_RS16650;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;protein_id=WP_233478819.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3126675 3127475 . + . ID=gene-LU604_RS16655;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=LU604_RS16655;old_locus_tag=LU604_16655 NZ_CP089942.1 Protein Homology CDS 3126675 3127475 . + 0 ID=cds-WP_016191928.1;Parent=gene-LU604_RS16655;Dbxref=Genbank:WP_016191928.1;Name=WP_016191928.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459669.1;locus_tag=LU604_RS16655;product=glucosamine-6-phosphate deaminase;protein_id=WP_016191928.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3127527 3128666 . + . ID=gene-LU604_RS16660;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=LU604_RS16660;old_locus_tag=LU604_16660 NZ_CP089942.1 Protein Homology CDS 3127527 3128666 . + 0 ID=cds-WP_016191927.1;Parent=gene-LU604_RS16660;Dbxref=Genbank:WP_016191927.1;Name=WP_016191927.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376951.1;locus_tag=LU604_RS16660;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_016191927.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3128683 3129903 . + . ID=gene-LU604_RS16665;Name=LU604_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16665;old_locus_tag=LU604_16665 NZ_CP089942.1 Protein Homology CDS 3128683 3129903 . + 0 ID=cds-WP_233478820.1;Parent=gene-LU604_RS16665;Dbxref=Genbank:WP_233478820.1;Name=WP_233478820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308733.1;locus_tag=LU604_RS16665;product=ROK family transcriptional regulator;protein_id=WP_233478820.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3129935 3130687 . + . ID=gene-LU604_RS16670;Name=LU604_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16670;old_locus_tag=LU604_16670 NZ_CP089942.1 Protein Homology CDS 3129935 3130687 . + 0 ID=cds-WP_233478821.1;Parent=gene-LU604_RS16670;Dbxref=Genbank:WP_233478821.1;Name=WP_233478821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308732.1;locus_tag=LU604_RS16670;product=HAD-IIA family hydrolase;protein_id=WP_233478821.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3130960 3132633 . + . ID=gene-LU604_RS16675;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=LU604_RS16675;old_locus_tag=LU604_16675 NZ_CP089942.1 Protein Homology CDS 3130960 3132633 . + 0 ID=cds-WP_233478822.1;Parent=gene-LU604_RS16675;Dbxref=Genbank:WP_233478822.1;Name=WP_233478822.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191924.1;locus_tag=LU604_RS16675;product=asparagine synthase B;protein_id=WP_233478822.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3133033 3133109 . + . ID=gene-LU604_RS16680;Name=LU604_RS16680;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS16680;old_locus_tag=LU604_16680 NZ_CP089942.1 tRNAscan-SE tRNA 3133033 3133109 . + . ID=rna-LU604_RS16680;Parent=gene-LU604_RS16680;anticodon=(pos:3133067..3133069);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS16680;product=tRNA-Met NZ_CP089942.1 tRNAscan-SE exon 3133033 3133109 . + . ID=exon-LU604_RS16680-1;Parent=rna-LU604_RS16680;anticodon=(pos:3133067..3133069);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS16680;product=tRNA-Met NZ_CP089942.1 RefSeq gene 3133117 3133201 . + . ID=gene-LU604_RS16685;Name=LU604_RS16685;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS16685;old_locus_tag=LU604_16685 NZ_CP089942.1 tRNAscan-SE tRNA 3133117 3133201 . + . ID=rna-LU604_RS16685;Parent=gene-LU604_RS16685;anticodon=(pos:3133151..3133153);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS16685;product=tRNA-Leu NZ_CP089942.1 tRNAscan-SE exon 3133117 3133201 . + . ID=exon-LU604_RS16685-1;Parent=rna-LU604_RS16685;anticodon=(pos:3133151..3133153);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS16685;product=tRNA-Leu NZ_CP089942.1 RefSeq gene 3133225 3133299 . + . ID=gene-LU604_RS16690;Name=LU604_RS16690;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS16690;old_locus_tag=LU604_16690 NZ_CP089942.1 tRNAscan-SE tRNA 3133225 3133299 . + . ID=rna-LU604_RS16690;Parent=gene-LU604_RS16690;anticodon=(pos:3133257..3133259);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS16690;product=tRNA-Gln NZ_CP089942.1 tRNAscan-SE exon 3133225 3133299 . + . ID=exon-LU604_RS16690-1;Parent=rna-LU604_RS16690;anticodon=(pos:3133257..3133259);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS16690;product=tRNA-Gln NZ_CP089942.1 RefSeq gene 3133343 3133419 . + . ID=gene-LU604_RS16695;Name=LU604_RS16695;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS16695;old_locus_tag=LU604_16695 NZ_CP089942.1 tRNAscan-SE tRNA 3133343 3133419 . + . ID=rna-LU604_RS16695;Parent=gene-LU604_RS16695;anticodon=(pos:3133377..3133379);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS16695;product=tRNA-Met NZ_CP089942.1 tRNAscan-SE exon 3133343 3133419 . + . ID=exon-LU604_RS16695-1;Parent=rna-LU604_RS16695;anticodon=(pos:3133377..3133379);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS16695;product=tRNA-Met NZ_CP089942.1 RefSeq gene 3133427 3133501 . + . ID=gene-LU604_RS16700;Name=LU604_RS16700;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS16700;old_locus_tag=LU604_16700 NZ_CP089942.1 tRNAscan-SE tRNA 3133427 3133501 . + . ID=rna-LU604_RS16700;Parent=gene-LU604_RS16700;anticodon=(pos:3133459..3133461);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS16700;product=tRNA-Gln NZ_CP089942.1 tRNAscan-SE exon 3133427 3133501 . + . ID=exon-LU604_RS16700-1;Parent=rna-LU604_RS16700;anticodon=(pos:3133459..3133461);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS16700;product=tRNA-Gln NZ_CP089942.1 RefSeq gene 3133540 3133614 . + . ID=gene-LU604_RS16705;Name=LU604_RS16705;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS16705;old_locus_tag=LU604_16705 NZ_CP089942.1 tRNAscan-SE tRNA 3133540 3133614 . + . ID=rna-LU604_RS16705;Parent=gene-LU604_RS16705;anticodon=(pos:3133572..3133574);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS16705;product=tRNA-Gln NZ_CP089942.1 tRNAscan-SE exon 3133540 3133614 . + . ID=exon-LU604_RS16705-1;Parent=rna-LU604_RS16705;anticodon=(pos:3133572..3133574);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS16705;product=tRNA-Gln NZ_CP089942.1 RefSeq gene 3133716 3134906 . - . ID=gene-LU604_RS16710;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=LU604_RS16710;old_locus_tag=LU604_16710 NZ_CP089942.1 Protein Homology CDS 3133716 3134906 . - 0 ID=cds-WP_233478823.1;Parent=gene-LU604_RS16710;Dbxref=Genbank:WP_233478823.1;Name=WP_233478823.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191923.1;locus_tag=LU604_RS16710;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_233478823.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3135091 3136515 . + . ID=gene-LU604_RS16715;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=LU604_RS16715;old_locus_tag=LU604_16715 NZ_CP089942.1 Protein Homology CDS 3135091 3136515 . + 0 ID=cds-WP_233480818.1;Parent=gene-LU604_RS16715;Dbxref=Genbank:WP_233480818.1;Name=WP_233480818.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=LU604_RS16715;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_233480818.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3136727 3137791 . + . ID=gene-LU604_RS16720;Name=LU604_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16720;old_locus_tag=LU604_16720 NZ_CP089942.1 Protein Homology CDS 3136727 3137791 . + 0 ID=cds-WP_233478824.1;Parent=gene-LU604_RS16720;Dbxref=Genbank:WP_233478824.1;Name=WP_233478824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191921.1;locus_tag=LU604_RS16720;product=PhoH family protein;protein_id=WP_233478824.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3137788 3138261 . + . ID=gene-LU604_RS16725;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=LU604_RS16725;old_locus_tag=LU604_16725 NZ_CP089942.1 Protein Homology CDS 3137788 3138261 . + 0 ID=cds-WP_016191920.1;Parent=gene-LU604_RS16725;Dbxref=Genbank:WP_016191920.1;Name=WP_016191920.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015386892.1;locus_tag=LU604_RS16725;product=rRNA maturation RNase YbeY;protein_id=WP_016191920.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3138349 3139227 . + . ID=gene-LU604_RS16730;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=LU604_RS16730;old_locus_tag=LU604_16730 NZ_CP089942.1 Protein Homology CDS 3138349 3139227 . + 0 ID=cds-WP_233478825.1;Parent=gene-LU604_RS16730;Dbxref=Genbank:WP_233478825.1;Name=WP_233478825.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210342.1;locus_tag=LU604_RS16730;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_233478825.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3139234 3140766 . + . ID=gene-LU604_RS16735;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=LU604_RS16735;old_locus_tag=LU604_16735 NZ_CP089942.1 Protein Homology CDS 3139234 3140766 . + 0 ID=cds-WP_233478826.1;Parent=gene-LU604_RS16735;Dbxref=Genbank:WP_233478826.1;Name=WP_233478826.1;Ontology_term=GO:0006497,GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=protein lipidation|0006497||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191918.1;locus_tag=LU604_RS16735;product=apolipoprotein N-acyltransferase;protein_id=WP_233478826.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3140863 3141345 . - . ID=gene-LU604_RS16740;Name=LU604_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16740;old_locus_tag=LU604_16740 NZ_CP089942.1 Protein Homology CDS 3140863 3141345 . - 0 ID=cds-WP_233478827.1;Parent=gene-LU604_RS16740;Dbxref=Genbank:WP_233478827.1;Name=WP_233478827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004164103.1;locus_tag=LU604_RS16740;product=zinc ribbon-containing protein;protein_id=WP_233478827.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3141558 3144140 . + . ID=gene-LU604_RS16745;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=LU604_RS16745;old_locus_tag=LU604_16745 NZ_CP089942.1 Protein Homology CDS 3141558 3144140 . + 0 ID=cds-WP_233480819.1;Parent=gene-LU604_RS16745;Dbxref=Genbank:WP_233480819.1;Name=WP_233480819.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=LU604_RS16745;product=leucine--tRNA ligase;protein_id=WP_233480819.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3144155 3144751 . + . ID=gene-LU604_RS16750;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=LU604_RS16750;old_locus_tag=LU604_16750 NZ_CP089942.1 Protein Homology CDS 3144155 3144751 . + 0 ID=cds-WP_040465706.1;Parent=gene-LU604_RS16750;Dbxref=Genbank:WP_040465706.1;Name=WP_040465706.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156626.1;locus_tag=LU604_RS16750;product=LPS assembly lipoprotein LptE;protein_id=WP_040465706.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3144748 3145779 . + . ID=gene-LU604_RS16755;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=LU604_RS16755;old_locus_tag=LU604_16755 NZ_CP089942.1 Protein Homology CDS 3144748 3145779 . + 0 ID=cds-WP_233478828.1;Parent=gene-LU604_RS16755;Dbxref=Genbank:WP_233478828.1;Name=WP_233478828.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191914.1;locus_tag=LU604_RS16755;product=DNA polymerase III subunit delta;protein_id=WP_233478828.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3145772 3146437 . + . ID=gene-LU604_RS16760;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=LU604_RS16760;old_locus_tag=LU604_16760 NZ_CP089942.1 Protein Homology CDS 3145772 3146437 . + 0 ID=cds-WP_233478829.1;Parent=gene-LU604_RS16760;Dbxref=Genbank:WP_233478829.1;Name=WP_233478829.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191913.1;locus_tag=LU604_RS16760;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_233478829.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3146811 3147247 . - . ID=gene-LU604_RS16765;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS16765;old_locus_tag=LU604_16765;pseudo=true NZ_CP089942.1 Protein Homology CDS 3146811 3147247 . - 0 ID=cds-LU604_RS16765;Parent=gene-LU604_RS16765;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU604_RS16765;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3148011 3149146 . + . ID=gene-LU604_RS16770;Name=LU604_RS16770;end_range=3149146,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16770;old_locus_tag=LU604_16770;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3148011 3149146 . + 0 ID=cds-LU604_RS16770;Parent=gene-LU604_RS16770;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3149146,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015698571.1;locus_tag=LU604_RS16770;partial=true;product=chitinase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3149852 3150169 . + . ID=gene-LU604_RS16775;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=LU604_RS16775;old_locus_tag=LU604_16775 NZ_CP089942.1 Protein Homology CDS 3149852 3150169 . + 0 ID=cds-WP_016191906.1;Parent=gene-LU604_RS16775;Dbxref=Genbank:WP_016191906.1;Name=WP_016191906.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=LU604_RS16775;product=ribosome silencing factor;protein_id=WP_016191906.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3150173 3150643 . + . ID=gene-LU604_RS16780;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=LU604_RS16780;old_locus_tag=LU604_16780 NZ_CP089942.1 Protein Homology CDS 3150173 3150643 . + 0 ID=cds-WP_016191905.1;Parent=gene-LU604_RS16780;Dbxref=Genbank:WP_016191905.1;Name=WP_016191905.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=LU604_RS16780;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_016191905.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3150676 3152580 . + . ID=gene-LU604_RS16785;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=LU604_RS16785;old_locus_tag=LU604_16785 NZ_CP089942.1 Protein Homology CDS 3150676 3152580 . + 0 ID=cds-WP_016191904.1;Parent=gene-LU604_RS16785;Dbxref=Genbank:WP_016191904.1;Name=WP_016191904.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357097.1;locus_tag=LU604_RS16785;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_016191904.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3152583 3153695 . + . ID=gene-LU604_RS16790;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=LU604_RS16790;old_locus_tag=LU604_16790 NZ_CP089942.1 Protein Homology CDS 3152583 3153695 . + 0 ID=cds-WP_233478830.1;Parent=gene-LU604_RS16790;Dbxref=Genbank:WP_233478830.1;Name=WP_233478830.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156620.1;locus_tag=LU604_RS16790;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_233478830.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3153707 3154831 . + . ID=gene-LU604_RS16795;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=LU604_RS16795;old_locus_tag=LU604_16795 NZ_CP089942.1 Protein Homology CDS 3153707 3154831 . + 0 ID=cds-WP_233478831.1;Parent=gene-LU604_RS16795;Dbxref=Genbank:WP_233478831.1;Name=WP_233478831.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156619.1;locus_tag=LU604_RS16795;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_233478831.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3154963 3156174 . + . ID=gene-LU604_RS16800;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=LU604_RS16800;old_locus_tag=LU604_16800 NZ_CP089942.1 Protein Homology CDS 3154963 3156174 . + 0 ID=cds-WP_016191901.1;Parent=gene-LU604_RS16800;Dbxref=Genbank:WP_016191901.1;Name=WP_016191901.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191901.1;locus_tag=LU604_RS16800;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_016191901.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3156300 3156563 . + . ID=gene-LU604_RS16805;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=LU604_RS16805;old_locus_tag=LU604_16805 NZ_CP089942.1 Protein Homology CDS 3156300 3156563 . + 0 ID=cds-WP_016191900.1;Parent=gene-LU604_RS16805;Dbxref=Genbank:WP_016191900.1;Name=WP_016191900.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=LU604_RS16805;product=DUF493 family protein YbeD;protein_id=WP_016191900.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3156645 3157316 . + . ID=gene-LU604_RS16810;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=LU604_RS16810;old_locus_tag=LU604_16810 NZ_CP089942.1 Protein Homology CDS 3156645 3157316 . + 0 ID=cds-WP_040465705.1;Parent=gene-LU604_RS16810;Dbxref=Genbank:WP_040465705.1;Name=WP_040465705.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442073.1;locus_tag=LU604_RS16810;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_040465705.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3157489 3158454 . + . ID=gene-LU604_RS16815;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=LU604_RS16815;old_locus_tag=LU604_16815 NZ_CP089942.1 Protein Homology CDS 3157489 3158454 . + 0 ID=cds-WP_233478832.1;Parent=gene-LU604_RS16815;Dbxref=Genbank:WP_233478832.1;Name=WP_233478832.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459625.1;locus_tag=LU604_RS16815;product=lipoyl synthase;protein_id=WP_233478832.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3158491 3158976 . - . ID=gene-LU604_RS16820;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS16820;old_locus_tag=LU604_16820 NZ_CP089942.1 Protein Homology CDS 3158491 3158976 . - 0 ID=cds-WP_233478833.1;Parent=gene-LU604_RS16820;Dbxref=Genbank:WP_233478833.1;Name=WP_233478833.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192470.1;locus_tag=LU604_RS16820;product=IS200/IS605 family transposase;protein_id=WP_233478833.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3159144 3159350 . - . ID=gene-LU604_RS16825;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=LU604_RS16825;old_locus_tag=LU604_16825 NZ_CP089942.1 Protein Homology CDS 3159144 3159350 . - 0 ID=cds-WP_016191896.1;Parent=gene-LU604_RS16825;Dbxref=Genbank:WP_016191896.1;Name=WP_016191896.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805630.1;locus_tag=LU604_RS16825;product=twin-arginine translocase subunit TatE;protein_id=WP_016191896.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3159695 3160516 . - . ID=gene-LU604_RS16830;Name=LU604_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16830;old_locus_tag=LU604_16830 NZ_CP089942.1 Protein Homology CDS 3159695 3160516 . - 0 ID=cds-WP_233478834.1;Parent=gene-LU604_RS16830;Dbxref=Genbank:WP_233478834.1;Name=WP_233478834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015698171.1;locus_tag=LU604_RS16830;product=deaminated glutathione amidase;protein_id=WP_233478834.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3160675 3161103 . - . ID=gene-LU604_RS16835;Name=LU604_RS16835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16835;old_locus_tag=LU604_16835;pseudo=true NZ_CP089942.1 Protein Homology CDS 3160675 3161103 . - 0 ID=cds-LU604_RS16835;Parent=gene-LU604_RS16835;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201259.1;locus_tag=LU604_RS16835;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3161270 3161773 . - . ID=gene-LU604_RS16840;Name=LU604_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16840;old_locus_tag=LU604_16840 NZ_CP089942.1 Protein Homology CDS 3161270 3161773 . - 0 ID=cds-WP_233478835.1;Parent=gene-LU604_RS16840;Dbxref=Genbank:WP_233478835.1;Name=WP_233478835.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU604_RS16840;product=IS1 family transposase;protein_id=WP_233478835.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3161692 3161967 . - . ID=gene-LU604_RS16845;Name=LU604_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16845;old_locus_tag=LU604_16845 NZ_CP089942.1 Protein Homology CDS 3161692 3161967 . - 0 ID=cds-WP_233478836.1;Parent=gene-LU604_RS16845;Dbxref=Genbank:WP_233478836.1;Name=WP_233478836.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU604_RS16845;product=IS1-like element transposase;protein_id=WP_233478836.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3162258 3162467 . - . ID=gene-LU604_RS16850;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=LU604_RS16850;old_locus_tag=LU604_16850 NZ_CP089942.1 Protein Homology CDS 3162258 3162467 . - 0 ID=cds-WP_004156612.1;Parent=gene-LU604_RS16850;Dbxref=Genbank:WP_004156612.1;Name=WP_004156612.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225795.1;locus_tag=LU604_RS16850;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_004156612.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3162618 3163193 . - . ID=gene-LU604_RS16855;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=LU604_RS16855;old_locus_tag=LU604_16855 NZ_CP089942.1 Protein Homology CDS 3162618 3163193 . - 0 ID=cds-WP_233480820.1;Parent=gene-LU604_RS16855;Dbxref=Genbank:WP_233480820.1;Name=WP_233480820.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169132.1;locus_tag=LU604_RS16855;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_233480820.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3164184 3164426 . - . ID=gene-LU604_RS16860;Name=LU604_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16860;old_locus_tag=LU604_16860 NZ_CP089942.1 GeneMarkS-2+ CDS 3164184 3164426 . - 0 ID=cds-WP_233478837.1;Parent=gene-LU604_RS16860;Dbxref=Genbank:WP_233478837.1;Name=WP_233478837.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16860;product=hypothetical protein;protein_id=WP_233478837.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3164856 3165641 . - . ID=gene-LU604_RS16865;Name=LU604_RS16865;end_range=3165641,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16865;old_locus_tag=LU604_16865;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3164856 3165641 . - 0 ID=cds-LU604_RS16865;Parent=gene-LU604_RS16865;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=3165641,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=LU604_RS16865;partial=true;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3166028 3166898 . - . ID=gene-LU604_RS16870;Name=LU604_RS16870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16870;old_locus_tag=LU604_16870;partial=true;pseudo=true;start_range=.,3166028 NZ_CP089942.1 Protein Homology CDS 3166028 3166898 . - 0 ID=cds-LU604_RS16870;Parent=gene-LU604_RS16870;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011920327.1;locus_tag=LU604_RS16870;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,3166028;transl_table=11 NZ_CP089942.1 RefSeq gene 3167619 3168008 . - . ID=gene-LU604_RS16875;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=LU604_RS16875;old_locus_tag=LU604_16875 NZ_CP089942.1 Protein Homology CDS 3167619 3168008 . - 0 ID=cds-WP_233478838.1;Parent=gene-LU604_RS16875;Dbxref=Genbank:WP_233478838.1;Name=WP_233478838.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191886.1;locus_tag=LU604_RS16875;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_233478838.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3168008 3168340 . - . ID=gene-LU604_RS16880;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=LU604_RS16880;old_locus_tag=LU604_16880 NZ_CP089942.1 Protein Homology CDS 3168008 3168340 . - 0 ID=cds-WP_016191885.1;Parent=gene-LU604_RS16880;Dbxref=Genbank:WP_016191885.1;Name=WP_016191885.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008460715.1;locus_tag=LU604_RS16880;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_016191885.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3168337 3169998 . - . ID=gene-LU604_RS16885;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=LU604_RS16885;old_locus_tag=LU604_16885 NZ_CP089942.1 Protein Homology CDS 3168337 3169998 . - 0 ID=cds-WP_016191884.1;Parent=gene-LU604_RS16885;Dbxref=Genbank:WP_016191884.1;Name=WP_016191884.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201242.1;locus_tag=LU604_RS16885;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_016191884.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3170004 3170897 . - . ID=gene-LU604_RS16890;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=LU604_RS16890;old_locus_tag=LU604_16890 NZ_CP089942.1 Protein Homology CDS 3170004 3170897 . - 0 ID=cds-WP_233478839.1;Parent=gene-LU604_RS16890;Dbxref=Genbank:WP_233478839.1;Name=WP_233478839.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191883.1;locus_tag=LU604_RS16890;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_233478839.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3170894 3172876 . - . ID=gene-LU604_RS16895;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=LU604_RS16895;old_locus_tag=LU604_16895 NZ_CP089942.1 Protein Homology CDS 3170894 3172876 . - 0 ID=cds-WP_016191882.1;Parent=gene-LU604_RS16895;Dbxref=Genbank:WP_016191882.1;Name=WP_016191882.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014598157.1;locus_tag=LU604_RS16895;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_016191882.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3172876 3173856 . - . ID=gene-LU604_RS16900;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=LU604_RS16900;old_locus_tag=LU604_16900 NZ_CP089942.1 Protein Homology CDS 3172876 3173856 . - 0 ID=cds-WP_016191881.1;Parent=gene-LU604_RS16900;Dbxref=Genbank:WP_016191881.1;Name=WP_016191881.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201239.1;locus_tag=LU604_RS16900;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_016191881.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3173846 3174997 . - . ID=gene-LU604_RS16905;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=LU604_RS16905;old_locus_tag=LU604_16905 NZ_CP089942.1 Protein Homology CDS 3173846 3174997 . - 0 ID=cds-WP_233478840.1;Parent=gene-LU604_RS16905;Dbxref=Genbank:WP_233478840.1;Name=WP_233478840.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191880.1;locus_tag=LU604_RS16905;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_233478840.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3175913 3178018 . - . ID=gene-LU604_RS16910;Name=LU604_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16910;old_locus_tag=LU604_16910 NZ_CP089942.1 Protein Homology CDS 3175913 3178018 . - 0 ID=cds-WP_233480821.1;Parent=gene-LU604_RS16910;Dbxref=Genbank:WP_233480821.1;Name=WP_233480821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191879.1;locus_tag=LU604_RS16910;product=peptidase domain-containing ABC transporter;protein_id=WP_233480821.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3178026 3179306 . - . ID=gene-LU604_RS16915;Name=LU604_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16915;old_locus_tag=LU604_16915 NZ_CP089942.1 Protein Homology CDS 3178026 3179306 . - 0 ID=cds-WP_233478841.1;Parent=gene-LU604_RS16915;Dbxref=Genbank:WP_233478841.1;Name=WP_233478841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191878.1;locus_tag=LU604_RS16915;product=HlyD family secretion protein;protein_id=WP_233478841.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3179673 3179906 . - . ID=gene-LU604_RS16920;Name=LU604_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16920;old_locus_tag=LU604_16920 NZ_CP089942.1 GeneMarkS-2+ CDS 3179673 3179906 . - 0 ID=cds-WP_233478842.1;Parent=gene-LU604_RS16920;Dbxref=Genbank:WP_233478842.1;Name=WP_233478842.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16920;product=hypothetical protein;protein_id=WP_233478842.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3180810 3182007 . + . ID=gene-LU604_RS16925;Name=LU604_RS16925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16925;old_locus_tag=LU604_16925;pseudo=true NZ_CP089942.1 Protein Homology CDS 3180810 3182007 . + 0 ID=cds-LU604_RS16925;Parent=gene-LU604_RS16925;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS16925;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3182240 3182614 . + . ID=gene-LU604_RS16930;Name=LU604_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16930;old_locus_tag=LU604_16930 NZ_CP089942.1 GeneMarkS-2+ CDS 3182240 3182614 . + 0 ID=cds-WP_233478843.1;Parent=gene-LU604_RS16930;Dbxref=Genbank:WP_233478843.1;Name=WP_233478843.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16930;product=hypothetical protein;protein_id=WP_233478843.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3182746 3183885 . + . ID=gene-LU604_RS16935;Name=LU604_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16935;old_locus_tag=LU604_16935 NZ_CP089942.1 Protein Homology CDS 3182746 3183885 . + 0 ID=cds-WP_016191876.1;Parent=gene-LU604_RS16935;Dbxref=Genbank:WP_016191876.1;Name=WP_016191876.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799297.1;locus_tag=LU604_RS16935;product=iron-containing alcohol dehydrogenase;protein_id=WP_016191876.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3184035 3184190 . + . ID=gene-LU604_RS16940;Name=LU604_RS16940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS16940;old_locus_tag=LU604_16940;partial=true;pseudo=true;start_range=.,3184035 NZ_CP089942.1 Protein Homology CDS 3184035 3184190 . + 0 ID=cds-LU604_RS16940;Parent=gene-LU604_RS16940;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762717.1;locus_tag=LU604_RS16940;partial=true;product=short-chain dehydrogenase/reductase SDR;pseudo=true;start_range=.,3184035;transl_table=11 NZ_CP089942.1 RefSeq gene 3184307 3184525 . - . ID=gene-LU604_RS16945;Name=LU604_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16945;old_locus_tag=LU604_16945 NZ_CP089942.1 GeneMarkS-2+ CDS 3184307 3184525 . - 0 ID=cds-WP_233478844.1;Parent=gene-LU604_RS16945;Dbxref=Genbank:WP_233478844.1;Name=WP_233478844.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16945;product=hypothetical protein;protein_id=WP_233478844.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3184533 3184766 . - . ID=gene-LU604_RS16950;Name=LU604_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16950;old_locus_tag=LU604_16950 NZ_CP089942.1 GeneMarkS-2+ CDS 3184533 3184766 . - 0 ID=cds-WP_040465703.1;Parent=gene-LU604_RS16950;Dbxref=Genbank:WP_040465703.1;Name=WP_040465703.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16950;product=hypothetical protein;protein_id=WP_040465703.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3184753 3185322 . - . ID=gene-LU604_RS16955;Name=LU604_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16955;old_locus_tag=LU604_16955 NZ_CP089942.1 GeneMarkS-2+ CDS 3184753 3185322 . - 0 ID=cds-WP_233478845.1;Parent=gene-LU604_RS16955;Dbxref=Genbank:WP_233478845.1;Name=WP_233478845.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16955;product=hypothetical protein;protein_id=WP_233478845.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3185322 3185489 . - . ID=gene-LU604_RS16960;Name=LU604_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16960;old_locus_tag=LU604_16960 NZ_CP089942.1 GeneMarkS-2+ CDS 3185322 3185489 . - 0 ID=cds-WP_157275248.1;Parent=gene-LU604_RS16960;Dbxref=Genbank:WP_157275248.1;Name=WP_157275248.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16960;product=hypothetical protein;protein_id=WP_157275248.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3185551 3185745 . - . ID=gene-LU604_RS16965;Name=LU604_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16965;old_locus_tag=LU604_16965 NZ_CP089942.1 GeneMarkS-2+ CDS 3185551 3185745 . - 0 ID=cds-WP_016191873.1;Parent=gene-LU604_RS16965;Dbxref=Genbank:WP_016191873.1;Name=WP_016191873.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16965;product=hypothetical protein;protein_id=WP_016191873.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3185763 3186110 . - . ID=gene-LU604_RS16970;Name=LU604_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16970;old_locus_tag=LU604_16970 NZ_CP089942.1 Protein Homology CDS 3185763 3186110 . - 0 ID=cds-WP_233478846.1;Parent=gene-LU604_RS16970;Dbxref=Genbank:WP_233478846.1;Name=WP_233478846.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020345.2;locus_tag=LU604_RS16970;product=hypothetical protein;protein_id=WP_233478846.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3186088 3186522 . - . ID=gene-LU604_RS16975;Name=LU604_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16975;old_locus_tag=LU604_16975 NZ_CP089942.1 Protein Homology CDS 3186088 3186522 . - 0 ID=cds-WP_233481645.1;Parent=gene-LU604_RS16975;Dbxref=Genbank:WP_233481645.1;Name=WP_233481645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009112836.1;locus_tag=LU604_RS16975;product=regulatory protein GemA;protein_id=WP_233481645.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3186545 3186787 . - . ID=gene-LU604_RS16980;Name=LU604_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16980;old_locus_tag=LU604_16980 NZ_CP089942.1 GeneMarkS-2+ CDS 3186545 3186787 . - 0 ID=cds-WP_016191870.1;Parent=gene-LU604_RS16980;Dbxref=Genbank:WP_016191870.1;Name=WP_016191870.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16980;product=hypothetical protein;protein_id=WP_016191870.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3187062 3187202 . - . ID=gene-LU604_RS16985;Name=LU604_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16985;old_locus_tag=LU604_16985 NZ_CP089942.1 GeneMarkS-2+ CDS 3187062 3187202 . - 0 ID=cds-WP_157275247.1;Parent=gene-LU604_RS16985;Dbxref=Genbank:WP_157275247.1;Name=WP_157275247.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16985;product=hypothetical protein;protein_id=WP_157275247.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3187199 3187408 . - . ID=gene-LU604_RS16990;Name=LU604_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16990;old_locus_tag=LU604_16990 NZ_CP089942.1 GeneMarkS-2+ CDS 3187199 3187408 . - 0 ID=cds-WP_233478847.1;Parent=gene-LU604_RS16990;Dbxref=Genbank:WP_233478847.1;Name=WP_233478847.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS16990;product=hypothetical protein;protein_id=WP_233478847.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3188448 3189020 . - . ID=gene-LU604_RS16995;Name=LU604_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS16995;old_locus_tag=LU604_16995 NZ_CP089942.1 Protein Homology CDS 3188448 3189020 . - 0 ID=cds-WP_233480823.1;Parent=gene-LU604_RS16995;Dbxref=Genbank:WP_233480823.1;Name=WP_233480823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191867.1;locus_tag=LU604_RS16995;product=DUF3164 family protein;protein_id=WP_233480823.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3189070 3189234 . - . ID=gene-LU604_RS17000;Name=LU604_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17000;old_locus_tag=LU604_17000 NZ_CP089942.1 GeneMarkS-2+ CDS 3189070 3189234 . - 0 ID=cds-WP_157275246.1;Parent=gene-LU604_RS17000;Dbxref=Genbank:WP_157275246.1;Name=WP_157275246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS17000;product=hypothetical protein;protein_id=WP_157275246.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3189275 3189778 . - . ID=gene-LU604_RS17005;Name=LU604_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17005;old_locus_tag=LU604_17005 NZ_CP089942.1 Protein Homology CDS 3189275 3189778 . - 0 ID=cds-WP_233481343.1;Parent=gene-LU604_RS17005;Dbxref=Genbank:WP_233481343.1;Name=WP_233481343.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU604_RS17005;product=IS1 family transposase;protein_id=WP_233481343.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3189697 3189972 . - . ID=gene-LU604_RS17010;Name=LU604_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17010;old_locus_tag=LU604_17010 NZ_CP089942.1 Protein Homology CDS 3189697 3189972 . - 0 ID=cds-WP_072052792.1;Parent=gene-LU604_RS17010;Dbxref=Genbank:WP_072052792.1;Name=WP_072052792.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU604_RS17010;product=IS1-like element transposase;protein_id=WP_072052792.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3190288 3190410 . - . ID=gene-LU604_RS27015;Name=LU604_RS27015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27015 NZ_CP089942.1 GeneMarkS-2+ CDS 3190288 3190410 . - 0 ID=cds-WP_256371754.1;Parent=gene-LU604_RS27015;Dbxref=Genbank:WP_256371754.1;Name=WP_256371754.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS27015;product=hypothetical protein;protein_id=WP_256371754.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3190492 3190986 . - . ID=gene-LU604_RS17015;Name=LU604_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17015;old_locus_tag=LU604_17015 NZ_CP089942.1 Protein Homology CDS 3190492 3190986 . - 0 ID=cds-WP_040465700.1;Parent=gene-LU604_RS17015;Dbxref=Genbank:WP_040465700.1;Name=WP_040465700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017799358.1;locus_tag=LU604_RS17015;product=DUF1198 family protein;protein_id=WP_040465700.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3191219 3191389 . + . ID=gene-LU604_RS17020;Name=LU604_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17020;old_locus_tag=LU604_17020 NZ_CP089942.1 GeneMarkS-2+ CDS 3191219 3191389 . + 0 ID=cds-WP_157275245.1;Parent=gene-LU604_RS17020;Dbxref=Genbank:WP_157275245.1;Name=WP_157275245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS17020;product=hypothetical protein;protein_id=WP_157275245.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3191714 3192673 . - . ID=gene-LU604_RS17025;Name=LU604_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17025;old_locus_tag=LU604_17025 NZ_CP089942.1 Protein Homology CDS 3191714 3192673 . - 0 ID=cds-WP_016191864.1;Parent=gene-LU604_RS17025;Dbxref=Genbank:WP_016191864.1;Name=WP_016191864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201219.1;locus_tag=LU604_RS17025;product=chemotaxis protein;protein_id=WP_016191864.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3193208 3193543 . + . ID=gene-LU604_RS17030;Name=LU604_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17030;old_locus_tag=LU604_17030 NZ_CP089942.1 Protein Homology CDS 3193208 3193543 . + 0 ID=cds-WP_233480824.1;Parent=gene-LU604_RS17030;Dbxref=Genbank:WP_233480824.1;Name=WP_233480824.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016365.2;locus_tag=LU604_RS17030;product=DUF554 family protein;protein_id=WP_233480824.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3193581 3194678 . + . ID=gene-LU604_RS17035;Name=LU604_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17035;old_locus_tag=LU604_17035 NZ_CP089942.1 Protein Homology CDS 3193581 3194678 . + 0 ID=cds-WP_233480825.1;Parent=gene-LU604_RS17035;Dbxref=Genbank:WP_233480825.1;Name=WP_233480825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323000.1;locus_tag=LU604_RS17035;product=site-specific integrase;protein_id=WP_233480825.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3194749 3195063 . + . ID=gene-LU604_RS17040;Name=LU604_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17040;old_locus_tag=LU604_17040 NZ_CP089942.1 Protein Homology CDS 3194749 3195063 . + 0 ID=cds-WP_233478850.1;Parent=gene-LU604_RS17040;Dbxref=Genbank:WP_233478850.1;Name=WP_233478850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191863.1;locus_tag=LU604_RS17040;product=hypothetical protein;protein_id=WP_233478850.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3195089 3195499 . + . ID=gene-LU604_RS17045;Name=LU604_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17045;old_locus_tag=LU604_17045 NZ_CP089942.1 Protein Homology CDS 3195089 3195499 . + 0 ID=cds-WP_233478851.1;Parent=gene-LU604_RS17045;Dbxref=Genbank:WP_233478851.1;Name=WP_233478851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191862.1;locus_tag=LU604_RS17045;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_233478851.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3195537 3196463 . - . ID=gene-LU604_RS17050;Name=LU604_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17050;old_locus_tag=LU604_17050 NZ_CP089942.1 Protein Homology CDS 3195537 3196463 . - 0 ID=cds-WP_233478852.1;Parent=gene-LU604_RS17050;Dbxref=Genbank:WP_233478852.1;Name=WP_233478852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191861.1;locus_tag=LU604_RS17050;product=glycosyltransferase family 9 protein;protein_id=WP_233478852.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3196526 3197223 . - . ID=gene-LU604_RS17055;Name=LU604_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17055;old_locus_tag=LU604_17055 NZ_CP089942.1 Protein Homology CDS 3196974 3197223 . - 0 ID=cds-WP_233478853.1;Parent=gene-LU604_RS17055;Dbxref=Genbank:WP_233478853.1;Name=WP_233478853.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS17055;product=IS1 family transposase;protein_id=WP_233478853.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 3196526 3196974 . - 2 ID=cds-WP_233478853.1;Parent=gene-LU604_RS17055;Dbxref=Genbank:WP_233478853.1;Name=WP_233478853.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS17055;product=IS1 family transposase;protein_id=WP_233478853.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3197327 3197689 . + . ID=gene-LU604_RS17060;Name=LU604_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17060;old_locus_tag=LU604_17060 NZ_CP089942.1 Protein Homology CDS 3197327 3197689 . + 0 ID=cds-WP_046371800.1;Parent=gene-LU604_RS17060;Dbxref=Genbank:WP_046371800.1;Name=WP_046371800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006326678.1;locus_tag=LU604_RS17060;product=hypothetical protein;protein_id=WP_046371800.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3197725 3198117 . + . ID=gene-LU604_RS17065;Name=LU604_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17065;old_locus_tag=LU604_17065 NZ_CP089942.1 Protein Homology CDS 3197725 3198117 . + 0 ID=cds-WP_233478854.1;Parent=gene-LU604_RS17065;Dbxref=Genbank:WP_233478854.1;Name=WP_233478854.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021574.2;locus_tag=LU604_RS17065;product=DUF2303 family protein;protein_id=WP_233478854.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3198219 3199339 . + . ID=gene-LU604_RS17070;Name=LU604_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17070;old_locus_tag=LU604_17070 NZ_CP089942.1 Protein Homology CDS 3198219 3198477 . + 0 ID=cds-WP_233481344.1;Parent=gene-LU604_RS17070;Dbxref=Genbank:WP_233481344.1;Name=WP_233481344.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS17070;product=IS3 family transposase;protein_id=WP_233481344.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 3198477 3199339 . + 2 ID=cds-WP_233481344.1;Parent=gene-LU604_RS17070;Dbxref=Genbank:WP_233481344.1;Name=WP_233481344.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS17070;product=IS3 family transposase;protein_id=WP_233481344.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3199400 3200190 . + . ID=gene-LU604_RS17075;Name=LU604_RS17075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17075;old_locus_tag=LU604_17075;pseudo=true NZ_CP089942.1 Protein Homology CDS 3199400 3200190 . + 0 ID=cds-LU604_RS17075;Parent=gene-LU604_RS17075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001139550.1;locus_tag=LU604_RS17075;product=DNA-binding protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3200187 3200420 . + . ID=gene-LU604_RS17080;Name=LU604_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17080;old_locus_tag=LU604_17080 NZ_CP089942.1 Protein Homology CDS 3200187 3200420 . + 0 ID=cds-WP_016191859.1;Parent=gene-LU604_RS17080;Dbxref=Genbank:WP_016191859.1;Name=WP_016191859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009112585.1;locus_tag=LU604_RS17080;product=hypothetical protein;protein_id=WP_016191859.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3200505 3200750 . + . ID=gene-LU604_RS17085;Name=LU604_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17085;old_locus_tag=LU604_17085 NZ_CP089942.1 Protein Homology CDS 3200505 3200750 . + 0 ID=cds-WP_233478856.1;Parent=gene-LU604_RS17085;Dbxref=Genbank:WP_233478856.1;Name=WP_233478856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004956582.1;locus_tag=LU604_RS17085;product=hypothetical protein;protein_id=WP_233478856.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3200819 3201067 . + . ID=gene-LU604_RS17090;Name=LU604_RS17090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17090;old_locus_tag=LU604_17090;partial=true;pseudo=true;start_range=.,3200819 NZ_CP089942.1 Protein Homology CDS 3200819 3201067 . + 0 ID=cds-LU604_RS17090;Parent=gene-LU604_RS17090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000664373.1;locus_tag=LU604_RS17090;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3200819;transl_table=11 NZ_CP089942.1 RefSeq gene 3201064 3201291 . + . ID=gene-LU604_RS17095;Name=LU604_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17095;old_locus_tag=LU604_17095 NZ_CP089942.1 Protein Homology CDS 3201064 3201291 . + 0 ID=cds-WP_016191856.1;Parent=gene-LU604_RS17095;Dbxref=Genbank:WP_016191856.1;Name=WP_016191856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660853.1;locus_tag=LU604_RS17095;product=hypothetical protein;protein_id=WP_016191856.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3201273 3201866 . + . ID=gene-LU604_RS17100;Name=LU604_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17100;old_locus_tag=LU604_17100 NZ_CP089942.1 Protein Homology CDS 3201273 3201866 . + 0 ID=cds-WP_233478857.1;Parent=gene-LU604_RS17100;Dbxref=Genbank:WP_233478857.1;Name=WP_233478857.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024784.2;locus_tag=LU604_RS17100;product=HNH endonuclease signature motif containing protein;protein_id=WP_233478857.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3201863 3202288 . + . ID=gene-LU604_RS17105;Name=LU604_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17105;old_locus_tag=LU604_17105 NZ_CP089942.1 GeneMarkS-2+ CDS 3201863 3202288 . + 0 ID=cds-WP_233478858.1;Parent=gene-LU604_RS17105;Dbxref=Genbank:WP_233478858.1;Name=WP_233478858.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS17105;product=hypothetical protein;protein_id=WP_233478858.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3202289 3202519 . + . ID=gene-LU604_RS17110;Name=LU604_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17110;old_locus_tag=LU604_17110 NZ_CP089942.1 Protein Homology CDS 3202289 3202519 . + 0 ID=cds-WP_233478859.1;Parent=gene-LU604_RS17110;Dbxref=Genbank:WP_233478859.1;Name=WP_233478859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191853.1;locus_tag=LU604_RS17110;product=DUF4060 family protein;protein_id=WP_233478859.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3202539 3203108 . + . ID=gene-LU604_RS17115;Name=LU604_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17115;old_locus_tag=LU604_17115 NZ_CP089942.1 Protein Homology CDS 3202539 3203108 . + 0 ID=cds-WP_233478860.1;Parent=gene-LU604_RS17115;Dbxref=Genbank:WP_233478860.1;Name=WP_233478860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009008283.1;locus_tag=LU604_RS17115;product=3'-5' exonuclease;protein_id=WP_233478860.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3203133 3203744 . + . ID=gene-LU604_RS17120;Name=LU604_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17120;old_locus_tag=LU604_17120 NZ_CP089942.1 Protein Homology CDS 3203133 3203744 . + 0 ID=cds-WP_233478861.1;Parent=gene-LU604_RS17120;Dbxref=Genbank:WP_233478861.1;Name=WP_233478861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144297.1;locus_tag=LU604_RS17120;product=MT-A70 family methyltransferase;protein_id=WP_233478861.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3203710 3203961 . + . ID=gene-LU604_RS17125;Name=LU604_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17125;old_locus_tag=LU604_17125 NZ_CP089942.1 Protein Homology CDS 3203710 3203961 . + 0 ID=cds-WP_233478862.1;Parent=gene-LU604_RS17125;Dbxref=Genbank:WP_233478862.1;Name=WP_233478862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619014.1;locus_tag=LU604_RS17125;product=pyocin activator PrtN family protein;protein_id=WP_233478862.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3204205 3204354 . + . ID=gene-LU604_RS17130;Name=LU604_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17130;old_locus_tag=LU604_17130 NZ_CP089942.1 Protein Homology CDS 3204205 3204354 . + 0 ID=cds-WP_233478863.1;Parent=gene-LU604_RS17130;Dbxref=Genbank:WP_233478863.1;Name=WP_233478863.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000809168.1;locus_tag=LU604_RS17130;product=Hok/Gef family protein;protein_id=WP_233478863.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3204577 3205617 . + . ID=gene-LU604_RS17135;Name=LU604_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17135;old_locus_tag=LU604_17135 NZ_CP089942.1 Protein Homology CDS 3204577 3205617 . + 0 ID=cds-WP_046371813.1-3;Parent=gene-LU604_RS17135;Dbxref=Genbank:WP_046371813.1;Name=WP_046371813.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS17135;product=IS481 family transposase;protein_id=WP_046371813.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3205738 3205827 . + . ID=gene-LU604_RS17140;Name=LU604_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17140;old_locus_tag=LU604_17140 NZ_CP089942.1 Protein Homology CDS 3205738 3205827 . + 0 ID=cds-WP_233480826.1;Parent=gene-LU604_RS17140;Dbxref=Genbank:WP_233480826.1;Name=WP_233480826.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016365.2;locus_tag=LU604_RS17140;product=hypothetical protein;protein_id=WP_233480826.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3205859 3206556 . + . ID=gene-LU604_RS17145;Name=LU604_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17145;old_locus_tag=LU604_17145 NZ_CP089942.1 Protein Homology CDS 3205859 3206108 . + 0 ID=cds-WP_233478864.1;Parent=gene-LU604_RS17145;Dbxref=Genbank:WP_233478864.1;Name=WP_233478864.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS17145;product=IS1 family transposase;protein_id=WP_233478864.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 3206108 3206556 . + 2 ID=cds-WP_233478864.1;Parent=gene-LU604_RS17145;Dbxref=Genbank:WP_233478864.1;Name=WP_233478864.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS17145;product=IS1 family transposase;protein_id=WP_233478864.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3206775 3207318 . + . ID=gene-LU604_RS17150;Name=LU604_RS17150;end_range=3207318,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17150;old_locus_tag=LU604_17150;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3206775 3207318 . + 0 ID=cds-LU604_RS17150;Parent=gene-LU604_RS17150;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3207318,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001179707.1;locus_tag=LU604_RS17150;partial=true;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3207319 3207431 . - . ID=gene-LU604_RS17155;Name=LU604_RS17155;end_range=3207431,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17155;old_locus_tag=LU604_17155;partial=true;pseudo=true;start_range=.,3207319 NZ_CP089942.1 Protein Homology CDS 3207319 3207431 . - 0 ID=cds-LU604_RS17155;Parent=gene-LU604_RS17155;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3207431,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS17155;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,3207319;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3207438 3207625 . + . ID=gene-LU604_RS17160;Name=LU604_RS17160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17160;old_locus_tag=LU604_17160;partial=true;pseudo=true;start_range=.,3207438 NZ_CP089942.1 Protein Homology CDS 3207438 3207625 . + 0 ID=cds-LU604_RS17160;Parent=gene-LU604_RS17160;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343760.1;locus_tag=LU604_RS17160;partial=true;product=transposase;pseudo=true;start_range=.,3207438;transl_table=11 NZ_CP089942.1 RefSeq gene 3207871 3207969 . + . ID=gene-LU604_RS17165;Name=LU604_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17165;old_locus_tag=LU604_17165 NZ_CP089942.1 Protein Homology CDS 3207871 3207969 . + 0 ID=cds-WP_152664136.1;Parent=gene-LU604_RS17165;Dbxref=Genbank:WP_152664136.1;Name=WP_152664136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008925225.1;locus_tag=LU604_RS17165;product=YoaK family small membrane protein;protein_id=WP_152664136.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3208022 3208591 . - . ID=gene-LU604_RS17170;Name=LU604_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17170;old_locus_tag=LU604_17170 NZ_CP089942.1 Protein Homology CDS 3208022 3208591 . - 0 ID=cds-WP_233478865.1;Parent=gene-LU604_RS17170;Dbxref=Genbank:WP_233478865.1;Name=WP_233478865.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS17170;product=transposase;protein_id=WP_233478865.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3209118 3209507 . + . ID=gene-LU604_RS17175;Name=LU604_RS17175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17175;old_locus_tag=LU604_17175;pseudo=true NZ_CP089942.1 Protein Homology CDS 3209118 3209507 . + 0 ID=cds-LU604_RS17175;Parent=gene-LU604_RS17175;Note=internal stop;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014654019.1;locus_tag=LU604_RS17175;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3209836 3210665 . + . ID=gene-LU604_RS17180;Name=LU604_RS17180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17180;old_locus_tag=LU604_17180;pseudo=true NZ_CP089942.1 Protein Homology CDS 3209836 3210665 . + 0 ID=cds-LU604_RS17180;Parent=gene-LU604_RS17180;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917256.1;locus_tag=LU604_RS17180;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3210798 3211648 . + . ID=gene-LU604_RS17185;Name=LU604_RS17185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17185;old_locus_tag=LU604_17185;pseudo=true NZ_CP089942.1 Protein Homology CDS 3210798 3211648 . + 0 ID=cds-LU604_RS17185;Parent=gene-LU604_RS17185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295328.1;locus_tag=LU604_RS17185;product=nucleoside-specific channel-forming protein Tsx;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3211778 3212197 . - . ID=gene-LU604_RS17190;Name=LU604_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17190;old_locus_tag=LU604_17190 NZ_CP089942.1 Protein Homology CDS 3211778 3212197 . - 0 ID=cds-WP_233478866.1;Parent=gene-LU604_RS17190;Dbxref=Genbank:WP_233478866.1;Name=WP_233478866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191847.1;locus_tag=LU604_RS17190;product=hypothetical protein;protein_id=WP_233478866.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3212305 3213225 . - . ID=gene-LU604_RS17195;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=pseudogene;locus_tag=LU604_RS17195;old_locus_tag=LU604_17195;pseudo=true NZ_CP089942.1 Protein Homology CDS 3212305 3213225 . - 0 ID=cds-LU604_RS17195;Parent=gene-LU604_RS17195;Note=frameshifted;Ontology_term=GO:0009086,GO:0047150;gbkey=CDS;gene=mmuM;go_function=betaine-homocysteine S-methyltransferase activity|0047150||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203452.1;locus_tag=LU604_RS17195;product=homocysteine S-methyltransferase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3213233 3214621 . - . ID=gene-LU604_RS17200;Name=mmuP;gbkey=Gene;gene=mmuP;gene_biotype=pseudogene;locus_tag=LU604_RS17200;old_locus_tag=LU604_17200;pseudo=true NZ_CP089942.1 Protein Homology CDS 3213233 3214621 . - 0 ID=cds-LU604_RS17200;Parent=gene-LU604_RS17200;Note=internal stop;Ontology_term=GO:0055085;gbkey=CDS;gene=mmuP;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203453.1;locus_tag=LU604_RS17200;product=S-methylmethionine permease;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3214778 3215114 . - . ID=gene-LU604_RS17205;Name=LU604_RS17205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17205;old_locus_tag=LU604_17205;pseudo=true NZ_CP089942.1 Protein Homology CDS 3214778 3215114 . - 0 ID=cds-LU604_RS17205;Parent=gene-LU604_RS17205;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191844.1;locus_tag=LU604_RS17205;product=DUF2002 family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3215276 3215599 . + . ID=gene-LU604_RS17210;Name=LU604_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17210;old_locus_tag=LU604_17210 NZ_CP089942.1 Protein Homology CDS 3215276 3215599 . + 0 ID=cds-WP_016191843.1;Parent=gene-LU604_RS17210;Dbxref=Genbank:WP_016191843.1;Name=WP_016191843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203455.1;locus_tag=LU604_RS17210;product=DUF883 family protein;protein_id=WP_016191843.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3215853 3216095 . + . ID=gene-LU604_RS17215;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=LU604_RS17215;old_locus_tag=LU604_17215 NZ_CP089942.1 Protein Homology CDS 3215853 3216095 . + 0 ID=cds-WP_233478867.1;Parent=gene-LU604_RS17215;Dbxref=Genbank:WP_233478867.1;Name=WP_233478867.1;Ontology_term=GO:0097573;gbkey=CDS;gene=nrdH;go_function=glutathione oxidoreductase activity|0097573||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170573.1;locus_tag=LU604_RS17215;product=glutaredoxin-like protein NrdH;protein_id=WP_233478867.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3216101 3216517 . + . ID=gene-LU604_RS17220;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=LU604_RS17220;old_locus_tag=LU604_17220 NZ_CP089942.1 Protein Homology CDS 3216101 3216517 . + 0 ID=cds-WP_016191841.1;Parent=gene-LU604_RS17220;Dbxref=Genbank:WP_016191841.1;Name=WP_016191841.1;Ontology_term=GO:0009263;gbkey=CDS;gene=nrdI;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170575.1;locus_tag=LU604_RS17220;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_016191841.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3216547 3218628 . + . ID=gene-LU604_RS17225;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=LU604_RS17225;old_locus_tag=LU604_17225 NZ_CP089942.1 Protein Homology CDS 3216547 3218628 . + 0 ID=cds-WP_233480827.1;Parent=gene-LU604_RS17225;Dbxref=Genbank:WP_233480827.1;Name=WP_233480827.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708489.2;locus_tag=LU604_RS17225;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_233480827.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3218673 3219632 . + . ID=gene-LU604_RS17230;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=LU604_RS17230;old_locus_tag=LU604_17230 NZ_CP089942.1 Protein Homology CDS 3218673 3219632 . + 0 ID=cds-WP_233480828.1;Parent=gene-LU604_RS17230;Dbxref=Genbank:WP_233480828.1;Name=WP_233480828.1;Ontology_term=GO:0009265,GO:0004748,GO:0030145,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,manganese ion binding|0030145||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382773.1;locus_tag=LU604_RS17230;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_233480828.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3220010 3221209 . + . ID=gene-LU604_RS17235;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=LU604_RS17235;old_locus_tag=LU604_17235 NZ_CP089942.1 Protein Homology CDS 3220010 3221209 . + 0 ID=cds-WP_016191838.1;Parent=gene-LU604_RS17235;Dbxref=Genbank:WP_016191838.1;Name=WP_016191838.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106308.1;locus_tag=LU604_RS17235;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_016191838.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3221202 3222365 . + . ID=gene-LU604_RS17240;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=LU604_RS17240;old_locus_tag=LU604_17240 NZ_CP089942.1 Protein Homology CDS 3221202 3222365 . + 0 ID=cds-WP_016191837.1;Parent=gene-LU604_RS17240;Dbxref=Genbank:WP_016191837.1;Name=WP_016191837.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440682.1;locus_tag=LU604_RS17240;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_016191837.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3222435 3223430 . + . ID=gene-LU604_RS17245;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=LU604_RS17245;old_locus_tag=LU604_17245 NZ_CP089942.1 Protein Homology CDS 3222435 3223430 . + 0 ID=cds-WP_233478868.1;Parent=gene-LU604_RS17245;Dbxref=Genbank:WP_233478868.1;Name=WP_233478868.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226500.1;locus_tag=LU604_RS17245;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_233478868.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3224254 3224784 . + . ID=gene-LU604_RS17250;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=LU604_RS17250;old_locus_tag=LU604_17250 NZ_CP089942.1 Protein Homology CDS 3224254 3224784 . + 0 ID=cds-WP_016191835.1;Parent=gene-LU604_RS17250;Dbxref=Genbank:WP_016191835.1;Name=WP_016191835.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228387.1;locus_tag=LU604_RS17250;product=transcriptional repressor MprA;protein_id=WP_016191835.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3224927 3225448 . + . ID=gene-LU604_RS17255;Name=LU604_RS17255;end_range=3225448,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17255;old_locus_tag=LU604_17255;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3224927 3225448 . + 0 ID=cds-LU604_RS17255;Parent=gene-LU604_RS17255;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3225448,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803083.1;locus_tag=LU604_RS17255;partial=true;product=biotin/lipoyl-binding protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3225543 3225698 . + . ID=gene-LU604_RS17260;Name=LU604_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17260;old_locus_tag=LU604_17260 NZ_CP089942.1 GeneMarkS-2+ CDS 3225543 3225698 . + 0 ID=cds-WP_233481345.1;Parent=gene-LU604_RS17260;Dbxref=Genbank:WP_233481345.1;Name=WP_233481345.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS17260;product=hypothetical protein;protein_id=WP_233481345.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3225762 3226766 . + . ID=gene-LU604_RS17265;Name=LU604_RS17265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17265;old_locus_tag=LU604_17265;partial=true;pseudo=true;start_range=.,3225762 NZ_CP089942.1 Protein Homology CDS 3225762 3226766 . + 0 ID=cds-LU604_RS17265;Parent=gene-LU604_RS17265;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU604_RS17265;partial=true;product=IS91 family transposase;pseudo=true;start_range=.,3225762;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3227074 3227268 . + . ID=gene-LU604_RS17270;Name=LU604_RS17270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17270;old_locus_tag=LU604_17270;partial=true;pseudo=true;start_range=.,3227074 NZ_CP089942.1 Protein Homology CDS 3227074 3227268 . + 0 ID=cds-LU604_RS17270;Parent=gene-LU604_RS17270;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019845218.1;locus_tag=LU604_RS17270;partial=true;product=MFS transporter;pseudo=true;start_range=.,3227074;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3227373 3228391 . + . ID=gene-LU604_RS17275;Name=LU604_RS17275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17275;old_locus_tag=LU604_17275;pseudo=true NZ_CP089942.1 Protein Homology CDS 3227373 3228391 . + 0 ID=cds-LU604_RS17275;Parent=gene-LU604_RS17275;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS17275;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3228544 3229741 . - . ID=gene-LU604_RS17280;Name=LU604_RS17280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17280;old_locus_tag=LU604_17280;pseudo=true NZ_CP089942.1 Protein Homology CDS 3228544 3229741 . - 0 ID=cds-LU604_RS17280;Parent=gene-LU604_RS17280;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS17280;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3229878 3230333 . - . ID=gene-LU604_RS17285;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS17285;old_locus_tag=LU604_17285;pseudo=true NZ_CP089942.1 Protein Homology CDS 3229878 3230333 . - 0 ID=cds-LU604_RS17285;Parent=gene-LU604_RS17285;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=LU604_RS17285;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3230498 3231529 . - . ID=gene-LU604_RS17290;Name=LU604_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17290;old_locus_tag=LU604_17290 NZ_CP089942.1 Protein Homology CDS 3230498 3231529 . - 0 ID=cds-WP_016191828.1;Parent=gene-LU604_RS17290;Dbxref=Genbank:WP_016191828.1;Name=WP_016191828.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004162911.1;locus_tag=LU604_RS17290;product=tRNA/rRNA methyltransferase;protein_id=WP_016191828.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3231773 3232192 . + . ID=gene-LU604_RS17295;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=LU604_RS17295;old_locus_tag=LU604_17295 NZ_CP089942.1 Protein Homology CDS 3231773 3232192 . + 0 ID=cds-WP_016191827.1;Parent=gene-LU604_RS17295;Dbxref=Genbank:WP_016191827.1;Name=WP_016191827.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358802.1;locus_tag=LU604_RS17295;product=thioredoxin TrxC;protein_id=WP_016191827.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3232274 3232475 . + . ID=gene-LU604_RS17300;Name=LU604_RS17300;end_range=3232475,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17300;old_locus_tag=LU604_17300;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3232274 3232475 . + 0 ID=cds-LU604_RS17300;Parent=gene-LU604_RS17300;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3232475,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001300438.1;locus_tag=LU604_RS17300;partial=true;product=DTW domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3232607 3232855 . + . ID=gene-LU604_RS17305;Name=LU604_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17305;old_locus_tag=LU604_17305 NZ_CP089942.1 Protein Homology CDS 3232607 3232855 . + 0 ID=cds-WP_071598930.1;Parent=gene-LU604_RS17305;Dbxref=Genbank:WP_071598930.1;Name=WP_071598930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707455.1;locus_tag=LU604_RS17305;product=hypothetical protein;protein_id=WP_071598930.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3232789 3233883 . + . ID=gene-LU604_RS17310;Name=LU604_RS17310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17310;old_locus_tag=LU604_17310;pseudo=true NZ_CP089942.1 Protein Homology CDS 3232789 3233883 . + 0 ID=cds-LU604_RS17310;Parent=gene-LU604_RS17310;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558175.1;locus_tag=LU604_RS17310;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3234116 3234538 . - . ID=gene-LU604_RS17315;Name=LU604_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17315;old_locus_tag=LU604_17315 NZ_CP089942.1 Protein Homology CDS 3234116 3234538 . - 0 ID=cds-WP_016191820.1;Parent=gene-LU604_RS17315;Dbxref=Genbank:WP_016191820.1;Name=WP_016191820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017798969.1;locus_tag=LU604_RS17315;product=hypothetical protein;protein_id=WP_016191820.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3234531 3235232 . - . ID=gene-LU604_RS17320;Name=LU604_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17320;old_locus_tag=LU604_17320 NZ_CP089942.1 Protein Homology CDS 3234531 3235232 . - 0 ID=cds-WP_016191819.1;Parent=gene-LU604_RS17320;Dbxref=Genbank:WP_016191819.1;Name=WP_016191819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015670639.1;locus_tag=LU604_RS17320;product=hypothetical protein;protein_id=WP_016191819.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3235470 3235718 . + . ID=gene-LU604_RS17325;Name=LU604_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17325;old_locus_tag=LU604_17325 NZ_CP089942.1 Protein Homology CDS 3235470 3235718 . + 0 ID=cds-WP_071598930.1-2;Parent=gene-LU604_RS17325;Dbxref=Genbank:WP_071598930.1;Name=WP_071598930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707455.1;locus_tag=LU604_RS17325;product=hypothetical protein;protein_id=WP_071598930.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3235652 3236746 . + . ID=gene-LU604_RS17330;Name=LU604_RS17330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17330;old_locus_tag=LU604_17330;pseudo=true NZ_CP089942.1 Protein Homology CDS 3235652 3236746 . + 0 ID=cds-LU604_RS17330;Parent=gene-LU604_RS17330;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558175.1;locus_tag=LU604_RS17330;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3237499 3238196 . + . ID=gene-LU604_RS17335;Name=LU604_RS17335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17335;old_locus_tag=LU604_17335;pseudo=true NZ_CP089942.1 Protein Homology CDS 3237499 3238196 . + 0 ID=cds-LU604_RS17335;Parent=gene-LU604_RS17335;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU604_RS17335;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3238430 3241087 . + . ID=gene-LU604_RS17340;Name=LU604_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17340;old_locus_tag=LU604_17340 NZ_CP089942.1 Protein Homology CDS 3238430 3241087 . + 0 ID=cds-WP_233478870.1;Parent=gene-LU604_RS17340;Dbxref=Genbank:WP_233478870.1;Name=WP_233478870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000082639.1;locus_tag=LU604_RS17340;product=bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase;protein_id=WP_233478870.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3241187 3242542 . + . ID=gene-LU604_RS17345;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=LU604_RS17345;old_locus_tag=LU604_17345 NZ_CP089942.1 Protein Homology CDS 3241187 3242542 . + 0 ID=cds-WP_233478871.1;Parent=gene-LU604_RS17345;Dbxref=Genbank:WP_233478871.1;Name=WP_233478871.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120692.1;locus_tag=LU604_RS17345;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_233478871.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3242811 3243509 . + . ID=gene-LU604_RS17350;Name=LU604_RS17350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17350;old_locus_tag=LU604_17350;pseudo=true NZ_CP089942.1 Protein Homology CDS 3242811 3243509 . + 0 ID=cds-LU604_RS17350;Parent=gene-LU604_RS17350;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=LU604_RS17350;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3243745 3246330 . - . ID=gene-LU604_RS17355;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=LU604_RS17355;old_locus_tag=LU604_17355 NZ_CP089942.1 Protein Homology CDS 3243745 3246330 . - 0 ID=cds-WP_233478872.1;Parent=gene-LU604_RS17355;Dbxref=Genbank:WP_233478872.1;Name=WP_233478872.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817507.1;locus_tag=LU604_RS17355;product=ATP-dependent chaperone ClpB;protein_id=WP_233478872.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3246444 3247172 . - . ID=gene-LU604_RS17360;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=LU604_RS17360;old_locus_tag=LU604_17360 NZ_CP089942.1 Protein Homology CDS 3246444 3247172 . - 0 ID=cds-WP_040465693.1;Parent=gene-LU604_RS17360;Dbxref=Genbank:WP_040465693.1;Name=WP_040465693.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669015.1;locus_tag=LU604_RS17360;product=purine nucleoside phosphorylase YfiH;protein_id=WP_040465693.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3247172 3248149 . - . ID=gene-LU604_RS17365;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=LU604_RS17365;old_locus_tag=LU604_17365 NZ_CP089942.1 Protein Homology CDS 3247172 3248149 . - 0 ID=cds-WP_016191813.1;Parent=gene-LU604_RS17365;Dbxref=Genbank:WP_016191813.1;Name=WP_016191813.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016603421.1;locus_tag=LU604_RS17365;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_016191813.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3248281 3249012 . + . ID=gene-LU604_RS17370;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=LU604_RS17370;old_locus_tag=LU604_17370 NZ_CP089942.1 Protein Homology CDS 3248281 3249012 . + 0 ID=cds-WP_233480829.1;Parent=gene-LU604_RS17370;Dbxref=Genbank:WP_233480829.1;Name=WP_233480829.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543493.1;locus_tag=LU604_RS17370;product=outer membrane protein assembly factor BamD;protein_id=WP_233480829.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3249334 3249675 . + . ID=gene-LU604_RS17375;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=LU604_RS17375;old_locus_tag=LU604_17375 NZ_CP089942.1 Protein Homology CDS 3249334 3249675 . + 0 ID=cds-WP_016191811.1;Parent=gene-LU604_RS17375;Dbxref=Genbank:WP_016191811.1;Name=WP_016191811.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849030.1;locus_tag=LU604_RS17375;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_016191811.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3250258 3251418 . + . ID=gene-LU604_RS17380;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=LU604_RS17380;old_locus_tag=LU604_17380 NZ_CP089942.1 Protein Homology CDS 3250258 3251418 . + 0 ID=cds-WP_233478874.1;Parent=gene-LU604_RS17380;Dbxref=Genbank:WP_233478874.1;Name=WP_233478874.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191810.1;locus_tag=LU604_RS17380;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_233478874.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3251597 3251980 . - . ID=gene-LU604_RS17385;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=LU604_RS17385;old_locus_tag=LU604_17385 NZ_CP089942.1 Protein Homology CDS 3251597 3251980 . - 0 ID=cds-WP_016191809.1;Parent=gene-LU604_RS17385;Dbxref=Genbank:WP_016191809.1;Name=WP_016191809.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=LU604_RS17385;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_016191809.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3252265 3252942 . + . ID=gene-LU604_RS17390;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=LU604_RS17390;old_locus_tag=LU604_17390 NZ_CP089942.1 Protein Homology CDS 3252265 3252942 . + 0 ID=cds-WP_016191808.1;Parent=gene-LU604_RS17390;Dbxref=Genbank:WP_016191808.1;Name=WP_016191808.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159210.1;locus_tag=LU604_RS17390;product=uracil-DNA glycosylase;protein_id=WP_016191808.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3253029 3253610 . - . ID=gene-LU604_RS17395;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=LU604_RS17395;old_locus_tag=LU604_17395 NZ_CP089942.1 Protein Homology CDS 3253029 3253610 . - 0 ID=cds-WP_233478875.1;Parent=gene-LU604_RS17395;Dbxref=Genbank:WP_233478875.1;Name=WP_233478875.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168136.1;locus_tag=LU604_RS17395;product=nucleotide exchange factor GrpE;protein_id=WP_233478875.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3253736 3254614 . + . ID=gene-LU604_RS17400;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=LU604_RS17400;old_locus_tag=LU604_17400 NZ_CP089942.1 Protein Homology CDS 3253736 3254614 . + 0 ID=cds-WP_233478876.1;Parent=gene-LU604_RS17400;Dbxref=Genbank:WP_233478876.1;Name=WP_233478876.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=LU604_RS17400;product=NAD(+) kinase;protein_id=WP_233478876.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3254702 3256363 . + . ID=gene-LU604_RS17405;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=LU604_RS17405;old_locus_tag=LU604_17405 NZ_CP089942.1 Protein Homology CDS 3254702 3256363 . + 0 ID=cds-WP_233478877.1;Parent=gene-LU604_RS17405;Dbxref=Genbank:WP_233478877.1;Name=WP_233478877.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594347.1;locus_tag=LU604_RS17405;product=DNA repair protein RecN;protein_id=WP_233478877.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3256515 3256862 . + . ID=gene-LU604_RS17410;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=LU604_RS17410;old_locus_tag=LU604_17410 NZ_CP089942.1 Protein Homology CDS 3256515 3256862 . + 0 ID=cds-WP_233478878.1;Parent=gene-LU604_RS17410;Dbxref=Genbank:WP_233478878.1;Name=WP_233478878.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191804.1;locus_tag=LU604_RS17410;product=outer membrane protein assembly factor BamE;protein_id=WP_233478878.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3256935 3257852 . - . ID=gene-LU604_RS17415;Name=LU604_RS17415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17415;old_locus_tag=LU604_17415;pseudo=true NZ_CP089942.1 Protein Homology CDS 3256935 3257852 . - 0 ID=cds-LU604_RS17415;Parent=gene-LU604_RS17415;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011497995.1;locus_tag=LU604_RS17415;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3257905 3259025 . + . ID=gene-LU604_RS17420;Name=LU604_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17420;old_locus_tag=LU604_17420 NZ_CP089942.1 Protein Homology CDS 3257905 3258163 . + 0 ID=cds-WP_233478879.1;Parent=gene-LU604_RS17420;Dbxref=Genbank:WP_233478879.1;Name=WP_233478879.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS17420;product=IS3 family transposase;protein_id=WP_233478879.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 3258163 3259025 . + 2 ID=cds-WP_233478879.1;Parent=gene-LU604_RS17420;Dbxref=Genbank:WP_233478879.1;Name=WP_233478879.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS17420;product=IS3 family transposase;protein_id=WP_233478879.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3259066 3259200 . - . ID=gene-LU604_RS17425;Name=LU604_RS17425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17425;old_locus_tag=LU604_17425;partial=true;pseudo=true;start_range=.,3259066 NZ_CP089942.1 Protein Homology CDS 3259066 3259200 . - 0 ID=cds-LU604_RS17425;Parent=gene-LU604_RS17425;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011150324.1;locus_tag=LU604_RS17425;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,3259066;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3259371 3259811 . - . ID=gene-LU604_RS17430;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS17430;old_locus_tag=LU604_17430;partial=true;pseudo=true;start_range=.,3259371 NZ_CP089942.1 Protein Homology CDS 3259371 3259811 . - 0 ID=cds-LU604_RS17430;Parent=gene-LU604_RS17430;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000525033.1;locus_tag=LU604_RS17430;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,3259371;transl_table=11 NZ_CP089942.1 RefSeq gene 3259955 3260242 . - . ID=gene-LU604_RS17435;Name=LU604_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17435;old_locus_tag=LU604_17435 NZ_CP089942.1 Protein Homology CDS 3259955 3260242 . - 0 ID=cds-WP_016191801.1;Parent=gene-LU604_RS17435;Dbxref=Genbank:WP_016191801.1;Name=WP_016191801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014541967.1;locus_tag=LU604_RS17435;product=RnfH family protein;protein_id=WP_016191801.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3260235 3260669 . - . ID=gene-LU604_RS17440;Name=LU604_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17440;old_locus_tag=LU604_17440 NZ_CP089942.1 Protein Homology CDS 3260235 3260669 . - 0 ID=cds-WP_016191800.1;Parent=gene-LU604_RS17440;Dbxref=Genbank:WP_016191800.1;Name=WP_016191800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667337.1;locus_tag=LU604_RS17440;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_016191800.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3260828 3261310 . + . ID=gene-LU604_RS17445;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=LU604_RS17445;old_locus_tag=LU604_17445 NZ_CP089942.1 Protein Homology CDS 3260828 3261310 . + 0 ID=cds-WP_016191799.1;Parent=gene-LU604_RS17445;Dbxref=Genbank:WP_016191799.1;Name=WP_016191799.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147562.1;locus_tag=LU604_RS17445;product=SsrA-binding protein SmpB;protein_id=WP_016191799.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3261360 3261740 . + . ID=gene-LU604_RS17450;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=LU604_RS17450;old_locus_tag=LU604_17450 NZ_CP089942.1 cmsearch tmRNA 3261360 3261740 . + . ID=rna-LU604_RS17450;Parent=gene-LU604_RS17450;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS17450;product=transfer-messenger RNA NZ_CP089942.1 cmsearch exon 3261360 3261740 . + . ID=exon-LU604_RS17450-1;Parent=rna-LU604_RS17450;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS17450;product=transfer-messenger RNA NZ_CP089942.1 RefSeq gene 3262010 3262255 . + . ID=gene-LU604_RS17455;Name=LU604_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17455;old_locus_tag=LU604_17455 NZ_CP089942.1 Protein Homology CDS 3262010 3262255 . + 0 ID=cds-WP_233478880.1;Parent=gene-LU604_RS17455;Dbxref=Genbank:WP_233478880.1;Name=WP_233478880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906749.1;locus_tag=LU604_RS17455;product=DinI-like family protein;protein_id=WP_233478880.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3262357 3262536 . + . ID=gene-LU604_RS17460;Name=LU604_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17460;old_locus_tag=LU604_17460 NZ_CP089942.1 Protein Homology CDS 3262357 3262536 . + 0 ID=cds-WP_063162134.1;Parent=gene-LU604_RS17460;Dbxref=Genbank:WP_063162134.1;Name=WP_063162134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906750.1;locus_tag=LU604_RS17460;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_063162134.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3262558 3262953 . + . ID=gene-LU604_RS17465;Name=LU604_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17465;old_locus_tag=LU604_17465 NZ_CP089942.1 Protein Homology CDS 3262558 3262953 . + 0 ID=cds-WP_233478881.1;Parent=gene-LU604_RS17465;Dbxref=Genbank:WP_233478881.1;Name=WP_233478881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005973344.1;locus_tag=LU604_RS17465;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_233478881.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3263004 3264044 . - . ID=gene-LU604_RS17470;Name=LU604_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17470;old_locus_tag=LU604_17470 NZ_CP089942.1 Protein Homology CDS 3263004 3264044 . - 0 ID=cds-WP_233478553.1-22;Parent=gene-LU604_RS17470;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS17470;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3264208 3264567 . + . ID=gene-LU604_RS17475;Name=LU604_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17475;old_locus_tag=LU604_17475 NZ_CP089942.1 Protein Homology CDS 3264208 3264567 . + 0 ID=cds-WP_233478883.1;Parent=gene-LU604_RS17475;Dbxref=Genbank:WP_233478883.1;Name=WP_233478883.1;Ontology_term=GO:0000271,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000915539.1;locus_tag=LU604_RS17475;product=GtrA family protein;protein_id=WP_233478883.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3264564 3265484 . + . ID=gene-LU604_RS17480;Name=LU604_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17480;old_locus_tag=LU604_17480 NZ_CP089942.1 Protein Homology CDS 3264564 3265484 . + 0 ID=cds-WP_233478884.1;Parent=gene-LU604_RS17480;Dbxref=Genbank:WP_233478884.1;Name=WP_233478884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005182556.1;locus_tag=LU604_RS17480;product=glycosyltransferase family 2 protein;protein_id=WP_233478884.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3265484 3266701 . + . ID=gene-LU604_RS17485;Name=LU604_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17485;old_locus_tag=LU604_17485 NZ_CP089942.1 Protein Homology CDS 3265484 3266701 . + 0 ID=cds-WP_233478885.1;Parent=gene-LU604_RS17485;Dbxref=Genbank:WP_233478885.1;Name=WP_233478885.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039639.1;locus_tag=LU604_RS17485;product=DUF6056 family protein;protein_id=WP_233478885.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3266749 3267180 . - . ID=gene-LU604_RS17490;Name=LU604_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17490;old_locus_tag=LU604_17490 NZ_CP089942.1 Protein Homology CDS 3266749 3267180 . - 0 ID=cds-WP_233478886.1;Parent=gene-LU604_RS17490;Dbxref=Genbank:WP_233478886.1;Name=WP_233478886.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014467.2;locus_tag=LU604_RS17490;product=tail fiber assembly protein;protein_id=WP_233478886.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3267182 3268225 . - . ID=gene-LU604_RS17495;Name=LU604_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17495;old_locus_tag=LU604_17495 NZ_CP089942.1 Protein Homology CDS 3267182 3268225 . - 0 ID=cds-WP_233478887.1;Parent=gene-LU604_RS17495;Dbxref=Genbank:WP_233478887.1;Name=WP_233478887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906754.1;locus_tag=LU604_RS17495;product=hypothetical protein;protein_id=WP_233478887.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3268276 3268881 . - . ID=gene-LU604_RS17500;Name=LU604_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17500;old_locus_tag=LU604_17500 NZ_CP089942.1 Protein Homology CDS 3268276 3268881 . - 0 ID=cds-WP_233478888.1;Parent=gene-LU604_RS17500;Dbxref=Genbank:WP_233478888.1;Name=WP_233478888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906755.1;locus_tag=LU604_RS17500;product=DUF2313 domain-containing protein;protein_id=WP_233478888.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3268878 3270032 . - . ID=gene-LU604_RS17505;Name=LU604_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17505;old_locus_tag=LU604_17505 NZ_CP089942.1 Protein Homology CDS 3268878 3270032 . - 0 ID=cds-WP_233478889.1;Parent=gene-LU604_RS17505;Dbxref=Genbank:WP_233478889.1;Name=WP_233478889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906756.1;locus_tag=LU604_RS17505;product=baseplate J/gp47 family protein;protein_id=WP_233478889.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3270004 3270468 . - . ID=gene-LU604_RS17510;Name=LU604_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17510;old_locus_tag=LU604_17510 NZ_CP089942.1 Protein Homology CDS 3270004 3270468 . - 0 ID=cds-WP_233478890.1;Parent=gene-LU604_RS17510;Dbxref=Genbank:WP_233478890.1;Name=WP_233478890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279799.1;locus_tag=LU604_RS17510;product=phage GP46 family protein;protein_id=WP_233478890.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3270468 3271055 . - . ID=gene-LU604_RS17515;Name=LU604_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17515;old_locus_tag=LU604_17515 NZ_CP089942.1 Protein Homology CDS 3270468 3271055 . - 0 ID=cds-WP_233478891.1;Parent=gene-LU604_RS17515;Dbxref=Genbank:WP_233478891.1;Name=WP_233478891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001075148.1;locus_tag=LU604_RS17515;product=phage baseplate assembly protein;protein_id=WP_233478891.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3271052 3272125 . - . ID=gene-LU604_RS17520;Name=LU604_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17520;old_locus_tag=LU604_17520 NZ_CP089942.1 Protein Homology CDS 3271052 3272125 . - 0 ID=cds-WP_233478892.1;Parent=gene-LU604_RS17520;Dbxref=Genbank:WP_233478892.1;Name=WP_233478892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122417.1;locus_tag=LU604_RS17520;product=phage tail protein;protein_id=WP_233478892.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3272112 3273527 . - . ID=gene-LU604_RS17525;Name=LU604_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17525;old_locus_tag=LU604_17525 NZ_CP089942.1 Protein Homology CDS 3272112 3273527 . - 0 ID=cds-WP_233478893.1;Parent=gene-LU604_RS17525;Dbxref=Genbank:WP_233478893.1;Name=WP_233478893.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018818.2;locus_tag=LU604_RS17525;product=DNA circularization N-terminal domain-containing protein;protein_id=WP_233478893.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3273540 3275441 . - . ID=gene-LU604_RS17530;Name=LU604_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17530;old_locus_tag=LU604_17530 NZ_CP089942.1 GeneMarkS-2+ CDS 3273540 3275441 . - 0 ID=cds-WP_233478894.1;Parent=gene-LU604_RS17530;Dbxref=Genbank:WP_233478894.1;Name=WP_233478894.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS17530;product=hypothetical protein;protein_id=WP_233478894.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3275556 3275861 . - . ID=gene-LU604_RS17535;Name=LU604_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17535;old_locus_tag=LU604_17535 NZ_CP089942.1 Protein Homology CDS 3275556 3275861 . - 0 ID=cds-WP_233478895.1;Parent=gene-LU604_RS17535;Dbxref=Genbank:WP_233478895.1;Name=WP_233478895.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021614.2;locus_tag=LU604_RS17535;product=phage tail assembly protein;protein_id=WP_233478895.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3275863 3276222 . - . ID=gene-LU604_RS17540;Name=LU604_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17540;old_locus_tag=LU604_17540 NZ_CP089942.1 Protein Homology CDS 3275863 3276222 . - 0 ID=cds-WP_233478896.1;Parent=gene-LU604_RS17540;Dbxref=Genbank:WP_233478896.1;Name=WP_233478896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004708659.1;locus_tag=LU604_RS17540;product=phage tail tube protein;protein_id=WP_233478896.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3276235 3277764 . - . ID=gene-LU604_RS17545;Name=LU604_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17545;old_locus_tag=LU604_17545 NZ_CP089942.1 Protein Homology CDS 3276235 3277764 . - 0 ID=cds-WP_233478897.1;Parent=gene-LU604_RS17545;Dbxref=Genbank:WP_233478897.1;Name=WP_233478897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001472192.1;locus_tag=LU604_RS17545;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_233478897.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3277761 3277925 . - . ID=gene-LU604_RS17550;Name=LU604_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17550;old_locus_tag=LU604_17550 NZ_CP089942.1 Protein Homology CDS 3277761 3277925 . - 0 ID=cds-WP_233478898.1;Parent=gene-LU604_RS17550;Dbxref=Genbank:WP_233478898.1;Name=WP_233478898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009112625.1;locus_tag=LU604_RS17550;product=DUF2635 domain-containing protein;protein_id=WP_233478898.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3277930 3278472 . - . ID=gene-LU604_RS17555;Name=LU604_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17555;old_locus_tag=LU604_17555 NZ_CP089942.1 Protein Homology CDS 3277930 3278472 . - 0 ID=cds-WP_233478899.1;Parent=gene-LU604_RS17555;Dbxref=Genbank:WP_233478899.1;Name=WP_233478899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001568792.1;locus_tag=LU604_RS17555;product=ATP-binding protein;protein_id=WP_233478899.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3278469 3278807 . - . ID=gene-LU604_RS17560;Name=LU604_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17560;old_locus_tag=LU604_17560 NZ_CP089942.1 Protein Homology CDS 3278469 3278807 . - 0 ID=cds-WP_233478900.1;Parent=gene-LU604_RS17560;Dbxref=Genbank:WP_233478900.1;Name=WP_233478900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009112623.1;locus_tag=LU604_RS17560;product=hypothetical protein;protein_id=WP_233478900.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3278797 3279141 . - . ID=gene-LU604_RS17565;Name=LU604_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17565;old_locus_tag=LU604_17565 NZ_CP089942.1 GeneMarkS-2+ CDS 3278797 3279141 . - 0 ID=cds-WP_233478901.1;Parent=gene-LU604_RS17565;Dbxref=Genbank:WP_233478901.1;Name=WP_233478901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS17565;product=hypothetical protein;protein_id=WP_233478901.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3279144 3280190 . - . ID=gene-LU604_RS17570;Name=LU604_RS17570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17570;old_locus_tag=LU604_17570;pseudo=true NZ_CP089942.1 Protein Homology CDS 3279144 3280190 . - 0 ID=cds-LU604_RS17570;Parent=gene-LU604_RS17570;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005174459.1;locus_tag=LU604_RS17570;product=major capsid protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3280294 3280713 . - . ID=gene-LU604_RS17575;Name=LU604_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17575;old_locus_tag=LU604_17575 NZ_CP089942.1 Protein Homology CDS 3280294 3280713 . - 0 ID=cds-WP_233480830.1;Parent=gene-LU604_RS17575;Dbxref=Genbank:WP_233480830.1;Name=WP_233480830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906771.1;locus_tag=LU604_RS17575;product=head decoration protein;protein_id=WP_233480830.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3280723 3281316 . - . ID=gene-LU604_RS17580;Name=LU604_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17580;old_locus_tag=LU604_17580 NZ_CP089942.1 Protein Homology CDS 3280723 3281316 . - 0 ID=cds-WP_233478902.1;Parent=gene-LU604_RS17580;Dbxref=Genbank:WP_233478902.1;Name=WP_233478902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005174463.1;locus_tag=LU604_RS17580;product=hypothetical protein;protein_id=WP_233478902.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3281318 3282175 . - . ID=gene-LU604_RS17585;Name=LU604_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17585;old_locus_tag=LU604_17585 NZ_CP089942.1 Protein Homology CDS 3281318 3282175 . - 0 ID=cds-WP_233478903.1;Parent=gene-LU604_RS17585;Dbxref=Genbank:WP_233478903.1;Name=WP_233478903.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708310.1;locus_tag=LU604_RS17585;product=S49 family peptidase;protein_id=WP_233478903.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3282172 3283815 . - . ID=gene-LU604_RS17590;Name=LU604_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17590;old_locus_tag=LU604_17590 NZ_CP089942.1 Protein Homology CDS 3282172 3283815 . - 0 ID=cds-WP_233478904.1;Parent=gene-LU604_RS17590;Dbxref=Genbank:WP_233478904.1;Name=WP_233478904.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906774.1;locus_tag=LU604_RS17590;product=phage portal protein;protein_id=WP_233478904.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3283809 3284075 . - . ID=gene-LU604_RS17595;Name=LU604_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17595;old_locus_tag=LU604_17595 NZ_CP089942.1 Protein Homology CDS 3283809 3284075 . - 0 ID=cds-WP_233478905.1;Parent=gene-LU604_RS17595;Dbxref=Genbank:WP_233478905.1;Name=WP_233478905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906775.1;locus_tag=LU604_RS17595;product=gpW family protein;protein_id=WP_233478905.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3284084 3286054 . - . ID=gene-LU604_RS17600;Name=LU604_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17600;old_locus_tag=LU604_17600 NZ_CP089942.1 Protein Homology CDS 3284084 3286054 . - 0 ID=cds-WP_233478906.1;Parent=gene-LU604_RS17600;Dbxref=Genbank:WP_233478906.1;Name=WP_233478906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004904849.1;locus_tag=LU604_RS17600;product=phage terminase large subunit family protein;protein_id=WP_233478906.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3286008 3286613 . - . ID=gene-LU604_RS17605;Name=LU604_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17605;old_locus_tag=LU604_17605 NZ_CP089942.1 Protein Homology CDS 3286008 3286613 . - 0 ID=cds-WP_233478907.1;Parent=gene-LU604_RS17605;Dbxref=Genbank:WP_233478907.1;Name=WP_233478907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009112614.1;locus_tag=LU604_RS17605;product=RNA polymerase subunit sigma-70;protein_id=WP_233478907.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3286799 3287026 . + . ID=gene-LU604_RS17610;Name=LU604_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17610;old_locus_tag=LU604_17610 NZ_CP089942.1 GeneMarkS-2+ CDS 3286799 3287026 . + 0 ID=cds-WP_233478908.1;Parent=gene-LU604_RS17610;Dbxref=Genbank:WP_233478908.1;Name=WP_233478908.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS17610;product=hypothetical protein;protein_id=WP_233478908.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3287061 3288101 . - . ID=gene-LU604_RS17615;Name=LU604_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17615;old_locus_tag=LU604_17615 NZ_CP089942.1 Protein Homology CDS 3287061 3288101 . - 0 ID=cds-WP_233478553.1-23;Parent=gene-LU604_RS17615;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS17615;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3288206 3289078 . - . ID=gene-LU604_RS17620;Name=LU604_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17620;old_locus_tag=LU604_17620 NZ_CP089942.1 Protein Homology CDS 3288206 3289078 . - 0 ID=cds-WP_233478909.1;Parent=gene-LU604_RS17620;Dbxref=Genbank:WP_233478909.1;Name=WP_233478909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000835351.1;locus_tag=LU604_RS17620;product=phage antirepressor N-terminal domain-containing protein;protein_id=WP_233478909.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3289180 3289353 . - . ID=gene-LU604_RS17625;Name=LU604_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17625;old_locus_tag=LU604_17625 NZ_CP089942.1 Protein Homology CDS 3289180 3289353 . - 0 ID=cds-WP_233478910.1;Parent=gene-LU604_RS17625;Dbxref=Genbank:WP_233478910.1;Name=WP_233478910.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136225.1;locus_tag=LU604_RS17625;product=Arc family DNA-binding protein;protein_id=WP_233478910.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3289434 3289784 . + . ID=gene-LU604_RS17630;Name=LU604_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17630;old_locus_tag=LU604_17630 NZ_CP089942.1 Protein Homology CDS 3289434 3289784 . + 0 ID=cds-WP_233478911.1;Parent=gene-LU604_RS17630;Dbxref=Genbank:WP_233478911.1;Name=WP_233478911.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091520.1;locus_tag=LU604_RS17630;product=Arc family DNA-binding protein;protein_id=WP_233478911.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3289928 3290173 . + . ID=gene-LU604_RS17635;Name=LU604_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17635;old_locus_tag=LU604_17635 NZ_CP089942.1 Protein Homology CDS 3289928 3290173 . + 0 ID=cds-WP_233478880.1-2;Parent=gene-LU604_RS17635;Dbxref=Genbank:WP_233478880.1;Name=WP_233478880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906749.1;locus_tag=LU604_RS17635;product=DinI-like family protein;protein_id=WP_233478880.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3290276 3290455 . + . ID=gene-LU604_RS17640;Name=LU604_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17640;old_locus_tag=LU604_17640 NZ_CP089942.1 Protein Homology CDS 3290276 3290455 . + 0 ID=cds-WP_233478912.1;Parent=gene-LU604_RS17640;Dbxref=Genbank:WP_233478912.1;Name=WP_233478912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906750.1;locus_tag=LU604_RS17640;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_233478912.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3290478 3290882 . + . ID=gene-LU604_RS17645;Name=LU604_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17645;old_locus_tag=LU604_17645 NZ_CP089942.1 Protein Homology CDS 3290478 3290882 . + 0 ID=cds-WP_233478913.1;Parent=gene-LU604_RS17645;Dbxref=Genbank:WP_233478913.1;Name=WP_233478913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202996.1;locus_tag=LU604_RS17645;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_233478913.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3290919 3291278 . + . ID=gene-LU604_RS17650;Name=LU604_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17650;old_locus_tag=LU604_17650 NZ_CP089942.1 Protein Homology CDS 3290919 3291278 . + 0 ID=cds-WP_233478914.1;Parent=gene-LU604_RS17650;Dbxref=Genbank:WP_233478914.1;Name=WP_233478914.1;Ontology_term=GO:0000271,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000915539.1;locus_tag=LU604_RS17650;product=GtrA family protein;protein_id=WP_233478914.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3291275 3292183 . + . ID=gene-LU604_RS17655;Name=LU604_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17655;old_locus_tag=LU604_17655 NZ_CP089942.1 Protein Homology CDS 3291275 3292183 . + 0 ID=cds-WP_233478915.1;Parent=gene-LU604_RS17655;Dbxref=Genbank:WP_233478915.1;Name=WP_233478915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000703663.1;locus_tag=LU604_RS17655;product=glycosyltransferase family 2 protein;protein_id=WP_233478915.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3292189 3292821 . + . ID=gene-LU604_RS17660;Name=LU604_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17660;old_locus_tag=LU604_17660 NZ_CP089942.1 GeneMarkS-2+ CDS 3292189 3292821 . + 0 ID=cds-WP_233478916.1;Parent=gene-LU604_RS17660;Dbxref=Genbank:WP_233478916.1;Name=WP_233478916.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS17660;product=hypothetical protein;protein_id=WP_233478916.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3292857 3293696 . + . ID=gene-LU604_RS17665;Name=LU604_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17665;old_locus_tag=LU604_17665 NZ_CP089942.1 GeneMarkS-2+ CDS 3292857 3293696 . + 0 ID=cds-WP_233478917.1;Parent=gene-LU604_RS17665;Dbxref=Genbank:WP_233478917.1;Name=WP_233478917.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS17665;product=hypothetical protein;protein_id=WP_233478917.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3293760 3294188 . - . ID=gene-LU604_RS17670;Name=LU604_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17670;old_locus_tag=LU604_17670 NZ_CP089942.1 Protein Homology CDS 3293760 3294188 . - 0 ID=cds-WP_233481346.1;Parent=gene-LU604_RS17670;Dbxref=Genbank:WP_233481346.1;Name=WP_233481346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007751543.1;locus_tag=LU604_RS17670;product=tail fiber assembly protein;protein_id=WP_233481346.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3294273 3295393 . - . ID=gene-LU604_RS17675;Name=LU604_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17675;old_locus_tag=LU604_17675 NZ_CP089942.1 Protein Homology CDS 3295135 3295393 . - 0 ID=cds-WP_233478919.1;Parent=gene-LU604_RS17675;Dbxref=Genbank:WP_233478919.1;Name=WP_233478919.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS17675;product=IS3 family transposase;protein_id=WP_233478919.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 3294273 3295135 . - 2 ID=cds-WP_233478919.1;Parent=gene-LU604_RS17675;Dbxref=Genbank:WP_233478919.1;Name=WP_233478919.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS17675;product=IS3 family transposase;protein_id=WP_233478919.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3295528 3295692 . + . ID=gene-LU604_RS17680;Name=LU604_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17680;old_locus_tag=LU604_17680 NZ_CP089942.1 GeneMarkS-2+ CDS 3295528 3295692 . + 0 ID=cds-WP_233478920.1;Parent=gene-LU604_RS17680;Dbxref=Genbank:WP_233478920.1;Name=WP_233478920.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS17680;product=hypothetical protein;protein_id=WP_233478920.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3295698 3295871 . - . ID=gene-LU604_RS17685;Name=LU604_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17685;old_locus_tag=LU604_17685 NZ_CP089942.1 GeneMarkS-2+ CDS 3295698 3295871 . - 0 ID=cds-WP_233478921.1;Parent=gene-LU604_RS17685;Dbxref=Genbank:WP_233478921.1;Name=WP_233478921.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS17685;product=hypothetical protein;protein_id=WP_233478921.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3296170 3297294 . + . ID=gene-LU604_RS17690;Name=LU604_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17690;old_locus_tag=LU604_17690 NZ_CP089942.1 Protein Homology CDS 3296170 3297294 . + 0 ID=cds-WP_233478922.1;Parent=gene-LU604_RS17690;Dbxref=Genbank:WP_233478922.1;Name=WP_233478922.1;Ontology_term=GO:0006113,GO:0009404,GO:0004024,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,S-(hydroxymethyl)glutathione dehydrogenase activity|0051903||IEA;go_process=fermentation|0006113||IEA,toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010248270.1;locus_tag=LU604_RS17690;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_233478922.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3297307 3298149 . + . ID=gene-LU604_RS17695;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=LU604_RS17695;old_locus_tag=LU604_17695 NZ_CP089942.1 Protein Homology CDS 3297307 3298149 . + 0 ID=cds-WP_233478923.1;Parent=gene-LU604_RS17695;Dbxref=Genbank:WP_233478923.1;Name=WP_233478923.1;Ontology_term=GO:0046292,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010671004.1;locus_tag=LU604_RS17695;product=S-formylglutathione hydrolase;protein_id=WP_233478923.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3298192 3298980 . - . ID=gene-LU604_RS17700;Name=LU604_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17700;old_locus_tag=LU604_17700 NZ_CP089942.1 Protein Homology CDS 3298192 3298980 . - 0 ID=cds-WP_087949740.1;Parent=gene-LU604_RS17700;Dbxref=Genbank:WP_087949740.1;Name=WP_087949740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208783.1;locus_tag=LU604_RS17700;product=ABC transporter ATP-binding protein;protein_id=WP_087949740.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3298977 3300059 . - . ID=gene-LU604_RS17705;Name=LU604_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17705;old_locus_tag=LU604_17705 NZ_CP089942.1 Protein Homology CDS 3298977 3300059 . - 0 ID=cds-WP_233478924.1;Parent=gene-LU604_RS17705;Dbxref=Genbank:WP_233478924.1;Name=WP_233478924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673046.1;locus_tag=LU604_RS17705;product=iron ABC transporter permease;protein_id=WP_233478924.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3300201 3301676 . - . ID=gene-LU604_RS17710;Name=LU604_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17710;old_locus_tag=LU604_17710 NZ_CP089942.1 Protein Homology CDS 3300201 3301676 . - 0 ID=cds-WP_233478925.1;Parent=gene-LU604_RS17710;Dbxref=Genbank:WP_233478925.1;Name=WP_233478925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192927.1;locus_tag=LU604_RS17710;product=amino acid permease;protein_id=WP_233478925.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3301842 3302714 . - . ID=gene-LU604_RS17715;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=LU604_RS17715;old_locus_tag=LU604_17715 NZ_CP089942.1 Protein Homology CDS 3301842 3302714 . - 0 ID=cds-WP_233478926.1;Parent=gene-LU604_RS17715;Dbxref=Genbank:WP_233478926.1;Name=WP_233478926.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192928.1;locus_tag=LU604_RS17715;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_233478926.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3302726 3302854 . + . ID=gene-LU604_RS27020;Name=LU604_RS27020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27020 NZ_CP089942.1 GeneMarkS-2+ CDS 3302726 3302854 . + 0 ID=cds-WP_256371753.1;Parent=gene-LU604_RS27020;Dbxref=Genbank:WP_256371753.1;Name=WP_256371753.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS27020;product=hypothetical protein;protein_id=WP_256371753.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3302944 3304002 . + . ID=gene-LU604_RS17720;Name=LU604_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17720;old_locus_tag=LU604_17720 NZ_CP089942.1 Protein Homology CDS 3302944 3304002 . + 0 ID=cds-WP_233478927.1;Parent=gene-LU604_RS17720;Dbxref=Genbank:WP_233478927.1;Name=WP_233478927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203014.1;locus_tag=LU604_RS17720;product=YeiH family putative sulfate export transporter;protein_id=WP_233478927.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3304069 3304911 . + . ID=gene-LU604_RS17725;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=LU604_RS17725;old_locus_tag=LU604_17725 NZ_CP089942.1 Protein Homology CDS 3304069 3304911 . + 0 ID=cds-WP_233478928.1;Parent=gene-LU604_RS17725;Dbxref=Genbank:WP_233478928.1;Name=WP_233478928.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192931.1;locus_tag=LU604_RS17725;product=deoxyribonuclease IV;protein_id=WP_233478928.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3305055 3305372 . + . ID=gene-LU604_RS17730;Name=LU604_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17730;old_locus_tag=LU604_17730 NZ_CP089942.1 GeneMarkS-2+ CDS 3305055 3305372 . + 0 ID=cds-WP_233478929.1;Parent=gene-LU604_RS17730;Dbxref=Genbank:WP_233478929.1;Name=WP_233478929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS17730;product=hypothetical protein;protein_id=WP_233478929.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3306040 3307740 . - . ID=gene-LU604_RS17735;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=LU604_RS17735;old_locus_tag=LU604_17735 NZ_CP089942.1 Protein Homology CDS 3306040 3307740 . - 0 ID=cds-WP_233478930.1;Parent=gene-LU604_RS17735;Dbxref=Genbank:WP_233478930.1;Name=WP_233478930.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158436.1;locus_tag=LU604_RS17735;product=PTS fructose transporter subunit IIBC;protein_id=WP_233478930.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3307756 3308694 . - . ID=gene-LU604_RS17740;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=LU604_RS17740;old_locus_tag=LU604_17740 NZ_CP089942.1 Protein Homology CDS 3307756 3308694 . - 0 ID=cds-WP_233478931.1;Parent=gene-LU604_RS17740;Dbxref=Genbank:WP_233478931.1;Name=WP_233478931.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203017.1;locus_tag=LU604_RS17740;product=1-phosphofructokinase;protein_id=WP_233478931.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3308691 3309824 . - . ID=gene-LU604_RS17745;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=LU604_RS17745;old_locus_tag=LU604_17745 NZ_CP089942.1 Protein Homology CDS 3308691 3309824 . - 0 ID=cds-WP_233478932.1;Parent=gene-LU604_RS17745;Dbxref=Genbank:WP_233478932.1;Name=WP_233478932.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441014.1;locus_tag=LU604_RS17745;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_233478932.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3310101 3310634 . + . ID=gene-LU604_RS17750;Name=LU604_RS17750;end_range=3310634,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17750;old_locus_tag=LU604_17750;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3310101 3310634 . + 0 ID=cds-LU604_RS17750;Parent=gene-LU604_RS17750;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3310634,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332260.1;locus_tag=LU604_RS17750;partial=true;product=site-specific integrase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3310701 3311405 . + . ID=gene-LU604_RS17755;Name=LU604_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17755;old_locus_tag=LU604_17755 NZ_CP089942.1 Protein Homology CDS 3310701 3311405 . + 0 ID=cds-WP_233478933.1;Parent=gene-LU604_RS17755;Dbxref=Genbank:WP_233478933.1;Name=WP_233478933.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU604_RS17755;product=IS6 family transposase;protein_id=WP_233478933.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3311667 3311909 . - . ID=gene-LU604_RS17760;Name=LU604_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17760;old_locus_tag=LU604_17760 NZ_CP089942.1 Protein Homology CDS 3311667 3311909 . - 0 ID=cds-WP_233478934.1;Parent=gene-LU604_RS17760;Dbxref=Genbank:WP_233478934.1;Name=WP_233478934.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022183.2;locus_tag=LU604_RS17760;product=hypothetical protein;protein_id=WP_233478934.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3311987 3313441 . - . ID=gene-LU604_RS17765;Name=LU604_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17765;old_locus_tag=LU604_17765 NZ_CP089942.1 Protein Homology CDS 3311987 3313441 . - 0 ID=cds-WP_233481347.1;Parent=gene-LU604_RS17765;Dbxref=Genbank:WP_233481347.1;Name=WP_233481347.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03760.1;locus_tag=LU604_RS17765;product=TraI domain-containing protein;protein_id=WP_233481347.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3313672 3314286 . - . ID=gene-LU604_RS17770;Name=LU604_RS17770;end_range=3314286,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17770;old_locus_tag=LU604_17770;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3313672 3314286 . - 0 ID=cds-LU604_RS17770;Parent=gene-LU604_RS17770;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3314286,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122451.1;locus_tag=LU604_RS17770;partial=true;product=phage tail tape measure protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3314370 3315593 . + . ID=gene-LU604_RS17775;Name=LU604_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17775;old_locus_tag=LU604_17775 NZ_CP089942.1 Protein Homology CDS 3314370 3315593 . + 0 ID=cds-WP_233481348.1;Parent=gene-LU604_RS17775;Dbxref=Genbank:WP_233481348.1;Name=WP_233481348.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU604_RS17775;product=IS91 family transposase;protein_id=WP_233481348.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3315728 3317608 . - . ID=gene-LU604_RS17780;Name=LU604_RS17780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17780;old_locus_tag=LU604_17780;partial=true;pseudo=true;start_range=.,3315728 NZ_CP089942.1 Protein Homology CDS 3315728 3317608 . - 0 ID=cds-LU604_RS17780;Parent=gene-LU604_RS17780;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001705208.1;locus_tag=LU604_RS17780;partial=true;product=phage tail tape measure protein;pseudo=true;start_range=.,3315728;transl_table=11 NZ_CP089942.1 RefSeq gene 3317641 3317922 . - . ID=gene-LU604_RS17785;Name=LU604_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17785;old_locus_tag=LU604_17785 NZ_CP089942.1 GeneMarkS-2+ CDS 3317641 3317922 . - 0 ID=cds-WP_233478937.1;Parent=gene-LU604_RS17785;Dbxref=Genbank:WP_233478937.1;Name=WP_233478937.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS17785;product=hypothetical protein;protein_id=WP_233478937.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3318025 3318234 . - . ID=gene-LU604_RS17790;Name=LU604_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17790;old_locus_tag=LU604_17790 NZ_CP089942.1 GeneMarkS-2+ CDS 3318025 3318234 . - 0 ID=cds-WP_233478938.1;Parent=gene-LU604_RS17790;Dbxref=Genbank:WP_233478938.1;Name=WP_233478938.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS17790;product=hypothetical protein;protein_id=WP_233478938.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3318236 3318850 . - . ID=gene-LU604_RS17795;Name=LU604_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17795;old_locus_tag=LU604_17795 NZ_CP089942.1 Protein Homology CDS 3318236 3318850 . - 0 ID=cds-WP_233478939.1;Parent=gene-LU604_RS17795;Dbxref=Genbank:WP_233478939.1;Name=WP_233478939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192266.1;locus_tag=LU604_RS17795;product=hypothetical protein;protein_id=WP_233478939.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3318893 3319249 . - . ID=gene-LU604_RS17800;Name=LU604_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17800;old_locus_tag=LU604_17800 NZ_CP089942.1 Protein Homology CDS 3318893 3319249 . - 0 ID=cds-WP_233478940.1;Parent=gene-LU604_RS17800;Dbxref=Genbank:WP_233478940.1;Name=WP_233478940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000182664.1;locus_tag=LU604_RS17800;product=hypothetical protein;protein_id=WP_233478940.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3319492 3319779 . - . ID=gene-LU604_RS17805;Name=LU604_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17805;old_locus_tag=LU604_17805 NZ_CP089942.1 GeneMarkS-2+ CDS 3319492 3319779 . - 0 ID=cds-WP_233478941.1;Parent=gene-LU604_RS17805;Dbxref=Genbank:WP_233478941.1;Name=WP_233478941.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS17805;product=hypothetical protein;protein_id=WP_233478941.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3319776 3320507 . - . ID=gene-LU604_RS17810;Name=LU604_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17810;old_locus_tag=LU604_17810 NZ_CP089942.1 Protein Homology CDS 3319776 3320507 . - 0 ID=cds-WP_233478942.1;Parent=gene-LU604_RS17810;Dbxref=Genbank:WP_233478942.1;Name=WP_233478942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000512451.1;locus_tag=LU604_RS17810;product=DUF3102 domain-containing protein;protein_id=WP_233478942.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3320847 3321797 . + . ID=gene-LU604_RS17815;Name=LU604_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17815;old_locus_tag=LU604_17815 NZ_CP089942.1 Protein Homology CDS 3320847 3321797 . + 0 ID=cds-WP_233478943.1;Parent=gene-LU604_RS17815;Dbxref=Genbank:WP_233478943.1;Name=WP_233478943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808598.1;locus_tag=LU604_RS17815;product=hypothetical protein;protein_id=WP_233478943.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3321865 3322905 . - . ID=gene-LU604_RS17820;Name=LU604_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17820;old_locus_tag=LU604_17820 NZ_CP089942.1 Protein Homology CDS 3321865 3322905 . - 0 ID=cds-WP_233481349.1-2;Parent=gene-LU604_RS17820;Dbxref=Genbank:WP_233481349.1;Name=WP_233481349.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS17820;product=IS481 family transposase;protein_id=WP_233481349.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3323426 3324229 . + . ID=gene-LU604_RS17825;Name=LU604_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17825;old_locus_tag=LU604_17825 NZ_CP089942.1 Protein Homology CDS 3323426 3324229 . + 0 ID=cds-WP_233478944.1;Parent=gene-LU604_RS17825;Dbxref=Genbank:WP_233478944.1;Name=WP_233478944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192939.1;locus_tag=LU604_RS17825;product=DUF4225 domain-containing protein;protein_id=WP_233478944.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3324204 3324536 . - . ID=gene-LU604_RS17830;Name=LU604_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17830;old_locus_tag=LU604_17830 NZ_CP089942.1 Protein Homology CDS 3324204 3324536 . - 0 ID=cds-WP_016192940.1;Parent=gene-LU604_RS17830;Dbxref=Genbank:WP_016192940.1;Name=WP_016192940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852044.1;locus_tag=LU604_RS17830;product=hypothetical protein;protein_id=WP_016192940.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3324814 3325407 . - . ID=gene-LU604_RS17835;Name=LU604_RS17835;end_range=3325407,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17835;old_locus_tag=LU604_17835;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3324814 3325407 . - 0 ID=cds-LU604_RS17835;Parent=gene-LU604_RS17835;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=3325407,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495017.1;locus_tag=LU604_RS17835;partial=true;product=Tn3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3325431 3325553 . - . ID=gene-LU604_RS27025;Name=LU604_RS27025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27025 NZ_CP089942.1 GeneMarkS-2+ CDS 3325431 3325553 . - 0 ID=cds-WP_256371752.1;Parent=gene-LU604_RS27025;Dbxref=Genbank:WP_256371752.1;Name=WP_256371752.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS27025;product=hypothetical protein;protein_id=WP_256371752.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3325916 3326734 . - . ID=gene-LU604_RS17840;Name=LU604_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17840;old_locus_tag=LU604_17840 NZ_CP089942.1 Protein Homology CDS 3325916 3326734 . - 0 ID=cds-WP_233478945.1;Parent=gene-LU604_RS17840;Dbxref=Genbank:WP_233478945.1;Name=WP_233478945.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012606.2;locus_tag=LU604_RS17840;product=phosphatidylinositol-specific phospholipase C domain-containing protein;protein_id=WP_233478945.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3326976 3333587 . - . ID=gene-LU604_RS17845;Name=LU604_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17845;old_locus_tag=LU604_17845 NZ_CP089942.1 Protein Homology CDS 3326976 3333587 . - 0 ID=cds-WP_233481350.1;Parent=gene-LU604_RS17845;Dbxref=Genbank:WP_233481350.1;Name=WP_233481350.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015462.2;locus_tag=LU604_RS17845;product=CyaA/EF/ExoY family adenylyl cyclase toxin;protein_id=WP_233481350.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3333655 3334296 . - . ID=gene-LU604_RS17850;Name=LU604_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17850;old_locus_tag=LU604_17850 NZ_CP089942.1 Protein Homology CDS 3333655 3334296 . - 0 ID=cds-WP_046372395.1;Parent=gene-LU604_RS17850;Dbxref=Genbank:WP_046372395.1;Name=WP_046372395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012539947.1;locus_tag=LU604_RS17850;product=recombinase family protein;protein_id=WP_046372395.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3334388 3334714 . - . ID=gene-LU604_RS17855;Name=LU604_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17855;old_locus_tag=LU604_17855 NZ_CP089942.1 Protein Homology CDS 3334388 3334714 . - 0 ID=cds-WP_233481351.1;Parent=gene-LU604_RS17855;Dbxref=Genbank:WP_233481351.1;Name=WP_233481351.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022590.2;locus_tag=LU604_RS17855;product=DUF2913 family protein;protein_id=WP_233481351.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3334829 3335302 . + . ID=gene-LU604_RS17860;Name=LU604_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17860;old_locus_tag=LU604_17860 NZ_CP089942.1 Protein Homology CDS 3334829 3335302 . + 0 ID=cds-WP_233480831.1;Parent=gene-LU604_RS17860;Dbxref=Genbank:WP_233480831.1;Name=WP_233480831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193192.1;locus_tag=LU604_RS17860;product=phospholipase D family protein;protein_id=WP_233480831.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3335406 3335584 . + . ID=gene-LU604_RS17865;Name=LU604_RS17865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17865;old_locus_tag=LU604_17865;pseudo=true NZ_CP089942.1 Protein Homology CDS 3335406 3335584 . + 0 ID=cds-LU604_RS17865;Parent=gene-LU604_RS17865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322936.1;locus_tag=LU604_RS17865;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3335593 3336793 . + . ID=gene-LU604_RS17870;Name=LU604_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17870;old_locus_tag=LU604_17870 NZ_CP089942.1 Protein Homology CDS 3335593 3336420 . + 0 ID=cds-WP_233478723.1-5;Parent=gene-LU604_RS17870;Dbxref=Genbank:WP_233478723.1;Name=WP_233478723.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS17870;product=IS91 family transposase;protein_id=WP_233478723.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 3336422 3336793 . + 0 ID=cds-WP_233478723.1-5;Parent=gene-LU604_RS17870;Dbxref=Genbank:WP_233478723.1;Name=WP_233478723.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS17870;product=IS91 family transposase;protein_id=WP_233478723.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3337494 3338564 . + . ID=gene-LU604_RS17875;Name=LU604_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17875;old_locus_tag=LU604_17875 NZ_CP089942.1 GeneMarkS-2+ CDS 3337494 3338564 . + 0 ID=cds-WP_233481352.1;Parent=gene-LU604_RS17875;Dbxref=Genbank:WP_233481352.1;Name=WP_233481352.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS17875;product=hypothetical protein;protein_id=WP_233481352.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3338675 3339034 . - . ID=gene-LU604_RS17880;Name=LU604_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17880;old_locus_tag=LU604_17880 NZ_CP089942.1 Protein Homology CDS 3338675 3339034 . - 0 ID=cds-WP_233481353.1;Parent=gene-LU604_RS17880;Dbxref=Genbank:WP_233481353.1;Name=WP_233481353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196125.1;locus_tag=LU604_RS17880;product=transcriptional regulator;protein_id=WP_233481353.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3339040 3339342 . - . ID=gene-LU604_RS17885;Name=LU604_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17885;old_locus_tag=LU604_17885 NZ_CP089942.1 Protein Homology CDS 3339040 3339342 . - 0 ID=cds-WP_233481354.1;Parent=gene-LU604_RS17885;Dbxref=Genbank:WP_233481354.1;Name=WP_233481354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004142601.1;locus_tag=LU604_RS17885;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_233481354.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3339967 3340440 . - . ID=gene-LU604_RS17890;Name=LU604_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17890;old_locus_tag=LU604_17890 NZ_CP089942.1 GeneMarkS-2+ CDS 3339967 3340440 . - 0 ID=cds-WP_233481355.1;Parent=gene-LU604_RS17890;Dbxref=Genbank:WP_233481355.1;Name=WP_233481355.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS17890;product=hypothetical protein;protein_id=WP_233481355.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3340569 3342245 . - . ID=gene-LU604_RS17895;Name=LU604_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17895;old_locus_tag=LU604_17895 NZ_CP089942.1 GeneMarkS-2+ CDS 3340569 3342245 . - 0 ID=cds-WP_233481356.1;Parent=gene-LU604_RS17895;Dbxref=Genbank:WP_233481356.1;Name=WP_233481356.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS17895;product=hypothetical protein;protein_id=WP_233481356.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3342301 3342479 . + . ID=gene-LU604_RS17900;Name=LU604_RS17900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17900;old_locus_tag=LU604_17900;pseudo=true NZ_CP089942.1 Protein Homology CDS 3342301 3342479 . + 0 ID=cds-LU604_RS17900;Parent=gene-LU604_RS17900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322936.1;locus_tag=LU604_RS17900;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3342488 3343689 . + . ID=gene-LU604_RS17905;Name=LU604_RS17905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17905;old_locus_tag=LU604_17905;pseudo=true NZ_CP089942.1 Protein Homology CDS 3342488 3343689 . + 0 ID=cds-LU604_RS17905;Parent=gene-LU604_RS17905;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS17905;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3343902 3344599 . - . ID=gene-LU604_RS17910;Name=LU604_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17910;old_locus_tag=LU604_17910 NZ_CP089942.1 Protein Homology CDS 3344350 3344599 . - 0 ID=cds-WP_233481357.1;Parent=gene-LU604_RS17910;Dbxref=Genbank:WP_233481357.1;Name=WP_233481357.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU604_RS17910;product=IS1 family transposase;protein_id=WP_233481357.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 3343902 3344350 . - 2 ID=cds-WP_233481357.1;Parent=gene-LU604_RS17910;Dbxref=Genbank:WP_233481357.1;Name=WP_233481357.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU604_RS17910;product=IS1 family transposase;protein_id=WP_233481357.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3344654 3344785 . + . ID=gene-LU604_RS17915;Name=LU604_RS17915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17915;old_locus_tag=LU604_17915;partial=true;pseudo=true;start_range=.,3344654 NZ_CP089942.1 Protein Homology CDS 3344654 3344785 . + 0 ID=cds-LU604_RS17915;Parent=gene-LU604_RS17915;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322889.1;locus_tag=LU604_RS17915;partial=true;product=cell wall-binding protein;pseudo=true;start_range=.,3344654;transl_table=11 NZ_CP089942.1 RefSeq gene 3344895 3345470 . - . ID=gene-LU604_RS17920;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=LU604_RS17920;old_locus_tag=LU604_17920 NZ_CP089942.1 Protein Homology CDS 3344895 3345470 . - 0 ID=cds-WP_016192961.1;Parent=gene-LU604_RS17920;Dbxref=Genbank:WP_016192961.1;Name=WP_016192961.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158446.1;locus_tag=LU604_RS17920;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_016192961.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3345842 3346345 . - . ID=gene-LU604_RS17925;Name=LU604_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17925;old_locus_tag=LU604_17925 NZ_CP089942.1 Protein Homology CDS 3345842 3346345 . - 0 ID=cds-WP_233481358.1;Parent=gene-LU604_RS17925;Dbxref=Genbank:WP_233481358.1;Name=WP_233481358.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU604_RS17925;product=IS1 family transposase;protein_id=WP_233481358.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3346264 3346539 . - . ID=gene-LU604_RS17930;Name=LU604_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17930;old_locus_tag=LU604_17930 NZ_CP089942.1 Protein Homology CDS 3346264 3346539 . - 0 ID=cds-WP_233478950.1;Parent=gene-LU604_RS17930;Dbxref=Genbank:WP_233478950.1;Name=WP_233478950.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU604_RS17930;product=IS1-like element transposase;protein_id=WP_233478950.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3346742 3346956 . - . ID=gene-LU604_RS17935;Name=LU604_RS17935;end_range=3346956,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17935;old_locus_tag=LU604_17935;partial=true;pseudo=true;start_range=.,3346742 NZ_CP089942.1 Protein Homology CDS 3346742 3346956 . - 0 ID=cds-LU604_RS17935;Parent=gene-LU604_RS17935;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3346956,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158445.1;locus_tag=LU604_RS17935;partial=true;product=phosphatase PAP2 family protein;pseudo=true;start_range=.,3346742;transl_table=11 NZ_CP089942.1 RefSeq gene 3347233 3347532 . + . ID=gene-LU604_RS17940;Name=LU604_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17940;old_locus_tag=LU604_17940 NZ_CP089942.1 Protein Homology CDS 3347233 3347532 . + 0 ID=cds-WP_016192963.1;Parent=gene-LU604_RS17940;Dbxref=Genbank:WP_016192963.1;Name=WP_016192963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012849126.1;locus_tag=LU604_RS17940;product=hypothetical protein;protein_id=WP_016192963.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3347604 3348176 . - . ID=gene-LU604_RS17945;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=LU604_RS17945;old_locus_tag=LU604_17945 NZ_CP089942.1 Protein Homology CDS 3347604 3348176 . - 0 ID=cds-WP_233478951.1;Parent=gene-LU604_RS17945;Dbxref=Genbank:WP_233478951.1;Name=WP_233478951.1;Ontology_term=GO:0006414,GO:0043043,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA,peptide biosynthetic process|0043043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010617971.1;locus_tag=LU604_RS17945;product=elongation factor P-like protein YeiP;protein_id=WP_233478951.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3348364 3348492 . + . ID=gene-LU604_RS17950;Name=LU604_RS17950;end_range=3348492,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS17950;old_locus_tag=LU604_17950;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3348364 3348492 . + 0 ID=cds-LU604_RS17950;Parent=gene-LU604_RS17950;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3348492,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004387449.1;locus_tag=LU604_RS17950;partial=true;product=YkgJ family cysteine cluster protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3348531 3348782 . - . ID=gene-LU604_RS17955;Name=LU604_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17955;old_locus_tag=LU604_17955 NZ_CP089942.1 Protein Homology CDS 3348531 3348782 . - 0 ID=cds-WP_016192965.1;Parent=gene-LU604_RS17955;Dbxref=Genbank:WP_016192965.1;Name=WP_016192965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619014.1;locus_tag=LU604_RS17955;product=pyocin activator PrtN family protein;protein_id=WP_016192965.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3348779 3350086 . - . ID=gene-LU604_RS17960;Name=LU604_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17960;old_locus_tag=LU604_17960 NZ_CP089942.1 Protein Homology CDS 3348779 3350086 . - 0 ID=cds-WP_233481646.1;Parent=gene-LU604_RS17960;Dbxref=Genbank:WP_233481646.1;Name=WP_233481646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120529.1;locus_tag=LU604_RS17960;product=DEAD/DEAH box helicase;protein_id=WP_233481646.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3350312 3350614 . - . ID=gene-LU604_RS17965;Name=LU604_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17965;old_locus_tag=LU604_17965 NZ_CP089942.1 Protein Homology CDS 3350312 3350614 . - 0 ID=cds-WP_016192967.1-2;Parent=gene-LU604_RS17965;Dbxref=Genbank:WP_016192967.1;Name=WP_016192967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192967.1;locus_tag=LU604_RS17965;product=VRR-NUC domain-containing protein;protein_id=WP_016192967.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3350598 3350828 . - . ID=gene-LU604_RS17970;Name=LU604_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17970;old_locus_tag=LU604_17970 NZ_CP089942.1 Protein Homology CDS 3350598 3350828 . - 0 ID=cds-WP_016192968.1-2;Parent=gene-LU604_RS17970;Dbxref=Genbank:WP_016192968.1;Name=WP_016192968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303790.1;locus_tag=LU604_RS17970;product=ANR family transcriptional regulator;protein_id=WP_016192968.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3350844 3351056 . - . ID=gene-LU604_RS17975;Name=LU604_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17975;old_locus_tag=LU604_17975 NZ_CP089942.1 Protein Homology CDS 3350844 3351056 . - 0 ID=cds-WP_016192969.1-2;Parent=gene-LU604_RS17975;Dbxref=Genbank:WP_016192969.1;Name=WP_016192969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000873865.1;locus_tag=LU604_RS17975;product=hypothetical protein;protein_id=WP_016192969.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3351053 3351730 . - . ID=gene-LU604_RS17980;Name=LU604_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17980;old_locus_tag=LU604_17980 NZ_CP089942.1 GeneMarkS-2+ CDS 3351053 3351730 . - 0 ID=cds-WP_233478719.1-2;Parent=gene-LU604_RS17980;Dbxref=Genbank:WP_233478719.1;Name=WP_233478719.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS17980;product=hypothetical protein;protein_id=WP_233478719.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3351736 3352536 . - . ID=gene-LU604_RS17985;Name=LU604_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17985;old_locus_tag=LU604_17985 NZ_CP089942.1 Protein Homology CDS 3351736 3352536 . - 0 ID=cds-WP_233480832.1;Parent=gene-LU604_RS17985;Dbxref=Genbank:WP_233480832.1;Name=WP_233480832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001385924.1;locus_tag=LU604_RS17985;product=hypothetical protein;protein_id=WP_233480832.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3352706 3353143 . - . ID=gene-LU604_RS17990;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS17990;old_locus_tag=LU604_17990 NZ_CP089942.1 Protein Homology CDS 3352706 3353143 . - 0 ID=cds-WP_233478952.1;Parent=gene-LU604_RS17990;Dbxref=Genbank:WP_233478952.1;Name=WP_233478952.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU604_RS17990;product=IS200/IS605 family transposase;protein_id=WP_233478952.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3353324 3353842 . + . ID=gene-LU604_RS17995;Name=LU604_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS17995;old_locus_tag=LU604_17995 NZ_CP089942.1 Protein Homology CDS 3353324 3353842 . + 0 ID=cds-WP_016192972.1;Parent=gene-LU604_RS17995;Dbxref=Genbank:WP_016192972.1;Name=WP_016192972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003834597.1;locus_tag=LU604_RS17995;product=hypothetical protein;protein_id=WP_016192972.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3353839 3354195 . + . ID=gene-LU604_RS18000;Name=LU604_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18000;old_locus_tag=LU604_18000 NZ_CP089942.1 GeneMarkS-2+ CDS 3353839 3354195 . + 0 ID=cds-WP_016192973.1;Parent=gene-LU604_RS18000;Dbxref=Genbank:WP_016192973.1;Name=WP_016192973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS18000;product=hypothetical protein;protein_id=WP_016192973.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3354217 3354914 . - . ID=gene-LU604_RS18005;Name=LU604_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18005;old_locus_tag=LU604_18005 NZ_CP089942.1 Protein Homology CDS 3354653 3354914 . - 0 ID=cds-WP_233481359.1;Parent=gene-LU604_RS18005;Dbxref=Genbank:WP_233481359.1;Name=WP_233481359.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS18005;product=IS1 family transposase;protein_id=WP_233481359.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 3354217 3354653 . - 2 ID=cds-WP_233481359.1;Parent=gene-LU604_RS18005;Dbxref=Genbank:WP_233481359.1;Name=WP_233481359.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS18005;product=IS1 family transposase;protein_id=WP_233481359.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3355270 3355884 . + . ID=gene-LU604_RS18010;Name=LU604_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18010;old_locus_tag=LU604_18010 NZ_CP089942.1 Protein Homology CDS 3355270 3355884 . + 0 ID=cds-WP_233478954.1;Parent=gene-LU604_RS18010;Dbxref=Genbank:WP_233478954.1;Name=WP_233478954.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.2;locus_tag=LU604_RS18010;product=EAL domain-containing protein;protein_id=WP_233478954.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3356037 3356818 . + . ID=gene-LU604_RS18015;Name=LU604_RS18015;end_range=3356818,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18015;old_locus_tag=LU604_18015;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3356037 3356818 . + 0 ID=cds-LU604_RS18015;Parent=gene-LU604_RS18015;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3356818,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS18015;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3356998 3358806 . + . ID=gene-LU604_RS18020;Name=LU604_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18020;old_locus_tag=LU604_18020 NZ_CP089942.1 Protein Homology CDS 3356998 3358806 . + 0 ID=cds-WP_016192977.1;Parent=gene-LU604_RS18020;Dbxref=Genbank:WP_016192977.1;Name=WP_016192977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441008.1;locus_tag=LU604_RS18020;product=extracellular solute-binding protein;protein_id=WP_016192977.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3358818 3359912 . + . ID=gene-LU604_RS18025;Name=LU604_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18025;old_locus_tag=LU604_18025 NZ_CP089942.1 Protein Homology CDS 3358818 3359912 . + 0 ID=cds-WP_016192978.1;Parent=gene-LU604_RS18025;Dbxref=Genbank:WP_016192978.1;Name=WP_016192978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004947087.1;locus_tag=LU604_RS18025;product=microcin C ABC transporter permease YejB;protein_id=WP_016192978.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3359909 3360925 . + . ID=gene-LU604_RS18030;Name=LU604_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18030;old_locus_tag=LU604_18030 NZ_CP089942.1 Protein Homology CDS 3359909 3360925 . + 0 ID=cds-WP_016192979.1;Parent=gene-LU604_RS18030;Dbxref=Genbank:WP_016192979.1;Name=WP_016192979.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170271.1;locus_tag=LU604_RS18030;product=microcin C ABC transporter permease;protein_id=WP_016192979.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3360925 3362508 . + . ID=gene-LU604_RS18035;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=LU604_RS18035;old_locus_tag=LU604_18035 NZ_CP089942.1 Protein Homology CDS 3360925 3362508 . + 0 ID=cds-WP_016192980.1;Parent=gene-LU604_RS18035;Dbxref=Genbank:WP_016192980.1;Name=WP_016192980.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007762625.1;locus_tag=LU604_RS18035;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_016192980.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3362531 3362872 . - . ID=gene-LU604_RS18040;Name=LU604_RS18040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18040;old_locus_tag=LU604_18040;pseudo=true NZ_CP089942.1 Protein Homology CDS 3362531 3362872 . - 0 ID=cds-LU604_RS18040;Parent=gene-LU604_RS18040;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203031.1;locus_tag=LU604_RS18040;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3363134 3364318 . - . ID=gene-LU604_RS18045;Name=LU604_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18045;old_locus_tag=LU604_18045 NZ_CP089942.1 Protein Homology CDS 3363134 3364318 . - 0 ID=cds-WP_040465907.1;Parent=gene-LU604_RS18045;Dbxref=Genbank:WP_040465907.1;Name=WP_040465907.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013026454.1;locus_tag=LU604_RS18045;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_040465907.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3364335 3365063 . - . ID=gene-LU604_RS18050;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=LU604_RS18050;old_locus_tag=LU604_18050 NZ_CP089942.1 Protein Homology CDS 3364335 3365063 . - 0 ID=cds-WP_233480833.1;Parent=gene-LU604_RS18050;Dbxref=Genbank:WP_233480833.1;Name=WP_233480833.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192983.1;locus_tag=LU604_RS18050;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_233480833.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3365270 3367024 . + . ID=gene-LU604_RS18055;Name=LU604_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18055;old_locus_tag=LU604_18055 NZ_CP089942.1 Protein Homology CDS 3365270 3367024 . + 0 ID=cds-WP_016192984.1;Parent=gene-LU604_RS18055;Dbxref=Genbank:WP_016192984.1;Name=WP_016192984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227983.1;locus_tag=LU604_RS18055;product=DEAD/DEAH box helicase;protein_id=WP_016192984.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3367195 3367479 . + . ID=gene-LU604_RS18060;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=LU604_RS18060;old_locus_tag=LU604_18060 NZ_CP089942.1 Protein Homology CDS 3367195 3367479 . + 0 ID=cds-WP_016192985.1;Parent=gene-LU604_RS18060;Dbxref=Genbank:WP_016192985.1;Name=WP_016192985.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441000.1;locus_tag=LU604_RS18060;product=50S ribosomal protein L25;protein_id=WP_016192985.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3367661 3368665 . - . ID=gene-LU604_RS18065;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=LU604_RS18065;old_locus_tag=LU604_18065 NZ_CP089942.1 Protein Homology CDS 3367661 3368665 . - 0 ID=cds-WP_016192986.1;Parent=gene-LU604_RS18065;Dbxref=Genbank:WP_016192986.1;Name=WP_016192986.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203036.1;locus_tag=LU604_RS18065;product=nucleoid-associated protein YejK;protein_id=WP_016192986.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3368826 3369053 . + . ID=gene-LU604_RS18070;Name=LU604_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18070;old_locus_tag=LU604_18070 NZ_CP089942.1 Protein Homology CDS 3368826 3369053 . + 0 ID=cds-WP_016192987.1;Parent=gene-LU604_RS18070;Dbxref=Genbank:WP_016192987.1;Name=WP_016192987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004700534.1;locus_tag=LU604_RS18070;product=YejL family protein;protein_id=WP_016192987.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3369075 3370826 . + . ID=gene-LU604_RS18075;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=LU604_RS18075;old_locus_tag=LU604_18075 NZ_CP089942.1 Protein Homology CDS 3369075 3370826 . + 0 ID=cds-WP_233478955.1;Parent=gene-LU604_RS18075;Dbxref=Genbank:WP_233478955.1;Name=WP_233478955.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009089105.1;locus_tag=LU604_RS18075;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_233478955.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3370921 3370997 . + . ID=gene-LU604_RS18080;Name=LU604_RS18080;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS18080;old_locus_tag=LU604_18080 NZ_CP089942.1 tRNAscan-SE tRNA 3370921 3370997 . + . ID=rna-LU604_RS18080;Parent=gene-LU604_RS18080;anticodon=(pos:3370955..3370957);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS18080;product=tRNA-Pro NZ_CP089942.1 tRNAscan-SE exon 3370921 3370997 . + . ID=exon-LU604_RS18080-1;Parent=rna-LU604_RS18080;anticodon=(pos:3370955..3370957);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS18080;product=tRNA-Pro NZ_CP089942.1 RefSeq gene 3371202 3372476 . + . ID=gene-LU604_RS18085;Name=LU604_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18085;old_locus_tag=LU604_18085 NZ_CP089942.1 Protein Homology CDS 3371202 3372476 . + 0 ID=cds-WP_233481360.1;Parent=gene-LU604_RS18085;Dbxref=Genbank:WP_233481360.1;Name=WP_233481360.1;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324474.1;locus_tag=LU604_RS18085;product=integrase domain-containing protein;protein_id=WP_233481360.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3372469 3372822 . - . ID=gene-LU604_RS18090;Name=LU604_RS18090;end_range=3372822,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18090;old_locus_tag=LU604_18090;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3372469 3372822 . - 0 ID=cds-LU604_RS18090;Parent=gene-LU604_RS18090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=3372822,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611477.1;locus_tag=LU604_RS18090;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3372818 3373295 . + . ID=gene-LU604_RS18095;Name=LU604_RS18095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18095;old_locus_tag=LU604_18095;partial=true;pseudo=true;start_range=.,3372818 NZ_CP089942.1 Protein Homology CDS 3372818 3373295 . + 0 ID=cds-LU604_RS18095;Parent=gene-LU604_RS18095;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU604_RS18095;partial=true;product=transposase;pseudo=true;start_range=.,3372818;transl_table=11 NZ_CP089942.1 RefSeq gene 3373355 3373579 . + . ID=gene-LU604_RS18100;Name=LU604_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18100;old_locus_tag=LU604_18100 NZ_CP089942.1 GeneMarkS-2+ CDS 3373355 3373579 . + 0 ID=cds-WP_152664310.1;Parent=gene-LU604_RS18100;Dbxref=Genbank:WP_152664310.1;Name=WP_152664310.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS18100;product=hypothetical protein;protein_id=WP_152664310.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3373704 3373991 . + . ID=gene-LU604_RS18105;Name=LU604_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18105;old_locus_tag=LU604_18105 NZ_CP089942.1 GeneMarkS-2+ CDS 3373704 3373991 . + 0 ID=cds-WP_016192991.1;Parent=gene-LU604_RS18105;Dbxref=Genbank:WP_016192991.1;Name=WP_016192991.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS18105;product=hypothetical protein;protein_id=WP_016192991.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3374117 3374443 . + . ID=gene-LU604_RS18110;Name=LU604_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18110;old_locus_tag=LU604_18110 NZ_CP089942.1 GeneMarkS-2+ CDS 3374117 3374443 . + 0 ID=cds-WP_152664309.1;Parent=gene-LU604_RS18110;Dbxref=Genbank:WP_152664309.1;Name=WP_152664309.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS18110;product=hypothetical protein;protein_id=WP_152664309.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3374733 3375773 . - . ID=gene-LU604_RS18115;Name=LU604_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18115;old_locus_tag=LU604_18115 NZ_CP089942.1 Protein Homology CDS 3374733 3375773 . - 0 ID=cds-WP_233478553.1-24;Parent=gene-LU604_RS18115;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS18115;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3375853 3377109 . + . ID=gene-LU604_RS18120;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=pseudogene;locus_tag=LU604_RS18120;old_locus_tag=LU604_18120;partial=true;pseudo=true;start_range=.,3375853 NZ_CP089942.1 Protein Homology CDS 3375853 3377109 . + 0 ID=cds-LU604_RS18120;Parent=gene-LU604_RS18120;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212099.1;locus_tag=LU604_RS18120;partial=true;product=type VI secretion system contractile sheath large subunit;pseudo=true;start_range=.,3375853;transl_table=11 NZ_CP089942.1 RefSeq gene 3377119 3377553 . + . ID=gene-LU604_RS18125;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=LU604_RS18125;old_locus_tag=LU604_18125 NZ_CP089942.1 Protein Homology CDS 3377119 3377553 . + 0 ID=cds-WP_233478956.1;Parent=gene-LU604_RS18125;Dbxref=Genbank:WP_233478956.1;Name=WP_233478956.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012776479.1;locus_tag=LU604_RS18125;product=type VI secretion system baseplate subunit TssE;protein_id=WP_233478956.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3377562 3379376 . + . ID=gene-LU604_RS18130;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LU604_RS18130;old_locus_tag=LU604_18130 NZ_CP089942.1 Protein Homology CDS 3377562 3379376 . + 0 ID=cds-WP_233481361.1;Parent=gene-LU604_RS18130;Dbxref=Genbank:WP_233481361.1;Name=WP_233481361.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986879.1;locus_tag=LU604_RS18130;product=type VI secretion system baseplate subunit TssF;protein_id=WP_233481361.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3379340 3380362 . + . ID=gene-LU604_RS18135;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LU604_RS18135;old_locus_tag=LU604_18135 NZ_CP089942.1 Protein Homology CDS 3379340 3380362 . + 0 ID=cds-WP_233478958.1;Parent=gene-LU604_RS18135;Dbxref=Genbank:WP_233478958.1;Name=WP_233478958.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213885.1;locus_tag=LU604_RS18135;product=type VI secretion system baseplate subunit TssG;protein_id=WP_233478958.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3380385 3381674 . + . ID=gene-LU604_RS18140;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=LU604_RS18140;old_locus_tag=LU604_18140 NZ_CP089942.1 Protein Homology CDS 3380385 3381674 . + 0 ID=cds-WP_233478959.1;Parent=gene-LU604_RS18140;Dbxref=Genbank:WP_233478959.1;Name=WP_233478959.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tagH;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986881.1;locus_tag=LU604_RS18140;product=type VI secretion system-associated FHA domain protein TagH;protein_id=WP_233478959.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3381689 3382201 . + . ID=gene-LU604_RS18145;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LU604_RS18145;old_locus_tag=LU604_18145 NZ_CP089942.1 Protein Homology CDS 3381689 3382201 . + 0 ID=cds-WP_233480835.1;Parent=gene-LU604_RS18145;Dbxref=Genbank:WP_233480835.1;Name=WP_233480835.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004241929.1;locus_tag=LU604_RS18145;product=type VI secretion system lipoprotein TssJ;protein_id=WP_233480835.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3382202 3383551 . + . ID=gene-LU604_RS18150;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LU604_RS18150;old_locus_tag=LU604_18150 NZ_CP089942.1 Protein Homology CDS 3382202 3383551 . + 0 ID=cds-WP_233478960.1;Parent=gene-LU604_RS18150;Dbxref=Genbank:WP_233478960.1;Name=WP_233478960.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004241928.1;locus_tag=LU604_RS18150;product=type VI secretion system baseplate subunit TssK;protein_id=WP_233478960.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3383548 3384324 . + . ID=gene-LU604_RS18155;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=LU604_RS18155;old_locus_tag=LU604_18155 NZ_CP089942.1 Protein Homology CDS 3383548 3384324 . + 0 ID=cds-WP_233478961.1;Parent=gene-LU604_RS18155;Dbxref=Genbank:WP_233478961.1;Name=WP_233478961.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004241927.1;locus_tag=LU604_RS18155;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_233478961.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3384321 3386921 . + . ID=gene-LU604_RS18160;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=LU604_RS18160;old_locus_tag=LU604_18160 NZ_CP089942.1 Protein Homology CDS 3384321 3386921 . + 0 ID=cds-WP_233481362.1;Parent=gene-LU604_RS18160;Dbxref=Genbank:WP_233481362.1;Name=WP_233481362.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303453.1;locus_tag=LU604_RS18160;product=type VI secretion system ATPase TssH;protein_id=WP_233481362.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3386918 3387724 . + . ID=gene-LU604_RS18165;Name=LU604_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18165;old_locus_tag=LU604_18165 NZ_CP089942.1 Protein Homology CDS 3386918 3387724 . + 0 ID=cds-WP_233478963.1;Parent=gene-LU604_RS18165;Dbxref=Genbank:WP_233478963.1;Name=WP_233478963.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014950.2;locus_tag=LU604_RS18165;product=helix-turn-helix domain-containing protein;protein_id=WP_233478963.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3387721 3388389 . + . ID=gene-LU604_RS18170;Name=vasI;gbkey=Gene;gene=vasI;gene_biotype=protein_coding;locus_tag=LU604_RS18170;old_locus_tag=LU604_18170 NZ_CP089942.1 Protein Homology CDS 3387721 3388389 . + 0 ID=cds-WP_233478964.1;Parent=gene-LU604_RS18170;Dbxref=Genbank:WP_233478964.1;Name=WP_233478964.1;gbkey=CDS;gene=vasI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686012.1;locus_tag=LU604_RS18170;product=type VI secretion system-associated protein VasI;protein_id=WP_233478964.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3388403 3389824 . + . ID=gene-LU604_RS18175;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=LU604_RS18175;old_locus_tag=LU604_18175 NZ_CP089942.1 Protein Homology CDS 3388403 3389824 . + 0 ID=cds-WP_233478965.1;Parent=gene-LU604_RS18175;Dbxref=Genbank:WP_233478965.1;Name=WP_233478965.1;gbkey=CDS;gene=tssA;inference=COORDINATES: protein motif:HMM:TIGR03362.1;locus_tag=LU604_RS18175;product=type VI secretion system protein TssA;protein_id=WP_233478965.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3389853 3393374 . + . ID=gene-LU604_RS18180;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=LU604_RS18180;old_locus_tag=LU604_18180 NZ_CP089942.1 Protein Homology CDS 3389853 3393374 . + 0 ID=cds-WP_233480836.1;Parent=gene-LU604_RS18180;Dbxref=Genbank:WP_233480836.1;Name=WP_233480836.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssM;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414068.1;locus_tag=LU604_RS18180;product=type VI secretion system membrane subunit TssM;protein_id=WP_233480836.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3393454 3393933 . + . ID=gene-LU604_RS18185;Name=LU604_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18185;old_locus_tag=LU604_18185 NZ_CP089942.1 Protein Homology CDS 3393454 3393933 . + 0 ID=cds-WP_233478966.1;Parent=gene-LU604_RS18185;Dbxref=Genbank:WP_233478966.1;Name=WP_233478966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003837826.1;locus_tag=LU604_RS18185;product=Hcp family type VI secretion system effector;protein_id=WP_233478966.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3394023 3395354 . + . ID=gene-LU604_RS18190;Name=LU604_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18190;old_locus_tag=LU604_18190 NZ_CP089942.1 Protein Homology CDS 3394023 3395354 . + 0 ID=cds-WP_233478967.1;Parent=gene-LU604_RS18190;Dbxref=Genbank:WP_233478967.1;Name=WP_233478967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023902.2;locus_tag=LU604_RS18190;product=type VI secretion system ImpA family N-terminal domain-containing protein;protein_id=WP_233478967.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3395380 3395598 . + . ID=gene-LU604_RS18195;Name=LU604_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18195;old_locus_tag=LU604_18195 NZ_CP089942.1 GeneMarkS-2+ CDS 3395380 3395598 . + 0 ID=cds-WP_233478968.1;Parent=gene-LU604_RS18195;Dbxref=Genbank:WP_233478968.1;Name=WP_233478968.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS18195;product=hypothetical protein;protein_id=WP_233478968.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3395782 3396814 . + . ID=gene-LU604_RS18200;Name=LU604_RS18200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18200;old_locus_tag=LU604_18200;pseudo=true NZ_CP089942.1 Protein Homology CDS 3395782 3396814 . + 0 ID=cds-LU604_RS18200;Parent=gene-LU604_RS18200;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS18200;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3396875 3398455 . - . ID=gene-LU604_RS18205;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=LU604_RS18205;old_locus_tag=LU604_18205 NZ_CP089942.1 Protein Homology CDS 3396875 3398455 . - 0 ID=cds-WP_233478969.1;Parent=gene-LU604_RS18205;Dbxref=Genbank:WP_233478969.1;Name=WP_233478969.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008108317.1;locus_tag=LU604_RS18205;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_233478969.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3398534 3400000 . - . ID=gene-LU604_RS18210;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=LU604_RS18210;old_locus_tag=LU604_18210 NZ_CP089942.1 Protein Homology CDS 3398534 3400000 . - 0 ID=cds-WP_016191559.1;Parent=gene-LU604_RS18210;Dbxref=Genbank:WP_016191559.1;Name=WP_016191559.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=LU604_RS18210;product=IMP dehydrogenase;protein_id=WP_016191559.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3400170 3401579 . + . ID=gene-LU604_RS18215;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=LU604_RS18215;old_locus_tag=LU604_18215 NZ_CP089942.1 Protein Homology CDS 3400170 3401579 . + 0 ID=cds-WP_046372405.1;Parent=gene-LU604_RS18215;Dbxref=Genbank:WP_046372405.1;Name=WP_046372405.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848713.1;locus_tag=LU604_RS18215;product=exodeoxyribonuclease VII large subunit;protein_id=WP_046372405.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3401660 3402281 . + . ID=gene-LU604_RS18220;Name=LU604_RS18220;end_range=3402281,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18220;old_locus_tag=LU604_18220;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3401660 3402281 . + 0 ID=cds-LU604_RS18220;Parent=gene-LU604_RS18220;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004222;end_range=3402281,.;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007370829.1;locus_tag=LU604_RS18220;partial=true;product=M4 family metallopeptidase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3403193 3405625 . - . ID=gene-LU604_RS18225;Name=LU604_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18225;old_locus_tag=LU604_18225 NZ_CP089942.1 Protein Homology CDS 3403193 3405625 . - 0 ID=cds-WP_233478970.1;Parent=gene-LU604_RS18225;Dbxref=Genbank:WP_233478970.1;Name=WP_233478970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016161314.1;locus_tag=LU604_RS18225;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_233478970.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3405993 3406211 . - . ID=gene-LU604_RS18230;Name=LU604_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18230;old_locus_tag=LU604_18230 NZ_CP089942.1 Protein Homology CDS 3405993 3406211 . - 0 ID=cds-WP_016191564.1;Parent=gene-LU604_RS18230;Dbxref=Genbank:WP_016191564.1;Name=WP_016191564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209811.1;locus_tag=LU604_RS18230;product=zinc ribbon domain-containing protein;protein_id=WP_016191564.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3406411 3407895 . - . ID=gene-LU604_RS18235;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=LU604_RS18235;old_locus_tag=LU604_18235 NZ_CP089942.1 Protein Homology CDS 3406411 3407895 . - 0 ID=cds-WP_233478971.1;Parent=gene-LU604_RS18235;Dbxref=Genbank:WP_233478971.1;Name=WP_233478971.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440778.1;locus_tag=LU604_RS18235;product=ribosome biogenesis GTPase Der;protein_id=WP_233478971.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3408112 3409293 . - . ID=gene-LU604_RS18240;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=LU604_RS18240;old_locus_tag=LU604_18240 NZ_CP089942.1 Protein Homology CDS 3408112 3409293 . - 0 ID=cds-WP_233478972.1;Parent=gene-LU604_RS18240;Dbxref=Genbank:WP_233478972.1;Name=WP_233478972.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=LU604_RS18240;product=outer membrane protein assembly factor BamB;protein_id=WP_233478972.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3409340 3409960 . - . ID=gene-LU604_RS18245;Name=LU604_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18245;old_locus_tag=LU604_18245 NZ_CP089942.1 Protein Homology CDS 3409340 3409960 . - 0 ID=cds-WP_016191567.1;Parent=gene-LU604_RS18245;Dbxref=Genbank:WP_016191567.1;Name=WP_016191567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159105.1;locus_tag=LU604_RS18245;product=YfgM family protein;protein_id=WP_016191567.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3409974 3411263 . - . ID=gene-LU604_RS18250;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=LU604_RS18250;old_locus_tag=LU604_18250 NZ_CP089942.1 Protein Homology CDS 3409974 3411263 . - 0 ID=cds-WP_233478973.1;Parent=gene-LU604_RS18250;Dbxref=Genbank:WP_233478973.1;Name=WP_233478973.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191568.1;locus_tag=LU604_RS18250;product=histidine--tRNA ligase;protein_id=WP_233478973.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3411316 3412437 . - . ID=gene-LU604_RS18255;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=LU604_RS18255;old_locus_tag=LU604_18255 NZ_CP089942.1 Protein Homology CDS 3411316 3412437 . - 0 ID=cds-WP_233478974.1;Parent=gene-LU604_RS18255;Dbxref=Genbank:WP_233478974.1;Name=WP_233478974.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311404.1;locus_tag=LU604_RS18255;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_233478974.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3412475 3413476 . - . ID=gene-LU604_RS18260;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=LU604_RS18260;old_locus_tag=LU604_18260 NZ_CP089942.1 Protein Homology CDS 3412475 3413476 . - 0 ID=cds-WP_233478975.1;Parent=gene-LU604_RS18260;Dbxref=Genbank:WP_233478975.1;Name=WP_233478975.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191570.1;locus_tag=LU604_RS18260;product=cytoskeleton protein RodZ;protein_id=WP_233478975.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3413466 3414203 . - . ID=gene-LU604_RS18265;Name=pilW;gbkey=Gene;gene=pilW;gene_biotype=protein_coding;locus_tag=LU604_RS18265;old_locus_tag=LU604_18265 NZ_CP089942.1 Protein Homology CDS 3413466 3414203 . - 0 ID=cds-WP_233478976.1;Parent=gene-LU604_RS18265;Dbxref=Genbank:WP_233478976.1;Name=WP_233478976.1;Ontology_term=GO:0005515;gbkey=CDS;gene=pilW;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191571.1;locus_tag=LU604_RS18265;product=type IV pilus biogenesis/stability protein PilW;protein_id=WP_233478976.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3414286 3415461 . - . ID=gene-LU604_RS18270;Name=LU604_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18270;old_locus_tag=LU604_18270 NZ_CP089942.1 Protein Homology CDS 3414286 3415461 . - 0 ID=cds-WP_016191572.1;Parent=gene-LU604_RS18270;Dbxref=Genbank:WP_016191572.1;Name=WP_016191572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017347778.1;locus_tag=LU604_RS18270;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_016191572.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3415700 3416131 . - . ID=gene-LU604_RS18275;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=LU604_RS18275;old_locus_tag=LU604_18275 NZ_CP089942.1 Protein Homology CDS 3415700 3416131 . - 0 ID=cds-WP_016191573.1;Parent=gene-LU604_RS18275;Dbxref=Genbank:WP_016191573.1;Name=WP_016191573.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=LU604_RS18275;product=nucleoside-diphosphate kinase;protein_id=WP_016191573.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3416578 3417801 . + . ID=gene-LU604_RS18280;Name=LU604_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18280;old_locus_tag=LU604_18280 NZ_CP089942.1 Protein Homology CDS 3416578 3417801 . + 0 ID=cds-WP_233478977.1-4;Parent=gene-LU604_RS18280;Dbxref=Genbank:WP_233478977.1;Name=WP_233478977.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU604_RS18280;product=IS91 family transposase;protein_id=WP_233478977.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3418125 3418834 . - . ID=gene-LU604_RS18285;Name=LU604_RS18285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18285;old_locus_tag=LU604_18285;pseudo=true NZ_CP089942.1 Protein Homology CDS 3418125 3418834 . - 0 ID=cds-LU604_RS18285;Parent=gene-LU604_RS18285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191574.1;locus_tag=LU604_RS18285;product=MgtC/SapB family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3418962 3420176 . - . ID=gene-LU604_RS18290;Name=LU604_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18290;old_locus_tag=LU604_18290 NZ_CP089942.1 Protein Homology CDS 3418962 3420176 . - 0 ID=cds-WP_233478978.1;Parent=gene-LU604_RS18290;Dbxref=Genbank:WP_233478978.1;Name=WP_233478978.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191575.1;locus_tag=LU604_RS18290;product=MFS transporter;protein_id=WP_233478978.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3420191 3421009 . - . ID=gene-LU604_RS18295;Name=LU604_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18295;old_locus_tag=LU604_18295 NZ_CP089942.1 Protein Homology CDS 3420191 3421009 . - 0 ID=cds-WP_233478979.1;Parent=gene-LU604_RS18295;Dbxref=Genbank:WP_233478979.1;Name=WP_233478979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099819.1;locus_tag=LU604_RS18295;product=MBL fold metallo-hydrolase;protein_id=WP_233478979.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3421143 3423332 . + . ID=gene-LU604_RS18300;Name=LU604_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18300;old_locus_tag=LU604_18300 NZ_CP089942.1 Protein Homology CDS 3421143 3423332 . + 0 ID=cds-WP_233478980.1;Parent=gene-LU604_RS18300;Dbxref=Genbank:WP_233478980.1;Name=WP_233478980.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013697.2;locus_tag=LU604_RS18300;product=extracellular solute-binding protein;protein_id=WP_233478980.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3423524 3425881 . - . ID=gene-LU604_RS18305;Name=LU604_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18305;old_locus_tag=LU604_18305 NZ_CP089942.1 Protein Homology CDS 3423524 3425881 . - 0 ID=cds-WP_233481363.1;Parent=gene-LU604_RS18305;Dbxref=Genbank:WP_233481363.1;Name=WP_233481363.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: protein motif:HMM:NF015000.2;locus_tag=LU604_RS18305;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_233481363.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3425868 3427013 . - . ID=gene-LU604_RS18310;Name=LU604_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18310;old_locus_tag=LU604_18310 NZ_CP089942.1 GeneMarkS-2+ CDS 3425868 3427013 . - 0 ID=cds-WP_233481364.1;Parent=gene-LU604_RS18310;Dbxref=Genbank:WP_233481364.1;Name=WP_233481364.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS18310;product=hypothetical protein;protein_id=WP_233481364.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3428064 3428912 . + . ID=gene-LU604_RS18315;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=LU604_RS18315;old_locus_tag=LU604_18315 NZ_CP089942.1 Protein Homology CDS 3428064 3428912 . + 0 ID=cds-WP_233480837.1;Parent=gene-LU604_RS18315;Dbxref=Genbank:WP_233480837.1;Name=WP_233480837.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004853206.1;locus_tag=LU604_RS18315;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_233480837.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3429014 3429793 . - . ID=gene-LU604_RS18320;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=LU604_RS18320;old_locus_tag=LU604_18320 NZ_CP089942.1 Protein Homology CDS 3429014 3429793 . - 0 ID=cds-WP_233478982.1;Parent=gene-LU604_RS18320;Dbxref=Genbank:WP_233478982.1;Name=WP_233478982.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191579.1;locus_tag=LU604_RS18320;product=enhanced serine sensitivity protein SseB;protein_id=WP_233478982.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3429867 3431150 . - . ID=gene-LU604_RS18325;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=LU604_RS18325;old_locus_tag=LU604_18325 NZ_CP089942.1 Protein Homology CDS 3429867 3431150 . - 0 ID=cds-WP_016191580.1;Parent=gene-LU604_RS18325;Dbxref=Genbank:WP_016191580.1;Name=WP_016191580.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013358734.1;locus_tag=LU604_RS18325;product=aminopeptidase PepB;protein_id=WP_016191580.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3431307 3432461 . - . ID=gene-LU604_RS18330;Name=LU604_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18330;old_locus_tag=LU604_18330 NZ_CP089942.1 Protein Homology CDS 3431307 3432461 . - 0 ID=cds-WP_233478983.1;Parent=gene-LU604_RS18330;Dbxref=Genbank:WP_233478983.1;Name=WP_233478983.1;Ontology_term=GO:0044571,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=[2Fe-2S] cluster assembly|0044571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191581.1;locus_tag=LU604_RS18330;product=IscS subfamily cysteine desulfurase;protein_id=WP_233478983.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3432562 3433059 . - . ID=gene-LU604_RS18335;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=LU604_RS18335;old_locus_tag=LU604_18335 NZ_CP089942.1 Protein Homology CDS 3432562 3433059 . - 0 ID=cds-WP_233478984.1;Parent=gene-LU604_RS18335;Dbxref=Genbank:WP_233478984.1;Name=WP_233478984.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009638942.1;locus_tag=LU604_RS18335;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_233478984.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3433224 3433952 . - . ID=gene-LU604_RS18340;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=LU604_RS18340;old_locus_tag=LU604_18340 NZ_CP089942.1 Protein Homology CDS 3433224 3433952 . - 0 ID=cds-WP_016191583.1;Parent=gene-LU604_RS18340;Dbxref=Genbank:WP_016191583.1;Name=WP_016191583.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191583.1;locus_tag=LU604_RS18340;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_016191583.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3434072 3434875 . + . ID=gene-LU604_RS18345;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=LU604_RS18345;old_locus_tag=LU604_18345 NZ_CP089942.1 Protein Homology CDS 3434072 3434875 . + 0 ID=cds-WP_233478985.1;Parent=gene-LU604_RS18345;Dbxref=Genbank:WP_233478985.1;Name=WP_233478985.1;Ontology_term=GO:0046854,GO:0046855,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA,inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311426.1;locus_tag=LU604_RS18345;product=inositol-1-monophosphatase;protein_id=WP_233478985.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3434924 3435919 . - . ID=gene-LU604_RS18350;Name=LU604_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18350;old_locus_tag=LU604_18350 NZ_CP089942.1 Protein Homology CDS 3434924 3435919 . - 0 ID=cds-WP_016191585.1;Parent=gene-LU604_RS18350;Dbxref=Genbank:WP_016191585.1;Name=WP_016191585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803167.1;locus_tag=LU604_RS18350;product=nickel/cobalt transporter;protein_id=WP_016191585.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3435910 3436518 . - . ID=gene-LU604_RS18355;Name=LU604_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18355;old_locus_tag=LU604_18355 NZ_CP089942.1 Protein Homology CDS 3435910 3436518 . - 0 ID=cds-WP_233478986.1;Parent=gene-LU604_RS18355;Dbxref=Genbank:WP_233478986.1;Name=WP_233478986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803166.1;locus_tag=LU604_RS18355;product=DUF1007 family protein;protein_id=WP_233478986.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3436685 3437050 . + . ID=gene-LU604_RS18360;Name=LU604_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18360;old_locus_tag=LU604_18360 NZ_CP089942.1 GeneMarkS-2+ CDS 3436685 3437050 . + 0 ID=cds-WP_232426879.1;Parent=gene-LU604_RS18360;Dbxref=Genbank:WP_232426879.1;Name=WP_232426879.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS18360;product=hypothetical protein;protein_id=WP_232426879.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3437158 3437730 . + . ID=gene-LU604_RS18365;Name=LU604_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18365;old_locus_tag=LU604_18365 NZ_CP089942.1 Protein Homology CDS 3437158 3437730 . + 0 ID=cds-WP_051124386.1;Parent=gene-LU604_RS18365;Dbxref=Genbank:WP_051124386.1;Name=WP_051124386.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF013070.2;locus_tag=LU604_RS18365;product=PRD domain-containing protein;protein_id=WP_051124386.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3437961 3438401 . - . ID=gene-LU604_RS18370;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS18370;old_locus_tag=LU604_18370;partial=true;pseudo=true;start_range=.,3437961 NZ_CP089942.1 Protein Homology CDS 3437961 3438401 . - 0 ID=cds-LU604_RS18370;Parent=gene-LU604_RS18370;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU604_RS18370;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,3437961;transl_table=11 NZ_CP089942.1 RefSeq gene 3438566 3439819 . - . ID=gene-LU604_RS18375;Name=LU604_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18375;old_locus_tag=LU604_18375 NZ_CP089942.1 Protein Homology CDS 3438566 3439819 . - 0 ID=cds-WP_016191589.1;Parent=gene-LU604_RS18375;Dbxref=Genbank:WP_016191589.1;Name=WP_016191589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=LU604_RS18375;product=serine hydroxymethyltransferase;protein_id=WP_016191589.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3439806 3439937 . - . ID=gene-LU604_RS27030;Name=LU604_RS27030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27030 NZ_CP089942.1 GeneMarkS-2+ CDS 3439806 3439937 . - 0 ID=cds-WP_256371751.1;Parent=gene-LU604_RS27030;Dbxref=Genbank:WP_256371751.1;Name=WP_256371751.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS27030;product=hypothetical protein;protein_id=WP_256371751.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3440132 3441310 . + . ID=gene-LU604_RS18380;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=LU604_RS18380;old_locus_tag=LU604_18380 NZ_CP089942.1 Protein Homology CDS 3440132 3441310 . + 0 ID=cds-WP_233478987.1;Parent=gene-LU604_RS18380;Dbxref=Genbank:WP_233478987.1;Name=WP_233478987.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191590.1;locus_tag=LU604_RS18380;product=NO-inducible flavohemoprotein;protein_id=WP_233478987.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3441371 3441709 . - . ID=gene-LU604_RS18385;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=LU604_RS18385;old_locus_tag=LU604_18385 NZ_CP089942.1 Protein Homology CDS 3441371 3441709 . - 0 ID=cds-WP_016191591.1;Parent=gene-LU604_RS18385;Dbxref=Genbank:WP_016191591.1;Name=WP_016191591.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=LU604_RS18385;product=nitrogen regulatory protein P-II;protein_id=WP_016191591.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3441851 3443185 . - . ID=gene-LU604_RS18390;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=LU604_RS18390;old_locus_tag=LU604_18390 NZ_CP089942.1 Protein Homology CDS 3441851 3443185 . - 0 ID=cds-WP_016191592.1;Parent=gene-LU604_RS18390;Dbxref=Genbank:WP_016191592.1;Name=WP_016191592.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295369.1;locus_tag=LU604_RS18390;product=two-component system response regulator GlrR;protein_id=WP_016191592.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3443182 3443910 . - . ID=gene-LU604_RS18395;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=LU604_RS18395;old_locus_tag=LU604_18395 NZ_CP089942.1 Protein Homology CDS 3443182 3443910 . - 0 ID=cds-WP_016191593.1;Parent=gene-LU604_RS18395;Dbxref=Genbank:WP_016191593.1;Name=WP_016191593.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106086.1;locus_tag=LU604_RS18395;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_016191593.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3443907 3445340 . - . ID=gene-LU604_RS18400;Name=LU604_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18400;old_locus_tag=LU604_18400 NZ_CP089942.1 Protein Homology CDS 3443907 3445340 . - 0 ID=cds-WP_016191594.1;Parent=gene-LU604_RS18400;Dbxref=Genbank:WP_016191594.1;Name=WP_016191594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014605263.1;locus_tag=LU604_RS18400;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_016191594.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3446381 3446563 . - . ID=gene-LU604_RS18405;Name=LU604_RS18405;end_range=3446563,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18405;old_locus_tag=LU604_18405;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3446381 3446563 . - 0 ID=cds-LU604_RS18405;Parent=gene-LU604_RS18405;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3446563,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011623097.1;locus_tag=LU604_RS18405;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3446716 3446817 . + . ID=gene-LU604_RS18410;Name=LU604_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18410;old_locus_tag=LU604_18410 NZ_CP089942.1 Protein Homology CDS 3446716 3446817 . + 0 ID=cds-WP_233480838.1;Parent=gene-LU604_RS18410;Dbxref=Genbank:WP_233480838.1;Name=WP_233480838.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021873.2;locus_tag=LU604_RS18410;product=DUF2442 domain-containing protein;protein_id=WP_233480838.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3446857 3447358 . - . ID=gene-LU604_RS18415;Name=LU604_RS18415;end_range=3447358,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18415;old_locus_tag=LU604_18415;partial=true;pseudo=true;start_range=.,3446857 NZ_CP089942.1 Protein Homology CDS 3446857 3447358 . - 0 ID=cds-LU604_RS18415;Parent=gene-LU604_RS18415;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=3447358,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU604_RS18415;partial=true;product=transposase;pseudo=true;start_range=.,3446857;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3447586 3448908 . + . ID=gene-LU604_RS27035;Name=LU604_RS27035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS27035;pseudo=true NZ_CP089942.1 Protein Homology CDS 3447586 3448908 . + 0 ID=cds-LU604_RS27035;Parent=gene-LU604_RS27035;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU604_RS27035;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3448943 3449983 . - . ID=gene-LU604_RS18430;Name=LU604_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18430;old_locus_tag=LU604_18430 NZ_CP089942.1 Protein Homology CDS 3448943 3449983 . - 0 ID=cds-WP_233478989.1-2;Parent=gene-LU604_RS18430;Dbxref=Genbank:WP_233478989.1;Name=WP_233478989.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS18430;product=IS481 family transposase;protein_id=WP_233478989.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3450097 3450240 . - . ID=gene-LU604_RS18435;Name=LU604_RS18435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18435;old_locus_tag=LU604_18435;partial=true;pseudo=true;start_range=.,3450097 NZ_CP089942.1 Protein Homology CDS 3450097 3450240 . - 0 ID=cds-LU604_RS18435;Parent=gene-LU604_RS18435;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU604_RS18435;partial=true;product=transposase domain-containing protein;pseudo=true;start_range=.,3450097;transl_table=11 NZ_CP089942.1 RefSeq gene 3450400 3454287 . - . ID=gene-LU604_RS18440;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=LU604_RS18440;old_locus_tag=LU604_18440 NZ_CP089942.1 Protein Homology CDS 3450400 3454287 . - 0 ID=cds-WP_233478990.1;Parent=gene-LU604_RS18440;Dbxref=Genbank:WP_233478990.1;Name=WP_233478990.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228253.1;locus_tag=LU604_RS18440;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_233478990.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3454558 3456018 . + . ID=gene-LU604_RS18445;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=LU604_RS18445;old_locus_tag=LU604_18445 NZ_CP089942.1 Protein Homology CDS 3454558 3456018 . + 0 ID=cds-WP_016191597.1;Parent=gene-LU604_RS18445;Dbxref=Genbank:WP_016191597.1;Name=WP_016191597.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848623.1;locus_tag=LU604_RS18445;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_016191597.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3456029 3456535 . - . ID=gene-LU604_RS18450;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=LU604_RS18450;old_locus_tag=LU604_18450 NZ_CP089942.1 Protein Homology CDS 3456029 3456535 . - 0 ID=cds-WP_233478991.1;Parent=gene-LU604_RS18450;Dbxref=Genbank:WP_233478991.1;Name=WP_233478991.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191598.1;locus_tag=LU604_RS18450;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_233478991.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3456580 3457248 . - . ID=gene-LU604_RS18455;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=LU604_RS18455;old_locus_tag=LU604_18455 NZ_CP089942.1 Protein Homology CDS 3456580 3457248 . - 0 ID=cds-WP_233478992.1;Parent=gene-LU604_RS18455;Dbxref=Genbank:WP_233478992.1;Name=WP_233478992.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667363.1;locus_tag=LU604_RS18455;product=phosphatidylglycerophosphatase C;protein_id=WP_233478992.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3457457 3458350 . - . ID=gene-LU604_RS18460;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=LU604_RS18460;old_locus_tag=LU604_18460 NZ_CP089942.1 Protein Homology CDS 3457457 3458350 . - 0 ID=cds-WP_016191600.1;Parent=gene-LU604_RS18460;Dbxref=Genbank:WP_016191600.1;Name=WP_016191600.1;Ontology_term=GO:0006040,GO:0009254,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906683.1;locus_tag=LU604_RS18460;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_016191600.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3458543 3459382 . + . ID=gene-LU604_RS18465;Name=LU604_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18465;old_locus_tag=LU604_18465 NZ_CP089942.1 Protein Homology CDS 3458543 3459382 . + 0 ID=cds-WP_233478993.1;Parent=gene-LU604_RS18465;Dbxref=Genbank:WP_233478993.1;Name=WP_233478993.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848617.1;locus_tag=LU604_RS18465;product=MurR/RpiR family transcriptional regulator;protein_id=WP_233478993.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3459647 3460933 . + . ID=gene-LU604_RS18470;Name=LU604_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18470;old_locus_tag=LU604_18470 NZ_CP089942.1 Protein Homology CDS 3459647 3460933 . + 0 ID=cds-WP_016191603.1;Parent=gene-LU604_RS18470;Dbxref=Genbank:WP_016191603.1;Name=WP_016191603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017489846.1;locus_tag=LU604_RS18470;product=O-antigen ligase family protein;protein_id=WP_016191603.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3461234 3462832 . - . ID=gene-LU604_RS18475;Name=LU604_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18475;old_locus_tag=LU604_18475 NZ_CP089942.1 Protein Homology CDS 3461234 3462832 . - 0 ID=cds-WP_016191604.1;Parent=gene-LU604_RS18475;Dbxref=Genbank:WP_016191604.1;Name=WP_016191604.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015054.2;locus_tag=LU604_RS18475;product=lytic polysaccharide monooxygenase;protein_id=WP_016191604.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3463781 3464179 . - . ID=gene-LU604_RS18480;Name=LU604_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18480;old_locus_tag=LU604_18480 NZ_CP089942.1 GeneMarkS-2+ CDS 3463781 3464179 . - 0 ID=cds-WP_016191605.1;Parent=gene-LU604_RS18480;Dbxref=Genbank:WP_016191605.1;Name=WP_016191605.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS18480;product=hypothetical protein;protein_id=WP_016191605.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3464338 3465219 . + . ID=gene-LU604_RS18485;Name=LU604_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18485;old_locus_tag=LU604_18485 NZ_CP089942.1 Protein Homology CDS 3464338 3465219 . + 0 ID=cds-WP_233478994.1;Parent=gene-LU604_RS18485;Dbxref=Genbank:WP_233478994.1;Name=WP_233478994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191606.1;locus_tag=LU604_RS18485;product=hypothetical protein;protein_id=WP_233478994.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3465141 3465708 . + . ID=gene-LU604_RS18490;Name=LU604_RS18490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18490;old_locus_tag=LU604_18490;partial=true;pseudo=true;start_range=.,3465141 NZ_CP089942.1 Protein Homology CDS 3465141 3465708 . + 0 ID=cds-LU604_RS18490;Parent=gene-LU604_RS18490;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611146.1;locus_tag=LU604_RS18490;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,3465141;transl_table=11 NZ_CP089942.1 RefSeq gene 3466011 3466316 . + . ID=gene-LU604_RS18495;Name=LU604_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18495;old_locus_tag=LU604_18495 NZ_CP089942.1 GeneMarkS-2+ CDS 3466011 3466316 . + 0 ID=cds-WP_233478995.1;Parent=gene-LU604_RS18495;Dbxref=Genbank:WP_233478995.1;Name=WP_233478995.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS18495;product=hypothetical protein;protein_id=WP_233478995.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3466332 3466505 . - . ID=gene-LU604_RS18500;Name=LU604_RS18500;end_range=3466505,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18500;old_locus_tag=LU604_18500;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3466332 3466505 . - 0 ID=cds-LU604_RS18500;Parent=gene-LU604_RS18500;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3466505,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343765.1;locus_tag=LU604_RS18500;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3466761 3467204 . + . ID=gene-LU604_RS18505;Name=LU604_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18505;old_locus_tag=LU604_18505 NZ_CP089942.1 Protein Homology CDS 3466761 3467204 . + 0 ID=cds-WP_233478996.1;Parent=gene-LU604_RS18505;Dbxref=Genbank:WP_233478996.1;Name=WP_233478996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215417.1;locus_tag=LU604_RS18505;product=hypothetical protein;protein_id=WP_233478996.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3467236 3467772 . + . ID=gene-LU604_RS18510;Name=LU604_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18510;old_locus_tag=LU604_18510 NZ_CP089942.1 Protein Homology CDS 3467236 3467772 . + 0 ID=cds-WP_233478997.1;Parent=gene-LU604_RS18510;Dbxref=Genbank:WP_233478997.1;Name=WP_233478997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191609.1;locus_tag=LU604_RS18510;product=hypothetical protein;protein_id=WP_233478997.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3467823 3468305 . - . ID=gene-LU604_RS18515;Name=LU604_RS18515;end_range=3468305,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18515;old_locus_tag=LU604_18515;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3467823 3468305 . - 0 ID=cds-LU604_RS18515;Parent=gene-LU604_RS18515;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3468305,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343018.1;locus_tag=LU604_RS18515;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3468296 3468989 . - . ID=gene-LU604_RS18520;Name=LU604_RS18520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18520;old_locus_tag=LU604_18520;partial=true;pseudo=true;start_range=.,3468296 NZ_CP089942.1 Protein Homology CDS 3468296 3468989 . - 0 ID=cds-LU604_RS18520;Parent=gene-LU604_RS18520;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=LU604_RS18520;partial=true;product=transposase;pseudo=true;start_range=.,3468296;transl_table=11 NZ_CP089942.1 RefSeq gene 3469034 3469231 . - . ID=gene-LU604_RS18525;Name=LU604_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18525;old_locus_tag=LU604_18525 NZ_CP089942.1 Protein Homology CDS 3469034 3469231 . - 0 ID=cds-WP_016191612.1;Parent=gene-LU604_RS18525;Dbxref=Genbank:WP_016191612.1;Name=WP_016191612.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: protein motif:HMM:NF018262.2;locus_tag=LU604_RS18525;product=antiterminator Q family protein;protein_id=WP_016191612.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3469644 3471296 . - . ID=gene-LU604_RS18530;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=LU604_RS18530;old_locus_tag=LU604_18530 NZ_CP089942.1 Protein Homology CDS 3469644 3471296 . - 0 ID=cds-WP_016191613.1;Parent=gene-LU604_RS18530;Dbxref=Genbank:WP_016191613.1;Name=WP_016191613.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012883792.1;locus_tag=LU604_RS18530;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_016191613.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3471371 3472570 . + . ID=gene-LU604_RS18535;Name=LU604_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18535;old_locus_tag=LU604_18535 NZ_CP089942.1 Protein Homology CDS 3471371 3472570 . + 0 ID=cds-WP_233478998.1;Parent=gene-LU604_RS18535;Dbxref=Genbank:WP_233478998.1;Name=WP_233478998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191614.1;locus_tag=LU604_RS18535;product=MFS transporter;protein_id=WP_233478998.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3472791 3474473 . + . ID=gene-LU604_RS18540;Name=LU604_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18540;old_locus_tag=LU604_18540 NZ_CP089942.1 Protein Homology CDS 3472791 3474473 . + 0 ID=cds-WP_233478999.1;Parent=gene-LU604_RS18540;Dbxref=Genbank:WP_233478999.1;Name=WP_233478999.1;Ontology_term=GO:0006813,GO:0008324,GO:0015299,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cation transmembrane transporter activity|0008324||IEA,solute:proton antiporter activity|0015299||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201084.1;locus_tag=LU604_RS18540;product=Kef family K(+) transporter;protein_id=WP_233478999.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3474490 3475789 . - . ID=gene-LU604_RS18545;Name=LU604_RS18545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18545;old_locus_tag=LU604_18545;pseudo=true NZ_CP089942.1 Protein Homology CDS 3474490 3475789 . - 0 ID=cds-LU604_RS18545;Parent=gene-LU604_RS18545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225504.1;locus_tag=LU604_RS18545;product=inosine/guanosine kinase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3475871 3476830 . - . ID=gene-LU604_RS18550;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=LU604_RS18550;old_locus_tag=LU604_18550 NZ_CP089942.1 Protein Homology CDS 3475871 3476830 . - 0 ID=cds-WP_233479000.1;Parent=gene-LU604_RS18550;Dbxref=Genbank:WP_233479000.1;Name=WP_233479000.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191617.1;locus_tag=LU604_RS18550;product=ferrochelatase;protein_id=WP_233479000.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3477010 3478031 . - . ID=gene-LU604_RS18555;Name=LU604_RS18555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18555;old_locus_tag=LU604_18555;pseudo=true NZ_CP089942.1 Protein Homology CDS 3477010 3478031 . - 0 ID=cds-LU604_RS18555;Parent=gene-LU604_RS18555;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS18555;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3478136 3478780 . - . ID=gene-LU604_RS18560;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=LU604_RS18560;old_locus_tag=LU604_18560 NZ_CP089942.1 Protein Homology CDS 3478136 3478780 . - 0 ID=cds-WP_233479001.1;Parent=gene-LU604_RS18560;Dbxref=Genbank:WP_233479001.1;Name=WP_233479001.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415007.1;locus_tag=LU604_RS18560;product=adenylate kinase;protein_id=WP_233479001.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3479103 3480983 . - . ID=gene-LU604_RS18565;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=LU604_RS18565;old_locus_tag=LU604_18565 NZ_CP089942.1 Protein Homology CDS 3479103 3480983 . - 0 ID=cds-WP_233479002.1;Parent=gene-LU604_RS18565;Dbxref=Genbank:WP_233479002.1;Name=WP_233479002.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161888.1;locus_tag=LU604_RS18565;product=molecular chaperone HtpG;protein_id=WP_233479002.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3481084 3481689 . - . ID=gene-LU604_RS18570;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=LU604_RS18570;old_locus_tag=LU604_18570 NZ_CP089942.1 Protein Homology CDS 3481084 3481689 . - 0 ID=cds-WP_016191622.1;Parent=gene-LU604_RS18570;Dbxref=Genbank:WP_016191622.1;Name=WP_016191622.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005576.1;locus_tag=LU604_RS18570;product=recombination mediator RecR;protein_id=WP_016191622.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3481689 3482018 . - . ID=gene-LU604_RS18575;Name=LU604_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18575;old_locus_tag=LU604_18575 NZ_CP089942.1 Protein Homology CDS 3481689 3482018 . - 0 ID=cds-WP_016191623.1;Parent=gene-LU604_RS18575;Dbxref=Genbank:WP_016191623.1;Name=WP_016191623.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=LU604_RS18575;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_016191623.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3482062 3484002 . - . ID=gene-LU604_RS18580;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=LU604_RS18580;old_locus_tag=LU604_18580 NZ_CP089942.1 Protein Homology CDS 3482062 3484002 . - 0 ID=cds-WP_233479003.1;Parent=gene-LU604_RS18580;Dbxref=Genbank:WP_233479003.1;Name=WP_233479003.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668849.1;locus_tag=LU604_RS18580;product=DNA polymerase III subunit gamma/tau;protein_id=WP_233479003.1;transl_table=11 NZ_CP089942.1 cmsearch sequence_feature 3482659 3482720 . - . ID=id-LU604_RS18580;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS18580 NZ_CP089942.1 RefSeq gene 3484592 3488020 . + . ID=gene-LU604_RS18600;Name=LU604_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18600;old_locus_tag=LU604_18600 NZ_CP089942.1 GeneMarkS-2+ CDS 3484592 3488020 . + 0 ID=cds-WP_267932722.1;Parent=gene-LU604_RS18600;Dbxref=Genbank:WP_267932722.1;Name=WP_267932722.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS18600;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_267932722.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3488193 3488744 . - . ID=gene-LU604_RS18605;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=LU604_RS18605;old_locus_tag=LU604_18605 NZ_CP089942.1 Protein Homology CDS 3488193 3488744 . - 0 ID=cds-WP_016191626.1;Parent=gene-LU604_RS18605;Dbxref=Genbank:WP_016191626.1;Name=WP_016191626.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=LU604_RS18605;product=adenine phosphoribosyltransferase;protein_id=WP_016191626.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3488949 3489479 . + . ID=gene-LU604_RS18610;Name=LU604_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18610;old_locus_tag=LU604_18610 NZ_CP089942.1 Protein Homology CDS 3488949 3489479 . + 0 ID=cds-WP_016191627.1;Parent=gene-LU604_RS18610;Dbxref=Genbank:WP_016191627.1;Name=WP_016191627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668852.1;locus_tag=LU604_RS18610;product=primosomal replication protein;protein_id=WP_016191627.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3489717 3490553 . + . ID=gene-LU604_RS18615;Name=LU604_RS18615;end_range=3490553,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18615;old_locus_tag=LU604_18615;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3489717 3490553 . + 0 ID=cds-LU604_RS18615;Parent=gene-LU604_RS18615;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3490553,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005054087.1;locus_tag=LU604_RS18615;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3490637 3491632 . + . ID=gene-LU604_RS18620;Name=LU604_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18620;old_locus_tag=LU604_18620 NZ_CP089942.1 Protein Homology CDS 3490637 3491632 . + 0 ID=cds-WP_233479006.1;Parent=gene-LU604_RS18620;Dbxref=Genbank:WP_233479006.1;Name=WP_233479006.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU604_RS18620;product=IS91 family transposase;protein_id=WP_233479006.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3491559 3491849 . + . ID=gene-LU604_RS18625;Name=LU604_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18625;old_locus_tag=LU604_18625 NZ_CP089942.1 GeneMarkS-2+ CDS 3491559 3491849 . + 0 ID=cds-WP_233481367.1;Parent=gene-LU604_RS18625;Dbxref=Genbank:WP_233481367.1;Name=WP_233481367.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS18625;product=hypothetical protein;protein_id=WP_233481367.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3491992 3492324 . + . ID=gene-LU604_RS18630;Name=LU604_RS18630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18630;old_locus_tag=LU604_18630;partial=true;pseudo=true;start_range=.,3491992 NZ_CP089942.1 Protein Homology CDS 3491992 3492324 . + 0 ID=cds-LU604_RS18630;Parent=gene-LU604_RS18630;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012197853.1;locus_tag=LU604_RS18630;partial=true;product=transposase;pseudo=true;start_range=.,3491992;transl_table=11 NZ_CP089942.1 RefSeq gene 3492485 3492640 . + . ID=gene-LU604_RS18635;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=LU604_RS18635;old_locus_tag=LU604_18635 NZ_CP089942.1 Protein Homology CDS 3492485 3492640 . + 0 ID=cds-WP_016191632.1;Parent=gene-LU604_RS18635;Dbxref=Genbank:WP_016191632.1;Name=WP_016191632.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240373.1;locus_tag=LU604_RS18635;product=pleiotropic regulatory protein RsmS;protein_id=WP_016191632.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3492637 3493278 . - . ID=gene-LU604_RS18640;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=LU604_RS18640;old_locus_tag=LU604_18640 NZ_CP089942.1 Protein Homology CDS 3492637 3493278 . - 0 ID=cds-WP_233479008.1;Parent=gene-LU604_RS18640;Dbxref=Genbank:WP_233479008.1;Name=WP_233479008.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191633.1;locus_tag=LU604_RS18640;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_233479008.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3493418 3494602 . + . ID=gene-LU604_RS18645;Name=LU604_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18645;old_locus_tag=LU604_18645 NZ_CP089942.1 Protein Homology CDS 3493418 3494602 . + 0 ID=cds-WP_233479009.1;Parent=gene-LU604_RS18645;Dbxref=Genbank:WP_233479009.1;Name=WP_233479009.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201065.1;locus_tag=LU604_RS18645;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_233479009.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3494619 3497732 . + . ID=gene-LU604_RS18650;Name=LU604_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18650;old_locus_tag=LU604_18650 NZ_CP089942.1 Protein Homology CDS 3494619 3497732 . + 0 ID=cds-WP_233479010.1;Parent=gene-LU604_RS18650;Dbxref=Genbank:WP_233479010.1;Name=WP_233479010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191635.1;locus_tag=LU604_RS18650;product=efflux RND transporter permease subunit;protein_id=WP_233479010.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3497934 3498191 . + . ID=gene-LU604_RS18655;Name=LU604_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18655;old_locus_tag=LU604_18655 NZ_CP089942.1 Protein Homology CDS 3497934 3498191 . + 0 ID=cds-WP_233479011.1;Parent=gene-LU604_RS18655;Dbxref=Genbank:WP_233479011.1;Name=WP_233479011.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005564.1;locus_tag=LU604_RS18655;product=type B 50S ribosomal protein L31;protein_id=WP_233479011.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3498204 3498347 . + . ID=gene-LU604_RS18660;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=LU604_RS18660;old_locus_tag=LU604_18660 NZ_CP089942.1 Protein Homology CDS 3498204 3498347 . + 0 ID=cds-WP_016191637.1;Parent=gene-LU604_RS18660;Dbxref=Genbank:WP_016191637.1;Name=WP_016191637.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668859.1;locus_tag=LU604_RS18660;product=type B 50S ribosomal protein L36;protein_id=WP_016191637.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3498471 3499510 . + . ID=gene-LU604_RS18665;Name=LU604_RS18665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18665;old_locus_tag=LU604_18665;pseudo=true NZ_CP089942.1 Protein Homology CDS 3498471 3499510 . + 0 ID=cds-LU604_RS18665;Parent=gene-LU604_RS18665;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS18665;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3499671 3500402 . + . ID=gene-LU604_RS18670;Name=LU604_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18670;old_locus_tag=LU604_18670 NZ_CP089942.1 GeneMarkS-2+ CDS 3499671 3500402 . + 0 ID=cds-WP_016191638.1;Parent=gene-LU604_RS18670;Dbxref=Genbank:WP_016191638.1;Name=WP_016191638.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS18670;product=hypothetical protein;protein_id=WP_016191638.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3500353 3500772 . + . ID=gene-LU604_RS18675;Name=LU604_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18675;old_locus_tag=LU604_18675 NZ_CP089942.1 GeneMarkS-2+ CDS 3500353 3500772 . + 0 ID=cds-WP_233479012.1;Parent=gene-LU604_RS18675;Dbxref=Genbank:WP_233479012.1;Name=WP_233479012.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS18675;product=hypothetical protein;protein_id=WP_233479012.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3501031 3501168 . + . ID=gene-LU604_RS18680;Name=LU604_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18680;old_locus_tag=LU604_18680 NZ_CP089942.1 GeneMarkS-2+ CDS 3501031 3501168 . + 0 ID=cds-WP_157275241.1;Parent=gene-LU604_RS18680;Dbxref=Genbank:WP_157275241.1;Name=WP_157275241.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS18680;product=hypothetical protein;protein_id=WP_157275241.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3501481 3502520 . + . ID=gene-LU604_RS18685;Name=LU604_RS18685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18685;old_locus_tag=LU604_18685;pseudo=true NZ_CP089942.1 Protein Homology CDS 3501481 3502520 . + 0 ID=cds-LU604_RS18685;Parent=gene-LU604_RS18685;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS18685;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3502763 3503641 . - . ID=gene-LU604_RS18690;Name=LU604_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18690;old_locus_tag=LU604_18690 NZ_CP089942.1 Protein Homology CDS 3502763 3503641 . - 0 ID=cds-WP_016191640.1;Parent=gene-LU604_RS18690;Dbxref=Genbank:WP_016191640.1;Name=WP_016191640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891854.1;locus_tag=LU604_RS18690;product=metal ABC transporter substrate-binding protein;protein_id=WP_016191640.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3503638 3504504 . - . ID=gene-LU604_RS18695;Name=LU604_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18695;old_locus_tag=LU604_18695 NZ_CP089942.1 Protein Homology CDS 3503638 3504504 . - 0 ID=cds-WP_040465679.1;Parent=gene-LU604_RS18695;Dbxref=Genbank:WP_040465679.1;Name=WP_040465679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201061.1;locus_tag=LU604_RS18695;product=metal ABC transporter permease;protein_id=WP_040465679.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3504507 3505193 . - . ID=gene-LU604_RS18700;Name=LU604_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18700;old_locus_tag=LU604_18700 NZ_CP089942.1 Protein Homology CDS 3504507 3505193 . - 0 ID=cds-WP_233479013.1;Parent=gene-LU604_RS18700;Dbxref=Genbank:WP_233479013.1;Name=WP_233479013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201060.1;locus_tag=LU604_RS18700;product=ABC transporter ATP-binding protein;protein_id=WP_233479013.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3506088 3506468 . + . ID=gene-LU604_RS18705;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=LU604_RS18705;old_locus_tag=LU604_18705 NZ_CP089942.1 Protein Homology CDS 3506088 3506468 . + 0 ID=cds-WP_233479014.1;Parent=gene-LU604_RS18705;Dbxref=Genbank:WP_233479014.1;Name=WP_233479014.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013508152.1;locus_tag=LU604_RS18705;product=Hha toxicity modulator TomB;protein_id=WP_233479014.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3506494 3506712 . + . ID=gene-LU604_RS18710;Name=LU604_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18710;old_locus_tag=LU604_18710 NZ_CP089942.1 Protein Homology CDS 3506494 3506712 . + 0 ID=cds-WP_016191644.1;Parent=gene-LU604_RS18710;Dbxref=Genbank:WP_016191644.1;Name=WP_016191644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=LU604_RS18710;product=HHA domain-containing protein;protein_id=WP_016191644.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3506752 3506848 . - . ID=gene-LU604_RS18715;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=LU604_RS18715;old_locus_tag=LU604_18715 NZ_CP089942.1 cmsearch SRP_RNA 3506752 3506848 . - . ID=rna-LU604_RS18715;Parent=gene-LU604_RS18715;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS18715;product=signal recognition particle sRNA small type NZ_CP089942.1 cmsearch exon 3506752 3506848 . - . ID=exon-LU604_RS18715-1;Parent=rna-LU604_RS18715;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS18715;product=signal recognition particle sRNA small type NZ_CP089942.1 RefSeq gene 3507067 3507414 . + . ID=gene-LU604_RS18720;Name=LU604_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18720;old_locus_tag=LU604_18720 NZ_CP089942.1 Protein Homology CDS 3507067 3507414 . + 0 ID=cds-WP_016191645.1;Parent=gene-LU604_RS18720;Dbxref=Genbank:WP_016191645.1;Name=WP_016191645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003850460.1;locus_tag=LU604_RS18720;product=MGMT family protein;protein_id=WP_016191645.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3507374 3507925 . - . ID=gene-LU604_RS18725;Name=LU604_RS18725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18725;old_locus_tag=LU604_18725;pseudo=true NZ_CP089942.1 Protein Homology CDS 3507374 3507925 . - 0 ID=cds-LU604_RS18725;Parent=gene-LU604_RS18725;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008924908.1;locus_tag=LU604_RS18725;product=YbaY family lipoprotein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3508186 3509025 . + . ID=gene-LU604_RS18730;Name=LU604_RS18730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18730;old_locus_tag=LU604_18730;pseudo=true NZ_CP089942.1 Protein Homology CDS 3508186 3509025 . + 0 ID=cds-LU604_RS18730;Parent=gene-LU604_RS18730;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804789.1;locus_tag=LU604_RS18730;product=thioesterase family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3509087 3510391 . - . ID=gene-LU604_RS18735;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=LU604_RS18735;old_locus_tag=LU604_18735 NZ_CP089942.1 Protein Homology CDS 3509087 3510391 . - 0 ID=cds-WP_233481368.1;Parent=gene-LU604_RS18735;Dbxref=Genbank:WP_233481368.1;Name=WP_233481368.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium transmembrane transporter activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543632.1;locus_tag=LU604_RS18735;product=ammonium transporter AmtB;protein_id=WP_233481368.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3510407 3510745 . - . ID=gene-LU604_RS18740;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=LU604_RS18740;old_locus_tag=LU604_18740 NZ_CP089942.1 Protein Homology CDS 3510407 3510745 . - 0 ID=cds-WP_016191649.1;Parent=gene-LU604_RS18740;Dbxref=Genbank:WP_016191649.1;Name=WP_016191649.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367937.1;locus_tag=LU604_RS18740;product=P-II family nitrogen regulator;protein_id=WP_016191649.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3510989 3512767 . - . ID=gene-LU604_RS18745;Name=LU604_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18745;old_locus_tag=LU604_18745 NZ_CP089942.1 Protein Homology CDS 3510989 3512767 . - 0 ID=cds-WP_016191650.1;Parent=gene-LU604_RS18745;Dbxref=Genbank:WP_016191650.1;Name=WP_016191650.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668867.1;locus_tag=LU604_RS18745;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_016191650.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3512760 3514529 . - . ID=gene-LU604_RS18750;Name=LU604_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18750;old_locus_tag=LU604_18750 NZ_CP089942.1 Protein Homology CDS 3512760 3514529 . - 0 ID=cds-WP_233479015.1;Parent=gene-LU604_RS18750;Dbxref=Genbank:WP_233479015.1;Name=WP_233479015.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010671214.1;locus_tag=LU604_RS18750;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_233479015.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3514563 3514829 . - . ID=gene-LU604_RS18755;Name=LU604_RS18755;end_range=3514829,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18755;old_locus_tag=LU604_18755;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3514563 3514829 . - 0 ID=cds-LU604_RS18755;Parent=gene-LU604_RS18755;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3514829,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017371436.1;locus_tag=LU604_RS18755;partial=true;product=Lrp/AsnC family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3515007 3515261 . + . ID=gene-LU604_RS18760;Name=LU604_RS18760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18760;old_locus_tag=LU604_18760;partial=true;pseudo=true;start_range=.,3515007 NZ_CP089942.1 Protein Homology CDS 3515007 3515261 . + 0 ID=cds-LU604_RS18760;Parent=gene-LU604_RS18760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611902.1;locus_tag=LU604_RS18760;partial=true;product=ISNCY family transposase;pseudo=true;start_range=.,3515007;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3515339 3515449 . - . ID=gene-LU604_RS18765;Name=LU604_RS18765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18765;old_locus_tag=LU604_18765;partial=true;pseudo=true;start_range=.,3515339 NZ_CP089942.1 Protein Homology CDS 3515339 3515449 . - 0 ID=cds-LU604_RS18765;Parent=gene-LU604_RS18765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168996.1;locus_tag=LU604_RS18765;partial=true;product=winged helix-turn-helix transcriptional regulator;pseudo=true;start_range=.,3515339;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3515658 3516653 . + . ID=gene-LU604_RS18770;Name=LU604_RS18770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18770;old_locus_tag=LU604_18770;pseudo=true NZ_CP089942.1 Protein Homology CDS 3515658 3516653 . + 0 ID=cds-LU604_RS18770;Parent=gene-LU604_RS18770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003831022.1;locus_tag=LU604_RS18770;product=PLP-dependent cysteine synthase family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3516723 3517418 . + . ID=gene-LU604_RS18775;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=LU604_RS18775;old_locus_tag=LU604_18775 NZ_CP089942.1 Protein Homology CDS 3516723 3517418 . + 0 ID=cds-WP_233479016.1;Parent=gene-LU604_RS18775;Dbxref=Genbank:WP_233479016.1;Name=WP_233479016.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003850483.1;locus_tag=LU604_RS18775;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_233479016.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3517410 3517805 . - . ID=gene-LU604_RS18780;Name=LU604_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18780;old_locus_tag=LU604_18780 NZ_CP089942.1 Protein Homology CDS 3517410 3517805 . - 0 ID=cds-WP_016191658.1;Parent=gene-LU604_RS18780;Dbxref=Genbank:WP_016191658.1;Name=WP_016191658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356998.1;locus_tag=LU604_RS18780;product=thioesterase family protein;protein_id=WP_016191658.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3517913 3518308 . - . ID=gene-LU604_RS18785;Name=LU604_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18785;old_locus_tag=LU604_18785 NZ_CP089942.1 Protein Homology CDS 3517913 3518308 . - 0 ID=cds-WP_040465660.1;Parent=gene-LU604_RS18785;Dbxref=Genbank:WP_040465660.1;Name=WP_040465660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800943.1;locus_tag=LU604_RS18785;product=helix-hairpin-helix domain-containing protein;protein_id=WP_040465660.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3518433 3520304 . - . ID=gene-LU604_RS18790;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=LU604_RS18790;old_locus_tag=LU604_18790 NZ_CP089942.1 Protein Homology CDS 3518433 3520304 . - 0 ID=cds-WP_233480839.1;Parent=gene-LU604_RS18790;Dbxref=Genbank:WP_233480839.1;Name=WP_233480839.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168991.1;locus_tag=LU604_RS18790;product=peptidylprolyl isomerase;protein_id=WP_233480839.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3520506 3520778 . - . ID=gene-LU604_RS18795;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=LU604_RS18795;old_locus_tag=LU604_18795 NZ_CP089942.1 Protein Homology CDS 3520506 3520778 . - 0 ID=cds-WP_016191661.1;Parent=gene-LU604_RS18795;Dbxref=Genbank:WP_016191661.1;Name=WP_016191661.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308521.1;locus_tag=LU604_RS18795;product=DNA-binding protein HU-beta;protein_id=WP_016191661.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3520998 3523352 . - . ID=gene-LU604_RS18800;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=LU604_RS18800;old_locus_tag=LU604_18800 NZ_CP089942.1 Protein Homology CDS 3520998 3523352 . - 0 ID=cds-WP_016191662.1;Parent=gene-LU604_RS18800;Dbxref=Genbank:WP_016191662.1;Name=WP_016191662.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=LU604_RS18800;product=endopeptidase La;protein_id=WP_016191662.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3523546 3524820 . - . ID=gene-LU604_RS18805;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=LU604_RS18805;old_locus_tag=LU604_18805 NZ_CP089942.1 Protein Homology CDS 3523546 3524820 . - 0 ID=cds-WP_233479017.1;Parent=gene-LU604_RS18805;Dbxref=Genbank:WP_233479017.1;Name=WP_233479017.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0051082,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=LU604_RS18805;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_233479017.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3524939 3525556 . - . ID=gene-LU604_RS18810;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=LU604_RS18810;old_locus_tag=LU604_18810 NZ_CP089942.1 Protein Homology CDS 3524939 3525556 . - 0 ID=cds-WP_233479018.1;Parent=gene-LU604_RS18810;Dbxref=Genbank:WP_233479018.1;Name=WP_233479018.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006319787.1;locus_tag=LU604_RS18810;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_233479018.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3525790 3527094 . - . ID=gene-LU604_RS18815;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=LU604_RS18815;old_locus_tag=LU604_18815 NZ_CP089942.1 Protein Homology CDS 3525790 3527094 . - 0 ID=cds-WP_233481369.1;Parent=gene-LU604_RS18815;Dbxref=Genbank:WP_233481369.1;Name=WP_233481369.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004707578.1;locus_tag=LU604_RS18815;product=trigger factor;protein_id=WP_233481369.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3527407 3528732 . - . ID=gene-LU604_RS18820;Name=LU604_RS18820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18820;old_locus_tag=LU604_18820;pseudo=true NZ_CP089942.1 Protein Homology CDS 3527407 3528732 . - 0 ID=cds-LU604_RS18820;Parent=gene-LU604_RS18820;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU604_RS18820;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3528848 3529162 . - . ID=gene-LU604_RS18825;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=LU604_RS18825;old_locus_tag=LU604_18825 NZ_CP089942.1 Protein Homology CDS 3528848 3529162 . - 0 ID=cds-WP_233479019.1;Parent=gene-LU604_RS18825;Dbxref=Genbank:WP_233479019.1;Name=WP_233479019.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117961.1;locus_tag=LU604_RS18825;product=transcriptional regulator BolA;protein_id=WP_233479019.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3529330 3529908 . + . ID=gene-LU604_RS18830;Name=LU604_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18830;old_locus_tag=LU604_18830 NZ_CP089942.1 Protein Homology CDS 3529330 3529908 . + 0 ID=cds-WP_016190681.1;Parent=gene-LU604_RS18830;Dbxref=Genbank:WP_016190681.1;Name=WP_016190681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208646.1;locus_tag=LU604_RS18830;product=lipoprotein;protein_id=WP_016190681.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3530043 3531509 . + . ID=gene-LU604_RS18835;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=LU604_RS18835;old_locus_tag=LU604_18835 NZ_CP089942.1 Protein Homology CDS 3530043 3531509 . + 0 ID=cds-WP_233480840.1;Parent=gene-LU604_RS18835;Dbxref=Genbank:WP_233480840.1;Name=WP_233480840.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190680.1;locus_tag=LU604_RS18835;product=muropeptide MFS transporter AmpG;protein_id=WP_233480840.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3532308 3533234 . + . ID=gene-LU604_RS18840;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=LU604_RS18840;old_locus_tag=LU604_18840 NZ_CP089942.1 Protein Homology CDS 3532308 3533234 . + 0 ID=cds-WP_233479020.1;Parent=gene-LU604_RS18840;Dbxref=Genbank:WP_233479020.1;Name=WP_233479020.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024881.1;locus_tag=LU604_RS18840;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_233479020.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3533239 3535230 . + . ID=gene-LU604_RS18845;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=LU604_RS18845;old_locus_tag=LU604_18845 NZ_CP089942.1 Protein Homology CDS 3533239 3535230 . + 0 ID=cds-WP_016190678.1;Parent=gene-LU604_RS18845;Dbxref=Genbank:WP_016190678.1;Name=WP_016190678.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225433.1;locus_tag=LU604_RS18845;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_016190678.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3535220 3535834 . + . ID=gene-LU604_RS18850;Name=LU604_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18850;old_locus_tag=LU604_18850 NZ_CP089942.1 Protein Homology CDS 3535220 3535834 . + 0 ID=cds-WP_016190677.1;Parent=gene-LU604_RS18850;Dbxref=Genbank:WP_016190677.1;Name=WP_016190677.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=LU604_RS18850;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_016190677.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3535834 3536163 . + . ID=gene-LU604_RS18855;Name=LU604_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18855;old_locus_tag=LU604_18855 NZ_CP089942.1 Protein Homology CDS 3535834 3536163 . + 0 ID=cds-WP_016190676.1;Parent=gene-LU604_RS18855;Dbxref=Genbank:WP_016190676.1;Name=WP_016190676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024878.1;locus_tag=LU604_RS18855;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_016190676.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3536178 3537065 . + . ID=gene-LU604_RS18860;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=LU604_RS18860;old_locus_tag=LU604_18860 NZ_CP089942.1 Protein Homology CDS 3536178 3537065 . + 0 ID=cds-WP_233480841.1;Parent=gene-LU604_RS18860;Dbxref=Genbank:WP_233480841.1;Name=WP_233480841.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007705361.1;locus_tag=LU604_RS18860;product=heme o synthase;protein_id=WP_233480841.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3537305 3538666 . + . ID=gene-LU604_RS18865;Name=LU604_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18865;old_locus_tag=LU604_18865 NZ_CP089942.1 Protein Homology CDS 3537305 3538666 . + 0 ID=cds-WP_016190674.1;Parent=gene-LU604_RS18865;Dbxref=Genbank:WP_016190674.1;Name=WP_016190674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010616827.1;locus_tag=LU604_RS18865;product=MFS transporter;protein_id=WP_016190674.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3538733 3539455 . - . ID=gene-LU604_RS18870;Name=LU604_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18870;old_locus_tag=LU604_18870 NZ_CP089942.1 Protein Homology CDS 3538733 3539455 . - 0 ID=cds-WP_233479021.1;Parent=gene-LU604_RS18870;Dbxref=Genbank:WP_233479021.1;Name=WP_233479021.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=LU604_RS18870;product=LysR substrate-binding domain-containing protein;protein_id=WP_233479021.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3539571 3540161 . + . ID=gene-LU604_RS18875;Name=LU604_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18875;old_locus_tag=LU604_18875 NZ_CP089942.1 Protein Homology CDS 3539571 3540161 . + 0 ID=cds-WP_233481370.1;Parent=gene-LU604_RS18875;Dbxref=Genbank:WP_233481370.1;Name=WP_233481370.1;Ontology_term=GO:0009055,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: protein motif:HMM:NF012402.2;locus_tag=LU604_RS18875;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_233481370.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3540173 3540679 . - . ID=gene-LU604_RS18880;Name=LU604_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18880;old_locus_tag=LU604_18880 NZ_CP089942.1 Protein Homology CDS 3540173 3540679 . - 0 ID=cds-WP_233479022.1;Parent=gene-LU604_RS18880;Dbxref=Genbank:WP_233479022.1;Name=WP_233479022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008108765.1;locus_tag=LU604_RS18880;product=DUF1543 domain-containing protein;protein_id=WP_233479022.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3540693 3541334 . - . ID=gene-LU604_RS18885;Name=LU604_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18885;old_locus_tag=LU604_18885 NZ_CP089942.1 Protein Homology CDS 3540693 3541334 . - 0 ID=cds-WP_016190670.1;Parent=gene-LU604_RS18885;Dbxref=Genbank:WP_016190670.1;Name=WP_016190670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017490373.1;locus_tag=LU604_RS18885;product=LysE family translocator;protein_id=WP_016190670.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3541331 3542065 . - . ID=gene-LU604_RS18890;Name=LU604_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18890;old_locus_tag=LU604_18890 NZ_CP089942.1 Protein Homology CDS 3541331 3542065 . - 0 ID=cds-WP_233481371.1;Parent=gene-LU604_RS18890;Dbxref=Genbank:WP_233481371.1;Name=WP_233481371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017490372.1;locus_tag=LU604_RS18890;product=YqcI/YcgG family protein;protein_id=WP_233481371.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3542231 3543136 . + . ID=gene-LU604_RS18895;Name=LU604_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18895;old_locus_tag=LU604_18895 NZ_CP089942.1 Protein Homology CDS 3542231 3543136 . + 0 ID=cds-WP_233479023.1;Parent=gene-LU604_RS18895;Dbxref=Genbank:WP_233479023.1;Name=WP_233479023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190668.1;locus_tag=LU604_RS18895;product=LysR substrate-binding domain-containing protein;protein_id=WP_233479023.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3543349 3544659 . + . ID=gene-LU604_RS18900;Name=hutW;gbkey=Gene;gene=hutW;gene_biotype=protein_coding;locus_tag=LU604_RS18900;old_locus_tag=LU604_18900 NZ_CP089942.1 Protein Homology CDS 3543349 3544659 . + 0 ID=cds-WP_016190667.1;Parent=gene-LU604_RS18900;Dbxref=Genbank:WP_016190667.1;Name=WP_016190667.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;gene=hutW;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010295340.1;locus_tag=LU604_RS18900;product=heme anaerobic degradation radical SAM methyltransferase ChuW/HutW;protein_id=WP_016190667.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3544640 3545134 . + . ID=gene-LU604_RS18905;Name=hutX;gbkey=Gene;gene=hutX;gene_biotype=protein_coding;locus_tag=LU604_RS18905;old_locus_tag=LU604_18905 NZ_CP089942.1 Protein Homology CDS 3544640 3545134 . + 0 ID=cds-WP_016190666.1;Parent=gene-LU604_RS18905;Dbxref=Genbank:WP_016190666.1;Name=WP_016190666.1;gbkey=CDS;gene=hutX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014416650.1;locus_tag=LU604_RS18905;product=heme utilization cystosolic carrier protein HutX;protein_id=WP_016190666.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3545134 3545757 . + . ID=gene-LU604_RS18910;Name=LU604_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18910;old_locus_tag=LU604_18910 NZ_CP089942.1 Protein Homology CDS 3545134 3545757 . + 0 ID=cds-WP_233479025.1;Parent=gene-LU604_RS18910;Dbxref=Genbank:WP_233479025.1;Name=WP_233479025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190665.1;locus_tag=LU604_RS18910;product=NAD(P)H-binding protein;protein_id=WP_233479025.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3545806 3546297 . - . ID=gene-LU604_RS18915;Name=LU604_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18915;old_locus_tag=LU604_18915 NZ_CP089942.1 Protein Homology CDS 3545806 3546297 . - 0 ID=cds-WP_016190664.1;Parent=gene-LU604_RS18915;Dbxref=Genbank:WP_016190664.1;Name=WP_016190664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225419.1;locus_tag=LU604_RS18915;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_016190664.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3546473 3547393 . + . ID=gene-LU604_RS18920;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=LU604_RS18920;old_locus_tag=LU604_18920 NZ_CP089942.1 Protein Homology CDS 3546473 3547393 . + 0 ID=cds-WP_016190663.1;Parent=gene-LU604_RS18920;Dbxref=Genbank:WP_016190663.1;Name=WP_016190663.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543610.1;locus_tag=LU604_RS18920;product=2-dehydropantoate 2-reductase;protein_id=WP_016190663.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3547353 3547943 . + . ID=gene-LU604_RS18925;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=LU604_RS18925;old_locus_tag=LU604_18925 NZ_CP089942.1 Protein Homology CDS 3547353 3547943 . + 0 ID=cds-WP_233481647.1;Parent=gene-LU604_RS18925;Dbxref=Genbank:WP_233481647.1;Name=WP_233481647.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859085.1;locus_tag=LU604_RS18925;product=protein deglycase YajL;protein_id=WP_233481647.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3548051 3549259 . + . ID=gene-LU604_RS18930;Name=LU604_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18930;old_locus_tag=LU604_18930 NZ_CP089942.1 Protein Homology CDS 3548051 3549259 . + 0 ID=cds-WP_233479026.1;Parent=gene-LU604_RS18930;Dbxref=Genbank:WP_233479026.1;Name=WP_233479026.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS18930;product=IS256 family transposase;protein_id=WP_233479026.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3549463 3550588 . + . ID=gene-LU604_RS18935;Name=LU604_RS18935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18935;old_locus_tag=LU604_18935;pseudo=true NZ_CP089942.1 Protein Homology CDS 3549463 3550588 . + 0 ID=cds-LU604_RS18935;Parent=gene-LU604_RS18935;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611788.1;locus_tag=LU604_RS18935;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3550652 3551254 . - . ID=gene-LU604_RS18940;Name=LU604_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18940;old_locus_tag=LU604_18940 NZ_CP089942.1 Protein Homology CDS 3550652 3551254 . - 0 ID=cds-WP_016190660.1;Parent=gene-LU604_RS18940;Dbxref=Genbank:WP_016190660.1;Name=WP_016190660.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=LU604_RS18940;product=peroxiredoxin C;protein_id=WP_016190660.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3551450 3552031 . - . ID=gene-LU604_RS18945;Name=LU604_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18945;old_locus_tag=LU604_18945 NZ_CP089942.1 Protein Homology CDS 3551450 3552031 . - 0 ID=cds-WP_233479027.1;Parent=gene-LU604_RS18945;Dbxref=Genbank:WP_233479027.1;Name=WP_233479027.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172186.1;locus_tag=LU604_RS18945;product=ACP phosphodiesterase;protein_id=WP_233479027.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3552216 3553286 . + . ID=gene-LU604_RS18950;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=LU604_RS18950;old_locus_tag=LU604_18950 NZ_CP089942.1 Protein Homology CDS 3552216 3553286 . + 0 ID=cds-WP_233480843.1;Parent=gene-LU604_RS18950;Dbxref=Genbank:WP_233480843.1;Name=WP_233480843.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800907.1;locus_tag=LU604_RS18950;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_233480843.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3553326 3554534 . - . ID=gene-LU604_RS18955;Name=LU604_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18955;old_locus_tag=LU604_18955 NZ_CP089942.1 Protein Homology CDS 3553326 3554534 . - 0 ID=cds-WP_233479028.1-3;Parent=gene-LU604_RS18955;Dbxref=Genbank:WP_233479028.1;Name=WP_233479028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368856.1;locus_tag=LU604_RS18955;product=transposase;protein_id=WP_233479028.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3554558 3554974 . + . ID=gene-LU604_RS18960;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS18960;old_locus_tag=LU604_18960 NZ_CP089942.1 Protein Homology CDS 3554558 3554974 . + 0 ID=cds-WP_233479029.1-2;Parent=gene-LU604_RS18960;Dbxref=Genbank:WP_233479029.1;Name=WP_233479029.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368599.1;locus_tag=LU604_RS18960;product=IS200/IS605 family transposase;protein_id=WP_233479029.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3555567 3556691 . + . ID=gene-LU604_RS18965;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=LU604_RS18965;old_locus_tag=LU604_18965 NZ_CP089942.1 Protein Homology CDS 3555567 3556691 . + 0 ID=cds-WP_233479030.1;Parent=gene-LU604_RS18965;Dbxref=Genbank:WP_233479030.1;Name=WP_233479030.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008103992.1;locus_tag=LU604_RS18965;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_233479030.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3556716 3557054 . + . ID=gene-LU604_RS18970;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=LU604_RS18970;old_locus_tag=LU604_18970 NZ_CP089942.1 Protein Homology CDS 3556716 3557054 . + 0 ID=cds-WP_233479031.1;Parent=gene-LU604_RS18970;Dbxref=Genbank:WP_233479031.1;Name=WP_233479031.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=LU604_RS18970;product=preprotein translocase subunit YajC;protein_id=WP_233479031.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3557081 3558928 . + . ID=gene-LU604_RS18975;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=LU604_RS18975;old_locus_tag=LU604_18975 NZ_CP089942.1 Protein Homology CDS 3557081 3558928 . + 0 ID=cds-WP_016190654.1;Parent=gene-LU604_RS18975;Dbxref=Genbank:WP_016190654.1;Name=WP_016190654.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=LU604_RS18975;product=protein translocase subunit SecD;protein_id=WP_016190654.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3558939 3559907 . + . ID=gene-LU604_RS18980;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=LU604_RS18980;old_locus_tag=LU604_18980 NZ_CP089942.1 Protein Homology CDS 3558939 3559907 . + 0 ID=cds-WP_016190653.1;Parent=gene-LU604_RS18980;Dbxref=Genbank:WP_016190653.1;Name=WP_016190653.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649437.1;locus_tag=LU604_RS18980;product=protein translocase subunit SecF;protein_id=WP_016190653.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3560110 3560617 . + . ID=gene-LU604_RS18985;Name=LU604_RS18985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS18985;old_locus_tag=LU604_18985;pseudo=true NZ_CP089942.1 Protein Homology CDS 3560110 3560617 . + 0 ID=cds-LU604_RS18985;Parent=gene-LU604_RS18985;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010671743.1;locus_tag=LU604_RS18985;product=DUF2778 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3560691 3560843 . + . ID=gene-LU604_RS18990;Name=LU604_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18990;old_locus_tag=LU604_18990 NZ_CP089942.1 GeneMarkS-2+ CDS 3560691 3560843 . + 0 ID=cds-WP_233479032.1;Parent=gene-LU604_RS18990;Dbxref=Genbank:WP_233479032.1;Name=WP_233479032.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS18990;product=hypothetical protein;protein_id=WP_233479032.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3561012 3561709 . + . ID=gene-LU604_RS18995;Name=LU604_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS18995;old_locus_tag=LU604_18995 NZ_CP089942.1 Protein Homology CDS 3561012 3561261 . + 0 ID=cds-WP_233479033.1;Parent=gene-LU604_RS18995;Dbxref=Genbank:WP_233479033.1;Name=WP_233479033.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU604_RS18995;product=IS1 family transposase;protein_id=WP_233479033.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 3561261 3561709 . + 2 ID=cds-WP_233479033.1;Parent=gene-LU604_RS18995;Dbxref=Genbank:WP_233479033.1;Name=WP_233479033.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU604_RS18995;product=IS1 family transposase;protein_id=WP_233479033.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3562378 3564285 . + . ID=gene-LU604_RS19000;Name=LU604_RS19000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19000;old_locus_tag=LU604_19000;pseudo=true NZ_CP089942.1 Protein Homology CDS 3562378 3564285 . + 0 ID=cds-LU604_RS19000;Parent=gene-LU604_RS19000;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662350.1;locus_tag=LU604_RS19000;product=type VI secretion system tip protein VgrG;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3564296 3564715 . + . ID=gene-LU604_RS19005;Name=LU604_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19005;old_locus_tag=LU604_19005 NZ_CP089942.1 Protein Homology CDS 3564296 3564715 . + 0 ID=cds-WP_233479035.1;Parent=gene-LU604_RS19005;Dbxref=Genbank:WP_233479035.1;Name=WP_233479035.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020366.2;locus_tag=LU604_RS19005;product=DcrB-related protein;protein_id=WP_233479035.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3564765 3569195 . + . ID=gene-LU604_RS19010;Name=LU604_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19010;old_locus_tag=LU604_19010 NZ_CP089942.1 Protein Homology CDS 3564765 3569195 . + 0 ID=cds-WP_233479036.1;Parent=gene-LU604_RS19010;Dbxref=Genbank:WP_233479036.1;Name=WP_233479036.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040127.1;locus_tag=LU604_RS19010;product=PAAR domain-containing protein;protein_id=WP_233479036.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3569205 3570325 . - . ID=gene-LU604_RS19015;Name=LU604_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19015;old_locus_tag=LU604_19015 NZ_CP089942.1 Protein Homology CDS 3570067 3570325 . - 0 ID=cds-WP_233479037.1;Parent=gene-LU604_RS19015;Dbxref=Genbank:WP_233479037.1;Name=WP_233479037.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS19015;product=IS3 family transposase;protein_id=WP_233479037.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 3569205 3570067 . - 2 ID=cds-WP_233479037.1;Parent=gene-LU604_RS19015;Dbxref=Genbank:WP_233479037.1;Name=WP_233479037.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS19015;product=IS3 family transposase;protein_id=WP_233479037.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3570478 3570765 . + . ID=gene-LU604_RS19020;Name=LU604_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19020;old_locus_tag=LU604_19020 NZ_CP089942.1 Protein Homology CDS 3570478 3570765 . + 0 ID=cds-WP_233480844.1;Parent=gene-LU604_RS19020;Dbxref=Genbank:WP_233480844.1;Name=WP_233480844.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026969.2;locus_tag=LU604_RS19020;product=hypothetical protein;protein_id=WP_233480844.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3570768 3571046 . + . ID=gene-LU604_RS19025;Name=LU604_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19025;old_locus_tag=LU604_19025 NZ_CP089942.1 GeneMarkS-2+ CDS 3570768 3571046 . + 0 ID=cds-WP_233479038.1;Parent=gene-LU604_RS19025;Dbxref=Genbank:WP_233479038.1;Name=WP_233479038.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19025;product=hypothetical protein;protein_id=WP_233479038.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3571234 3571737 . - . ID=gene-LU604_RS19030;Name=LU604_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19030;old_locus_tag=LU604_19030 NZ_CP089942.1 Protein Homology CDS 3571234 3571737 . - 0 ID=cds-WP_233479039.1;Parent=gene-LU604_RS19030;Dbxref=Genbank:WP_233479039.1;Name=WP_233479039.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU604_RS19030;product=IS1 family transposase;protein_id=WP_233479039.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3572032 3572424 . + . ID=gene-LU604_RS19040;Name=LU604_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19040;old_locus_tag=LU604_19040 NZ_CP089942.1 GeneMarkS-2+ CDS 3572032 3572424 . + 0 ID=cds-WP_233481372.1;Parent=gene-LU604_RS19040;Dbxref=Genbank:WP_233481372.1;Name=WP_233481372.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19040;product=hypothetical protein;protein_id=WP_233481372.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3572442 3572939 . + . ID=gene-LU604_RS19045;Name=LU604_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19045;old_locus_tag=LU604_19045 NZ_CP089942.1 Protein Homology CDS 3572442 3572939 . + 0 ID=cds-WP_233481373.1;Parent=gene-LU604_RS19045;Dbxref=Genbank:WP_233481373.1;Name=WP_233481373.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=LU604_RS19045;product=tyrosine-type recombinase/integrase;protein_id=WP_233481373.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3573196 3573633 . + . ID=gene-LU604_RS19050;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS19050;old_locus_tag=LU604_19050 NZ_CP089942.1 Protein Homology CDS 3573196 3573633 . + 0 ID=cds-WP_233479040.1;Parent=gene-LU604_RS19050;Dbxref=Genbank:WP_233479040.1;Name=WP_233479040.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU604_RS19050;product=IS200/IS605 family transposase;protein_id=WP_233479040.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3574163 3574717 . - . ID=gene-LU604_RS19055;Name=LU604_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19055;old_locus_tag=LU604_19055 NZ_CP089942.1 Protein Homology CDS 3574163 3574717 . - 0 ID=cds-WP_016192773.1;Parent=gene-LU604_RS19055;Dbxref=Genbank:WP_016192773.1;Name=WP_016192773.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF008575.0;locus_tag=LU604_RS19055;product=DUF3251 domain-containing protein;protein_id=WP_016192773.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3574969 3575418 . + . ID=gene-LU604_RS19060;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=LU604_RS19060;old_locus_tag=LU604_19060 NZ_CP089942.1 Protein Homology CDS 3574969 3575418 . + 0 ID=cds-WP_016192774.1;Parent=gene-LU604_RS19060;Dbxref=Genbank:WP_016192774.1;Name=WP_016192774.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=LU604_RS19060;product=transcriptional regulator NrdR;protein_id=WP_016192774.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3575422 3576525 . + . ID=gene-LU604_RS19065;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=LU604_RS19065;old_locus_tag=LU604_19065 NZ_CP089942.1 Protein Homology CDS 3575422 3576525 . + 0 ID=cds-WP_233479041.1;Parent=gene-LU604_RS19065;Dbxref=Genbank:WP_233479041.1;Name=WP_233479041.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192775.1;locus_tag=LU604_RS19065;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_233479041.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3576641 3577111 . + . ID=gene-LU604_RS19070;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=LU604_RS19070;old_locus_tag=LU604_19070 NZ_CP089942.1 Protein Homology CDS 3576641 3577111 . + 0 ID=cds-WP_016192776.1;Parent=gene-LU604_RS19070;Dbxref=Genbank:WP_016192776.1;Name=WP_016192776.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308495.1;locus_tag=LU604_RS19070;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_016192776.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3577128 3577547 . + . ID=gene-LU604_RS19075;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=LU604_RS19075;old_locus_tag=LU604_19075 NZ_CP089942.1 Protein Homology CDS 3577128 3577547 . + 0 ID=cds-WP_016192777.1;Parent=gene-LU604_RS19075;Dbxref=Genbank:WP_016192777.1;Name=WP_016192777.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013201019.1;locus_tag=LU604_RS19075;product=transcription antitermination factor NusB;protein_id=WP_016192777.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3577586 3578563 . + . ID=gene-LU604_RS19080;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=LU604_RS19080;old_locus_tag=LU604_19080 NZ_CP089942.1 Protein Homology CDS 3577586 3578563 . + 0 ID=cds-WP_016192778.1;Parent=gene-LU604_RS19080;Dbxref=Genbank:WP_016192778.1;Name=WP_016192778.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156268.1;locus_tag=LU604_RS19080;product=thiamine-phosphate kinase;protein_id=WP_016192778.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3578541 3579047 . + . ID=gene-LU604_RS19085;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=LU604_RS19085;old_locus_tag=LU604_19085 NZ_CP089942.1 Protein Homology CDS 3578541 3579047 . + 0 ID=cds-WP_040465863.1;Parent=gene-LU604_RS19085;Dbxref=Genbank:WP_040465863.1;Name=WP_040465863.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156269.1;locus_tag=LU604_RS19085;product=phosphatidylglycerophosphatase A;protein_id=WP_040465863.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3579092 3580066 . - . ID=gene-LU604_RS19090;Name=LU604_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19090;old_locus_tag=LU604_19090 NZ_CP089942.1 Protein Homology CDS 3579092 3580066 . - 0 ID=cds-WP_016192780.1;Parent=gene-LU604_RS19090;Dbxref=Genbank:WP_016192780.1;Name=WP_016192780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005517.1;locus_tag=LU604_RS19090;product=aldo/keto reductase;protein_id=WP_016192780.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3580219 3580815 . - . ID=gene-LU604_RS19095;Name=LU604_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19095;old_locus_tag=LU604_19095 NZ_CP089942.1 Protein Homology CDS 3580219 3580815 . - 0 ID=cds-WP_233479042.1-2;Parent=gene-LU604_RS19095;Dbxref=Genbank:WP_233479042.1;Name=WP_233479042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191786.1;locus_tag=LU604_RS19095;product=tail fiber assembly protein;protein_id=WP_233479042.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3580815 3581501 . - . ID=gene-LU604_RS19100;Name=LU604_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19100;old_locus_tag=LU604_19100 NZ_CP089942.1 Protein Homology CDS 3580815 3581501 . - 0 ID=cds-WP_233479043.1-2;Parent=gene-LU604_RS19100;Dbxref=Genbank:WP_233479043.1;Name=WP_233479043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246703.1;locus_tag=LU604_RS19100;product=phage tail protein;protein_id=WP_233479043.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3581504 3582088 . - . ID=gene-LU604_RS19105;Name=LU604_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19105;old_locus_tag=LU604_19105 NZ_CP089942.1 Protein Homology CDS 3581504 3582088 . - 0 ID=cds-WP_016191784.1-2;Parent=gene-LU604_RS19105;Dbxref=Genbank:WP_016191784.1;Name=WP_016191784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012989058.1;locus_tag=LU604_RS19105;product=DUF2313 domain-containing protein;protein_id=WP_016191784.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3582158 3583159 . - . ID=gene-LU604_RS19110;Name=LU604_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19110;old_locus_tag=LU604_19110 NZ_CP089942.1 Protein Homology CDS 3582158 3583159 . - 0 ID=cds-WP_233479044.1-2;Parent=gene-LU604_RS19110;Dbxref=Genbank:WP_233479044.1;Name=WP_233479044.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016736.2;locus_tag=LU604_RS19110;product=baseplate J/gp47 family protein;protein_id=WP_233479044.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3583160 3583600 . - . ID=gene-LU604_RS19115;Name=LU604_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19115;old_locus_tag=LU604_19115 NZ_CP089942.1 Protein Homology CDS 3583160 3583600 . - 0 ID=cds-WP_016191782.1-2;Parent=gene-LU604_RS19115;Dbxref=Genbank:WP_016191782.1;Name=WP_016191782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185022.1;locus_tag=LU604_RS19115;product=phage GP46 family protein;protein_id=WP_016191782.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3583597 3584145 . - . ID=gene-LU604_RS19120;Name=LU604_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19120;old_locus_tag=LU604_19120 NZ_CP089942.1 Protein Homology CDS 3583597 3584145 . - 0 ID=cds-WP_016191781.1-2;Parent=gene-LU604_RS19120;Dbxref=Genbank:WP_016191781.1;Name=WP_016191781.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185021.1;locus_tag=LU604_RS19120;product=phage baseplate assembly protein V;protein_id=WP_016191781.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3584142 3585239 . - . ID=gene-LU604_RS19125;Name=LU604_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19125;old_locus_tag=LU604_19125 NZ_CP089942.1 Protein Homology CDS 3584142 3585239 . - 0 ID=cds-WP_233479045.1-2;Parent=gene-LU604_RS19125;Dbxref=Genbank:WP_233479045.1;Name=WP_233479045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191780.1;locus_tag=LU604_RS19125;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_233479045.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3585223 3586539 . - . ID=gene-LU604_RS19130;Name=LU604_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19130;old_locus_tag=LU604_19130 NZ_CP089942.1 Protein Homology CDS 3585223 3586539 . - 0 ID=cds-WP_233479046.1-2;Parent=gene-LU604_RS19130;Dbxref=Genbank:WP_233479046.1;Name=WP_233479046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847257.1;locus_tag=LU604_RS19130;product=DNA circularization N-terminal domain-containing protein;protein_id=WP_233479046.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3586539 3588347 . - . ID=gene-LU604_RS19135;Name=LU604_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19135;old_locus_tag=LU604_19135 NZ_CP089942.1 GeneMarkS-2+ CDS 3586539 3588347 . - 0 ID=cds-WP_233481374.1-2;Parent=gene-LU604_RS19135;Dbxref=Genbank:WP_233481374.1;Name=WP_233481374.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19135;product=hypothetical protein;protein_id=WP_233481374.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3588348 3588479 . - . ID=gene-LU604_RS27040;Name=LU604_RS27040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27040 NZ_CP089942.1 GeneMarkS-2+ CDS 3588348 3588479 . - 0 ID=cds-WP_016191777.1-2;Parent=gene-LU604_RS27040;Dbxref=Genbank:WP_016191777.1;Name=WP_016191777.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS27040;product=hypothetical protein;protein_id=WP_016191777.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3588481 3588834 . - . ID=gene-LU604_RS19140;Name=LU604_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19140;old_locus_tag=LU604_19140 NZ_CP089942.1 Protein Homology CDS 3588481 3588834 . - 0 ID=cds-WP_016191776.1-2;Parent=gene-LU604_RS19140;Dbxref=Genbank:WP_016191776.1;Name=WP_016191776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185017.1;locus_tag=LU604_RS19140;product=phage tail assembly protein;protein_id=WP_016191776.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3588838 3589197 . - . ID=gene-LU604_RS19145;Name=LU604_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19145;old_locus_tag=LU604_19145 NZ_CP089942.1 Protein Homology CDS 3588838 3589197 . - 0 ID=cds-WP_016191775.1-2;Parent=gene-LU604_RS19145;Dbxref=Genbank:WP_016191775.1;Name=WP_016191775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185016.1;locus_tag=LU604_RS19145;product=phage tail tube protein;protein_id=WP_016191775.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3589207 3590673 . - . ID=gene-LU604_RS19150;Name=LU604_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19150;old_locus_tag=LU604_19150 NZ_CP089942.1 Protein Homology CDS 3589207 3590673 . - 0 ID=cds-WP_016191774.1-2;Parent=gene-LU604_RS19150;Dbxref=Genbank:WP_016191774.1;Name=WP_016191774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185015.1;locus_tag=LU604_RS19150;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_016191774.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3590673 3590852 . - . ID=gene-LU604_RS19155;Name=LU604_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19155;old_locus_tag=LU604_19155 NZ_CP089942.1 Protein Homology CDS 3590673 3590852 . - 0 ID=cds-WP_016191773.1-2;Parent=gene-LU604_RS19155;Dbxref=Genbank:WP_016191773.1;Name=WP_016191773.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022401.2;locus_tag=LU604_RS19155;product=DUF2635 domain-containing protein;protein_id=WP_016191773.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3590845 3591411 . - . ID=gene-LU604_RS19160;Name=LU604_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19160;old_locus_tag=LU604_19160 NZ_CP089942.1 Protein Homology CDS 3590845 3591411 . - 0 ID=cds-WP_016191772.1-2;Parent=gene-LU604_RS19160;Dbxref=Genbank:WP_016191772.1;Name=WP_016191772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185013.1;locus_tag=LU604_RS19160;product=DUF1834 family protein;protein_id=WP_016191772.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3591525 3591866 . - . ID=gene-LU604_RS19165;Name=LU604_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19165;old_locus_tag=LU604_19165 NZ_CP089942.1 Protein Homology CDS 3591525 3591866 . - 0 ID=cds-WP_233481375.1;Parent=gene-LU604_RS19165;Dbxref=Genbank:WP_233481375.1;Name=WP_233481375.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018704.2;locus_tag=LU604_RS19165;product=DUF1320 family protein;protein_id=WP_233481375.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3591863 3592330 . - . ID=gene-LU604_RS19170;Name=LU604_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19170;old_locus_tag=LU604_19170 NZ_CP089942.1 Protein Homology CDS 3591863 3592330 . - 0 ID=cds-WP_233479048.1-2;Parent=gene-LU604_RS19170;Dbxref=Genbank:WP_233479048.1;Name=WP_233479048.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036841.2;locus_tag=LU604_RS19170;product=HI1506-related protein;protein_id=WP_233479048.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3592408 3593331 . - . ID=gene-LU604_RS19175;Name=LU604_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19175;old_locus_tag=LU604_19175 NZ_CP089942.1 Protein Homology CDS 3592408 3593331 . - 0 ID=cds-WP_233479049.1-2;Parent=gene-LU604_RS19175;Dbxref=Genbank:WP_233479049.1;Name=WP_233479049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185010.1;locus_tag=LU604_RS19175;product=Mu-like prophage major head subunit gpT family protein;protein_id=WP_233479049.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3593331 3594527 . - . ID=gene-LU604_RS19180;Name=LU604_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19180;old_locus_tag=LU604_19180 NZ_CP089942.1 Protein Homology CDS 3593331 3594527 . - 0 ID=cds-WP_233479050.1-2;Parent=gene-LU604_RS19180;Dbxref=Genbank:WP_233479050.1;Name=WP_233479050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191767.1;locus_tag=LU604_RS19180;product=phage protease;protein_id=WP_233479050.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3594685 3595152 . - . ID=gene-LU604_RS19185;Name=LU604_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19185;old_locus_tag=LU604_19185 NZ_CP089942.1 Protein Homology CDS 3594685 3595152 . - 0 ID=cds-WP_016191766.1-2;Parent=gene-LU604_RS19185;Dbxref=Genbank:WP_016191766.1;Name=WP_016191766.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185008.1;locus_tag=LU604_RS19185;product=phage virion morphogenesis protein;protein_id=WP_016191766.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3595153 3596475 . - . ID=gene-LU604_RS19190;Name=LU604_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19190;old_locus_tag=LU604_19190 NZ_CP089942.1 Protein Homology CDS 3595153 3596475 . - 0 ID=cds-WP_233479051.1-2;Parent=gene-LU604_RS19190;Dbxref=Genbank:WP_233479051.1;Name=WP_233479051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536785.1;locus_tag=LU604_RS19190;product=phage minor head protein;protein_id=WP_233479051.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3596459 3598042 . - . ID=gene-LU604_RS19195;Name=LU604_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19195;old_locus_tag=LU604_19195 NZ_CP089942.1 Protein Homology CDS 3596459 3598042 . - 0 ID=cds-WP_233479052.1-2;Parent=gene-LU604_RS19195;Dbxref=Genbank:WP_233479052.1;Name=WP_233479052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191763.1;locus_tag=LU604_RS19195;product=DUF935 domain-containing protein;protein_id=WP_233479052.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3598033 3599595 . - . ID=gene-LU604_RS19200;Name=LU604_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19200;old_locus_tag=LU604_19200 NZ_CP089942.1 Protein Homology CDS 3598033 3599595 . - 0 ID=cds-WP_233479053.1-2;Parent=gene-LU604_RS19200;Dbxref=Genbank:WP_233479053.1;Name=WP_233479053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191762.1;locus_tag=LU604_RS19200;product=hypothetical protein;protein_id=WP_233479053.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3599595 3600167 . - . ID=gene-LU604_RS19205;Name=LU604_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19205;old_locus_tag=LU604_19205 NZ_CP089942.1 Protein Homology CDS 3599595 3600167 . - 0 ID=cds-WP_233479054.1-2;Parent=gene-LU604_RS19205;Dbxref=Genbank:WP_233479054.1;Name=WP_233479054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191761.1;locus_tag=LU604_RS19205;product=DUF3486 family protein;protein_id=WP_233479054.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3600169 3600456 . - . ID=gene-LU604_RS19210;Name=LU604_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19210;old_locus_tag=LU604_19210 NZ_CP089942.1 Protein Homology CDS 3600169 3600456 . - 0 ID=cds-WP_016191760.1-2;Parent=gene-LU604_RS19210;Dbxref=Genbank:WP_016191760.1;Name=WP_016191760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442919.1;locus_tag=LU604_RS19210;product=hypothetical protein;protein_id=WP_016191760.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3600459 3600752 . - . ID=gene-LU604_RS19215;Name=LU604_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19215;old_locus_tag=LU604_19215 NZ_CP089942.1 Protein Homology CDS 3600459 3600752 . - 0 ID=cds-WP_016191759.1-2;Parent=gene-LU604_RS19215;Dbxref=Genbank:WP_016191759.1;Name=WP_016191759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807466.1;locus_tag=LU604_RS19215;product=DUF2730 family protein;protein_id=WP_016191759.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3600745 3600969 . - . ID=gene-LU604_RS19220;Name=LU604_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19220;old_locus_tag=LU604_19220 NZ_CP089942.1 Protein Homology CDS 3600745 3600969 . - 0 ID=cds-WP_016191758.1-2;Parent=gene-LU604_RS19220;Dbxref=Genbank:WP_016191758.1;Name=WP_016191758.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF013427.2;locus_tag=LU604_RS19220;product=TraR/DksA C4-type zinc finger protein;protein_id=WP_016191758.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3600969 3601571 . - . ID=gene-LU604_RS19225;Name=LU604_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19225;old_locus_tag=LU604_19225 NZ_CP089942.1 GeneMarkS-2+ CDS 3600969 3601571 . - 0 ID=cds-WP_233479055.1-2;Parent=gene-LU604_RS19225;Dbxref=Genbank:WP_233479055.1;Name=WP_233479055.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19225;product=hypothetical protein;protein_id=WP_233479055.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3601564 3601797 . - . ID=gene-LU604_RS19230;Name=LU604_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19230;old_locus_tag=LU604_19230 NZ_CP089942.1 Protein Homology CDS 3601564 3601797 . - 0 ID=cds-WP_016191756.1-2;Parent=gene-LU604_RS19230;Dbxref=Genbank:WP_016191756.1;Name=WP_016191756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185000.1;locus_tag=LU604_RS19230;product=hypothetical protein;protein_id=WP_016191756.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3601860 3602087 . - . ID=gene-LU604_RS19235;Name=LU604_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19235;old_locus_tag=LU604_19235 NZ_CP089942.1 GeneMarkS-2+ CDS 3601860 3602087 . - 0 ID=cds-WP_233481376.1;Parent=gene-LU604_RS19235;Dbxref=Genbank:WP_233481376.1;Name=WP_233481376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19235;product=hypothetical protein;protein_id=WP_233481376.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3602087 3602593 . - . ID=gene-LU604_RS19240;Name=LU604_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19240;old_locus_tag=LU604_19240 NZ_CP089942.1 Protein Homology CDS 3602087 3602593 . - 0 ID=cds-WP_233479056.1-2;Parent=gene-LU604_RS19240;Dbxref=Genbank:WP_233479056.1;Name=WP_233479056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191754.1;locus_tag=LU604_RS19240;product=peptidoglycan-binding protein;protein_id=WP_233479056.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3602715 3603155 . - . ID=gene-LU604_RS19245;Name=LU604_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19245;old_locus_tag=LU604_19245 NZ_CP089942.1 Protein Homology CDS 3602715 3603155 . - 0 ID=cds-WP_016191753.1-2;Parent=gene-LU604_RS19245;Dbxref=Genbank:WP_016191753.1;Name=WP_016191753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184997.1;locus_tag=LU604_RS19245;product=transcriptional regulator;protein_id=WP_016191753.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3603152 3603661 . - . ID=gene-LU604_RS19250;Name=LU604_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19250;old_locus_tag=LU604_19250 NZ_CP089942.1 Protein Homology CDS 3603152 3603661 . - 0 ID=cds-WP_016191752.1-2;Parent=gene-LU604_RS19250;Dbxref=Genbank:WP_016191752.1;Name=WP_016191752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184995.1;locus_tag=LU604_RS19250;product=hypothetical protein;protein_id=WP_016191752.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3603658 3604212 . - . ID=gene-LU604_RS19255;Name=LU604_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19255;old_locus_tag=LU604_19255 NZ_CP089942.1 Protein Homology CDS 3603658 3604212 . - 0 ID=cds-WP_016191751.1-2;Parent=gene-LU604_RS19255;Dbxref=Genbank:WP_016191751.1;Name=WP_016191751.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018011.2;locus_tag=LU604_RS19255;product=regulatory protein GemA;protein_id=WP_016191751.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3604323 3604583 . - . ID=gene-LU604_RS19260;Name=LU604_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19260;old_locus_tag=LU604_19260 NZ_CP089942.1 GeneMarkS-2+ CDS 3604323 3604583 . - 0 ID=cds-WP_016191750.1-2;Parent=gene-LU604_RS19260;Dbxref=Genbank:WP_016191750.1;Name=WP_016191750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19260;product=hypothetical protein;protein_id=WP_016191750.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3604585 3605199 . - . ID=gene-LU604_RS19265;Name=LU604_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19265;old_locus_tag=LU604_19265 NZ_CP089942.1 Protein Homology CDS 3604585 3605199 . - 0 ID=cds-WP_233479057.1-2;Parent=gene-LU604_RS19265;Dbxref=Genbank:WP_233479057.1;Name=WP_233479057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807477.1;locus_tag=LU604_RS19265;product=DUF3164 family protein;protein_id=WP_233479057.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3605192 3605434 . - . ID=gene-LU604_RS19270;Name=LU604_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19270;old_locus_tag=LU604_19270 NZ_CP089942.1 GeneMarkS-2+ CDS 3605192 3605434 . - 0 ID=cds-WP_016191748.1-2;Parent=gene-LU604_RS19270;Dbxref=Genbank:WP_016191748.1;Name=WP_016191748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19270;product=hypothetical protein;protein_id=WP_016191748.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3605431 3605916 . - . ID=gene-LU604_RS19275;Name=LU604_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19275;old_locus_tag=LU604_19275 NZ_CP089942.1 Protein Homology CDS 3605431 3605916 . - 0 ID=cds-WP_233479058.1-2;Parent=gene-LU604_RS19275;Dbxref=Genbank:WP_233479058.1;Name=WP_233479058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191747.1;locus_tag=LU604_RS19275;product=AAA family ATPase;protein_id=WP_233479058.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3605834 3606382 . - . ID=gene-LU604_RS19280;Name=LU604_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19280;old_locus_tag=LU604_19280 NZ_CP089942.1 GeneMarkS-2+ CDS 3605834 3606382 . - 0 ID=cds-WP_233479059.1-2;Parent=gene-LU604_RS19280;Dbxref=Genbank:WP_233479059.1;Name=WP_233479059.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19280;product=hypothetical protein;protein_id=WP_233479059.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3606385 3608367 . - . ID=gene-LU604_RS19285;Name=LU604_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19285;old_locus_tag=LU604_19285 NZ_CP089942.1 Protein Homology CDS 3606385 3608367 . - 0 ID=cds-WP_233480146.1-2;Parent=gene-LU604_RS19285;Dbxref=Genbank:WP_233480146.1;Name=WP_233480146.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF014911.2;locus_tag=LU604_RS19285;product=DNA-binding protein;protein_id=WP_233480146.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3608659 3609480 . + . ID=gene-LU604_RS19290;Name=LU604_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19290;old_locus_tag=LU604_19290 NZ_CP089942.1 Protein Homology CDS 3608659 3609480 . + 0 ID=cds-WP_233479062.1-2;Parent=gene-LU604_RS19290;Dbxref=Genbank:WP_233479062.1;Name=WP_233479062.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.2;locus_tag=LU604_RS19290;product=helix-turn-helix transcriptional regulator;protein_id=WP_233479062.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3609914 3611779 . - . ID=gene-LU604_RS19295;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=LU604_RS19295;old_locus_tag=LU604_19295 NZ_CP089942.1 Protein Homology CDS 3609914 3611779 . - 0 ID=cds-WP_233479063.1;Parent=gene-LU604_RS19295;Dbxref=Genbank:WP_233479063.1;Name=WP_233479063.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668902.1;locus_tag=LU604_RS19295;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_233479063.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3611799 3612698 . - . ID=gene-LU604_RS19300;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=LU604_RS19300;old_locus_tag=LU604_19300 NZ_CP089942.1 Protein Homology CDS 3611799 3612698 . - 0 ID=cds-WP_016192782.1;Parent=gene-LU604_RS19300;Dbxref=Genbank:WP_016192782.1;Name=WP_016192782.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156272.1;locus_tag=LU604_RS19300;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_016192782.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3612698 3612940 . - . ID=gene-LU604_RS19305;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=LU604_RS19305;old_locus_tag=LU604_19305 NZ_CP089942.1 Protein Homology CDS 3612698 3612940 . - 0 ID=cds-WP_016192783.1;Parent=gene-LU604_RS19305;Dbxref=Genbank:WP_016192783.1;Name=WP_016192783.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024868.1;locus_tag=LU604_RS19305;product=exodeoxyribonuclease VII small subunit;protein_id=WP_016192783.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3613270 3614718 . + . ID=gene-LU604_RS19310;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=LU604_RS19310;old_locus_tag=LU604_19310 NZ_CP089942.1 Protein Homology CDS 3613270 3614718 . + 0 ID=cds-WP_233479064.1;Parent=gene-LU604_RS19310;Dbxref=Genbank:WP_233479064.1;Name=WP_233479064.1;Ontology_term=GO:0006400,GO:0009228,GO:0003824;gbkey=CDS;gene=thiI;go_function=catalytic activity|0003824||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459420.1;locus_tag=LU604_RS19310;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WP_233479064.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3615023 3615457 . - . ID=gene-LU604_RS19315;Name=LU604_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19315;old_locus_tag=LU604_19315 NZ_CP089942.1 Protein Homology CDS 3615023 3615457 . - 0 ID=cds-WP_016192785.1;Parent=gene-LU604_RS19315;Dbxref=Genbank:WP_016192785.1;Name=WP_016192785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442899.1;locus_tag=LU604_RS19315;product=hypothetical protein;protein_id=WP_016192785.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3615454 3616154 . - . ID=gene-LU604_RS19320;Name=LU604_RS19320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19320;old_locus_tag=LU604_19320;pseudo=true NZ_CP089942.1 Protein Homology CDS 3615454 3616154 . - 0 ID=cds-LU604_RS19320;Parent=gene-LU604_RS19320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442898.1;locus_tag=LU604_RS19320;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3616377 3616813 . + . ID=gene-LU604_RS19325;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS19325;old_locus_tag=LU604_19325;pseudo=true NZ_CP089942.1 Protein Homology CDS 3616377 3616813 . + 0 ID=cds-LU604_RS19325;Parent=gene-LU604_RS19325;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU604_RS19325;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3616888 3617172 . + . ID=gene-LU604_RS19330;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS19330;old_locus_tag=LU604_19330;partial=true;pseudo=true;start_range=.,3616888 NZ_CP089942.1 Protein Homology CDS 3616888 3617172 . + 0 ID=cds-LU604_RS19330;Parent=gene-LU604_RS19330;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041205574.1;locus_tag=LU604_RS19330;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,3616888;transl_table=11 NZ_CP089942.1 RefSeq gene 3617374 3618414 . - . ID=gene-LU604_RS19335;Name=LU604_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19335;old_locus_tag=LU604_19335 NZ_CP089942.1 Protein Homology CDS 3617374 3618414 . - 0 ID=cds-WP_233478553.1-25;Parent=gene-LU604_RS19335;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS19335;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3618587 3619794 . - . ID=gene-LU604_RS19340;Name=LU604_RS19340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19340;old_locus_tag=LU604_19340;pseudo=true NZ_CP089942.1 Protein Homology CDS 3618587 3619794 . - 0 ID=cds-LU604_RS19340;Parent=gene-LU604_RS19340;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS19340;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3620233 3620725 . + . ID=gene-LU604_RS19345;Name=LU604_RS19345;end_range=3620725,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19345;old_locus_tag=LU604_19345;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3620233 3620725 . + 0 ID=cds-LU604_RS19345;Parent=gene-LU604_RS19345;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=3620725,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=LU604_RS19345;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3621018 3622373 . - . ID=gene-LU604_RS19350;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=LU604_RS19350;old_locus_tag=LU604_19350 NZ_CP089942.1 Protein Homology CDS 3621018 3622373 . - 0 ID=cds-WP_233479065.1;Parent=gene-LU604_RS19350;Dbxref=Genbank:WP_233479065.1;Name=WP_233479065.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192792.1;locus_tag=LU604_RS19350;product=proline-specific permease ProY;protein_id=WP_233479065.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3622459 3623757 . - . ID=gene-LU604_RS19355;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=LU604_RS19355;old_locus_tag=LU604_19355 NZ_CP089942.1 Protein Homology CDS 3622459 3623757 . - 0 ID=cds-WP_016192793.1;Parent=gene-LU604_RS19355;Dbxref=Genbank:WP_016192793.1;Name=WP_016192793.1;Ontology_term=GO:0015803,GO:0015658;gbkey=CDS;gene=brnQ;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800902.1;locus_tag=LU604_RS19355;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_016192793.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3623848 3624033 . + . ID=gene-LU604_RS19360;Name=LU604_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19360;old_locus_tag=LU604_19360 NZ_CP089942.1 GeneMarkS-2+ CDS 3623848 3624033 . + 0 ID=cds-WP_040465865.1;Parent=gene-LU604_RS19360;Dbxref=Genbank:WP_040465865.1;Name=WP_040465865.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19360;product=hypothetical protein;protein_id=WP_040465865.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3624149 3625234 . - . ID=gene-LU604_RS19365;Name=LU604_RS19365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19365;old_locus_tag=LU604_19365;pseudo=true NZ_CP089942.1 Protein Homology CDS 3624149 3625234 . - 0 ID=cds-LU604_RS19365;Parent=gene-LU604_RS19365;Note=frameshifted;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804972.1;locus_tag=LU604_RS19365;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3625474 3625815 . - . ID=gene-LU604_RS19370;Name=LU604_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19370;old_locus_tag=LU604_19370 NZ_CP089942.1 GeneMarkS-2+ CDS 3625474 3625815 . - 0 ID=cds-WP_233479066.1;Parent=gene-LU604_RS19370;Dbxref=Genbank:WP_233479066.1;Name=WP_233479066.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19370;product=hypothetical protein;protein_id=WP_233479066.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3625802 3626278 . - . ID=gene-LU604_RS19375;Name=LU604_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19375;old_locus_tag=LU604_19375 NZ_CP089942.1 Protein Homology CDS 3625802 3626278 . - 0 ID=cds-WP_233480845.1;Parent=gene-LU604_RS19375;Dbxref=Genbank:WP_233480845.1;Name=WP_233480845.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028064.2;locus_tag=LU604_RS19375;product=hypothetical protein;protein_id=WP_233480845.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3626769 3627403 . + . ID=gene-LU604_RS19380;Name=LU604_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19380;old_locus_tag=LU604_19380 NZ_CP089942.1 Protein Homology CDS 3626769 3626955 . + 0 ID=cds-WP_233479067.1;Parent=gene-LU604_RS19380;Dbxref=Genbank:WP_233479067.1;Name=WP_233479067.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS19380;product=IS1 family transposase;protein_id=WP_233479067.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 3626955 3627403 . + 2 ID=cds-WP_233479067.1;Parent=gene-LU604_RS19380;Dbxref=Genbank:WP_233479067.1;Name=WP_233479067.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS19380;product=IS1 family transposase;protein_id=WP_233479067.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3628210 3629508 . - . ID=gene-LU604_RS19385;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=LU604_RS19385;old_locus_tag=LU604_19385 NZ_CP089942.1 Protein Homology CDS 3628210 3629508 . - 0 ID=cds-WP_233479068.1;Parent=gene-LU604_RS19385;Dbxref=Genbank:WP_233479068.1;Name=WP_233479068.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192797.1;locus_tag=LU604_RS19385;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_233479068.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3629533 3630222 . - . ID=gene-LU604_RS19390;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=LU604_RS19390;old_locus_tag=LU604_19390 NZ_CP089942.1 Protein Homology CDS 3629533 3630222 . - 0 ID=cds-WP_016192798.1;Parent=gene-LU604_RS19390;Dbxref=Genbank:WP_016192798.1;Name=WP_016192798.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=LU604_RS19390;product=phosphate response regulator transcription factor PhoB;protein_id=WP_016192798.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3630423 3631646 . + . ID=gene-LU604_RS19395;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=LU604_RS19395;old_locus_tag=LU604_19395 NZ_CP089942.1 Protein Homology CDS 3630423 3631646 . + 0 ID=cds-WP_233479069.1;Parent=gene-LU604_RS19395;Dbxref=Genbank:WP_233479069.1;Name=WP_233479069.1;Ontology_term=GO:0006259,GO:0008408;gbkey=CDS;gene=sbcD;go_function=3'-5' exonuclease activity|0008408||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192799.1;locus_tag=LU604_RS19395;product=exonuclease subunit SbcD;protein_id=WP_233479069.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3631643 3635317 . + . ID=gene-LU604_RS19400;Name=LU604_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19400;old_locus_tag=LU604_19400 NZ_CP089942.1 Protein Homology CDS 3631643 3635317 . + 0 ID=cds-WP_233479070.1;Parent=gene-LU604_RS19400;Dbxref=Genbank:WP_233479070.1;Name=WP_233479070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192800.1;locus_tag=LU604_RS19400;product=exonuclease subunit SbcC;protein_id=WP_233479070.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3635399 3636034 . - . ID=gene-LU604_RS19405;Name=LU604_RS19405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19405;old_locus_tag=LU604_19405;partial=true;pseudo=true;start_range=.,3635399 NZ_CP089942.1 Protein Homology CDS 3635399 3636034 . - 0 ID=cds-LU604_RS19405;Parent=gene-LU604_RS19405;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200996.1;locus_tag=LU604_RS19405;partial=true;product=DUF799 domain-containing protein;pseudo=true;start_range=.,3635399;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3636050 3636360 . - . ID=gene-LU604_RS19410;Name=LU604_RS19410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19410;old_locus_tag=LU604_19410;pseudo=true NZ_CP089942.1 Protein Homology CDS 3636050 3636360 . - 0 ID=cds-LU604_RS19410;Parent=gene-LU604_RS19410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008106083.1;locus_tag=LU604_RS19410;product=DUF4810 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3636385 3636722 . - . ID=gene-LU604_RS19415;Name=LU604_RS19415;end_range=3636722,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19415;old_locus_tag=LU604_19415;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3636385 3636722 . - 0 ID=cds-LU604_RS19415;Parent=gene-LU604_RS19415;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3636722,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168944.1;locus_tag=LU604_RS19415;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3637052 3637963 . + . ID=gene-LU604_RS19420;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=LU604_RS19420;old_locus_tag=LU604_19420 NZ_CP089942.1 Protein Homology CDS 3637052 3637963 . + 0 ID=cds-WP_233479071.1;Parent=gene-LU604_RS19420;Dbxref=Genbank:WP_233479071.1;Name=WP_233479071.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=LU604_RS19420;product=recombination-associated protein RdgC;protein_id=WP_233479071.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3638001 3638291 . - . ID=gene-LU604_RS19425;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=LU604_RS19425;old_locus_tag=LU604_19425 NZ_CP089942.1 Protein Homology CDS 3638001 3638291 . - 0 ID=cds-WP_016192805.1;Parent=gene-LU604_RS19425;Dbxref=Genbank:WP_016192805.1;Name=WP_016192805.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024838.1;locus_tag=LU604_RS19425;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_016192805.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3638426 3639247 . - . ID=gene-LU604_RS19430;Name=LU604_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19430;old_locus_tag=LU604_19430 NZ_CP089942.1 Protein Homology CDS 3638426 3639247 . - 0 ID=cds-WP_233479072.1;Parent=gene-LU604_RS19430;Dbxref=Genbank:WP_233479072.1;Name=WP_233479072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192806.1;locus_tag=LU604_RS19430;product=AroM family protein;protein_id=WP_233479072.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3639289 3639471 . - . ID=gene-LU604_RS19435;Name=LU604_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19435;old_locus_tag=LU604_19435 NZ_CP089942.1 GeneMarkS-2+ CDS 3639289 3639471 . - 0 ID=cds-WP_233481377.1;Parent=gene-LU604_RS19435;Dbxref=Genbank:WP_233481377.1;Name=WP_233481377.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19435;product=hypothetical protein;protein_id=WP_233481377.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3639431 3639622 . - . ID=gene-LU604_RS19440;Name=LU604_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19440;old_locus_tag=LU604_19440 NZ_CP089942.1 Protein Homology CDS 3639431 3639622 . - 0 ID=cds-WP_233480846.1;Parent=gene-LU604_RS19440;Dbxref=Genbank:WP_233480846.1;Name=WP_233480846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442273.1;locus_tag=LU604_RS19440;product=YaiA family protein;protein_id=WP_233480846.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3639950 3640474 . - . ID=gene-LU604_RS19445;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=LU604_RS19445;old_locus_tag=LU604_19445 NZ_CP089942.1 Protein Homology CDS 3639950 3640474 . - 0 ID=cds-WP_233479073.1;Parent=gene-LU604_RS19445;Dbxref=Genbank:WP_233479073.1;Name=WP_233479073.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543575.1;locus_tag=LU604_RS19445;product=shikimate kinase AroL;protein_id=WP_233479073.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3640781 3641488 . + . ID=gene-LU604_RS19450;Name=LU604_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19450;old_locus_tag=LU604_19450 NZ_CP089942.1 Protein Homology CDS 3640781 3641488 . + 0 ID=cds-WP_233479074.1;Parent=gene-LU604_RS19450;Dbxref=Genbank:WP_233479074.1;Name=WP_233479074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156177.1;locus_tag=LU604_RS19450;product=DUF2076 domain-containing protein;protein_id=WP_233479074.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3641540 3641995 . - . ID=gene-LU604_RS19455;Name=LU604_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19455;old_locus_tag=LU604_19455 NZ_CP089942.1 Protein Homology CDS 3641540 3641995 . - 0 ID=cds-WP_046372091.1;Parent=gene-LU604_RS19455;Dbxref=Genbank:WP_046372091.1;Name=WP_046372091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242949.1;locus_tag=LU604_RS19455;product=YaiI/YqxD family protein;protein_id=WP_046372091.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3642816 3643813 . - . ID=gene-LU604_RS19460;Name=LU604_RS19460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19460;old_locus_tag=LU604_19460;pseudo=true NZ_CP089942.1 Protein Homology CDS 3642816 3643813 . - 0 ID=cds-LU604_RS19460;Parent=gene-LU604_RS19460;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315785.1;locus_tag=LU604_RS19460;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3644267 3645079 . + . ID=gene-LU604_RS19465;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=LU604_RS19465;old_locus_tag=LU604_19465 NZ_CP089942.1 Protein Homology CDS 3644267 3645079 . + 0 ID=cds-WP_040465874.1;Parent=gene-LU604_RS19465;Dbxref=Genbank:WP_040465874.1;Name=WP_040465874.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168926.1;locus_tag=LU604_RS19465;product=pyrroline-5-carboxylate reductase;protein_id=WP_040465874.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3645571 3645780 . - . ID=gene-LU604_RS19470;Name=LU604_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19470;old_locus_tag=LU604_19470 NZ_CP089942.1 GeneMarkS-2+ CDS 3645571 3645780 . - 0 ID=cds-WP_233479075.1;Parent=gene-LU604_RS19470;Dbxref=Genbank:WP_233479075.1;Name=WP_233479075.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19470;product=hypothetical protein;protein_id=WP_233479075.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3646047 3649121 . + . ID=gene-LU604_RS19475;Name=LU604_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19475;old_locus_tag=LU604_19475 NZ_CP089942.1 Protein Homology CDS 3646047 3649121 . + 0 ID=cds-WP_233479076.1;Parent=gene-LU604_RS19475;Dbxref=Genbank:WP_233479076.1;Name=WP_233479076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192814.1;locus_tag=LU604_RS19475;product=beta-galactosidase;protein_id=WP_233479076.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3649203 3649415 . - . ID=gene-LU604_RS19480;Name=LU604_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19480;old_locus_tag=LU604_19480 NZ_CP089942.1 GeneMarkS-2+ CDS 3649203 3649415 . - 0 ID=cds-WP_016192815.1;Parent=gene-LU604_RS19480;Dbxref=Genbank:WP_016192815.1;Name=WP_016192815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19480;product=hypothetical protein;protein_id=WP_016192815.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3649486 3649698 . - . ID=gene-LU604_RS19485;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;locus_tag=LU604_RS19485;old_locus_tag=LU604_19485 NZ_CP089942.1 Protein Homology CDS 3649486 3649698 . - 0 ID=cds-WP_012442280.1;Parent=gene-LU604_RS19485;Dbxref=Genbank:WP_012442280.1;Name=WP_012442280.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066495.1;locus_tag=LU604_RS19485;product=RNA chaperone/antiterminator CspA;protein_id=WP_012442280.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3650028 3650699 . + . ID=gene-LU604_RS19490;Name=LU604_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19490;old_locus_tag=LU604_19490 NZ_CP089942.1 Protein Homology CDS 3650028 3650699 . + 0 ID=cds-WP_016192816.1;Parent=gene-LU604_RS19490;Dbxref=Genbank:WP_016192816.1;Name=WP_016192816.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964433.1;locus_tag=LU604_RS19490;product=MarC family NAAT transporter;protein_id=WP_016192816.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3651050 3651235 . + . ID=gene-LU604_RS19495;Name=LU604_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19495;old_locus_tag=LU604_19495 NZ_CP089942.1 GeneMarkS-2+ CDS 3651050 3651235 . + 0 ID=cds-WP_233479077.1;Parent=gene-LU604_RS19495;Dbxref=Genbank:WP_233479077.1;Name=WP_233479077.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19495;product=hypothetical protein;protein_id=WP_233479077.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3651267 3651557 . - . ID=gene-LU604_RS19500;Name=LU604_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19500;old_locus_tag=LU604_19500 NZ_CP089942.1 Protein Homology CDS 3651267 3651557 . - 0 ID=cds-WP_016192817.1;Parent=gene-LU604_RS19500;Dbxref=Genbank:WP_016192817.1;Name=WP_016192817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606468.1;locus_tag=LU604_RS19500;product=I78 family peptidase inhibitor;protein_id=WP_016192817.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3651872 3653440 . + . ID=gene-LU604_RS19505;Name=LU604_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19505;old_locus_tag=LU604_19505 NZ_CP089942.1 Protein Homology CDS 3651872 3653440 . + 0 ID=cds-WP_233479078.1;Parent=gene-LU604_RS19505;Dbxref=Genbank:WP_233479078.1;Name=WP_233479078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543563.1;locus_tag=LU604_RS19505;product=ABC transporter substrate-binding protein;protein_id=WP_233479078.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3653440 3654492 . + . ID=gene-LU604_RS19510;Name=LU604_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19510;old_locus_tag=LU604_19510 NZ_CP089942.1 Protein Homology CDS 3653440 3654492 . + 0 ID=cds-WP_233479079.1;Parent=gene-LU604_RS19510;Dbxref=Genbank:WP_233479079.1;Name=WP_233479079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007886439.1;locus_tag=LU604_RS19510;product=ABC transporter permease;protein_id=WP_233479079.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3654489 3655346 . + . ID=gene-LU604_RS19515;Name=LU604_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19515;old_locus_tag=LU604_19515 NZ_CP089942.1 Protein Homology CDS 3654489 3655346 . + 0 ID=cds-WP_233479080.1;Parent=gene-LU604_RS19515;Dbxref=Genbank:WP_233479080.1;Name=WP_233479080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668946.1;locus_tag=LU604_RS19515;product=ABC transporter permease;protein_id=WP_233479080.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3655306 3656184 . + . ID=gene-LU604_RS19520;Name=LU604_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19520;old_locus_tag=LU604_19520 NZ_CP089942.1 Protein Homology CDS 3655306 3656184 . + 0 ID=cds-WP_046372092.1;Parent=gene-LU604_RS19520;Dbxref=Genbank:WP_046372092.1;Name=WP_046372092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539322.1;locus_tag=LU604_RS19520;product=ABC transporter ATP-binding protein;protein_id=WP_046372092.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3656177 3656842 . + . ID=gene-LU604_RS19525;Name=LU604_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19525;old_locus_tag=LU604_19525 NZ_CP089942.1 Protein Homology CDS 3656177 3656842 . + 0 ID=cds-WP_233479081.1;Parent=gene-LU604_RS19525;Dbxref=Genbank:WP_233479081.1;Name=WP_233479081.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168907.1;locus_tag=LU604_RS19525;product=ATP-binding cassette domain-containing protein;protein_id=WP_233479081.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3656913 3657107 . - . ID=gene-LU604_RS19530;Name=LU604_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19530;old_locus_tag=LU604_19530 NZ_CP089942.1 Protein Homology CDS 3656913 3657107 . - 0 ID=cds-WP_233481378.1;Parent=gene-LU604_RS19530;Dbxref=Genbank:WP_233481378.1;Name=WP_233481378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156145.1;locus_tag=LU604_RS19530;product=hypothetical protein;protein_id=WP_233481378.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3657200 3657559 . - . ID=gene-LU604_RS19535;Name=LU604_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19535;old_locus_tag=LU604_19535 NZ_CP089942.1 Protein Homology CDS 3657200 3657559 . - 0 ID=cds-WP_016192824.1;Parent=gene-LU604_RS19535;Dbxref=Genbank:WP_016192824.1;Name=WP_016192824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152400.1;locus_tag=LU604_RS19535;product=DUF305 domain-containing protein;protein_id=WP_016192824.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3658198 3658895 . + . ID=gene-LU604_RS19540;Name=LU604_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19540;old_locus_tag=LU604_19540 NZ_CP089942.1 Protein Homology CDS 3658198 3658447 . + 0 ID=cds-WP_233479082.1;Parent=gene-LU604_RS19540;Dbxref=Genbank:WP_233479082.1;Name=WP_233479082.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS19540;product=IS1 family transposase;protein_id=WP_233479082.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 3658447 3658895 . + 2 ID=cds-WP_233479082.1;Parent=gene-LU604_RS19540;Dbxref=Genbank:WP_233479082.1;Name=WP_233479082.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS19540;product=IS1 family transposase;protein_id=WP_233479082.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3659368 3659684 . - . ID=gene-LU604_RS19545;Name=LU604_RS19545;end_range=3659684,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19545;old_locus_tag=LU604_19545;partial=true;pseudo=true;start_range=.,3659368 NZ_CP089942.1 Protein Homology CDS 3659368 3659684 . - 0 ID=cds-LU604_RS19545;Parent=gene-LU604_RS19545;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=3659684,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS19545;partial=true;product=transposase;pseudo=true;start_range=.,3659368;transl_table=11 NZ_CP089942.1 RefSeq gene 3660291 3660584 . + . ID=gene-LU604_RS19550;Name=LU604_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19550;old_locus_tag=LU604_19550 NZ_CP089942.1 Protein Homology CDS 3660291 3660584 . + 0 ID=cds-WP_233479083.1;Parent=gene-LU604_RS19550;Dbxref=Genbank:WP_233479083.1;Name=WP_233479083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668951.1;locus_tag=LU604_RS19550;product=hypothetical protein;protein_id=WP_233479083.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3660601 3661638 . + . ID=gene-LU604_RS19555;Name=LU604_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19555;old_locus_tag=LU604_19555 NZ_CP089942.1 Protein Homology CDS 3660601 3661638 . + 0 ID=cds-WP_040465868.1;Parent=gene-LU604_RS19555;Dbxref=Genbank:WP_040465868.1;Name=WP_040465868.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004156143.1;locus_tag=LU604_RS19555;product=acyltransferase family protein;protein_id=WP_040465868.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3661714 3661941 . - . ID=gene-LU604_RS19560;Name=LU604_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19560;old_locus_tag=LU604_19560 NZ_CP089942.1 Protein Homology CDS 3661714 3661941 . - 0 ID=cds-WP_016192828.1;Parent=gene-LU604_RS19560;Dbxref=Genbank:WP_016192828.1;Name=WP_016192828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168902.1;locus_tag=LU604_RS19560;product=hypothetical protein;protein_id=WP_016192828.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3662008 3662595 . - . ID=gene-LU604_RS19565;Name=LU604_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19565;old_locus_tag=LU604_19565 NZ_CP089942.1 Protein Homology CDS 3662008 3662595 . - 0 ID=cds-WP_233479084.1;Parent=gene-LU604_RS19565;Dbxref=Genbank:WP_233479084.1;Name=WP_233479084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192829.1;locus_tag=LU604_RS19565;product=methyltransferase;protein_id=WP_233479084.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3663179 3663454 . + . ID=gene-LU604_RS27045;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=LU604_RS27045 NZ_CP089942.1 Protein Homology CDS 3663179 3663454 . + 0 ID=cds-WP_245181559.1;Parent=gene-LU604_RS27045;Dbxref=Genbank:WP_245181559.1;Name=WP_245181559.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: protein motif:HMM:NF022556.2;locus_tag=LU604_RS27045;product=exopolysaccharide production protein YjbE;protein_id=WP_245181559.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3663558 3663758 . + . ID=gene-LU604_RS19575;Name=LU604_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19575;old_locus_tag=LU604_19575 NZ_CP089942.1 Protein Homology CDS 3663558 3663758 . + 0 ID=cds-WP_233479085.1;Parent=gene-LU604_RS19575;Dbxref=Genbank:WP_233479085.1;Name=WP_233479085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192831.1;locus_tag=LU604_RS19575;product=hypothetical protein;protein_id=WP_233479085.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3664292 3664735 . + . ID=gene-LU604_RS19580;Name=LU604_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19580;old_locus_tag=LU604_19580 NZ_CP089942.1 GeneMarkS-2+ CDS 3664292 3664735 . + 0 ID=cds-WP_233479086.1;Parent=gene-LU604_RS19580;Dbxref=Genbank:WP_233479086.1;Name=WP_233479086.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19580;product=hypothetical protein;protein_id=WP_233479086.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3665605 3665982 . + . ID=gene-LU604_RS19585;Name=LU604_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19585;old_locus_tag=LU604_19585 NZ_CP089942.1 Protein Homology CDS 3665605 3665982 . + 0 ID=cds-WP_016192833.1;Parent=gene-LU604_RS19585;Dbxref=Genbank:WP_016192833.1;Name=WP_016192833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200944.1;locus_tag=LU604_RS19585;product=hypothetical protein;protein_id=WP_016192833.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3666190 3666417 . + . ID=gene-LU604_RS19590;Name=LU604_RS19590;end_range=3666417,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19590;old_locus_tag=LU604_19590;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3666190 3666417 . + 0 ID=cds-LU604_RS19590;Parent=gene-LU604_RS19590;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=3666417,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013578006.1;locus_tag=LU604_RS19590;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3666881 3670666 . - . ID=gene-LU604_RS19595;Name=LU604_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19595;old_locus_tag=LU604_19595 NZ_CP089942.1 GeneMarkS-2+ CDS 3666881 3670666 . - 0 ID=cds-WP_233481379.1;Parent=gene-LU604_RS19595;Dbxref=Genbank:WP_233481379.1;Name=WP_233481379.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19595;product=hypothetical protein;protein_id=WP_233481379.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3670557 3673502 . - . ID=gene-LU604_RS19600;Name=LU604_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19600;old_locus_tag=LU604_19600 NZ_CP089942.1 GeneMarkS-2+ CDS 3670557 3673502 . - 0 ID=cds-WP_233481380.1;Parent=gene-LU604_RS19600;Dbxref=Genbank:WP_233481380.1;Name=WP_233481380.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19600;product=hypothetical protein;protein_id=WP_233481380.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3673505 3673759 . - . ID=gene-LU604_RS19605;Name=LU604_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19605;old_locus_tag=LU604_19605 NZ_CP089942.1 GeneMarkS-2+ CDS 3673505 3673759 . - 0 ID=cds-WP_233481381.1;Parent=gene-LU604_RS19605;Dbxref=Genbank:WP_233481381.1;Name=WP_233481381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19605;product=hypothetical protein;protein_id=WP_233481381.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3674171 3674329 . + . ID=gene-LU604_RS19610;Name=LU604_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19610;old_locus_tag=LU604_19610 NZ_CP089942.1 GeneMarkS-2+ CDS 3674171 3674329 . + 0 ID=cds-WP_233481382.1;Parent=gene-LU604_RS19610;Dbxref=Genbank:WP_233481382.1;Name=WP_233481382.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19610;product=hypothetical protein;protein_id=WP_233481382.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3674506 3675708 . - . ID=gene-LU604_RS19615;Name=LU604_RS19615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19615;old_locus_tag=LU604_19615;pseudo=true NZ_CP089942.1 Protein Homology CDS 3674506 3675708 . - 0 ID=cds-LU604_RS19615;Parent=gene-LU604_RS19615;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368856.1;locus_tag=LU604_RS19615;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3675731 3676147 . + . ID=gene-LU604_RS19620;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS19620;old_locus_tag=LU604_19620 NZ_CP089942.1 Protein Homology CDS 3675731 3676147 . + 0 ID=cds-WP_233481383.1;Parent=gene-LU604_RS19620;Dbxref=Genbank:WP_233481383.1;Name=WP_233481383.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192838.1;locus_tag=LU604_RS19620;product=IS200/IS605 family transposase;protein_id=WP_233481383.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3676411 3676773 . - . ID=gene-LU604_RS19625;Name=LU604_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19625;old_locus_tag=LU604_19625 NZ_CP089942.1 GeneMarkS-2+ CDS 3676411 3676773 . - 0 ID=cds-WP_233481384.1;Parent=gene-LU604_RS19625;Dbxref=Genbank:WP_233481384.1;Name=WP_233481384.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19625;product=hypothetical protein;protein_id=WP_233481384.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3676906 3677603 . + . ID=gene-LU604_RS19630;Name=LU604_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19630;old_locus_tag=LU604_19630 NZ_CP089942.1 Protein Homology CDS 3676906 3677155 . + 0 ID=cds-WP_233481385.1;Parent=gene-LU604_RS19630;Dbxref=Genbank:WP_233481385.1;Name=WP_233481385.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU604_RS19630;product=IS1 family transposase;protein_id=WP_233481385.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 3677155 3677603 . + 2 ID=cds-WP_233481385.1;Parent=gene-LU604_RS19630;Dbxref=Genbank:WP_233481385.1;Name=WP_233481385.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU604_RS19630;product=IS1 family transposase;protein_id=WP_233481385.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3677915 3678358 . + . ID=gene-LU604_RS19635;Name=LU604_RS19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19635;old_locus_tag=LU604_19635 NZ_CP089942.1 Protein Homology CDS 3677915 3678358 . + 0 ID=cds-WP_233479089.1;Parent=gene-LU604_RS19635;Dbxref=Genbank:WP_233479089.1;Name=WP_233479089.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020707.2;locus_tag=LU604_RS19635;product=AvrPphF family type III effector;protein_id=WP_233479089.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3678643 3679108 . - . ID=gene-LU604_RS19640;Name=LU604_RS19640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19640;old_locus_tag=LU604_19640;pseudo=true NZ_CP089942.1 Protein Homology CDS 3678643 3679108 . - 0 ID=cds-LU604_RS19640;Parent=gene-LU604_RS19640;Note=frameshifted;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542662.1;locus_tag=LU604_RS19640;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3679448 3680143 . + . ID=gene-LU604_RS19645;Name=LU604_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19645;old_locus_tag=LU604_19645 NZ_CP089942.1 Protein Homology CDS 3679448 3680143 . + 0 ID=cds-WP_233479090.1;Parent=gene-LU604_RS19645;Dbxref=Genbank:WP_233479090.1;Name=WP_233479090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000639811.1;locus_tag=LU604_RS19645;product=pirin family protein;protein_id=WP_233479090.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3680241 3681236 . + . ID=gene-LU604_RS19650;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=LU604_RS19650;old_locus_tag=LU604_19650 NZ_CP089942.1 Protein Homology CDS 3680241 3681236 . + 0 ID=cds-WP_233479091.1;Parent=gene-LU604_RS19650;Dbxref=Genbank:WP_233479091.1;Name=WP_233479091.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003853061.1;locus_tag=LU604_RS19650;product=gluconate operon transcriptional repressor GntR;protein_id=WP_233479091.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3681419 3681952 . + . ID=gene-LU604_RS19655;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=LU604_RS19655;old_locus_tag=LU604_19655 NZ_CP089942.1 Protein Homology CDS 3681419 3681952 . + 0 ID=cds-WP_233479092.1;Parent=gene-LU604_RS19655;Dbxref=Genbank:WP_233479092.1;Name=WP_233479092.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204229.1;locus_tag=LU604_RS19655;product=gluconokinase;protein_id=WP_233479092.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3681962 3683302 . + . ID=gene-LU604_RS19660;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=LU604_RS19660;old_locus_tag=LU604_19660 NZ_CP089942.1 Protein Homology CDS 3681962 3683302 . + 0 ID=cds-WP_233479093.1;Parent=gene-LU604_RS19660;Dbxref=Genbank:WP_233479093.1;Name=WP_233479093.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693851.1;locus_tag=LU604_RS19660;product=gluconate transporter;protein_id=WP_233479093.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3683721 3684418 . + . ID=gene-LU604_RS19665;Name=LU604_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19665;old_locus_tag=LU604_19665 NZ_CP089942.1 Protein Homology CDS 3683721 3683982 . + 0 ID=cds-WP_233479094.1;Parent=gene-LU604_RS19665;Dbxref=Genbank:WP_233479094.1;Name=WP_233479094.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS19665;product=IS1 family transposase;protein_id=WP_233479094.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 3683982 3684418 . + 2 ID=cds-WP_233479094.1;Parent=gene-LU604_RS19665;Dbxref=Genbank:WP_233479094.1;Name=WP_233479094.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS19665;product=IS1 family transposase;protein_id=WP_233479094.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3685091 3686785 . - . ID=gene-LU604_RS19670;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=LU604_RS19670;old_locus_tag=LU604_19670 NZ_CP089942.1 Protein Homology CDS 3685091 3686785 . - 0 ID=cds-WP_046372095.1;Parent=gene-LU604_RS19670;Dbxref=Genbank:WP_046372095.1;Name=WP_046372095.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457925.1;locus_tag=LU604_RS19670;product=gamma-glutamyltransferase;protein_id=WP_046372095.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3687763 3688938 . + . ID=gene-LU604_RS19675;Name=LU604_RS19675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19675;old_locus_tag=LU604_19675;pseudo=true NZ_CP089942.1 Protein Homology CDS 3687763 3688938 . + 0 ID=cds-LU604_RS19675;Parent=gene-LU604_RS19675;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS19675;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3689017 3690056 . + . ID=gene-LU604_RS19680;Name=LU604_RS19680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19680;old_locus_tag=LU604_19680;pseudo=true NZ_CP089942.1 Protein Homology CDS 3689017 3690056 . + 0 ID=cds-LU604_RS19680;Parent=gene-LU604_RS19680;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS19680;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3690624 3691664 . - . ID=gene-LU604_RS19685;Name=LU604_RS19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19685;old_locus_tag=LU604_19685 NZ_CP089942.1 Protein Homology CDS 3690624 3691664 . - 0 ID=cds-WP_233478553.1-26;Parent=gene-LU604_RS19685;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS19685;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3691748 3692173 . - . ID=gene-LU604_RS19690;Name=LU604_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19690;old_locus_tag=LU604_19690 NZ_CP089942.1 Protein Homology CDS 3691748 3692173 . - 0 ID=cds-WP_233481386.1;Parent=gene-LU604_RS19690;Dbxref=Genbank:WP_233481386.1;Name=WP_233481386.1;Ontology_term=GO:0030254;gbkey=CDS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192236.1;locus_tag=LU604_RS19690;product=CesT family type III secretion system chaperone;protein_id=WP_233481386.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3692632 3692961 . + . ID=gene-LU604_RS19695;Name=LU604_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19695;old_locus_tag=LU604_19695 NZ_CP089942.1 Protein Homology CDS 3692632 3692961 . + 0 ID=cds-WP_233481387.1;Parent=gene-LU604_RS19695;Dbxref=Genbank:WP_233481387.1;Name=WP_233481387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192237.1;locus_tag=LU604_RS19695;product=DUF2756 domain-containing protein;protein_id=WP_233481387.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3693144 3693907 . - . ID=gene-LU604_RS19700;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=pseudogene;locus_tag=LU604_RS19700;old_locus_tag=LU604_19700;pseudo=true NZ_CP089942.1 Protein Homology CDS 3693144 3693907 . - 0 ID=cds-LU604_RS19700;Parent=gene-LU604_RS19700;Note=frameshifted;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204238.1;locus_tag=LU604_RS19700;product=glycerophosphodiester phosphodiesterase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3693904 3694242 . - . ID=gene-LU604_RS19705;Name=LU604_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19705;old_locus_tag=LU604_19705 NZ_CP089942.1 Protein Homology CDS 3693904 3694242 . - 0 ID=cds-WP_233479097.1;Parent=gene-LU604_RS19705;Dbxref=Genbank:WP_233479097.1;Name=WP_233479097.1;Ontology_term=GO:0055085,GO:0005524,GO:0022857,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019998.2;locus_tag=LU604_RS19705;product=TOBE domain-containing protein;protein_id=WP_233479097.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3694524 3694895 . - . ID=gene-LU604_RS19710;Name=LU604_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19710;old_locus_tag=LU604_19710 NZ_CP089942.1 Protein Homology CDS 3694524 3694895 . - 0 ID=cds-WP_233480847.1;Parent=gene-LU604_RS19710;Dbxref=Genbank:WP_233480847.1;Name=WP_233480847.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF014430.2;locus_tag=LU604_RS19710;product=transposase;protein_id=WP_233480847.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3695121 3695916 . + . ID=gene-LU604_RS19715;Name=LU604_RS19715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19715;old_locus_tag=LU604_19715;pseudo=true NZ_CP089942.1 Protein Homology CDS 3695121 3695916 . + 0 ID=cds-LU604_RS19715;Parent=gene-LU604_RS19715;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917256.1;locus_tag=LU604_RS19715;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3695949 3696241 . - . ID=gene-LU604_RS19720;Name=LU604_RS19720;end_range=3696241,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19720;old_locus_tag=LU604_19720;partial=true;pseudo=true;start_range=.,3695949 NZ_CP089942.1 Protein Homology CDS 3695949 3696241 . - 0 ID=cds-LU604_RS19720;Parent=gene-LU604_RS19720;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3696241,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012586380.1;locus_tag=LU604_RS19720;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,3695949;transl_table=11 NZ_CP089942.1 RefSeq gene 3696661 3697371 . - . ID=gene-LU604_RS19725;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=LU604_RS19725;old_locus_tag=LU604_19725 NZ_CP089942.1 Protein Homology CDS 3696661 3697371 . - 0 ID=cds-WP_233479098.1;Parent=gene-LU604_RS19725;Dbxref=Genbank:WP_233479098.1;Name=WP_233479098.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204243.1;locus_tag=LU604_RS19725;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_233479098.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3697373 3698140 . - . ID=gene-LU604_RS19730;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=LU604_RS19730;old_locus_tag=LU604_19730 NZ_CP089942.1 Protein Homology CDS 3697373 3698140 . - 0 ID=cds-WP_233479099.1;Parent=gene-LU604_RS19730;Dbxref=Genbank:WP_233479099.1;Name=WP_233479099.1;Ontology_term=GO:0005524;gbkey=CDS;gene=livG;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462462.1;locus_tag=LU604_RS19730;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_233479099.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3698137 3699411 . - . ID=gene-LU604_RS19735;Name=LU604_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19735;old_locus_tag=LU604_19735 NZ_CP089942.1 Protein Homology CDS 3698137 3699411 . - 0 ID=cds-WP_016192245.1;Parent=gene-LU604_RS19735;Dbxref=Genbank:WP_016192245.1;Name=WP_016192245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004173538.1;locus_tag=LU604_RS19735;product=high-affinity branched-chain amino acid ABC transporter permease LivM;protein_id=WP_016192245.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3699408 3700334 . - . ID=gene-LU604_RS19740;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=LU604_RS19740;old_locus_tag=LU604_19740 NZ_CP089942.1 Protein Homology CDS 3699408 3700334 . - 0 ID=cds-WP_233480848.1;Parent=gene-LU604_RS19740;Dbxref=Genbank:WP_233480848.1;Name=WP_233480848.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=LU604_RS19740;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_233480848.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3700476 3701591 . - . ID=gene-LU604_RS19745;Name=LU604_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19745;old_locus_tag=LU604_19745 NZ_CP089942.1 Protein Homology CDS 3700476 3701591 . - 0 ID=cds-WP_233479100.1;Parent=gene-LU604_RS19745;Dbxref=Genbank:WP_233479100.1;Name=WP_233479100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191523.1;locus_tag=LU604_RS19745;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_233479100.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3701976 3702371 . + . ID=gene-LU604_RS19750;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=LU604_RS19750;old_locus_tag=LU604_19750 NZ_CP089942.1 Protein Homology CDS 3701976 3702371 . + 0 ID=cds-WP_016192248.1;Parent=gene-LU604_RS19750;Dbxref=Genbank:WP_016192248.1;Name=WP_016192248.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015962630.1;locus_tag=LU604_RS19750;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_016192248.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3702487 3703341 . - . ID=gene-LU604_RS19755;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=LU604_RS19755;old_locus_tag=LU604_19755 NZ_CP089942.1 Protein Homology CDS 3702487 3703341 . - 0 ID=cds-WP_016192249.1;Parent=gene-LU604_RS19755;Dbxref=Genbank:WP_016192249.1;Name=WP_016192249.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458573.1;locus_tag=LU604_RS19755;product=RNA polymerase sigma factor RpoH;protein_id=WP_016192249.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3703608 3704600 . - . ID=gene-LU604_RS19760;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=LU604_RS19760;old_locus_tag=LU604_19760 NZ_CP089942.1 Protein Homology CDS 3703608 3704600 . - 0 ID=cds-WP_040465779.1;Parent=gene-LU604_RS19760;Dbxref=Genbank:WP_040465779.1;Name=WP_040465779.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008109891.1;locus_tag=LU604_RS19760;product=permease-like cell division protein FtsX;protein_id=WP_040465779.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3704593 3705258 . - . ID=gene-LU604_RS19765;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=LU604_RS19765;old_locus_tag=LU604_19765 NZ_CP089942.1 Protein Homology CDS 3704593 3705258 . - 0 ID=cds-WP_233479101.1;Parent=gene-LU604_RS19765;Dbxref=Genbank:WP_233479101.1;Name=WP_233479101.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192251.1;locus_tag=LU604_RS19765;product=cell division ATP-binding protein FtsE;protein_id=WP_233479101.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3705261 3706715 . - . ID=gene-LU604_RS19770;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=LU604_RS19770;old_locus_tag=LU604_19770 NZ_CP089942.1 Protein Homology CDS 3705261 3706715 . - 0 ID=cds-WP_233479102.1;Parent=gene-LU604_RS19770;Dbxref=Genbank:WP_233479102.1;Name=WP_233479102.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192252.1;locus_tag=LU604_RS19770;product=signal recognition particle-docking protein FtsY;protein_id=WP_233479102.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3706881 3707486 . + . ID=gene-LU604_RS19775;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=LU604_RS19775;old_locus_tag=LU604_19775 NZ_CP089942.1 Protein Homology CDS 3706881 3707486 . + 0 ID=cds-WP_233479103.1;Parent=gene-LU604_RS19775;Dbxref=Genbank:WP_233479103.1;Name=WP_233479103.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192253.1;locus_tag=LU604_RS19775;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_233479103.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3707480 3707749 . + . ID=gene-LU604_RS19780;Name=LU604_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19780;old_locus_tag=LU604_19780 NZ_CP089942.1 Protein Homology CDS 3707480 3707749 . + 0 ID=cds-WP_233479104.1;Parent=gene-LU604_RS19780;Dbxref=Genbank:WP_233479104.1;Name=WP_233479104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542679.1;locus_tag=LU604_RS19780;product=DUF1145 family protein;protein_id=WP_233479104.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3707811 3708152 . - . ID=gene-LU604_RS19785;Name=LU604_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19785;old_locus_tag=LU604_19785 NZ_CP089942.1 Protein Homology CDS 3707811 3708152 . - 0 ID=cds-WP_233479105.1;Parent=gene-LU604_RS19785;Dbxref=Genbank:WP_233479105.1;Name=WP_233479105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010615906.1;locus_tag=LU604_RS19785;product=DUF2500 family protein;protein_id=WP_233479105.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3708397 3709023 . + . ID=gene-LU604_RS19790;Name=LU604_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19790;old_locus_tag=LU604_19790 NZ_CP089942.1 Protein Homology CDS 3708397 3709023 . + 0 ID=cds-WP_016192256.1;Parent=gene-LU604_RS19790;Dbxref=Genbank:WP_016192256.1;Name=WP_016192256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171227.1;locus_tag=LU604_RS19790;product=lysoplasmalogenase;protein_id=WP_016192256.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3709114 3711408 . + . ID=gene-LU604_RS19795;Name=LU604_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19795;old_locus_tag=LU604_19795 NZ_CP089942.1 Protein Homology CDS 3709114 3711408 . + 0 ID=cds-WP_233479106.1;Parent=gene-LU604_RS19795;Dbxref=Genbank:WP_233479106.1;Name=WP_233479106.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;go_function=ATPase-coupled cation transmembrane transporter activity|0019829||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160856.1;locus_tag=LU604_RS19795;product=zinc/cadmium/mercury/lead-transporting ATPase;protein_id=WP_233479106.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3711419 3711637 . + . ID=gene-LU604_RS19800;Name=LU604_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19800;old_locus_tag=LU604_19800 NZ_CP089942.1 GeneMarkS-2+ CDS 3711419 3711637 . + 0 ID=cds-WP_016192259.1;Parent=gene-LU604_RS19800;Dbxref=Genbank:WP_016192259.1;Name=WP_016192259.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19800;product=hypothetical protein;protein_id=WP_016192259.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3711714 3711959 . - . ID=gene-LU604_RS19805;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=LU604_RS19805;old_locus_tag=LU604_19805 NZ_CP089942.1 Protein Homology CDS 3711714 3711959 . - 0 ID=cds-WP_016192260.1;Parent=gene-LU604_RS19805;Dbxref=Genbank:WP_016192260.1;Name=WP_016192260.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204261.1;locus_tag=LU604_RS19805;product=sulfurtransferase TusA;protein_id=WP_016192260.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3712202 3712867 . + . ID=gene-LU604_RS19810;Name=LU604_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19810;old_locus_tag=LU604_19810 NZ_CP089942.1 Protein Homology CDS 3712202 3712867 . + 0 ID=cds-WP_233480849.1;Parent=gene-LU604_RS19810;Dbxref=Genbank:WP_233480849.1;Name=WP_233480849.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442956.1;locus_tag=LU604_RS19810;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_233480849.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3713130 3713678 . + . ID=gene-LU604_RS19815;Name=LU604_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19815;old_locus_tag=LU604_19815 NZ_CP089942.1 Protein Homology CDS 3713130 3713678 . + 0 ID=cds-WP_016192262.1;Parent=gene-LU604_RS19815;Dbxref=Genbank:WP_016192262.1;Name=WP_016192262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001245295.1;locus_tag=LU604_RS19815;product=DcrB family lipoprotein;protein_id=WP_016192262.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3714150 3714473 . - . ID=gene-LU604_RS19820;Name=LU604_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19820;old_locus_tag=LU604_19820 NZ_CP089942.1 GeneMarkS-2+ CDS 3714150 3714473 . - 0 ID=cds-WP_233479107.1;Parent=gene-LU604_RS19820;Dbxref=Genbank:WP_233479107.1;Name=WP_233479107.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19820;product=hypothetical protein;protein_id=WP_233479107.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3714618 3715297 . - . ID=gene-LU604_RS19825;Name=LU604_RS19825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19825;old_locus_tag=LU604_19825;pseudo=true NZ_CP089942.1 Protein Homology CDS 3714618 3715297 . - 0 ID=cds-LU604_RS19825;Parent=gene-LU604_RS19825;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=LU604_RS19825;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3715528 3718013 . - . ID=gene-LU604_RS19830;Name=LU604_RS19830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19830;old_locus_tag=LU604_19830;pseudo=true NZ_CP089942.1 Protein Homology CDS 3715528 3718013 . - 0 ID=cds-LU604_RS19830;Parent=gene-LU604_RS19830;Note=frameshifted;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016242196.1;locus_tag=LU604_RS19830;product=phage tail tape measure protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3718046 3718639 . - . ID=gene-LU604_RS19835;Name=LU604_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19835;old_locus_tag=LU604_19835 NZ_CP089942.1 Protein Homology CDS 3718046 3718639 . - 0 ID=cds-WP_233479108.1;Parent=gene-LU604_RS19835;Dbxref=Genbank:WP_233479108.1;Name=WP_233479108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805615.1;locus_tag=LU604_RS19835;product=hypothetical protein;protein_id=WP_233479108.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3718641 3718955 . - . ID=gene-LU604_RS19840;Name=LU604_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19840;old_locus_tag=LU604_19840 NZ_CP089942.1 GeneMarkS-2+ CDS 3718641 3718955 . - 0 ID=cds-WP_233479109.1;Parent=gene-LU604_RS19840;Dbxref=Genbank:WP_233479109.1;Name=WP_233479109.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19840;product=hypothetical protein;protein_id=WP_233479109.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3719257 3719784 . - . ID=gene-LU604_RS19845;Name=LU604_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19845;old_locus_tag=LU604_19845 NZ_CP089942.1 Protein Homology CDS 3719257 3719784 . - 0 ID=cds-WP_233479110.1;Parent=gene-LU604_RS19845;Dbxref=Genbank:WP_233479110.1;Name=WP_233479110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192267.1;locus_tag=LU604_RS19845;product=regulator of pectin lyase production;protein_id=WP_233479110.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3720035 3720322 . - . ID=gene-LU604_RS19850;Name=LU604_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19850;old_locus_tag=LU604_19850 NZ_CP089942.1 Protein Homology CDS 3720035 3720322 . - 0 ID=cds-WP_016192268.1;Parent=gene-LU604_RS19850;Dbxref=Genbank:WP_016192268.1;Name=WP_016192268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648201.1;locus_tag=LU604_RS19850;product=hypothetical protein;protein_id=WP_016192268.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3720319 3720798 . - . ID=gene-LU604_RS19855;Name=LU604_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19855;old_locus_tag=LU604_19855 NZ_CP089942.1 Protein Homology CDS 3720319 3720798 . - 0 ID=cds-WP_233479111.1;Parent=gene-LU604_RS19855;Dbxref=Genbank:WP_233479111.1;Name=WP_233479111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576624.1;locus_tag=LU604_RS19855;product=hypothetical protein;protein_id=WP_233479111.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3720936 3721127 . + . ID=gene-LU604_RS19860;Name=LU604_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19860;old_locus_tag=LU604_19860 NZ_CP089942.1 Protein Homology CDS 3720936 3721127 . + 0 ID=cds-WP_040465770.1;Parent=gene-LU604_RS19860;Dbxref=Genbank:WP_040465770.1;Name=WP_040465770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001442290.1;locus_tag=LU604_RS19860;product=toxin-antitoxin system HicB family antitoxin;protein_id=WP_040465770.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3721147 3721410 . + . ID=gene-LU604_RS19865;Name=LU604_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19865;old_locus_tag=LU604_19865 NZ_CP089942.1 GeneMarkS-2+ CDS 3721147 3721410 . + 0 ID=cds-WP_233479112.1;Parent=gene-LU604_RS19865;Dbxref=Genbank:WP_233479112.1;Name=WP_233479112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19865;product=hypothetical protein;protein_id=WP_233479112.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3722501 3722758 . + . ID=gene-LU604_RS19870;Name=LU604_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19870;old_locus_tag=LU604_19870 NZ_CP089942.1 GeneMarkS-2+ CDS 3722501 3722758 . + 0 ID=cds-WP_233479113.1;Parent=gene-LU604_RS19870;Dbxref=Genbank:WP_233479113.1;Name=WP_233479113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19870;product=hypothetical protein;protein_id=WP_233479113.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3722794 3722970 . + . ID=gene-LU604_RS19875;Name=LU604_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19875;old_locus_tag=LU604_19875 NZ_CP089942.1 Protein Homology CDS 3722794 3722970 . + 0 ID=cds-WP_233479114.1;Parent=gene-LU604_RS19875;Dbxref=Genbank:WP_233479114.1;Name=WP_233479114.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023411.2;locus_tag=LU604_RS19875;product=DUF3486 family protein;protein_id=WP_233479114.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3723266 3724020 . - . ID=gene-LU604_RS19880;Name=LU604_RS19880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19880;old_locus_tag=LU604_19880;partial=true;pseudo=true;start_range=.,3723266 NZ_CP089942.1 Protein Homology CDS 3723266 3724020 . - 0 ID=cds-LU604_RS19880;Parent=gene-LU604_RS19880;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204274.1;locus_tag=LU604_RS19880;partial=true;product=MFS transporter;pseudo=true;start_range=.,3723266;transl_table=11 NZ_CP089942.1 RefSeq gene 3724152 3724481 . - . ID=gene-LU604_RS19885;Name=LU604_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19885;old_locus_tag=LU604_19885 NZ_CP089942.1 Protein Homology CDS 3724152 3724481 . - 0 ID=cds-WP_233479115.1;Parent=gene-LU604_RS19885;Dbxref=Genbank:WP_233479115.1;Name=WP_233479115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191140.1;locus_tag=LU604_RS19885;product=DHCW motif cupin fold protein;protein_id=WP_233479115.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3724874 3726379 . + . ID=gene-LU604_RS19890;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=LU604_RS19890;old_locus_tag=LU604_19890 NZ_CP089942.1 Protein Homology CDS 3724874 3726379 . + 0 ID=cds-WP_016191141.1;Parent=gene-LU604_RS19890;Dbxref=Genbank:WP_016191141.1;Name=WP_016191141.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007760414.1;locus_tag=LU604_RS19890;product=glycine betaine/L-proline transporter ProP;protein_id=WP_016191141.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3726464 3727567 . - . ID=gene-LU604_RS19895;Name=LU604_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19895;old_locus_tag=LU604_19895 NZ_CP089942.1 Protein Homology CDS 3726464 3727567 . - 0 ID=cds-WP_233479116.1;Parent=gene-LU604_RS19895;Dbxref=Genbank:WP_233479116.1;Name=WP_233479116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191142.1;locus_tag=LU604_RS19895;product=ABC transporter substrate-binding protein;protein_id=WP_233479116.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3727580 3729675 . - . ID=gene-LU604_RS19900;Name=LU604_RS19900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19900;old_locus_tag=LU604_19900;pseudo=true NZ_CP089942.1 Protein Homology CDS 3727580 3729675 . - 0 ID=cds-LU604_RS19900;Parent=gene-LU604_RS19900;Note=frameshifted;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191143.1;locus_tag=LU604_RS19900;product=TonB-dependent siderophore receptor;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3729874 3733248 . - . ID=gene-LU604_RS19905;Name=LU604_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19905;old_locus_tag=LU604_19905 NZ_CP089942.1 Protein Homology CDS 3729874 3733248 . - 0 ID=cds-WP_233479117.1;Parent=gene-LU604_RS19905;Dbxref=Genbank:WP_233479117.1;Name=WP_233479117.1;Ontology_term=GO:0046819,GO:0015474,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=autotransporter activity|0015474||IEA;go_process=protein secretion by the type V secretion system|0046819||IEA;inference=COORDINATES: protein motif:HMM:TIGR01414.1;locus_tag=LU604_RS19905;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_233479117.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3734030 3735082 . - . ID=gene-LU604_RS19910;Name=LU604_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19910;old_locus_tag=LU604_19910 NZ_CP089942.1 GeneMarkS-2+ CDS 3734030 3735082 . - 0 ID=cds-WP_016191145.1;Parent=gene-LU604_RS19910;Dbxref=Genbank:WP_016191145.1;Name=WP_016191145.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS19910;product=hypothetical protein;protein_id=WP_016191145.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3735170 3737950 . - . ID=gene-LU604_RS19915;Name=LU604_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19915;old_locus_tag=LU604_19915 NZ_CP089942.1 Protein Homology CDS 3735170 3737950 . - 0 ID=cds-WP_233479118.1;Parent=gene-LU604_RS19915;Dbxref=Genbank:WP_233479118.1;Name=WP_233479118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191146.1;locus_tag=LU604_RS19915;product=inverse autotransporter beta domain-containing protein;protein_id=WP_233479118.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3738793 3739296 . - . ID=gene-LU604_RS19920;Name=LU604_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19920;old_locus_tag=LU604_19920 NZ_CP089942.1 Protein Homology CDS 3738793 3739296 . - 0 ID=cds-WP_046372083.1;Parent=gene-LU604_RS19920;Dbxref=Genbank:WP_046372083.1;Name=WP_046372083.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU604_RS19920;product=IS1 family transposase;protein_id=WP_046372083.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3739215 3739490 . - . ID=gene-LU604_RS19925;Name=LU604_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19925;old_locus_tag=LU604_19925 NZ_CP089942.1 Protein Homology CDS 3739215 3739490 . - 0 ID=cds-WP_016192850.1-2;Parent=gene-LU604_RS19925;Dbxref=Genbank:WP_016192850.1;Name=WP_016192850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU604_RS19925;product=transposase;protein_id=WP_016192850.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3739805 3740582 . + . ID=gene-LU604_RS19930;Name=LU604_RS19930;end_range=3740582,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19930;old_locus_tag=LU604_19930;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3739805 3740582 . + 0 ID=cds-LU604_RS19930;Parent=gene-LU604_RS19930;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3740582,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS19930;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3741164 3742348 . - . ID=gene-LU604_RS19935;Name=LU604_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19935;old_locus_tag=LU604_19935 NZ_CP089942.1 Protein Homology CDS 3741164 3742348 . - 0 ID=cds-WP_016191150.1;Parent=gene-LU604_RS19935;Dbxref=Genbank:WP_016191150.1;Name=WP_016191150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014604810.1;locus_tag=LU604_RS19935;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_016191150.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3742573 3744072 . + . ID=gene-LU604_RS19940;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=LU604_RS19940;old_locus_tag=LU604_19940 NZ_CP089942.1 Protein Homology CDS 3742573 3744072 . + 0 ID=cds-WP_016191151.1;Parent=gene-LU604_RS19940;Dbxref=Genbank:WP_016191151.1;Name=WP_016191151.1;Ontology_term=GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000933250.1;locus_tag=LU604_RS19940;product=inorganic phosphate transporter PitA;protein_id=WP_016191151.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3744138 3744475 . - . ID=gene-LU604_RS19945;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=pseudogene;locus_tag=LU604_RS19945;old_locus_tag=LU604_19945;pseudo=true NZ_CP089942.1 Protein Homology CDS 3744138 3744475 . - 0 ID=cds-LU604_RS19945;Parent=gene-LU604_RS19945;Note=frameshifted%3B internal stop;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013510884.1;locus_tag=LU604_RS19945;product=universal stress protein UspB;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3744696 3745130 . + . ID=gene-LU604_RS19950;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=LU604_RS19950;old_locus_tag=LU604_19950 NZ_CP089942.1 Protein Homology CDS 3744696 3745130 . + 0 ID=cds-WP_016191152.1;Parent=gene-LU604_RS19950;Dbxref=Genbank:WP_016191152.1;Name=WP_016191152.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312394.1;locus_tag=LU604_RS19950;product=universal stress protein UspA;protein_id=WP_016191152.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3745336 3746091 . - . ID=gene-LU604_RS19955;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=LU604_RS19955;old_locus_tag=LU604_19955 NZ_CP089942.1 Protein Homology CDS 3745336 3746091 . - 0 ID=cds-WP_016191153.1;Parent=gene-LU604_RS19955;Dbxref=Genbank:WP_016191153.1;Name=WP_016191153.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204312.1;locus_tag=LU604_RS19955;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_016191153.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3746088 3748136 . - . ID=gene-LU604_RS19960;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=LU604_RS19960;old_locus_tag=LU604_19960 NZ_CP089942.1 Protein Homology CDS 3746088 3748136 . - 0 ID=cds-WP_016191154.1;Parent=gene-LU604_RS19960;Dbxref=Genbank:WP_016191154.1;Name=WP_016191154.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160938.1;locus_tag=LU604_RS19960;product=oligopeptidase A;protein_id=WP_016191154.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3748424 3748663 . + . ID=gene-LU604_RS19965;Name=LU604_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19965;old_locus_tag=LU604_19965 NZ_CP089942.1 Protein Homology CDS 3748424 3748663 . + 0 ID=cds-WP_232426867.1;Parent=gene-LU604_RS19965;Dbxref=Genbank:WP_232426867.1;Name=WP_232426867.1;Ontology_term=GO:0071586,GO:0004222,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: protein motif:HMM:NF014566.2;locus_tag=LU604_RS19965;product=CPBP family glutamic-type intramembrane protease;protein_id=WP_232426867.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3748853 3749599 . - . ID=gene-LU604_RS19970;Name=LU604_RS19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19970;old_locus_tag=LU604_19970 NZ_CP089942.1 Protein Homology CDS 3748853 3749599 . - 0 ID=cds-WP_233479119.1;Parent=gene-LU604_RS19970;Dbxref=Genbank:WP_233479119.1;Name=WP_233479119.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004169787.1;locus_tag=LU604_RS19970;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=WP_233479119.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3749915 3750757 . + . ID=gene-LU604_RS19975;Name=LU604_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS19975;old_locus_tag=LU604_19975 NZ_CP089942.1 Protein Homology CDS 3749915 3750757 . + 0 ID=cds-WP_233479120.1;Parent=gene-LU604_RS19975;Dbxref=Genbank:WP_233479120.1;Name=WP_233479120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417956.1;locus_tag=LU604_RS19975;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_233479120.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3750797 3751711 . - . ID=gene-LU604_RS19980;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=LU604_RS19980;old_locus_tag=LU604_19980 NZ_CP089942.1 Protein Homology CDS 3750797 3751711 . - 0 ID=cds-WP_016191158.1;Parent=gene-LU604_RS19980;Dbxref=Genbank:WP_016191158.1;Name=WP_016191158.1;Ontology_term=GO:0042779,GO:0016891;gbkey=CDS;gene=rnz;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-trailer cleavage|0042779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000419093.1;locus_tag=LU604_RS19980;product=ribonuclease Z;protein_id=WP_016191158.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3751868 3753220 . + . ID=gene-LU604_RS19985;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=LU604_RS19985;old_locus_tag=LU604_19985 NZ_CP089942.1 Protein Homology CDS 3751868 3753220 . + 0 ID=cds-WP_016191231.1;Parent=gene-LU604_RS19985;Dbxref=Genbank:WP_016191231.1;Name=WP_016191231.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=LU604_RS19985;product=glutathione-disulfide reductase;protein_id=WP_016191231.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3753555 3755738 . + . ID=gene-LU604_RS19990;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=LU604_RS19990;old_locus_tag=LU604_19990 NZ_CP089942.1 Protein Homology CDS 3753555 3755738 . + 0 ID=cds-WP_233479121.1;Parent=gene-LU604_RS19990;Dbxref=Genbank:WP_233479121.1;Name=WP_233479121.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418377.1;locus_tag=LU604_RS19990;product=catalase/peroxidase HPI;protein_id=WP_233479121.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3755976 3756763 . + . ID=gene-LU604_RS19995;Name=LU604_RS19995;end_range=3756763,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS19995;old_locus_tag=LU604_19995;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3755976 3756763 . + 0 ID=cds-LU604_RS19995;Parent=gene-LU604_RS19995;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3756763,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171269.1;locus_tag=LU604_RS19995;partial=true;product=alpha/beta hydrolase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3756841 3757809 . - . ID=gene-LU604_RS20000;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=LU604_RS20000;old_locus_tag=LU604_20000 NZ_CP089942.1 Protein Homology CDS 3756841 3757809 . - 0 ID=cds-WP_016191233.1;Parent=gene-LU604_RS20000;Dbxref=Genbank:WP_016191233.1;Name=WP_016191233.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542967.1;locus_tag=LU604_RS20000;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_016191233.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3757806 3758843 . - . ID=gene-LU604_RS20005;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=LU604_RS20005;old_locus_tag=LU604_20005 NZ_CP089942.1 Protein Homology CDS 3757806 3758843 . - 0 ID=cds-WP_046372142.1;Parent=gene-LU604_RS20005;Dbxref=Genbank:WP_046372142.1;Name=WP_046372142.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200287.1;locus_tag=LU604_RS20005;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_046372142.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3758968 3759083 . - . ID=gene-LU604_RS20010;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LU604_RS20010;old_locus_tag=LU604_20010 NZ_CP089942.1 cmsearch rRNA 3758968 3759083 . - . ID=rna-LU604_RS20010;Parent=gene-LU604_RS20010;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS20010;product=5S ribosomal RNA NZ_CP089942.1 cmsearch exon 3758968 3759083 . - . ID=exon-LU604_RS20010-1;Parent=rna-LU604_RS20010;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS20010;product=5S ribosomal RNA NZ_CP089942.1 RefSeq gene 3759290 3762192 . - . ID=gene-LU604_RS20015;Name=LU604_RS20015;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU604_RS20015;old_locus_tag=LU604_20015 NZ_CP089942.1 cmsearch rRNA 3759290 3762192 . - . ID=rna-LU604_RS20015;Parent=gene-LU604_RS20015;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS20015;product=23S ribosomal RNA NZ_CP089942.1 cmsearch exon 3759290 3762192 . - . ID=exon-LU604_RS20015-1;Parent=rna-LU604_RS20015;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS20015;product=23S ribosomal RNA NZ_CP089942.1 RefSeq gene 3762392 3762468 . - . ID=gene-LU604_RS20020;Name=LU604_RS20020;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS20020;old_locus_tag=LU604_20020 NZ_CP089942.1 tRNAscan-SE tRNA 3762392 3762468 . - . ID=rna-LU604_RS20020;Parent=gene-LU604_RS20020;anticodon=(pos:complement(3762432..3762434));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS20020;product=tRNA-Ala NZ_CP089942.1 tRNAscan-SE exon 3762392 3762468 . - . ID=exon-LU604_RS20020-1;Parent=rna-LU604_RS20020;anticodon=(pos:complement(3762432..3762434));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS20020;product=tRNA-Ala NZ_CP089942.1 RefSeq gene 3762611 3762687 . - . ID=gene-LU604_RS20025;Name=LU604_RS20025;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS20025;old_locus_tag=LU604_20025 NZ_CP089942.1 tRNAscan-SE tRNA 3762611 3762687 . - . ID=rna-LU604_RS20025;Parent=gene-LU604_RS20025;anticodon=(pos:complement(3762651..3762653));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS20025;product=tRNA-Ile NZ_CP089942.1 tRNAscan-SE exon 3762611 3762687 . - . ID=exon-LU604_RS20025-1;Parent=rna-LU604_RS20025;anticodon=(pos:complement(3762651..3762653));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS20025;product=tRNA-Ile NZ_CP089942.1 RefSeq gene 3762760 3764301 . - . ID=gene-LU604_RS20030;Name=LU604_RS20030;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU604_RS20030;old_locus_tag=LU604_20030 NZ_CP089942.1 cmsearch rRNA 3762760 3764301 . - . ID=rna-LU604_RS20030;Parent=gene-LU604_RS20030;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS20030;product=16S ribosomal RNA NZ_CP089942.1 cmsearch exon 3762760 3764301 . - . ID=exon-LU604_RS20030-1;Parent=rna-LU604_RS20030;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS20030;product=16S ribosomal RNA NZ_CP089942.1 RefSeq gene 3764682 3765548 . - . ID=gene-LU604_RS20035;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=LU604_RS20035;old_locus_tag=LU604_20035 NZ_CP089942.1 Protein Homology CDS 3764682 3765548 . - 0 ID=cds-WP_233479122.1;Parent=gene-LU604_RS20035;Dbxref=Genbank:WP_233479122.1;Name=WP_233479122.1;Ontology_term=GO:0006807,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191235.1;locus_tag=LU604_RS20035;product=glutamate racemase;protein_id=WP_233479122.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3766291 3767391 . + . ID=gene-LU604_RS20040;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=LU604_RS20040;old_locus_tag=LU604_20040 NZ_CP089942.1 Protein Homology CDS 3766291 3767391 . + 0 ID=cds-WP_016191236.1;Parent=gene-LU604_RS20040;Dbxref=Genbank:WP_016191236.1;Name=WP_016191236.1;Ontology_term=GO:0006400,GO:0030697;gbkey=CDS;gene=trmA;go_function=S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity|0030697||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041460630.1;locus_tag=LU604_RS20040;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_016191236.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3767638 3767769 . + . ID=gene-LU604_RS27050;Name=LU604_RS27050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27050 NZ_CP089942.1 GeneMarkS-2+ CDS 3767638 3767769 . + 0 ID=cds-WP_256371748.1;Parent=gene-LU604_RS27050;Dbxref=Genbank:WP_256371748.1;Name=WP_256371748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS27050;product=hypothetical protein;protein_id=WP_256371748.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3767766 3767939 . - . ID=gene-LU604_RS20045;Name=LU604_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20045;old_locus_tag=LU604_20045 NZ_CP089942.1 GeneMarkS-2+ CDS 3767766 3767939 . - 0 ID=cds-WP_016191240.1;Parent=gene-LU604_RS20045;Dbxref=Genbank:WP_016191240.1;Name=WP_016191240.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS20045;product=hypothetical protein;protein_id=WP_016191240.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3767939 3768727 . - . ID=gene-LU604_RS20050;Name=LU604_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20050;old_locus_tag=LU604_20050 NZ_CP089942.1 Protein Homology CDS 3767939 3768727 . - 0 ID=cds-WP_233479123.1;Parent=gene-LU604_RS20050;Dbxref=Genbank:WP_233479123.1;Name=WP_233479123.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF014380.2;locus_tag=LU604_RS20050;product=DNA-binding protein;protein_id=WP_233479123.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3768729 3768965 . - . ID=gene-LU604_RS20055;Name=LU604_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20055;old_locus_tag=LU604_20055 NZ_CP089942.1 Protein Homology CDS 3768729 3768965 . - 0 ID=cds-WP_233480850.1;Parent=gene-LU604_RS20055;Dbxref=Genbank:WP_233480850.1;Name=WP_233480850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191242.1;locus_tag=LU604_RS20055;product=helix-turn-helix domain-containing protein;protein_id=WP_233480850.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3769122 3769628 . + . ID=gene-LU604_RS20060;Name=LU604_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20060;old_locus_tag=LU604_20060 NZ_CP089942.1 Protein Homology CDS 3769122 3769628 . + 0 ID=cds-WP_233479124.1;Parent=gene-LU604_RS20060;Dbxref=Genbank:WP_233479124.1;Name=WP_233479124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303420.1;locus_tag=LU604_RS20060;product=transcriptional regulator;protein_id=WP_233479124.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3770045 3771253 . - . ID=gene-LU604_RS20065;Name=LU604_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20065;old_locus_tag=LU604_20065 NZ_CP089942.1 Protein Homology CDS 3770045 3771253 . - 0 ID=cds-WP_233479125.1;Parent=gene-LU604_RS20065;Dbxref=Genbank:WP_233479125.1;Name=WP_233479125.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS20065;product=IS256 family transposase;protein_id=WP_233479125.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3771402 3772037 . - . ID=gene-LU604_RS20070;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=LU604_RS20070;old_locus_tag=LU604_20070 NZ_CP089942.1 Protein Homology CDS 3771402 3772037 . - 0 ID=cds-WP_233479126.1;Parent=gene-LU604_RS20070;Dbxref=Genbank:WP_233479126.1;Name=WP_233479126.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191245.1;locus_tag=LU604_RS20070;product=HTH-type transcriptional repressor FabR;protein_id=WP_233479126.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3772230 3773630 . + . ID=gene-LU604_RS20075;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=LU604_RS20075;old_locus_tag=LU604_20075 NZ_CP089942.1 Protein Homology CDS 3772230 3773630 . + 0 ID=cds-WP_016191246.1;Parent=gene-LU604_RS20075;Dbxref=Genbank:WP_016191246.1;Name=WP_016191246.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (B-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=LU604_RS20075;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_016191246.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3773627 3774529 . - . ID=gene-LU604_RS20080;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=LU604_RS20080;old_locus_tag=LU604_20080 NZ_CP089942.1 Protein Homology CDS 3773627 3774529 . - 0 ID=cds-WP_016191247.1;Parent=gene-LU604_RS20080;Dbxref=Genbank:WP_016191247.1;Name=WP_016191247.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010308165.1;locus_tag=LU604_RS20080;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_016191247.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3774740 3775177 . - . ID=gene-LU604_RS20085;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS20085;old_locus_tag=LU604_20085;pseudo=true NZ_CP089942.1 Protein Homology CDS 3774740 3775177 . - 0 ID=cds-LU604_RS20085;Parent=gene-LU604_RS20085;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU604_RS20085;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3775532 3776905 . - . ID=gene-LU604_RS20090;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=LU604_RS20090;old_locus_tag=LU604_20090 NZ_CP089942.1 Protein Homology CDS 3775532 3776905 . - 0 ID=cds-WP_233479127.1;Parent=gene-LU604_RS20090;Dbxref=Genbank:WP_233479127.1;Name=WP_233479127.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154878.1;locus_tag=LU604_RS20090;product=argininosuccinate lyase;protein_id=WP_233479127.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3776990 3778204 . - . ID=gene-LU604_RS20095;Name=LU604_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20095;old_locus_tag=LU604_20095 NZ_CP089942.1 Protein Homology CDS 3776990 3778204 . - 0 ID=cds-WP_233481388.1;Parent=gene-LU604_RS20095;Dbxref=Genbank:WP_233481388.1;Name=WP_233481388.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666542.1;locus_tag=LU604_RS20095;product=argininosuccinate synthase;protein_id=WP_233481388.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3778224 3779000 . - . ID=gene-LU604_RS20100;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=LU604_RS20100;old_locus_tag=LU604_20100 NZ_CP089942.1 Protein Homology CDS 3778224 3779000 . - 0 ID=cds-WP_233479128.1;Parent=gene-LU604_RS20100;Dbxref=Genbank:WP_233479128.1;Name=WP_233479128.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575262.1;locus_tag=LU604_RS20100;product=acetylglutamate kinase;protein_id=WP_233479128.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3779016 3780020 . - . ID=gene-LU604_RS20105;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=LU604_RS20105;old_locus_tag=LU604_20105 NZ_CP089942.1 Protein Homology CDS 3779016 3780020 . - 0 ID=cds-WP_233479129.1;Parent=gene-LU604_RS20105;Dbxref=Genbank:WP_233479129.1;Name=WP_233479129.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278246.1;locus_tag=LU604_RS20105;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_233479129.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3780214 3781365 . + . ID=gene-LU604_RS20110;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=LU604_RS20110;old_locus_tag=LU604_20110 NZ_CP089942.1 Protein Homology CDS 3780214 3781365 . + 0 ID=cds-WP_233479130.1;Parent=gene-LU604_RS20110;Dbxref=Genbank:WP_233479130.1;Name=WP_233479130.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418392.1;locus_tag=LU604_RS20110;product=acetylornithine deacetylase;protein_id=WP_233479130.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3781731 3784382 . + . ID=gene-LU604_RS20115;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=LU604_RS20115;old_locus_tag=LU604_20115 NZ_CP089942.1 Protein Homology CDS 3781731 3784382 . + 0 ID=cds-WP_233479131.1;Parent=gene-LU604_RS20115;Dbxref=Genbank:WP_233479131.1;Name=WP_233479131.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=LU604_RS20115;product=phosphoenolpyruvate carboxylase;protein_id=WP_233479131.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3784795 3785691 . - . ID=gene-LU604_RS20120;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=LU604_RS20120;old_locus_tag=LU604_20120 NZ_CP089942.1 Protein Homology CDS 3784795 3785691 . - 0 ID=cds-WP_233479132.1;Parent=gene-LU604_RS20120;Dbxref=Genbank:WP_233479132.1;Name=WP_233479132.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014604771.1;locus_tag=LU604_RS20120;product=methylenetetrahydrofolate reductase;protein_id=WP_233479132.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3785905 3788334 . - . ID=gene-LU604_RS20125;Name=LU604_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20125;old_locus_tag=LU604_20125 NZ_CP089942.1 Protein Homology CDS 3785905 3788334 . - 0 ID=cds-WP_233479133.1;Parent=gene-LU604_RS20125;Dbxref=Genbank:WP_233479133.1;Name=WP_233479133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666535.1;locus_tag=LU604_RS20125;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_233479133.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3788337 3789497 . - . ID=gene-LU604_RS20130;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=LU604_RS20130;old_locus_tag=LU604_20130 NZ_CP089942.1 Protein Homology CDS 3788337 3789497 . - 0 ID=cds-WP_233479134.1;Parent=gene-LU604_RS20130;Dbxref=Genbank:WP_233479134.1;Name=WP_233479134.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455964.1;locus_tag=LU604_RS20130;product=cystathionine gamma-synthase;protein_id=WP_233479134.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3789741 3790058 . + . ID=gene-LU604_RS20135;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=LU604_RS20135;old_locus_tag=LU604_20135 NZ_CP089942.1 Protein Homology CDS 3789741 3790058 . + 0 ID=cds-WP_016191259.1;Parent=gene-LU604_RS20135;Dbxref=Genbank:WP_016191259.1;Name=WP_016191259.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=LU604_RS20135;product=met regulon transcriptional regulator MetJ;protein_id=WP_016191259.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3790624 3790839 . - . ID=gene-LU604_RS20140;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=LU604_RS20140;old_locus_tag=LU604_20140 NZ_CP089942.1 Protein Homology CDS 3790624 3790839 . - 0 ID=cds-WP_016191260.1;Parent=gene-LU604_RS20140;Dbxref=Genbank:WP_016191260.1;Name=WP_016191260.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847674.1;locus_tag=LU604_RS20140;product=50S ribosomal protein L31;protein_id=WP_016191260.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3791056 3793254 . + . ID=gene-LU604_RS20145;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=LU604_RS20145;old_locus_tag=LU604_20145 NZ_CP089942.1 Protein Homology CDS 3791056 3793254 . + 0 ID=cds-WP_233479135.1;Parent=gene-LU604_RS20145;Dbxref=Genbank:WP_233479135.1;Name=WP_233479135.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147463.1;locus_tag=LU604_RS20145;product=primosomal protein N';protein_id=WP_233479135.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3793456 3794493 . + . ID=gene-LU604_RS20150;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=LU604_RS20150;old_locus_tag=LU604_20150 NZ_CP089942.1 Protein Homology CDS 3793456 3794493 . + 0 ID=cds-WP_016191262.1;Parent=gene-LU604_RS20150;Dbxref=Genbank:WP_016191262.1;Name=WP_016191262.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013510987.1;locus_tag=LU604_RS20150;product=DNA-binding transcriptional regulator CytR;protein_id=WP_016191262.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3794665 3795558 . + . ID=gene-LU604_RS20155;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=LU604_RS20155;old_locus_tag=LU604_20155 NZ_CP089942.1 Protein Homology CDS 3794665 3795558 . + 0 ID=cds-WP_233479136.1;Parent=gene-LU604_RS20155;Dbxref=Genbank:WP_233479136.1;Name=WP_233479136.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsN;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666526.1;locus_tag=LU604_RS20155;product=cell division protein FtsN;protein_id=WP_233479136.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3795653 3796183 . + . ID=gene-LU604_RS20160;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=LU604_RS20160;old_locus_tag=LU604_20160 NZ_CP089942.1 Protein Homology CDS 3795653 3796183 . + 0 ID=cds-WP_016191264.1;Parent=gene-LU604_RS20160;Dbxref=Genbank:WP_016191264.1;Name=WP_016191264.1;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007704206.1;locus_tag=LU604_RS20160;product=ATP-dependent protease subunit HslV;protein_id=WP_016191264.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3796194 3797525 . + . ID=gene-LU604_RS20165;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=LU604_RS20165;old_locus_tag=LU604_20165 NZ_CP089942.1 Protein Homology CDS 3796194 3797525 . + 0 ID=cds-WP_233479137.1;Parent=gene-LU604_RS20165;Dbxref=Genbank:WP_233479137.1;Name=WP_233479137.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524;gbkey=CDS;gene=hslU;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=LU604_RS20165;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_233479137.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3797860 3798789 . + . ID=gene-LU604_RS20170;Name=LU604_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20170;old_locus_tag=LU604_20170 NZ_CP089942.1 Protein Homology CDS 3797860 3798789 . + 0 ID=cds-WP_233479138.1;Parent=gene-LU604_RS20170;Dbxref=Genbank:WP_233479138.1;Name=WP_233479138.1;Ontology_term=GO:0009234,GO:0046428,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase activity|0046428||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191266.1;locus_tag=LU604_RS20170;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_233479138.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3798896 3799381 . + . ID=gene-LU604_RS20175;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=LU604_RS20175;old_locus_tag=LU604_20175 NZ_CP089942.1 Protein Homology CDS 3798896 3799381 . + 0 ID=cds-WP_233479139.1;Parent=gene-LU604_RS20175;Dbxref=Genbank:WP_233479139.1;Name=WP_233479139.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=LU604_RS20175;product=ribonuclease E activity regulator RraA;protein_id=WP_233479139.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3799463 3799900 . - . ID=gene-LU604_RS20180;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS20180;old_locus_tag=LU604_20180;pseudo=true NZ_CP089942.1 Protein Homology CDS 3799463 3799900 . - 0 ID=cds-LU604_RS20180;Parent=gene-LU604_RS20180;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU604_RS20180;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3800062 3800301 . - . ID=gene-LU604_RS20185;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=LU604_RS20185;old_locus_tag=LU604_20185 NZ_CP089942.1 Protein Homology CDS 3800062 3800301 . - 0 ID=cds-WP_233479140.1;Parent=gene-LU604_RS20185;Dbxref=Genbank:WP_233479140.1;Name=WP_233479140.1;Ontology_term=GO:0043093,GO:0090529,GO:0005737;gbkey=CDS;gene=zapB;go_component=cytoplasm|0005737||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114846.1;locus_tag=LU604_RS20185;product=cell division protein ZapB;protein_id=WP_233479140.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3800736 3801584 . + . ID=gene-LU604_RS20190;Name=LU604_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20190;old_locus_tag=LU604_20190 NZ_CP089942.1 Protein Homology CDS 3800736 3801584 . + 0 ID=cds-WP_016191269.1;Parent=gene-LU604_RS20190;Dbxref=Genbank:WP_016191269.1;Name=WP_016191269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007885383.1;locus_tag=LU604_RS20190;product=aquaporin family protein;protein_id=WP_016191269.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3801617 3803131 . + . ID=gene-LU604_RS20195;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=LU604_RS20195;old_locus_tag=LU604_20195 NZ_CP089942.1 Protein Homology CDS 3801617 3803131 . + 0 ID=cds-WP_233479141.1;Parent=gene-LU604_RS20195;Dbxref=Genbank:WP_233479141.1;Name=WP_233479141.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191270.1;locus_tag=LU604_RS20195;product=glycerol kinase GlpK;protein_id=WP_233479141.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3803228 3804238 . + . ID=gene-LU604_RS20200;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=LU604_RS20200;old_locus_tag=LU604_20200 NZ_CP089942.1 Protein Homology CDS 3803228 3804238 . + 0 ID=cds-WP_233479142.1;Parent=gene-LU604_RS20200;Dbxref=Genbank:WP_233479142.1;Name=WP_233479142.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229467.1;locus_tag=LU604_RS20200;product=class II fructose-bisphosphatase;protein_id=WP_233479142.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3804422 3805168 . + . ID=gene-LU604_RS20205;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=LU604_RS20205;old_locus_tag=LU604_20205 NZ_CP089942.1 Protein Homology CDS 3804422 3805168 . + 0 ID=cds-WP_233479143.1;Parent=gene-LU604_RS20205;Dbxref=Genbank:WP_233479143.1;Name=WP_233479143.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851251.1;locus_tag=LU604_RS20205;product=ferredoxin--NADP(+) reductase;protein_id=WP_233479143.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3805169 3805584 . - . ID=gene-LU604_RS20210;Name=LU604_RS20210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20210;old_locus_tag=LU604_20210;pseudo=true NZ_CP089942.1 Protein Homology CDS 3805169 3805584 . - 0 ID=cds-LU604_RS20210;Parent=gene-LU604_RS20210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441864.1;locus_tag=LU604_RS20210;product=DUF805 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3805709 3806278 . + . ID=gene-LU604_RS20215;Name=LU604_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20215;old_locus_tag=LU604_20215 NZ_CP089942.1 Protein Homology CDS 3805709 3806278 . + 0 ID=cds-WP_233480851.1;Parent=gene-LU604_RS20215;Dbxref=Genbank:WP_233480851.1;Name=WP_233480851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191275.1;locus_tag=LU604_RS20215;product=DUF1454 family protein;protein_id=WP_233480851.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3806399 3807166 . + . ID=gene-LU604_RS20220;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=LU604_RS20220;old_locus_tag=LU604_20220 NZ_CP089942.1 Protein Homology CDS 3806399 3807166 . + 0 ID=cds-WP_233479144.1;Parent=gene-LU604_RS20220;Dbxref=Genbank:WP_233479144.1;Name=WP_233479144.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175887.1;locus_tag=LU604_RS20220;product=triose-phosphate isomerase;protein_id=WP_233479144.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3807737 3809326 . + . ID=gene-LU604_RS20225;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=LU604_RS20225;old_locus_tag=LU604_20225 NZ_CP089942.1 Protein Homology CDS 3807737 3809326 . + 0 ID=cds-WP_016191277.1;Parent=gene-LU604_RS20225;Dbxref=Genbank:WP_016191277.1;Name=WP_016191277.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200179.1;locus_tag=LU604_RS20225;product=malate dehydrogenase (quinone);protein_id=WP_016191277.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3809422 3809921 . - . ID=gene-LU604_RS20230;Name=LU604_RS20230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20230;old_locus_tag=LU604_20230;pseudo=true NZ_CP089942.1 Protein Homology CDS 3809422 3809921 . - 0 ID=cds-LU604_RS20230;Parent=gene-LU604_RS20230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852024.1;locus_tag=LU604_RS20230;product=LysE family translocator;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3810070 3810432 . - . ID=gene-LU604_RS20235;Name=LU604_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20235;old_locus_tag=LU604_20235 NZ_CP089942.1 Protein Homology CDS 3810070 3810432 . - 0 ID=cds-WP_232426870.1;Parent=gene-LU604_RS20235;Dbxref=Genbank:WP_232426870.1;Name=WP_232426870.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: protein motif:HMM:NF024809.2;locus_tag=LU604_RS20235;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_232426870.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3810509 3811014 . + . ID=gene-LU604_RS20240;Name=LU604_RS20240;end_range=3811014,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20240;old_locus_tag=LU604_20240;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3810509 3811014 . + 0 ID=cds-LU604_RS20240;Parent=gene-LU604_RS20240;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3811014,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154839.1;locus_tag=LU604_RS20240;partial=true;product=PhzF family phenazine biosynthesis protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3811146 3811324 . + . ID=gene-LU604_RS20245;Name=LU604_RS20245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20245;old_locus_tag=LU604_20245;pseudo=true NZ_CP089942.1 Protein Homology CDS 3811146 3811324 . + 0 ID=cds-LU604_RS20245;Parent=gene-LU604_RS20245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322936.1;locus_tag=LU604_RS20245;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3811333 3812532 . + . ID=gene-LU604_RS20250;Name=LU604_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20250;old_locus_tag=LU604_20250 NZ_CP089942.1 Protein Homology CDS 3811333 3812532 . + 0 ID=cds-WP_233478723.1-6;Parent=gene-LU604_RS20250;Dbxref=Genbank:WP_233478723.1;Name=WP_233478723.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS20250;product=IS91 family transposase;protein_id=WP_233478723.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3812878 3813798 . + . ID=gene-LU604_RS20255;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=LU604_RS20255;old_locus_tag=LU604_20255 NZ_CP089942.1 Protein Homology CDS 3812878 3813798 . + 0 ID=cds-WP_020322710.1;Parent=gene-LU604_RS20255;Dbxref=Genbank:WP_020322710.1;Name=WP_020322710.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000183364.1;locus_tag=LU604_RS20255;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_020322710.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3814138 3815163 . + . ID=gene-LU604_RS20260;Name=LU604_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20260;old_locus_tag=LU604_20260 NZ_CP089942.1 Protein Homology CDS 3814138 3815163 . + 0 ID=cds-WP_233479145.1;Parent=gene-LU604_RS20260;Dbxref=Genbank:WP_233479145.1;Name=WP_233479145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121390.1;locus_tag=LU604_RS20260;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_233479145.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3815236 3816414 . + . ID=gene-LU604_RS20265;Name=LU604_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20265;old_locus_tag=LU604_20265 NZ_CP089942.1 Protein Homology CDS 3815236 3816414 . + 0 ID=cds-WP_233479146.1;Parent=gene-LU604_RS20265;Dbxref=Genbank:WP_233479146.1;Name=WP_233479146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312169.2;locus_tag=LU604_RS20265;product=amino acid ABC transporter permease;protein_id=WP_233479146.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3816431 3817531 . + . ID=gene-LU604_RS20270;Name=LU604_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20270;old_locus_tag=LU604_20270 NZ_CP089942.1 Protein Homology CDS 3816431 3817531 . + 0 ID=cds-WP_020322715.1;Parent=gene-LU604_RS20270;Dbxref=Genbank:WP_020322715.1;Name=WP_020322715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359220.1;locus_tag=LU604_RS20270;product=amino acid ABC transporter permease;protein_id=WP_020322715.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3817579 3818304 . + . ID=gene-LU604_RS20275;Name=LU604_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20275;old_locus_tag=LU604_20275 NZ_CP089942.1 Protein Homology CDS 3817579 3818304 . + 0 ID=cds-WP_198292520.1;Parent=gene-LU604_RS20275;Dbxref=Genbank:WP_198292520.1;Name=WP_198292520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631384.1;locus_tag=LU604_RS20275;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_198292520.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3818703 3819280 . + . ID=gene-LU604_RS20280;Name=LU604_RS20280;end_range=3819280,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20280;old_locus_tag=LU604_20280;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3818703 3819280 . + 0 ID=cds-LU604_RS20280;Parent=gene-LU604_RS20280;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3819280,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_065945178.1;locus_tag=LU604_RS20280;partial=true;product=transposase family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3819458 3819573 . - . ID=gene-LU604_RS20285;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LU604_RS20285;old_locus_tag=LU604_20285 NZ_CP089942.1 cmsearch rRNA 3819458 3819573 . - . ID=rna-LU604_RS20285;Parent=gene-LU604_RS20285;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS20285;product=5S ribosomal RNA NZ_CP089942.1 cmsearch exon 3819458 3819573 . - . ID=exon-LU604_RS20285-1;Parent=rna-LU604_RS20285;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS20285;product=5S ribosomal RNA NZ_CP089942.1 RefSeq gene 3819780 3822682 . - . ID=gene-LU604_RS20290;Name=LU604_RS20290;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU604_RS20290;old_locus_tag=LU604_20290 NZ_CP089942.1 cmsearch rRNA 3819780 3822682 . - . ID=rna-LU604_RS20290;Parent=gene-LU604_RS20290;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS20290;product=23S ribosomal RNA NZ_CP089942.1 cmsearch exon 3819780 3822682 . - . ID=exon-LU604_RS20290-1;Parent=rna-LU604_RS20290;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS20290;product=23S ribosomal RNA NZ_CP089942.1 RefSeq gene 3822886 3822961 . - . ID=gene-LU604_RS20295;Name=LU604_RS20295;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS20295;old_locus_tag=LU604_20295 NZ_CP089942.1 tRNAscan-SE tRNA 3822886 3822961 . - . ID=rna-LU604_RS20295;Parent=gene-LU604_RS20295;anticodon=(pos:complement(3822925..3822927));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS20295;product=tRNA-Glu NZ_CP089942.1 tRNAscan-SE exon 3822886 3822961 . - . ID=exon-LU604_RS20295-1;Parent=rna-LU604_RS20295;anticodon=(pos:complement(3822925..3822927));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS20295;product=tRNA-Glu NZ_CP089942.1 RefSeq gene 3823034 3824575 . - . ID=gene-LU604_RS20300;Name=LU604_RS20300;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU604_RS20300;old_locus_tag=LU604_20300 NZ_CP089942.1 cmsearch rRNA 3823034 3824575 . - . ID=rna-LU604_RS20300;Parent=gene-LU604_RS20300;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS20300;product=16S ribosomal RNA NZ_CP089942.1 cmsearch exon 3823034 3824575 . - . ID=exon-LU604_RS20300-1;Parent=rna-LU604_RS20300;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS20300;product=16S ribosomal RNA NZ_CP089942.1 RefSeq gene 3824975 3825535 . - . ID=gene-LU604_RS20305;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=LU604_RS20305;old_locus_tag=LU604_20305 NZ_CP089942.1 Protein Homology CDS 3824975 3825535 . - 0 ID=cds-WP_233479147.1;Parent=gene-LU604_RS20305;Dbxref=Genbank:WP_233479147.1;Name=WP_233479147.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852609.1;locus_tag=LU604_RS20305;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_233479147.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3825716 3826747 . + . ID=gene-LU604_RS20310;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=LU604_RS20310;old_locus_tag=LU604_20310 NZ_CP089942.1 Protein Homology CDS 3825716 3826747 . + 0 ID=cds-WP_233479148.1;Parent=gene-LU604_RS20310;Dbxref=Genbank:WP_233479148.1;Name=WP_233479148.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009898,GO:0055052;gbkey=CDS;gene=metN;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308228.1;locus_tag=LU604_RS20310;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_233479148.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3826740 3827393 . + . ID=gene-LU604_RS20315;Name=LU604_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20315;old_locus_tag=LU604_20315 NZ_CP089942.1 Protein Homology CDS 3826740 3827393 . + 0 ID=cds-WP_016190313.1;Parent=gene-LU604_RS20315;Dbxref=Genbank:WP_016190313.1;Name=WP_016190313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=LU604_RS20315;product=methionine ABC transporter permease MetI;protein_id=WP_016190313.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3827424 3828239 . + . ID=gene-LU604_RS20320;Name=LU604_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20320;old_locus_tag=LU604_20320 NZ_CP089942.1 Protein Homology CDS 3827424 3828239 . + 0 ID=cds-WP_233479149.1;Parent=gene-LU604_RS20320;Dbxref=Genbank:WP_233479149.1;Name=WP_233479149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016534993.1;locus_tag=LU604_RS20320;product=MetQ/NlpA family lipoprotein;protein_id=WP_233479149.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3828381 3828785 . + . ID=gene-LU604_RS20325;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=LU604_RS20325;old_locus_tag=LU604_20325 NZ_CP089942.1 Protein Homology CDS 3828381 3828785 . + 0 ID=cds-WP_233479150.1;Parent=gene-LU604_RS20325;Dbxref=Genbank:WP_233479150.1;Name=WP_233479150.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212158.1;locus_tag=LU604_RS20325;product=Rcs stress response system protein RcsF;protein_id=WP_233479150.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3828782 3829489 . + . ID=gene-LU604_RS20330;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=LU604_RS20330;old_locus_tag=LU604_20330 NZ_CP089942.1 Protein Homology CDS 3828782 3829489 . + 0 ID=cds-WP_016190316.1;Parent=gene-LU604_RS20330;Dbxref=Genbank:WP_016190316.1;Name=WP_016190316.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024710.1;locus_tag=LU604_RS20330;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_016190316.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3829599 3831317 . + . ID=gene-LU604_RS20335;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=LU604_RS20335;old_locus_tag=LU604_20335 NZ_CP089942.1 Protein Homology CDS 3829599 3831317 . + 0 ID=cds-WP_233479151.1;Parent=gene-LU604_RS20335;Dbxref=Genbank:WP_233479151.1;Name=WP_233479151.1;Ontology_term=GO:0006433,GO:0004827,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190317.1;locus_tag=LU604_RS20335;product=proline--tRNA ligase;protein_id=WP_233479151.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3831707 3832126 . - . ID=gene-LU604_RS20340;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=LU604_RS20340;old_locus_tag=LU604_20340 NZ_CP089942.1 Protein Homology CDS 3831707 3832126 . - 0 ID=cds-WP_016190318.1;Parent=gene-LU604_RS20340;Dbxref=Genbank:WP_016190318.1;Name=WP_016190318.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810027.1;locus_tag=LU604_RS20340;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_016190318.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3832123 3832677 . - . ID=gene-LU604_RS20345;Name=LU604_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20345;old_locus_tag=LU604_20345 NZ_CP089942.1 Protein Homology CDS 3832123 3832677 . - 0 ID=cds-WP_016190319.1;Parent=gene-LU604_RS20345;Dbxref=Genbank:WP_016190319.1;Name=WP_016190319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200865.1;locus_tag=LU604_RS20345;product=YaeQ family protein;protein_id=WP_016190319.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3832807 3833007 . + . ID=gene-LU604_RS20350;Name=LU604_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20350;old_locus_tag=LU604_20350 NZ_CP089942.1 Protein Homology CDS 3832807 3833007 . + 0 ID=cds-WP_016190320.1;Parent=gene-LU604_RS20350;Dbxref=Genbank:WP_016190320.1;Name=WP_016190320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146467.1;locus_tag=LU604_RS20350;product=YaeP family protein;protein_id=WP_016190320.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3832994 3833257 . + . ID=gene-LU604_RS20355;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=LU604_RS20355;old_locus_tag=LU604_20355 NZ_CP089942.1 Protein Homology CDS 3832994 3833257 . + 0 ID=cds-WP_016190321.1;Parent=gene-LU604_RS20355;Dbxref=Genbank:WP_016190321.1;Name=WP_016190321.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159420.1;locus_tag=LU604_RS20355;product=Rho-binding antiterminator;protein_id=WP_016190321.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3833402 3834742 . - . ID=gene-LU604_RS20360;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=LU604_RS20360;old_locus_tag=LU604_20360 NZ_CP089942.1 Protein Homology CDS 3833402 3834742 . - 0 ID=cds-WP_233479152.1;Parent=gene-LU604_RS20360;Dbxref=Genbank:WP_233479152.1;Name=WP_233479152.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190322.1;locus_tag=LU604_RS20360;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_233479152.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3834801 3835190 . - . ID=gene-LU604_RS20365;Name=LU604_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20365;old_locus_tag=LU604_20365 NZ_CP089942.1 Protein Homology CDS 3834801 3835190 . - 0 ID=cds-WP_233479153.1;Parent=gene-LU604_RS20365;Dbxref=Genbank:WP_233479153.1;Name=WP_233479153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190323.1;locus_tag=LU604_RS20365;product=VOC family protein;protein_id=WP_233479153.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3835399 3836133 . - . ID=gene-LU604_RS20370;Name=LU604_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20370;old_locus_tag=LU604_20370 NZ_CP089942.1 Protein Homology CDS 3835399 3836133 . - 0 ID=cds-WP_233480852.1;Parent=gene-LU604_RS20370;Dbxref=Genbank:WP_233480852.1;Name=WP_233480852.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018460.2;locus_tag=LU604_RS20370;product=A24 family peptidase;protein_id=WP_233480852.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3836750 3837709 . - . ID=gene-LU604_RS20375;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=LU604_RS20375;old_locus_tag=LU604_20375 NZ_CP089942.1 Protein Homology CDS 3836750 3837709 . - 0 ID=cds-WP_016190325.1;Parent=gene-LU604_RS20375;Dbxref=Genbank:WP_016190325.1;Name=WP_016190325.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=LU604_RS20375;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_016190325.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3837721 3841203 . - . ID=gene-LU604_RS20380;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=LU604_RS20380;old_locus_tag=LU604_20380 NZ_CP089942.1 Protein Homology CDS 3837721 3841203 . - 0 ID=cds-WP_016190326.1;Parent=gene-LU604_RS20380;Dbxref=Genbank:WP_016190326.1;Name=WP_016190326.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225231.1;locus_tag=LU604_RS20380;product=DNA polymerase III subunit alpha;protein_id=WP_016190326.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3841236 3841859 . - . ID=gene-LU604_RS20385;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=LU604_RS20385;old_locus_tag=LU604_20385 NZ_CP089942.1 Protein Homology CDS 3841236 3841859 . - 0 ID=cds-WP_233479154.1;Parent=gene-LU604_RS20385;Dbxref=Genbank:WP_233479154.1;Name=WP_233479154.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190327.1;locus_tag=LU604_RS20385;product=ribonuclease HII;protein_id=WP_233479154.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3841856 3843049 . - . ID=gene-LU604_RS20390;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=LU604_RS20390;old_locus_tag=LU604_20390 NZ_CP089942.1 Protein Homology CDS 3841856 3843049 . - 0 ID=cds-WP_046372209.1;Parent=gene-LU604_RS20390;Dbxref=Genbank:WP_046372209.1;Name=WP_046372209.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000132067.1;locus_tag=LU604_RS20390;product=lipid-A-disaccharide synthase;protein_id=WP_046372209.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3843062 3843850 . - . ID=gene-LU604_RS20395;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=LU604_RS20395;old_locus_tag=LU604_20395 NZ_CP089942.1 Protein Homology CDS 3843062 3843850 . - 0 ID=cds-WP_016190329.1;Parent=gene-LU604_RS20395;Dbxref=Genbank:WP_016190329.1;Name=WP_016190329.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=LU604_RS20395;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_016190329.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3843854 3844309 . - . ID=gene-LU604_RS20400;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=LU604_RS20400;old_locus_tag=LU604_20400 NZ_CP089942.1 Protein Homology CDS 3843854 3844309 . - 0 ID=cds-WP_016190330.1;Parent=gene-LU604_RS20400;Dbxref=Genbank:WP_016190330.1;Name=WP_016190330.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436969.1;locus_tag=LU604_RS20400;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_016190330.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3844472 3845494 . - . ID=gene-LU604_RS20405;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=LU604_RS20405;old_locus_tag=LU604_20405 NZ_CP089942.1 Protein Homology CDS 3844472 3845494 . - 0 ID=cds-WP_233479155.1;Parent=gene-LU604_RS20405;Dbxref=Genbank:WP_233479155.1;Name=WP_233479155.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170608.1;locus_tag=LU604_RS20405;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_233479155.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3845498 3845995 . - . ID=gene-LU604_RS20410;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=LU604_RS20410;old_locus_tag=LU604_20410 NZ_CP089942.1 Protein Homology CDS 3845498 3845995 . - 0 ID=cds-WP_016190332.1;Parent=gene-LU604_RS20410;Dbxref=Genbank:WP_016190332.1;Name=WP_016190332.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212140.1;locus_tag=LU604_RS20410;product=molecular chaperone Skp;protein_id=WP_016190332.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3846158 3848560 . - . ID=gene-LU604_RS20415;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=LU604_RS20415;old_locus_tag=LU604_20415 NZ_CP089942.1 Protein Homology CDS 3846158 3848560 . - 0 ID=cds-WP_233479156.1;Parent=gene-LU604_RS20415;Dbxref=Genbank:WP_233479156.1;Name=WP_233479156.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440646.1;locus_tag=LU604_RS20415;product=outer membrane protein assembly factor BamA;protein_id=WP_233479156.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3848616 3849965 . - . ID=gene-LU604_RS20420;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=LU604_RS20420;old_locus_tag=LU604_20420 NZ_CP089942.1 Protein Homology CDS 3848616 3849965 . - 0 ID=cds-WP_233479157.1;Parent=gene-LU604_RS20420;Dbxref=Genbank:WP_233479157.1;Name=WP_233479157.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=LU604_RS20420;product=sigma E protease regulator RseP;protein_id=WP_233479157.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3849975 3850832 . - . ID=gene-LU604_RS20425;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=LU604_RS20425;old_locus_tag=LU604_20425 NZ_CP089942.1 Protein Homology CDS 3849975 3850832 . - 0 ID=cds-WP_233479158.1;Parent=gene-LU604_RS20425;Dbxref=Genbank:WP_233479158.1;Name=WP_233479158.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190335.1;locus_tag=LU604_RS20425;product=phosphatidate cytidylyltransferase;protein_id=WP_233479158.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3850851 3851603 . - . ID=gene-LU604_RS20430;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=LU604_RS20430;old_locus_tag=LU604_20430 NZ_CP089942.1 Protein Homology CDS 3850851 3851603 . - 0 ID=cds-WP_016190336.1;Parent=gene-LU604_RS20430;Dbxref=Genbank:WP_016190336.1;Name=WP_016190336.1;Ontology_term=GO:0043164,GO:0002094,GO:0008834;gbkey=CDS;gene=ispU;go_function=polyprenyltransferase activity|0002094||IEA,di-trans%2Cpoly-cis-decaprenylcistransferase activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017348525.1;locus_tag=LU604_RS20430;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_016190336.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3851799 3852995 . - . ID=gene-LU604_RS20435;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=LU604_RS20435;old_locus_tag=LU604_20435 NZ_CP089942.1 Protein Homology CDS 3851799 3852995 . - 0 ID=cds-WP_233479159.1;Parent=gene-LU604_RS20435;Dbxref=Genbank:WP_233479159.1;Name=WP_233479159.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190337.1;locus_tag=LU604_RS20435;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_233479159.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3853127 3853684 . - . ID=gene-LU604_RS20440;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=LU604_RS20440;old_locus_tag=LU604_20440 NZ_CP089942.1 Protein Homology CDS 3853127 3853684 . - 0 ID=cds-WP_016190338.1;Parent=gene-LU604_RS20440;Dbxref=Genbank:WP_016190338.1;Name=WP_016190338.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225219.1;locus_tag=LU604_RS20440;product=ribosome recycling factor;protein_id=WP_016190338.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3853819 3854544 . - . ID=gene-LU604_RS20445;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=LU604_RS20445;old_locus_tag=LU604_20445 NZ_CP089942.1 Protein Homology CDS 3853819 3854544 . - 0 ID=cds-WP_016190339.1;Parent=gene-LU604_RS20445;Dbxref=Genbank:WP_016190339.1;Name=WP_016190339.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931940.1;locus_tag=LU604_RS20445;product=UMP kinase;protein_id=WP_016190339.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3854543 3854701 . + . ID=gene-LU604_RS20450;Name=LU604_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20450;old_locus_tag=LU604_20450 NZ_CP089942.1 GeneMarkS-2+ CDS 3854543 3854701 . + 0 ID=cds-WP_233479160.1;Parent=gene-LU604_RS20450;Dbxref=Genbank:WP_233479160.1;Name=WP_233479160.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS20450;product=hypothetical protein;protein_id=WP_233479160.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3854698 3855549 . - . ID=gene-LU604_RS20455;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=LU604_RS20455;old_locus_tag=LU604_20455 NZ_CP089942.1 Protein Homology CDS 3854698 3855549 . - 0 ID=cds-WP_016190340.1;Parent=gene-LU604_RS20455;Dbxref=Genbank:WP_016190340.1;Name=WP_016190340.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459222.1;locus_tag=LU604_RS20455;product=translation elongation factor Ts;protein_id=WP_016190340.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3855858 3856583 . - . ID=gene-LU604_RS20460;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=LU604_RS20460;old_locus_tag=LU604_20460 NZ_CP089942.1 Protein Homology CDS 3855858 3856583 . - 0 ID=cds-WP_016190341.1;Parent=gene-LU604_RS20460;Dbxref=Genbank:WP_016190341.1;Name=WP_016190341.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=LU604_RS20460;product=30S ribosomal protein S2;protein_id=WP_016190341.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3856906 3857700 . + . ID=gene-LU604_RS20465;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=LU604_RS20465;old_locus_tag=LU604_20465 NZ_CP089942.1 Protein Homology CDS 3856906 3857700 . + 0 ID=cds-WP_016190342.1;Parent=gene-LU604_RS20465;Dbxref=Genbank:WP_016190342.1;Name=WP_016190342.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159481.1;locus_tag=LU604_RS20465;product=type I methionyl aminopeptidase;protein_id=WP_016190342.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3857898 3860552 . + . ID=gene-LU604_RS20470;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=LU604_RS20470;old_locus_tag=LU604_20470 NZ_CP089942.1 Protein Homology CDS 3857898 3860552 . + 0 ID=cds-WP_233479161.1;Parent=gene-LU604_RS20470;Dbxref=Genbank:WP_233479161.1;Name=WP_233479161.1;Ontology_term=GO:0006807,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190343.1;locus_tag=LU604_RS20470;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_233479161.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3860649 3861473 . + . ID=gene-LU604_RS20475;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=LU604_RS20475;old_locus_tag=LU604_20475 NZ_CP089942.1 Protein Homology CDS 3860649 3861473 . + 0 ID=cds-WP_233479162.1;Parent=gene-LU604_RS20475;Dbxref=Genbank:WP_233479162.1;Name=WP_233479162.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=LU604_RS20475;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_233479162.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3861795 3862187 . + . ID=gene-LU604_RS20480;Name=LU604_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20480;old_locus_tag=LU604_20480 NZ_CP089942.1 Protein Homology CDS 3861795 3862187 . + 0 ID=cds-WP_016190345.1;Parent=gene-LU604_RS20480;Dbxref=Genbank:WP_016190345.1;Name=WP_016190345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440633.1;locus_tag=LU604_RS20480;product=DUF3461 family protein;protein_id=WP_016190345.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3862286 3863443 . - . ID=gene-LU604_RS20485;Name=LU604_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20485;old_locus_tag=LU604_20485 NZ_CP089942.1 Protein Homology CDS 3862286 3863443 . - 0 ID=cds-WP_016190346.1;Parent=gene-LU604_RS20485;Dbxref=Genbank:WP_016190346.1;Name=WP_016190346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190346.1;locus_tag=LU604_RS20485;product=CdaR family transcriptional regulator;protein_id=WP_016190346.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3863900 3865333 . - . ID=gene-LU604_RS20490;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=LU604_RS20490;old_locus_tag=LU604_20490 NZ_CP089942.1 Protein Homology CDS 3863900 3865333 . - 0 ID=cds-WP_233479163.1;Parent=gene-LU604_RS20490;Dbxref=Genbank:WP_233479163.1;Name=WP_233479163.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011073684.1;locus_tag=LU604_RS20490;product=serine endoprotease DegP;protein_id=WP_233479163.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3865480 3866994 . - . ID=gene-LU604_RS20495;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=LU604_RS20495;old_locus_tag=LU604_20495 NZ_CP089942.1 Protein Homology CDS 3865480 3866994 . - 0 ID=cds-WP_233479164.1;Parent=gene-LU604_RS20495;Dbxref=Genbank:WP_233479164.1;Name=WP_233479164.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811516.1;locus_tag=LU604_RS20495;product=dGTPase;protein_id=WP_233479164.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3867176 3867874 . + . ID=gene-LU604_RS20500;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=LU604_RS20500;old_locus_tag=LU604_20500 NZ_CP089942.1 Protein Homology CDS 3867176 3867874 . + 0 ID=cds-WP_233479165.1;Parent=gene-LU604_RS20500;Dbxref=Genbank:WP_233479165.1;Name=WP_233479165.1;Ontology_term=GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190349.1;locus_tag=LU604_RS20500;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_233479165.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3868622 3868966 . - . ID=gene-LU604_RS20505;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=LU604_RS20505;old_locus_tag=LU604_20505 NZ_CP089942.1 Protein Homology CDS 3868622 3868966 . - 0 ID=cds-WP_016190350.1;Parent=gene-LU604_RS20505;Dbxref=Genbank:WP_016190350.1;Name=WP_016190350.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=LU604_RS20505;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_016190350.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3869054 3869274 . - . ID=gene-LU604_RS20510;Name=LU604_RS20510;end_range=3869274,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20510;old_locus_tag=LU604_20510;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3869054 3869274 . - 0 ID=cds-LU604_RS20510;Parent=gene-LU604_RS20510;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020;end_range=3869274,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010670451.1;locus_tag=LU604_RS20510;partial=true;product=chloride channel protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3869319 3870527 . - . ID=gene-LU604_RS20515;Name=LU604_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20515;old_locus_tag=LU604_20515 NZ_CP089942.1 Protein Homology CDS 3869319 3870527 . - 0 ID=cds-WP_233481389.1-2;Parent=gene-LU604_RS20515;Dbxref=Genbank:WP_233481389.1;Name=WP_233481389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368856.1;locus_tag=LU604_RS20515;product=transposase;protein_id=WP_233481389.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3870551 3870967 . + . ID=gene-LU604_RS20520;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS20520;old_locus_tag=LU604_20520 NZ_CP089942.1 Protein Homology CDS 3870551 3870967 . + 0 ID=cds-WP_233479166.1-5;Parent=gene-LU604_RS20520;Dbxref=Genbank:WP_233479166.1;Name=WP_233479166.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368599.1;locus_tag=LU604_RS20520;product=IS200/IS605 family transposase;protein_id=WP_233479166.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3871030 3872074 . - . ID=gene-LU604_RS20525;Name=LU604_RS20525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20525;old_locus_tag=LU604_20525;partial=true;pseudo=true;start_range=.,3871030 NZ_CP089942.1 Protein Homology CDS 3871030 3872074 . - 0 ID=cds-LU604_RS20525;Parent=gene-LU604_RS20525;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200833.1;locus_tag=LU604_RS20525;partial=true;product=chloride channel protein;pseudo=true;start_range=.,3871030;transl_table=11 NZ_CP089942.1 RefSeq gene 3872246 3873529 . + . ID=gene-LU604_RS20530;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=LU604_RS20530;old_locus_tag=LU604_20530 NZ_CP089942.1 Protein Homology CDS 3872246 3873529 . + 0 ID=cds-WP_233479167.1;Parent=gene-LU604_RS20530;Dbxref=Genbank:WP_233479167.1;Name=WP_233479167.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200832.1;locus_tag=LU604_RS20530;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_233479167.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3873610 3875559 . - . ID=gene-LU604_RS20535;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=LU604_RS20535;old_locus_tag=LU604_20535 NZ_CP089942.1 Protein Homology CDS 3873610 3875559 . - 0 ID=cds-WP_233480854.1;Parent=gene-LU604_RS20535;Dbxref=Genbank:WP_233480854.1;Name=WP_233480854.1;gbkey=CDS;gene=fhuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004958904.1;locus_tag=LU604_RS20535;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_233480854.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3875589 3876470 . - . ID=gene-LU604_RS20540;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=LU604_RS20540;old_locus_tag=LU604_20540 NZ_CP089942.1 Protein Homology CDS 3875589 3876470 . - 0 ID=cds-WP_233479168.1;Parent=gene-LU604_RS20540;Dbxref=Genbank:WP_233479168.1;Name=WP_233479168.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190356.1;locus_tag=LU604_RS20540;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_233479168.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3876485 3877279 . - . ID=gene-LU604_RS20545;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=LU604_RS20545;old_locus_tag=LU604_20545 NZ_CP089942.1 Protein Homology CDS 3876485 3877279 . - 0 ID=cds-WP_233480855.1;Parent=gene-LU604_RS20545;Dbxref=Genbank:WP_233480855.1;Name=WP_233480855.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159512.1;locus_tag=LU604_RS20545;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_233480855.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3877643 3880126 . - . ID=gene-LU604_RS20550;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=LU604_RS20550;old_locus_tag=LU604_20550 NZ_CP089942.1 Protein Homology CDS 3877643 3880126 . - 0 ID=cds-WP_233479169.1;Parent=gene-LU604_RS20550;Dbxref=Genbank:WP_233479169.1;Name=WP_233479169.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159532.1;locus_tag=LU604_RS20550;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_233479169.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3880222 3882663 . - . ID=gene-LU604_RS20555;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=pseudogene;locus_tag=LU604_RS20555;old_locus_tag=LU604_20555;pseudo=true NZ_CP089942.1 Protein Homology CDS 3880222 3882663 . - 0 ID=cds-LU604_RS20555;Parent=gene-LU604_RS20555;Note=internal stop;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190358.1;locus_tag=LU604_RS20555;product=ATP-dependent helicase HrpB;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3882741 3883280 . + . ID=gene-LU604_RS20560;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=LU604_RS20560;old_locus_tag=LU604_20560 NZ_CP089942.1 Protein Homology CDS 3882741 3883280 . + 0 ID=cds-WP_233479170.1;Parent=gene-LU604_RS20560;Dbxref=Genbank:WP_233479170.1;Name=WP_233479170.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,2'-5'-RNA ligase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190359.1;locus_tag=LU604_RS20560;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_233479170.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3883277 3883981 . + . ID=gene-LU604_RS20565;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=LU604_RS20565;old_locus_tag=LU604_20565 NZ_CP089942.1 Protein Homology CDS 3883277 3883981 . + 0 ID=cds-WP_016190360.1;Parent=gene-LU604_RS20565;Dbxref=Genbank:WP_016190360.1;Name=WP_016190360.1;Ontology_term=GO:0000023,GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;go_process=maltose metabolic process|0000023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010254038.1;locus_tag=LU604_RS20565;product=DNA/RNA nuclease SfsA;protein_id=WP_016190360.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3884152 3884607 . + . ID=gene-LU604_RS20570;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=LU604_RS20570;old_locus_tag=LU604_20570 NZ_CP089942.1 Protein Homology CDS 3884152 3884607 . + 0 ID=cds-WP_016190361.1;Parent=gene-LU604_RS20570;Dbxref=Genbank:WP_016190361.1;Name=WP_016190361.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=LU604_RS20570;product=RNA polymerase-binding protein DksA;protein_id=WP_016190361.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3884744 3885649 . + . ID=gene-LU604_RS20575;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=LU604_RS20575;old_locus_tag=LU604_20575 NZ_CP089942.1 Protein Homology CDS 3884744 3885649 . + 0 ID=cds-WP_233479171.1;Parent=gene-LU604_RS20575;Dbxref=Genbank:WP_233479171.1;Name=WP_233479171.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190362.1;locus_tag=LU604_RS20575;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_233479171.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3885756 3887171 . + . ID=gene-LU604_RS20580;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=LU604_RS20580;old_locus_tag=LU604_20580 NZ_CP089942.1 Protein Homology CDS 3885756 3887171 . + 0 ID=cds-WP_232426844.1;Parent=gene-LU604_RS20580;Dbxref=Genbank:WP_232426844.1;Name=WP_232426844.1;Ontology_term=GO:0006378,GO:0003723,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012885783.1;locus_tag=LU604_RS20580;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_232426844.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3887168 3887647 . + . ID=gene-LU604_RS20585;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=LU604_RS20585;old_locus_tag=LU604_20585 NZ_CP089942.1 Protein Homology CDS 3887168 3887647 . + 0 ID=cds-WP_233479172.1;Parent=gene-LU604_RS20585;Dbxref=Genbank:WP_233479172.1;Name=WP_233479172.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542095.1;locus_tag=LU604_RS20585;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_233479172.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3887708 3888502 . + . ID=gene-LU604_RS20590;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=LU604_RS20590;old_locus_tag=LU604_20590 NZ_CP089942.1 Protein Homology CDS 3887708 3888502 . + 0 ID=cds-WP_233479173.1;Parent=gene-LU604_RS20590;Dbxref=Genbank:WP_233479173.1;Name=WP_233479173.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414676.1;locus_tag=LU604_RS20590;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_233479173.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3888518 3889372 . + . ID=gene-LU604_RS20595;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=LU604_RS20595;old_locus_tag=LU604_20595 NZ_CP089942.1 Protein Homology CDS 3888518 3889372 . + 0 ID=cds-WP_016190366.1;Parent=gene-LU604_RS20595;Dbxref=Genbank:WP_016190366.1;Name=WP_016190366.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456066.1;locus_tag=LU604_RS20595;product=pantoate--beta-alanine ligase;protein_id=WP_016190366.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3889442 3889822 . + . ID=gene-LU604_RS20600;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=LU604_RS20600;old_locus_tag=LU604_20600 NZ_CP089942.1 Protein Homology CDS 3889442 3889822 . + 0 ID=cds-WP_016190367.1;Parent=gene-LU604_RS20600;Dbxref=Genbank:WP_016190367.1;Name=WP_016190367.1;Ontology_term=GO:0015940,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=LU604_RS20600;product=aspartate 1-decarboxylase;protein_id=WP_016190367.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3889891 3890337 . - . ID=gene-LU604_RS20605;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS20605;old_locus_tag=LU604_20605 NZ_CP089942.1 Protein Homology CDS 3889891 3890337 . - 0 ID=cds-WP_233481390.1;Parent=gene-LU604_RS20605;Dbxref=Genbank:WP_233481390.1;Name=WP_233481390.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192470.1;locus_tag=LU604_RS20605;product=IS200/IS605 family transposase;protein_id=WP_233481390.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3890573 3891343 . - . ID=gene-LU604_RS20610;Name=LU604_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20610;old_locus_tag=LU604_20610 NZ_CP089942.1 Protein Homology CDS 3890573 3891343 . - 0 ID=cds-WP_016190369.1;Parent=gene-LU604_RS20610;Dbxref=Genbank:WP_016190369.1;Name=WP_016190369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200815.1;locus_tag=LU604_RS20610;product=ABC transporter permease;protein_id=WP_016190369.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3891340 3892266 . - . ID=gene-LU604_RS20615;Name=LU604_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20615;old_locus_tag=LU604_20615 NZ_CP089942.1 Protein Homology CDS 3891340 3892266 . - 0 ID=cds-WP_016190370.1;Parent=gene-LU604_RS20615;Dbxref=Genbank:WP_016190370.1;Name=WP_016190370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004387655.1;locus_tag=LU604_RS20615;product=ABC transporter ATP-binding protein;protein_id=WP_016190370.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3892373 3893038 . + . ID=gene-LU604_RS20620;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=LU604_RS20620;old_locus_tag=LU604_20620 NZ_CP089942.1 Protein Homology CDS 3892373 3893038 . + 0 ID=cds-WP_016190371.1;Parent=gene-LU604_RS20620;Dbxref=Genbank:WP_016190371.1;Name=WP_016190371.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200813.1;locus_tag=LU604_RS20620;product=carbonate dehydratase;protein_id=WP_016190371.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3893100 3893636 . - . ID=gene-LU604_RS20625;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=LU604_RS20625;old_locus_tag=LU604_20625 NZ_CP089942.1 Protein Homology CDS 3893100 3893636 . - 0 ID=cds-WP_233479175.1;Parent=gene-LU604_RS20625;Dbxref=Genbank:WP_233479175.1;Name=WP_233479175.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190372.1;locus_tag=LU604_RS20625;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_233479175.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3894221 3895843 . - . ID=gene-LU604_RS20630;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=LU604_RS20630;old_locus_tag=LU604_20630 NZ_CP089942.1 Protein Homology CDS 3894221 3895843 . - 0 ID=cds-WP_233480856.1;Parent=gene-LU604_RS20630;Dbxref=Genbank:WP_233480856.1;Name=WP_233480856.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190373.1;locus_tag=LU604_RS20630;product=multicopper oxidase CueO;protein_id=WP_233480856.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3896029 3896376 . + . ID=gene-LU604_RS20635;Name=LU604_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20635;old_locus_tag=LU604_20635 NZ_CP089942.1 Protein Homology CDS 3896029 3896376 . + 0 ID=cds-WP_233479176.1;Parent=gene-LU604_RS20635;Dbxref=Genbank:WP_233479176.1;Name=WP_233479176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606565.1;locus_tag=LU604_RS20635;product=YacC family pilotin-like protein;protein_id=WP_233479176.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3896486 3897343 . + . ID=gene-LU604_RS20640;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=LU604_RS20640;old_locus_tag=LU604_20640 NZ_CP089942.1 Protein Homology CDS 3896486 3897343 . + 0 ID=cds-WP_233479177.1;Parent=gene-LU604_RS20640;Dbxref=Genbank:WP_233479177.1;Name=WP_233479177.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012667175.1;locus_tag=LU604_RS20640;product=polyamine aminopropyltransferase;protein_id=WP_233479177.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3897370 3898179 . + . ID=gene-LU604_RS20645;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=LU604_RS20645;old_locus_tag=LU604_20645 NZ_CP089942.1 Protein Homology CDS 3897370 3898179 . + 0 ID=cds-WP_233479178.1;Parent=gene-LU604_RS20645;Dbxref=Genbank:WP_233479178.1;Name=WP_233479178.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190376.1;locus_tag=LU604_RS20645;product=adenosylmethionine decarboxylase;protein_id=WP_233479178.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3898100 3898936 . - . ID=gene-LU604_RS20650;Name=LU604_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20650;old_locus_tag=LU604_20650 NZ_CP089942.1 Protein Homology CDS 3898100 3898936 . - 0 ID=cds-WP_233479179.1;Parent=gene-LU604_RS20650;Dbxref=Genbank:WP_233479179.1;Name=WP_233479179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190377.1;locus_tag=LU604_RS20650;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_233479179.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3898914 3899183 . - . ID=gene-LU604_RS20655;Name=LU604_RS20655;end_range=3899183,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20655;old_locus_tag=LU604_20655;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3898914 3899183 . - 0 ID=cds-LU604_RS20655;Parent=gene-LU604_RS20655;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0051287;end_range=3899183,.;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226860.1;locus_tag=LU604_RS20655;partial=true;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3899146 3899319 . - . ID=gene-LU604_RS20660;Name=LU604_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20660;old_locus_tag=LU604_20660 NZ_CP089942.1 Protein Homology CDS 3899146 3899319 . - 0 ID=cds-WP_232426845.1;Parent=gene-LU604_RS20660;Dbxref=Genbank:WP_232426845.1;Name=WP_232426845.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018682.2;locus_tag=LU604_RS20660;product=four-carbon acid sugar kinase family protein;protein_id=WP_232426845.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3899249 3899539 . - . ID=gene-LU604_RS20665;Name=LU604_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20665;old_locus_tag=LU604_20665 NZ_CP089942.1 Protein Homology CDS 3899249 3899539 . - 0 ID=cds-WP_040465432.1;Parent=gene-LU604_RS20665;Dbxref=Genbank:WP_040465432.1;Name=WP_040465432.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018682.2;locus_tag=LU604_RS20665;product=hypothetical protein;protein_id=WP_040465432.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3899743 3900135 . + . ID=gene-LU604_RS20670;Name=LU604_RS20670;end_range=3900135,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20670;old_locus_tag=LU604_20670;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3899743 3900135 . + 0 ID=cds-LU604_RS20670;Parent=gene-LU604_RS20670;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016491,GO:0046872;end_range=3900135,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014701358.1;locus_tag=LU604_RS20670;partial=true;product=iron-containing alcohol dehydrogenase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3900180 3900654 . + . ID=gene-LU604_RS20675;Name=LU604_RS20675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20675;old_locus_tag=LU604_20675;pseudo=true NZ_CP089942.1 Protein Homology CDS 3900180 3900654 . + 0 ID=cds-LU604_RS20675;Parent=gene-LU604_RS20675;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768406.1;locus_tag=LU604_RS20675;product=YhcH/YjgK/YiaL family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3900651 3901308 . + . ID=gene-LU604_RS20680;Name=LU604_RS20680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20680;old_locus_tag=LU604_20680;pseudo=true NZ_CP089942.1 Protein Homology CDS 3900651 3901308 . + 0 ID=cds-LU604_RS20680;Parent=gene-LU604_RS20680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800420.1;locus_tag=LU604_RS20680;product=SDR family NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3901540 3902043 . - . ID=gene-LU604_RS20685;Name=LU604_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20685;old_locus_tag=LU604_20685 NZ_CP089942.1 Protein Homology CDS 3901540 3902043 . - 0 ID=cds-WP_233479180.1;Parent=gene-LU604_RS20685;Dbxref=Genbank:WP_233479180.1;Name=WP_233479180.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU604_RS20685;product=IS1 family transposase;protein_id=WP_233479180.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3901962 3902237 . - . ID=gene-LU604_RS20690;Name=LU604_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20690;old_locus_tag=LU604_20690 NZ_CP089942.1 Protein Homology CDS 3901962 3902237 . - 0 ID=cds-WP_072052792.1-2;Parent=gene-LU604_RS20690;Dbxref=Genbank:WP_072052792.1;Name=WP_072052792.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU604_RS20690;product=IS1-like element transposase;protein_id=WP_072052792.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3902691 3903143 . + . ID=gene-LU604_RS20695;Name=LU604_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20695;old_locus_tag=LU604_20695 NZ_CP089942.1 GeneMarkS-2+ CDS 3902691 3903143 . + 0 ID=cds-WP_233479181.1;Parent=gene-LU604_RS20695;Dbxref=Genbank:WP_233479181.1;Name=WP_233479181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS20695;product=hypothetical protein;protein_id=WP_233479181.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3903744 3906341 . - . ID=gene-LU604_RS20700;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=LU604_RS20700;old_locus_tag=LU604_20700 NZ_CP089942.1 Protein Homology CDS 3903744 3906341 . - 0 ID=cds-WP_233479182.1;Parent=gene-LU604_RS20700;Dbxref=Genbank:WP_233479182.1;Name=WP_233479182.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=LU604_RS20700;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_233479182.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3906628 3907309 . - . ID=gene-LU604_RS20705;Name=LU604_RS20705;end_range=3907309,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20705;old_locus_tag=LU604_20705;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3906628 3907309 . - 0 ID=cds-LU604_RS20705;Parent=gene-LU604_RS20705;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3907309,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343760.1;locus_tag=LU604_RS20705;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3907346 3907525 . - . ID=gene-LU604_RS20710;Name=LU604_RS20710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20710;old_locus_tag=LU604_20710;partial=true;pseudo=true;start_range=.,3907346 NZ_CP089942.1 Protein Homology CDS 3907346 3907525 . - 0 ID=cds-LU604_RS20710;Parent=gene-LU604_RS20710;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013544.2;locus_tag=LU604_RS20710;partial=true;product=transposase;pseudo=true;start_range=.,3907346;transl_table=11 NZ_CP089942.1 RefSeq gene 3907584 3908087 . - . ID=gene-LU604_RS20715;Name=LU604_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20715;old_locus_tag=LU604_20715 NZ_CP089942.1 Protein Homology CDS 3907584 3908087 . - 0 ID=cds-WP_233479183.1;Parent=gene-LU604_RS20715;Dbxref=Genbank:WP_233479183.1;Name=WP_233479183.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU604_RS20715;product=IS1 family transposase;protein_id=WP_233479183.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3908006 3908281 . - . ID=gene-LU604_RS20720;Name=LU604_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20720;old_locus_tag=LU604_20720 NZ_CP089942.1 Protein Homology CDS 3908006 3908281 . - 0 ID=cds-WP_233479184.1;Parent=gene-LU604_RS20720;Dbxref=Genbank:WP_233479184.1;Name=WP_233479184.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU604_RS20720;product=IS1-like element transposase;protein_id=WP_233479184.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3908331 3908888 . - . ID=gene-LU604_RS20725;Name=LU604_RS20725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20725;old_locus_tag=LU604_20725;partial=true;pseudo=true;start_range=.,3908331 NZ_CP089942.1 Protein Homology CDS 3908331 3908888 . - 0 ID=cds-LU604_RS20725;Parent=gene-LU604_RS20725;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=LU604_RS20725;partial=true;product=transposase;pseudo=true;start_range=.,3908331;transl_table=11 NZ_CP089942.1 RefSeq gene 3908911 3909327 . + . ID=gene-LU604_RS20730;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS20730;old_locus_tag=LU604_20730 NZ_CP089942.1 Protein Homology CDS 3908911 3909327 . + 0 ID=cds-WP_233479185.1;Parent=gene-LU604_RS20730;Dbxref=Genbank:WP_233479185.1;Name=WP_233479185.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192838.1;locus_tag=LU604_RS20730;product=IS200/IS605 family transposase;protein_id=WP_233479185.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3909514 3910656 . - . ID=gene-LU604_RS20735;Name=LU604_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20735;old_locus_tag=LU604_20735 NZ_CP089942.1 Protein Homology CDS 3909514 3910656 . - 0 ID=cds-WP_233479186.1;Parent=gene-LU604_RS20735;Dbxref=Genbank:WP_233479186.1;Name=WP_233479186.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037672.2;locus_tag=LU604_RS20735;product=T3SS effector HopA1 family protein;protein_id=WP_233479186.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3910667 3911056 . - . ID=gene-LU604_RS20740;Name=LU604_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20740;old_locus_tag=LU604_20740 NZ_CP089942.1 Protein Homology CDS 3910667 3911056 . - 0 ID=cds-WP_233479187.1;Parent=gene-LU604_RS20740;Dbxref=Genbank:WP_233479187.1;Name=WP_233479187.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017719.2;locus_tag=LU604_RS20740;product=type III secretion system chaperone;protein_id=WP_233479187.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3911810 3911941 . + . ID=gene-LU604_RS20745;Name=LU604_RS20745;end_range=3911941,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20745;old_locus_tag=LU604_20745;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3911810 3911941 . + 0 ID=cds-LU604_RS20745;Parent=gene-LU604_RS20745;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;end_range=3911941,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000905001.1;locus_tag=LU604_RS20745;partial=true;product=recombinase family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3911937 3912044 . + . ID=gene-LU604_RS20750;Name=LU604_RS20750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20750;old_locus_tag=LU604_20750;partial=true;pseudo=true;start_range=.,3911937 NZ_CP089942.1 Protein Homology CDS 3911937 3912044 . + 0 ID=cds-LU604_RS20750;Parent=gene-LU604_RS20750;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004158064.1;locus_tag=LU604_RS20750;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,3911937;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3912158 3912342 . + . ID=gene-LU604_RS20755;Name=LU604_RS20755;end_range=3912342,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20755;old_locus_tag=LU604_20755;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 3912158 3912342 . + 0 ID=cds-LU604_RS20755;Parent=gene-LU604_RS20755;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3912342,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011787828.1;locus_tag=LU604_RS20755;partial=true;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3913390 3914169 . - . ID=gene-LU604_RS20760;Name=LU604_RS20760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20760;old_locus_tag=LU604_20760;pseudo=true NZ_CP089942.1 Protein Homology CDS 3913390 3914169 . - 0 ID=cds-LU604_RS20760;Parent=gene-LU604_RS20760;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS20760;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3915059 3916221 . - . ID=gene-LU604_RS20765;Name=LU604_RS20765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20765;old_locus_tag=LU604_20765;pseudo=true NZ_CP089942.1 Protein Homology CDS 3915059 3916221 . - 0 ID=cds-LU604_RS20765;Parent=gene-LU604_RS20765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000942659.1;locus_tag=LU604_RS20765;product=RNA-guided endonuclease TnpB family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3916340 3916705 . + . ID=gene-LU604_RS20770;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS20770;old_locus_tag=LU604_20770 NZ_CP089942.1 Protein Homology CDS 3916340 3916705 . + 0 ID=cds-WP_087949680.1;Parent=gene-LU604_RS20770;Dbxref=Genbank:WP_087949680.1;Name=WP_087949680.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041205574.1;locus_tag=LU604_RS20770;product=IS200/IS605 family transposase;protein_id=WP_087949680.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3918445 3918852 . + . ID=gene-LU604_RS20775;Name=LU604_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20775;old_locus_tag=LU604_20775 NZ_CP089942.1 GeneMarkS-2+ CDS 3918445 3918852 . + 0 ID=cds-WP_016190393.1;Parent=gene-LU604_RS20775;Dbxref=Genbank:WP_016190393.1;Name=WP_016190393.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS20775;product=hypothetical protein;protein_id=WP_016190393.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3918953 3919489 . + . ID=gene-LU604_RS20780;Name=LU604_RS20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20780;old_locus_tag=LU604_20780 NZ_CP089942.1 Protein Homology CDS 3918953 3919489 . + 0 ID=cds-WP_233479188.1;Parent=gene-LU604_RS20780;Dbxref=Genbank:WP_233479188.1;Name=WP_233479188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007667843.1;locus_tag=LU604_RS20780;product=fimbrial protein;protein_id=WP_233479188.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3919565 3920263 . + . ID=gene-LU604_RS20785;Name=LU604_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20785;old_locus_tag=LU604_20785 NZ_CP089942.1 Protein Homology CDS 3919565 3920263 . + 0 ID=cds-WP_233479189.1;Parent=gene-LU604_RS20785;Dbxref=Genbank:WP_233479189.1;Name=WP_233479189.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190395.1;locus_tag=LU604_RS20785;product=fimbria/pilus periplasmic chaperone;protein_id=WP_233479189.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3920320 3922896 . + . ID=gene-LU604_RS20790;Name=LU604_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20790;old_locus_tag=LU604_20790 NZ_CP089942.1 Protein Homology CDS 3920320 3922896 . + 0 ID=cds-WP_233479190.1;Parent=gene-LU604_RS20790;Dbxref=Genbank:WP_233479190.1;Name=WP_233479190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190396.1;locus_tag=LU604_RS20790;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_233479190.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3922936 3924048 . + . ID=gene-LU604_RS20795;Name=LU604_RS20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20795;old_locus_tag=LU604_20795 NZ_CP089942.1 Protein Homology CDS 3922936 3924048 . + 0 ID=cds-WP_233479191.1;Parent=gene-LU604_RS20795;Dbxref=Genbank:WP_233479191.1;Name=WP_233479191.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012635.2;locus_tag=LU604_RS20795;product=fimbrial protein;protein_id=WP_233479191.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3924246 3924749 . + . ID=gene-LU604_RS20800;Name=LU604_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20800;old_locus_tag=LU604_20800 NZ_CP089942.1 Protein Homology CDS 3924246 3924749 . + 0 ID=cds-WP_233479192.1;Parent=gene-LU604_RS20800;Dbxref=Genbank:WP_233479192.1;Name=WP_233479192.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012422.2;locus_tag=LU604_RS20800;product=helix-turn-helix transcriptional regulator;protein_id=WP_233479192.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3924723 3925049 . - . ID=gene-LU604_RS20805;Name=LU604_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20805;old_locus_tag=LU604_20805 NZ_CP089942.1 GeneMarkS-2+ CDS 3924723 3925049 . - 0 ID=cds-WP_233481391.1;Parent=gene-LU604_RS20805;Dbxref=Genbank:WP_233481391.1;Name=WP_233481391.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS20805;product=hypothetical protein;protein_id=WP_233481391.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3925126 3925470 . - . ID=gene-LU604_RS20810;Name=LU604_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20810;old_locus_tag=LU604_20810 NZ_CP089942.1 GeneMarkS-2+ CDS 3925126 3925470 . - 0 ID=cds-WP_051124338.1;Parent=gene-LU604_RS20810;Dbxref=Genbank:WP_051124338.1;Name=WP_051124338.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS20810;product=hypothetical protein;protein_id=WP_051124338.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3925463 3925729 . - . ID=gene-LU604_RS20815;Name=LU604_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20815;old_locus_tag=LU604_20815 NZ_CP089942.1 GeneMarkS-2+ CDS 3925463 3925729 . - 0 ID=cds-WP_016190399.1;Parent=gene-LU604_RS20815;Dbxref=Genbank:WP_016190399.1;Name=WP_016190399.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS20815;product=lactoylglutathione lyase family protein;protein_id=WP_016190399.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3925777 3926486 . - . ID=gene-LU604_RS20820;Name=LU604_RS20820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20820;old_locus_tag=LU604_20820;pseudo=true NZ_CP089942.1 Protein Homology CDS 3925777 3926486 . - 0 ID=cds-LU604_RS20820;Parent=gene-LU604_RS20820;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU604_RS20820;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3926760 3928655 . + . ID=gene-LU604_RS20825;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=LU604_RS20825;old_locus_tag=LU604_20825 NZ_CP089942.1 Protein Homology CDS 3926760 3928655 . + 0 ID=cds-WP_233479195.1;Parent=gene-LU604_RS20825;Dbxref=Genbank:WP_233479195.1;Name=WP_233479195.1;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190402.1;locus_tag=LU604_RS20825;product=penicillin-binding protein 2;protein_id=WP_233479195.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3928690 3929469 . - . ID=gene-LU604_RS20830;Name=LU604_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20830;old_locus_tag=LU604_20830 NZ_CP089942.1 Protein Homology CDS 3928690 3929469 . - 0 ID=cds-WP_016190403.1;Parent=gene-LU604_RS20830;Dbxref=Genbank:WP_016190403.1;Name=WP_016190403.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203776.1;locus_tag=LU604_RS20830;product=heme ABC transporter ATP-binding protein;protein_id=WP_016190403.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3929466 3930464 . - . ID=gene-LU604_RS20835;Name=LU604_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20835;old_locus_tag=LU604_20835 NZ_CP089942.1 Protein Homology CDS 3929466 3930464 . - 0 ID=cds-WP_233479196.1;Parent=gene-LU604_RS20835;Dbxref=Genbank:WP_233479196.1;Name=WP_233479196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190404.1;locus_tag=LU604_RS20835;product=iron ABC transporter permease;protein_id=WP_233479196.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3930461 3931279 . - . ID=gene-LU604_RS20840;Name=LU604_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20840;old_locus_tag=LU604_20840 NZ_CP089942.1 Protein Homology CDS 3930461 3931279 . - 0 ID=cds-WP_016190405.1;Parent=gene-LU604_RS20840;Dbxref=Genbank:WP_016190405.1;Name=WP_016190405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203778.1;locus_tag=LU604_RS20840;product=hemin ABC transporter substrate-binding protein;protein_id=WP_016190405.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3931276 3932307 . - . ID=gene-LU604_RS20845;Name=LU604_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20845;old_locus_tag=LU604_20845 NZ_CP089942.1 Protein Homology CDS 3931276 3932307 . - 0 ID=cds-WP_233479197.1;Parent=gene-LU604_RS20845;Dbxref=Genbank:WP_233479197.1;Name=WP_233479197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802153.1;locus_tag=LU604_RS20845;product=hemin-degrading factor;protein_id=WP_233479197.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3932380 3934773 . - . ID=gene-LU604_RS20850;Name=LU604_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20850;old_locus_tag=LU604_20850 NZ_CP089942.1 Protein Homology CDS 3932380 3934773 . - 0 ID=cds-WP_233479198.1;Parent=gene-LU604_RS20850;Dbxref=Genbank:WP_233479198.1;Name=WP_233479198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190407.1;locus_tag=LU604_RS20850;product=TonB-dependent receptor;protein_id=WP_233479198.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3935031 3935311 . + . ID=gene-LU604_RS20855;Name=LU604_RS20855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20855;old_locus_tag=LU604_20855;pseudo=true NZ_CP089942.1 Protein Homology CDS 3935031 3935311 . + 0 ID=cds-LU604_RS20855;Parent=gene-LU604_RS20855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004571230.1;locus_tag=LU604_RS20855;product=SelT/SelW/SelH family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3935344 3935478 . + . ID=gene-LU604_RS27055;Name=LU604_RS27055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27055 NZ_CP089942.1 GeneMarkS-2+ CDS 3935344 3935478 . + 0 ID=cds-WP_256371743.1;Parent=gene-LU604_RS27055;Dbxref=Genbank:WP_256371743.1;Name=WP_256371743.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS27055;product=hypothetical protein;protein_id=WP_256371743.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3935475 3935882 . + . ID=gene-LU604_RS20860;Name=LU604_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20860;old_locus_tag=LU604_20860 NZ_CP089942.1 Protein Homology CDS 3935475 3935882 . + 0 ID=cds-WP_016190409.1;Parent=gene-LU604_RS20860;Dbxref=Genbank:WP_016190409.1;Name=WP_016190409.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012955.2;locus_tag=LU604_RS20860;product=MBL fold metallo-hydrolase;protein_id=WP_016190409.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3935875 3936216 . + . ID=gene-LU604_RS20865;Name=LU604_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20865;old_locus_tag=LU604_20865 NZ_CP089942.1 GeneMarkS-2+ CDS 3935875 3936216 . + 0 ID=cds-WP_016190410.1;Parent=gene-LU604_RS20865;Dbxref=Genbank:WP_016190410.1;Name=WP_016190410.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS20865;product=hypothetical protein;protein_id=WP_016190410.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3936412 3938097 . + . ID=gene-LU604_RS20870;Name=LU604_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20870;old_locus_tag=LU604_20870 NZ_CP089942.1 Protein Homology CDS 3936412 3938097 . + 0 ID=cds-WP_233480857.1;Parent=gene-LU604_RS20870;Dbxref=Genbank:WP_233480857.1;Name=WP_233480857.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190411.1;locus_tag=LU604_RS20870;product=methyl-accepting chemotaxis protein;protein_id=WP_233480857.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3938098 3938229 . + . ID=gene-LU604_RS27060;Name=LU604_RS27060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27060 NZ_CP089942.1 GeneMarkS-2+ CDS 3938098 3938229 . + 0 ID=cds-WP_256371742.1;Parent=gene-LU604_RS27060;Dbxref=Genbank:WP_256371742.1;Name=WP_256371742.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS27060;product=hypothetical protein;protein_id=WP_256371742.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3938230 3938532 . + . ID=gene-LU604_RS20875;Name=LU604_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20875;old_locus_tag=LU604_20875 NZ_CP089942.1 GeneMarkS-2+ CDS 3938230 3938532 . + 0 ID=cds-WP_016190412.1;Parent=gene-LU604_RS20875;Dbxref=Genbank:WP_016190412.1;Name=WP_016190412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS20875;product=hypothetical protein;protein_id=WP_016190412.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3939016 3939525 . + . ID=gene-LU604_RS20880;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=LU604_RS20880;old_locus_tag=LU604_20880 NZ_CP089942.1 Protein Homology CDS 3939016 3939525 . + 0 ID=cds-WP_016190413.1;Parent=gene-LU604_RS20880;Dbxref=Genbank:WP_016190413.1;Name=WP_016190413.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=cellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203806.1;locus_tag=LU604_RS20880;product=non-heme ferritin;protein_id=WP_016190413.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3940037 3940267 . - . ID=gene-LU604_RS20885;Name=LU604_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20885;old_locus_tag=LU604_20885 NZ_CP089942.1 Protein Homology CDS 3940037 3940267 . - 0 ID=cds-WP_016190414.1;Parent=gene-LU604_RS20885;Dbxref=Genbank:WP_016190414.1;Name=WP_016190414.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025054.2;locus_tag=LU604_RS20885;product=GNAT family N-acetyltransferase;protein_id=WP_016190414.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3940415 3940627 . - . ID=gene-LU604_RS20890;Name=LU604_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20890;old_locus_tag=LU604_20890 NZ_CP089942.1 GeneMarkS-2+ CDS 3940415 3940627 . - 0 ID=cds-WP_232426832.1;Parent=gene-LU604_RS20890;Dbxref=Genbank:WP_232426832.1;Name=WP_232426832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS20890;product=hypothetical protein;protein_id=WP_232426832.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3940803 3942080 . - . ID=gene-LU604_RS20895;Name=LU604_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20895;old_locus_tag=LU604_20895 NZ_CP089942.1 Protein Homology CDS 3940803 3942080 . - 0 ID=cds-WP_233479199.1;Parent=gene-LU604_RS20895;Dbxref=Genbank:WP_233479199.1;Name=WP_233479199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190416.1;locus_tag=LU604_RS20895;product=phosphatase PAP2 family protein;protein_id=WP_233479199.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3942531 3942698 . + . ID=gene-LU604_RS20900;Name=LU604_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20900;old_locus_tag=LU604_20900 NZ_CP089942.1 GeneMarkS-2+ CDS 3942531 3942698 . + 0 ID=cds-WP_157275218.1;Parent=gene-LU604_RS20900;Dbxref=Genbank:WP_157275218.1;Name=WP_157275218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS20900;product=hypothetical protein;protein_id=WP_157275218.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3942948 3943106 . - . ID=gene-LU604_RS20905;Name=LU604_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20905;old_locus_tag=LU604_20905 NZ_CP089942.1 GeneMarkS-2+ CDS 3942948 3943106 . - 0 ID=cds-WP_157275219.1;Parent=gene-LU604_RS20905;Dbxref=Genbank:WP_157275219.1;Name=WP_157275219.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS20905;product=hypothetical protein;protein_id=WP_157275219.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3943109 3943201 . - . ID=gene-LU604_RS20910;Name=LU604_RS20910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20910;old_locus_tag=LU604_20910;partial=true;pseudo=true;start_range=.,3943109 NZ_CP089942.1 Protein Homology CDS 3943109 3943201 . - 0 ID=cds-LU604_RS20910;Parent=gene-LU604_RS20910;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012228774.1;locus_tag=LU604_RS20910;partial=true;product=DNA-binding protein;pseudo=true;start_range=.,3943109;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3943283 3944082 . + . ID=gene-LU604_RS20915;Name=LU604_RS20915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20915;old_locus_tag=LU604_20915;pseudo=true NZ_CP089942.1 Protein Homology CDS 3943283 3944082 . + 0 ID=cds-LU604_RS20915;Parent=gene-LU604_RS20915;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS20915;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3944121 3945193 . + . ID=gene-LU604_RS20920;Name=LU604_RS20920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20920;old_locus_tag=LU604_20920;pseudo=true NZ_CP089942.1 Protein Homology CDS 3944121 3945193 . + 0 ID=cds-LU604_RS20920;Parent=gene-LU604_RS20920;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011073373.1;locus_tag=LU604_RS20920;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3945879 3947564 . + . ID=gene-LU604_RS20925;Name=LU604_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20925;old_locus_tag=LU604_20925 NZ_CP089942.1 Protein Homology CDS 3945879 3947564 . + 0 ID=cds-WP_016190417.1;Parent=gene-LU604_RS20925;Dbxref=Genbank:WP_016190417.1;Name=WP_016190417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371204.1;locus_tag=LU604_RS20925;product=sensor histidine kinase;protein_id=WP_016190417.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3947558 3948286 . + . ID=gene-LU604_RS20930;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=LU604_RS20930;old_locus_tag=LU604_20930 NZ_CP089942.1 Protein Homology CDS 3947558 3948286 . + 0 ID=cds-WP_233479200.1;Parent=gene-LU604_RS20930;Dbxref=Genbank:WP_233479200.1;Name=WP_233479200.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007675968.1;locus_tag=LU604_RS20930;product=two-component system response regulator BtsR;protein_id=WP_233479200.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3948409 3948612 . - . ID=gene-LU604_RS20935;Name=LU604_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20935;old_locus_tag=LU604_20935 NZ_CP089942.1 Protein Homology CDS 3948409 3948612 . - 0 ID=cds-WP_233479201.1;Parent=gene-LU604_RS20935;Dbxref=Genbank:WP_233479201.1;Name=WP_233479201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817000.1;locus_tag=LU604_RS20935;product=YbdD/YjiX family protein;protein_id=WP_233479201.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3948659 3950812 . - . ID=gene-LU604_RS20940;Name=LU604_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20940;old_locus_tag=LU604_20940 NZ_CP089942.1 Protein Homology CDS 3948659 3950812 . - 0 ID=cds-WP_233479202.1;Parent=gene-LU604_RS20940;Dbxref=Genbank:WP_233479202.1;Name=WP_233479202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=LU604_RS20940;product=carbon starvation protein A;protein_id=WP_233479202.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3951550 3952255 . - . ID=gene-LU604_RS20945;Name=LU604_RS20945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20945;old_locus_tag=LU604_20945;partial=true;pseudo=true;start_range=.,3951550 NZ_CP089942.1 Protein Homology CDS 3951550 3952255 . - 0 ID=cds-LU604_RS20945;Parent=gene-LU604_RS20945;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008103318.1;locus_tag=LU604_RS20945;partial=true;product=alpha-E domain-containing protein;pseudo=true;start_range=.,3951550;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3952249 3953658 . - . ID=gene-LU604_RS20950;Name=LU604_RS20950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS20950;old_locus_tag=LU604_20950;pseudo=true NZ_CP089942.1 Protein Homology CDS 3952249 3953658 . - 0 ID=cds-LU604_RS20950;Parent=gene-LU604_RS20950;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203827.1;locus_tag=LU604_RS20950;product=circularly permuted type 2 ATP-grasp protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3953840 3954418 . - . ID=gene-LU604_RS20955;Name=LU604_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20955;old_locus_tag=LU604_20955 NZ_CP089942.1 Protein Homology CDS 3953840 3954418 . - 0 ID=cds-WP_233479203.1;Parent=gene-LU604_RS20955;Dbxref=Genbank:WP_233479203.1;Name=WP_233479203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190422.1;locus_tag=LU604_RS20955;product=hypothetical protein;protein_id=WP_233479203.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3954631 3955017 . - . ID=gene-LU604_RS20960;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS20960;old_locus_tag=LU604_20960 NZ_CP089942.1 Protein Homology CDS 3954631 3955017 . - 0 ID=cds-WP_233480858.1;Parent=gene-LU604_RS20960;Dbxref=Genbank:WP_233480858.1;Name=WP_233480858.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011758714.1;locus_tag=LU604_RS20960;product=IS200/IS605 family transposase;protein_id=WP_233480858.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3955343 3956041 . - . ID=gene-LU604_RS20965;Name=LU604_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20965;old_locus_tag=LU604_20965 NZ_CP089942.1 Protein Homology CDS 3955343 3956041 . - 0 ID=cds-WP_016190424.1;Parent=gene-LU604_RS20965;Dbxref=Genbank:WP_016190424.1;Name=WP_016190424.1;Ontology_term=GO:0006352,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389990.1;locus_tag=LU604_RS20965;product=FliA/WhiG family RNA polymerase sigma factor;protein_id=WP_016190424.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3956041 3956508 . - . ID=gene-LU604_RS20970;Name=LU604_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20970;old_locus_tag=LU604_20970 NZ_CP089942.1 GeneMarkS-2+ CDS 3956041 3956508 . - 0 ID=cds-WP_233479204.1;Parent=gene-LU604_RS20970;Dbxref=Genbank:WP_233479204.1;Name=WP_233479204.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS20970;product=hypothetical protein;protein_id=WP_233479204.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3957352 3958383 . + . ID=gene-LU604_RS20975;Name=LU604_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20975;old_locus_tag=LU604_20975 NZ_CP089942.1 Protein Homology CDS 3957352 3958383 . + 0 ID=cds-WP_016190426.1;Parent=gene-LU604_RS20975;Dbxref=Genbank:WP_016190426.1;Name=WP_016190426.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012698.2;locus_tag=LU604_RS20975;product=transcriptional regulator;protein_id=WP_016190426.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3958328 3958759 . + . ID=gene-LU604_RS20980;Name=LU604_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20980;old_locus_tag=LU604_20980 NZ_CP089942.1 GeneMarkS-2+ CDS 3958328 3958759 . + 0 ID=cds-WP_233479205.1;Parent=gene-LU604_RS20980;Dbxref=Genbank:WP_233479205.1;Name=WP_233479205.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS20980;product=hypothetical protein;protein_id=WP_233479205.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3958817 3959152 . + . ID=gene-LU604_RS20985;Name=LU604_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20985;old_locus_tag=LU604_20985 NZ_CP089942.1 GeneMarkS-2+ CDS 3958817 3959152 . + 0 ID=cds-WP_016190428.1;Parent=gene-LU604_RS20985;Dbxref=Genbank:WP_016190428.1;Name=WP_016190428.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS20985;product=hypothetical protein;protein_id=WP_016190428.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3959482 3960513 . - . ID=gene-LU604_RS20990;Name=LU604_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS20990;old_locus_tag=LU604_20990 NZ_CP089942.1 Protein Homology CDS 3959482 3960513 . - 0 ID=cds-WP_233481392.1;Parent=gene-LU604_RS20990;Dbxref=Genbank:WP_233481392.1;Name=WP_233481392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716636.1;locus_tag=LU604_RS20990;product=sigma-54 dependent transcriptional regulator;protein_id=WP_233481392.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3961226 3962413 . - . ID=gene-LU604_RS27065;Name=LU604_RS27065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS27065;pseudo=true NZ_CP089942.1 Protein Homology CDS 3961226 3962413 . - 0 ID=cds-LU604_RS27065;Parent=gene-LU604_RS27065;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS27065;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3963299 3964288 . - . ID=gene-LU604_RS21005;Name=LU604_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21005;old_locus_tag=LU604_21005 NZ_CP089942.1 GeneMarkS-2+ CDS 3963299 3964288 . - 0 ID=cds-WP_016190430.1;Parent=gene-LU604_RS21005;Dbxref=Genbank:WP_016190430.1;Name=WP_016190430.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS21005;product=hypothetical protein;protein_id=WP_016190430.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3964496 3964987 . + . ID=gene-LU604_RS21010;Name=LU604_RS21010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21010;old_locus_tag=LU604_21010;pseudo=true NZ_CP089942.1 Protein Homology CDS 3964496 3964987 . + 0 ID=cds-LU604_RS21010;Parent=gene-LU604_RS21010;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022234.2;locus_tag=LU604_RS21010;product=YlaC family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3964888 3966092 . - . ID=gene-LU604_RS21015;Name=LU604_RS21015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21015;old_locus_tag=LU604_21015;pseudo=true NZ_CP089942.1 Protein Homology CDS 3964888 3966092 . - 0 ID=cds-LU604_RS21015;Parent=gene-LU604_RS21015;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001688623.1;locus_tag=LU604_RS21015;product=PLP-dependent aminotransferase family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3966152 3966721 . - . ID=gene-LU604_RS21020;Name=LU604_RS21020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21020;old_locus_tag=LU604_21020;partial=true;pseudo=true;start_range=.,3966152 NZ_CP089942.1 Protein Homology CDS 3966152 3966721 . - 0 ID=cds-LU604_RS21020;Parent=gene-LU604_RS21020;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018760.1;locus_tag=LU604_RS21020;partial=true;product=SDR family NAD(P)-dependent oxidoreductase;pseudo=true;start_range=.,3966152;transl_table=11 NZ_CP089942.1 RefSeq gene 3967031 3968344 . + . ID=gene-LU604_RS21025;Name=LU604_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21025;old_locus_tag=LU604_21025 NZ_CP089942.1 Protein Homology CDS 3967031 3968344 . + 0 ID=cds-WP_233479206.1;Parent=gene-LU604_RS21025;Dbxref=Genbank:WP_233479206.1;Name=WP_233479206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190434.1;locus_tag=LU604_RS21025;product=MFS transporter;protein_id=WP_233479206.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3968608 3969030 . - . ID=gene-LU604_RS21030;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=LU604_RS21030;old_locus_tag=LU604_21030 NZ_CP089942.1 Protein Homology CDS 3968608 3969030 . - 0 ID=cds-WP_016190435.1;Parent=gene-LU604_RS21030;Dbxref=Genbank:WP_016190435.1;Name=WP_016190435.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009127738.1;locus_tag=LU604_RS21030;product=TonB system transport protein ExbD;protein_id=WP_016190435.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3969036 3969770 . - . ID=gene-LU604_RS21035;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=LU604_RS21035;old_locus_tag=LU604_21035 NZ_CP089942.1 Protein Homology CDS 3969036 3969770 . - 0 ID=cds-WP_233479207.1;Parent=gene-LU604_RS21035;Dbxref=Genbank:WP_233479207.1;Name=WP_233479207.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=LU604_RS21035;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_233479207.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3970004 3971203 . + . ID=gene-LU604_RS21040;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=LU604_RS21040;old_locus_tag=LU604_21040 NZ_CP089942.1 Protein Homology CDS 3970004 3971203 . + 0 ID=cds-WP_233479208.1;Parent=gene-LU604_RS21040;Dbxref=Genbank:WP_233479208.1;Name=WP_233479208.1;Ontology_term=GO:0006520,GO:0019346,GO:0004121,GO:0030170;gbkey=CDS;gene=metC;go_function=cystathionine beta-lyase activity|0004121||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190437.1;locus_tag=LU604_RS21040;product=cystathionine beta-lyase;protein_id=WP_233479208.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3971300 3971956 . + . ID=gene-LU604_RS21045;Name=LU604_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21045;old_locus_tag=LU604_21045 NZ_CP089942.1 Protein Homology CDS 3971300 3971956 . + 0 ID=cds-WP_233479209.1;Parent=gene-LU604_RS21045;Dbxref=Genbank:WP_233479209.1;Name=WP_233479209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190438.1;locus_tag=LU604_RS21045;product=DedA family protein;protein_id=WP_233479209.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3972299 3973447 . - . ID=gene-LU604_RS21050;Name=LU604_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21050;old_locus_tag=LU604_21050 NZ_CP089942.1 Protein Homology CDS 3972299 3973447 . - 0 ID=cds-WP_233479210.1;Parent=gene-LU604_RS21050;Dbxref=Genbank:WP_233479210.1;Name=WP_233479210.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025563.2;locus_tag=LU604_RS21050;product=RICIN domain-containing protein;protein_id=WP_233479210.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3973453 3973988 . - . ID=gene-LU604_RS21055;Name=LU604_RS21055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21055;old_locus_tag=LU604_21055;partial=true;pseudo=true;start_range=.,3973453 NZ_CP089942.1 Protein Homology CDS 3973453 3973988 . - 0 ID=cds-LU604_RS21055;Parent=gene-LU604_RS21055;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611197.1;locus_tag=LU604_RS21055;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,3973453;transl_table=11 NZ_CP089942.1 RefSeq gene 3974467 3974736 . + . ID=gene-LU604_RS21060;Name=LU604_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21060;old_locus_tag=LU604_21060 NZ_CP089942.1 Protein Homology CDS 3974467 3974736 . + 0 ID=cds-WP_016190443.1;Parent=gene-LU604_RS21060;Dbxref=Genbank:WP_016190443.1;Name=WP_016190443.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018986.2;locus_tag=LU604_RS21060;product=DUF1471 domain-containing protein;protein_id=WP_016190443.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3975116 3976531 . - . ID=gene-LU604_RS21065;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=LU604_RS21065;old_locus_tag=LU604_21065 NZ_CP089942.1 Protein Homology CDS 3975116 3976531 . - 0 ID=cds-WP_233479211.1;Parent=gene-LU604_RS21065;Dbxref=Genbank:WP_233479211.1;Name=WP_233479211.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190444.1;locus_tag=LU604_RS21065;product=cell division protein FtsP;protein_id=WP_233479211.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3976623 3977360 . - . ID=gene-LU604_RS21070;Name=LU604_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21070;old_locus_tag=LU604_21070 NZ_CP089942.1 Protein Homology CDS 3976623 3977360 . - 0 ID=cds-WP_233479212.1;Parent=gene-LU604_RS21070;Dbxref=Genbank:WP_233479212.1;Name=WP_233479212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190445.1;locus_tag=LU604_RS21070;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_233479212.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3977448 3979721 . - . ID=gene-LU604_RS21075;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=LU604_RS21075;old_locus_tag=LU604_21075 NZ_CP089942.1 Protein Homology CDS 3977448 3979721 . - 0 ID=cds-WP_233479213.1;Parent=gene-LU604_RS21075;Dbxref=Genbank:WP_233479213.1;Name=WP_233479213.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010249025.1;locus_tag=LU604_RS21075;product=DNA topoisomerase IV subunit A;protein_id=WP_233479213.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3979858 3980628 . - . ID=gene-LU604_RS21080;Name=LU604_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21080;old_locus_tag=LU604_21080 NZ_CP089942.1 Protein Homology CDS 3979858 3980628 . - 0 ID=cds-WP_233480859.1;Parent=gene-LU604_RS21080;Dbxref=Genbank:WP_233480859.1;Name=WP_233480859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019104842.1;locus_tag=LU604_RS21080;product=transporter substrate-binding domain-containing protein;protein_id=WP_233480859.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3981504 3981785 . + . ID=gene-LU604_RS21085;Name=LU604_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21085;old_locus_tag=LU604_21085 NZ_CP089942.1 Protein Homology CDS 3981504 3981785 . + 0 ID=cds-WP_233480860.1;Parent=gene-LU604_RS21085;Dbxref=Genbank:WP_233480860.1;Name=WP_233480860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666813.1;locus_tag=LU604_RS21085;product=antibiotic biosynthesis monooxygenase;protein_id=WP_233480860.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3981826 3982735 . + . ID=gene-LU604_RS21090;Name=LU604_RS21090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21090;old_locus_tag=LU604_21090;pseudo=true NZ_CP089942.1 Protein Homology CDS 3981826 3982735 . + 0 ID=cds-LU604_RS21090;Parent=gene-LU604_RS21090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443041.1;locus_tag=LU604_RS21090;product=nucleoside hydrolase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3982765 3983267 . - . ID=gene-LU604_RS21095;Name=LU604_RS21095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21095;old_locus_tag=LU604_21095;pseudo=true NZ_CP089942.1 Protein Homology CDS 3982765 3983267 . - 0 ID=cds-LU604_RS21095;Parent=gene-LU604_RS21095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378409.1;locus_tag=LU604_RS21095;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3983364 3983909 . + . ID=gene-LU604_RS21100;Name=LU604_RS21100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21100;old_locus_tag=LU604_21100;pseudo=true NZ_CP089942.1 Protein Homology CDS 3983364 3983909 . + 0 ID=cds-LU604_RS21100;Parent=gene-LU604_RS21100;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013317304.1;locus_tag=LU604_RS21100;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3984169 3986064 . - . ID=gene-LU604_RS21105;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=LU604_RS21105;old_locus_tag=LU604_21105 NZ_CP089942.1 Protein Homology CDS 3984169 3986064 . - 0 ID=cds-WP_233479214.1;Parent=gene-LU604_RS21105;Dbxref=Genbank:WP_233479214.1;Name=WP_233479214.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257886.1;locus_tag=LU604_RS21105;product=DNA topoisomerase IV subunit B;protein_id=WP_233479214.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3986118 3986699 . - . ID=gene-LU604_RS21110;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=LU604_RS21110;old_locus_tag=LU604_21110 NZ_CP089942.1 Protein Homology CDS 3986118 3986699 . - 0 ID=cds-WP_233479215.1;Parent=gene-LU604_RS21110;Dbxref=Genbank:WP_233479215.1;Name=WP_233479215.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190452.1;locus_tag=LU604_RS21110;product=esterase YqiA;protein_id=WP_233479215.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3986703 3987530 . - . ID=gene-LU604_RS21115;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=LU604_RS21115;old_locus_tag=LU604_21115 NZ_CP089942.1 Protein Homology CDS 3986703 3987530 . - 0 ID=cds-WP_016190453.1;Parent=gene-LU604_RS21115;Dbxref=Genbank:WP_016190453.1;Name=WP_016190453.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005180337.1;locus_tag=LU604_RS21115;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_016190453.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3987579 3987998 . - . ID=gene-LU604_RS21120;Name=LU604_RS21120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21120;old_locus_tag=LU604_21120;pseudo=true NZ_CP089942.1 Protein Homology CDS 3987579 3987998 . - 0 ID=cds-LU604_RS21120;Parent=gene-LU604_RS21120;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004948286.1;locus_tag=LU604_RS21120;product=DUF1249 family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3987995 3988630 . - . ID=gene-LU604_RS21125;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=LU604_RS21125;old_locus_tag=LU604_21125 NZ_CP089942.1 Protein Homology CDS 3987995 3988630 . - 0 ID=cds-WP_233479216.1;Parent=gene-LU604_RS21125;Dbxref=Genbank:WP_233479216.1;Name=WP_233479216.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440190.1;locus_tag=LU604_RS21125;product=ADP-ribose diphosphatase;protein_id=WP_233479216.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3988848 3990314 . + . ID=gene-LU604_RS21130;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=LU604_RS21130;old_locus_tag=LU604_21130 NZ_CP089942.1 Protein Homology CDS 3988848 3990314 . + 0 ID=cds-WP_016190457.1;Parent=gene-LU604_RS21130;Dbxref=Genbank:WP_016190457.1;Name=WP_016190457.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155227.1;locus_tag=LU604_RS21130;product=outer membrane channel protein TolC;protein_id=WP_016190457.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3990457 3991113 . + . ID=gene-LU604_RS21135;Name=LU604_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21135;old_locus_tag=LU604_21135 NZ_CP089942.1 Protein Homology CDS 3990457 3991113 . + 0 ID=cds-WP_233479218.1;Parent=gene-LU604_RS21135;Dbxref=Genbank:WP_233479218.1;Name=WP_233479218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155226.1;locus_tag=LU604_RS21135;product=DUF1190 family protein;protein_id=WP_233479218.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3991120 3992280 . + . ID=gene-LU604_RS21140;Name=LU604_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21140;old_locus_tag=LU604_21140 NZ_CP089942.1 Protein Homology CDS 3991120 3992280 . + 0 ID=cds-WP_016190459.1;Parent=gene-LU604_RS21140;Dbxref=Genbank:WP_016190459.1;Name=WP_016190459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359058.1;locus_tag=LU604_RS21140;product=glutathionylspermidine synthase family protein;protein_id=WP_016190459.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3992316 3993101 . - . ID=gene-LU604_RS21145;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=LU604_RS21145;old_locus_tag=LU604_21145 NZ_CP089942.1 Protein Homology CDS 3992316 3993101 . - 0 ID=cds-WP_233479219.1;Parent=gene-LU604_RS21145;Dbxref=Genbank:WP_233479219.1;Name=WP_233479219.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=LU604_RS21145;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_233479219.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 3993606 3994739 . - . ID=gene-LU604_RS21150;Name=LU604_RS21150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21150;old_locus_tag=LU604_21150;pseudo=true NZ_CP089942.1 Protein Homology CDS 3993606 3994739 . - 0 ID=cds-LU604_RS21150;Parent=gene-LU604_RS21150;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS21150;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 3995403 3996059 . - . ID=gene-LU604_RS21155;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=LU604_RS21155;old_locus_tag=LU604_21155 NZ_CP089942.1 Protein Homology CDS 3995403 3996059 . - 0 ID=cds-WP_016190462.1;Parent=gene-LU604_RS21155;Dbxref=Genbank:WP_016190462.1;Name=WP_016190462.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666802.1;locus_tag=LU604_RS21155;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_016190462.1;transl_table=11 NZ_CP089942.1 cmsearch riboswitch 3996164 3996314 . - . ID=id-NZ_CP089942.1:3996164..3996314;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP089942.1 RefSeq gene 3996462 3996725 . + . ID=gene-LU604_RS21160;Name=LU604_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21160;old_locus_tag=LU604_21160 NZ_CP089942.1 Protein Homology CDS 3996462 3996725 . + 0 ID=cds-WP_016190464.1;Parent=gene-LU604_RS21160;Dbxref=Genbank:WP_016190464.1;Name=WP_016190464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369643.1;locus_tag=LU604_RS21160;product=accessory factor UbiK family protein;protein_id=WP_016190464.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3997064 3998491 . - . ID=gene-LU604_RS21165;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=LU604_RS21165;old_locus_tag=LU604_21165 NZ_CP089942.1 Protein Homology CDS 3997064 3998491 . - 0 ID=cds-WP_016190465.1;Parent=gene-LU604_RS21165;Dbxref=Genbank:WP_016190465.1;Name=WP_016190465.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017801262.1;locus_tag=LU604_RS21165;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_016190465.1;transl_table=11 NZ_CP089942.1 RefSeq gene 3998595 4001447 . - . ID=gene-LU604_RS21170;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=LU604_RS21170;old_locus_tag=LU604_21170 NZ_CP089942.1 Protein Homology CDS 3998595 4001447 . - 0 ID=cds-WP_016190466.1;Parent=gene-LU604_RS21170;Dbxref=Genbank:WP_016190466.1;Name=WP_016190466.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171847.1;locus_tag=LU604_RS21170;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_016190466.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4001498 4002802 . - . ID=gene-LU604_RS21175;Name=LU604_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21175;old_locus_tag=LU604_21175 NZ_CP089942.1 Protein Homology CDS 4001498 4002802 . - 0 ID=cds-WP_233479220.1;Parent=gene-LU604_RS21175;Dbxref=Genbank:WP_233479220.1;Name=WP_233479220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440181.1;locus_tag=LU604_RS21175;product=inorganic triphosphatase;protein_id=WP_233479220.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4003010 4003630 . + . ID=gene-LU604_RS21180;Name=LU604_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21180;old_locus_tag=LU604_21180 NZ_CP089942.1 Protein Homology CDS 4003010 4003630 . + 0 ID=cds-WP_233479221.1;Parent=gene-LU604_RS21180;Dbxref=Genbank:WP_233479221.1;Name=WP_233479221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009087298.1;locus_tag=LU604_RS21180;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_233479221.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4003757 4005001 . + . ID=gene-LU604_RS21185;Name=LU604_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21185;old_locus_tag=LU604_21185 NZ_CP089942.1 Protein Homology CDS 4003757 4005001 . + 0 ID=cds-WP_016190469.1;Parent=gene-LU604_RS21185;Dbxref=Genbank:WP_016190469.1;Name=WP_016190469.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155212.1;locus_tag=LU604_RS21185;product=multifunctional CCA addition/repair protein;protein_id=WP_016190469.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4005019 4005843 . - . ID=gene-LU604_RS21190;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=LU604_RS21190;old_locus_tag=LU604_21190 NZ_CP089942.1 Protein Homology CDS 4005019 4005843 . - 0 ID=cds-WP_016190470.1;Parent=gene-LU604_RS21190;Dbxref=Genbank:WP_016190470.1;Name=WP_016190470.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000796236.1;locus_tag=LU604_RS21190;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_016190470.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4005986 4006345 . - . ID=gene-LU604_RS21195;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=LU604_RS21195;old_locus_tag=LU604_21195 NZ_CP089942.1 Protein Homology CDS 4005986 4006345 . - 0 ID=cds-WP_016190471.1;Parent=gene-LU604_RS21195;Dbxref=Genbank:WP_016190471.1;Name=WP_016190471.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666794.1;locus_tag=LU604_RS21195;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_016190471.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4006454 4007050 . + . ID=gene-LU604_RS21200;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=LU604_RS21200;old_locus_tag=LU604_21200 NZ_CP089942.1 Protein Homology CDS 4006454 4007050 . + 0 ID=cds-WP_016190472.1;Parent=gene-LU604_RS21200;Dbxref=Genbank:WP_016190472.1;Name=WP_016190472.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666793.1;locus_tag=LU604_RS21200;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_016190472.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4007516 4008538 . - . ID=gene-LU604_RS21205;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=LU604_RS21205;old_locus_tag=LU604_21205 NZ_CP089942.1 Protein Homology CDS 4007516 4008538 . - 0 ID=cds-WP_016190473.1;Parent=gene-LU604_RS21205;Dbxref=Genbank:WP_016190473.1;Name=WP_016190473.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440175.1;locus_tag=LU604_RS21205;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_016190473.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4008843 4009058 . + . ID=gene-LU604_RS21210;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LU604_RS21210;old_locus_tag=LU604_21210 NZ_CP089942.1 Protein Homology CDS 4008843 4009058 . + 0 ID=cds-WP_001144069.1;Parent=gene-LU604_RS21210;Dbxref=Genbank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=LU604_RS21210;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4009158 4010915 . + . ID=gene-LU604_RS21215;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=LU604_RS21215;old_locus_tag=LU604_21215 NZ_CP089942.1 Protein Homology CDS 4009158 4010915 . + 0 ID=cds-WP_233479222.1;Parent=gene-LU604_RS21215;Dbxref=Genbank:WP_233479222.1;Name=WP_233479222.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190474.1;locus_tag=LU604_RS21215;product=DNA primase;protein_id=WP_233479222.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4011226 4013067 . + . ID=gene-LU604_RS21220;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=LU604_RS21220;old_locus_tag=LU604_21220 NZ_CP089942.1 Protein Homology CDS 4011226 4013067 . + 0 ID=cds-WP_233479223.1;Parent=gene-LU604_RS21220;Dbxref=Genbank:WP_233479223.1;Name=WP_233479223.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228906.1;locus_tag=LU604_RS21220;product=RNA polymerase sigma factor RpoD;protein_id=WP_233479223.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4013479 4014678 . - . ID=gene-LU604_RS21225;Name=LU604_RS21225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21225;old_locus_tag=LU604_21225;pseudo=true NZ_CP089942.1 Protein Homology CDS 4013479 4014678 . - 0 ID=cds-LU604_RS21225;Parent=gene-LU604_RS21225;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611429.1;locus_tag=LU604_RS21225;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4014715 4015308 . - . ID=gene-LU604_RS21230;Name=LU604_RS21230;end_range=4015308,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21230;old_locus_tag=LU604_21230;partial=true;pseudo=true;start_range=.,4014715 NZ_CP089942.1 Protein Homology CDS 4014715 4015308 . - 0 ID=cds-LU604_RS21230;Parent=gene-LU604_RS21230;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4015308,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322911.1;locus_tag=LU604_RS21230;partial=true;product=integrase;pseudo=true;start_range=.,4014715;transl_table=11 NZ_CP089942.1 RefSeq gene 4015678 4017288 . - . ID=gene-LU604_RS21235;Name=LU604_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21235;old_locus_tag=LU604_21235 NZ_CP089942.1 Protein Homology CDS 4015678 4017288 . - 0 ID=cds-WP_233481393.1;Parent=gene-LU604_RS21235;Dbxref=Genbank:WP_233481393.1;Name=WP_233481393.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: protein motif:HMM:NF013704.2;locus_tag=LU604_RS21235;product=DNA methyltransferase;protein_id=WP_233481393.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4017670 4018029 . + . ID=gene-LU604_RS21240;Name=LU604_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21240;old_locus_tag=LU604_21240 NZ_CP089942.1 GeneMarkS-2+ CDS 4017670 4018029 . + 0 ID=cds-WP_233481394.1;Parent=gene-LU604_RS21240;Dbxref=Genbank:WP_233481394.1;Name=WP_233481394.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS21240;product=hypothetical protein;protein_id=WP_233481394.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4018022 4018264 . - . ID=gene-LU604_RS21245;Name=LU604_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21245;old_locus_tag=LU604_21245 NZ_CP089942.1 GeneMarkS-2+ CDS 4018022 4018264 . - 0 ID=cds-WP_233481395.1;Parent=gene-LU604_RS21245;Dbxref=Genbank:WP_233481395.1;Name=WP_233481395.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS21245;product=hypothetical protein;protein_id=WP_233481395.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4018481 4018867 . + . ID=gene-LU604_RS21250;Name=LU604_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21250;old_locus_tag=LU604_21250 NZ_CP089942.1 Protein Homology CDS 4018481 4018867 . + 0 ID=cds-WP_233481396.1;Parent=gene-LU604_RS21250;Dbxref=Genbank:WP_233481396.1;Name=WP_233481396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013035748.1;locus_tag=LU604_RS21250;product=hypothetical protein;protein_id=WP_233481396.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4018845 4020077 . + . ID=gene-LU604_RS21255;Name=LU604_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21255;old_locus_tag=LU604_21255 NZ_CP089942.1 Protein Homology CDS 4018845 4020077 . + 0 ID=cds-WP_233481397.1;Parent=gene-LU604_RS21255;Dbxref=Genbank:WP_233481397.1;Name=WP_233481397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000677819.1;locus_tag=LU604_RS21255;product=relaxase/mobilization nuclease domain-containing protein;protein_id=WP_233481397.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4020330 4020905 . + . ID=gene-LU604_RS21260;Name=LU604_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21260;old_locus_tag=LU604_21260 NZ_CP089942.1 Protein Homology CDS 4020330 4020905 . + 0 ID=cds-WP_233481398.1;Parent=gene-LU604_RS21260;Dbxref=Genbank:WP_233481398.1;Name=WP_233481398.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027277.2;locus_tag=LU604_RS21260;product=DUF4755 domain-containing protein;protein_id=WP_233481398.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4020909 4021289 . + . ID=gene-LU604_RS21265;Name=LU604_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21265;old_locus_tag=LU604_21265 NZ_CP089942.1 GeneMarkS-2+ CDS 4020909 4021289 . + 0 ID=cds-WP_233481399.1;Parent=gene-LU604_RS21265;Dbxref=Genbank:WP_233481399.1;Name=WP_233481399.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS21265;product=hypothetical protein;protein_id=WP_233481399.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4021397 4021738 . + . ID=gene-LU604_RS21270;Name=LU604_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21270;old_locus_tag=LU604_21270 NZ_CP089942.1 GeneMarkS-2+ CDS 4021397 4021738 . + 0 ID=cds-WP_233481400.1;Parent=gene-LU604_RS21270;Dbxref=Genbank:WP_233481400.1;Name=WP_233481400.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS21270;product=hypothetical protein;protein_id=WP_233481400.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4021905 4022720 . - . ID=gene-LU604_RS21275;Name=LU604_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21275;old_locus_tag=LU604_21275 NZ_CP089942.1 GeneMarkS-2+ CDS 4021905 4022720 . - 0 ID=cds-WP_233481401.1;Parent=gene-LU604_RS21275;Dbxref=Genbank:WP_233481401.1;Name=WP_233481401.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS21275;product=serine protease;protein_id=WP_233481401.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4022814 4023128 . + . ID=gene-LU604_RS21280;Name=LU604_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21280;old_locus_tag=LU604_21280 NZ_CP089942.1 GeneMarkS-2+ CDS 4022814 4023128 . + 0 ID=cds-WP_233481402.1;Parent=gene-LU604_RS21280;Dbxref=Genbank:WP_233481402.1;Name=WP_233481402.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS21280;product=hypothetical protein;protein_id=WP_233481402.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4023130 4023918 . - . ID=gene-LU604_RS21285;Name=LU604_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21285;old_locus_tag=LU604_21285 NZ_CP089942.1 Protein Homology CDS 4023130 4023918 . - 0 ID=cds-WP_233481403.1;Parent=gene-LU604_RS21285;Dbxref=Genbank:WP_233481403.1;Name=WP_233481403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008926506.1;locus_tag=LU604_RS21285;product=DUF4225 domain-containing protein;protein_id=WP_233481403.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4024001 4024483 . + . ID=gene-LU604_RS21290;Name=LU604_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21290;old_locus_tag=LU604_21290 NZ_CP089942.1 Protein Homology CDS 4024001 4024483 . + 0 ID=cds-WP_233481404.1;Parent=gene-LU604_RS21290;Dbxref=Genbank:WP_233481404.1;Name=WP_233481404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366565.1;locus_tag=LU604_RS21290;product=type VI secretion system tube protein Hcp;protein_id=WP_233481404.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4024967 4025134 . + . ID=gene-LU604_RS21295;Name=LU604_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21295;old_locus_tag=LU604_21295 NZ_CP089942.1 Protein Homology CDS 4024967 4025134 . + 0 ID=cds-WP_233481405.1;Parent=gene-LU604_RS21295;Dbxref=Genbank:WP_233481405.1;Name=WP_233481405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304217.1;locus_tag=LU604_RS21295;product=hypothetical protein;protein_id=WP_233481405.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4025157 4025762 . + . ID=gene-LU604_RS21300;Name=LU604_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21300;old_locus_tag=LU604_21300 NZ_CP089942.1 Protein Homology CDS 4025157 4025762 . + 0 ID=cds-WP_233481406.1;Parent=gene-LU604_RS21300;Dbxref=Genbank:WP_233481406.1;Name=WP_233481406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192173.1;locus_tag=LU604_RS21300;product=hypothetical protein;protein_id=WP_233481406.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4025769 4025903 . - . ID=gene-LU604_RS27070;Name=LU604_RS27070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27070 NZ_CP089942.1 GeneMarkS-2+ CDS 4025769 4025903 . - 0 ID=cds-WP_267938693.1;Parent=gene-LU604_RS27070;Dbxref=Genbank:WP_267938693.1;Name=WP_267938693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS27070;product=hypothetical protein;protein_id=WP_267938693.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4026284 4027324 . + . ID=gene-LU604_RS21305;Name=LU604_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21305;old_locus_tag=LU604_21305 NZ_CP089942.1 Protein Homology CDS 4026284 4027324 . + 0 ID=cds-WP_233478553.1-27;Parent=gene-LU604_RS21305;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS21305;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4027385 4030102 . - . ID=gene-LU604_RS21310;Name=LU604_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21310;old_locus_tag=LU604_21310 NZ_CP089942.1 Protein Homology CDS 4027385 4030102 . - 0 ID=cds-WP_233481407.1;Parent=gene-LU604_RS21310;Dbxref=Genbank:WP_233481407.1;Name=WP_233481407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005969945.1;locus_tag=LU604_RS21310;product=DUF927 domain-containing protein;protein_id=WP_233481407.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4030167 4030523 . - . ID=gene-LU604_RS21315;Name=LU604_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21315;old_locus_tag=LU604_21315 NZ_CP089942.1 GeneMarkS-2+ CDS 4030167 4030523 . - 0 ID=cds-WP_233481408.1;Parent=gene-LU604_RS21315;Dbxref=Genbank:WP_233481408.1;Name=WP_233481408.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS21315;product=hypothetical protein;protein_id=WP_233481408.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4030577 4030822 . - . ID=gene-LU604_RS21320;Name=LU604_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21320;old_locus_tag=LU604_21320 NZ_CP089942.1 GeneMarkS-2+ CDS 4030577 4030822 . - 0 ID=cds-WP_233481409.1;Parent=gene-LU604_RS21320;Dbxref=Genbank:WP_233481409.1;Name=WP_233481409.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS21320;product=hypothetical protein;protein_id=WP_233481409.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4030923 4031117 . - . ID=gene-LU604_RS21325;Name=LU604_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21325;old_locus_tag=LU604_21325 NZ_CP089942.1 GeneMarkS-2+ CDS 4030923 4031117 . - 0 ID=cds-WP_233481410.1;Parent=gene-LU604_RS21325;Dbxref=Genbank:WP_233481410.1;Name=WP_233481410.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS21325;product=hypothetical protein;protein_id=WP_233481410.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4031110 4031301 . - . ID=gene-LU604_RS21330;Name=LU604_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21330;old_locus_tag=LU604_21330 NZ_CP089942.1 GeneMarkS-2+ CDS 4031110 4031301 . - 0 ID=cds-WP_233481411.1;Parent=gene-LU604_RS21330;Dbxref=Genbank:WP_233481411.1;Name=WP_233481411.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS21330;product=hypothetical protein;protein_id=WP_233481411.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4031294 4031776 . - . ID=gene-LU604_RS21335;Name=LU604_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21335;old_locus_tag=LU604_21335 NZ_CP089942.1 Protein Homology CDS 4031294 4031776 . - 0 ID=cds-WP_233481412.1;Parent=gene-LU604_RS21335;Dbxref=Genbank:WP_233481412.1;Name=WP_233481412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106102.1;locus_tag=LU604_RS21335;product=host cell division inhibitor Icd-like protein;protein_id=WP_233481412.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4031992 4032222 . - . ID=gene-LU604_RS21340;Name=LU604_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21340;old_locus_tag=LU604_21340 NZ_CP089942.1 Protein Homology CDS 4031992 4032222 . - 0 ID=cds-WP_233481413.1;Parent=gene-LU604_RS21340;Dbxref=Genbank:WP_233481413.1;Name=WP_233481413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534484.1;locus_tag=LU604_RS21340;product=AlpA family phage regulatory protein;protein_id=WP_233481413.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4032601 4033242 . - . ID=gene-LU604_RS21345;Name=LU604_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21345;old_locus_tag=LU604_21345 NZ_CP089942.1 Protein Homology CDS 4032601 4033242 . - 0 ID=cds-WP_233481648.1;Parent=gene-LU604_RS21345;Dbxref=Genbank:WP_233481648.1;Name=WP_233481648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066529.1;locus_tag=LU604_RS21345;product=hypothetical protein;protein_id=WP_233481648.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4033289 4034551 . - . ID=gene-LU604_RS21350;Name=LU604_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21350;old_locus_tag=LU604_21350 NZ_CP089942.1 Protein Homology CDS 4033289 4034551 . - 0 ID=cds-WP_233481414.1;Parent=gene-LU604_RS21350;Dbxref=Genbank:WP_233481414.1;Name=WP_233481414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000772652.1;locus_tag=LU604_RS21350;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_233481414.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4034715 4034799 . - . ID=gene-LU604_RS21355;Name=LU604_RS21355;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS21355;old_locus_tag=LU604_21355 NZ_CP089942.1 tRNAscan-SE tRNA 4034715 4034799 . - . ID=rna-LU604_RS21355;Parent=gene-LU604_RS21355;anticodon=(pos:complement(4034763..4034765));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS21355;product=tRNA-Leu NZ_CP089942.1 tRNAscan-SE exon 4034715 4034799 . - . ID=exon-LU604_RS21355-1;Parent=rna-LU604_RS21355;anticodon=(pos:complement(4034763..4034765));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS21355;product=tRNA-Leu NZ_CP089942.1 RefSeq gene 4035197 4035697 . + . ID=gene-LU604_RS21360;Name=LU604_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21360;old_locus_tag=LU604_21360 NZ_CP089942.1 Protein Homology CDS 4035197 4035697 . + 0 ID=cds-WP_016190494.1;Parent=gene-LU604_RS21360;Dbxref=Genbank:WP_016190494.1;Name=WP_016190494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001308243.1;locus_tag=LU604_RS21360;product=DUF2501 domain-containing protein;protein_id=WP_016190494.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4035781 4036221 . - . ID=gene-LU604_RS21365;Name=LU604_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21365;old_locus_tag=LU604_21365 NZ_CP089942.1 Protein Homology CDS 4035781 4036221 . - 0 ID=cds-WP_233480861.1;Parent=gene-LU604_RS21365;Dbxref=Genbank:WP_233480861.1;Name=WP_233480861.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: protein motif:HMM:NF013933.2;locus_tag=LU604_RS21365;product=LysE family transporter;protein_id=WP_233480861.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4036203 4036361 . - . ID=gene-LU604_RS21370;Name=LU604_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21370;old_locus_tag=LU604_21370 NZ_CP089942.1 GeneMarkS-2+ CDS 4036203 4036361 . - 0 ID=cds-WP_233481415.1;Parent=gene-LU604_RS21370;Dbxref=Genbank:WP_233481415.1;Name=WP_233481415.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS21370;product=hypothetical protein;protein_id=WP_233481415.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4036541 4037923 . + . ID=gene-LU604_RS21375;Name=LU604_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21375;old_locus_tag=LU604_21375 NZ_CP089942.1 GeneMarkS-2+ CDS 4036541 4037923 . + 0 ID=cds-WP_233479233.1;Parent=gene-LU604_RS21375;Dbxref=Genbank:WP_233479233.1;Name=WP_233479233.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS21375;product=hypothetical protein;protein_id=WP_233479233.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4038084 4039373 . + . ID=gene-LU604_RS21380;Name=LU604_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21380;old_locus_tag=LU604_21380 NZ_CP089942.1 Protein Homology CDS 4038084 4039373 . + 0 ID=cds-WP_233480862.1;Parent=gene-LU604_RS21380;Dbxref=Genbank:WP_233480862.1;Name=WP_233480862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121813.1;locus_tag=LU604_RS21380;product=DUF445 family protein;protein_id=WP_233480862.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4039686 4040762 . - . ID=gene-LU604_RS21385;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=LU604_RS21385;old_locus_tag=LU604_21385 NZ_CP089942.1 Protein Homology CDS 4039686 4040762 . - 0 ID=cds-WP_016190498.1;Parent=gene-LU604_RS21385;Dbxref=Genbank:WP_016190498.1;Name=WP_016190498.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155164.1;locus_tag=LU604_RS21385;product=LPS export ABC transporter permease LptG;protein_id=WP_016190498.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4040762 4041862 . - . ID=gene-LU604_RS21390;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=LU604_RS21390;old_locus_tag=LU604_21390 NZ_CP089942.1 Protein Homology CDS 4040762 4041862 . - 0 ID=cds-WP_016190499.1;Parent=gene-LU604_RS21390;Dbxref=Genbank:WP_016190499.1;Name=WP_016190499.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155163.1;locus_tag=LU604_RS21390;product=LPS export ABC transporter permease LptF;protein_id=WP_016190499.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4042153 4043664 . + . ID=gene-LU604_RS21395;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=LU604_RS21395;old_locus_tag=LU604_21395 NZ_CP089942.1 Protein Homology CDS 4042153 4043664 . + 0 ID=cds-WP_016190500.1;Parent=gene-LU604_RS21395;Dbxref=Genbank:WP_016190500.1;Name=WP_016190500.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007767120.1;locus_tag=LU604_RS21395;product=leucyl aminopeptidase;protein_id=WP_016190500.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4043668 4044123 . + . ID=gene-LU604_RS21400;Name=LU604_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21400;old_locus_tag=LU604_21400 NZ_CP089942.1 Protein Homology CDS 4043668 4044123 . + 0 ID=cds-WP_016190501.1;Parent=gene-LU604_RS21400;Dbxref=Genbank:WP_016190501.1;Name=WP_016190501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666754.1;locus_tag=LU604_RS21400;product=DNA polymerase III subunit chi;protein_id=WP_016190501.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4044129 4046984 . + . ID=gene-LU604_RS21405;Name=LU604_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21405;old_locus_tag=LU604_21405 NZ_CP089942.1 Protein Homology CDS 4044129 4046984 . + 0 ID=cds-WP_233479234.1;Parent=gene-LU604_RS21405;Dbxref=Genbank:WP_233479234.1;Name=WP_233479234.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=LU604_RS21405;product=valine--tRNA ligase;protein_id=WP_233479234.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4047057 4048097 . - . ID=gene-LU604_RS21410;Name=LU604_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21410;old_locus_tag=LU604_21410 NZ_CP089942.1 Protein Homology CDS 4047057 4048097 . - 0 ID=cds-WP_233478553.1-28;Parent=gene-LU604_RS21410;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS21410;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4048790 4049821 . - . ID=gene-LU604_RS21415;Name=LU604_RS21415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21415;old_locus_tag=LU604_21415;pseudo=true NZ_CP089942.1 Protein Homology CDS 4048790 4049821 . - 0 ID=cds-LU604_RS21415;Parent=gene-LU604_RS21415;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558178.1;locus_tag=LU604_RS21415;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4049896 4050483 . - . ID=gene-LU604_RS21420;Name=LU604_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21420;old_locus_tag=LU604_21420 NZ_CP089942.1 Protein Homology CDS 4049896 4050483 . - 0 ID=cds-WP_233479235.1;Parent=gene-LU604_RS21420;Dbxref=Genbank:WP_233479235.1;Name=WP_233479235.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF017640.2;locus_tag=LU604_RS21420;product=replication endonuclease;protein_id=WP_233479235.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4050848 4051168 . - . ID=gene-LU604_RS21425;Name=LU604_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21425;old_locus_tag=LU604_21425 NZ_CP089942.1 GeneMarkS-2+ CDS 4050848 4051168 . - 0 ID=cds-WP_233479236.1;Parent=gene-LU604_RS21425;Dbxref=Genbank:WP_233479236.1;Name=WP_233479236.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS21425;product=hypothetical protein;protein_id=WP_233479236.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4051250 4053115 . - . ID=gene-LU604_RS21430;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=LU604_RS21430;old_locus_tag=LU604_21430 NZ_CP089942.1 Protein Homology CDS 4051250 4053115 . - 0 ID=cds-WP_233479237.1;Parent=gene-LU604_RS21430;Dbxref=Genbank:WP_233479237.1;Name=WP_233479237.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190512.1;locus_tag=LU604_RS21430;product=low affinity potassium transporter Kup;protein_id=WP_233479237.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4053417 4054850 . + . ID=gene-LU604_RS21435;Name=LU604_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21435;old_locus_tag=LU604_21435 NZ_CP089942.1 Protein Homology CDS 4053417 4054850 . + 0 ID=cds-WP_233479238.1;Parent=gene-LU604_RS21435;Dbxref=Genbank:WP_233479238.1;Name=WP_233479238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190510.1;locus_tag=LU604_RS21435;product=trehalose-6-phosphate synthase;protein_id=WP_233479238.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4054948 4055958 . - . ID=gene-LU604_RS21440;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=LU604_RS21440;old_locus_tag=LU604_21440 NZ_CP089942.1 Protein Homology CDS 4054948 4055958 . - 0 ID=cds-WP_233479239.1;Parent=gene-LU604_RS21440;Dbxref=Genbank:WP_233479239.1;Name=WP_233479239.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851006.1;locus_tag=LU604_RS21440;product=ornithine carbamoyltransferase;protein_id=WP_233479239.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4056116 4056532 . + . ID=gene-LU604_RS21445;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=LU604_RS21445;old_locus_tag=LU604_21445 NZ_CP089942.1 Protein Homology CDS 4056116 4056532 . + 0 ID=cds-WP_233479240.1;Parent=gene-LU604_RS21445;Dbxref=Genbank:WP_233479240.1;Name=WP_233479240.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440126.1;locus_tag=LU604_RS21445;product=ribonuclease E inhibitor RraB;protein_id=WP_233479240.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4056642 4057405 . + . ID=gene-LU604_RS21450;Name=LU604_RS21450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21450;old_locus_tag=LU604_21450;pseudo=true NZ_CP089942.1 Protein Homology CDS 4056642 4057405 . + 0 ID=cds-LU604_RS21450;Parent=gene-LU604_RS21450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190507.1;locus_tag=LU604_RS21450;product=tRNA-(ms[2]io[6]A)-hydroxylase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4057482 4058178 . + . ID=gene-LU604_RS21455;Name=LU604_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21455;old_locus_tag=LU604_21455 NZ_CP089942.1 Protein Homology CDS 4057482 4057735 . + 0 ID=cds-WP_233481416.1;Parent=gene-LU604_RS21455;Dbxref=Genbank:WP_233481416.1;Name=WP_233481416.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS21455;product=IS1 family transposase;protein_id=WP_233481416.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 4057734 4058178 . + 1 ID=cds-WP_233481416.1;Parent=gene-LU604_RS21455;Dbxref=Genbank:WP_233481416.1;Name=WP_233481416.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS21455;product=IS1 family transposase;protein_id=WP_233481416.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4058203 4058664 . + . ID=gene-LU604_RS21460;Name=LU604_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21460;old_locus_tag=LU604_21460 NZ_CP089942.1 Protein Homology CDS 4058203 4058664 . + 0 ID=cds-WP_233479242.1;Parent=gene-LU604_RS21460;Dbxref=Genbank:WP_233479242.1;Name=WP_233479242.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012521.2;locus_tag=LU604_RS21460;product=phosphoglycerate mutase family protein;protein_id=WP_233479242.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4058888 4059391 . - . ID=gene-LU604_RS21465;Name=LU604_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21465;old_locus_tag=LU604_21465 NZ_CP089942.1 Protein Homology CDS 4058888 4059391 . - 0 ID=cds-WP_233479243.1;Parent=gene-LU604_RS21465;Dbxref=Genbank:WP_233479243.1;Name=WP_233479243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008104250.1;locus_tag=LU604_RS21465;product=GNAT family N-acetyltransferase;protein_id=WP_233479243.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4059582 4060250 . + . ID=gene-LU604_RS21470;Name=LU604_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21470;old_locus_tag=LU604_21470 NZ_CP089942.1 GeneMarkS-2+ CDS 4059582 4060250 . + 0 ID=cds-WP_233479244.1;Parent=gene-LU604_RS21470;Dbxref=Genbank:WP_233479244.1;Name=WP_233479244.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS21470;product=hypothetical protein;protein_id=WP_233479244.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4060526 4061566 . + . ID=gene-LU604_RS21475;Name=LU604_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21475;old_locus_tag=LU604_21475 NZ_CP089942.1 Protein Homology CDS 4060526 4061566 . + 0 ID=cds-WP_233479095.1;Parent=gene-LU604_RS21475;Dbxref=Genbank:WP_233479095.1;Name=WP_233479095.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS21475;product=IS481 family transposase;protein_id=WP_233479095.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4061708 4062025 . + . ID=gene-LU604_RS21480;Name=LU604_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21480;old_locus_tag=LU604_21480 NZ_CP089942.1 GeneMarkS-2+ CDS 4061708 4062025 . + 0 ID=cds-WP_233479245.1;Parent=gene-LU604_RS21480;Dbxref=Genbank:WP_233479245.1;Name=WP_233479245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS21480;product=hypothetical protein;protein_id=WP_233479245.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4062307 4062747 . - . ID=gene-LU604_RS21485;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS21485;old_locus_tag=LU604_21485;partial=true;pseudo=true;start_range=.,4062307 NZ_CP089942.1 Protein Homology CDS 4062307 4062747 . - 0 ID=cds-LU604_RS21485;Parent=gene-LU604_RS21485;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000525033.1;locus_tag=LU604_RS21485;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,4062307;transl_table=11 NZ_CP089942.1 RefSeq gene 4063026 4063961 . + . ID=gene-LU604_RS21490;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=LU604_RS21490;old_locus_tag=LU604_21490 NZ_CP089942.1 Protein Homology CDS 4063026 4063961 . + 0 ID=cds-WP_016190518.1;Parent=gene-LU604_RS21490;Dbxref=Genbank:WP_016190518.1;Name=WP_016190518.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012125907.1;locus_tag=LU604_RS21490;product=aspartate carbamoyltransferase;protein_id=WP_016190518.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4063972 4064436 . + . ID=gene-LU604_RS21495;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=LU604_RS21495;old_locus_tag=LU604_21495 NZ_CP089942.1 Protein Homology CDS 4063972 4064436 . + 0 ID=cds-WP_233479246.1;Parent=gene-LU604_RS21495;Dbxref=Genbank:WP_233479246.1;Name=WP_233479246.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrI;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010251684.1;locus_tag=LU604_RS21495;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_233479246.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4064557 4064943 . + . ID=gene-LU604_RS21500;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=LU604_RS21500;old_locus_tag=LU604_21500 NZ_CP089942.1 Protein Homology CDS 4064557 4064943 . + 0 ID=cds-WP_016190520.1;Parent=gene-LU604_RS21500;Dbxref=Genbank:WP_016190520.1;Name=WP_016190520.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=LU604_RS21500;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_016190520.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4065145 4066824 . + . ID=gene-LU604_RS21505;Name=LU604_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21505;old_locus_tag=LU604_21505 NZ_CP089942.1 Protein Homology CDS 4065145 4066824 . + 0 ID=cds-WP_233479247.1;Parent=gene-LU604_RS21505;Dbxref=Genbank:WP_233479247.1;Name=WP_233479247.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190521.1;locus_tag=LU604_RS21505;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_233479247.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4066811 4069387 . - . ID=gene-LU604_RS21510;Name=LU604_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21510;old_locus_tag=LU604_21510 NZ_CP089942.1 Protein Homology CDS 4066811 4069387 . - 0 ID=cds-WP_233479248.1;Parent=gene-LU604_RS21510;Dbxref=Genbank:WP_233479248.1;Name=WP_233479248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190522.1;locus_tag=LU604_RS21510;product=DEAD/DEAH box helicase;protein_id=WP_233479248.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4069647 4071785 . + . ID=gene-LU604_RS21515;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=LU604_RS21515;old_locus_tag=LU604_21515 NZ_CP089942.1 Protein Homology CDS 4069647 4071785 . + 0 ID=cds-WP_016190523.1;Parent=gene-LU604_RS21515;Dbxref=Genbank:WP_016190523.1;Name=WP_016190523.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=LU604_RS21515;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_016190523.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4071782 4072246 . + . ID=gene-LU604_RS21520;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=LU604_RS21520;old_locus_tag=LU604_21520 NZ_CP089942.1 Protein Homology CDS 4071782 4072246 . + 0 ID=cds-WP_016190524.1;Parent=gene-LU604_RS21520;Dbxref=Genbank:WP_016190524.1;Name=WP_016190524.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224790.1;locus_tag=LU604_RS21520;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_016190524.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4072252 4072680 . - . ID=gene-LU604_RS21525;Name=LU604_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21525;old_locus_tag=LU604_21525 NZ_CP089942.1 Protein Homology CDS 4072252 4072680 . - 0 ID=cds-WP_233479249.1;Parent=gene-LU604_RS21525;Dbxref=Genbank:WP_233479249.1;Name=WP_233479249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190525.1;locus_tag=LU604_RS21525;product=YhbP family protein;protein_id=WP_233479249.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4072795 4073100 . + . ID=gene-LU604_RS21530;Name=LU604_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21530;old_locus_tag=LU604_21530 NZ_CP089942.1 Protein Homology CDS 4072795 4073100 . + 0 ID=cds-WP_016190526.1;Parent=gene-LU604_RS21530;Dbxref=Genbank:WP_016190526.1;Name=WP_016190526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851049.1;locus_tag=LU604_RS21530;product=GIY-YIG nuclease family protein;protein_id=WP_016190526.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4073077 4073580 . - . ID=gene-LU604_RS21535;Name=LU604_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21535;old_locus_tag=LU604_21535 NZ_CP089942.1 Protein Homology CDS 4073077 4073580 . - 0 ID=cds-WP_233479251.1;Parent=gene-LU604_RS21535;Dbxref=Genbank:WP_233479251.1;Name=WP_233479251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543113.1;locus_tag=LU604_RS21535;product=N-acetyltransferase;protein_id=WP_233479251.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4073574 4074098 . - . ID=gene-LU604_RS21540;Name=LU604_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21540;old_locus_tag=LU604_21540 NZ_CP089942.1 Protein Homology CDS 4073574 4074098 . - 0 ID=cds-WP_233479252.1;Parent=gene-LU604_RS21540;Dbxref=Genbank:WP_233479252.1;Name=WP_233479252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190528.1;locus_tag=LU604_RS21540;product=SCP2 domain-containing protein;protein_id=WP_233479252.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4074304 4075299 . + . ID=gene-LU604_RS21545;Name=LU604_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21545;old_locus_tag=LU604_21545 NZ_CP089942.1 Protein Homology CDS 4074304 4075299 . + 0 ID=cds-WP_016190529.1;Parent=gene-LU604_RS21545;Dbxref=Genbank:WP_016190529.1;Name=WP_016190529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=LU604_RS21545;product=U32 family peptidase;protein_id=WP_016190529.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4075290 4076201 . + . ID=gene-LU604_RS21550;Name=LU604_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21550;old_locus_tag=LU604_21550 NZ_CP089942.1 Protein Homology CDS 4075290 4076201 . + 0 ID=cds-WP_233481417.1;Parent=gene-LU604_RS21550;Dbxref=Genbank:WP_233481417.1;Name=WP_233481417.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785909.1;locus_tag=LU604_RS21550;product=U32 family peptidase;protein_id=WP_233481417.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4076273 4076783 . + . ID=gene-LU604_RS21555;Name=LU604_RS21555;end_range=4076783,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21555;old_locus_tag=LU604_21555;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4076273 4076783 . + 0 ID=cds-LU604_RS21555;Parent=gene-LU604_RS21555;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=4076783,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS21555;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4076706 4077768 . - . ID=gene-LU604_RS21560;Name=LU604_RS21560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21560;old_locus_tag=LU604_21560;pseudo=true NZ_CP089942.1 Protein Homology CDS 4076706 4077768 . - 0 ID=cds-LU604_RS21560;Parent=gene-LU604_RS21560;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315785.1;locus_tag=LU604_RS21560;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4077866 4078303 . - . ID=gene-LU604_RS21565;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS21565;old_locus_tag=LU604_21565;pseudo=true NZ_CP089942.1 Protein Homology CDS 4077866 4078303 . - 0 ID=cds-LU604_RS21565;Parent=gene-LU604_RS21565;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU604_RS21565;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4078556 4080415 . - . ID=gene-LU604_RS21570;Name=LU604_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21570;old_locus_tag=LU604_21570 NZ_CP089942.1 Protein Homology CDS 4078556 4080415 . - 0 ID=cds-WP_233481418.1;Parent=gene-LU604_RS21570;Dbxref=Genbank:WP_233481418.1;Name=WP_233481418.1;Ontology_term=GO:0000027,GO:0003724,GO:0005524;gbkey=CDS;go_function=RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190534.1;locus_tag=LU604_RS21570;product=DEAD/DEAH family ATP-dependent RNA helicase;protein_id=WP_233481418.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4080592 4081476 . - . ID=gene-LU604_RS21575;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=LU604_RS21575;old_locus_tag=LU604_21575 NZ_CP089942.1 Protein Homology CDS 4080592 4081476 . - 0 ID=cds-WP_016190535.1;Parent=gene-LU604_RS21575;Dbxref=Genbank:WP_016190535.1;Name=WP_016190535.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=LU604_RS21575;product=lipoprotein NlpI;protein_id=WP_016190535.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4081615 4083744 . - . ID=gene-LU604_RS21580;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=LU604_RS21580;old_locus_tag=LU604_21580 NZ_CP089942.1 Protein Homology CDS 4081615 4083744 . - 0 ID=cds-WP_233479255.1;Parent=gene-LU604_RS21580;Dbxref=Genbank:WP_233479255.1;Name=WP_233479255.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440112.1;locus_tag=LU604_RS21580;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_233479255.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4084044 4084313 . - . ID=gene-LU604_RS21585;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=LU604_RS21585;old_locus_tag=LU604_21585 NZ_CP089942.1 Protein Homology CDS 4084044 4084313 . - 0 ID=cds-WP_016190537.1;Parent=gene-LU604_RS21585;Dbxref=Genbank:WP_016190537.1;Name=WP_016190537.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=LU604_RS21585;product=30S ribosomal protein S15;protein_id=WP_016190537.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4084423 4085367 . - . ID=gene-LU604_RS21590;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=LU604_RS21590;old_locus_tag=LU604_21590 NZ_CP089942.1 Protein Homology CDS 4084423 4085367 . - 0 ID=cds-WP_016190538.1;Parent=gene-LU604_RS21590;Dbxref=Genbank:WP_016190538.1;Name=WP_016190538.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004949.1;locus_tag=LU604_RS21590;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_016190538.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4085367 4085768 . - . ID=gene-LU604_RS21595;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=LU604_RS21595;old_locus_tag=LU604_21595 NZ_CP089942.1 Protein Homology CDS 4085367 4085768 . - 0 ID=cds-WP_016190539.1;Parent=gene-LU604_RS21595;Dbxref=Genbank:WP_016190539.1;Name=WP_016190539.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462198.1;locus_tag=LU604_RS21595;product=30S ribosome-binding factor RbfA;protein_id=WP_016190539.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4085921 4088605 . - . ID=gene-LU604_RS21600;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=LU604_RS21600;old_locus_tag=LU604_21600 NZ_CP089942.1 Protein Homology CDS 4085921 4088605 . - 0 ID=cds-WP_016190540.1;Parent=gene-LU604_RS21600;Dbxref=Genbank:WP_016190540.1;Name=WP_016190540.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015701096.1;locus_tag=LU604_RS21600;product=translation initiation factor IF-2;protein_id=WP_016190540.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4088630 4090135 . - . ID=gene-LU604_RS21605;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=LU604_RS21605;old_locus_tag=LU604_21605 NZ_CP089942.1 Protein Homology CDS 4088630 4090135 . - 0 ID=cds-WP_016190541.1;Parent=gene-LU604_RS21605;Dbxref=Genbank:WP_016190541.1;Name=WP_016190541.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=LU604_RS21605;product=transcription termination factor NusA;protein_id=WP_016190541.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4090160 4090612 . - . ID=gene-LU604_RS21610;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=LU604_RS21610;old_locus_tag=LU604_21610 NZ_CP089942.1 Protein Homology CDS 4090160 4090612 . - 0 ID=cds-WP_016190542.1;Parent=gene-LU604_RS21610;Dbxref=Genbank:WP_016190542.1;Name=WP_016190542.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=LU604_RS21610;product=ribosome maturation factor RimP;protein_id=WP_016190542.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4090821 4090897 . - . ID=gene-LU604_RS21615;Name=LU604_RS21615;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS21615;old_locus_tag=LU604_21615 NZ_CP089942.1 tRNAscan-SE tRNA 4090821 4090897 . - . ID=rna-LU604_RS21615;Parent=gene-LU604_RS21615;anticodon=(pos:complement(4090861..4090863));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS21615;product=tRNA-Met NZ_CP089942.1 tRNAscan-SE exon 4090821 4090897 . - . ID=exon-LU604_RS21615-1;Parent=rna-LU604_RS21615;anticodon=(pos:complement(4090861..4090863));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS21615;product=tRNA-Met NZ_CP089942.1 RefSeq gene 4090957 4091043 . - . ID=gene-LU604_RS21620;Name=LU604_RS21620;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS21620;old_locus_tag=LU604_21620 NZ_CP089942.1 tRNAscan-SE tRNA 4090957 4091043 . - . ID=rna-LU604_RS21620;Parent=gene-LU604_RS21620;anticodon=(pos:complement(4091007..4091009));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS21620;product=tRNA-Leu NZ_CP089942.1 tRNAscan-SE exon 4090957 4091043 . - . ID=exon-LU604_RS21620-1;Parent=rna-LU604_RS21620;anticodon=(pos:complement(4091007..4091009));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS21620;product=tRNA-Leu NZ_CP089942.1 RefSeq gene 4091094 4091429 . - . ID=gene-LU604_RS21625;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=LU604_RS21625;old_locus_tag=LU604_21625 NZ_CP089942.1 Protein Homology CDS 4091094 4091429 . - 0 ID=cds-WP_016190543.1;Parent=gene-LU604_RS21625;Dbxref=Genbank:WP_016190543.1;Name=WP_016190543.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312081.1;locus_tag=LU604_RS21625;product=preprotein translocase subunit SecG;protein_id=WP_016190543.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4091731 4093065 . - . ID=gene-LU604_RS21630;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=LU604_RS21630;old_locus_tag=LU604_21630 NZ_CP089942.1 Protein Homology CDS 4091731 4093065 . - 0 ID=cds-WP_016190544.1;Parent=gene-LU604_RS21630;Dbxref=Genbank:WP_016190544.1;Name=WP_016190544.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440104.1;locus_tag=LU604_RS21630;product=phosphoglucosamine mutase;protein_id=WP_016190544.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4093070 4093906 . - . ID=gene-LU604_RS21635;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=LU604_RS21635;old_locus_tag=LU604_21635 NZ_CP089942.1 Protein Homology CDS 4093070 4093906 . - 0 ID=cds-WP_233480863.1;Parent=gene-LU604_RS21635;Dbxref=Genbank:WP_233480863.1;Name=WP_233480863.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168055.1;locus_tag=LU604_RS21635;product=dihydropteroate synthase;protein_id=WP_233480863.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4094205 4095200 . - . ID=gene-LU604_RS21640;Name=LU604_RS21640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21640;old_locus_tag=LU604_21640;pseudo=true NZ_CP089942.1 Protein Homology CDS 4094205 4095200 . - 0 ID=cds-LU604_RS21640;Parent=gene-LU604_RS21640;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315785.1;locus_tag=LU604_RS21640;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4095309 4097240 . - . ID=gene-LU604_RS21645;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=LU604_RS21645;old_locus_tag=LU604_21645 NZ_CP089942.1 Protein Homology CDS 4095309 4097240 . - 0 ID=cds-WP_233479256.1;Parent=gene-LU604_RS21645;Dbxref=Genbank:WP_233479256.1;Name=WP_233479256.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=LU604_RS21645;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_233479256.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4097296 4097925 . - . ID=gene-LU604_RS21650;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=LU604_RS21650;old_locus_tag=LU604_21650 NZ_CP089942.1 Protein Homology CDS 4097296 4097925 . - 0 ID=cds-WP_233479257.1;Parent=gene-LU604_RS21650;Dbxref=Genbank:WP_233479257.1;Name=WP_233479257.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156285.1;locus_tag=LU604_RS21650;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_233479257.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4098052 4098345 . + . ID=gene-LU604_RS21655;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=LU604_RS21655;old_locus_tag=LU604_21655 NZ_CP089942.1 Protein Homology CDS 4098052 4098345 . + 0 ID=cds-WP_233479258.1;Parent=gene-LU604_RS21655;Dbxref=Genbank:WP_233479258.1;Name=WP_233479258.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=LU604_RS21655;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_233479258.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4098539 4099519 . - . ID=gene-LU604_RS21660;Name=LU604_RS21660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21660;old_locus_tag=LU604_21660;pseudo=true NZ_CP089942.1 Protein Homology CDS 4098539 4099519 . - 0 ID=cds-LU604_RS21660;Parent=gene-LU604_RS21660;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013574788.1;locus_tag=LU604_RS21660;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4099583 4099882 . - . ID=gene-LU604_RS21665;Name=LU604_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21665;old_locus_tag=LU604_21665 NZ_CP089942.1 Protein Homology CDS 4099583 4099882 . - 0 ID=cds-WP_233479259.1;Parent=gene-LU604_RS21665;Dbxref=Genbank:WP_233479259.1;Name=WP_233479259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004956618.1;locus_tag=LU604_RS21665;product=helix-turn-helix transcriptional regulator;protein_id=WP_233479259.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4100252 4100500 . + . ID=gene-LU604_RS21670;Name=LU604_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21670;old_locus_tag=LU604_21670 NZ_CP089942.1 Protein Homology CDS 4100252 4100500 . + 0 ID=cds-WP_233479260.1;Parent=gene-LU604_RS21670;Dbxref=Genbank:WP_233479260.1;Name=WP_233479260.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022029.2;locus_tag=LU604_RS21670;product=ash family protein;protein_id=WP_233479260.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4100546 4100725 . + . ID=gene-LU604_RS21675;Name=LU604_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21675;old_locus_tag=LU604_21675 NZ_CP089942.1 Protein Homology CDS 4100546 4100725 . + 0 ID=cds-WP_233479261.1;Parent=gene-LU604_RS21675;Dbxref=Genbank:WP_233479261.1;Name=WP_233479261.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033153.2;locus_tag=LU604_RS21675;product=host cell division inhibitor Icd-like protein;protein_id=WP_233479261.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4101143 4101436 . - . ID=gene-LU604_RS21680;Name=LU604_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21680;old_locus_tag=LU604_21680 NZ_CP089942.1 GeneMarkS-2+ CDS 4101143 4101436 . - 0 ID=cds-WP_233479262.1;Parent=gene-LU604_RS21680;Dbxref=Genbank:WP_233479262.1;Name=WP_233479262.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS21680;product=hypothetical protein;protein_id=WP_233479262.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4101947 4102243 . + . ID=gene-LU604_RS21685;Name=LU604_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21685;old_locus_tag=LU604_21685 NZ_CP089942.1 Protein Homology CDS 4101947 4102243 . + 0 ID=cds-WP_233481419.1;Parent=gene-LU604_RS21685;Dbxref=Genbank:WP_233481419.1;Name=WP_233481419.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025478.2;locus_tag=LU604_RS21685;product=T6SS effector amidase Tae4 family protein;protein_id=WP_233481419.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4102240 4102476 . + . ID=gene-LU604_RS21690;Name=LU604_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21690;old_locus_tag=LU604_21690 NZ_CP089942.1 GeneMarkS-2+ CDS 4102240 4102476 . + 0 ID=cds-WP_233479264.1;Parent=gene-LU604_RS21690;Dbxref=Genbank:WP_233479264.1;Name=WP_233479264.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS21690;product=hypothetical protein;protein_id=WP_233479264.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4102933 4103630 . + . ID=gene-LU604_RS21695;Name=LU604_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21695;old_locus_tag=LU604_21695 NZ_CP089942.1 Protein Homology CDS 4102933 4103182 . + 0 ID=cds-WP_233479265.1;Parent=gene-LU604_RS21695;Dbxref=Genbank:WP_233479265.1;Name=WP_233479265.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS21695;product=IS1 family transposase;protein_id=WP_233479265.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 4103182 4103630 . + 2 ID=cds-WP_233479265.1;Parent=gene-LU604_RS21695;Dbxref=Genbank:WP_233479265.1;Name=WP_233479265.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS21695;product=IS1 family transposase;protein_id=WP_233479265.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4103668 4104165 . + . ID=gene-LU604_RS21700;Name=LU604_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21700;old_locus_tag=LU604_21700 NZ_CP089942.1 Protein Homology CDS 4103668 4104165 . + 0 ID=cds-WP_233480864.1;Parent=gene-LU604_RS21700;Dbxref=Genbank:WP_233480864.1;Name=WP_233480864.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=LU604_RS21700;product=tyrosine-type recombinase/integrase;protein_id=WP_233480864.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4104339 4104815 . - . ID=gene-LU604_RS21705;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=LU604_RS21705;old_locus_tag=LU604_21705 NZ_CP089942.1 Protein Homology CDS 4104339 4104815 . - 0 ID=cds-WP_233479266.1;Parent=gene-LU604_RS21705;Dbxref=Genbank:WP_233479266.1;Name=WP_233479266.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462210.1;locus_tag=LU604_RS21705;product=transcription elongation factor GreA;protein_id=WP_233479266.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4105065 4106498 . + . ID=gene-LU604_RS21710;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=LU604_RS21710;old_locus_tag=LU604_21710 NZ_CP089942.1 Protein Homology CDS 4105065 4106498 . + 0 ID=cds-WP_233480865.1;Parent=gene-LU604_RS21710;Dbxref=Genbank:WP_233480865.1;Name=WP_233480865.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720377.1;locus_tag=LU604_RS21710;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_233480865.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4106504 4107166 . + . ID=gene-LU604_RS21715;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=LU604_RS21715;old_locus_tag=LU604_21715 NZ_CP089942.1 Protein Homology CDS 4106504 4107166 . + 0 ID=cds-WP_016190551.1;Parent=gene-LU604_RS21715;Dbxref=Genbank:WP_016190551.1;Name=WP_016190551.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204028.1;locus_tag=LU604_RS21715;product=two-component system response regulator PmrA;protein_id=WP_016190551.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4107163 4107747 . + . ID=gene-LU604_RS21720;Name=LU604_RS21720;end_range=4107747,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21720;old_locus_tag=LU604_21720;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4107163 4107747 . + 0 ID=cds-LU604_RS21720;Parent=gene-LU604_RS21720;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4107747,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227439.1;locus_tag=LU604_RS21720;partial=true;product=two-component sensor histidine kinase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4108177 4109343 . - . ID=gene-LU604_RS21725;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=LU604_RS21725;old_locus_tag=LU604_21725 NZ_CP089942.1 Protein Homology CDS 4108177 4109343 . - 0 ID=cds-WP_233479267.1;Parent=gene-LU604_RS21725;Dbxref=Genbank:WP_233479267.1;Name=WP_233479267.1;Ontology_term=GO:0042254,GO:0005525;gbkey=CDS;gene=cgtA;go_function=GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229032.1;locus_tag=LU604_RS21725;product=Obg family GTPase CgtA;protein_id=WP_233479267.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4109639 4109896 . - . ID=gene-LU604_RS21730;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=LU604_RS21730;old_locus_tag=LU604_21730 NZ_CP089942.1 Protein Homology CDS 4109639 4109896 . - 0 ID=cds-WP_016190554.1;Parent=gene-LU604_RS21730;Dbxref=Genbank:WP_016190554.1;Name=WP_016190554.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=LU604_RS21730;product=50S ribosomal protein L27;protein_id=WP_016190554.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4109912 4110223 . - . ID=gene-LU604_RS21735;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=LU604_RS21735;old_locus_tag=LU604_21735 NZ_CP089942.1 Protein Homology CDS 4109912 4110223 . - 0 ID=cds-WP_233479268.1;Parent=gene-LU604_RS21735;Dbxref=Genbank:WP_233479268.1;Name=WP_233479268.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=LU604_RS21735;product=50S ribosomal protein L21;protein_id=WP_233479268.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4110480 4111451 . + . ID=gene-LU604_RS21740;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=LU604_RS21740;old_locus_tag=LU604_21740 NZ_CP089942.1 Protein Homology CDS 4110480 4111451 . + 0 ID=cds-WP_016190556.1;Parent=gene-LU604_RS21740;Dbxref=Genbank:WP_016190556.1;Name=WP_016190556.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010617356.1;locus_tag=LU604_RS21740;product=octaprenyl diphosphate synthase;protein_id=WP_016190556.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4111522 4112721 . - . ID=gene-LU604_RS21745;Name=LU604_RS21745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21745;old_locus_tag=LU604_21745;pseudo=true NZ_CP089942.1 Protein Homology CDS 4111522 4112721 . - 0 ID=cds-LU604_RS21745;Parent=gene-LU604_RS21745;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU604_RS21745;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4113116 4113376 . + . ID=gene-LU604_RS21750;Name=LU604_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21750;old_locus_tag=LU604_21750 NZ_CP089942.1 Protein Homology CDS 4113116 4113376 . + 0 ID=cds-WP_233479269.1;Parent=gene-LU604_RS21750;Dbxref=Genbank:WP_233479269.1;Name=WP_233479269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148389.1;locus_tag=LU604_RS21750;product=helix-turn-helix domain-containing protein;protein_id=WP_233479269.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4113429 4114691 . - . ID=gene-LU604_RS21755;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=LU604_RS21755;old_locus_tag=LU604_21755 NZ_CP089942.1 Protein Homology CDS 4113429 4114691 . - 0 ID=cds-WP_233479270.1;Parent=gene-LU604_RS21755;Dbxref=Genbank:WP_233479270.1;Name=WP_233479270.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204039.1;locus_tag=LU604_RS21755;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_233479270.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4114750 4115004 . - . ID=gene-LU604_RS21760;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=LU604_RS21760;old_locus_tag=LU604_21760 NZ_CP089942.1 Protein Homology CDS 4114750 4115004 . - 0 ID=cds-WP_016190559.1;Parent=gene-LU604_RS21760;Dbxref=Genbank:WP_016190559.1;Name=WP_016190559.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=LU604_RS21760;product=BolA family iron metabolism protein IbaG;protein_id=WP_016190559.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4115129 4115425 . - . ID=gene-LU604_RS21765;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=LU604_RS21765;old_locus_tag=LU604_21765 NZ_CP089942.1 Protein Homology CDS 4115129 4115425 . - 0 ID=cds-WP_016190560.1;Parent=gene-LU604_RS21765;Dbxref=Genbank:WP_016190560.1;Name=WP_016190560.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155101.1;locus_tag=LU604_RS21765;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_016190560.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4115422 4116060 . - . ID=gene-LU604_RS21770;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=LU604_RS21770;old_locus_tag=LU604_21770 NZ_CP089942.1 Protein Homology CDS 4115422 4116060 . - 0 ID=cds-WP_016190561.1;Parent=gene-LU604_RS21770;Dbxref=Genbank:WP_016190561.1;Name=WP_016190561.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168043.1;locus_tag=LU604_RS21770;product=phospholipid-binding protein MlaC;protein_id=WP_016190561.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4116060 4116620 . - . ID=gene-LU604_RS21775;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=LU604_RS21775;old_locus_tag=LU604_21775 NZ_CP089942.1 Protein Homology CDS 4116060 4116620 . - 0 ID=cds-WP_040465444.1;Parent=gene-LU604_RS21775;Dbxref=Genbank:WP_040465444.1;Name=WP_040465444.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440086.1;locus_tag=LU604_RS21775;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_040465444.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4116625 4117407 . - . ID=gene-LU604_RS21780;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=LU604_RS21780;old_locus_tag=LU604_21780 NZ_CP089942.1 Protein Homology CDS 4116625 4117407 . - 0 ID=cds-WP_233479271.1;Parent=gene-LU604_RS21780;Dbxref=Genbank:WP_233479271.1;Name=WP_233479271.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190563.1;locus_tag=LU604_RS21780;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_233479271.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4117415 4118227 . - . ID=gene-LU604_RS21785;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=LU604_RS21785;old_locus_tag=LU604_21785 NZ_CP089942.1 Protein Homology CDS 4117415 4118227 . - 0 ID=cds-WP_016190564.1;Parent=gene-LU604_RS21785;Dbxref=Genbank:WP_016190564.1;Name=WP_016190564.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017801457.1;locus_tag=LU604_RS21785;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_016190564.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4118453 4119442 . + . ID=gene-LU604_RS21790;Name=LU604_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21790;old_locus_tag=LU604_21790 NZ_CP089942.1 Protein Homology CDS 4118453 4119442 . + 0 ID=cds-WP_233479272.1;Parent=gene-LU604_RS21790;Dbxref=Genbank:WP_233479272.1;Name=WP_233479272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190565.1;locus_tag=LU604_RS21790;product=calcium/sodium antiporter;protein_id=WP_233479272.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4119448 4120434 . + . ID=gene-LU604_RS21795;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=LU604_RS21795;old_locus_tag=LU604_21795 NZ_CP089942.1 Protein Homology CDS 4119448 4120434 . + 0 ID=cds-WP_016190566.1;Parent=gene-LU604_RS21795;Dbxref=Genbank:WP_016190566.1;Name=WP_016190566.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004958137.1;locus_tag=LU604_RS21795;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_016190566.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4120450 4121016 . + . ID=gene-LU604_RS21800;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=LU604_RS21800;old_locus_tag=LU604_21800 NZ_CP089942.1 Protein Homology CDS 4120450 4121016 . + 0 ID=cds-WP_016190567.1;Parent=gene-LU604_RS21800;Dbxref=Genbank:WP_016190567.1;Name=WP_016190567.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204048.1;locus_tag=LU604_RS21800;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_016190567.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4121013 4121588 . + . ID=gene-LU604_RS21805;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=LU604_RS21805;old_locus_tag=LU604_21805 NZ_CP089942.1 Protein Homology CDS 4121013 4121588 . + 0 ID=cds-WP_233479273.1;Parent=gene-LU604_RS21805;Dbxref=Genbank:WP_233479273.1;Name=WP_233479273.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190568.1;locus_tag=LU604_RS21805;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_233479273.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4121560 4122108 . + . ID=gene-LU604_RS21810;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=LU604_RS21810;old_locus_tag=LU604_21810 NZ_CP089942.1 Protein Homology CDS 4121560 4122108 . + 0 ID=cds-WP_016190569.1;Parent=gene-LU604_RS21810;Dbxref=Genbank:WP_016190569.1;Name=WP_016190569.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204050.1;locus_tag=LU604_RS21810;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_016190569.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4122119 4122844 . + . ID=gene-LU604_RS21815;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=LU604_RS21815;old_locus_tag=LU604_21815 NZ_CP089942.1 Protein Homology CDS 4122119 4122844 . + 0 ID=cds-WP_016190570.1;Parent=gene-LU604_RS21815;Dbxref=Genbank:WP_016190570.1;Name=WP_016190570.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=LU604_RS21815;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_016190570.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4122891 4124324 . + . ID=gene-LU604_RS21820;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=LU604_RS21820;old_locus_tag=LU604_21820 NZ_CP089942.1 Protein Homology CDS 4122891 4124324 . + 0 ID=cds-WP_233479274.1;Parent=gene-LU604_RS21820;Dbxref=Genbank:WP_233479274.1;Name=WP_233479274.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312108.1;locus_tag=LU604_RS21820;product=RNA polymerase factor sigma-54;protein_id=WP_233479274.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4124347 4124634 . + . ID=gene-LU604_RS21825;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=LU604_RS21825;old_locus_tag=LU604_21825 NZ_CP089942.1 Protein Homology CDS 4124347 4124634 . + 0 ID=cds-WP_233479275.1;Parent=gene-LU604_RS21825;Dbxref=Genbank:WP_233479275.1;Name=WP_233479275.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312109.1;locus_tag=LU604_RS21825;product=ribosome hibernation promoting factor;protein_id=WP_233479275.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4124832 4125317 . + . ID=gene-LU604_RS21830;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=LU604_RS21830;old_locus_tag=LU604_21830 NZ_CP089942.1 Protein Homology CDS 4124832 4125317 . + 0 ID=cds-WP_233480866.1;Parent=gene-LU604_RS21830;Dbxref=Genbank:WP_233480866.1;Name=WP_233480866.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190573.1;locus_tag=LU604_RS21830;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_233480866.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4126294 4127148 . + . ID=gene-LU604_RS21835;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=LU604_RS21835;old_locus_tag=LU604_21835 NZ_CP089942.1 Protein Homology CDS 4126294 4127148 . + 0 ID=cds-WP_233479276.1;Parent=gene-LU604_RS21835;Dbxref=Genbank:WP_233479276.1;Name=WP_233479276.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229054.1;locus_tag=LU604_RS21835;product=RNase adapter RapZ;protein_id=WP_233479276.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4127145 4127417 . + . ID=gene-LU604_RS21840;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=LU604_RS21840;old_locus_tag=LU604_21840 NZ_CP089942.1 Protein Homology CDS 4127145 4127417 . + 0 ID=cds-WP_233479277.1;Parent=gene-LU604_RS21840;Dbxref=Genbank:WP_233479277.1;Name=WP_233479277.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312112.1;locus_tag=LU604_RS21840;product=PTS phosphocarrier protein NPr;protein_id=WP_233479277.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4127461 4128180 . - . ID=gene-LU604_RS21845;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=LU604_RS21845;old_locus_tag=LU604_21845 NZ_CP089942.1 Protein Homology CDS 4127461 4128180 . - 0 ID=cds-WP_016190576.1;Parent=gene-LU604_RS21845;Dbxref=Genbank:WP_016190576.1;Name=WP_016190576.1;Ontology_term=GO:0009252,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155078.1;locus_tag=LU604_RS21845;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_016190576.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4128980 4131385 . - . ID=gene-LU604_RS21850;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=LU604_RS21850;old_locus_tag=LU604_21850 NZ_CP089942.1 Protein Homology CDS 4128980 4131385 . - 0 ID=cds-WP_233479278.1;Parent=gene-LU604_RS21850;Dbxref=Genbank:WP_233479278.1;Name=WP_233479278.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190577.1;locus_tag=LU604_RS21850;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_233479278.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4132462 4136919 . + . ID=gene-LU604_RS21855;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=LU604_RS21855;old_locus_tag=LU604_21855 NZ_CP089942.1 Protein Homology CDS 4132462 4136919 . + 0 ID=cds-WP_233479279.1;Parent=gene-LU604_RS21855;Dbxref=Genbank:WP_233479279.1;Name=WP_233479279.1;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229064.1;locus_tag=LU604_RS21855;product=glutamate synthase large subunit;protein_id=WP_233479279.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4136929 4138347 . + . ID=gene-LU604_RS21860;Name=LU604_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21860;old_locus_tag=LU604_21860 NZ_CP089942.1 Protein Homology CDS 4136929 4138347 . + 0 ID=cds-WP_016190579.1;Parent=gene-LU604_RS21860;Dbxref=Genbank:WP_016190579.1;Name=WP_016190579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=LU604_RS21860;product=glutamate synthase small subunit;protein_id=WP_016190579.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4138568 4139062 . - . ID=gene-LU604_RS21865;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=LU604_RS21865;old_locus_tag=LU604_21865 NZ_CP089942.1 Protein Homology CDS 4138568 4139062 . - 0 ID=cds-WP_233479280.1;Parent=gene-LU604_RS21865;Dbxref=Genbank:WP_233479280.1;Name=WP_233479280.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229067.1;locus_tag=LU604_RS21865;product=ClpXP protease specificity-enhancing factor;protein_id=WP_233479280.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4139069 4139710 . - . ID=gene-LU604_RS21870;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=LU604_RS21870;old_locus_tag=LU604_21870 NZ_CP089942.1 Protein Homology CDS 4139069 4139710 . - 0 ID=cds-WP_016190581.1;Parent=gene-LU604_RS21870;Dbxref=Genbank:WP_016190581.1;Name=WP_016190581.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005162411.1;locus_tag=LU604_RS21870;product=stringent starvation protein A;protein_id=WP_016190581.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4140019 4140411 . - . ID=gene-LU604_RS21875;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=LU604_RS21875;old_locus_tag=LU604_21875 NZ_CP089942.1 Protein Homology CDS 4140019 4140411 . - 0 ID=cds-WP_016190582.1;Parent=gene-LU604_RS21875;Dbxref=Genbank:WP_016190582.1;Name=WP_016190582.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=LU604_RS21875;product=30S ribosomal protein S9;protein_id=WP_016190582.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4140427 4140855 . - . ID=gene-LU604_RS21880;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=LU604_RS21880;old_locus_tag=LU604_21880 NZ_CP089942.1 Protein Homology CDS 4140427 4140855 . - 0 ID=cds-WP_016190583.1;Parent=gene-LU604_RS21880;Dbxref=Genbank:WP_016190583.1;Name=WP_016190583.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=LU604_RS21880;product=50S ribosomal protein L13;protein_id=WP_016190583.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4141098 4142225 . - . ID=gene-LU604_RS21885;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=LU604_RS21885;old_locus_tag=LU604_21885 NZ_CP089942.1 Protein Homology CDS 4141098 4142225 . - 0 ID=cds-WP_233479281.1;Parent=gene-LU604_RS21885;Dbxref=Genbank:WP_233479281.1;Name=WP_233479281.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155065.1;locus_tag=LU604_RS21885;product=cell division protein ZapE;protein_id=WP_233479281.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4142412 4142816 . + . ID=gene-LU604_RS21890;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=LU604_RS21890;old_locus_tag=LU604_21890 NZ_CP089942.1 Protein Homology CDS 4142412 4142816 . + 0 ID=cds-WP_016190585.1;Parent=gene-LU604_RS21890;Dbxref=Genbank:WP_016190585.1;Name=WP_016190585.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848291.1;locus_tag=LU604_RS21890;product=Z-ring associated protein ZapG;protein_id=WP_016190585.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4142931 4144298 . + . ID=gene-LU604_RS21895;Name=LU604_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21895;old_locus_tag=LU604_21895 NZ_CP089942.1 Protein Homology CDS 4142931 4144298 . + 0 ID=cds-WP_233479282.1;Parent=gene-LU604_RS21895;Dbxref=Genbank:WP_233479282.1;Name=WP_233479282.1;Ontology_term=GO:0006508,GO:0006950,GO:0004252,GO:0005515,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011073684.1;locus_tag=LU604_RS21895;product=Do family serine endopeptidase;protein_id=WP_233479282.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4144375 4145433 . + . ID=gene-LU604_RS21900;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=LU604_RS21900;old_locus_tag=LU604_21900 NZ_CP089942.1 Protein Homology CDS 4144375 4145433 . + 0 ID=cds-WP_016190587.1;Parent=gene-LU604_RS21900;Dbxref=Genbank:WP_016190587.1;Name=WP_016190587.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883511.1;locus_tag=LU604_RS21900;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_016190587.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4145472 4146407 . - . ID=gene-LU604_RS21905;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=LU604_RS21905;old_locus_tag=LU604_21905 NZ_CP089942.1 Protein Homology CDS 4145472 4146407 . - 0 ID=cds-WP_016190588.1;Parent=gene-LU604_RS21905;Dbxref=Genbank:WP_016190588.1;Name=WP_016190588.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004707044.1;locus_tag=LU604_RS21905;product=malate dehydrogenase;protein_id=WP_016190588.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4146823 4147293 . + . ID=gene-LU604_RS21910;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=LU604_RS21910;old_locus_tag=LU604_21910 NZ_CP089942.1 Protein Homology CDS 4146823 4147293 . + 0 ID=cds-WP_016190589.1;Parent=gene-LU604_RS21910;Dbxref=Genbank:WP_016190589.1;Name=WP_016190589.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=LU604_RS21910;product=transcriptional regulator ArgR;protein_id=WP_016190589.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4147700 4147891 . + . ID=gene-LU604_RS21915;Name=LU604_RS21915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21915;old_locus_tag=LU604_21915;partial=true;pseudo=true;start_range=.,4147700 NZ_CP089942.1 Protein Homology CDS 4147700 4147891 . + 0 ID=cds-LU604_RS21915;Parent=gene-LU604_RS21915;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004928.1;locus_tag=LU604_RS21915;partial=true;product=DUF1471 domain-containing protein;pseudo=true;start_range=.,4147700;transl_table=11 NZ_CP089942.1 RefSeq gene 4147971 4148240 . - . ID=gene-LU604_RS21920;Name=LU604_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21920;old_locus_tag=LU604_21920 NZ_CP089942.1 Protein Homology CDS 4147971 4148240 . - 0 ID=cds-WP_016190591.1;Parent=gene-LU604_RS21920;Dbxref=Genbank:WP_016190591.1;Name=WP_016190591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204075.1;locus_tag=LU604_RS21920;product=barnase inhibitor;protein_id=WP_016190591.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4148257 4148430 . - . ID=gene-LU604_RS21925;Name=LU604_RS21925;end_range=4148430,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21925;old_locus_tag=LU604_21925;partial=true;pseudo=true;start_range=.,4148257 NZ_CP089942.1 Protein Homology CDS 4148257 4148430 . - 0 ID=cds-LU604_RS21925;Parent=gene-LU604_RS21925;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016491;end_range=4148430,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693898.1;locus_tag=LU604_RS21925;partial=true;product=aldehyde dehydrogenase family protein;pseudo=true;start_range=.,4148257;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4148484 4149262 . + . ID=gene-LU604_RS21930;Name=LU604_RS21930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21930;old_locus_tag=LU604_21930;partial=true;pseudo=true;start_range=.,4148484 NZ_CP089942.1 Protein Homology CDS 4148484 4149262 . + 0 ID=cds-LU604_RS21930;Parent=gene-LU604_RS21930;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011073373.1;locus_tag=LU604_RS21930;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,4148484;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4149324 4149677 . - . ID=gene-LU604_RS21935;Name=LU604_RS21935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS21935;old_locus_tag=LU604_21935;partial=true;pseudo=true;start_range=.,4149324 NZ_CP089942.1 Protein Homology CDS 4149324 4149677 . - 0 ID=cds-LU604_RS21935;Parent=gene-LU604_RS21935;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359198.1;locus_tag=LU604_RS21935;partial=true;product=aldehyde dehydrogenase family protein;pseudo=true;start_range=.,4149324;transl_table=11 NZ_CP089942.1 RefSeq gene 4149811 4151769 . - . ID=gene-LU604_RS21940;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=LU604_RS21940;old_locus_tag=LU604_21940 NZ_CP089942.1 Protein Homology CDS 4149811 4151769 . - 0 ID=cds-WP_233480867.1;Parent=gene-LU604_RS21940;Dbxref=Genbank:WP_233480867.1;Name=WP_233480867.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155056.1;locus_tag=LU604_RS21940;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_233480867.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4151774 4152706 . - . ID=gene-LU604_RS21945;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=LU604_RS21945;old_locus_tag=LU604_21945 NZ_CP089942.1 Protein Homology CDS 4151774 4152706 . - 0 ID=cds-WP_233479283.1;Parent=gene-LU604_RS21945;Dbxref=Genbank:WP_233479283.1;Name=WP_233479283.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155055.1;locus_tag=LU604_RS21945;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_233479283.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4152714 4152917 . - . ID=gene-LU604_RS21950;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=LU604_RS21950;old_locus_tag=LU604_21950 NZ_CP089942.1 Protein Homology CDS 4152714 4152917 . - 0 ID=cds-WP_016190596.1;Parent=gene-LU604_RS21950;Dbxref=Genbank:WP_016190596.1;Name=WP_016190596.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229082.1;locus_tag=LU604_RS21950;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_016190596.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4153181 4154099 . + . ID=gene-LU604_RS21955;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=pseudogene;locus_tag=LU604_RS21955;old_locus_tag=LU604_21955;pseudo=true NZ_CP089942.1 Protein Homology CDS 4153181 4154099 . + 0 ID=cds-LU604_RS21955;Parent=gene-LU604_RS21955;Note=frameshifted%3B internal stop;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155051.1;locus_tag=LU604_RS21955;product=HTH-type transcriptional activator AaeR;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4154132 4155577 . - . ID=gene-LU604_RS21960;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=LU604_RS21960;old_locus_tag=LU604_21960 NZ_CP089942.1 Protein Homology CDS 4154132 4155577 . - 0 ID=cds-WP_016190599.1;Parent=gene-LU604_RS21960;Dbxref=Genbank:WP_016190599.1;Name=WP_016190599.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=LU604_RS21960;product=metalloprotease TldD;protein_id=WP_016190599.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4155661 4159467 . - . ID=gene-LU604_RS21965;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=LU604_RS21965;old_locus_tag=LU604_21965 NZ_CP089942.1 Protein Homology CDS 4155661 4159467 . - 0 ID=cds-WP_233479284.1;Parent=gene-LU604_RS21965;Dbxref=Genbank:WP_233479284.1;Name=WP_233479284.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155049.1;locus_tag=LU604_RS21965;product=AsmA2 domain-containing protein YhdP;protein_id=WP_233479284.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4159499 4160968 . - . ID=gene-LU604_RS21970;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=LU604_RS21970;old_locus_tag=LU604_21970 NZ_CP089942.1 Protein Homology CDS 4159499 4160968 . - 0 ID=cds-WP_233479285.1;Parent=gene-LU604_RS21970;Dbxref=Genbank:WP_233479285.1;Name=WP_233479285.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,ribonuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=LU604_RS21970;product=ribonuclease G;protein_id=WP_233479285.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4160958 4161554 . - . ID=gene-LU604_RS21975;Name=LU604_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS21975;old_locus_tag=LU604_21975 NZ_CP089942.1 Protein Homology CDS 4160958 4161554 . - 0 ID=cds-WP_233479286.1;Parent=gene-LU604_RS21975;Dbxref=Genbank:WP_233479286.1;Name=WP_233479286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190602.1;locus_tag=LU604_RS21975;product=Maf family protein;protein_id=WP_233479286.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4161563 4162051 . - . ID=gene-LU604_RS21980;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=LU604_RS21980;old_locus_tag=LU604_21980 NZ_CP089942.1 Protein Homology CDS 4161563 4162051 . - 0 ID=cds-WP_016190603.1;Parent=gene-LU604_RS21980;Dbxref=Genbank:WP_016190603.1;Name=WP_016190603.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312148.1;locus_tag=LU604_RS21980;product=rod shape-determining protein MreD;protein_id=WP_016190603.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4162048 4163085 . - . ID=gene-LU604_RS21985;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=LU604_RS21985;old_locus_tag=LU604_21985 NZ_CP089942.1 Protein Homology CDS 4162048 4163085 . - 0 ID=cds-WP_016190604.1;Parent=gene-LU604_RS21985;Dbxref=Genbank:WP_016190604.1;Name=WP_016190604.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594736.1;locus_tag=LU604_RS21985;product=rod shape-determining protein MreC;protein_id=WP_016190604.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4163154 4164197 . - . ID=gene-LU604_RS21990;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=LU604_RS21990;old_locus_tag=LU604_21990 NZ_CP089942.1 Protein Homology CDS 4163154 4164197 . - 0 ID=cds-WP_016190605.1;Parent=gene-LU604_RS21990;Dbxref=Genbank:WP_016190605.1;Name=WP_016190605.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=LU604_RS21990;product=rod shape-determining protein MreB;protein_id=WP_016190605.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4164522 4166471 . - . ID=gene-LU604_RS21995;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=LU604_RS21995;old_locus_tag=LU604_21995 NZ_CP089942.1 Protein Homology CDS 4164522 4166471 . - 0 ID=cds-WP_233479287.1;Parent=gene-LU604_RS21995;Dbxref=Genbank:WP_233479287.1;Name=WP_233479287.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440048.1;locus_tag=LU604_RS21995;product=RNase E specificity factor CsrD;protein_id=WP_233479287.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4166664 4167638 . + . ID=gene-LU604_RS22000;Name=LU604_RS22000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22000;old_locus_tag=LU604_22000;pseudo=true NZ_CP089942.1 Protein Homology CDS 4166664 4167638 . + 0 ID=cds-LU604_RS22000;Parent=gene-LU604_RS22000;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001679638.1;locus_tag=LU604_RS22000;product=oxidoreductase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4167776 4168777 . + . ID=gene-LU604_RS22005;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=LU604_RS22005;old_locus_tag=LU604_22005 NZ_CP089942.1 Protein Homology CDS 4167776 4168777 . + 0 ID=cds-WP_233479288.1;Parent=gene-LU604_RS22005;Dbxref=Genbank:WP_233479288.1;Name=WP_233479288.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013034825.1;locus_tag=LU604_RS22005;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_233479288.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4168777 4169379 . + . ID=gene-LU604_RS22010;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=LU604_RS22010;old_locus_tag=LU604_22010 NZ_CP089942.1 Protein Homology CDS 4168777 4169379 . + 0 ID=cds-WP_016190610.1;Parent=gene-LU604_RS22010;Dbxref=Genbank:WP_016190610.1;Name=WP_016190610.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009634912.1;locus_tag=LU604_RS22010;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_016190610.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4169617 4170069 . + . ID=gene-LU604_RS22015;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=LU604_RS22015;old_locus_tag=LU604_22015 NZ_CP089942.1 Protein Homology CDS 4169617 4170069 . + 0 ID=cds-WP_233479289.1;Parent=gene-LU604_RS22015;Dbxref=Genbank:WP_233479289.1;Name=WP_233479289.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891972.1;locus_tag=LU604_RS22015;product=type II 3-dehydroquinate dehydratase;protein_id=WP_233479289.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4170091 4170564 . + . ID=gene-LU604_RS22020;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=LU604_RS22020;old_locus_tag=LU604_22020 NZ_CP089942.1 Protein Homology CDS 4170091 4170564 . + 0 ID=cds-WP_016190612.1;Parent=gene-LU604_RS22020;Dbxref=Genbank:WP_016190612.1;Name=WP_016190612.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=LU604_RS22020;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_016190612.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4170576 4171925 . + . ID=gene-LU604_RS22025;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=LU604_RS22025;old_locus_tag=LU604_22025 NZ_CP089942.1 Protein Homology CDS 4170576 4171925 . + 0 ID=cds-WP_233479290.1;Parent=gene-LU604_RS22025;Dbxref=Genbank:WP_233479290.1;Name=WP_233479290.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817284.1;locus_tag=LU604_RS22025;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_233479290.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4171995 4172231 . + . ID=gene-LU604_RS22030;Name=LU604_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22030;old_locus_tag=LU604_22030 NZ_CP089942.1 Protein Homology CDS 4171995 4172231 . + 0 ID=cds-WP_016190614.1;Parent=gene-LU604_RS22030;Dbxref=Genbank:WP_016190614.1;Name=WP_016190614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204093.1;locus_tag=LU604_RS22030;product=YhdT family protein;protein_id=WP_016190614.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4172228 4173679 . + . ID=gene-LU604_RS22035;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=LU604_RS22035;old_locus_tag=LU604_22035 NZ_CP089942.1 Protein Homology CDS 4172228 4173679 . + 0 ID=cds-WP_233479291.1;Parent=gene-LU604_RS22035;Dbxref=Genbank:WP_233479291.1;Name=WP_233479291.1;Ontology_term=GO:0015887,GO:0015937,GO:0015498;gbkey=CDS;gene=panF;go_function=pantothenate:sodium symporter activity|0015498||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190615.1;locus_tag=LU604_RS22035;product=sodium/pantothenate symporter;protein_id=WP_233479291.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4173691 4174572 . + . ID=gene-LU604_RS22040;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=LU604_RS22040;old_locus_tag=LU604_22040 NZ_CP089942.1 Protein Homology CDS 4173691 4174572 . + 0 ID=cds-WP_233479292.1;Parent=gene-LU604_RS22040;Dbxref=Genbank:WP_233479292.1;Name=WP_233479292.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001145856.1;locus_tag=LU604_RS22040;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_233479292.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4174709 4175443 . + . ID=gene-LU604_RS22045;Name=LU604_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22045;old_locus_tag=LU604_22045 NZ_CP089942.1 Protein Homology CDS 4174709 4175443 . + 0 ID=cds-WP_016190617.1;Parent=gene-LU604_RS22045;Dbxref=Genbank:WP_016190617.1;Name=WP_016190617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010260554.1;locus_tag=LU604_RS22045;product=carbonic anhydrase family protein;protein_id=WP_016190617.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4175758 4176766 . + . ID=gene-LU604_RS22050;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=pseudogene;locus_tag=LU604_RS22050;old_locus_tag=LU604_22050;pseudo=true NZ_CP089942.1 Protein Homology CDS 4175758 4176766 . + 0 ID=cds-LU604_RS22050;Parent=gene-LU604_RS22050;Note=frameshifted;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936856.1;locus_tag=LU604_RS22050;product=tRNA dihydrouridine synthase DusB;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4176748 4177044 . + . ID=gene-LU604_RS22055;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=LU604_RS22055;old_locus_tag=LU604_22055 NZ_CP089942.1 Protein Homology CDS 4176748 4177044 . + 0 ID=cds-WP_016190619.1;Parent=gene-LU604_RS22055;Dbxref=Genbank:WP_016190619.1;Name=WP_016190619.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=LU604_RS22055;product=DNA-binding transcriptional regulator Fis;protein_id=WP_016190619.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4177203 4178426 . + . ID=gene-LU604_RS22060;Name=LU604_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22060;old_locus_tag=LU604_22060 NZ_CP089942.1 Protein Homology CDS 4177203 4178426 . + 0 ID=cds-WP_233478977.1-5;Parent=gene-LU604_RS22060;Dbxref=Genbank:WP_233478977.1;Name=WP_233478977.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU604_RS22060;product=IS91 family transposase;protein_id=WP_233478977.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4178727 4179113 . + . ID=gene-LU604_RS22065;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS22065;old_locus_tag=LU604_22065;pseudo=true NZ_CP089942.1 Protein Homology CDS 4178727 4179113 . + 0 ID=cds-LU604_RS22065;Parent=gene-LU604_RS22065;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011072537.1;locus_tag=LU604_RS22065;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4179450 4179781 . - . ID=gene-LU604_RS22070;Name=LU604_RS22070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22070;old_locus_tag=LU604_22070;partial=true;pseudo=true;start_range=.,4179450 NZ_CP089942.1 Protein Homology CDS 4179450 4179781 . - 0 ID=cds-LU604_RS22070;Parent=gene-LU604_RS22070;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077814.1;locus_tag=LU604_RS22070;partial=true;product=terminase large subunit;pseudo=true;start_range=.,4179450;transl_table=11 NZ_CP089942.1 RefSeq gene 4180018 4180293 . - . ID=gene-LU604_RS22075;Name=LU604_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22075;old_locus_tag=LU604_22075 NZ_CP089942.1 Protein Homology CDS 4180018 4180293 . - 0 ID=cds-WP_016190621.1;Parent=gene-LU604_RS22075;Dbxref=Genbank:WP_016190621.1;Name=WP_016190621.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019023.2;locus_tag=LU604_RS22075;product=DUF1493 family protein;protein_id=WP_016190621.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4180495 4180893 . + . ID=gene-LU604_RS22080;Name=LU604_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22080;old_locus_tag=LU604_22080 NZ_CP089942.1 Protein Homology CDS 4180495 4180893 . + 0 ID=cds-WP_071598878.1;Parent=gene-LU604_RS22080;Dbxref=Genbank:WP_071598878.1;Name=WP_071598878.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS22080;product=transposase;protein_id=WP_071598878.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4180936 4181160 . + . ID=gene-LU604_RS22085;Name=LU604_RS22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22085;old_locus_tag=LU604_22085 NZ_CP089942.1 Protein Homology CDS 4180936 4181160 . + 0 ID=cds-WP_233479293.1;Parent=gene-LU604_RS22085;Dbxref=Genbank:WP_233479293.1;Name=WP_233479293.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS22085;product=transposase;protein_id=WP_233479293.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4181962 4182135 . - . ID=gene-LU604_RS22090;Name=LU604_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22090;old_locus_tag=LU604_22090 NZ_CP089942.1 GeneMarkS-2+ CDS 4181962 4182135 . - 0 ID=cds-WP_233479294.1;Parent=gene-LU604_RS22090;Dbxref=Genbank:WP_233479294.1;Name=WP_233479294.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS22090;product=hypothetical protein;protein_id=WP_233479294.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4182413 4187452 . + . ID=gene-LU604_RS22095;Name=LU604_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22095;old_locus_tag=LU604_22095 NZ_CP089942.1 GeneMarkS-2+ CDS 4182413 4187452 . + 0 ID=cds-WP_233479295.1;Parent=gene-LU604_RS22095;Dbxref=Genbank:WP_233479295.1;Name=WP_233479295.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS22095;product=hypothetical protein;protein_id=WP_233479295.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4188439 4189107 . + . ID=gene-LU604_RS22100;Name=LU604_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22100;old_locus_tag=LU604_22100 NZ_CP089942.1 Protein Homology CDS 4188439 4189107 . + 0 ID=cds-WP_071598880.1;Parent=gene-LU604_RS22100;Dbxref=Genbank:WP_071598880.1;Name=WP_071598880.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016242.2;locus_tag=LU604_RS22100;product=peptidogalycan biosysnthesis protein;protein_id=WP_071598880.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4189230 4189463 . + . ID=gene-LU604_RS22105;Name=LU604_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22105;old_locus_tag=LU604_22105 NZ_CP089942.1 GeneMarkS-2+ CDS 4189230 4189463 . + 0 ID=cds-WP_232426833.1;Parent=gene-LU604_RS22105;Dbxref=Genbank:WP_232426833.1;Name=WP_232426833.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS22105;product=hypothetical protein;protein_id=WP_232426833.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4189465 4189989 . + . ID=gene-LU604_RS22110;Name=LU604_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22110;old_locus_tag=LU604_22110 NZ_CP089942.1 Protein Homology CDS 4189465 4189989 . + 0 ID=cds-WP_016190625.1;Parent=gene-LU604_RS22110;Dbxref=Genbank:WP_016190625.1;Name=WP_016190625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012988025.1;locus_tag=LU604_RS22110;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_016190625.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4190126 4190496 . + . ID=gene-LU604_RS22115;Name=LU604_RS22115;end_range=4190496,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22115;old_locus_tag=LU604_22115;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4190126 4190496 . + 0 ID=cds-LU604_RS22115;Parent=gene-LU604_RS22115;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4190496,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=LU604_RS22115;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4190541 4190822 . + . ID=gene-LU604_RS22120;Name=LU604_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22120;old_locus_tag=LU604_22120 NZ_CP089942.1 Protein Homology CDS 4190541 4190822 . + 0 ID=cds-WP_016190628.1;Parent=gene-LU604_RS22120;Dbxref=Genbank:WP_016190628.1;Name=WP_016190628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001694627.1;locus_tag=LU604_RS22120;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_016190628.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4190875 4191363 . - . ID=gene-LU604_RS22125;Name=traF;gbkey=Gene;gene=traF;gene_biotype=pseudogene;locus_tag=LU604_RS22125;old_locus_tag=LU604_22125;pseudo=true NZ_CP089942.1 Protein Homology CDS 4190875 4191363 . - 0 ID=cds-LU604_RS22125;Parent=gene-LU604_RS22125;Note=internal stop;gbkey=CDS;gene=traF;inference=COORDINATES: protein motif:HMM:NF025105.2;locus_tag=LU604_RS22125;product=conjugal transfer protein TraF;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4191637 4191980 . - . ID=gene-LU604_RS22130;Name=traN;end_range=4191980,.;gbkey=Gene;gene=traN;gene_biotype=pseudogene;locus_tag=LU604_RS22130;old_locus_tag=LU604_22130;partial=true;pseudo=true;start_range=.,4191637 NZ_CP089942.1 Protein Homology CDS 4191637 4191980 . - 0 ID=cds-LU604_RS22130;Parent=gene-LU604_RS22130;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4191980,.;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000833260.1;locus_tag=LU604_RS22130;partial=true;product=conjugal transfer protein TraN;pseudo=true;start_range=.,4191637;transl_table=11 NZ_CP089942.1 RefSeq gene 4192166 4192423 . + . ID=gene-LU604_RS22135;Name=LU604_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22135;old_locus_tag=LU604_22135 NZ_CP089942.1 GeneMarkS-2+ CDS 4192166 4192423 . + 0 ID=cds-WP_233479296.1;Parent=gene-LU604_RS22135;Dbxref=Genbank:WP_233479296.1;Name=WP_233479296.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS22135;product=hypothetical protein;protein_id=WP_233479296.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4192451 4192762 . + . ID=gene-LU604_RS22140;Name=LU604_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22140;old_locus_tag=LU604_22140 NZ_CP089942.1 GeneMarkS-2+ CDS 4192451 4192762 . + 0 ID=cds-WP_016190632.1;Parent=gene-LU604_RS22140;Dbxref=Genbank:WP_016190632.1;Name=WP_016190632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS22140;product=hypothetical protein;protein_id=WP_016190632.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4193998 4194336 . - . ID=gene-LU604_RS22145;Name=LU604_RS22145;end_range=4194336,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22145;old_locus_tag=LU604_22145;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4193998 4194336 . - 0 ID=cds-LU604_RS22145;Parent=gene-LU604_RS22145;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4194336,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122290.1;locus_tag=LU604_RS22145;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4194343 4195507 . - . ID=gene-LU604_RS22150;Name=LU604_RS22150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22150;old_locus_tag=LU604_22150;pseudo=true NZ_CP089942.1 Protein Homology CDS 4194343 4195507 . - 0 ID=cds-LU604_RS22150;Parent=gene-LU604_RS22150;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612263.1;locus_tag=LU604_RS22150;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4195578 4195751 . - . ID=gene-LU604_RS22155;Name=LU604_RS22155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22155;old_locus_tag=LU604_22155;partial=true;pseudo=true;start_range=.,4195578 NZ_CP089942.1 Protein Homology CDS 4195578 4195751 . - 0 ID=cds-LU604_RS22155;Parent=gene-LU604_RS22155;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=LU604_RS22155;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,4195578;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4195845 4196447 . - . ID=gene-LU604_RS22160;Name=LU604_RS22160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22160;old_locus_tag=LU604_22160;pseudo=true NZ_CP089942.1 Protein Homology CDS 4195845 4196447 . - 0 ID=cds-LU604_RS22160;Parent=gene-LU604_RS22160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593759.1;locus_tag=LU604_RS22160;product=acyl-homoserine-lactone synthase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4196673 4196870 . + . ID=gene-LU604_RS22165;Name=LU604_RS22165;end_range=4196870,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22165;old_locus_tag=LU604_22165;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4196673 4196870 . + 0 ID=cds-LU604_RS22165;Parent=gene-LU604_RS22165;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4196870,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=LU604_RS22165;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4197021 4197445 . - . ID=gene-LU604_RS22170;Name=LU604_RS22170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22170;old_locus_tag=LU604_22170;partial=true;pseudo=true;start_range=.,4197021 NZ_CP089942.1 Protein Homology CDS 4197021 4197445 . - 0 ID=cds-LU604_RS22170;Parent=gene-LU604_RS22170;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS22170;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,4197021;transl_table=11 NZ_CP089942.1 RefSeq gene 4197947 4199098 . - . ID=gene-LU604_RS22175;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=LU604_RS22175;old_locus_tag=LU604_22175 NZ_CP089942.1 Protein Homology CDS 4197947 4199098 . - 0 ID=cds-WP_233479297.1;Parent=gene-LU604_RS22175;Dbxref=Genbank:WP_233479297.1;Name=WP_233479297.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104888.1;locus_tag=LU604_RS22175;product=lactaldehyde reductase;protein_id=WP_233479297.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4199336 4199839 . - . ID=gene-LU604_RS22180;Name=LU604_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22180;old_locus_tag=LU604_22180 NZ_CP089942.1 Protein Homology CDS 4199336 4199839 . - 0 ID=cds-WP_233479298.1;Parent=gene-LU604_RS22180;Dbxref=Genbank:WP_233479298.1;Name=WP_233479298.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU604_RS22180;product=IS1 family transposase;protein_id=WP_233479298.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4199758 4200033 . - . ID=gene-LU604_RS22185;Name=LU604_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22185;old_locus_tag=LU604_22185 NZ_CP089942.1 Protein Homology CDS 4199758 4200033 . - 0 ID=cds-WP_016192850.1-3;Parent=gene-LU604_RS22185;Dbxref=Genbank:WP_016192850.1;Name=WP_016192850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU604_RS22185;product=transposase;protein_id=WP_016192850.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4200126 4200479 . - . ID=gene-LU604_RS22190;Name=LU604_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22190;old_locus_tag=LU604_22190 NZ_CP089942.1 GeneMarkS-2+ CDS 4200126 4200479 . - 0 ID=cds-WP_016190638.1;Parent=gene-LU604_RS22190;Dbxref=Genbank:WP_016190638.1;Name=WP_016190638.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS22190;product=hypothetical protein;protein_id=WP_016190638.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4200466 4201113 . - . ID=gene-LU604_RS22195;Name=LU604_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22195;old_locus_tag=LU604_22195 NZ_CP089942.1 Protein Homology CDS 4200466 4201113 . - 0 ID=cds-WP_016190639.1;Parent=gene-LU604_RS22195;Dbxref=Genbank:WP_016190639.1;Name=WP_016190639.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028064.2;locus_tag=LU604_RS22195;product=pesticin C-terminus-like muramidase;protein_id=WP_016190639.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4201595 4201720 . + . ID=gene-LU604_RS27075;Name=LU604_RS27075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27075 NZ_CP089942.1 GeneMarkS-2+ CDS 4201595 4201720 . + 0 ID=cds-WP_256371738.1;Parent=gene-LU604_RS27075;Dbxref=Genbank:WP_256371738.1;Name=WP_256371738.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS27075;product=hypothetical protein;protein_id=WP_256371738.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4201717 4202910 . - . ID=gene-LU604_RS22200;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=LU604_RS22200;old_locus_tag=LU604_22200 NZ_CP089942.1 Protein Homology CDS 4201717 4202910 . - 0 ID=cds-WP_233479299.1;Parent=gene-LU604_RS22200;Dbxref=Genbank:WP_233479299.1;Name=WP_233479299.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190641.1;locus_tag=LU604_RS22200;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_233479299.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4203230 4204783 . - . ID=gene-LU604_RS22205;Name=LU604_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22205;old_locus_tag=LU604_22205 NZ_CP089942.1 Protein Homology CDS 4203230 4204783 . - 0 ID=cds-WP_016190642.1;Parent=gene-LU604_RS22205;Dbxref=Genbank:WP_016190642.1;Name=WP_016190642.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203908.1;locus_tag=LU604_RS22205;product=methyl-accepting chemotaxis protein;protein_id=WP_016190642.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4205064 4207367 . - . ID=gene-LU604_RS22210;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=LU604_RS22210;old_locus_tag=LU604_22210 NZ_CP089942.1 Protein Homology CDS 4205064 4207367 . - 0 ID=cds-WP_233479300.1;Parent=gene-LU604_RS22210;Dbxref=Genbank:WP_233479300.1;Name=WP_233479300.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666786.1;locus_tag=LU604_RS22210;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_233479300.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4207321 4207572 . + . ID=gene-LU604_RS22215;Name=LU604_RS22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22215;old_locus_tag=LU604_22215 NZ_CP089942.1 GeneMarkS-2+ CDS 4207321 4207572 . + 0 ID=cds-WP_016190644.1;Parent=gene-LU604_RS22215;Dbxref=Genbank:WP_016190644.1;Name=WP_016190644.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS22215;product=hypothetical protein;protein_id=WP_016190644.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4207770 4208466 . - . ID=gene-LU604_RS22220;Name=LU604_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22220;old_locus_tag=LU604_22220 NZ_CP089942.1 Protein Homology CDS 4208213 4208466 . - 0 ID=cds-WP_233479301.1;Parent=gene-LU604_RS22220;Dbxref=Genbank:WP_233479301.1;Name=WP_233479301.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU604_RS22220;product=IS1 family transposase;protein_id=WP_233479301.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 4207770 4208214 . - 1 ID=cds-WP_233479301.1;Parent=gene-LU604_RS22220;Dbxref=Genbank:WP_233479301.1;Name=WP_233479301.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=LU604_RS22220;product=IS1 family transposase;protein_id=WP_233479301.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4208572 4208925 . + . ID=gene-LU604_RS22225;Name=LU604_RS22225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22225;old_locus_tag=LU604_22225;partial=true;pseudo=true;start_range=.,4208572 NZ_CP089942.1 Protein Homology CDS 4208572 4208925 . + 0 ID=cds-LU604_RS22225;Parent=gene-LU604_RS22225;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612091.1;locus_tag=LU604_RS22225;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,4208572;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4209070 4209880 . - . ID=gene-LU604_RS22230;Name=LU604_RS22230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22230;old_locus_tag=LU604_22230;pseudo=true NZ_CP089942.1 Protein Homology CDS 4209070 4209880 . - 0 ID=cds-LU604_RS22230;Parent=gene-LU604_RS22230;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS22230;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4210794 4211072 . - . ID=gene-LU604_RS22235;Name=LU604_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22235;old_locus_tag=LU604_22235 NZ_CP089942.1 GeneMarkS-2+ CDS 4210794 4211072 . - 0 ID=cds-WP_016190649.1;Parent=gene-LU604_RS22235;Dbxref=Genbank:WP_016190649.1;Name=WP_016190649.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS22235;product=hypothetical protein;protein_id=WP_016190649.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4211347 4211967 . - . ID=gene-LU604_RS22240;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=LU604_RS22240;old_locus_tag=LU604_22240 NZ_CP089942.1 Protein Homology CDS 4211347 4211967 . - 0 ID=cds-WP_233479302.1;Parent=gene-LU604_RS22240;Dbxref=Genbank:WP_233479302.1;Name=WP_233479302.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=LU604_RS22240;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_233479302.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4212268 4212822 . + . ID=gene-LU604_RS22245;Name=LU604_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22245;old_locus_tag=LU604_22245 NZ_CP089942.1 Protein Homology CDS 4212268 4212822 . + 0 ID=cds-WP_233479303.1;Parent=gene-LU604_RS22245;Dbxref=Genbank:WP_233479303.1;Name=WP_233479303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160098.1;locus_tag=LU604_RS22245;product=Opacity-associated protein A;protein_id=WP_233479303.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4212914 4213366 . - . ID=gene-LU604_RS22250;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=LU604_RS22250;old_locus_tag=LU604_22250 NZ_CP089942.1 Protein Homology CDS 4212914 4213366 . - 0 ID=cds-WP_016190652.1;Parent=gene-LU604_RS22250;Dbxref=Genbank:WP_016190652.1;Name=WP_016190652.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148644.1;locus_tag=LU604_RS22250;product=50S ribosomal protein L9;protein_id=WP_016190652.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4213404 4213631 . - . ID=gene-LU604_RS22255;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=LU604_RS22255;old_locus_tag=LU604_22255 NZ_CP089942.1 Protein Homology CDS 4213404 4213631 . - 0 ID=cds-WP_000135199.1;Parent=gene-LU604_RS22255;Dbxref=Genbank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=LU604_RS22255;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4213636 4213953 . - . ID=gene-LU604_RS22260;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=LU604_RS22260;old_locus_tag=LU604_22260 NZ_CP089942.1 Protein Homology CDS 4213636 4213953 . - 0 ID=cds-WP_020322694.1;Parent=gene-LU604_RS22260;Dbxref=Genbank:WP_020322694.1;Name=WP_020322694.1;Ontology_term=GO:0006269,GO:0003697;gbkey=CDS;gene=priB;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666877.1;locus_tag=LU604_RS22260;product=primosomal replication protein N;protein_id=WP_020322694.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4213960 4214352 . - . ID=gene-LU604_RS22265;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=LU604_RS22265;old_locus_tag=LU604_22265 NZ_CP089942.1 Protein Homology CDS 4213960 4214352 . - 0 ID=cds-WP_020322695.1;Parent=gene-LU604_RS22265;Dbxref=Genbank:WP_020322695.1;Name=WP_020322695.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=LU604_RS22265;product=30S ribosomal protein S6;protein_id=WP_020322695.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4214574 4215323 . - . ID=gene-LU604_RS22270;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=LU604_RS22270;old_locus_tag=LU604_22270 NZ_CP089942.1 Protein Homology CDS 4214574 4215323 . - 0 ID=cds-WP_233479304.1;Parent=gene-LU604_RS22270;Dbxref=Genbank:WP_233479304.1;Name=WP_233479304.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120929.1;locus_tag=LU604_RS22270;product=esterase;protein_id=WP_233479304.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4215836 4216414 . + . ID=gene-LU604_RS22275;Name=LU604_RS22275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22275;old_locus_tag=LU604_22275;pseudo=true NZ_CP089942.1 Protein Homology CDS 4215836 4216414 . + 0 ID=cds-LU604_RS22275;Parent=gene-LU604_RS22275;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028510.2;locus_tag=LU604_RS22275;product=Cache 3/Cache 2 fusion domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4216420 4216614 . + . ID=gene-LU604_RS22280;Name=LU604_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22280;old_locus_tag=LU604_22280 NZ_CP089942.1 GeneMarkS-2+ CDS 4216420 4216614 . + 0 ID=cds-WP_233479305.1;Parent=gene-LU604_RS22280;Dbxref=Genbank:WP_233479305.1;Name=WP_233479305.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS22280;product=hypothetical protein;protein_id=WP_233479305.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4216623 4217357 . - . ID=gene-LU604_RS22285;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=LU604_RS22285;old_locus_tag=LU604_22285 NZ_CP089942.1 Protein Homology CDS 4216623 4217357 . - 0 ID=cds-WP_020322703.1;Parent=gene-LU604_RS22285;Dbxref=Genbank:WP_020322703.1;Name=WP_020322703.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359175.1;locus_tag=LU604_RS22285;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_020322703.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4217373 4219829 . - . ID=gene-LU604_RS22290;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=LU604_RS22290;old_locus_tag=LU604_22290 NZ_CP089942.1 Protein Homology CDS 4217373 4219829 . - 0 ID=cds-WP_020322704.1;Parent=gene-LU604_RS22290;Dbxref=Genbank:WP_020322704.1;Name=WP_020322704.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=ribonuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160121.1;locus_tag=LU604_RS22290;product=ribonuclease R;protein_id=WP_020322704.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4220361 4221659 . - . ID=gene-LU604_RS22295;Name=LU604_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22295;old_locus_tag=LU604_22295 NZ_CP089942.1 Protein Homology CDS 4220361 4221659 . - 0 ID=cds-WP_020322705.1;Parent=gene-LU604_RS22295;Dbxref=Genbank:WP_020322705.1;Name=WP_020322705.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=LU604_RS22295;product=adenylosuccinate synthase;protein_id=WP_020322705.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4221785 4221988 . - . ID=gene-LU604_RS22300;Name=LU604_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22300;old_locus_tag=LU604_22300 NZ_CP089942.1 Protein Homology CDS 4221785 4221988 . - 0 ID=cds-WP_020322706.1;Parent=gene-LU604_RS22300;Dbxref=Genbank:WP_020322706.1;Name=WP_020322706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014701555.1;locus_tag=LU604_RS22300;product=DUF2065 domain-containing protein;protein_id=WP_020322706.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4222482 4222775 . + . ID=gene-LU604_RS22305;Name=LU604_RS22305;end_range=4222775,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22305;old_locus_tag=LU604_22305;partial=true;pseudo=true;start_range=.,4222482 NZ_CP089942.1 Protein Homology CDS 4222482 4222775 . + 0 ID=cds-LU604_RS22305;Parent=gene-LU604_RS22305;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4222775,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004150955.1;locus_tag=LU604_RS22305;partial=true;product=terminase large subunit;pseudo=true;start_range=.,4222482;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4222773 4222919 . - . ID=gene-LU604_RS22310;Name=LU604_RS22310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22310;old_locus_tag=LU604_22310;partial=true;pseudo=true;start_range=.,4222773 NZ_CP089942.1 Protein Homology CDS 4222773 4222919 . - 0 ID=cds-LU604_RS22310;Parent=gene-LU604_RS22310;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077814.1;locus_tag=LU604_RS22310;partial=true;product=phage major capsid protein;pseudo=true;start_range=.,4222773;transl_table=11 NZ_CP089942.1 RefSeq gene 4223196 4223522 . - . ID=gene-LU604_RS22315;Name=LU604_RS22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22315;old_locus_tag=LU604_22315 NZ_CP089942.1 Protein Homology CDS 4223196 4223522 . - 0 ID=cds-WP_020322708.1;Parent=gene-LU604_RS22315;Dbxref=Genbank:WP_020322708.1;Name=WP_020322708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007763609.1;locus_tag=LU604_RS22315;product=DUF1493 family protein;protein_id=WP_020322708.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4223516 4223758 . - . ID=gene-LU604_RS22320;Name=LU604_RS22320;end_range=4223758,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22320;old_locus_tag=LU604_22320;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4223516 4223758 . - 0 ID=cds-LU604_RS22320;Parent=gene-LU604_RS22320;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4223758,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078279.1;locus_tag=LU604_RS22320;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4223810 4224196 . + . ID=gene-LU604_RS22325;Name=LU604_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22325;old_locus_tag=LU604_22325 NZ_CP089942.1 GeneMarkS-2+ CDS 4223810 4224196 . + 0 ID=cds-WP_233479306.1;Parent=gene-LU604_RS22325;Dbxref=Genbank:WP_233479306.1;Name=WP_233479306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS22325;product=hypothetical protein;protein_id=WP_233479306.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4224899 4225087 . + . ID=gene-LU604_RS22330;Name=LU604_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22330;old_locus_tag=LU604_22330 NZ_CP089942.1 Protein Homology CDS 4224899 4225087 . + 0 ID=cds-WP_020322936.1;Parent=gene-LU604_RS22330;Dbxref=Genbank:WP_020322936.1;Name=WP_020322936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192885.1;locus_tag=LU604_RS22330;product=hypothetical protein;protein_id=WP_020322936.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4225096 4226296 . + . ID=gene-LU604_RS22335;Name=LU604_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22335;old_locus_tag=LU604_22335 NZ_CP089942.1 Protein Homology CDS 4225096 4225923 . + 0 ID=cds-WP_233479307.1;Parent=gene-LU604_RS22335;Dbxref=Genbank:WP_233479307.1;Name=WP_233479307.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS22335;product=IS91 family transposase;protein_id=WP_233479307.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 4225925 4226296 . + 0 ID=cds-WP_233479307.1;Parent=gene-LU604_RS22335;Dbxref=Genbank:WP_233479307.1;Name=WP_233479307.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS22335;product=IS91 family transposase;protein_id=WP_233479307.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4226586 4226759 . + . ID=gene-LU604_RS22340;Name=LU604_RS22340;end_range=4226759,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22340;old_locus_tag=LU604_22340;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4226586 4226759 . + 0 ID=cds-LU604_RS22340;Parent=gene-LU604_RS22340;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4226759,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707455.1;locus_tag=LU604_RS22340;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4226754 4227933 . + . ID=gene-LU604_RS22345;Name=LU604_RS22345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22345;old_locus_tag=LU604_22345;pseudo=true NZ_CP089942.1 Protein Homology CDS 4226754 4227933 . + 0 ID=cds-LU604_RS22345;Parent=gene-LU604_RS22345;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS22345;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4228118 4228426 . + . ID=gene-LU604_RS22350;Name=LU604_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22350;old_locus_tag=LU604_22350 NZ_CP089942.1 Protein Homology CDS 4228118 4228426 . + 0 ID=cds-WP_233479308.1;Parent=gene-LU604_RS22350;Dbxref=Genbank:WP_233479308.1;Name=WP_233479308.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF014609.2;locus_tag=LU604_RS22350;product=PhzF family phenazine biosynthesis protein;protein_id=WP_233479308.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4228509 4229522 . + . ID=gene-LU604_RS22355;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=LU604_RS22355;old_locus_tag=LU604_22355 NZ_CP089942.1 Protein Homology CDS 4228509 4229522 . + 0 ID=cds-WP_016191281.1;Parent=gene-LU604_RS22355;Dbxref=Genbank:WP_016191281.1;Name=WP_016191281.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666499.1;locus_tag=LU604_RS22355;product=inner membrane protein YhjD;protein_id=WP_016191281.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4229517 4230275 . - . ID=gene-LU604_RS22360;Name=LU604_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22360;old_locus_tag=LU604_22360 NZ_CP089942.1 Protein Homology CDS 4229517 4230275 . - 0 ID=cds-WP_233479309.1;Parent=gene-LU604_RS22360;Dbxref=Genbank:WP_233479309.1;Name=WP_233479309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191282.1;locus_tag=LU604_RS22360;product=CDP-diacylglycerol diphosphatase;protein_id=WP_233479309.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4230361 4231213 . - . ID=gene-LU604_RS22365;Name=LU604_RS22365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22365;old_locus_tag=LU604_22365;pseudo=true NZ_CP089942.1 Protein Homology CDS 4230361 4231213 . - 0 ID=cds-LU604_RS22365;Parent=gene-LU604_RS22365;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS22365;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4231319 4232311 . - . ID=gene-LU604_RS22370;Name=LU604_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22370;old_locus_tag=LU604_22370 NZ_CP089942.1 Protein Homology CDS 4231319 4232311 . - 0 ID=cds-WP_233479310.1;Parent=gene-LU604_RS22370;Dbxref=Genbank:WP_233479310.1;Name=WP_233479310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229474.1;locus_tag=LU604_RS22370;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_233479310.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4232525 4232935 . - . ID=gene-LU604_RS22375;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LU604_RS22375;old_locus_tag=LU604_22375 NZ_CP089942.1 Protein Homology CDS 4232525 4232935 . - 0 ID=cds-WP_233479311.1;Parent=gene-LU604_RS22375;Dbxref=Genbank:WP_233479311.1;Name=WP_233479311.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU604_RS22375;product=IS200/IS605 family transposase;protein_id=WP_233479311.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4233089 4234051 . - . ID=gene-LU604_RS22380;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=LU604_RS22380;old_locus_tag=LU604_22380 NZ_CP089942.1 Protein Homology CDS 4233089 4234051 . - 0 ID=cds-WP_016191285.1;Parent=gene-LU604_RS22380;Dbxref=Genbank:WP_016191285.1;Name=WP_016191285.1;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=LU604_RS22380;product=6-phosphofructokinase;protein_id=WP_016191285.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4234264 4235157 . - . ID=gene-LU604_RS22385;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=LU604_RS22385;old_locus_tag=LU604_22385 NZ_CP089942.1 Protein Homology CDS 4234264 4235157 . - 0 ID=cds-WP_233479312.1;Parent=gene-LU604_RS22385;Dbxref=Genbank:WP_233479312.1;Name=WP_233479312.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191286.1;locus_tag=LU604_RS22385;product=CDF family cation-efflux transporter FieF;protein_id=WP_233479312.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4235485 4235985 . - . ID=gene-LU604_RS22390;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=LU604_RS22390;old_locus_tag=LU604_22390 NZ_CP089942.1 Protein Homology CDS 4235485 4235985 . - 0 ID=cds-WP_233479313.1;Parent=gene-LU604_RS22390;Dbxref=Genbank:WP_233479313.1;Name=WP_233479313.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191288.1;locus_tag=LU604_RS22390;product=cell-envelope stress modulator CpxP;protein_id=WP_233479313.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4236137 4236832 . + . ID=gene-LU604_RS22395;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=LU604_RS22395;old_locus_tag=LU604_22395 NZ_CP089942.1 Protein Homology CDS 4236137 4236832 . + 0 ID=cds-WP_016191289.1;Parent=gene-LU604_RS22395;Dbxref=Genbank:WP_016191289.1;Name=WP_016191289.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312865.1;locus_tag=LU604_RS22395;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_016191289.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4236829 4238205 . + . ID=gene-LU604_RS22400;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=LU604_RS22400;old_locus_tag=LU604_22400 NZ_CP089942.1 Protein Homology CDS 4236829 4238205 . + 0 ID=cds-WP_016191290.1;Parent=gene-LU604_RS22400;Dbxref=Genbank:WP_016191290.1;Name=WP_016191290.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200128.1;locus_tag=LU604_RS22400;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_016191290.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4238248 4238724 . + . ID=gene-LU604_RS22405;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=LU604_RS22405;old_locus_tag=LU604_22405 NZ_CP089942.1 Protein Homology CDS 4238248 4238724 . + 0 ID=cds-WP_016191291.1;Parent=gene-LU604_RS22405;Dbxref=Genbank:WP_016191291.1;Name=WP_016191291.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094923.1;locus_tag=LU604_RS22405;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_016191291.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4238721 4239542 . - . ID=gene-LU604_RS22410;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=LU604_RS22410;old_locus_tag=LU604_22410 NZ_CP089942.1 Protein Homology CDS 4238721 4239542 . - 0 ID=cds-WP_233479314.1;Parent=gene-LU604_RS22410;Dbxref=Genbank:WP_233479314.1;Name=WP_233479314.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=LU604_RS22410;product=serine O-acetyltransferase;protein_id=WP_233479314.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4239608 4240627 . - . ID=gene-LU604_RS22415;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=LU604_RS22415;old_locus_tag=LU604_22415 NZ_CP089942.1 Protein Homology CDS 4239608 4240627 . - 0 ID=cds-WP_233479315.1;Parent=gene-LU604_RS22415;Dbxref=Genbank:WP_233479315.1;Name=WP_233479315.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167822.1;locus_tag=LU604_RS22415;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_233479315.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4240627 4241094 . - . ID=gene-LU604_RS22420;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=LU604_RS22420;old_locus_tag=LU604_22420 NZ_CP089942.1 Protein Homology CDS 4240627 4241094 . - 0 ID=cds-WP_016191294.1;Parent=gene-LU604_RS22420;Dbxref=Genbank:WP_016191294.1;Name=WP_016191294.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462601.1;locus_tag=LU604_RS22420;product=protein-export chaperone SecB;protein_id=WP_016191294.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4241137 4241388 . - . ID=gene-LU604_RS22425;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=LU604_RS22425;old_locus_tag=LU604_22425 NZ_CP089942.1 Protein Homology CDS 4241137 4241388 . - 0 ID=cds-WP_233479316.1;Parent=gene-LU604_RS22425;Dbxref=Genbank:WP_233479316.1;Name=WP_233479316.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191295.1;locus_tag=LU604_RS22425;product=glutaredoxin 3;protein_id=WP_233479316.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4241407 4241838 . - . ID=gene-LU604_RS22430;Name=LU604_RS22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22430;old_locus_tag=LU604_22430 NZ_CP089942.1 Protein Homology CDS 4241407 4241838 . - 0 ID=cds-WP_233479317.1;Parent=gene-LU604_RS22430;Dbxref=Genbank:WP_233479317.1;Name=WP_233479317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511012.1;locus_tag=LU604_RS22430;product=rhodanese-like domain-containing protein;protein_id=WP_233479317.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4242160 4243464 . + . ID=gene-LU604_RS22435;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=LU604_RS22435;old_locus_tag=LU604_22435 NZ_CP089942.1 Protein Homology CDS 4242160 4243464 . + 0 ID=cds-WP_233479318.1;Parent=gene-LU604_RS22435;Dbxref=Genbank:WP_233479318.1;Name=WP_233479318.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007885324.1;locus_tag=LU604_RS22435;product=murein hydrolase activator EnvC;protein_id=WP_233479318.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4243467 4244402 . + . ID=gene-LU604_RS22440;Name=LU604_RS22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22440;old_locus_tag=LU604_22440 NZ_CP089942.1 Protein Homology CDS 4243467 4244402 . + 0 ID=cds-WP_233479319.1;Parent=gene-LU604_RS22440;Dbxref=Genbank:WP_233479319.1;Name=WP_233479319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191298.1;locus_tag=LU604_RS22440;product=divergent polysaccharide deacetylase family protein;protein_id=WP_233479319.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4244454 4245628 . + . ID=gene-LU604_RS22445;Name=LU604_RS22445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22445;old_locus_tag=LU604_22445;pseudo=true NZ_CP089942.1 Protein Homology CDS 4244454 4245628 . + 0 ID=cds-LU604_RS22445;Parent=gene-LU604_RS22445;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200120.1;locus_tag=LU604_RS22445;product=glycosyltransferase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4245681 4246592 . + . ID=gene-LU604_RS22450;Name=LU604_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22450;old_locus_tag=LU604_22450 NZ_CP089942.1 Protein Homology CDS 4245681 4246592 . + 0 ID=cds-WP_233479320.1;Parent=gene-LU604_RS22450;Dbxref=Genbank:WP_233479320.1;Name=WP_233479320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882674.1;locus_tag=LU604_RS22450;product=hypothetical protein;protein_id=WP_233479320.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4246713 4247645 . + . ID=gene-LU604_RS22455;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=LU604_RS22455;old_locus_tag=LU604_22455 NZ_CP089942.1 Protein Homology CDS 4246713 4247645 . + 0 ID=cds-WP_233479321.1;Parent=gene-LU604_RS22455;Dbxref=Genbank:WP_233479321.1;Name=WP_233479321.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121268.1;locus_tag=LU604_RS22455;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_233479321.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4247661 4248722 . + . ID=gene-LU604_RS22460;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=LU604_RS22460;old_locus_tag=LU604_22460 NZ_CP089942.1 Protein Homology CDS 4247661 4248722 . + 0 ID=cds-WP_233479322.1;Parent=gene-LU604_RS22460;Dbxref=Genbank:WP_233479322.1;Name=WP_233479322.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013027723.1;locus_tag=LU604_RS22460;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_233479322.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4248710 4249684 . + . ID=gene-LU604_RS22465;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=LU604_RS22465;old_locus_tag=LU604_22465 NZ_CP089942.1 Protein Homology CDS 4248710 4249684 . + 0 ID=cds-WP_016191302.1;Parent=gene-LU604_RS22465;Dbxref=Genbank:WP_016191302.1;Name=WP_016191302.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511017.1;locus_tag=LU604_RS22465;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_016191302.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4249691 4250608 . + . ID=gene-LU604_RS22470;Name=LU604_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22470;old_locus_tag=LU604_22470 NZ_CP089942.1 Protein Homology CDS 4249691 4250608 . + 0 ID=cds-WP_016191303.1;Parent=gene-LU604_RS22470;Dbxref=Genbank:WP_016191303.1;Name=WP_016191303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200113.1;locus_tag=LU604_RS22470;product=glycosyltransferase family 2 protein;protein_id=WP_016191303.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4250651 4251628 . - . ID=gene-LU604_RS22475;Name=LU604_RS22475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22475;old_locus_tag=LU604_22475;pseudo=true NZ_CP089942.1 Protein Homology CDS 4250651 4251628 . - 0 ID=cds-LU604_RS22475;Parent=gene-LU604_RS22475;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200111.1;locus_tag=LU604_RS22475;product=deacetylase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4251904 4253049 . + . ID=gene-LU604_RS22480;Name=LU604_RS22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22480;old_locus_tag=LU604_22480 NZ_CP089942.1 Protein Homology CDS 4251904 4253049 . + 0 ID=cds-WP_232426871.1;Parent=gene-LU604_RS22480;Dbxref=Genbank:WP_232426871.1;Name=WP_232426871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200110.1;locus_tag=LU604_RS22480;product=glycosyltransferase;protein_id=WP_232426871.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4253250 4254119 . + . ID=gene-LU604_RS22485;Name=LU604_RS22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22485;old_locus_tag=LU604_22485 NZ_CP089942.1 Protein Homology CDS 4253250 4254119 . + 0 ID=cds-WP_233479323.1;Parent=gene-LU604_RS22485;Dbxref=Genbank:WP_233479323.1;Name=WP_233479323.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013257.2;locus_tag=LU604_RS22485;product=glycosyltransferase family 9 protein;protein_id=WP_233479323.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4254647 4255738 . + . ID=gene-LU604_RS22490;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=LU604_RS22490;old_locus_tag=LU604_22490 NZ_CP089942.1 Protein Homology CDS 4254647 4255738 . + 0 ID=cds-WP_152664234.1;Parent=gene-LU604_RS22490;Dbxref=Genbank:WP_152664234.1;Name=WP_152664234.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200107.1;locus_tag=LU604_RS22490;product=putative lipopolysaccharide heptosyltransferase III;protein_id=WP_152664234.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4255731 4256864 . + . ID=gene-LU604_RS22495;Name=LU604_RS22495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22495;old_locus_tag=LU604_22495 NZ_CP089942.1 Protein Homology CDS 4255731 4256864 . + 0 ID=cds-WP_233479324.1;Parent=gene-LU604_RS22495;Dbxref=Genbank:WP_233479324.1;Name=WP_233479324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191309.1;locus_tag=LU604_RS22495;product=glycosyltransferase family 4 protein;protein_id=WP_233479324.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4256967 4258241 . + . ID=gene-LU604_RS22500;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=LU604_RS22500;old_locus_tag=LU604_22500 NZ_CP089942.1 Protein Homology CDS 4256967 4258241 . + 0 ID=cds-WP_233479325.1;Parent=gene-LU604_RS22500;Dbxref=Genbank:WP_233479325.1;Name=WP_233479325.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455749.1;locus_tag=LU604_RS22500;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_233479325.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4258242 4259027 . + . ID=gene-LU604_RS22505;Name=LU604_RS22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22505;old_locus_tag=LU604_22505 NZ_CP089942.1 Protein Homology CDS 4258242 4259027 . + 0 ID=cds-WP_233479326.1;Parent=gene-LU604_RS22505;Dbxref=Genbank:WP_233479326.1;Name=WP_233479326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191311.1;locus_tag=LU604_RS22505;product=glycosyltransferase family 2 protein;protein_id=WP_233479326.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4259024 4259500 . + . ID=gene-LU604_RS22510;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=LU604_RS22510;old_locus_tag=LU604_22510 NZ_CP089942.1 Protein Homology CDS 4259024 4259500 . + 0 ID=cds-WP_016191312.1;Parent=gene-LU604_RS22510;Dbxref=Genbank:WP_016191312.1;Name=WP_016191312.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439842.1;locus_tag=LU604_RS22510;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_016191312.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4259520 4260329 . - . ID=gene-LU604_RS22515;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=LU604_RS22515;old_locus_tag=LU604_22515 NZ_CP089942.1 Protein Homology CDS 4259520 4260329 . - 0 ID=cds-WP_233479327.1;Parent=gene-LU604_RS22515;Dbxref=Genbank:WP_233479327.1;Name=WP_233479327.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312537.1;locus_tag=LU604_RS22515;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_233479327.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4260407 4260574 . - . ID=gene-LU604_RS22520;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LU604_RS22520;old_locus_tag=LU604_22520 NZ_CP089942.1 Protein Homology CDS 4260407 4260574 . - 0 ID=cds-WP_013094893.1;Parent=gene-LU604_RS22520;Dbxref=Genbank:WP_013094893.1;Name=WP_013094893.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=LU604_RS22520;product=50S ribosomal protein L33;protein_id=WP_013094893.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4260591 4260827 . - . ID=gene-LU604_RS22525;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=LU604_RS22525;old_locus_tag=LU604_22525 NZ_CP089942.1 Protein Homology CDS 4260591 4260827 . - 0 ID=cds-WP_016191314.1;Parent=gene-LU604_RS22525;Dbxref=Genbank:WP_016191314.1;Name=WP_016191314.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=LU604_RS22525;product=50S ribosomal protein L28;protein_id=WP_016191314.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4261089 4261772 . - . ID=gene-LU604_RS22530;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=LU604_RS22530;old_locus_tag=LU604_22530 NZ_CP089942.1 Protein Homology CDS 4261089 4261772 . - 0 ID=cds-WP_233480868.1;Parent=gene-LU604_RS22530;Dbxref=Genbank:WP_233480868.1;Name=WP_233480868.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191315.1;locus_tag=LU604_RS22530;product=DNA repair protein RadC;protein_id=WP_233480868.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4261963 4263177 . + . ID=gene-LU604_RS22535;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=LU604_RS22535;old_locus_tag=LU604_22535 NZ_CP089942.1 Protein Homology CDS 4261963 4263177 . + 0 ID=cds-WP_233479329.1;Parent=gene-LU604_RS22535;Dbxref=Genbank:WP_233479329.1;Name=WP_233479329.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666466.1;locus_tag=LU604_RS22535;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_233479329.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4263155 4263613 . + . ID=gene-LU604_RS22540;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=LU604_RS22540;old_locus_tag=LU604_22540 NZ_CP089942.1 Protein Homology CDS 4263155 4263613 . + 0 ID=cds-WP_233479330.1;Parent=gene-LU604_RS22540;Dbxref=Genbank:WP_233479330.1;Name=WP_233479330.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=LU604_RS22540;product=dUTP diphosphatase;protein_id=WP_233479330.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4263731 4264327 . + . ID=gene-LU604_RS22545;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=LU604_RS22545;old_locus_tag=LU604_22545 NZ_CP089942.1 Protein Homology CDS 4263731 4264327 . + 0 ID=cds-WP_016191318.1;Parent=gene-LU604_RS22545;Dbxref=Genbank:WP_016191318.1;Name=WP_016191318.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017348857.1;locus_tag=LU604_RS22545;product=nucleoid occlusion factor SlmA;protein_id=WP_016191318.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4264358 4264999 . - . ID=gene-LU604_RS22550;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=LU604_RS22550;old_locus_tag=LU604_22550 NZ_CP089942.1 Protein Homology CDS 4264358 4264999 . - 0 ID=cds-WP_233479331.1;Parent=gene-LU604_RS22550;Dbxref=Genbank:WP_233479331.1;Name=WP_233479331.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=LU604_RS22550;product=orotate phosphoribosyltransferase;protein_id=WP_233479331.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4265054 4265770 . - . ID=gene-LU604_RS22555;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=LU604_RS22555;old_locus_tag=LU604_22555 NZ_CP089942.1 Protein Homology CDS 4265054 4265770 . - 0 ID=cds-WP_016191320.1;Parent=gene-LU604_RS22555;Dbxref=Genbank:WP_016191320.1;Name=WP_016191320.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462634.1;locus_tag=LU604_RS22555;product=ribonuclease PH;protein_id=WP_016191320.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4265827 4266069 . - . ID=gene-LU604_RS22560;Name=LU604_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22560;old_locus_tag=LU604_22560 NZ_CP089942.1 GeneMarkS-2+ CDS 4265827 4266069 . - 0 ID=cds-WP_233479332.1;Parent=gene-LU604_RS22560;Dbxref=Genbank:WP_233479332.1;Name=WP_233479332.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS22560;product=hypothetical protein;protein_id=WP_233479332.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4266204 4267295 . - . ID=gene-LU604_RS22565;Name=LU604_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22565;old_locus_tag=LU604_22565 NZ_CP089942.1 Protein Homology CDS 4266204 4267295 . - 0 ID=cds-WP_161797002.1;Parent=gene-LU604_RS22565;Dbxref=Genbank:WP_161797002.1;Name=WP_161797002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229447.1;locus_tag=LU604_RS22565;product=ABC transporter permease;protein_id=WP_161797002.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4267321 4268232 . - . ID=gene-LU604_RS22570;Name=LU604_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22570;old_locus_tag=LU604_22570 NZ_CP089942.1 Protein Homology CDS 4267321 4268232 . - 0 ID=cds-WP_016191323.1;Parent=gene-LU604_RS22570;Dbxref=Genbank:WP_016191323.1;Name=WP_016191323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007370281.1;locus_tag=LU604_RS22570;product=ABC transporter ATP-binding protein;protein_id=WP_016191323.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4268213 4269151 . - . ID=gene-LU604_RS22575;Name=LU604_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22575;old_locus_tag=LU604_22575 NZ_CP089942.1 Protein Homology CDS 4268213 4269151 . - 0 ID=cds-WP_233479333.1;Parent=gene-LU604_RS22575;Dbxref=Genbank:WP_233479333.1;Name=WP_233479333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004889229.1;locus_tag=LU604_RS22575;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_233479333.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4269217 4270932 . - . ID=gene-LU604_RS22580;Name=LU604_RS22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22580;old_locus_tag=LU604_22580 NZ_CP089942.1 Protein Homology CDS 4269217 4270932 . - 0 ID=cds-WP_233479334.1;Parent=gene-LU604_RS22580;Dbxref=Genbank:WP_233479334.1;Name=WP_233479334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191325.1;locus_tag=LU604_RS22580;product=lysophospholipid acyltransferase family protein;protein_id=WP_233479334.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4271367 4272230 . + . ID=gene-LU604_RS22585;Name=LU604_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22585;old_locus_tag=LU604_22585 NZ_CP089942.1 Protein Homology CDS 4271367 4272230 . + 0 ID=cds-WP_016191326.1;Parent=gene-LU604_RS22585;Dbxref=Genbank:WP_016191326.1;Name=WP_016191326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=LU604_RS22585;product=YicC family protein;protein_id=WP_016191326.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4272453 4273658 . + . ID=gene-LU604_RS22590;Name=LU604_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22590;old_locus_tag=LU604_22590 NZ_CP089942.1 Protein Homology CDS 4272453 4273658 . + 0 ID=cds-WP_233479335.1;Parent=gene-LU604_RS22590;Dbxref=Genbank:WP_233479335.1;Name=WP_233479335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010617518.1;locus_tag=LU604_RS22590;product=site-specific integrase;protein_id=WP_233479335.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4273832 4274641 . + . ID=gene-LU604_RS22595;Name=LU604_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22595;old_locus_tag=LU604_22595 NZ_CP089942.1 Protein Homology CDS 4273832 4274641 . + 0 ID=cds-WP_233479336.1;Parent=gene-LU604_RS22595;Dbxref=Genbank:WP_233479336.1;Name=WP_233479336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010671245.1;locus_tag=LU604_RS22595;product=DUF3289 family protein;protein_id=WP_233479336.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4274628 4275074 . + . ID=gene-LU604_RS22600;Name=LU604_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22600;old_locus_tag=LU604_22600 NZ_CP089942.1 Protein Homology CDS 4274628 4275074 . + 0 ID=cds-WP_233479337.1;Parent=gene-LU604_RS22600;Dbxref=Genbank:WP_233479337.1;Name=WP_233479337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010671244.1;locus_tag=LU604_RS22600;product=DUF943 family protein;protein_id=WP_233479337.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4275170 4275304 . + . ID=gene-LU604_RS27080;Name=LU604_RS27080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27080 NZ_CP089942.1 GeneMarkS-2+ CDS 4275170 4275304 . + 0 ID=cds-WP_256371737.1;Parent=gene-LU604_RS27080;Dbxref=Genbank:WP_256371737.1;Name=WP_256371737.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS27080;product=hypothetical protein;protein_id=WP_256371737.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4275756 4276148 . + . ID=gene-LU604_RS22605;Name=LU604_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22605;old_locus_tag=LU604_22605 NZ_CP089942.1 GeneMarkS-2+ CDS 4275756 4276148 . + 0 ID=cds-WP_233479338.1;Parent=gene-LU604_RS22605;Dbxref=Genbank:WP_233479338.1;Name=WP_233479338.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS22605;product=hypothetical protein;protein_id=WP_233479338.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4276467 4277246 . + . ID=gene-LU604_RS22610;Name=LU604_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22610;old_locus_tag=LU604_22610 NZ_CP089942.1 Protein Homology CDS 4276467 4277246 . + 0 ID=cds-WP_233481420.1;Parent=gene-LU604_RS22610;Dbxref=Genbank:WP_233481420.1;Name=WP_233481420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001343697.1;locus_tag=LU604_RS22610;product=BRO family protein;protein_id=WP_233481420.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4277310 4278080 . + . ID=gene-LU604_RS22615;Name=LU604_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22615;old_locus_tag=LU604_22615 NZ_CP089942.1 Protein Homology CDS 4277310 4278080 . + 0 ID=cds-WP_233479340.1;Parent=gene-LU604_RS22615;Dbxref=Genbank:WP_233479340.1;Name=WP_233479340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803900.1;locus_tag=LU604_RS22615;product=Rha family transcriptional regulator;protein_id=WP_233479340.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4278089 4279483 . + . ID=gene-LU604_RS22620;Name=LU604_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22620;old_locus_tag=LU604_22620 NZ_CP089942.1 Protein Homology CDS 4278089 4279483 . + 0 ID=cds-WP_233479341.1;Parent=gene-LU604_RS22620;Dbxref=Genbank:WP_233479341.1;Name=WP_233479341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619016.1;locus_tag=LU604_RS22620;product=DEAD/DEAH box helicase;protein_id=WP_233479341.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4279480 4279731 . + . ID=gene-LU604_RS22625;Name=LU604_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22625;old_locus_tag=LU604_22625 NZ_CP089942.1 Protein Homology CDS 4279480 4279731 . + 0 ID=cds-WP_233479342.1;Parent=gene-LU604_RS22625;Dbxref=Genbank:WP_233479342.1;Name=WP_233479342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192965.1;locus_tag=LU604_RS22625;product=pyocin activator PrtN family protein;protein_id=WP_233479342.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4279822 4280775 . + . ID=gene-LU604_RS22630;Name=LU604_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22630;old_locus_tag=LU604_22630 NZ_CP089942.1 Protein Homology CDS 4279822 4280775 . + 0 ID=cds-WP_233479343.1;Parent=gene-LU604_RS22630;Dbxref=Genbank:WP_233479343.1;Name=WP_233479343.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020698.2;locus_tag=LU604_RS22630;product=Ig-like domain-containing protein;protein_id=WP_233479343.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4281195 4281594 . + . ID=gene-LU604_RS22635;Name=LU604_RS22635;end_range=4281594,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22635;old_locus_tag=LU604_22635;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4281195 4281594 . + 0 ID=cds-LU604_RS22635;Parent=gene-LU604_RS22635;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4281594,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS22635;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4281644 4282698 . - . ID=gene-LU604_RS22640;Name=LU604_RS22640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22640;old_locus_tag=LU604_22640;pseudo=true NZ_CP089942.1 Protein Homology CDS 4281644 4282698 . - 0 ID=cds-LU604_RS22640;Parent=gene-LU604_RS22640;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS22640;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4283363 4283884 . + . ID=gene-LU604_RS22645;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=LU604_RS22645;old_locus_tag=LU604_22645 NZ_CP089942.1 Protein Homology CDS 4283363 4283884 . + 0 ID=cds-WP_233479344.1;Parent=gene-LU604_RS22645;Dbxref=Genbank:WP_233479344.1;Name=WP_233479344.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154746.1;locus_tag=LU604_RS22645;product=Der GTPase-activating protein YihI;protein_id=WP_233479344.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4284136 4285503 . + . ID=gene-LU604_RS22650;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=LU604_RS22650;old_locus_tag=LU604_22650 NZ_CP089942.1 Protein Homology CDS 4284136 4285503 . + 0 ID=cds-WP_233479345.1;Parent=gene-LU604_RS22650;Dbxref=Genbank:WP_233479345.1;Name=WP_233479345.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemN;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200069.1;locus_tag=LU604_RS22650;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_233479345.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4285727 4287355 . + . ID=gene-LU604_RS22655;Name=LU604_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22655;old_locus_tag=LU604_22655 NZ_CP089942.1 Protein Homology CDS 4285727 4287355 . + 0 ID=cds-WP_233479346.1;Parent=gene-LU604_RS22655;Dbxref=Genbank:WP_233479346.1;Name=WP_233479346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191343.1;locus_tag=LU604_RS22655;product=ABC transporter substrate-binding protein;protein_id=WP_233479346.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4287499 4287708 . + . ID=gene-LU604_RS22660;Name=LU604_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22660;old_locus_tag=LU604_22660 NZ_CP089942.1 GeneMarkS-2+ CDS 4287499 4287708 . + 0 ID=cds-WP_152664230.1;Parent=gene-LU604_RS22660;Dbxref=Genbank:WP_152664230.1;Name=WP_152664230.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS22660;product=hypothetical protein;protein_id=WP_152664230.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4288036 4288149 . - . ID=gene-LU604_RS22665;Name=LU604_RS22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22665;old_locus_tag=LU604_22665 NZ_CP089942.1 Protein Homology CDS 4288036 4288149 . - 0 ID=cds-WP_152664229.1;Parent=gene-LU604_RS22665;Dbxref=Genbank:WP_152664229.1;Name=WP_152664229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007872049.1;locus_tag=LU604_RS22665;product=YshB family small membrane protein;protein_id=WP_152664229.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4288250 4289659 . - . ID=gene-LU604_RS22670;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=LU604_RS22670;old_locus_tag=LU604_22670 NZ_CP089942.1 Protein Homology CDS 4288250 4289659 . - 0 ID=cds-WP_233479347.1;Parent=gene-LU604_RS22670;Dbxref=Genbank:WP_233479347.1;Name=WP_233479347.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=LU604_RS22670;product=nitrogen regulation protein NR(I);protein_id=WP_233479347.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4289667 4290716 . - . ID=gene-LU604_RS22675;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=LU604_RS22675;old_locus_tag=LU604_22675 NZ_CP089942.1 Protein Homology CDS 4289667 4290716 . - 0 ID=cds-WP_016191345.1;Parent=gene-LU604_RS22675;Dbxref=Genbank:WP_016191345.1;Name=WP_016191345.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=LU604_RS22675;product=nitrogen regulation protein NR(II);protein_id=WP_016191345.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4290903 4292312 . - . ID=gene-LU604_RS22680;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=LU604_RS22680;old_locus_tag=LU604_22680 NZ_CP089942.1 Protein Homology CDS 4290903 4292312 . - 0 ID=cds-WP_016191347.1;Parent=gene-LU604_RS22680;Dbxref=Genbank:WP_016191347.1;Name=WP_016191347.1;Ontology_term=GO:0006542,GO:0006807,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462887.1;locus_tag=LU604_RS22680;product=glutamate--ammonia ligase;protein_id=WP_016191347.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4292754 4294577 . + . ID=gene-LU604_RS22685;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=LU604_RS22685;old_locus_tag=LU604_22685 NZ_CP089942.1 Protein Homology CDS 4292754 4294577 . + 0 ID=cds-WP_016191348.1;Parent=gene-LU604_RS22685;Dbxref=Genbank:WP_016191348.1;Name=WP_016191348.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966559.1;locus_tag=LU604_RS22685;product=ribosome-dependent GTPase TypA;protein_id=WP_016191348.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4294730 4295326 . + . ID=gene-LU604_RS22690;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=LU604_RS22690;old_locus_tag=LU604_22690 NZ_CP089942.1 Protein Homology CDS 4294730 4295326 . + 0 ID=cds-WP_233479348.1;Parent=gene-LU604_RS22690;Dbxref=Genbank:WP_233479348.1;Name=WP_233479348.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191349.1;locus_tag=LU604_RS22690;product=glucose-1-phosphatase;protein_id=WP_233479348.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4295326 4296201 . + . ID=gene-LU604_RS22695;Name=LU604_RS22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22695;old_locus_tag=LU604_22695 NZ_CP089942.1 Protein Homology CDS 4295326 4296201 . + 0 ID=cds-WP_016191350.1;Parent=gene-LU604_RS22695;Dbxref=Genbank:WP_016191350.1;Name=WP_016191350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359530.1;locus_tag=LU604_RS22695;product=virulence factor BrkB family protein;protein_id=WP_016191350.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4296198 4296635 . + . ID=gene-LU604_RS22700;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=LU604_RS22700;old_locus_tag=LU604_22700 NZ_CP089942.1 Protein Homology CDS 4296198 4296635 . + 0 ID=cds-WP_016191351.1;Parent=gene-LU604_RS22700;Dbxref=Genbank:WP_016191351.1;Name=WP_016191351.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147545.1;locus_tag=LU604_RS22700;product=D-aminoacyl-tRNA deacylase;protein_id=WP_016191351.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4296692 4297630 . + . ID=gene-LU604_RS22705;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=LU604_RS22705;old_locus_tag=LU604_22705 NZ_CP089942.1 Protein Homology CDS 4296692 4297630 . + 0 ID=cds-WP_016191352.1;Parent=gene-LU604_RS22705;Dbxref=Genbank:WP_016191352.1;Name=WP_016191352.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542874.1;locus_tag=LU604_RS22705;product=fatty acid biosynthesis protein FabY;protein_id=WP_016191352.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4297643 4298509 . - . ID=gene-LU604_RS22710;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=LU604_RS22710;old_locus_tag=LU604_22710 NZ_CP089942.1 Protein Homology CDS 4297643 4298509 . - 0 ID=cds-WP_233479349.1;Parent=gene-LU604_RS22710;Dbxref=Genbank:WP_233479349.1;Name=WP_233479349.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511642.1;locus_tag=LU604_RS22710;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_233479349.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4298548 4300230 . - . ID=gene-LU604_RS22715;Name=LU604_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22715;old_locus_tag=LU604_22715 NZ_CP089942.1 Protein Homology CDS 4298548 4300230 . - 0 ID=cds-WP_016191354.1;Parent=gene-LU604_RS22715;Dbxref=Genbank:WP_016191354.1;Name=WP_016191354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154759.1;locus_tag=LU604_RS22715;product=AsmA family protein;protein_id=WP_016191354.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4300350 4301723 . - . ID=gene-LU604_RS22720;Name=LU604_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22720;old_locus_tag=LU604_22720 NZ_CP089942.1 Protein Homology CDS 4300350 4301723 . - 0 ID=cds-WP_233479350.1;Parent=gene-LU604_RS22720;Dbxref=Genbank:WP_233479350.1;Name=WP_233479350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191355.1;locus_tag=LU604_RS22720;product=uracil-xanthine permease family protein;protein_id=WP_233479350.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4301896 4303977 . - . ID=gene-LU604_RS22725;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=LU604_RS22725;old_locus_tag=LU604_22725 NZ_CP089942.1 Protein Homology CDS 4301896 4303977 . - 0 ID=cds-WP_233479351.1;Parent=gene-LU604_RS22725;Dbxref=Genbank:WP_233479351.1;Name=WP_233479351.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010672104.1;locus_tag=LU604_RS22725;product=ATP-dependent DNA helicase RecG;protein_id=WP_233479351.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4303974 4304672 . - . ID=gene-LU604_RS22730;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=LU604_RS22730;old_locus_tag=LU604_22730 NZ_CP089942.1 Protein Homology CDS 4303974 4304672 . - 0 ID=cds-WP_016191357.1;Parent=gene-LU604_RS22730;Dbxref=Genbank:WP_016191357.1;Name=WP_016191357.1;Ontology_term=GO:0030488,GO:0008173,GO:0009020;gbkey=CDS;gene=trmH;go_function=RNA methyltransferase activity|0008173||IEA,tRNA (guanosine-2'-O-)-methyltransferase activity|0009020||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200083.1;locus_tag=LU604_RS22730;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_016191357.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4304676 4306790 . - . ID=gene-LU604_RS22735;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=LU604_RS22735;old_locus_tag=LU604_22735 NZ_CP089942.1 Protein Homology CDS 4304676 4306790 . - 0 ID=cds-WP_016191358.1;Parent=gene-LU604_RS22735;Dbxref=Genbank:WP_016191358.1;Name=WP_016191358.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=LU604_RS22735;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_016191358.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4306813 4307088 . - . ID=gene-LU604_RS22740;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=LU604_RS22740;old_locus_tag=LU604_22740 NZ_CP089942.1 Protein Homology CDS 4306813 4307088 . - 0 ID=cds-WP_016191359.1;Parent=gene-LU604_RS22740;Dbxref=Genbank:WP_016191359.1;Name=WP_016191359.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=LU604_RS22740;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_016191359.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4307142 4307765 . - . ID=gene-LU604_RS22745;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=LU604_RS22745;old_locus_tag=LU604_22745 NZ_CP089942.1 Protein Homology CDS 4307142 4307765 . - 0 ID=cds-WP_016191360.1;Parent=gene-LU604_RS22745;Dbxref=Genbank:WP_016191360.1;Name=WP_016191360.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=LU604_RS22745;product=guanylate kinase;protein_id=WP_016191360.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4308015 4309706 . + . ID=gene-LU604_RS22750;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=LU604_RS22750;old_locus_tag=LU604_22750 NZ_CP089942.1 Protein Homology CDS 4308015 4309706 . + 0 ID=cds-WP_233479352.1;Parent=gene-LU604_RS22750;Dbxref=Genbank:WP_233479352.1;Name=WP_233479352.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191361.1;locus_tag=LU604_RS22750;product=NAD-dependent DNA ligase LigB;protein_id=WP_233479352.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4309681 4309764 . - . ID=gene-LU604_RS22755;Name=LU604_RS22755;end_range=4309764,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22755;old_locus_tag=LU604_22755;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4309681 4309764 . - 0 ID=cds-LU604_RS22755;Parent=gene-LU604_RS22755;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4309764,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000924288.1;locus_tag=LU604_RS22755;partial=true;product=trimeric intracellular cation channel family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4309949 4310281 . - . ID=gene-LU604_RS22760;Name=LU604_RS22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22760;old_locus_tag=LU604_22760 NZ_CP089942.1 Protein Homology CDS 4309949 4310281 . - 0 ID=cds-WP_233479353.1;Parent=gene-LU604_RS22760;Dbxref=Genbank:WP_233479353.1;Name=WP_233479353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191362.1;locus_tag=LU604_RS22760;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_233479353.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4310478 4312457 . + . ID=gene-LU604_RS22765;Name=LU604_RS22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22765;old_locus_tag=LU604_22765 NZ_CP089942.1 Protein Homology CDS 4310478 4312457 . + 0 ID=cds-WP_016191363.1;Parent=gene-LU604_RS22765;Dbxref=Genbank:WP_016191363.1;Name=WP_016191363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009112280.1;locus_tag=LU604_RS22765;product=helix-turn-helix domain-containing protein;protein_id=WP_016191363.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4312460 4313158 . + . ID=gene-LU604_RS22770;Name=LU604_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22770;old_locus_tag=LU604_22770 NZ_CP089942.1 Protein Homology CDS 4312460 4313158 . + 0 ID=cds-WP_016191364.1;Parent=gene-LU604_RS22770;Dbxref=Genbank:WP_016191364.1;Name=WP_016191364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009112279.1;locus_tag=LU604_RS22770;product=AzlC family ABC transporter permease;protein_id=WP_016191364.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4313148 4313498 . + . ID=gene-LU604_RS22775;Name=LU604_RS22775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22775;old_locus_tag=LU604_22775 NZ_CP089942.1 Protein Homology CDS 4313148 4313498 . + 0 ID=cds-WP_016191365.1;Parent=gene-LU604_RS22775;Dbxref=Genbank:WP_016191365.1;Name=WP_016191365.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017273.2;locus_tag=LU604_RS22775;product=AzlD domain-containing protein;protein_id=WP_016191365.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4313548 4313772 . + . ID=gene-LU604_RS22780;Name=LU604_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22780;old_locus_tag=LU604_22780 NZ_CP089942.1 GeneMarkS-2+ CDS 4313548 4313772 . + 0 ID=cds-WP_016191366.1;Parent=gene-LU604_RS22780;Dbxref=Genbank:WP_016191366.1;Name=WP_016191366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS22780;product=hypothetical protein;protein_id=WP_016191366.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4314255 4314506 . - . ID=gene-LU604_RS22785;Name=LU604_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22785;old_locus_tag=LU604_22785 NZ_CP089942.1 Protein Homology CDS 4314255 4314506 . - 0 ID=cds-WP_016191367.1;Parent=gene-LU604_RS22785;Dbxref=Genbank:WP_016191367.1;Name=WP_016191367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012773560.1;locus_tag=LU604_RS22785;product=helix-turn-helix transcriptional regulator;protein_id=WP_016191367.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4314617 4314892 . + . ID=gene-LU604_RS22790;Name=LU604_RS22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22790;old_locus_tag=LU604_22790 NZ_CP089942.1 Protein Homology CDS 4314617 4314892 . + 0 ID=cds-WP_016191368.1;Parent=gene-LU604_RS22790;Dbxref=Genbank:WP_016191368.1;Name=WP_016191368.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024252.2;locus_tag=LU604_RS22790;product=helix-turn-helix transcriptional regulator;protein_id=WP_016191368.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4315451 4315744 . - . ID=gene-LU604_RS22795;Name=LU604_RS22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22795;old_locus_tag=LU604_22795 NZ_CP089942.1 Protein Homology CDS 4315451 4315744 . - 0 ID=cds-WP_233480869.1;Parent=gene-LU604_RS22795;Dbxref=Genbank:WP_233480869.1;Name=WP_233480869.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017866.2;locus_tag=LU604_RS22795;product=DUF943 family protein;protein_id=WP_233480869.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4315840 4316537 . + . ID=gene-LU604_RS22800;Name=LU604_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22800;old_locus_tag=LU604_22800 NZ_CP089942.1 Protein Homology CDS 4315840 4316101 . + 0 ID=cds-WP_233479354.1;Parent=gene-LU604_RS22800;Dbxref=Genbank:WP_233479354.1;Name=WP_233479354.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS22800;product=IS1 family transposase;protein_id=WP_233479354.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 4316101 4316537 . + 2 ID=cds-WP_233479354.1;Parent=gene-LU604_RS22800;Dbxref=Genbank:WP_233479354.1;Name=WP_233479354.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS22800;product=IS1 family transposase;protein_id=WP_233479354.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4316554 4316712 . + . ID=gene-LU604_RS22805;Name=LU604_RS22805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22805;old_locus_tag=LU604_22805;partial=true;pseudo=true;start_range=.,4316554 NZ_CP089942.1 Protein Homology CDS 4316554 4316712 . + 0 ID=cds-LU604_RS22805;Parent=gene-LU604_RS22805;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311541.1;locus_tag=LU604_RS22805;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4316554;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4316849 4317055 . + . ID=gene-LU604_RS22810;Name=LU604_RS22810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22810;old_locus_tag=LU604_22810;pseudo=true NZ_CP089942.1 Protein Homology CDS 4316849 4317055 . + 0 ID=cds-LU604_RS22810;Parent=gene-LU604_RS22810;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191372.1;locus_tag=LU604_RS22810;product=AlpA family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4317234 4317920 . - . ID=gene-LU604_RS22815;Name=LU604_RS22815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22815;old_locus_tag=LU604_22815;partial=true;pseudo=true;start_range=.,4317234 NZ_CP089942.1 Protein Homology CDS 4317234 4317920 . - 0 ID=cds-LU604_RS22815;Parent=gene-LU604_RS22815;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004148938.1;locus_tag=LU604_RS22815;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;start_range=.,4317234;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4318077 4318610 . - . ID=gene-LU604_RS22820;Name=LU604_RS22820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22820;old_locus_tag=LU604_22820;pseudo=true NZ_CP089942.1 Protein Homology CDS 4318077 4318610 . - 0 ID=cds-LU604_RS22820;Parent=gene-LU604_RS22820;Note=frameshifted%3B internal stop;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091963.1;locus_tag=LU604_RS22820;product=recombinase family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4318722 4319444 . + . ID=gene-LU604_RS22825;Name=LU604_RS22825;end_range=4319444,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22825;old_locus_tag=LU604_22825;partial=true;pseudo=true;start_range=.,4318722 NZ_CP089942.1 Protein Homology CDS 4318722 4319444 . + 0 ID=cds-LU604_RS22825;Parent=gene-LU604_RS22825;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=4319444,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619049.1;locus_tag=LU604_RS22825;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,4318722;transl_table=11 NZ_CP089942.1 RefSeq gene 4320031 4320546 . + . ID=gene-LU604_RS22830;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=LU604_RS22830;old_locus_tag=LU604_22830 NZ_CP089942.1 Protein Homology CDS 4320031 4320546 . + 0 ID=cds-WP_233480870.1;Parent=gene-LU604_RS22830;Dbxref=Genbank:WP_233480870.1;Name=WP_233480870.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191377.1;locus_tag=LU604_RS22830;product=zinc uptake transcriptional repressor Zur;protein_id=WP_233480870.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4320669 4320873 . - . ID=gene-LU604_RS22835;Name=LU604_RS22835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22835;old_locus_tag=LU604_22835;pseudo=true NZ_CP089942.1 Protein Homology CDS 4320669 4320873 . - 0 ID=cds-LU604_RS22835;Parent=gene-LU604_RS22835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132658.1;locus_tag=LU604_RS22835;product=CsbD family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4321136 4321336 . - . ID=gene-LU604_RS22840;Name=LU604_RS22840;end_range=4321336,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22840;old_locus_tag=LU604_22840;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4321136 4321336 . - 0 ID=cds-LU604_RS22840;Parent=gene-LU604_RS22840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4321336,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359775.1;locus_tag=LU604_RS22840;partial=true;product=MATE family efflux transporter DinF;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4321269 4321514 . - . ID=gene-LU604_RS22845;Name=LU604_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22845;old_locus_tag=LU604_22845 NZ_CP089942.1 GeneMarkS-2+ CDS 4321269 4321514 . - 0 ID=cds-WP_233480890.1;Parent=gene-LU604_RS22845;Dbxref=Genbank:WP_233480890.1;Name=WP_233480890.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS22845;product=hypothetical protein;protein_id=WP_233480890.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4321606 4322214 . - . ID=gene-LU604_RS22850;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=LU604_RS22850;old_locus_tag=LU604_22850 NZ_CP089942.1 Protein Homology CDS 4321606 4322214 . - 0 ID=cds-WP_016191381.1;Parent=gene-LU604_RS22850;Dbxref=Genbank:WP_016191381.1;Name=WP_016191381.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=LU604_RS22850;product=transcriptional repressor LexA;protein_id=WP_016191381.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4322321 4322689 . - . ID=gene-LU604_RS22855;Name=LU604_RS22855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22855;old_locus_tag=LU604_22855 NZ_CP089942.1 Protein Homology CDS 4322321 4322689 . - 0 ID=cds-WP_233479355.1;Parent=gene-LU604_RS22855;Dbxref=Genbank:WP_233479355.1;Name=WP_233479355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191382.1;locus_tag=LU604_RS22855;product=diacylglycerol kinase;protein_id=WP_233479355.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4322819 4325239 . + . ID=gene-LU604_RS22860;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=LU604_RS22860;old_locus_tag=LU604_22860 NZ_CP089942.1 Protein Homology CDS 4322819 4325239 . + 0 ID=cds-WP_233479356.1;Parent=gene-LU604_RS22860;Dbxref=Genbank:WP_233479356.1;Name=WP_233479356.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191383.1;locus_tag=LU604_RS22860;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_233479356.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4325413 4326297 . - . ID=gene-LU604_RS22865;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=LU604_RS22865;old_locus_tag=LU604_22865 NZ_CP089942.1 Protein Homology CDS 4325413 4326297 . - 0 ID=cds-WP_233479357.1;Parent=gene-LU604_RS22865;Dbxref=Genbank:WP_233479357.1;Name=WP_233479357.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009128586.1;locus_tag=LU604_RS22865;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_233479357.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4326299 4326826 . - . ID=gene-LU604_RS22870;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=LU604_RS22870;old_locus_tag=LU604_22870 NZ_CP089942.1 Protein Homology CDS 4326299 4326826 . - 0 ID=cds-WP_016191385.1;Parent=gene-LU604_RS22870;Dbxref=Genbank:WP_016191385.1;Name=WP_016191385.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539619.1;locus_tag=LU604_RS22870;product=chorismate lyase;protein_id=WP_016191385.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4326968 4327366 . - . ID=gene-LU604_RS22875;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=LU604_RS22875;old_locus_tag=LU604_22875 NZ_CP089942.1 Protein Homology CDS 4326968 4327366 . - 0 ID=cds-WP_016191386.1;Parent=gene-LU604_RS22875;Dbxref=Genbank:WP_016191386.1;Name=WP_016191386.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200341.1;locus_tag=LU604_RS22875;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_016191386.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4327520 4329616 . - . ID=gene-LU604_RS22880;Name=LU604_RS22880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22880;old_locus_tag=LU604_22880 NZ_CP089942.1 Protein Homology CDS 4327520 4329616 . - 0 ID=cds-WP_016191387.1;Parent=gene-LU604_RS22880;Dbxref=Genbank:WP_016191387.1;Name=WP_016191387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160506.1;locus_tag=LU604_RS22880;product=YjbH domain-containing protein;protein_id=WP_016191387.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4329616 4330371 . - . ID=gene-LU604_RS22885;Name=LU604_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22885;old_locus_tag=LU604_22885 NZ_CP089942.1 Protein Homology CDS 4329616 4330371 . - 0 ID=cds-WP_233479358.1;Parent=gene-LU604_RS22885;Dbxref=Genbank:WP_233479358.1;Name=WP_233479358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160507.1;locus_tag=LU604_RS22885;product=capsule biosynthesis GfcC family protein;protein_id=WP_233479358.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4330368 4331015 . - . ID=gene-LU604_RS22890;Name=LU604_RS22890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22890;old_locus_tag=LU604_22890 NZ_CP089942.1 Protein Homology CDS 4330368 4331015 . - 0 ID=cds-WP_233479359.1;Parent=gene-LU604_RS22890;Dbxref=Genbank:WP_233479359.1;Name=WP_233479359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171103.1;locus_tag=LU604_RS22890;product=YjbF family lipoprotein;protein_id=WP_233479359.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4331095 4331352 . - . ID=gene-LU604_RS22895;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=LU604_RS22895;old_locus_tag=LU604_22895 NZ_CP089942.1 Protein Homology CDS 4331095 4331352 . - 0 ID=cds-WP_233479360.1;Parent=gene-LU604_RS22895;Dbxref=Genbank:WP_233479360.1;Name=WP_233479360.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010252668.1;locus_tag=LU604_RS22895;product=exopolysaccharide production protein YjbE;protein_id=WP_233479360.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4331894 4333543 . - . ID=gene-LU604_RS22900;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=LU604_RS22900;old_locus_tag=LU604_22900 NZ_CP089942.1 Protein Homology CDS 4331894 4333543 . - 0 ID=cds-WP_233479361.1;Parent=gene-LU604_RS22900;Dbxref=Genbank:WP_233479361.1;Name=WP_233479361.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191391.1;locus_tag=LU604_RS22900;product=glucose-6-phosphate isomerase;protein_id=WP_233479361.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4333708 4333866 . + . ID=gene-LU604_RS22905;Name=LU604_RS22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22905;old_locus_tag=LU604_22905 NZ_CP089942.1 GeneMarkS-2+ CDS 4333708 4333866 . + 0 ID=cds-WP_161796991.1;Parent=gene-LU604_RS22905;Dbxref=Genbank:WP_161796991.1;Name=WP_161796991.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS22905;product=hypothetical protein;protein_id=WP_161796991.1;transl_table=11 NZ_CP089942.1 cmsearch riboswitch 4334087 4334334 . + . ID=id-NZ_CP089942.1:4334087..4334334;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP089942.1 RefSeq gene 4334430 4335785 . + . ID=gene-LU604_RS22910;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=LU604_RS22910;old_locus_tag=LU604_22910 NZ_CP089942.1 Protein Homology CDS 4334430 4335785 . + 0 ID=cds-WP_233479362.1;Parent=gene-LU604_RS22910;Dbxref=Genbank:WP_233479362.1;Name=WP_233479362.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171107.1;locus_tag=LU604_RS22910;product=lysine-sensitive aspartokinase 3;protein_id=WP_233479362.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4336434 4337351 . + . ID=gene-LU604_RS22915;Name=LU604_RS22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22915;old_locus_tag=LU604_22915 NZ_CP089942.1 Protein Homology CDS 4336434 4337351 . + 0 ID=cds-WP_016191393.1;Parent=gene-LU604_RS22915;Dbxref=Genbank:WP_016191393.1;Name=WP_016191393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200334.1;locus_tag=LU604_RS22915;product=bile acid:sodium symporter family protein;protein_id=WP_016191393.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4337383 4339008 . - . ID=gene-LU604_RS22920;Name=LU604_RS22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22920;old_locus_tag=LU604_22920 NZ_CP089942.1 Protein Homology CDS 4337383 4339008 . - 0 ID=cds-WP_016191394.1;Parent=gene-LU604_RS22920;Dbxref=Genbank:WP_016191394.1;Name=WP_016191394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542579.1;locus_tag=LU604_RS22920;product=Na/Pi cotransporter family protein;protein_id=WP_016191394.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4339137 4339512 . - . ID=gene-LU604_RS22925;Name=LU604_RS22925;end_range=4339512,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22925;old_locus_tag=LU604_22925;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4339137 4339512 . - 0 ID=cds-LU604_RS22925;Parent=gene-LU604_RS22925;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0005524,GO:0022857,GO:0043190;end_range=4339512,.;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379245.1;locus_tag=LU604_RS22925;partial=true;product=TOBE domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4339537 4340156 . - . ID=gene-LU604_RS22930;Name=LU604_RS22930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22930;old_locus_tag=LU604_22930;partial=true;pseudo=true;start_range=.,4339537 NZ_CP089942.1 Protein Homology CDS 4339537 4340156 . - 0 ID=cds-LU604_RS22930;Parent=gene-LU604_RS22930;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024150.1;locus_tag=LU604_RS22930;partial=true;product=alkaline phosphatase family protein;pseudo=true;start_range=.,4339537;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4340166 4340351 . - . ID=gene-LU604_RS22935;Name=LU604_RS22935;end_range=4340351,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22935;old_locus_tag=LU604_22935;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4340166 4340351 . - 0 ID=cds-LU604_RS22935;Parent=gene-LU604_RS22935;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4340351,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936660.1;locus_tag=LU604_RS22935;partial=true;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4340441 4341449 . + . ID=gene-LU604_RS22940;Name=LU604_RS22940;end_range=4341449,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS22940;old_locus_tag=LU604_22940;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4340441 4341449 . + 0 ID=cds-LU604_RS22940;Parent=gene-LU604_RS22940;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=4341449,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004722065.1;locus_tag=LU604_RS22940;partial=true;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4342373 4343302 . - . ID=gene-LU604_RS22945;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=LU604_RS22945;old_locus_tag=LU604_22945 NZ_CP089942.1 Protein Homology CDS 4342373 4343302 . - 0 ID=cds-WP_233479363.1;Parent=gene-LU604_RS22945;Dbxref=Genbank:WP_233479363.1;Name=WP_233479363.1;Ontology_term=GO:0009086,GO:0008899;gbkey=CDS;gene=metA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312958.1;locus_tag=LU604_RS22945;product=homoserine O-succinyltransferase;protein_id=WP_233479363.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4344145 4344267 . - . ID=gene-LU604_RS27085;Name=LU604_RS27085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27085 NZ_CP089942.1 GeneMarkS-2+ CDS 4344145 4344267 . - 0 ID=cds-WP_256371736.1;Parent=gene-LU604_RS27085;Dbxref=Genbank:WP_256371736.1;Name=WP_256371736.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS27085;product=hypothetical protein;protein_id=WP_256371736.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4344451 4344566 . - . ID=gene-LU604_RS22950;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LU604_RS22950;old_locus_tag=LU604_22950 NZ_CP089942.1 cmsearch rRNA 4344451 4344566 . - . ID=rna-LU604_RS22950;Parent=gene-LU604_RS22950;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS22950;product=5S ribosomal RNA NZ_CP089942.1 cmsearch exon 4344451 4344566 . - . ID=exon-LU604_RS22950-1;Parent=rna-LU604_RS22950;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS22950;product=5S ribosomal RNA NZ_CP089942.1 RefSeq gene 4344773 4347675 . - . ID=gene-LU604_RS22955;Name=LU604_RS22955;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU604_RS22955;old_locus_tag=LU604_22955 NZ_CP089942.1 cmsearch rRNA 4344773 4347675 . - . ID=rna-LU604_RS22955;Parent=gene-LU604_RS22955;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS22955;product=23S ribosomal RNA NZ_CP089942.1 cmsearch exon 4344773 4347675 . - . ID=exon-LU604_RS22955-1;Parent=rna-LU604_RS22955;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS22955;product=23S ribosomal RNA NZ_CP089942.1 RefSeq gene 4347879 4347954 . - . ID=gene-LU604_RS22960;Name=LU604_RS22960;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS22960;old_locus_tag=LU604_22960 NZ_CP089942.1 tRNAscan-SE tRNA 4347879 4347954 . - . ID=rna-LU604_RS22960;Parent=gene-LU604_RS22960;anticodon=(pos:complement(4347918..4347920));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS22960;product=tRNA-Glu NZ_CP089942.1 tRNAscan-SE exon 4347879 4347954 . - . ID=exon-LU604_RS22960-1;Parent=rna-LU604_RS22960;anticodon=(pos:complement(4347918..4347920));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS22960;product=tRNA-Glu NZ_CP089942.1 RefSeq gene 4348027 4349568 . - . ID=gene-LU604_RS22965;Name=LU604_RS22965;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU604_RS22965;old_locus_tag=LU604_22965 NZ_CP089942.1 cmsearch rRNA 4348027 4349568 . - . ID=rna-LU604_RS22965;Parent=gene-LU604_RS22965;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS22965;product=16S ribosomal RNA NZ_CP089942.1 cmsearch exon 4348027 4349568 . - . ID=exon-LU604_RS22965-1;Parent=rna-LU604_RS22965;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS22965;product=16S ribosomal RNA NZ_CP089942.1 RefSeq gene 4350077 4350631 . + . ID=gene-LU604_RS22970;Name=LU604_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22970;old_locus_tag=LU604_22970 NZ_CP089942.1 Protein Homology CDS 4350077 4350631 . + 0 ID=cds-WP_233479364.1;Parent=gene-LU604_RS22970;Dbxref=Genbank:WP_233479364.1;Name=WP_233479364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539631.1;locus_tag=LU604_RS22970;product=gamma carbonic anhydrase family protein;protein_id=WP_233479364.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4350607 4350858 . - . ID=gene-LU604_RS22975;Name=LU604_RS22975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22975;old_locus_tag=LU604_22975 NZ_CP089942.1 Protein Homology CDS 4350607 4350858 . - 0 ID=cds-WP_020322719.1;Parent=gene-LU604_RS22975;Dbxref=Genbank:WP_020322719.1;Name=WP_020322719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812183.1;locus_tag=LU604_RS22975;product=DUF1488 domain-containing protein;protein_id=WP_020322719.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4350855 4351676 . - . ID=gene-LU604_RS22980;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=LU604_RS22980;old_locus_tag=LU604_22980 NZ_CP089942.1 Protein Homology CDS 4350855 4351676 . - 0 ID=cds-WP_233479365.1;Parent=gene-LU604_RS22980;Dbxref=Genbank:WP_233479365.1;Name=WP_233479365.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322720.1;locus_tag=LU604_RS22980;product=shikimate dehydrogenase;protein_id=WP_233479365.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4351682 4352254 . - . ID=gene-LU604_RS22985;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=LU604_RS22985;old_locus_tag=LU604_22985 NZ_CP089942.1 Protein Homology CDS 4351682 4352254 . - 0 ID=cds-WP_020322721.1;Parent=gene-LU604_RS22985;Dbxref=Genbank:WP_020322721.1;Name=WP_020322721.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803693.1;locus_tag=LU604_RS22985;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_020322721.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4352247 4352801 . - . ID=gene-LU604_RS22990;Name=LU604_RS22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS22990;old_locus_tag=LU604_22990 NZ_CP089942.1 Protein Homology CDS 4352247 4352801 . - 0 ID=cds-WP_233479366.1;Parent=gene-LU604_RS22990;Dbxref=Genbank:WP_233479366.1;Name=WP_233479366.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322722.1;locus_tag=LU604_RS22990;product=type I DNA topoisomerase;protein_id=WP_233479366.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4352829 4353302 . - . ID=gene-LU604_RS22995;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=LU604_RS22995;old_locus_tag=LU604_22995 NZ_CP089942.1 Protein Homology CDS 4352829 4353302 . - 0 ID=cds-WP_020322724.1;Parent=gene-LU604_RS22995;Dbxref=Genbank:WP_020322724.1;Name=WP_020322724.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=LU604_RS22995;product=DUF494 family protein Smg;protein_id=WP_020322724.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4353274 4354398 . - . ID=gene-LU604_RS23000;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=LU604_RS23000;old_locus_tag=LU604_23000 NZ_CP089942.1 Protein Homology CDS 4353274 4354398 . - 0 ID=cds-WP_233479367.1;Parent=gene-LU604_RS23000;Dbxref=Genbank:WP_233479367.1;Name=WP_233479367.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171118.1;locus_tag=LU604_RS23000;product=DNA-protecting protein DprA;protein_id=WP_233479367.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4354515 4355027 . + . ID=gene-LU604_RS23005;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=LU604_RS23005;old_locus_tag=LU604_23005 NZ_CP089942.1 Protein Homology CDS 4354515 4355027 . + 0 ID=cds-WP_020322727.1;Parent=gene-LU604_RS23005;Dbxref=Genbank:WP_020322727.1;Name=WP_020322727.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204109.1;locus_tag=LU604_RS23005;product=peptide deformylase;protein_id=WP_020322727.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4355049 4355990 . + . ID=gene-LU604_RS23010;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=LU604_RS23010;old_locus_tag=LU604_23010 NZ_CP089942.1 Protein Homology CDS 4355049 4355990 . + 0 ID=cds-WP_233479368.1;Parent=gene-LU604_RS23010;Dbxref=Genbank:WP_233479368.1;Name=WP_233479368.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322728.1;locus_tag=LU604_RS23010;product=methionyl-tRNA formyltransferase;protein_id=WP_233479368.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4356038 4357327 . + . ID=gene-LU604_RS23015;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=LU604_RS23015;old_locus_tag=LU604_23015 NZ_CP089942.1 Protein Homology CDS 4356038 4357327 . + 0 ID=cds-WP_233479369.1;Parent=gene-LU604_RS23015;Dbxref=Genbank:WP_233479369.1;Name=WP_233479369.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322729.1;locus_tag=LU604_RS23015;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_233479369.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4357374 4358750 . + . ID=gene-LU604_RS23020;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=LU604_RS23020;old_locus_tag=LU604_23020 NZ_CP089942.1 Protein Homology CDS 4357374 4358750 . + 0 ID=cds-WP_233479370.1;Parent=gene-LU604_RS23020;Dbxref=Genbank:WP_233479370.1;Name=WP_233479370.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=LU604_RS23020;product=Trk system potassium transporter TrkA;protein_id=WP_233479370.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4358903 4359111 . + . ID=gene-LU604_RS23025;Name=LU604_RS23025;end_range=4359111,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23025;old_locus_tag=LU604_23025;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4358903 4359111 . + 0 ID=cds-LU604_RS23025;Parent=gene-LU604_RS23025;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4359111,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611678.1;locus_tag=LU604_RS23025;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4359338 4359574 . + . ID=gene-LU604_RS23030;Name=LU604_RS23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23030;old_locus_tag=LU604_23030 NZ_CP089942.1 Protein Homology CDS 4359338 4359574 . + 0 ID=cds-WP_020322732.1;Parent=gene-LU604_RS23030;Dbxref=Genbank:WP_020322732.1;Name=WP_020322732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088781.1;locus_tag=LU604_RS23030;product=hypothetical protein;protein_id=WP_020322732.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4359543 4360328 . - . ID=gene-LU604_RS23035;Name=LU604_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23035;old_locus_tag=LU604_23035 NZ_CP089942.1 Protein Homology CDS 4359543 4360328 . - 0 ID=cds-WP_233479371.1;Parent=gene-LU604_RS23035;Dbxref=Genbank:WP_233479371.1;Name=WP_233479371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192697.1;locus_tag=LU604_RS23035;product=DNA adenine methylase;protein_id=WP_233479371.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4360734 4361774 . + . ID=gene-LU604_RS23040;Name=LU604_RS23040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23040;old_locus_tag=LU604_23040 NZ_CP089942.1 Protein Homology CDS 4360734 4361774 . + 0 ID=cds-WP_233478553.1-29;Parent=gene-LU604_RS23040;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS23040;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4362120 4362816 . + . ID=gene-LU604_RS23045;Name=LU604_RS23045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23045;old_locus_tag=LU604_23045;pseudo=true NZ_CP089942.1 Protein Homology CDS 4362120 4362816 . + 0 ID=cds-LU604_RS23045;Parent=gene-LU604_RS23045;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=LU604_RS23045;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4362954 4363376 . - . ID=gene-LU604_RS23050;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=LU604_RS23050;old_locus_tag=LU604_23050 NZ_CP089942.1 Protein Homology CDS 4362954 4363376 . - 0 ID=cds-WP_020322752.1;Parent=gene-LU604_RS23050;Dbxref=Genbank:WP_020322752.1;Name=WP_020322752.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539642.1;locus_tag=LU604_RS23050;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_020322752.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4363376 4363735 . - . ID=gene-LU604_RS23055;Name=LU604_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23055;old_locus_tag=LU604_23055 NZ_CP089942.1 Protein Homology CDS 4363376 4363735 . - 0 ID=cds-WP_233479372.1;Parent=gene-LU604_RS23055;Dbxref=Genbank:WP_233479372.1;Name=WP_233479372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008104726.1;locus_tag=LU604_RS23055;product=DUF1992 domain-containing protein;protein_id=WP_233479372.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4363840 4364226 . - . ID=gene-LU604_RS23060;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=LU604_RS23060;old_locus_tag=LU604_23060 NZ_CP089942.1 Protein Homology CDS 4363840 4364226 . - 0 ID=cds-WP_020322755.1;Parent=gene-LU604_RS23060;Dbxref=Genbank:WP_020322755.1;Name=WP_020322755.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229143.1;locus_tag=LU604_RS23060;product=50S ribosomal protein L17;protein_id=WP_020322755.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4364267 4365256 . - . ID=gene-LU604_RS23065;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=LU604_RS23065;old_locus_tag=LU604_23065 NZ_CP089942.1 Protein Homology CDS 4364267 4365256 . - 0 ID=cds-WP_020322756.1;Parent=gene-LU604_RS23065;Dbxref=Genbank:WP_020322756.1;Name=WP_020322756.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=LU604_RS23065;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_020322756.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4365282 4365902 . - . ID=gene-LU604_RS23070;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=LU604_RS23070;old_locus_tag=LU604_23070 NZ_CP089942.1 Protein Homology CDS 4365282 4365902 . - 0 ID=cds-WP_020322757.1;Parent=gene-LU604_RS23070;Dbxref=Genbank:WP_020322757.1;Name=WP_020322757.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=LU604_RS23070;product=30S ribosomal protein S4;protein_id=WP_020322757.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4365935 4366324 . - . ID=gene-LU604_RS23075;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=LU604_RS23075;old_locus_tag=LU604_23075 NZ_CP089942.1 Protein Homology CDS 4365935 4366324 . - 0 ID=cds-WP_233479373.1;Parent=gene-LU604_RS23075;Dbxref=Genbank:WP_233479373.1;Name=WP_233479373.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=LU604_RS23075;product=30S ribosomal protein S11;protein_id=WP_233479373.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4366341 4366697 . - . ID=gene-LU604_RS23080;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=LU604_RS23080;old_locus_tag=LU604_23080 NZ_CP089942.1 Protein Homology CDS 4366341 4366697 . - 0 ID=cds-WP_020322759.1;Parent=gene-LU604_RS23080;Dbxref=Genbank:WP_020322759.1;Name=WP_020322759.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=LU604_RS23080;product=30S ribosomal protein S13;protein_id=WP_020322759.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4366834 4366950 . - . ID=gene-LU604_RS23085;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=LU604_RS23085;old_locus_tag=LU604_23085 NZ_CP089942.1 Protein Homology CDS 4366834 4366950 . - 0 ID=cds-WP_020322760.1;Parent=gene-LU604_RS23085;Dbxref=Genbank:WP_020322760.1;Name=WP_020322760.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=LU604_RS23085;product=50S ribosomal protein L36;protein_id=WP_020322760.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4366982 4368313 . - . ID=gene-LU604_RS23090;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=LU604_RS23090;old_locus_tag=LU604_23090 NZ_CP089942.1 Protein Homology CDS 4366982 4368313 . - 0 ID=cds-WP_233479374.1;Parent=gene-LU604_RS23090;Dbxref=Genbank:WP_233479374.1;Name=WP_233479374.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312192.1;locus_tag=LU604_RS23090;product=preprotein translocase subunit SecY;protein_id=WP_233479374.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4368321 4368755 . - . ID=gene-LU604_RS23095;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=LU604_RS23095;old_locus_tag=LU604_23095 NZ_CP089942.1 Protein Homology CDS 4368321 4368755 . - 0 ID=cds-WP_020322762.1;Parent=gene-LU604_RS23095;Dbxref=Genbank:WP_020322762.1;Name=WP_020322762.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=LU604_RS23095;product=50S ribosomal protein L15;protein_id=WP_020322762.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4368759 4368938 . - . ID=gene-LU604_RS23100;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=LU604_RS23100;old_locus_tag=LU604_23100 NZ_CP089942.1 Protein Homology CDS 4368759 4368938 . - 0 ID=cds-WP_004160569.1;Parent=gene-LU604_RS23100;Dbxref=Genbank:WP_004160569.1;Name=WP_004160569.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=LU604_RS23100;product=50S ribosomal protein L30;protein_id=WP_004160569.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4368944 4369444 . - . ID=gene-LU604_RS23105;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=LU604_RS23105;old_locus_tag=LU604_23105 NZ_CP089942.1 Protein Homology CDS 4368944 4369444 . - 0 ID=cds-WP_020322763.1;Parent=gene-LU604_RS23105;Dbxref=Genbank:WP_020322763.1;Name=WP_020322763.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445361.1;locus_tag=LU604_RS23105;product=30S ribosomal protein S5;protein_id=WP_020322763.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4369459 4369812 . - . ID=gene-LU604_RS23110;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=LU604_RS23110;old_locus_tag=LU604_23110 NZ_CP089942.1 Protein Homology CDS 4369459 4369812 . - 0 ID=cds-WP_020322764.1;Parent=gene-LU604_RS23110;Dbxref=Genbank:WP_020322764.1;Name=WP_020322764.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=LU604_RS23110;product=50S ribosomal protein L18;protein_id=WP_020322764.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4369822 4370355 . - . ID=gene-LU604_RS23115;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=LU604_RS23115;old_locus_tag=LU604_23115 NZ_CP089942.1 Protein Homology CDS 4369822 4370355 . - 0 ID=cds-WP_020322765.1;Parent=gene-LU604_RS23115;Dbxref=Genbank:WP_020322765.1;Name=WP_020322765.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=LU604_RS23115;product=50S ribosomal protein L6;protein_id=WP_020322765.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4370367 4370759 . - . ID=gene-LU604_RS23120;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=LU604_RS23120;old_locus_tag=LU604_23120 NZ_CP089942.1 Protein Homology CDS 4370367 4370759 . - 0 ID=cds-WP_020322766.1;Parent=gene-LU604_RS23120;Dbxref=Genbank:WP_020322766.1;Name=WP_020322766.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=LU604_RS23120;product=30S ribosomal protein S8;protein_id=WP_020322766.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4370790 4371095 . - . ID=gene-LU604_RS23125;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=LU604_RS23125;old_locus_tag=LU604_23125 NZ_CP089942.1 Protein Homology CDS 4370790 4371095 . - 0 ID=cds-WP_020322768.1;Parent=gene-LU604_RS23125;Dbxref=Genbank:WP_020322768.1;Name=WP_020322768.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=LU604_RS23125;product=30S ribosomal protein S14;protein_id=WP_020322768.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4371110 4371649 . - . ID=gene-LU604_RS23130;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=LU604_RS23130;old_locus_tag=LU604_23130 NZ_CP089942.1 Protein Homology CDS 4371110 4371649 . - 0 ID=cds-WP_020322769.1;Parent=gene-LU604_RS23130;Dbxref=Genbank:WP_020322769.1;Name=WP_020322769.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=LU604_RS23130;product=50S ribosomal protein L5;protein_id=WP_020322769.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4371664 4371978 . - . ID=gene-LU604_RS23135;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=LU604_RS23135;old_locus_tag=LU604_23135 NZ_CP089942.1 Protein Homology CDS 4371664 4371978 . - 0 ID=cds-WP_020322770.1;Parent=gene-LU604_RS23135;Dbxref=Genbank:WP_020322770.1;Name=WP_020322770.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=LU604_RS23135;product=50S ribosomal protein L24;protein_id=WP_020322770.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4371989 4372360 . - . ID=gene-LU604_RS23140;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=LU604_RS23140;old_locus_tag=LU604_23140 NZ_CP089942.1 Protein Homology CDS 4371989 4372360 . - 0 ID=cds-WP_020322771.1;Parent=gene-LU604_RS23140;Dbxref=Genbank:WP_020322771.1;Name=WP_020322771.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=LU604_RS23140;product=50S ribosomal protein L14;protein_id=WP_020322771.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4372527 4372781 . - . ID=gene-LU604_RS23145;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=LU604_RS23145;old_locus_tag=LU604_23145 NZ_CP089942.1 Protein Homology CDS 4372527 4372781 . - 0 ID=cds-WP_020322772.1;Parent=gene-LU604_RS23145;Dbxref=Genbank:WP_020322772.1;Name=WP_020322772.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=LU604_RS23145;product=30S ribosomal protein S17;protein_id=WP_020322772.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4372781 4372972 . - . ID=gene-LU604_RS23150;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=LU604_RS23150;old_locus_tag=LU604_23150 NZ_CP089942.1 Protein Homology CDS 4372781 4372972 . - 0 ID=cds-WP_020322773.1;Parent=gene-LU604_RS23150;Dbxref=Genbank:WP_020322773.1;Name=WP_020322773.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929762.1;locus_tag=LU604_RS23150;product=50S ribosomal protein L29;protein_id=WP_020322773.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4372972 4373382 . - . ID=gene-LU604_RS23155;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=LU604_RS23155;old_locus_tag=LU604_23155 NZ_CP089942.1 Protein Homology CDS 4372972 4373382 . - 0 ID=cds-WP_002919759.1;Parent=gene-LU604_RS23155;Dbxref=Genbank:WP_002919759.1;Name=WP_002919759.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=LU604_RS23155;product=50S ribosomal protein L16;protein_id=WP_002919759.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4373395 4374093 . - . ID=gene-LU604_RS23160;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=LU604_RS23160;old_locus_tag=LU604_23160 NZ_CP089942.1 Protein Homology CDS 4373395 4374093 . - 0 ID=cds-WP_006817277.1;Parent=gene-LU604_RS23160;Dbxref=Genbank:WP_006817277.1;Name=WP_006817277.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=LU604_RS23160;product=30S ribosomal protein S3;protein_id=WP_006817277.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4374111 4374443 . - . ID=gene-LU604_RS23165;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=LU604_RS23165;old_locus_tag=LU604_23165 NZ_CP089942.1 Protein Homology CDS 4374111 4374443 . - 0 ID=cds-WP_020322777.1;Parent=gene-LU604_RS23165;Dbxref=Genbank:WP_020322777.1;Name=WP_020322777.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=LU604_RS23165;product=50S ribosomal protein L22;protein_id=WP_020322777.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4374456 4374734 . - . ID=gene-LU604_RS23170;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=LU604_RS23170;old_locus_tag=LU604_23170 NZ_CP089942.1 Protein Homology CDS 4374456 4374734 . - 0 ID=cds-WP_013204132.1;Parent=gene-LU604_RS23170;Dbxref=Genbank:WP_013204132.1;Name=WP_013204132.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=LU604_RS23170;product=30S ribosomal protein S19;protein_id=WP_013204132.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4374751 4375572 . - . ID=gene-LU604_RS23175;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=LU604_RS23175;old_locus_tag=LU604_23175 NZ_CP089942.1 Protein Homology CDS 4374751 4375572 . - 0 ID=cds-WP_020322778.1;Parent=gene-LU604_RS23175;Dbxref=Genbank:WP_020322778.1;Name=WP_020322778.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=LU604_RS23175;product=50S ribosomal protein L2;protein_id=WP_020322778.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4375590 4375892 . - . ID=gene-LU604_RS23180;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=LU604_RS23180;old_locus_tag=LU604_23180 NZ_CP089942.1 Protein Homology CDS 4375590 4375892 . - 0 ID=cds-WP_020322779.1;Parent=gene-LU604_RS23180;Dbxref=Genbank:WP_020322779.1;Name=WP_020322779.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=LU604_RS23180;product=50S ribosomal protein L23;protein_id=WP_020322779.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4375889 4376494 . - . ID=gene-LU604_RS23185;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=LU604_RS23185;old_locus_tag=LU604_23185 NZ_CP089942.1 Protein Homology CDS 4375889 4376494 . - 0 ID=cds-WP_020322781.1;Parent=gene-LU604_RS23185;Dbxref=Genbank:WP_020322781.1;Name=WP_020322781.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=LU604_RS23185;product=50S ribosomal protein L4;protein_id=WP_020322781.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4376505 4377134 . - . ID=gene-LU604_RS23190;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=LU604_RS23190;old_locus_tag=LU604_23190 NZ_CP089942.1 Protein Homology CDS 4376505 4377134 . - 0 ID=cds-WP_020322782.1;Parent=gene-LU604_RS23190;Dbxref=Genbank:WP_020322782.1;Name=WP_020322782.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=LU604_RS23190;product=50S ribosomal protein L3;protein_id=WP_020322782.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4377167 4377478 . - . ID=gene-LU604_RS23195;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=LU604_RS23195;old_locus_tag=LU604_23195 NZ_CP089942.1 Protein Homology CDS 4377167 4377478 . - 0 ID=cds-WP_001181005.1;Parent=gene-LU604_RS23195;Dbxref=Genbank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=LU604_RS23195;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4377745 4378158 . - . ID=gene-LU604_RS23200;Name=LU604_RS23200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23200;old_locus_tag=LU604_23200 NZ_CP089942.1 GeneMarkS-2+ CDS 4377745 4378158 . - 0 ID=cds-WP_020322783.1;Parent=gene-LU604_RS23200;Dbxref=Genbank:WP_020322783.1;Name=WP_020322783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS23200;product=hypothetical protein;protein_id=WP_020322783.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4378155 4378757 . - . ID=gene-LU604_RS23205;Name=LU604_RS23205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23205;old_locus_tag=LU604_23205 NZ_CP089942.1 Protein Homology CDS 4378155 4378757 . - 0 ID=cds-WP_233479375.1;Parent=gene-LU604_RS23205;Dbxref=Genbank:WP_233479375.1;Name=WP_233479375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322784.1;locus_tag=LU604_RS23205;product=hypothetical protein;protein_id=WP_233479375.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4378944 4380128 . - . ID=gene-LU604_RS23210;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LU604_RS23210;old_locus_tag=LU604_23210 NZ_CP089942.1 Protein Homology CDS 4378944 4380128 . - 0 ID=cds-WP_020322785.1;Parent=gene-LU604_RS23210;Dbxref=Genbank:WP_020322785.1;Name=WP_020322785.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312930.1;locus_tag=LU604_RS23210;product=elongation factor Tu;protein_id=WP_020322785.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4380199 4382313 . - . ID=gene-LU604_RS23215;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LU604_RS23215;old_locus_tag=LU604_23215 NZ_CP089942.1 Protein Homology CDS 4380199 4382313 . - 0 ID=cds-WP_020322786.1;Parent=gene-LU604_RS23215;Dbxref=Genbank:WP_020322786.1;Name=WP_020322786.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=LU604_RS23215;product=elongation factor G;protein_id=WP_020322786.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4382401 4382871 . - . ID=gene-LU604_RS23220;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=LU604_RS23220;old_locus_tag=LU604_23220 NZ_CP089942.1 Protein Homology CDS 4382401 4382871 . - 0 ID=cds-WP_017350059.1;Parent=gene-LU604_RS23220;Dbxref=Genbank:WP_017350059.1;Name=WP_017350059.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=LU604_RS23220;product=30S ribosomal protein S7;protein_id=WP_017350059.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4382968 4383342 . - . ID=gene-LU604_RS23225;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=LU604_RS23225;old_locus_tag=LU604_23225 NZ_CP089942.1 Protein Homology CDS 4382968 4383342 . - 0 ID=cds-WP_013204141.1;Parent=gene-LU604_RS23225;Dbxref=Genbank:WP_013204141.1;Name=WP_013204141.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=LU604_RS23225;product=30S ribosomal protein S12;protein_id=WP_013204141.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4383469 4383756 . - . ID=gene-LU604_RS23230;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=LU604_RS23230;old_locus_tag=LU604_23230 NZ_CP089942.1 Protein Homology CDS 4383469 4383756 . - 0 ID=cds-WP_233479376.1;Parent=gene-LU604_RS23230;Dbxref=Genbank:WP_233479376.1;Name=WP_233479376.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160605.1;locus_tag=LU604_RS23230;product=sulfurtransferase complex subunit TusB;protein_id=WP_233479376.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4383763 4384122 . - . ID=gene-LU604_RS23235;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=LU604_RS23235;old_locus_tag=LU604_23235 NZ_CP089942.1 Protein Homology CDS 4383763 4384122 . - 0 ID=cds-WP_020322788.1;Parent=gene-LU604_RS23235;Dbxref=Genbank:WP_020322788.1;Name=WP_020322788.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160606.1;locus_tag=LU604_RS23235;product=sulfurtransferase complex subunit TusC;protein_id=WP_020322788.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4384122 4384508 . - . ID=gene-LU604_RS23240;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=LU604_RS23240;old_locus_tag=LU604_23240 NZ_CP089942.1 Protein Homology CDS 4384122 4384508 . - 0 ID=cds-WP_020322791.1;Parent=gene-LU604_RS23240;Dbxref=Genbank:WP_020322791.1;Name=WP_020322791.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960724.1;locus_tag=LU604_RS23240;product=sulfurtransferase complex subunit TusD;protein_id=WP_020322791.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4384508 4385230 . - . ID=gene-LU604_RS23245;Name=LU604_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23245;old_locus_tag=LU604_23245 NZ_CP089942.1 Protein Homology CDS 4384508 4385230 . - 0 ID=cds-WP_020322792.1;Parent=gene-LU604_RS23245;Dbxref=Genbank:WP_020322792.1;Name=WP_020322792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312224.2;locus_tag=LU604_RS23245;product=transcriptional regulator;protein_id=WP_020322792.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4385427 4386266 . - . ID=gene-LU604_RS23250;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=LU604_RS23250;old_locus_tag=LU604_23250 NZ_CP089942.1 Protein Homology CDS 4385427 4386266 . - 0 ID=cds-WP_233479377.1;Parent=gene-LU604_RS23250;Dbxref=Genbank:WP_233479377.1;Name=WP_233479377.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359250.1;locus_tag=LU604_RS23250;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_233479377.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4386553 4386768 . + . ID=gene-LU604_RS23255;Name=LU604_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23255;old_locus_tag=LU604_23255 NZ_CP089942.1 Protein Homology CDS 4386553 4386768 . + 0 ID=cds-WP_020322794.1;Parent=gene-LU604_RS23255;Dbxref=Genbank:WP_020322794.1;Name=WP_020322794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442853.1;locus_tag=LU604_RS23255;product=SlyX family protein;protein_id=WP_020322794.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4386899 4387420 . - . ID=gene-LU604_RS23260;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=LU604_RS23260;old_locus_tag=LU604_23260 NZ_CP089942.1 Protein Homology CDS 4386899 4387420 . - 0 ID=cds-WP_233479378.1;Parent=gene-LU604_RS23260;Dbxref=Genbank:WP_233479378.1;Name=WP_233479378.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542604.1;locus_tag=LU604_RS23260;product=peptidylprolyl isomerase;protein_id=WP_233479378.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4387557 4387751 . - . ID=gene-LU604_RS23265;Name=LU604_RS23265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23265;old_locus_tag=LU604_23265 NZ_CP089942.1 Protein Homology CDS 4387557 4387751 . - 0 ID=cds-WP_020322796.1;Parent=gene-LU604_RS23265;Dbxref=Genbank:WP_020322796.1;Name=WP_020322796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803029.1;locus_tag=LU604_RS23265;product=YheV family putative metal-binding protein;protein_id=WP_020322796.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4387760 4389565 . - . ID=gene-LU604_RS23270;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=LU604_RS23270;old_locus_tag=LU604_23270 NZ_CP089942.1 Protein Homology CDS 4387760 4389565 . - 0 ID=cds-WP_233479379.1;Parent=gene-LU604_RS23270;Dbxref=Genbank:WP_233479379.1;Name=WP_233479379.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455504.1;locus_tag=LU604_RS23270;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_233479379.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4389566 4390117 . - . ID=gene-LU604_RS23275;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=LU604_RS23275;old_locus_tag=LU604_23275 NZ_CP089942.1 Protein Homology CDS 4389566 4390117 . - 0 ID=cds-WP_020322798.1;Parent=gene-LU604_RS23275;Dbxref=Genbank:WP_020322798.1;Name=WP_020322798.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374173.1;locus_tag=LU604_RS23275;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_020322798.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4390346 4392253 . + . ID=gene-LU604_RS23280;Name=LU604_RS23280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23280;old_locus_tag=LU604_23280 NZ_CP089942.1 Protein Homology CDS 4390346 4392253 . + 0 ID=cds-WP_233479380.1;Parent=gene-LU604_RS23280;Dbxref=Genbank:WP_233479380.1;Name=WP_233479380.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322799.1;locus_tag=LU604_RS23280;product=ABC transporter ATP-binding protein;protein_id=WP_233479380.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4392495 4393334 . - . ID=gene-LU604_RS23285;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=LU604_RS23285;old_locus_tag=LU604_23285 NZ_CP089942.1 Protein Homology CDS 4392495 4393334 . - 0 ID=cds-WP_233479381.1;Parent=gene-LU604_RS23285;Dbxref=Genbank:WP_233479381.1;Name=WP_233479381.1;Ontology_term=GO:0016491;gbkey=CDS;gene=tauD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322801.1;locus_tag=LU604_RS23285;product=taurine dioxygenase;protein_id=WP_233479381.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4393335 4394159 . - . ID=gene-LU604_RS23290;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=LU604_RS23290;old_locus_tag=LU604_23290 NZ_CP089942.1 Protein Homology CDS 4393335 4394159 . - 0 ID=cds-WP_233479382.1;Parent=gene-LU604_RS23290;Dbxref=Genbank:WP_233479382.1;Name=WP_233479382.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tauC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322802.1;locus_tag=LU604_RS23290;product=taurine ABC transporter permease TauC;protein_id=WP_233479382.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4394156 4394923 . - . ID=gene-LU604_RS23295;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=LU604_RS23295;old_locus_tag=LU604_23295 NZ_CP089942.1 Protein Homology CDS 4394156 4394923 . - 0 ID=cds-WP_020322803.1;Parent=gene-LU604_RS23295;Dbxref=Genbank:WP_020322803.1;Name=WP_020322803.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;gene=tauB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814805.1;locus_tag=LU604_RS23295;product=taurine ABC transporter ATP-binding subunit;protein_id=WP_020322803.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4394935 4395891 . - . ID=gene-LU604_RS23300;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=LU604_RS23300;old_locus_tag=LU604_23300 NZ_CP089942.1 Protein Homology CDS 4394935 4395891 . - 0 ID=cds-WP_233480871.1;Parent=gene-LU604_RS23300;Dbxref=Genbank:WP_233480871.1;Name=WP_233480871.1;Ontology_term=GO:0055085,GO:0022857,GO:0042597,GO:0043190;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594767.1;locus_tag=LU604_RS23300;product=taurine ABC transporter substrate-binding protein;protein_id=WP_233480871.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4396241 4396986 . - . ID=gene-LU604_RS23305;Name=LU604_RS23305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23305;old_locus_tag=LU604_23305;partial=true;pseudo=true;start_range=.,4396241 NZ_CP089942.1 Protein Homology CDS 4396241 4396986 . - 0 ID=cds-LU604_RS23305;Parent=gene-LU604_RS23305;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS23305;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,4396241;transl_table=11 NZ_CP089942.1 RefSeq gene 4397046 4397648 . - . ID=gene-LU604_RS23310;Name=LU604_RS23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23310;old_locus_tag=LU604_23310 NZ_CP089942.1 Protein Homology CDS 4397046 4397648 . - 0 ID=cds-WP_233479383.1;Parent=gene-LU604_RS23310;Dbxref=Genbank:WP_233479383.1;Name=WP_233479383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852942.1;locus_tag=LU604_RS23310;product=LysE family translocator;protein_id=WP_233479383.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4397733 4398695 . + . ID=gene-LU604_RS23315;Name=LU604_RS23315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23315;old_locus_tag=LU604_23315;pseudo=true NZ_CP089942.1 Protein Homology CDS 4397733 4398695 . + 0 ID=cds-LU604_RS23315;Parent=gene-LU604_RS23315;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542614.1;locus_tag=LU604_RS23315;product=hydrolase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4398721 4398942 . + . ID=gene-LU604_RS23320;Name=LU604_RS23320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23320;old_locus_tag=LU604_23320 NZ_CP089942.1 Protein Homology CDS 4398721 4398942 . + 0 ID=cds-WP_020322812.1;Parent=gene-LU604_RS23320;Dbxref=Genbank:WP_020322812.1;Name=WP_020322812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003023615.1;locus_tag=LU604_RS23320;product=YheU family protein;protein_id=WP_020322812.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4399259 4400128 . + . ID=gene-LU604_RS23325;Name=LU604_RS23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23325;old_locus_tag=LU604_23325 NZ_CP089942.1 Protein Homology CDS 4399259 4400128 . + 0 ID=cds-WP_046372173.1;Parent=gene-LU604_RS23325;Dbxref=Genbank:WP_046372173.1;Name=WP_046372173.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417814.1;locus_tag=LU604_RS23325;product=phosphoribulokinase;protein_id=WP_046372173.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4400158 4400565 . - . ID=gene-LU604_RS23330;Name=LU604_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23330;old_locus_tag=LU604_23330 NZ_CP089942.1 Protein Homology CDS 4400158 4400565 . - 0 ID=cds-WP_020322814.1;Parent=gene-LU604_RS23330;Dbxref=Genbank:WP_020322814.1;Name=WP_020322814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852949.1;locus_tag=LU604_RS23330;product=OsmC family protein;protein_id=WP_020322814.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4400876 4401508 . + . ID=gene-LU604_RS23335;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=LU604_RS23335;old_locus_tag=LU604_23335 NZ_CP089942.1 Protein Homology CDS 4400876 4401508 . + 0 ID=cds-WP_020322815.1;Parent=gene-LU604_RS23335;Dbxref=Genbank:WP_020322815.1;Name=WP_020322815.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462369.1;locus_tag=LU604_RS23335;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_020322815.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4401566 4403631 . + . ID=gene-LU604_RS23340;Name=LU604_RS23340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23340;old_locus_tag=LU604_23340;pseudo=true NZ_CP089942.1 Protein Homology CDS 4401566 4403631 . + 0 ID=cds-LU604_RS23340;Parent=gene-LU604_RS23340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899103.1;locus_tag=LU604_RS23340;product=YccS/YhfK family putative transporter;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4403663 4404883 . - . ID=gene-LU604_RS23345;Name=LU604_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23345;old_locus_tag=LU604_23345 NZ_CP089942.1 Protein Homology CDS 4403663 4404883 . - 0 ID=cds-WP_020322816.1;Parent=gene-LU604_RS23345;Dbxref=Genbank:WP_020322816.1;Name=WP_020322816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963792.1;locus_tag=LU604_RS23345;product=aspartate aminotransferase family protein;protein_id=WP_020322816.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4404968 4405543 . - . ID=gene-LU604_RS23350;Name=LU604_RS23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23350;old_locus_tag=LU604_23350 NZ_CP089942.1 Protein Homology CDS 4404968 4405543 . - 0 ID=cds-WP_020322817.1;Parent=gene-LU604_RS23350;Dbxref=Genbank:WP_020322817.1;Name=WP_020322817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171152.1;locus_tag=LU604_RS23350;product=aminodeoxychorismate synthase component II;protein_id=WP_020322817.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4405646 4406218 . - . ID=gene-LU604_RS23355;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=LU604_RS23355;old_locus_tag=LU604_23355 NZ_CP089942.1 Protein Homology CDS 4405646 4406218 . - 0 ID=cds-WP_020322818.1;Parent=gene-LU604_RS23355;Dbxref=Genbank:WP_020322818.1;Name=WP_020322818.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=LU604_RS23355;product=peptidylprolyl isomerase A;protein_id=WP_020322818.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4406493 4407677 . + . ID=gene-LU604_RS23360;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=LU604_RS23360;old_locus_tag=LU604_23360 NZ_CP089942.1 Protein Homology CDS 4406493 4407677 . + 0 ID=cds-WP_233479384.1;Parent=gene-LU604_RS23360;Dbxref=Genbank:WP_233479384.1;Name=WP_233479384.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007892246.1;locus_tag=LU604_RS23360;product=MFS transporter TsgA;protein_id=WP_233479384.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4407723 4409000 . - . ID=gene-LU604_RS23365;Name=LU604_RS23365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23365;old_locus_tag=LU604_23365;pseudo=true NZ_CP089942.1 Protein Homology CDS 4407723 4409000 . - 0 ID=cds-LU604_RS23365;Parent=gene-LU604_RS23365;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899105.1;locus_tag=LU604_RS23365;product=cytosine deaminase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4409165 4409602 . + . ID=gene-LU604_RS23370;Name=LU604_RS23370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23370;old_locus_tag=LU604_23370 NZ_CP089942.1 Protein Homology CDS 4409165 4409602 . + 0 ID=cds-WP_233479385.1;Parent=gene-LU604_RS23370;Dbxref=Genbank:WP_233479385.1;Name=WP_233479385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322825.1;locus_tag=LU604_RS23370;product=hypothetical protein;protein_id=WP_233479385.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4409641 4410645 . - . ID=gene-LU604_RS23375;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=LU604_RS23375;old_locus_tag=LU604_23375 NZ_CP089942.1 Protein Homology CDS 4409641 4410645 . - 0 ID=cds-WP_233479386.1;Parent=gene-LU604_RS23375;Dbxref=Genbank:WP_233479386.1;Name=WP_233479386.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539686.1;locus_tag=LU604_RS23375;product=tryptophan--tRNA ligase;protein_id=WP_233479386.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4410642 4411340 . - . ID=gene-LU604_RS23380;Name=LU604_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23380;old_locus_tag=LU604_23380 NZ_CP089942.1 Protein Homology CDS 4410642 4411340 . - 0 ID=cds-WP_020322827.1;Parent=gene-LU604_RS23380;Dbxref=Genbank:WP_020322827.1;Name=WP_020322827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171161.1;locus_tag=LU604_RS23380;product=phosphoglycolate phosphatase;protein_id=WP_020322827.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4411324 4412010 . - . ID=gene-LU604_RS23385;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=LU604_RS23385;old_locus_tag=LU604_23385 NZ_CP089942.1 Protein Homology CDS 4411324 4412010 . - 0 ID=cds-WP_020322828.1;Parent=gene-LU604_RS23385;Dbxref=Genbank:WP_020322828.1;Name=WP_020322828.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008107883.1;locus_tag=LU604_RS23385;product=ribulose-phosphate 3-epimerase;protein_id=WP_020322828.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4412064 4412885 . - . ID=gene-LU604_RS23390;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=LU604_RS23390;old_locus_tag=LU604_23390 NZ_CP089942.1 Protein Homology CDS 4412064 4412885 . - 0 ID=cds-WP_233479387.1;Parent=gene-LU604_RS23390;Dbxref=Genbank:WP_233479387.1;Name=WP_233479387.1;Ontology_term=GO:0032775,GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322829.1;locus_tag=LU604_RS23390;product=adenine-specific DNA-methyltransferase;protein_id=WP_233479387.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4413012 4413992 . - . ID=gene-LU604_RS23395;Name=LU604_RS23395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23395;old_locus_tag=LU604_23395 NZ_CP089942.1 Protein Homology CDS 4413012 4413992 . - 0 ID=cds-WP_020322833.1;Parent=gene-LU604_RS23395;Dbxref=Genbank:WP_020322833.1;Name=WP_020322833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014542628.1;locus_tag=LU604_RS23395;product=SPOR domain-containing protein;protein_id=WP_020322833.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4414088 4415176 . - . ID=gene-LU604_RS23400;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=LU604_RS23400;old_locus_tag=LU604_23400 NZ_CP089942.1 Protein Homology CDS 4414088 4415176 . - 0 ID=cds-WP_020322834.1;Parent=gene-LU604_RS23400;Dbxref=Genbank:WP_020322834.1;Name=WP_020322834.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312258.1;locus_tag=LU604_RS23400;product=3-dehydroquinate synthase;protein_id=WP_020322834.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4415227 4415748 . - . ID=gene-LU604_RS23405;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=LU604_RS23405;old_locus_tag=LU604_23405 NZ_CP089942.1 Protein Homology CDS 4415227 4415748 . - 0 ID=cds-WP_020322835.1;Parent=gene-LU604_RS23405;Dbxref=Genbank:WP_020322835.1;Name=WP_020322835.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=LU604_RS23405;product=shikimate kinase AroK;protein_id=WP_020322835.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4416131 4417387 . - . ID=gene-LU604_RS23410;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=LU604_RS23410;old_locus_tag=LU604_23410 NZ_CP089942.1 Protein Homology CDS 4416131 4417387 . - 0 ID=cds-WP_082103814.1;Parent=gene-LU604_RS23410;Dbxref=Genbank:WP_082103814.1;Name=WP_082103814.1;gbkey=CDS;gene=hofQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004173502.1;locus_tag=LU604_RS23410;product=DNA uptake porin HofQ;protein_id=WP_082103814.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4417323 4417727 . - . ID=gene-LU604_RS23415;Name=LU604_RS23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23415;old_locus_tag=LU604_23415 NZ_CP089942.1 GeneMarkS-2+ CDS 4417323 4417727 . - 0 ID=cds-WP_082103813.1;Parent=gene-LU604_RS23415;Dbxref=Genbank:WP_082103813.1;Name=WP_082103813.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS23415;product=DNA utilization family protein;protein_id=WP_082103813.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4417714 4418217 . - . ID=gene-LU604_RS23420;Name=LU604_RS23420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23420;old_locus_tag=LU604_23420 NZ_CP089942.1 GeneMarkS-2+ CDS 4417714 4418217 . - 0 ID=cds-WP_020322838.1;Parent=gene-LU604_RS23420;Dbxref=Genbank:WP_020322838.1;Name=WP_020322838.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS23420;product=hypothetical protein;protein_id=WP_020322838.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4418207 4418791 . - . ID=gene-LU604_RS23425;Name=LU604_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23425;old_locus_tag=LU604_23425 NZ_CP089942.1 Protein Homology CDS 4418207 4418791 . - 0 ID=cds-WP_233479388.1;Parent=gene-LU604_RS23425;Dbxref=Genbank:WP_233479388.1;Name=WP_233479388.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016992.2;locus_tag=LU604_RS23425;product=PilN domain-containing protein;protein_id=WP_233479388.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4418791 4419615 . - . ID=gene-LU604_RS23430;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=LU604_RS23430;old_locus_tag=LU604_23430 NZ_CP089942.1 Protein Homology CDS 4418791 4419615 . - 0 ID=cds-WP_233479389.1;Parent=gene-LU604_RS23430;Dbxref=Genbank:WP_233479389.1;Name=WP_233479389.1;gbkey=CDS;gene=pilM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322840.1;locus_tag=LU604_RS23430;product=pilus assembly protein PilM;protein_id=WP_233479389.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4419767 4422313 . + . ID=gene-LU604_RS23435;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=LU604_RS23435;old_locus_tag=LU604_23435 NZ_CP089942.1 Protein Homology CDS 4419767 4422313 . + 0 ID=cds-WP_233479390.1;Parent=gene-LU604_RS23435;Dbxref=Genbank:WP_233479390.1;Name=WP_233479390.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=LU604_RS23435;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_233479390.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4422547 4422978 . - . ID=gene-LU604_RS23440;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS23440;old_locus_tag=LU604_23440;pseudo=true NZ_CP089942.1 Protein Homology CDS 4422547 4422978 . - 0 ID=cds-LU604_RS23440;Parent=gene-LU604_RS23440;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU604_RS23440;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4423149 4423715 . - . ID=gene-LU604_RS23445;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=LU604_RS23445;old_locus_tag=LU604_23445 NZ_CP089942.1 Protein Homology CDS 4423149 4423715 . - 0 ID=cds-WP_020322842.1;Parent=gene-LU604_RS23445;Dbxref=Genbank:WP_020322842.1;Name=WP_020322842.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160701.1;locus_tag=LU604_RS23445;product=ADP compounds hydrolase NudE;protein_id=WP_020322842.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4424120 4426258 . + . ID=gene-LU604_RS23450;Name=LU604_RS23450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23450;old_locus_tag=LU604_23450 NZ_CP089942.1 Protein Homology CDS 4424120 4426258 . + 0 ID=cds-WP_233479391.1;Parent=gene-LU604_RS23450;Dbxref=Genbank:WP_233479391.1;Name=WP_233479391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442890.1;locus_tag=LU604_RS23450;product=intracellular growth attenuator family protein;protein_id=WP_233479391.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4426389 4426790 . + . ID=gene-LU604_RS23455;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=LU604_RS23455;old_locus_tag=LU604_23455 NZ_CP089942.1 Protein Homology CDS 4426389 4426790 . + 0 ID=cds-WP_020322844.1;Parent=gene-LU604_RS23455;Dbxref=Genbank:WP_020322844.1;Name=WP_020322844.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003853009.1;locus_tag=LU604_RS23455;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_020322844.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4426813 4427691 . + . ID=gene-LU604_RS23460;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=LU604_RS23460;old_locus_tag=LU604_23460 NZ_CP089942.1 Protein Homology CDS 4426813 4427691 . + 0 ID=cds-WP_233479392.1;Parent=gene-LU604_RS23460;Dbxref=Genbank:WP_233479392.1;Name=WP_233479392.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539702.1;locus_tag=LU604_RS23460;product=Hsp33 family molecular chaperone HslO;protein_id=WP_233479392.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4428031 4429644 . + . ID=gene-LU604_RS23465;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=LU604_RS23465;old_locus_tag=LU604_23465 NZ_CP089942.1 Protein Homology CDS 4428031 4429644 . + 0 ID=cds-WP_233479393.1;Parent=gene-LU604_RS23465;Dbxref=Genbank:WP_233479393.1;Name=WP_233479393.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004385527.1;locus_tag=LU604_RS23465;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_233479393.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4430328 4431680 . - . ID=gene-LU604_RS23470;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=LU604_RS23470;old_locus_tag=LU604_23470 NZ_CP089942.1 Protein Homology CDS 4430328 4431680 . - 0 ID=cds-WP_233479394.1;Parent=gene-LU604_RS23470;Dbxref=Genbank:WP_233479394.1;Name=WP_233479394.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322848.1;locus_tag=LU604_RS23470;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_233479394.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4431677 4432396 . - . ID=gene-LU604_RS23475;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=LU604_RS23475;old_locus_tag=LU604_23475 NZ_CP089942.1 Protein Homology CDS 4431677 4432396 . - 0 ID=cds-WP_001157751.1;Parent=gene-LU604_RS23475;Dbxref=Genbank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014646135.1;locus_tag=LU604_RS23475;product=two-component system response regulator OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4432469 4432684 . + . ID=gene-LU604_RS23480;Name=LU604_RS23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23480;old_locus_tag=LU604_23480 NZ_CP089942.1 GeneMarkS-2+ CDS 4432469 4432684 . + 0 ID=cds-WP_233479395.1;Parent=gene-LU604_RS23480;Dbxref=Genbank:WP_233479395.1;Name=WP_233479395.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS23480;product=hypothetical protein;protein_id=WP_233479395.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4432699 4433178 . + . ID=gene-LU604_RS23485;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=LU604_RS23485;old_locus_tag=LU604_23485 NZ_CP089942.1 Protein Homology CDS 4432699 4433178 . + 0 ID=cds-WP_020322851.1;Parent=gene-LU604_RS23485;Dbxref=Genbank:WP_020322851.1;Name=WP_020322851.1;Ontology_term=GO:0006354,GO:0003711;gbkey=CDS;gene=greB;go_function=transcription elongation factor activity|0003711||IEA;go_process=DNA-templated transcription elongation|0006354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899111.1;locus_tag=LU604_RS23485;product=transcription elongation factor GreB;protein_id=WP_020322851.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4433272 4435590 . + . ID=gene-LU604_RS23490;Name=LU604_RS23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23490;old_locus_tag=LU604_23490 NZ_CP089942.1 Protein Homology CDS 4433272 4435590 . + 0 ID=cds-WP_020322852.1;Parent=gene-LU604_RS23490;Dbxref=Genbank:WP_020322852.1;Name=WP_020322852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171179.1;locus_tag=LU604_RS23490;product=Tex family protein;protein_id=WP_020322852.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4435737 4435961 . + . ID=gene-LU604_RS23495;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=LU604_RS23495;old_locus_tag=LU604_23495 NZ_CP089942.1 Protein Homology CDS 4435737 4435961 . + 0 ID=cds-WP_020322853.1;Parent=gene-LU604_RS23495;Dbxref=Genbank:WP_020322853.1;Name=WP_020322853.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246763.1;locus_tag=LU604_RS23495;product=ferrous iron transporter A;protein_id=WP_020322853.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4435975 4438275 . + . ID=gene-LU604_RS23500;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=LU604_RS23500;old_locus_tag=LU604_23500 NZ_CP089942.1 Protein Homology CDS 4435975 4438275 . + 0 ID=cds-WP_233479396.1;Parent=gene-LU604_RS23500;Dbxref=Genbank:WP_233479396.1;Name=WP_233479396.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091014.1;locus_tag=LU604_RS23500;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_233479396.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4438989 4439258 . - . ID=gene-LU604_RS23505;Name=LU604_RS23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23505;old_locus_tag=LU604_23505 NZ_CP089942.1 Protein Homology CDS 4438989 4439258 . - 0 ID=cds-WP_020322855.1;Parent=gene-LU604_RS23505;Dbxref=Genbank:WP_020322855.1;Name=WP_020322855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208921.1;locus_tag=LU604_RS23505;product=DUF1471 domain-containing protein;protein_id=WP_020322855.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4439430 4440206 . - . ID=gene-LU604_RS23510;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=LU604_RS23510;old_locus_tag=LU604_23510 NZ_CP089942.1 Protein Homology CDS 4439430 4440206 . - 0 ID=cds-WP_020322856.1;Parent=gene-LU604_RS23510;Dbxref=Genbank:WP_020322856.1;Name=WP_020322856.1;Ontology_term=GO:0009102,GO:0003824;gbkey=CDS;gene=bioH;go_function=catalytic activity|0003824||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013510833.1;locus_tag=LU604_RS23510;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_020322856.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4440241 4440924 . + . ID=gene-LU604_RS23515;Name=LU604_RS23515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23515;old_locus_tag=LU604_23515 NZ_CP089942.1 Protein Homology CDS 4440241 4440924 . + 0 ID=cds-WP_040465451.1;Parent=gene-LU604_RS23515;Dbxref=Genbank:WP_040465451.1;Name=WP_040465451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014604845.1;locus_tag=LU604_RS23515;product=phosphoribosyltransferase;protein_id=WP_040465451.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4440983 4441558 . + . ID=gene-LU604_RS23520;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=LU604_RS23520;old_locus_tag=LU604_23520 NZ_CP089942.1 Protein Homology CDS 4440983 4441558 . + 0 ID=cds-WP_020322858.1;Parent=gene-LU604_RS23520;Dbxref=Genbank:WP_020322858.1;Name=WP_020322858.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=LU604_RS23520;product=Fe-S biogenesis protein NfuA;protein_id=WP_020322858.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4441582 4443146 . - . ID=gene-LU604_RS23525;Name=malQ;end_range=4443146,.;gbkey=Gene;gene=malQ;gene_biotype=pseudogene;locus_tag=LU604_RS23525;old_locus_tag=LU604_23525;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4441582 4443146 . - 0 ID=cds-LU604_RS23525;Parent=gene-LU604_RS23525;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005980,GO:0004134;end_range=4443146,.;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436475.1;locus_tag=LU604_RS23525;partial=true;product=4-alpha-glucanotransferase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4443222 4443437 . - . ID=gene-LU604_RS27090;Name=LU604_RS27090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS27090;pseudo=true NZ_CP089942.1 Protein Homology CDS 4443222 4443437 . - 0 ID=cds-LU604_RS27090;Parent=gene-LU604_RS27090;Note=internal stop;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012563.2;locus_tag=LU604_RS27090;product=glycogen/starch/alpha-glucan phosphorylase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4443463 4443750 . - . ID=gene-LU604_RS27095;Name=LU604_RS27095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27095 NZ_CP089942.1 Protein Homology CDS 4443463 4443750 . - 0 ID=cds-WP_267932816.1;Parent=gene-LU604_RS27095;Dbxref=Genbank:WP_267932816.1;Name=WP_267932816.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012563.2;locus_tag=LU604_RS27095;product=glycogen/starch/alpha-glucan phosphorylase;protein_id=WP_267932816.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4443690 4444133 . - . ID=gene-LU604_RS23535;Name=LU604_RS23535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23535;old_locus_tag=LU604_23535;pseudo=true NZ_CP089942.1 Protein Homology CDS 4443690 4444133 . - 0 ID=cds-LU604_RS23535;Parent=gene-LU604_RS23535;Note=internal stop;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012563.2;locus_tag=LU604_RS23535;product=glycogen/starch/alpha-glucan phosphorylase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4444387 4445145 . - . ID=gene-LU604_RS23540;Name=LU604_RS23540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23540;old_locus_tag=LU604_23540 NZ_CP089942.1 Protein Homology CDS 4444387 4445145 . - 0 ID=cds-WP_020322864.1;Parent=gene-LU604_RS23540;Dbxref=Genbank:WP_020322864.1;Name=WP_020322864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=LU604_RS23540;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_020322864.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4445173 4445991 . - . ID=gene-LU604_RS23545;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=LU604_RS23545;old_locus_tag=LU604_23545 NZ_CP089942.1 Protein Homology CDS 4445173 4445991 . - 0 ID=cds-WP_040465502.1;Parent=gene-LU604_RS23545;Dbxref=Genbank:WP_040465502.1;Name=WP_040465502.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106467.1;locus_tag=LU604_RS23545;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_040465502.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4446061 4446390 . - . ID=gene-LU604_RS23550;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=LU604_RS23550;old_locus_tag=LU604_23550 NZ_CP089942.1 Protein Homology CDS 4446061 4446390 . - 0 ID=cds-WP_020322866.1;Parent=gene-LU604_RS23550;Dbxref=Genbank:WP_020322866.1;Name=WP_020322866.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204219.1;locus_tag=LU604_RS23550;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_020322866.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4446614 4448122 . + . ID=gene-LU604_RS23555;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=LU604_RS23555;old_locus_tag=LU604_23555 NZ_CP089942.1 Protein Homology CDS 4446614 4448122 . + 0 ID=cds-WP_020322869.1;Parent=gene-LU604_RS23555;Dbxref=Genbank:WP_020322869.1;Name=WP_020322869.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229244.1;locus_tag=LU604_RS23555;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_020322869.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4448444 4449207 . + . ID=gene-LU604_RS23560;Name=LU604_RS23560;end_range=4449207,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23560;old_locus_tag=LU604_23560;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4448444 4449207 . + 0 ID=cds-LU604_RS23560;Parent=gene-LU604_RS23560;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4449207,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558329.1;locus_tag=LU604_RS23560;partial=true;product=transposase domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4449247 4449348 . - . ID=gene-LU604_RS23565;Name=LU604_RS23565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23565;old_locus_tag=LU604_23565 NZ_CP089942.1 Protein Homology CDS 4449247 4449348 . - 0 ID=cds-WP_233480838.1-2;Parent=gene-LU604_RS23565;Dbxref=Genbank:WP_233480838.1;Name=WP_233480838.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021873.2;locus_tag=LU604_RS23565;product=DUF2442 domain-containing protein;protein_id=WP_233480838.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4449507 4450560 . - . ID=gene-LU604_RS23570;Name=LU604_RS23570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23570;old_locus_tag=LU604_23570;pseudo=true NZ_CP089942.1 Protein Homology CDS 4449507 4450560 . - 0 ID=cds-LU604_RS23570;Parent=gene-LU604_RS23570;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS23570;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4450736 4450885 . - . ID=gene-LU604_RS23575;Name=ssb;end_range=4450885,.;gbkey=Gene;gene=ssb;gene_biotype=pseudogene;locus_tag=LU604_RS23575;old_locus_tag=LU604_23575;partial=true;pseudo=true;start_range=.,4450736 NZ_CP089942.1 Protein Homology CDS 4450736 4450885 . - 0 ID=cds-LU604_RS23575;Parent=gene-LU604_RS23575;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;end_range=4450885,.;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168322.1;locus_tag=LU604_RS23575;partial=true;product=single-stranded DNA-binding protein;pseudo=true;start_range=.,4450736;transl_table=11 NZ_CP089942.1 RefSeq gene 4450901 4451185 . - . ID=gene-LU604_RS23580;Name=LU604_RS23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23580;old_locus_tag=LU604_23580 NZ_CP089942.1 GeneMarkS-2+ CDS 4450901 4451185 . - 0 ID=cds-WP_152664245.1;Parent=gene-LU604_RS23580;Dbxref=Genbank:WP_152664245.1;Name=WP_152664245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS23580;product=hypothetical protein;protein_id=WP_152664245.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4451590 4451844 . - . ID=gene-LU604_RS23585;Name=LU604_RS23585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23585;old_locus_tag=LU604_23585;partial=true;pseudo=true;start_range=.,4451590 NZ_CP089942.1 Protein Homology CDS 4451590 4451844 . - 0 ID=cds-LU604_RS23585;Parent=gene-LU604_RS23585;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608353.1;locus_tag=LU604_RS23585;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4451590;transl_table=11 NZ_CP089942.1 RefSeq gene 4452408 4452533 . - . ID=gene-LU604_RS27100;Name=LU604_RS27100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27100 NZ_CP089942.1 GeneMarkS-2+ CDS 4452408 4452533 . - 0 ID=cds-WP_256371735.1;Parent=gene-LU604_RS27100;Dbxref=Genbank:WP_256371735.1;Name=WP_256371735.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS27100;product=hypothetical protein;protein_id=WP_256371735.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4452808 4454046 . - . ID=gene-LU604_RS23590;Name=LU604_RS23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23590;old_locus_tag=LU604_23590 NZ_CP089942.1 Protein Homology CDS 4452808 4454046 . - 0 ID=cds-WP_233479397.1;Parent=gene-LU604_RS23590;Dbxref=Genbank:WP_233479397.1;Name=WP_233479397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168413.1;locus_tag=LU604_RS23590;product=serine kinase;protein_id=WP_233479397.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4454088 4455335 . - . ID=gene-LU604_RS23595;Name=LU604_RS23595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23595;old_locus_tag=LU604_23595 NZ_CP089942.1 Protein Homology CDS 4454088 4455335 . - 0 ID=cds-WP_233479398.1;Parent=gene-LU604_RS23595;Dbxref=Genbank:WP_233479398.1;Name=WP_233479398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168412.1;locus_tag=LU604_RS23595;product=ATP-grasp domain-containing protein;protein_id=WP_233479398.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4455469 4456374 . - . ID=gene-LU604_RS23600;Name=LU604_RS23600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23600;old_locus_tag=LU604_23600 NZ_CP089942.1 Protein Homology CDS 4455469 4456374 . - 0 ID=cds-WP_233479399.1;Parent=gene-LU604_RS23600;Dbxref=Genbank:WP_233479399.1;Name=WP_233479399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155334.1;locus_tag=LU604_RS23600;product=amidinotransferase;protein_id=WP_233479399.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4456377 4457600 . + . ID=gene-LU604_RS23605;Name=LU604_RS23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23605;old_locus_tag=LU604_23605 NZ_CP089942.1 Protein Homology CDS 4456377 4457600 . + 0 ID=cds-WP_233481421.1;Parent=gene-LU604_RS23605;Dbxref=Genbank:WP_233481421.1;Name=WP_233481421.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU604_RS23605;product=IS91 family transposase;protein_id=WP_233481421.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4457735 4458049 . - . ID=gene-LU604_RS23610;Name=LU604_RS23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23610;old_locus_tag=LU604_23610 NZ_CP089942.1 GeneMarkS-2+ CDS 4457735 4458049 . - 0 ID=cds-WP_233479400.1;Parent=gene-LU604_RS23610;Dbxref=Genbank:WP_233479400.1;Name=WP_233479400.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS23610;product=hypothetical protein;protein_id=WP_233479400.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4458784 4458936 . + . ID=gene-LU604_RS23615;Name=LU604_RS23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23615;old_locus_tag=LU604_23615 NZ_CP089942.1 Protein Homology CDS 4458784 4458936 . + 0 ID=cds-WP_232426850.1;Parent=gene-LU604_RS23615;Dbxref=Genbank:WP_232426850.1;Name=WP_232426850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039621.1;locus_tag=LU604_RS23615;product=DUF5993 family protein;protein_id=WP_232426850.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4458945 4459496 . + . ID=gene-LU604_RS23620;Name=LU604_RS23620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23620;old_locus_tag=LU604_23620 NZ_CP089942.1 Protein Homology CDS 4458945 4459496 . + 0 ID=cds-WP_233479401.1;Parent=gene-LU604_RS23620;Dbxref=Genbank:WP_233479401.1;Name=WP_233479401.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543222.1;locus_tag=LU604_RS23620;product=disulfide bond formation protein B;protein_id=WP_233479401.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4459571 4460350 . + . ID=gene-LU604_RS23625;Name=LU604_RS23625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23625;old_locus_tag=LU604_23625 NZ_CP089942.1 Protein Homology CDS 4459571 4460350 . + 0 ID=cds-WP_233479402.1;Parent=gene-LU604_RS23625;Dbxref=Genbank:WP_233479402.1;Name=WP_233479402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322885.1;locus_tag=LU604_RS23625;product=phytochelatin synthase family protein;protein_id=WP_233479402.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4460420 4462183 . + . ID=gene-LU604_RS23630;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=LU604_RS23630;old_locus_tag=LU604_23630 NZ_CP089942.1 Protein Homology CDS 4460420 4462183 . + 0 ID=cds-WP_020322886.1;Parent=gene-LU604_RS23630;Dbxref=Genbank:WP_020322886.1;Name=WP_020322886.1;Ontology_term=GO:0006750;gbkey=CDS;gene=ggt;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012772805.1;locus_tag=LU604_RS23630;product=gamma-glutamyltransferase;protein_id=WP_020322886.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4462555 4462968 . - . ID=gene-LU604_RS23635;Name=LU604_RS23635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23635;old_locus_tag=LU604_23635 NZ_CP089942.1 Protein Homology CDS 4462555 4462968 . - 0 ID=cds-WP_232426837.1;Parent=gene-LU604_RS23635;Dbxref=Genbank:WP_232426837.1;Name=WP_232426837.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027307.2;locus_tag=LU604_RS23635;product=helix-turn-helix domain-containing protein;protein_id=WP_232426837.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4464311 4464766 . + . ID=gene-LU604_RS23640;Name=LU604_RS23640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23640;old_locus_tag=LU604_23640 NZ_CP089942.1 GeneMarkS-2+ CDS 4464311 4464766 . + 0 ID=cds-WP_233479403.1;Parent=gene-LU604_RS23640;Dbxref=Genbank:WP_233479403.1;Name=WP_233479403.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS23640;product=hypothetical protein;protein_id=WP_233479403.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4464771 4466087 . + . ID=gene-LU604_RS23645;Name=LU604_RS23645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23645;old_locus_tag=LU604_23645 NZ_CP089942.1 Protein Homology CDS 4464771 4466087 . + 0 ID=cds-WP_233479404.1;Parent=gene-LU604_RS23645;Dbxref=Genbank:WP_233479404.1;Name=WP_233479404.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01844.1;locus_tag=LU604_RS23645;product=TolC family outer membrane protein;protein_id=WP_233479404.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4466111 4467370 . + . ID=gene-LU604_RS23650;Name=LU604_RS23650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23650;old_locus_tag=LU604_23650 NZ_CP089942.1 Protein Homology CDS 4466111 4467370 . + 0 ID=cds-WP_040465454.1;Parent=gene-LU604_RS23650;Dbxref=Genbank:WP_040465454.1;Name=WP_040465454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010256789.1;locus_tag=LU604_RS23650;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_040465454.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4467400 4469550 . + . ID=gene-LU604_RS23655;Name=LU604_RS23655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23655;old_locus_tag=LU604_23655 NZ_CP089942.1 Protein Homology CDS 4467400 4469550 . + 0 ID=cds-WP_046372171.1;Parent=gene-LU604_RS23655;Dbxref=Genbank:WP_046372171.1;Name=WP_046372171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356588.1;locus_tag=LU604_RS23655;product=peptidase domain-containing ABC transporter;protein_id=WP_046372171.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4470119 4470982 . - . ID=gene-LU604_RS23660;Name=LU604_RS23660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23660;old_locus_tag=LU604_23660 NZ_CP089942.1 Protein Homology CDS 4470119 4470982 . - 0 ID=cds-WP_233479405.1;Parent=gene-LU604_RS23660;Dbxref=Genbank:WP_233479405.1;Name=WP_233479405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322893.1;locus_tag=LU604_RS23660;product=SDR family oxidoreductase;protein_id=WP_233479405.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4471106 4471534 . + . ID=gene-LU604_RS23665;Name=LU604_RS23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23665;old_locus_tag=LU604_23665 NZ_CP089942.1 Protein Homology CDS 4471106 4471534 . + 0 ID=cds-WP_233479406.1;Parent=gene-LU604_RS23665;Dbxref=Genbank:WP_233479406.1;Name=WP_233479406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322895.1;locus_tag=LU604_RS23665;product=helix-turn-helix domain-containing protein;protein_id=WP_233479406.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4471601 4471852 . - . ID=gene-LU604_RS23670;Name=LU604_RS23670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23670;old_locus_tag=LU604_23670 NZ_CP089942.1 Protein Homology CDS 4471601 4471852 . - 0 ID=cds-WP_020322896.1;Parent=gene-LU604_RS23670;Dbxref=Genbank:WP_020322896.1;Name=WP_020322896.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: protein motif:HMM:NF013377.2;locus_tag=LU604_RS23670;product=trehalase family glycosidase;protein_id=WP_020322896.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4472338 4472891 . - . ID=gene-LU604_RS23675;Name=repA;gbkey=Gene;gene=repA;gene_biotype=pseudogene;locus_tag=LU604_RS23675;old_locus_tag=LU604_23675;partial=true;pseudo=true;start_range=.,4472338 NZ_CP089942.1 Protein Homology CDS 4472338 4472891 . - 0 ID=cds-LU604_RS23675;Parent=gene-LU604_RS23675;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=repA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002225475.1;locus_tag=LU604_RS23675;partial=true;product=plasmid replication initiator RepA;pseudo=true;start_range=.,4472338;transl_table=11 NZ_CP089942.1 RefSeq gene 4473138 4473380 . - . ID=gene-LU604_RS23680;Name=LU604_RS23680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23680;old_locus_tag=LU604_23680 NZ_CP089942.1 Protein Homology CDS 4473138 4473380 . - 0 ID=cds-WP_020322900.1;Parent=gene-LU604_RS23680;Dbxref=Genbank:WP_020322900.1;Name=WP_020322900.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022183.2;locus_tag=LU604_RS23680;product=hypothetical protein;protein_id=WP_020322900.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4473458 4474279 . - . ID=gene-LU604_RS23685;Name=LU604_RS23685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23685;old_locus_tag=LU604_23685 NZ_CP089942.1 Protein Homology CDS 4473458 4474279 . - 0 ID=cds-WP_233479407.1;Parent=gene-LU604_RS23685;Dbxref=Genbank:WP_233479407.1;Name=WP_233479407.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019154.2;locus_tag=LU604_RS23685;product=DNA-binding domain-containing protein;protein_id=WP_233479407.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4474215 4474850 . - . ID=gene-LU604_RS23690;Name=LU604_RS23690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23690;old_locus_tag=LU604_23690 NZ_CP089942.1 Protein Homology CDS 4474215 4474850 . - 0 ID=cds-WP_233479408.1;Parent=gene-LU604_RS23690;Dbxref=Genbank:WP_233479408.1;Name=WP_233479408.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03760.1;locus_tag=LU604_RS23690;product=TraI domain-containing protein;protein_id=WP_233479408.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4475115 4475267 . - . ID=gene-LU604_RS23695;Name=LU604_RS23695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23695;old_locus_tag=LU604_23695 NZ_CP089942.1 Protein Homology CDS 4475115 4475267 . - 0 ID=cds-WP_233479409.1;Parent=gene-LU604_RS23695;Dbxref=Genbank:WP_233479409.1;Name=WP_233479409.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000956455.1;locus_tag=LU604_RS23695;product=Hok/Gef family protein;protein_id=WP_233479409.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4476559 4477368 . - . ID=gene-LU604_RS23700;Name=LU604_RS23700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23700;old_locus_tag=LU604_23700 NZ_CP089942.1 Protein Homology CDS 4476559 4477368 . - 0 ID=cds-WP_233479410.1;Parent=gene-LU604_RS23700;Dbxref=Genbank:WP_233479410.1;Name=WP_233479410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191525.1;locus_tag=LU604_RS23700;product=DUF4225 domain-containing protein;protein_id=WP_233479410.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4478071 4478337 . + . ID=gene-LU604_RS23705;Name=LU604_RS23705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23705;old_locus_tag=LU604_23705 NZ_CP089942.1 Protein Homology CDS 4478071 4478337 . + 0 ID=cds-WP_233479411.1;Parent=gene-LU604_RS23705;Dbxref=Genbank:WP_233479411.1;Name=WP_233479411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228776.1;locus_tag=LU604_RS23705;product=hypothetical protein;protein_id=WP_233479411.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4478425 4478766 . + . ID=gene-LU604_RS23710;Name=LU604_RS23710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23710;old_locus_tag=LU604_23710;partial=true;pseudo=true;start_range=.,4478425 NZ_CP089942.1 Protein Homology CDS 4478425 4478766 . + 0 ID=cds-LU604_RS23710;Parent=gene-LU604_RS23710;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020704.2;locus_tag=LU604_RS23710;partial=true;product=AAA family ATPase;pseudo=true;start_range=.,4478425;transl_table=11 NZ_CP089942.1 RefSeq gene 4478801 4479841 . - . ID=gene-LU604_RS23715;Name=LU604_RS23715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23715;old_locus_tag=LU604_23715 NZ_CP089942.1 Protein Homology CDS 4478801 4479841 . - 0 ID=cds-WP_233479095.1-2;Parent=gene-LU604_RS23715;Dbxref=Genbank:WP_233479095.1;Name=WP_233479095.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS23715;product=IS481 family transposase;protein_id=WP_233479095.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4480017 4480271 . + . ID=gene-LU604_RS23720;Name=LU604_RS23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23720;old_locus_tag=LU604_23720 NZ_CP089942.1 Protein Homology CDS 4480017 4480271 . + 0 ID=cds-WP_233479453.1;Parent=gene-LU604_RS23720;Dbxref=Genbank:WP_233479453.1;Name=WP_233479453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001378032.1;locus_tag=LU604_RS23720;product=peptide transporter;protein_id=WP_233479453.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4480271 4480558 . + . ID=gene-LU604_RS23725;Name=LU604_RS23725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23725;old_locus_tag=LU604_23725 NZ_CP089942.1 Protein Homology CDS 4480271 4480558 . + 0 ID=cds-WP_233479452.1;Parent=gene-LU604_RS23725;Dbxref=Genbank:WP_233479452.1;Name=WP_233479452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014333818.1;locus_tag=LU604_RS23725;product=ribbon-helix-helix domain-containing protein;protein_id=WP_233479452.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4480815 4480937 . - . ID=gene-LU604_RS23730;Name=LU604_RS23730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23730;old_locus_tag=LU604_23730;partial=true;pseudo=true;start_range=.,4480815 NZ_CP089942.1 Protein Homology CDS 4480815 4480937 . - 0 ID=cds-LU604_RS23730;Parent=gene-LU604_RS23730;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011479717.1;locus_tag=LU604_RS23730;partial=true;product=DUF4158 domain-containing protein;pseudo=true;start_range=.,4480815;transl_table=11 NZ_CP089942.1 RefSeq gene 4480964 4481632 . - . ID=gene-LU604_RS23735;Name=LU604_RS23735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23735;old_locus_tag=LU604_23735 NZ_CP089942.1 GeneMarkS-2+ CDS 4480964 4481632 . - 0 ID=cds-WP_233479451.1;Parent=gene-LU604_RS23735;Dbxref=Genbank:WP_233479451.1;Name=WP_233479451.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS23735;product=GNAT family protein;protein_id=WP_233479451.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4481629 4483503 . - . ID=gene-LU604_RS23740;Name=LU604_RS23740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23740;old_locus_tag=LU604_23740 NZ_CP089942.1 GeneMarkS-2+ CDS 4481629 4483503 . - 0 ID=cds-WP_233479450.1;Parent=gene-LU604_RS23740;Dbxref=Genbank:WP_233479450.1;Name=WP_233479450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS23740;product=hypothetical protein;protein_id=WP_233479450.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4483425 4484096 . - . ID=gene-LU604_RS23745;Name=LU604_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23745;old_locus_tag=LU604_23745 NZ_CP089942.1 Protein Homology CDS 4483425 4484096 . - 0 ID=cds-WP_233479449.1;Parent=gene-LU604_RS23745;Dbxref=Genbank:WP_233479449.1;Name=WP_233479449.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012512.2;locus_tag=LU604_RS23745;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_233479449.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4484629 4484802 . + . ID=gene-LU604_RS23750;Name=LU604_RS23750;end_range=4484802,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23750;old_locus_tag=LU604_23750;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4484629 4484802 . + 0 ID=cds-LU604_RS23750;Parent=gene-LU604_RS23750;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4484802,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707455.1;locus_tag=LU604_RS23750;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4484826 4486025 . + . ID=gene-LU604_RS23755;Name=LU604_RS23755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23755;old_locus_tag=LU604_23755;pseudo=true NZ_CP089942.1 Protein Homology CDS 4484826 4486025 . + 0 ID=cds-LU604_RS23755;Parent=gene-LU604_RS23755;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS23755;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4486486 4486872 . - . ID=gene-LU604_RS23760;Name=LU604_RS23760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23760;old_locus_tag=LU604_23760 NZ_CP089942.1 Protein Homology CDS 4486486 4486872 . - 0 ID=cds-WP_233479448.1;Parent=gene-LU604_RS23760;Dbxref=Genbank:WP_233479448.1;Name=WP_233479448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122240.1;locus_tag=LU604_RS23760;product=VapC toxin family PIN domain ribonuclease;protein_id=WP_233479448.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4486869 4487075 . - . ID=gene-LU604_RS23765;Name=LU604_RS23765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23765;old_locus_tag=LU604_23765 NZ_CP089942.1 Protein Homology CDS 4486869 4487075 . - 0 ID=cds-WP_020322907.1;Parent=gene-LU604_RS23765;Dbxref=Genbank:WP_020322907.1;Name=WP_020322907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006707089.1;locus_tag=LU604_RS23765;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_020322907.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4487424 4488423 . + . ID=gene-LU604_RS23770;Name=LU604_RS23770;end_range=4488423,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23770;old_locus_tag=LU604_23770;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4487424 4488423 . + 0 ID=cds-LU604_RS23770;Parent=gene-LU604_RS23770;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4488423,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS23770;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4488937 4489633 . + . ID=gene-LU604_RS23775;Name=LU604_RS23775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23775;old_locus_tag=LU604_23775 NZ_CP089942.1 Protein Homology CDS 4488937 4489190 . + 0 ID=cds-WP_233479447.1;Parent=gene-LU604_RS23775;Dbxref=Genbank:WP_233479447.1;Name=WP_233479447.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS23775;product=IS1 family transposase;protein_id=WP_233479447.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 4489189 4489633 . + 1 ID=cds-WP_233479447.1;Parent=gene-LU604_RS23775;Dbxref=Genbank:WP_233479447.1;Name=WP_233479447.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS23775;product=IS1 family transposase;protein_id=WP_233479447.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4489641 4491509 . - . ID=gene-LU604_RS23780;Name=LU604_RS23780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23780;old_locus_tag=LU604_23780 NZ_CP089942.1 GeneMarkS-2+ CDS 4489641 4491509 . - 0 ID=cds-WP_233479446.1;Parent=gene-LU604_RS23780;Dbxref=Genbank:WP_233479446.1;Name=WP_233479446.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS23780;product=hypothetical protein;protein_id=WP_233479446.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4491528 4492748 . - . ID=gene-LU604_RS23785;Name=LU604_RS23785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23785;old_locus_tag=LU604_23785 NZ_CP089942.1 GeneMarkS-2+ CDS 4491528 4492748 . - 0 ID=cds-WP_233479445.1;Parent=gene-LU604_RS23785;Dbxref=Genbank:WP_233479445.1;Name=WP_233479445.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS23785;product=hypothetical protein;protein_id=WP_233479445.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4493009 4493927 . - . ID=gene-LU604_RS23790;Name=LU604_RS23790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23790;old_locus_tag=LU604_23790;pseudo=true NZ_CP089942.1 Protein Homology CDS 4493009 4493927 . - 0 ID=cds-LU604_RS23790;Parent=gene-LU604_RS23790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=LU604_RS23790;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4494209 4494864 . - . ID=gene-LU604_RS23795;Name=LU604_RS23795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23795;old_locus_tag=LU604_23795;pseudo=true NZ_CP089942.1 Protein Homology CDS 4494209 4494864 . - 0 ID=cds-LU604_RS23795;Parent=gene-LU604_RS23795;Note=frameshifted%3B internal stop;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS23795;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4494873 4494998 . - . ID=gene-LU604_RS23800;Name=LU604_RS23800;end_range=4494998,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23800;old_locus_tag=LU604_23800;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4494873 4494998 . - 0 ID=cds-LU604_RS23800;Parent=gene-LU604_RS23800;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4494998,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322936.1;locus_tag=LU604_RS23800;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4494977 4495102 . - . ID=gene-LU604_RS23805;Name=LU604_RS23805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23805;old_locus_tag=LU604_23805;partial=true;pseudo=true;start_range=.,4494977 NZ_CP089942.1 Protein Homology CDS 4494977 4495102 . - 0 ID=cds-LU604_RS23805;Parent=gene-LU604_RS23805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU604_RS23805;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4494977;transl_table=11 NZ_CP089942.1 RefSeq gene 4495204 4496253 . - . ID=gene-LU604_RS23810;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=LU604_RS23810;old_locus_tag=LU604_23810 NZ_CP089942.1 Protein Homology CDS 4495204 4496253 . - 0 ID=cds-WP_233479444.1;Parent=gene-LU604_RS23810;Dbxref=Genbank:WP_233479444.1;Name=WP_233479444.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322916.1;locus_tag=LU604_RS23810;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=WP_233479444.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4496240 4497190 . - . ID=gene-LU604_RS23815;Name=LU604_RS23815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23815;old_locus_tag=LU604_23815 NZ_CP089942.1 Protein Homology CDS 4496240 4497190 . - 0 ID=cds-WP_020322918.1;Parent=gene-LU604_RS23815;Dbxref=Genbank:WP_020322918.1;Name=WP_020322918.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040195.1;locus_tag=LU604_RS23815;product=hypothetical protein;protein_id=WP_020322918.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4497187 4498758 . - . ID=gene-LU604_RS23820;Name=LU604_RS23820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23820;old_locus_tag=LU604_23820 NZ_CP089942.1 Protein Homology CDS 4497187 4498758 . - 0 ID=cds-WP_233479443.1;Parent=gene-LU604_RS23820;Dbxref=Genbank:WP_233479443.1;Name=WP_233479443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322919.1;locus_tag=LU604_RS23820;product=hypothetical protein;protein_id=WP_233479443.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4498810 4499682 . - . ID=gene-LU604_RS23825;Name=LU604_RS23825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23825;old_locus_tag=LU604_23825 NZ_CP089942.1 Protein Homology CDS 4498810 4499682 . - 0 ID=cds-WP_233479442.1;Parent=gene-LU604_RS23825;Dbxref=Genbank:WP_233479442.1;Name=WP_233479442.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322920.1;locus_tag=LU604_RS23825;product=polyprenyl synthetase family protein;protein_id=WP_233479442.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4499941 4501254 . - . ID=gene-LU604_RS23830;Name=LU604_RS23830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23830;old_locus_tag=LU604_23830 NZ_CP089942.1 Protein Homology CDS 4499941 4501254 . - 0 ID=cds-WP_233479441.1;Parent=gene-LU604_RS23830;Dbxref=Genbank:WP_233479441.1;Name=WP_233479441.1;Ontology_term=GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322921.1;locus_tag=LU604_RS23830;product=cytochrome P450;protein_id=WP_233479441.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4501319 4502155 . - . ID=gene-LU604_RS23835;Name=LU604_RS23835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23835;old_locus_tag=LU604_23835 NZ_CP089942.1 Protein Homology CDS 4501319 4502155 . - 0 ID=cds-WP_233479440.1;Parent=gene-LU604_RS23835;Dbxref=Genbank:WP_233479440.1;Name=WP_233479440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322922.1;locus_tag=LU604_RS23835;product=SDR family oxidoreductase;protein_id=WP_233479440.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4502152 4502421 . - . ID=gene-LU604_RS23840;Name=LU604_RS23840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23840;old_locus_tag=LU604_23840 NZ_CP089942.1 Protein Homology CDS 4502152 4502421 . - 0 ID=cds-WP_233479439.1;Parent=gene-LU604_RS23840;Dbxref=Genbank:WP_233479439.1;Name=WP_233479439.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018595.2;locus_tag=LU604_RS23840;product=ferredoxin;protein_id=WP_233479439.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4502423 4503724 . - . ID=gene-LU604_RS23845;Name=LU604_RS23845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23845;old_locus_tag=LU604_23845 NZ_CP089942.1 Protein Homology CDS 4502423 4503724 . - 0 ID=cds-WP_233481422.1;Parent=gene-LU604_RS23845;Dbxref=Genbank:WP_233481422.1;Name=WP_233481422.1;Ontology_term=GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322924.1;locus_tag=LU604_RS23845;product=cytochrome P450;protein_id=WP_233481422.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4503809 4505011 . - . ID=gene-LU604_RS23850;Name=LU604_RS23850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23850;old_locus_tag=LU604_23850 NZ_CP089942.1 Protein Homology CDS 4503809 4505011 . - 0 ID=cds-WP_020322925.1;Parent=gene-LU604_RS23850;Dbxref=Genbank:WP_020322925.1;Name=WP_020322925.1;Ontology_term=GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: protein motif:HMM:NF012296.2;locus_tag=LU604_RS23850;product=cytochrome P450;protein_id=WP_020322925.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4505004 4506263 . - . ID=gene-LU604_RS23855;Name=LU604_RS23855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23855;old_locus_tag=LU604_23855 NZ_CP089942.1 Protein Homology CDS 4505004 4506263 . - 0 ID=cds-WP_233479437.1;Parent=gene-LU604_RS23855;Dbxref=Genbank:WP_233479437.1;Name=WP_233479437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322926.1;locus_tag=LU604_RS23855;product=cytochrome P450;protein_id=WP_233479437.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4507026 4507253 . + . ID=gene-LU604_RS23860;Name=LU604_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23860;old_locus_tag=LU604_23860 NZ_CP089942.1 Protein Homology CDS 4507026 4507253 . + 0 ID=cds-WP_071598894.1;Parent=gene-LU604_RS23860;Dbxref=Genbank:WP_071598894.1;Name=WP_071598894.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF013646.2;locus_tag=LU604_RS23860;product=FAD-dependent oxidoreductase;protein_id=WP_071598894.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4507636 4508193 . + . ID=gene-LU604_RS23865;Name=LU604_RS23865;end_range=4508193,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23865;old_locus_tag=LU604_23865;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4507636 4508193 . + 0 ID=cds-LU604_RS23865;Parent=gene-LU604_RS23865;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4508193,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001744774.1;locus_tag=LU604_RS23865;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4508476 4508766 . - . ID=gene-LU604_RS23870;Name=LU604_RS23870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23870;old_locus_tag=LU604_23870 NZ_CP089942.1 Protein Homology CDS 4508476 4508766 . - 0 ID=cds-WP_232426838.1;Parent=gene-LU604_RS23870;Dbxref=Genbank:WP_232426838.1;Name=WP_232426838.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014417.2;locus_tag=LU604_RS23870;product=hypothetical protein;protein_id=WP_232426838.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4508789 4509986 . - . ID=gene-LU604_RS23875;Name=LU604_RS23875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23875;old_locus_tag=LU604_23875;pseudo=true NZ_CP089942.1 Protein Homology CDS 4508789 4509986 . - 0 ID=cds-LU604_RS23875;Parent=gene-LU604_RS23875;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU604_RS23875;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4510112 4510543 . - . ID=gene-LU604_RS23880;Name=LU604_RS23880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23880;old_locus_tag=LU604_23880 NZ_CP089942.1 Protein Homology CDS 4510112 4510543 . - 0 ID=cds-WP_233479436.1;Parent=gene-LU604_RS23880;Dbxref=Genbank:WP_233479436.1;Name=WP_233479436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322931.1;locus_tag=LU604_RS23880;product=hypothetical protein;protein_id=WP_233479436.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4510540 4511241 . - . ID=gene-LU604_RS23885;Name=LU604_RS23885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23885;old_locus_tag=LU604_23885 NZ_CP089942.1 Protein Homology CDS 4510540 4511241 . - 0 ID=cds-WP_233479435.1;Parent=gene-LU604_RS23885;Dbxref=Genbank:WP_233479435.1;Name=WP_233479435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539164.1;locus_tag=LU604_RS23885;product=hypothetical protein;protein_id=WP_233479435.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4511411 4511856 . + . ID=gene-LU604_RS23890;Name=LU604_RS23890;end_range=4511856,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23890;old_locus_tag=LU604_23890;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4511411 4511856 . + 0 ID=cds-LU604_RS23890;Parent=gene-LU604_RS23890;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4511856,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098917.1;locus_tag=LU604_RS23890;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4511949 4512127 . + . ID=gene-LU604_RS23895;Name=LU604_RS23895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23895;old_locus_tag=LU604_23895;pseudo=true NZ_CP089942.1 Protein Homology CDS 4511949 4512127 . + 0 ID=cds-LU604_RS23895;Parent=gene-LU604_RS23895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322936.1;locus_tag=LU604_RS23895;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4512136 4513335 . + . ID=gene-LU604_RS23900;Name=LU604_RS23900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23900;old_locus_tag=LU604_23900 NZ_CP089942.1 Protein Homology CDS 4512136 4513335 . + 0 ID=cds-WP_233478723.1-7;Parent=gene-LU604_RS23900;Dbxref=Genbank:WP_233478723.1;Name=WP_233478723.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS23900;product=IS91 family transposase;protein_id=WP_233478723.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4513625 4513855 . + . ID=gene-LU604_RS23905;Name=LU604_RS23905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23905;old_locus_tag=LU604_23905 NZ_CP089942.1 GeneMarkS-2+ CDS 4513625 4513855 . + 0 ID=cds-WP_046371992.1;Parent=gene-LU604_RS23905;Dbxref=Genbank:WP_046371992.1;Name=WP_046371992.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS23905;product=hypothetical protein;protein_id=WP_046371992.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4513989 4514180 . + . ID=gene-LU604_RS23910;Name=LU604_RS23910;end_range=4514180,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23910;old_locus_tag=LU604_23910;partial=true;pseudo=true;start_range=.,4513989 NZ_CP089942.1 Protein Homology CDS 4513989 4514180 . + 0 ID=cds-LU604_RS23910;Parent=gene-LU604_RS23910;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4514180,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS23910;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,4513989;transl_table=11 NZ_CP089942.1 RefSeq gene 4514383 4514550 . + . ID=gene-LU604_RS23915;Name=LU604_RS23915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23915;old_locus_tag=LU604_23915 NZ_CP089942.1 GeneMarkS-2+ CDS 4514383 4514550 . + 0 ID=cds-WP_233479434.1;Parent=gene-LU604_RS23915;Dbxref=Genbank:WP_233479434.1;Name=WP_233479434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS23915;product=hypothetical protein;protein_id=WP_233479434.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4514629 4516017 . - . ID=gene-LU604_RS23920;Name=LU604_RS23920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23920;old_locus_tag=LU604_23920 NZ_CP089942.1 Protein Homology CDS 4514629 4516017 . - 0 ID=cds-WP_233479433.1;Parent=gene-LU604_RS23920;Dbxref=Genbank:WP_233479433.1;Name=WP_233479433.1;Ontology_term=GO:0030245,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=cellulose catabolic process|0030245||IEA;inference=COORDINATES: protein motif:HMM:NF013504.2;locus_tag=LU604_RS23920;product=glycoside hydrolase family 6 protein;protein_id=WP_233479433.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4516146 4516979 . - . ID=gene-LU604_RS23925;Name=LU604_RS23925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23925;old_locus_tag=LU604_23925;pseudo=true NZ_CP089942.1 Protein Homology CDS 4516146 4516979 . - 0 ID=cds-LU604_RS23925;Parent=gene-LU604_RS23925;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011410900.1;locus_tag=LU604_RS23925;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4517252 4517997 . - . ID=gene-LU604_RS23930;Name=LU604_RS23930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23930;old_locus_tag=LU604_23930;pseudo=true NZ_CP089942.1 Protein Homology CDS 4517252 4517997 . - 0 ID=cds-LU604_RS23930;Parent=gene-LU604_RS23930;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU604_RS23930;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4519038 4519436 . + . ID=gene-LU604_RS23935;Name=LU604_RS23935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23935;old_locus_tag=LU604_23935 NZ_CP089942.1 Protein Homology CDS 4519038 4519436 . + 0 ID=cds-WP_233479432.1;Parent=gene-LU604_RS23935;Dbxref=Genbank:WP_233479432.1;Name=WP_233479432.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016255.2;locus_tag=LU604_RS23935;product=ProQ/FINO family protein;protein_id=WP_233479432.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4519623 4519835 . + . ID=gene-LU604_RS23940;Name=LU604_RS23940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23940;old_locus_tag=LU604_23940 NZ_CP089942.1 GeneMarkS-2+ CDS 4519623 4519835 . + 0 ID=cds-WP_233479431.1;Parent=gene-LU604_RS23940;Dbxref=Genbank:WP_233479431.1;Name=WP_233479431.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS23940;product=hypothetical protein;protein_id=WP_233479431.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4519914 4520954 . + . ID=gene-LU604_RS23945;Name=LU604_RS23945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23945;old_locus_tag=LU604_23945 NZ_CP089942.1 Protein Homology CDS 4519914 4520954 . + 0 ID=cds-WP_233478989.1-3;Parent=gene-LU604_RS23945;Dbxref=Genbank:WP_233478989.1;Name=WP_233478989.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS23945;product=IS481 family transposase;protein_id=WP_233478989.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4521157 4521973 . - . ID=gene-LU604_RS23950;Name=LU604_RS23950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23950;old_locus_tag=LU604_23950;pseudo=true NZ_CP089942.1 Protein Homology CDS 4521157 4521973 . - 0 ID=cds-LU604_RS23950;Parent=gene-LU604_RS23950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862880.1;locus_tag=LU604_RS23950;product=DUF4225 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4522099 4523219 . - . ID=gene-LU604_RS23955;Name=LU604_RS23955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23955;old_locus_tag=LU604_23955 NZ_CP089942.1 Protein Homology CDS 4522961 4523219 . - 0 ID=cds-WP_233481423.1;Parent=gene-LU604_RS23955;Dbxref=Genbank:WP_233481423.1;Name=WP_233481423.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS23955;product=IS3 family transposase;protein_id=WP_233481423.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 4522099 4522961 . - 2 ID=cds-WP_233481423.1;Parent=gene-LU604_RS23955;Dbxref=Genbank:WP_233481423.1;Name=WP_233481423.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS23955;product=IS3 family transposase;protein_id=WP_233481423.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4523345 4524436 . + . ID=gene-LU604_RS23960;Name=LU604_RS23960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23960;old_locus_tag=LU604_23960 NZ_CP089942.1 Protein Homology CDS 4523345 4524436 . + 0 ID=cds-WP_233479429.1;Parent=gene-LU604_RS23960;Dbxref=Genbank:WP_233479429.1;Name=WP_233479429.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558175.1;locus_tag=LU604_RS23960;product=IS91 family transposase;protein_id=WP_233479429.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4525501 4525793 . - . ID=gene-LU604_RS23965;Name=LU604_RS23965;end_range=4525793,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23965;old_locus_tag=LU604_23965;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4525501 4525793 . - 0 ID=cds-LU604_RS23965;Parent=gene-LU604_RS23965;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4525793,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002225475.1;locus_tag=LU604_RS23965;partial=true;product=incFII family plasmid replication initiator RepA;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4526641 4531269 . - . ID=gene-LU604_RS23970;Name=LU604_RS23970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23970;old_locus_tag=LU604_23970 NZ_CP089942.1 GeneMarkS-2+ CDS 4526641 4531269 . - 0 ID=cds-WP_233479428.1;Parent=gene-LU604_RS23970;Dbxref=Genbank:WP_233479428.1;Name=WP_233479428.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS23970;product=hypothetical protein;protein_id=WP_233479428.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4531776 4532472 . - . ID=gene-LU604_RS23975;Name=LU604_RS23975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23975;old_locus_tag=LU604_23975;pseudo=true NZ_CP089942.1 Protein Homology CDS 4531776 4532472 . - 0 ID=cds-LU604_RS23975;Parent=gene-LU604_RS23975;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=LU604_RS23975;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4532961 4533227 . + . ID=gene-LU604_RS23980;Name=LU604_RS23980;end_range=4533227,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23980;old_locus_tag=LU604_23980;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4532961 4533227 . + 0 ID=cds-LU604_RS23980;Parent=gene-LU604_RS23980;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4533227,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS23980;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4533312 4534244 . + . ID=gene-LU604_RS23985;Name=LU604_RS23985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS23985;old_locus_tag=LU604_23985 NZ_CP089942.1 Protein Homology CDS 4533312 4534244 . + 0 ID=cds-WP_267938699.1;Parent=gene-LU604_RS23985;Dbxref=Genbank:WP_267938699.1;Name=WP_267938699.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU604_RS23985;product=IS91 family transposase;protein_id=WP_267938699.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4534201 4534536 . + . ID=gene-LU604_RS27105;Name=LU604_RS27105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27105 NZ_CP089942.1 Protein Homology CDS 4534201 4534536 . + 0 ID=cds-WP_233481440.1-2;Parent=gene-LU604_RS27105;Dbxref=Genbank:WP_233481440.1;Name=WP_233481440.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS27105;product=hypothetical protein;protein_id=WP_233481440.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4534673 4535625 . + . ID=gene-LU604_RS23990;Name=LU604_RS23990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23990;old_locus_tag=LU604_23990;partial=true;pseudo=true;start_range=.,4534673 NZ_CP089942.1 Protein Homology CDS 4534673 4535625 . + 0 ID=cds-LU604_RS23990;Parent=gene-LU604_RS23990;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343018.1;locus_tag=LU604_RS23990;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,4534673;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4535800 4536613 . - . ID=gene-LU604_RS23995;Name=LU604_RS23995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS23995;old_locus_tag=LU604_23995;pseudo=true NZ_CP089942.1 Protein Homology CDS 4535800 4536613 . - 0 ID=cds-LU604_RS23995;Parent=gene-LU604_RS23995;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191525.1;locus_tag=LU604_RS23995;product=DUF4225 domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4536908 4537351 . - . ID=gene-LU604_RS24000;Name=LU604_RS24000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24000;old_locus_tag=LU604_24000 NZ_CP089942.1 Protein Homology CDS 4536908 4537351 . - 0 ID=cds-WP_233479427.1;Parent=gene-LU604_RS24000;Dbxref=Genbank:WP_233479427.1;Name=WP_233479427.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: protein motif:HMM:NF013377.2;locus_tag=LU604_RS24000;product=trehalase family glycosidase;protein_id=WP_233479427.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4537477 4537776 . - . ID=gene-LU604_RS24005;Name=LU604_RS24005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24005;old_locus_tag=LU604_24005 NZ_CP089942.1 Protein Homology CDS 4537477 4537776 . - 0 ID=cds-WP_233479426.1;Parent=gene-LU604_RS24005;Dbxref=Genbank:WP_233479426.1;Name=WP_233479426.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: protein motif:HMM:NF013377.2;locus_tag=LU604_RS24005;product=trehalase family glycosidase;protein_id=WP_233479426.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4538791 4539891 . + . ID=gene-LU604_RS24010;Name=LU604_RS24010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24010;old_locus_tag=LU604_24010;pseudo=true NZ_CP089942.1 Protein Homology CDS 4538791 4539891 . + 0 ID=cds-LU604_RS24010;Parent=gene-LU604_RS24010;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200420.1;locus_tag=LU604_RS24010;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4540012 4540908 . + . ID=gene-LU604_RS24015;Name=LU604_RS24015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24015;old_locus_tag=LU604_24015 NZ_CP089942.1 Protein Homology CDS 4540012 4540908 . + 0 ID=cds-WP_233481424.1;Parent=gene-LU604_RS24015;Dbxref=Genbank:WP_233481424.1;Name=WP_233481424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322952.1;locus_tag=LU604_RS24015;product=LysR family transcriptional regulator;protein_id=WP_233481424.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4540941 4541720 . - . ID=gene-LU604_RS24020;Name=LU604_RS24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24020;old_locus_tag=LU604_24020 NZ_CP089942.1 Protein Homology CDS 4540941 4541720 . - 0 ID=cds-WP_233479424.1;Parent=gene-LU604_RS24020;Dbxref=Genbank:WP_233479424.1;Name=WP_233479424.1;Ontology_term=GO:0003725;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442751.1;locus_tag=LU604_RS24020;product=Sua5/YciO/YrdC/YwlC family protein;protein_id=WP_233479424.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4542112 4544235 . - . ID=gene-LU604_RS24025;Name=LU604_RS24025;end_range=4544235,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24025;old_locus_tag=LU604_24025;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4542112 4544235 . - 0 ID=cds-LU604_RS24025;Parent=gene-LU604_RS24025;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4544235,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004173425.1;locus_tag=LU604_RS24025;partial=true;product=EAL domain-containing protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4544521 4545024 . - . ID=gene-LU604_RS24030;Name=LU604_RS24030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24030;old_locus_tag=LU604_24030 NZ_CP089942.1 Protein Homology CDS 4544521 4545024 . - 0 ID=cds-WP_233481425.1;Parent=gene-LU604_RS24030;Dbxref=Genbank:WP_233481425.1;Name=WP_233481425.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU604_RS24030;product=IS1 family transposase;protein_id=WP_233481425.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4544943 4545218 . - . ID=gene-LU604_RS24035;Name=LU604_RS24035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24035;old_locus_tag=LU604_24035 NZ_CP089942.1 Protein Homology CDS 4544943 4545218 . - 0 ID=cds-WP_016192850.1-4;Parent=gene-LU604_RS24035;Dbxref=Genbank:WP_016192850.1;Name=WP_016192850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU604_RS24035;product=transposase;protein_id=WP_016192850.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4545896 4547095 . + . ID=gene-LU604_RS24040;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=LU604_RS24040;old_locus_tag=LU604_24040 NZ_CP089942.1 Protein Homology CDS 4545896 4547095 . + 0 ID=cds-WP_020322954.1;Parent=gene-LU604_RS24040;Dbxref=Genbank:WP_020322954.1;Name=WP_020322954.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160384.1;locus_tag=LU604_RS24040;product=peptide antibiotic transporter SbmA;protein_id=WP_020322954.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4547154 4547306 . - . ID=gene-LU604_RS24045;Name=LU604_RS24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24045;old_locus_tag=LU604_24045 NZ_CP089942.1 Protein Homology CDS 4547154 4547306 . - 0 ID=cds-WP_233480872.1;Parent=gene-LU604_RS24045;Dbxref=Genbank:WP_233480872.1;Name=WP_233480872.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: protein motif:HMM:NF014754.2;locus_tag=LU604_RS24045;product=DAK2 domain-containing protein;protein_id=WP_233480872.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4547299 4547469 . + . ID=gene-LU604_RS24050;Name=LU604_RS24050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24050;old_locus_tag=LU604_24050 NZ_CP089942.1 GeneMarkS-2+ CDS 4547299 4547469 . + 0 ID=cds-WP_233479422.1;Parent=gene-LU604_RS24050;Dbxref=Genbank:WP_233479422.1;Name=WP_233479422.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS24050;product=hypothetical protein;protein_id=WP_233479422.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4547479 4548372 . - . ID=gene-LU604_RS24055;Name=LU604_RS24055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24055;old_locus_tag=LU604_24055 NZ_CP089942.1 Protein Homology CDS 4547479 4548372 . - 0 ID=cds-WP_233479421.1;Parent=gene-LU604_RS24055;Dbxref=Genbank:WP_233479421.1;Name=WP_233479421.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: protein motif:HMM:NF014753.2;locus_tag=LU604_RS24055;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_233479421.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4548366 4548554 . - . ID=gene-LU604_RS24060;Name=LU604_RS24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24060;old_locus_tag=LU604_24060 NZ_CP089942.1 GeneMarkS-2+ CDS 4548366 4548554 . - 0 ID=cds-WP_233479420.1;Parent=gene-LU604_RS24060;Dbxref=Genbank:WP_233479420.1;Name=WP_233479420.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS24060;product=hypothetical protein;protein_id=WP_233479420.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4549155 4550014 . - . ID=gene-LU604_RS24065;Name=LU604_RS24065;end_range=4550014,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24065;old_locus_tag=LU604_24065;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4549155 4550014 . - 0 ID=cds-LU604_RS24065;Parent=gene-LU604_RS24065;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007165,GO:0016020;end_range=4550014,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004171055.1;locus_tag=LU604_RS24065;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4550201 4550594 . - . ID=gene-LU604_RS24070;Name=LU604_RS24070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24070;old_locus_tag=LU604_24070;partial=true;pseudo=true;start_range=.,4550201 NZ_CP089942.1 Protein Homology CDS 4550201 4550594 . - 0 ID=cds-LU604_RS24070;Parent=gene-LU604_RS24070;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000094721.1;locus_tag=LU604_RS24070;partial=true;product=PAS domain-containing protein;pseudo=true;start_range=.,4550201;transl_table=11 NZ_CP089942.1 RefSeq gene 4550886 4552184 . - . ID=gene-LU604_RS24075;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=LU604_RS24075;old_locus_tag=LU604_24075 NZ_CP089942.1 Protein Homology CDS 4550886 4552184 . - 0 ID=cds-WP_020322961.1;Parent=gene-LU604_RS24075;Dbxref=Genbank:WP_020322961.1;Name=WP_020322961.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014595076.1;locus_tag=LU604_RS24075;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_020322961.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4552681 4554636 . + . ID=gene-LU604_RS24080;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=LU604_RS24080;old_locus_tag=LU604_24080 NZ_CP089942.1 Protein Homology CDS 4552681 4554636 . + 0 ID=cds-WP_233479419.1;Parent=gene-LU604_RS24080;Dbxref=Genbank:WP_233479419.1;Name=WP_233479419.1;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322963.1;locus_tag=LU604_RS24080;product=acetate--CoA ligase;protein_id=WP_233479419.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4554699 4555244 . - . ID=gene-LU604_RS24085;Name=LU604_RS24085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24085;old_locus_tag=LU604_24085 NZ_CP089942.1 Protein Homology CDS 4554699 4555244 . - 0 ID=cds-WP_040465519.1;Parent=gene-LU604_RS24085;Dbxref=Genbank:WP_040465519.1;Name=WP_040465519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160394.1;locus_tag=LU604_RS24085;product=YfaZ family outer membrane protein;protein_id=WP_040465519.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4555541 4555780 . - . ID=gene-LU604_RS24090;Name=LU604_RS24090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24090;old_locus_tag=LU604_24090;partial=true;pseudo=true;start_range=.,4555541 NZ_CP089942.1 Protein Homology CDS 4555541 4555780 . - 0 ID=cds-LU604_RS24090;Parent=gene-LU604_RS24090;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160396.1;locus_tag=LU604_RS24090;partial=true;product=LrgB family protein;pseudo=true;start_range=.,4555541;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4555716 4556123 . - . ID=gene-LU604_RS24095;Name=LU604_RS24095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24095;old_locus_tag=LU604_24095;pseudo=true NZ_CP089942.1 Protein Homology CDS 4555716 4556123 . - 0 ID=cds-LU604_RS24095;Parent=gene-LU604_RS24095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080101.1;locus_tag=LU604_RS24095;product=CidA/LrgA family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4556228 4557160 . + . ID=gene-LU604_RS24100;Name=LU604_RS24100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24100;old_locus_tag=LU604_24100 NZ_CP089942.1 Protein Homology CDS 4556228 4557160 . + 0 ID=cds-WP_267938700.1;Parent=gene-LU604_RS24100;Dbxref=Genbank:WP_267938700.1;Name=WP_267938700.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU604_RS24100;product=IS91 family transposase;protein_id=WP_267938700.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4557117 4557452 . + . ID=gene-LU604_RS27110;Name=LU604_RS27110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27110 NZ_CP089942.1 Protein Homology CDS 4557117 4557452 . + 0 ID=cds-WP_233481440.1-3;Parent=gene-LU604_RS27110;Dbxref=Genbank:WP_233481440.1;Name=WP_233481440.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS27110;product=hypothetical protein;protein_id=WP_233481440.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4557746 4558639 . + . ID=gene-LU604_RS24105;Name=LU604_RS24105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24105;old_locus_tag=LU604_24105;pseudo=true NZ_CP089942.1 Protein Homology CDS 4557746 4558639 . + 0 ID=cds-LU604_RS24105;Parent=gene-LU604_RS24105;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160403.1;locus_tag=LU604_RS24105;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4558703 4560352 . - . ID=gene-LU604_RS24110;Name=LU604_RS24110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24110;old_locus_tag=LU604_24110 NZ_CP089942.1 Protein Homology CDS 4558703 4560352 . - 0 ID=cds-WP_020322968.1;Parent=gene-LU604_RS24110;Dbxref=Genbank:WP_020322968.1;Name=WP_020322968.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;gbkey=CDS;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005271285.1;locus_tag=LU604_RS24110;product=Na+/H+ antiporter;protein_id=WP_020322968.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4560524 4561873 . - . ID=gene-LU604_RS24115;Name=LU604_RS24115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24115;old_locus_tag=LU604_24115 NZ_CP089942.1 Protein Homology CDS 4560524 4561873 . - 0 ID=cds-WP_020322969.1;Parent=gene-LU604_RS24115;Dbxref=Genbank:WP_020322969.1;Name=WP_020322969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=LU604_RS24115;product=NCS2 family permease;protein_id=WP_020322969.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4562146 4563370 . + . ID=gene-LU604_RS24120;Name=LU604_RS24120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24120;old_locus_tag=LU604_24120;pseudo=true NZ_CP089942.1 Protein Homology CDS 4562146 4563370 . + 0 ID=cds-LU604_RS24120;Parent=gene-LU604_RS24120;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS24120;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4563551 4564213 . - . ID=gene-LU604_RS24125;Name=LU604_RS24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24125;old_locus_tag=LU604_24125 NZ_CP089942.1 Protein Homology CDS 4563551 4564213 . - 0 ID=cds-WP_020322971.1;Parent=gene-LU604_RS24125;Dbxref=Genbank:WP_020322971.1;Name=WP_020322971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200393.1;locus_tag=LU604_RS24125;product=glutathione S-transferase;protein_id=WP_020322971.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4564257 4564703 . - . ID=gene-LU604_RS24130;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=pseudogene;locus_tag=LU604_RS24130;old_locus_tag=LU604_24130;pseudo=true NZ_CP089942.1 Protein Homology CDS 4564257 4564703 . - 0 ID=cds-LU604_RS24130;Parent=gene-LU604_RS24130;Note=internal stop;Ontology_term=GO:0006355,GO:0006979,GO:0003677,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008109977.1;locus_tag=LU604_RS24130;product=redox-sensitive transcriptional activator SoxR;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4564848 4565192 . + . ID=gene-LU604_RS24135;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=LU604_RS24135;old_locus_tag=LU604_24135 NZ_CP089942.1 Protein Homology CDS 4564848 4565192 . + 0 ID=cds-WP_233479417.1;Parent=gene-LU604_RS24135;Dbxref=Genbank:WP_233479417.1;Name=WP_233479417.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200391.1;locus_tag=LU604_RS24135;product=superoxide response transcriptional regulator SoxS;protein_id=WP_233479417.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4565478 4565733 . + . ID=gene-LU604_RS24140;Name=LU604_RS24140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24140;old_locus_tag=LU604_24140;pseudo=true NZ_CP089942.1 Protein Homology CDS 4565478 4565733 . + 0 ID=cds-LU604_RS24140;Parent=gene-LU604_RS24140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008109973.1;locus_tag=LU604_RS24140;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4565785 4566738 . - . ID=gene-LU604_RS24145;Name=LU604_RS24145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24145;old_locus_tag=LU604_24145 NZ_CP089942.1 Protein Homology CDS 4565785 4566738 . - 0 ID=cds-WP_233479416.1;Parent=gene-LU604_RS24145;Dbxref=Genbank:WP_233479416.1;Name=WP_233479416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606932.1;locus_tag=LU604_RS24145;product=ATP-grasp fold amidoligase family protein;protein_id=WP_233479416.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4566732 4568003 . - . ID=gene-LU604_RS24150;Name=LU604_RS24150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24150;old_locus_tag=LU604_24150 NZ_CP089942.1 Protein Homology CDS 4566732 4568003 . - 0 ID=cds-WP_233479415.1;Parent=gene-LU604_RS24150;Dbxref=Genbank:WP_233479415.1;Name=WP_233479415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024178.1;locus_tag=LU604_RS24150;product=polysaccharide biosynthesis protein;protein_id=WP_233479415.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4568519 4568914 . + . ID=gene-LU604_RS24155;Name=LU604_RS24155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24155;old_locus_tag=LU604_24155 NZ_CP089942.1 Protein Homology CDS 4568519 4568914 . + 0 ID=cds-WP_233479414.1;Parent=gene-LU604_RS24155;Dbxref=Genbank:WP_233479414.1;Name=WP_233479414.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.2;locus_tag=LU604_RS24155;product=transposase;protein_id=WP_233479414.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4569541 4569723 . + . ID=gene-LU604_RS24160;Name=LU604_RS24160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24160;old_locus_tag=LU604_24160 NZ_CP089942.1 GeneMarkS-2+ CDS 4569541 4569723 . + 0 ID=cds-WP_233481426.1;Parent=gene-LU604_RS24160;Dbxref=Genbank:WP_233481426.1;Name=WP_233481426.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS24160;product=hypothetical protein;protein_id=WP_233481426.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4570809 4570967 . + . ID=gene-LU604_RS24165;Name=LU604_RS24165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24165;old_locus_tag=LU604_24165 NZ_CP089942.1 GeneMarkS-2+ CDS 4570809 4570967 . + 0 ID=cds-WP_232426840.1;Parent=gene-LU604_RS24165;Dbxref=Genbank:WP_232426840.1;Name=WP_232426840.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS24165;product=hypothetical protein;protein_id=WP_232426840.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4571105 4571386 . + . ID=gene-LU604_RS24170;Name=LU604_RS24170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24170;old_locus_tag=LU604_24170 NZ_CP089942.1 GeneMarkS-2+ CDS 4571105 4571386 . + 0 ID=cds-WP_232426841.1;Parent=gene-LU604_RS24170;Dbxref=Genbank:WP_232426841.1;Name=WP_232426841.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS24170;product=DUF535 family protein;protein_id=WP_232426841.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4571469 4571660 . + . ID=gene-LU604_RS27115;Name=LU604_RS27115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27115 NZ_CP089942.1 Protein Homology CDS 4571469 4571660 . + 0 ID=cds-WP_252120248.1;Parent=gene-LU604_RS27115;Dbxref=Genbank:WP_252120248.1;Name=WP_252120248.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016293.2;locus_tag=LU604_RS27115;product=DUF535 family protein;protein_id=WP_252120248.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4571657 4572103 . - . ID=gene-LU604_RS24175;Name=LU604_RS24175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24175;old_locus_tag=LU604_24175 NZ_CP089942.1 Protein Homology CDS 4571657 4572103 . - 0 ID=cds-WP_233479412.1;Parent=gene-LU604_RS24175;Dbxref=Genbank:WP_233479412.1;Name=WP_233479412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322979.1;locus_tag=LU604_RS24175;product=DUF3828 domain-containing protein;protein_id=WP_233479412.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4572236 4572388 . - . ID=gene-LU604_RS24180;Name=LU604_RS24180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24180;old_locus_tag=LU604_24180 NZ_CP089942.1 GeneMarkS-2+ CDS 4572236 4572388 . - 0 ID=cds-WP_161796994.1;Parent=gene-LU604_RS24180;Dbxref=Genbank:WP_161796994.1;Name=WP_161796994.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS24180;product=alpha/beta hydrolase;protein_id=WP_161796994.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4572381 4572869 . - . ID=gene-LU604_RS24185;Name=LU604_RS24185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24185;old_locus_tag=LU604_24185 NZ_CP089942.1 GeneMarkS-2+ CDS 4572381 4572869 . - 0 ID=cds-WP_051124368.1;Parent=gene-LU604_RS24185;Dbxref=Genbank:WP_051124368.1;Name=WP_051124368.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS24185;product=hypothetical protein;protein_id=WP_051124368.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4572965 4573162 . - . ID=gene-LU604_RS24190;Name=LU604_RS24190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24190;old_locus_tag=LU604_24190 NZ_CP089942.1 GeneMarkS-2+ CDS 4572965 4573162 . - 0 ID=cds-WP_020322980.1;Parent=gene-LU604_RS24190;Dbxref=Genbank:WP_020322980.1;Name=WP_020322980.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS24190;product=amidohydrolase;protein_id=WP_020322980.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4573318 4573767 . - . ID=gene-LU604_RS24195;Name=LU604_RS24195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24195;old_locus_tag=LU604_24195 NZ_CP089942.1 Protein Homology CDS 4573318 4573767 . - 0 ID=cds-WP_232426851.1;Parent=gene-LU604_RS24195;Dbxref=Genbank:WP_232426851.1;Name=WP_232426851.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024997.2;locus_tag=LU604_RS24195;product=DDE-type integrase/transposase/recombinase;protein_id=WP_232426851.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4573771 4573965 . - . ID=gene-LU604_RS24200;Name=LU604_RS24200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24200;old_locus_tag=LU604_24200 NZ_CP089942.1 GeneMarkS-2+ CDS 4573771 4573965 . - 0 ID=cds-WP_233481427.1;Parent=gene-LU604_RS24200;Dbxref=Genbank:WP_233481427.1;Name=WP_233481427.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS24200;product=hypothetical protein;protein_id=WP_233481427.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4574397 4575437 . + . ID=gene-LU604_RS24205;Name=LU604_RS24205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24205;old_locus_tag=LU604_24205 NZ_CP089942.1 Protein Homology CDS 4574397 4575437 . + 0 ID=cds-WP_233479095.1-3;Parent=gene-LU604_RS24205;Dbxref=Genbank:WP_233479095.1;Name=WP_233479095.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS24205;product=IS481 family transposase;protein_id=WP_233479095.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4575724 4576446 . - . ID=gene-LU604_RS27120;Name=LU604_RS27120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27120 NZ_CP089942.1 Protein Homology CDS 4575724 4576446 . - 0 ID=cds-WP_267938701.1;Parent=gene-LU604_RS27120;Dbxref=Genbank:WP_267938701.1;Name=WP_267938701.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012307.2;locus_tag=LU604_RS27120;product=reverse transcriptase domain-containing protein;protein_id=WP_267938701.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4576367 4576951 . - . ID=gene-LU604_RS27125;Name=LU604_RS27125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27125 NZ_CP089942.1 Protein Homology CDS 4576367 4576951 . - 0 ID=cds-WP_020322983.1;Parent=gene-LU604_RS27125;Dbxref=Genbank:WP_020322983.1;Name=WP_020322983.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012307.2;locus_tag=LU604_RS27125;product=reverse transcriptase domain-containing protein;protein_id=WP_020322983.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4577504 4578040 . - . ID=gene-LU604_RS24220;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=LU604_RS24220;old_locus_tag=LU604_24220 NZ_CP089942.1 Protein Homology CDS 4577504 4578040 . - 0 ID=cds-WP_020322984.1;Parent=gene-LU604_RS24220;Dbxref=Genbank:WP_020322984.1;Name=WP_020322984.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168322.1;locus_tag=LU604_RS24220;product=single-stranded DNA-binding protein SSB1;protein_id=WP_020322984.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4578343 4581168 . + . ID=gene-LU604_RS24225;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=LU604_RS24225;old_locus_tag=LU604_24225 NZ_CP089942.1 Protein Homology CDS 4578343 4581168 . + 0 ID=cds-WP_233479454.1;Parent=gene-LU604_RS24225;Dbxref=Genbank:WP_233479454.1;Name=WP_233479454.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224582.1;locus_tag=LU604_RS24225;product=excinuclease ABC subunit UvrA;protein_id=WP_233479454.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4581531 4582583 . + . ID=gene-LU604_RS24230;Name=LU604_RS24230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24230;old_locus_tag=LU604_24230 NZ_CP089942.1 Protein Homology CDS 4581531 4582583 . + 0 ID=cds-WP_233479455.1;Parent=gene-LU604_RS24230;Dbxref=Genbank:WP_233479455.1;Name=WP_233479455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322986.1;locus_tag=LU604_RS24230;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_233479455.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4582861 4583161 . - . ID=gene-LU604_RS24235;Name=LU604_RS24235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24235;old_locus_tag=LU604_24235;pseudo=true NZ_CP089942.1 Protein Homology CDS 4582861 4583161 . - 0 ID=cds-LU604_RS24235;Parent=gene-LU604_RS24235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200359.1;locus_tag=LU604_RS24235;product=MmcQ/YjbR family DNA-binding protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4583199 4583611 . - . ID=gene-LU604_RS24240;Name=LU604_RS24240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24240;old_locus_tag=LU604_24240;pseudo=true NZ_CP089942.1 Protein Homology CDS 4583199 4583611 . - 0 ID=cds-LU604_RS24240;Parent=gene-LU604_RS24240;Note=frameshifted;Ontology_term=GO:0008150,GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206303.1;locus_tag=LU604_RS24240;product=secondary thiamine-phosphate synthase enzyme YjbQ;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4583912 4585105 . - . ID=gene-LU604_RS24245;Name=LU604_RS24245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24245;old_locus_tag=LU604_24245 NZ_CP089942.1 Protein Homology CDS 4583912 4585105 . - 0 ID=cds-WP_020322990.1;Parent=gene-LU604_RS24245;Dbxref=Genbank:WP_020322990.1;Name=WP_020322990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418478.1;locus_tag=LU604_RS24245;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=WP_020322990.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4585164 4585766 . - . ID=gene-LU604_RS24250;Name=LU604_RS24250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24250;old_locus_tag=LU604_24250;pseudo=true NZ_CP089942.1 Protein Homology CDS 4585164 4585766 . - 0 ID=cds-LU604_RS24250;Parent=gene-LU604_RS24250;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009092605.1;locus_tag=LU604_RS24250;product=YitT family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4586078 4586488 . - . ID=gene-LU604_RS24255;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS24255;old_locus_tag=LU604_24255;pseudo=true NZ_CP089942.1 Protein Homology CDS 4586078 4586488 . - 0 ID=cds-LU604_RS24255;Parent=gene-LU604_RS24255;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012323117.1;locus_tag=LU604_RS24255;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4586658 4587063 . - . ID=gene-LU604_RS24260;Name=LU604_RS24260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24260;old_locus_tag=LU604_24260;pseudo=true NZ_CP089942.1 Protein Homology CDS 4586658 4587063 . - 0 ID=cds-LU604_RS24260;Parent=gene-LU604_RS24260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008926607.1;locus_tag=LU604_RS24260;product=Lrp/AsnC family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4587246 4587413 . - . ID=gene-LU604_RS24265;Name=LU604_RS24265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24265;old_locus_tag=LU604_24265 NZ_CP089942.1 GeneMarkS-2+ CDS 4587246 4587413 . - 0 ID=cds-WP_233479456.1;Parent=gene-LU604_RS24265;Dbxref=Genbank:WP_233479456.1;Name=WP_233479456.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS24265;product=hypothetical protein;protein_id=WP_233479456.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4587535 4589454 . - . ID=gene-LU604_RS24270;Name=LU604_RS24270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24270;old_locus_tag=LU604_24270 NZ_CP089942.1 Protein Homology CDS 4587535 4589454 . - 0 ID=cds-WP_233479457.1;Parent=gene-LU604_RS24270;Dbxref=Genbank:WP_233479457.1;Name=WP_233479457.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012311.2;locus_tag=LU604_RS24270;product=S8 family serine peptidase;protein_id=WP_233479457.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4589606 4590106 . - . ID=gene-LU604_RS24275;Name=LU604_RS24275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24275;old_locus_tag=LU604_24275 NZ_CP089942.1 GeneMarkS-2+ CDS 4589606 4590106 . - 0 ID=cds-WP_233479458.1;Parent=gene-LU604_RS24275;Dbxref=Genbank:WP_233479458.1;Name=WP_233479458.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS24275;product=hypothetical protein;protein_id=WP_233479458.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4590384 4591082 . - . ID=gene-LU604_RS24280;Name=LU604_RS24280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24280;old_locus_tag=LU604_24280;pseudo=true NZ_CP089942.1 Protein Homology CDS 4590384 4591082 . - 0 ID=cds-LU604_RS24280;Parent=gene-LU604_RS24280;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=LU604_RS24280;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4591175 4592590 . - . ID=gene-LU604_RS24285;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=LU604_RS24285;old_locus_tag=LU604_24285 NZ_CP089942.1 Protein Homology CDS 4591175 4592590 . - 0 ID=cds-WP_020322994.1;Parent=gene-LU604_RS24285;Dbxref=Genbank:WP_020322994.1;Name=WP_020322994.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539604.1;locus_tag=LU604_RS24285;product=replicative DNA helicase;protein_id=WP_020322994.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4592692 4593672 . + . ID=gene-LU604_RS24290;Name=LU604_RS24290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24290;old_locus_tag=LU604_24290 NZ_CP089942.1 Protein Homology CDS 4592692 4593672 . + 0 ID=cds-WP_020322995.1;Parent=gene-LU604_RS24290;Dbxref=Genbank:WP_020322995.1;Name=WP_020322995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007702297.1;locus_tag=LU604_RS24290;product=quinone oxidoreductase;protein_id=WP_020322995.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4593916 4594125 . - . ID=gene-LU604_RS24295;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=LU604_RS24295;old_locus_tag=LU604_24295 NZ_CP089942.1 Protein Homology CDS 4593916 4594125 . - 0 ID=cds-WP_233479459.1;Parent=gene-LU604_RS24295;Dbxref=Genbank:WP_233479459.1;Name=WP_233479459.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322997.1;locus_tag=LU604_RS24295;product=envelope stress response protein PspG;protein_id=WP_233479459.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4594847 4595544 . - . ID=gene-LU604_RS24300;Name=LU604_RS24300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24300;old_locus_tag=LU604_24300;pseudo=true NZ_CP089942.1 Protein Homology CDS 4594847 4595544 . - 0 ID=cds-LU604_RS24300;Parent=gene-LU604_RS24300;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=LU604_RS24300;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4596204 4597253 . - . ID=gene-LU604_RS24305;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=LU604_RS24305;old_locus_tag=LU604_24305 NZ_CP089942.1 Protein Homology CDS 4596204 4597253 . - 0 ID=cds-WP_233479460.1;Parent=gene-LU604_RS24305;Dbxref=Genbank:WP_233479460.1;Name=WP_233479460.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160445.1;locus_tag=LU604_RS24305;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_233479460.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4597345 4597740 . + . ID=gene-LU604_RS24310;Name=LU604_RS24310;end_range=4597740,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24310;old_locus_tag=LU604_24310;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4597345 4597740 . + 0 ID=cds-LU604_RS24310;Parent=gene-LU604_RS24310;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4597740,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004160451.1;locus_tag=LU604_RS24310;partial=true;product=integrase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4597726 4598262 . - . ID=gene-LU604_RS24315;Name=LU604_RS24315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24315;old_locus_tag=LU604_24315;partial=true;pseudo=true;start_range=.,4597726 NZ_CP089942.1 Protein Homology CDS 4597726 4598262 . - 0 ID=cds-LU604_RS24315;Parent=gene-LU604_RS24315;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411479.1;locus_tag=LU604_RS24315;partial=true;product=phage tail protein;pseudo=true;start_range=.,4597726;transl_table=11 NZ_CP089942.1 RefSeq gene 4598436 4599476 . + . ID=gene-LU604_RS24320;Name=LU604_RS24320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24320;old_locus_tag=LU604_24320 NZ_CP089942.1 Protein Homology CDS 4598436 4599476 . + 0 ID=cds-WP_233478989.1-4;Parent=gene-LU604_RS24320;Dbxref=Genbank:WP_233478989.1;Name=WP_233478989.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS24320;product=IS481 family transposase;protein_id=WP_233478989.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4599665 4599862 . - . ID=gene-LU604_RS24325;Name=LU604_RS24325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24325;old_locus_tag=LU604_24325 NZ_CP089942.1 GeneMarkS-2+ CDS 4599665 4599862 . - 0 ID=cds-WP_016191137.1;Parent=gene-LU604_RS24325;Dbxref=Genbank:WP_016191137.1;Name=WP_016191137.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS24325;product=hypothetical protein;protein_id=WP_016191137.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4599938 4600591 . - . ID=gene-LU604_RS24330;Name=LU604_RS24330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24330;old_locus_tag=LU604_24330 NZ_CP089942.1 Protein Homology CDS 4599938 4600591 . - 0 ID=cds-WP_233479461.1;Parent=gene-LU604_RS24330;Dbxref=Genbank:WP_233479461.1;Name=WP_233479461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191138.1;locus_tag=LU604_RS24330;product=DUF2612 domain-containing protein;protein_id=WP_233479461.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4600588 4601778 . - . ID=gene-LU604_RS24335;Name=LU604_RS24335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24335;old_locus_tag=LU604_24335 NZ_CP089942.1 Protein Homology CDS 4600588 4601778 . - 0 ID=cds-WP_233479462.1;Parent=gene-LU604_RS24335;Dbxref=Genbank:WP_233479462.1;Name=WP_233479462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120658.1;locus_tag=LU604_RS24335;product=baseplate J/gp47 family protein;protein_id=WP_233479462.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4601781 4602128 . - . ID=gene-LU604_RS24340;Name=LU604_RS24340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24340;old_locus_tag=LU604_24340 NZ_CP089942.1 Protein Homology CDS 4601781 4602128 . - 0 ID=cds-WP_233479463.1;Parent=gene-LU604_RS24340;Dbxref=Genbank:WP_233479463.1;Name=WP_233479463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001270640.1;locus_tag=LU604_RS24340;product=hypothetical protein;protein_id=WP_233479463.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4602125 4602880 . - . ID=gene-LU604_RS24345;Name=LU604_RS24345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24345;old_locus_tag=LU604_24345 NZ_CP089942.1 Protein Homology CDS 4602125 4602880 . - 0 ID=cds-WP_233479464.1;Parent=gene-LU604_RS24345;Dbxref=Genbank:WP_233479464.1;Name=WP_233479464.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192275.1;locus_tag=LU604_RS24345;product=phage baseplate assembly protein V;protein_id=WP_233479464.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4602880 4603860 . - . ID=gene-LU604_RS24350;Name=LU604_RS24350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24350;old_locus_tag=LU604_24350 NZ_CP089942.1 Protein Homology CDS 4602880 4603860 . - 0 ID=cds-WP_233479465.1;Parent=gene-LU604_RS24350;Dbxref=Genbank:WP_233479465.1;Name=WP_233479465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118365.1;locus_tag=LU604_RS24350;product=hypothetical protein;protein_id=WP_233479465.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4603896 4604195 . - . ID=gene-LU604_RS24355;Name=LU604_RS24355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24355;old_locus_tag=LU604_24355 NZ_CP089942.1 Protein Homology CDS 4603896 4604195 . - 0 ID=cds-WP_233479466.1;Parent=gene-LU604_RS24355;Dbxref=Genbank:WP_233479466.1;Name=WP_233479466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192277.1;locus_tag=LU604_RS24355;product=hypothetical protein;protein_id=WP_233479466.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4604185 4604574 . - . ID=gene-LU604_RS24360;Name=LU604_RS24360;end_range=4604574,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24360;old_locus_tag=LU604_24360;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4604185 4604574 . - 0 ID=cds-LU604_RS24360;Parent=gene-LU604_RS24360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4604574,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118367.1;locus_tag=LU604_RS24360;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4604618 4604791 . - . ID=gene-LU604_RS24365;Name=LU604_RS24365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24365;old_locus_tag=LU604_24365 NZ_CP089942.1 GeneMarkS-2+ CDS 4604618 4604791 . - 0 ID=cds-WP_157275260.1;Parent=gene-LU604_RS24365;Dbxref=Genbank:WP_157275260.1;Name=WP_157275260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS24365;product=hypothetical protein;protein_id=WP_157275260.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4605242 4605901 . + . ID=gene-LU604_RS24370;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=LU604_RS24370;old_locus_tag=LU604_24370 NZ_CP089942.1 Protein Homology CDS 4605242 4605901 . + 0 ID=cds-WP_016192279.1;Parent=gene-LU604_RS24370;Dbxref=Genbank:WP_016192279.1;Name=WP_016192279.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200067.1;locus_tag=LU604_RS24370;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_016192279.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4605980 4607020 . + . ID=gene-LU604_RS24375;Name=LU604_RS24375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24375;old_locus_tag=LU604_24375;pseudo=true NZ_CP089942.1 Protein Homology CDS 4605980 4607020 . + 0 ID=cds-LU604_RS24375;Parent=gene-LU604_RS24375;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS24375;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4607374 4607838 . + . ID=gene-LU604_RS24380;Name=LU604_RS24380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24380;old_locus_tag=LU604_24380 NZ_CP089942.1 Protein Homology CDS 4607374 4607838 . + 0 ID=cds-WP_233479467.1;Parent=gene-LU604_RS24380;Dbxref=Genbank:WP_233479467.1;Name=WP_233479467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=LU604_RS24380;product=hypothetical protein;protein_id=WP_233479467.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4607832 4608155 . + . ID=gene-LU604_RS24385;Name=LU604_RS24385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24385;old_locus_tag=LU604_24385 NZ_CP089942.1 Protein Homology CDS 4607832 4608155 . + 0 ID=cds-WP_233479468.1;Parent=gene-LU604_RS24385;Dbxref=Genbank:WP_233479468.1;Name=WP_233479468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816445.1;locus_tag=LU604_RS24385;product=DUF1493 family protein;protein_id=WP_233479468.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4608263 4608397 . - . ID=gene-LU604_RS27130;Name=LU604_RS27130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27130 NZ_CP089942.1 GeneMarkS-2+ CDS 4608263 4608397 . - 0 ID=cds-WP_256371734.1;Parent=gene-LU604_RS27130;Dbxref=Genbank:WP_256371734.1;Name=WP_256371734.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS27130;product=hypothetical protein;protein_id=WP_256371734.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4608401 4609521 . - . ID=gene-LU604_RS24390;Name=LU604_RS24390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24390;old_locus_tag=LU604_24390 NZ_CP089942.1 Protein Homology CDS 4609263 4609521 . - 0 ID=cds-WP_233479469.1;Parent=gene-LU604_RS24390;Dbxref=Genbank:WP_233479469.1;Name=WP_233479469.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS24390;product=IS3 family transposase;protein_id=WP_233479469.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 4608401 4609263 . - 2 ID=cds-WP_233479469.1;Parent=gene-LU604_RS24390;Dbxref=Genbank:WP_233479469.1;Name=WP_233479469.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS24390;product=IS3 family transposase;protein_id=WP_233479469.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4609593 4610028 . - . ID=gene-LU604_RS24395;Name=LU604_RS24395;end_range=4610028,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24395;old_locus_tag=LU604_24395;partial=true;pseudo=true;start_range=.,4609593 NZ_CP089942.1 Protein Homology CDS 4609593 4610028 . - 0 ID=cds-LU604_RS24395;Parent=gene-LU604_RS24395;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4610028,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=LU604_RS24395;partial=true;product=transposase;pseudo=true;start_range=.,4609593;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4610093 4610798 . + . ID=gene-LU604_RS24400;Name=LU604_RS24400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24400;old_locus_tag=LU604_24400;pseudo=true NZ_CP089942.1 Protein Homology CDS 4610093 4610798 . + 0 ID=cds-LU604_RS24400;Parent=gene-LU604_RS24400;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU604_RS24400;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4610857 4611190 . - . ID=gene-LU604_RS24405;Name=LU604_RS24405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24405;old_locus_tag=LU604_24405;partial=true;pseudo=true;start_range=.,4610857 NZ_CP089942.1 Protein Homology CDS 4610857 4611190 . - 0 ID=cds-LU604_RS24405;Parent=gene-LU604_RS24405;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011150324.1;locus_tag=LU604_RS24405;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,4610857;transl_table=11 NZ_CP089942.1 RefSeq gene 4611303 4614086 . - . ID=gene-LU604_RS24410;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=LU604_RS24410;old_locus_tag=LU604_24410 NZ_CP089942.1 Protein Homology CDS 4611303 4614086 . - 0 ID=cds-WP_233479470.1;Parent=gene-LU604_RS24410;Dbxref=Genbank:WP_233479470.1;Name=WP_233479470.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121852.1;locus_tag=LU604_RS24410;product=DNA polymerase I;protein_id=WP_233479470.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4614487 4615116 . - . ID=gene-LU604_RS24415;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=LU604_RS24415;old_locus_tag=LU604_24415 NZ_CP089942.1 Protein Homology CDS 4614487 4615116 . - 0 ID=cds-WP_016192283.1;Parent=gene-LU604_RS24415;Dbxref=Genbank:WP_016192283.1;Name=WP_016192283.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008109808.1;locus_tag=LU604_RS24415;product=thiol:disulfide interchange protein DsbA;protein_id=WP_016192283.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4615165 4616157 . - . ID=gene-LU604_RS24420;Name=LU604_RS24420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24420;old_locus_tag=LU604_24420 NZ_CP089942.1 Protein Homology CDS 4615165 4616157 . - 0 ID=cds-WP_233479471.1;Parent=gene-LU604_RS24420;Dbxref=Genbank:WP_233479471.1;Name=WP_233479471.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192284.1;locus_tag=LU604_RS24420;product=serine/threonine protein kinase;protein_id=WP_233479471.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4616235 4616504 . - . ID=gene-LU604_RS24425;Name=LU604_RS24425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24425;old_locus_tag=LU604_24425 NZ_CP089942.1 Protein Homology CDS 4616235 4616504 . - 0 ID=cds-WP_233479472.1;Parent=gene-LU604_RS24425;Dbxref=Genbank:WP_233479472.1;Name=WP_233479472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191202.1;locus_tag=LU604_RS24425;product=YihD family protein;protein_id=WP_233479472.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4616651 4617163 . + . ID=gene-LU604_RS24430;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=LU604_RS24430;old_locus_tag=LU604_24430 NZ_CP089942.1 Protein Homology CDS 4616651 4617163 . + 0 ID=cds-WP_233479473.1;Parent=gene-LU604_RS24430;Dbxref=Genbank:WP_233479473.1;Name=WP_233479473.1;Ontology_term=GO:0006777,GO:0005525,GO:0070568;gbkey=CDS;gene=mobA;go_function=GTP binding|0005525||IEA,guanylyltransferase activity|0070568||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014332983.1;locus_tag=LU604_RS24430;product=molybdenum cofactor guanylyltransferase;protein_id=WP_233479473.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4617422 4617537 . - . ID=gene-LU604_RS24435;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LU604_RS24435;old_locus_tag=LU604_24435 NZ_CP089942.1 cmsearch rRNA 4617422 4617537 . - . ID=rna-LU604_RS24435;Parent=gene-LU604_RS24435;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS24435;product=5S ribosomal RNA NZ_CP089942.1 cmsearch exon 4617422 4617537 . - . ID=exon-LU604_RS24435-1;Parent=rna-LU604_RS24435;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS24435;product=5S ribosomal RNA NZ_CP089942.1 RefSeq gene 4617567 4617642 . - . ID=gene-LU604_RS24440;Name=LU604_RS24440;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS24440;old_locus_tag=LU604_24440 NZ_CP089942.1 tRNAscan-SE tRNA 4617567 4617642 . - . ID=rna-LU604_RS24440;Parent=gene-LU604_RS24440;anticodon=(pos:complement(4617607..4617609));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS24440;product=tRNA-Thr NZ_CP089942.1 tRNAscan-SE exon 4617567 4617642 . - . ID=exon-LU604_RS24440-1;Parent=rna-LU604_RS24440;anticodon=(pos:complement(4617607..4617609));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS24440;product=tRNA-Thr NZ_CP089942.1 RefSeq gene 4617698 4617813 . - . ID=gene-LU604_RS24445;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LU604_RS24445;old_locus_tag=LU604_24445 NZ_CP089942.1 cmsearch rRNA 4617698 4617813 . - . ID=rna-LU604_RS24445;Parent=gene-LU604_RS24445;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS24445;product=5S ribosomal RNA NZ_CP089942.1 cmsearch exon 4617698 4617813 . - . ID=exon-LU604_RS24445-1;Parent=rna-LU604_RS24445;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS24445;product=5S ribosomal RNA NZ_CP089942.1 RefSeq gene 4618020 4620922 . - . ID=gene-LU604_RS24450;Name=LU604_RS24450;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU604_RS24450;old_locus_tag=LU604_24450 NZ_CP089942.1 cmsearch rRNA 4618020 4620922 . - . ID=rna-LU604_RS24450;Parent=gene-LU604_RS24450;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS24450;product=23S ribosomal RNA NZ_CP089942.1 cmsearch exon 4618020 4620922 . - . ID=exon-LU604_RS24450-1;Parent=rna-LU604_RS24450;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS24450;product=23S ribosomal RNA NZ_CP089942.1 RefSeq gene 4621122 4621197 . - . ID=gene-LU604_RS24455;Name=LU604_RS24455;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS24455;old_locus_tag=LU604_24455 NZ_CP089942.1 tRNAscan-SE tRNA 4621122 4621197 . - . ID=rna-LU604_RS24455;Parent=gene-LU604_RS24455;anticodon=(pos:complement(4621162..4621164));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS24455;product=tRNA-Ala NZ_CP089942.1 tRNAscan-SE exon 4621122 4621197 . - . ID=exon-LU604_RS24455-1;Parent=rna-LU604_RS24455;anticodon=(pos:complement(4621162..4621164));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS24455;product=tRNA-Ala NZ_CP089942.1 RefSeq gene 4621340 4621416 . - . ID=gene-LU604_RS24460;Name=LU604_RS24460;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS24460;old_locus_tag=LU604_24460 NZ_CP089942.1 tRNAscan-SE tRNA 4621340 4621416 . - . ID=rna-LU604_RS24460;Parent=gene-LU604_RS24460;anticodon=(pos:complement(4621380..4621382));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS24460;product=tRNA-Ile NZ_CP089942.1 tRNAscan-SE exon 4621340 4621416 . - . ID=exon-LU604_RS24460-1;Parent=rna-LU604_RS24460;anticodon=(pos:complement(4621380..4621382));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS24460;product=tRNA-Ile NZ_CP089942.1 RefSeq gene 4621489 4623030 . - . ID=gene-LU604_RS24465;Name=LU604_RS24465;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU604_RS24465;old_locus_tag=LU604_24465 NZ_CP089942.1 cmsearch rRNA 4621489 4623030 . - . ID=rna-LU604_RS24465;Parent=gene-LU604_RS24465;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS24465;product=16S ribosomal RNA NZ_CP089942.1 cmsearch exon 4621489 4623030 . - . ID=exon-LU604_RS24465-1;Parent=rna-LU604_RS24465;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS24465;product=16S ribosomal RNA NZ_CP089942.1 RefSeq gene 4623431 4623967 . - . ID=gene-LU604_RS24470;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=LU604_RS24470;old_locus_tag=LU604_24470 NZ_CP089942.1 Protein Homology CDS 4623431 4623967 . - 0 ID=cds-WP_016192287.1;Parent=gene-LU604_RS24470;Dbxref=Genbank:WP_016192287.1;Name=WP_016192287.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167946.1;locus_tag=LU604_RS24470;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_016192287.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4623987 4625438 . - . ID=gene-LU604_RS24475;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=LU604_RS24475;old_locus_tag=LU604_24475 NZ_CP089942.1 Protein Homology CDS 4623987 4625438 . - 0 ID=cds-WP_233479474.1;Parent=gene-LU604_RS24475;Dbxref=Genbank:WP_233479474.1;Name=WP_233479474.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=LU604_RS24475;product=Trk system potassium transporter TrkH;protein_id=WP_233479474.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4625469 4626080 . - . ID=gene-LU604_RS24480;Name=LU604_RS24480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24480;old_locus_tag=LU604_24480 NZ_CP089942.1 Protein Homology CDS 4625469 4626080 . - 0 ID=cds-WP_016192289.1;Parent=gene-LU604_RS24480;Dbxref=Genbank:WP_016192289.1;Name=WP_016192289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167944.1;locus_tag=LU604_RS24480;product=IMPACT family protein;protein_id=WP_016192289.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4626080 4627411 . - . ID=gene-LU604_RS24485;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=LU604_RS24485;old_locus_tag=LU604_24485 NZ_CP089942.1 Protein Homology CDS 4626080 4627411 . - 0 ID=cds-WP_016192290.1;Parent=gene-LU604_RS24485;Dbxref=Genbank:WP_016192290.1;Name=WP_016192290.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666615.1;locus_tag=LU604_RS24485;product=Xaa-Pro dipeptidase;protein_id=WP_016192290.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4627589 4628575 . + . ID=gene-LU604_RS24490;Name=LU604_RS24490;end_range=4628575,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24490;old_locus_tag=LU604_24490;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4627589 4628575 . + 0 ID=cds-LU604_RS24490;Parent=gene-LU604_RS24490;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003824;end_range=4628575,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001490315.1;locus_tag=LU604_RS24490;partial=true;product=enoyl-CoA hydratase-related protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4628578 4628905 . + . ID=gene-LU604_RS24495;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=pseudogene;locus_tag=LU604_RS24495;old_locus_tag=LU604_24495;partial=true;pseudo=true;start_range=.,4628578 NZ_CP089942.1 Protein Homology CDS 4628578 4628905 . + 0 ID=cds-LU604_RS24495;Parent=gene-LU604_RS24495;Note=FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=fadA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011091846.1;locus_tag=LU604_RS24495;partial=true;product=acetyl-CoA C-acyltransferase;pseudo=true;start_range=.,4628578;transl_table=11 NZ_CP089942.1 RefSeq gene 4628992 4629693 . - . ID=gene-LU604_RS24500;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=LU604_RS24500;old_locus_tag=LU604_24500 NZ_CP089942.1 Protein Homology CDS 4628992 4629693 . - 0 ID=cds-WP_016192294.1;Parent=gene-LU604_RS24500;Dbxref=Genbank:WP_016192294.1;Name=WP_016192294.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167939.1;locus_tag=LU604_RS24500;product=NAD(P)H-flavin reductase;protein_id=WP_016192294.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4629719 4631221 . - . ID=gene-LU604_RS24505;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=LU604_RS24505;old_locus_tag=LU604_24505 NZ_CP089942.1 Protein Homology CDS 4629719 4631221 . - 0 ID=cds-WP_233479475.1;Parent=gene-LU604_RS24505;Dbxref=Genbank:WP_233479475.1;Name=WP_233479475.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192295.1;locus_tag=LU604_RS24505;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_233479475.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4631499 4631987 . + . ID=gene-LU604_RS24510;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=LU604_RS24510;old_locus_tag=LU604_24510 NZ_CP089942.1 Protein Homology CDS 4631499 4631987 . + 0 ID=cds-WP_233480874.1;Parent=gene-LU604_RS24510;Dbxref=Genbank:WP_233480874.1;Name=WP_233480874.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359717.1;locus_tag=LU604_RS24510;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_233480874.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4632009 4632803 . - . ID=gene-LU604_RS24515;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=LU604_RS24515;old_locus_tag=LU604_24515 NZ_CP089942.1 Protein Homology CDS 4632009 4632803 . - 0 ID=cds-WP_233479476.1;Parent=gene-LU604_RS24515;Dbxref=Genbank:WP_233479476.1;Name=WP_233479476.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192297.1;locus_tag=LU604_RS24515;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_233479476.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4632878 4633636 . - . ID=gene-LU604_RS24520;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=LU604_RS24520;old_locus_tag=LU604_24520 NZ_CP089942.1 Protein Homology CDS 4632878 4633636 . - 0 ID=cds-WP_016192298.1;Parent=gene-LU604_RS24520;Dbxref=Genbank:WP_016192298.1;Name=WP_016192298.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440006.1;locus_tag=LU604_RS24520;product=Sec-independent protein translocase subunit TatC;protein_id=WP_016192298.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4633639 4634286 . - . ID=gene-LU604_RS24525;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=LU604_RS24525;old_locus_tag=LU604_24525 NZ_CP089942.1 Protein Homology CDS 4633639 4634286 . - 0 ID=cds-WP_040465771.1;Parent=gene-LU604_RS24525;Dbxref=Genbank:WP_040465771.1;Name=WP_040465771.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072249.1;locus_tag=LU604_RS24525;product=Sec-independent protein translocase protein TatB;protein_id=WP_040465771.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4634290 4634538 . - . ID=gene-LU604_RS24530;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=LU604_RS24530;old_locus_tag=LU604_24530 NZ_CP089942.1 Protein Homology CDS 4634290 4634538 . - 0 ID=cds-WP_046372097.1;Parent=gene-LU604_RS24530;Dbxref=Genbank:WP_046372097.1;Name=WP_046372097.1;Ontology_term=GO:0015628;gbkey=CDS;gene=tatA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666606.1;locus_tag=LU604_RS24530;product=twin-arginine translocase TatA/TatE family subunit;protein_id=WP_046372097.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4634654 4636291 . - . ID=gene-LU604_RS24535;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=LU604_RS24535;old_locus_tag=LU604_24535 NZ_CP089942.1 Protein Homology CDS 4634654 4636291 . - 0 ID=cds-WP_016192301.1;Parent=gene-LU604_RS24535;Dbxref=Genbank:WP_016192301.1;Name=WP_016192301.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010257248.1;locus_tag=LU604_RS24535;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_016192301.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4636288 4636893 . - . ID=gene-LU604_RS24540;Name=LU604_RS24540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24540;old_locus_tag=LU604_24540 NZ_CP089942.1 Protein Homology CDS 4636288 4636893 . - 0 ID=cds-WP_016192302.1;Parent=gene-LU604_RS24540;Dbxref=Genbank:WP_016192302.1;Name=WP_016192302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001116086.1;locus_tag=LU604_RS24540;product=SCP2 domain-containing protein;protein_id=WP_016192302.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4636906 4637661 . - . ID=gene-LU604_RS24545;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=LU604_RS24545;old_locus_tag=LU604_24545 NZ_CP089942.1 Protein Homology CDS 4636906 4637661 . - 0 ID=cds-WP_016192303.1;Parent=gene-LU604_RS24545;Dbxref=Genbank:WP_016192303.1;Name=WP_016192303.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007704556.1;locus_tag=LU604_RS24545;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_016192303.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4637740 4639242 . - . ID=gene-LU604_RS24550;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=LU604_RS24550;old_locus_tag=LU604_24550 NZ_CP089942.1 Protein Homology CDS 4637740 4639242 . - 0 ID=cds-WP_233479477.1;Parent=gene-LU604_RS24550;Dbxref=Genbank:WP_233479477.1;Name=WP_233479477.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192304.1;locus_tag=LU604_RS24550;product=DNA recombination protein RmuC;protein_id=WP_233479477.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4639912 4640608 . - . ID=gene-LU604_RS24555;Name=LU604_RS24555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24555;old_locus_tag=LU604_24555 NZ_CP089942.1 Protein Homology CDS 4640355 4640608 . - 0 ID=cds-WP_233479478.1;Parent=gene-LU604_RS24555;Dbxref=Genbank:WP_233479478.1;Name=WP_233479478.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS24555;product=IS1 family transposase;protein_id=WP_233479478.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 4639912 4640356 . - 1 ID=cds-WP_233479478.1;Parent=gene-LU604_RS24555;Dbxref=Genbank:WP_233479478.1;Name=WP_233479478.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS24555;product=IS1 family transposase;protein_id=WP_233479478.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4640873 4641634 . - . ID=gene-LU604_RS24560;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=LU604_RS24560;old_locus_tag=LU604_24560 NZ_CP089942.1 Protein Homology CDS 4640873 4641634 . - 0 ID=cds-WP_233479479.1;Parent=gene-LU604_RS24560;Dbxref=Genbank:WP_233479479.1;Name=WP_233479479.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224472.1;locus_tag=LU604_RS24560;product=uridine phosphorylase;protein_id=WP_233479479.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4641923 4642753 . + . ID=gene-LU604_RS24565;Name=LU604_RS24565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24565;old_locus_tag=LU604_24565 NZ_CP089942.1 Protein Homology CDS 4641923 4642753 . + 0 ID=cds-WP_233479480.1;Parent=gene-LU604_RS24565;Dbxref=Genbank:WP_233479480.1;Name=WP_233479480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192306.1;locus_tag=LU604_RS24565;product=dienelactone hydrolase family protein;protein_id=WP_233479480.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4642938 4645208 . - . ID=gene-LU604_RS24570;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=LU604_RS24570;old_locus_tag=LU604_24570 NZ_CP089942.1 Protein Homology CDS 4642938 4645208 . - 0 ID=cds-WP_233479481.1;Parent=gene-LU604_RS24570;Dbxref=Genbank:WP_233479481.1;Name=WP_233479481.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192307.1;locus_tag=LU604_RS24570;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_233479481.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4645344 4646267 . + . ID=gene-LU604_RS24575;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=LU604_RS24575;old_locus_tag=LU604_24575 NZ_CP089942.1 Protein Homology CDS 4645344 4646267 . + 0 ID=cds-WP_233479482.1;Parent=gene-LU604_RS24575;Dbxref=Genbank:WP_233479482.1;Name=WP_233479482.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192308.1;locus_tag=LU604_RS24575;product=HTH-type transcriptional regulator MetR;protein_id=WP_233479482.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4646365 4646850 . + . ID=gene-LU604_RS24580;Name=LU604_RS24580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24580;old_locus_tag=LU604_24580 NZ_CP089942.1 Protein Homology CDS 4646365 4646850 . + 0 ID=cds-WP_016192309.1;Parent=gene-LU604_RS24580;Dbxref=Genbank:WP_016192309.1;Name=WP_016192309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200265.1;locus_tag=LU604_RS24580;product=DUF1456 family protein;protein_id=WP_016192309.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4647004 4647252 . - . ID=gene-LU604_RS24585;Name=LU604_RS24585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24585;old_locus_tag=LU604_24585 NZ_CP089942.1 GeneMarkS-2+ CDS 4647004 4647252 . - 0 ID=cds-WP_233479483.1;Parent=gene-LU604_RS24585;Dbxref=Genbank:WP_233479483.1;Name=WP_233479483.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS24585;product=hypothetical protein;protein_id=WP_233479483.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4647643 4648512 . - . ID=gene-LU604_RS24590;Name=LU604_RS24590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24590;old_locus_tag=LU604_24590;pseudo=true NZ_CP089942.1 Protein Homology CDS 4647643 4648512 . - 0 ID=cds-LU604_RS24590;Parent=gene-LU604_RS24590;Note=internal stop;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388404.1;locus_tag=LU604_RS24590;product=carboxylate/amino acid/amine transporter;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4648631 4649134 . - . ID=gene-LU604_RS24595;Name=LU604_RS24595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24595;old_locus_tag=LU604_24595 NZ_CP089942.1 Protein Homology CDS 4648631 4649134 . - 0 ID=cds-WP_233478802.1-2;Parent=gene-LU604_RS24595;Dbxref=Genbank:WP_233478802.1;Name=WP_233478802.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU604_RS24595;product=IS1 family transposase;protein_id=WP_233478802.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4649053 4649328 . - . ID=gene-LU604_RS24600;Name=LU604_RS24600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24600;old_locus_tag=LU604_24600 NZ_CP089942.1 Protein Homology CDS 4649053 4649328 . - 0 ID=cds-WP_016192850.1-5;Parent=gene-LU604_RS24600;Dbxref=Genbank:WP_016192850.1;Name=WP_016192850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU604_RS24600;product=transposase;protein_id=WP_016192850.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4649633 4650979 . + . ID=gene-LU604_RS24605;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=LU604_RS24605;old_locus_tag=LU604_24605 NZ_CP089942.1 Protein Homology CDS 4649633 4650979 . + 0 ID=cds-WP_233479484.1;Parent=gene-LU604_RS24605;Dbxref=Genbank:WP_233479484.1;Name=WP_233479484.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192312.1;locus_tag=LU604_RS24605;product=glycerol-3-phosphate transporter;protein_id=WP_233479484.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4651002 4652021 . + . ID=gene-LU604_RS24610;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=LU604_RS24610;old_locus_tag=LU604_24610 NZ_CP089942.1 Protein Homology CDS 4651002 4652021 . + 0 ID=cds-WP_233480875.1;Parent=gene-LU604_RS24610;Dbxref=Genbank:WP_233480875.1;Name=WP_233480875.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192313.1;locus_tag=LU604_RS24610;product=glycerophosphodiester phosphodiesterase;protein_id=WP_233480875.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4652062 4652862 . - . ID=gene-LU604_RS24615;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=LU604_RS24615;old_locus_tag=LU604_24615 NZ_CP089942.1 Protein Homology CDS 4652062 4652862 . - 0 ID=cds-WP_016192314.1;Parent=gene-LU604_RS24615;Dbxref=Genbank:WP_016192314.1;Name=WP_016192314.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167918.1;locus_tag=LU604_RS24615;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_016192314.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4652935 4653927 . - . ID=gene-LU604_RS24620;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=LU604_RS24620;old_locus_tag=LU604_24620 NZ_CP089942.1 Protein Homology CDS 4652935 4653927 . - 0 ID=cds-WP_233479485.1;Parent=gene-LU604_RS24620;Dbxref=Genbank:WP_233479485.1;Name=WP_233479485.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192315.1;locus_tag=LU604_RS24620;product=lysophospholipase L2;protein_id=WP_233479485.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4654043 4654666 . + . ID=gene-LU604_RS24625;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=LU604_RS24625;old_locus_tag=LU604_24625 NZ_CP089942.1 Protein Homology CDS 4654043 4654666 . + 0 ID=cds-WP_233479486.1;Parent=gene-LU604_RS24625;Dbxref=Genbank:WP_233479486.1;Name=WP_233479486.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154942.1;locus_tag=LU604_RS24625;product=homoserine/homoserine lactone efflux protein;protein_id=WP_233479486.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4654729 4655345 . - . ID=gene-LU604_RS24630;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=pseudogene;locus_tag=LU604_RS24630;old_locus_tag=LU604_24630;pseudo=true NZ_CP089942.1 Protein Homology CDS 4654729 4655345 . - 0 ID=cds-LU604_RS24630;Parent=gene-LU604_RS24630;Note=frameshifted%3B internal stop;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456025.1;locus_tag=LU604_RS24630;product=threonine export protein RhtC;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4655367 4657190 . - . ID=gene-LU604_RS24635;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=LU604_RS24635;old_locus_tag=LU604_24635 NZ_CP089942.1 Protein Homology CDS 4655367 4657190 . - 0 ID=cds-WP_016192319.1;Parent=gene-LU604_RS24635;Dbxref=Genbank:WP_016192319.1;Name=WP_016192319.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854379.1;locus_tag=LU604_RS24635;product=ATP-dependent DNA helicase RecQ;protein_id=WP_016192319.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4657245 4658123 . - . ID=gene-LU604_RS24640;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=LU604_RS24640;old_locus_tag=LU604_24640 NZ_CP089942.1 Protein Homology CDS 4657245 4658123 . - 0 ID=cds-WP_233479487.1;Parent=gene-LU604_RS24640;Dbxref=Genbank:WP_233479487.1;Name=WP_233479487.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004154940.1;locus_tag=LU604_RS24640;product=phospholipase A;protein_id=WP_233479487.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4658294 4658771 . + . ID=gene-LU604_RS24645;Name=LU604_RS24645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24645;old_locus_tag=LU604_24645;pseudo=true NZ_CP089942.1 Protein Homology CDS 4658294 4658771 . + 0 ID=cds-LU604_RS24645;Parent=gene-LU604_RS24645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019845840.1;locus_tag=LU604_RS24645;product=thioesterase family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4658801 4659703 . + . ID=gene-LU604_RS24650;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=LU604_RS24650;old_locus_tag=LU604_24650 NZ_CP089942.1 Protein Homology CDS 4658801 4659703 . + 0 ID=cds-WP_233479488.1;Parent=gene-LU604_RS24650;Dbxref=Genbank:WP_233479488.1;Name=WP_233479488.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192322.1;locus_tag=LU604_RS24650;product=EamA family transporter RarD;protein_id=WP_233479488.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4659698 4660651 . - . ID=gene-LU604_RS24655;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=LU604_RS24655;old_locus_tag=LU604_24655 NZ_CP089942.1 Protein Homology CDS 4659698 4660651 . - 0 ID=cds-WP_016192323.1;Parent=gene-LU604_RS24655;Dbxref=Genbank:WP_016192323.1;Name=WP_016192323.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095;gbkey=CDS;gene=corA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=LU604_RS24655;product=magnesium/cobalt transporter CorA;protein_id=WP_016192323.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4660926 4661399 . + . ID=gene-LU604_RS24660;Name=LU604_RS24660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24660;old_locus_tag=LU604_24660 NZ_CP089942.1 Protein Homology CDS 4660926 4661399 . + 0 ID=cds-WP_016192324.1;Parent=gene-LU604_RS24660;Dbxref=Genbank:WP_016192324.1;Name=WP_016192324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318314.1;locus_tag=LU604_RS24660;product=WbuC family cupin fold metalloprotein;protein_id=WP_016192324.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4661687 4663849 . - . ID=gene-LU604_RS24665;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=LU604_RS24665;old_locus_tag=LU604_24665 NZ_CP089942.1 Protein Homology CDS 4661687 4663849 . - 0 ID=cds-WP_233479489.1;Parent=gene-LU604_RS24665;Dbxref=Genbank:WP_233479489.1;Name=WP_233479489.1;Ontology_term=GO:0006268,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455510.1;locus_tag=LU604_RS24665;product=DNA helicase II;protein_id=WP_233479489.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4663907 4664623 . - . ID=gene-LU604_RS24670;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=LU604_RS24670;old_locus_tag=LU604_24670 NZ_CP089942.1 Protein Homology CDS 4663907 4664623 . - 0 ID=cds-WP_016192326.1;Parent=gene-LU604_RS24670;Dbxref=Genbank:WP_016192326.1;Name=WP_016192326.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543027.1;locus_tag=LU604_RS24670;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_016192326.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4664623 4665531 . - . ID=gene-LU604_RS24675;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=LU604_RS24675;old_locus_tag=LU604_24675 NZ_CP089942.1 Protein Homology CDS 4664623 4665531 . - 0 ID=cds-WP_016192327.1;Parent=gene-LU604_RS24675;Dbxref=Genbank:WP_016192327.1;Name=WP_016192327.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666586.1;locus_tag=LU604_RS24675;product=tyrosine recombinase XerC;protein_id=WP_016192327.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4665528 4666232 . - . ID=gene-LU604_RS24680;Name=LU604_RS24680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24680;old_locus_tag=LU604_24680 NZ_CP089942.1 Protein Homology CDS 4665528 4666232 . - 0 ID=cds-WP_016192328.1;Parent=gene-LU604_RS24680;Dbxref=Genbank:WP_016192328.1;Name=WP_016192328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854361.1;locus_tag=LU604_RS24680;product=DUF484 domain-containing protein;protein_id=WP_016192328.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4666229 4667053 . - . ID=gene-LU604_RS24685;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=LU604_RS24685;old_locus_tag=LU604_24685 NZ_CP089942.1 Protein Homology CDS 4666229 4667053 . - 0 ID=cds-WP_016192329.1;Parent=gene-LU604_RS24685;Dbxref=Genbank:WP_016192329.1;Name=WP_016192329.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=LU604_RS24685;product=diaminopimelate epimerase;protein_id=WP_016192329.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4667019 4667306 . - . ID=gene-LU604_RS24690;Name=LU604_RS24690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24690;old_locus_tag=LU604_24690 NZ_CP089942.1 GeneMarkS-2+ CDS 4667019 4667306 . - 0 ID=cds-WP_233479490.1;Parent=gene-LU604_RS24690;Dbxref=Genbank:WP_233479490.1;Name=WP_233479490.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS24690;product=lipoprotein;protein_id=WP_233479490.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4667471 4670026 . - . ID=gene-LU604_RS24695;Name=LU604_RS24695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24695;old_locus_tag=LU604_24695 NZ_CP089942.1 Protein Homology CDS 4667471 4670026 . - 0 ID=cds-WP_016192331.1;Parent=gene-LU604_RS24695;Dbxref=Genbank:WP_016192331.1;Name=WP_016192331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106245.1;locus_tag=LU604_RS24695;product=class I adenylate cyclase;protein_id=WP_016192331.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4670312 4671253 . + . ID=gene-LU604_RS24700;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=LU604_RS24700;old_locus_tag=LU604_24700 NZ_CP089942.1 Protein Homology CDS 4670312 4671253 . + 0 ID=cds-WP_016192332.1;Parent=gene-LU604_RS24700;Dbxref=Genbank:WP_016192332.1;Name=WP_016192332.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543023.1;locus_tag=LU604_RS24700;product=hydroxymethylbilane synthase;protein_id=WP_016192332.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4671250 4671990 . + . ID=gene-LU604_RS24705;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=LU604_RS24705;old_locus_tag=LU604_24705 NZ_CP089942.1 Protein Homology CDS 4671250 4671990 . + 0 ID=cds-WP_016192333.1;Parent=gene-LU604_RS24705;Dbxref=Genbank:WP_016192333.1;Name=WP_016192333.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359683.1;locus_tag=LU604_RS24705;product=uroporphyrinogen-III synthase;protein_id=WP_016192333.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4672015 4673145 . + . ID=gene-LU604_RS24710;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=LU604_RS24710;old_locus_tag=LU604_24710 NZ_CP089942.1 Protein Homology CDS 4672015 4673145 . + 0 ID=cds-WP_233481428.1;Parent=gene-LU604_RS24710;Dbxref=Genbank:WP_233481428.1;Name=WP_233481428.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012439976.1;locus_tag=LU604_RS24710;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_233481428.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4673148 4674338 . + . ID=gene-LU604_RS24715;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=LU604_RS24715;old_locus_tag=LU604_24715 NZ_CP089942.1 Protein Homology CDS 4673148 4674338 . + 0 ID=cds-WP_233479492.1;Parent=gene-LU604_RS24715;Dbxref=Genbank:WP_233479492.1;Name=WP_233479492.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192335.1;locus_tag=LU604_RS24715;product=protoheme IX biogenesis protein HemY;protein_id=WP_233479492.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4675729 4675805 . - . ID=gene-LU604_RS24720;Name=LU604_RS24720;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS24720;old_locus_tag=LU604_24720 NZ_CP089942.1 tRNAscan-SE tRNA 4675729 4675805 . - . ID=rna-LU604_RS24720;Parent=gene-LU604_RS24720;anticodon=(pos:complement(4675769..4675771));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS24720;product=tRNA-Pro NZ_CP089942.1 tRNAscan-SE exon 4675729 4675805 . - . ID=exon-LU604_RS24720-1;Parent=rna-LU604_RS24720;anticodon=(pos:complement(4675769..4675771));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS24720;product=tRNA-Pro NZ_CP089942.1 RefSeq gene 4675873 4675949 . - . ID=gene-LU604_RS24725;Name=LU604_RS24725;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS24725;old_locus_tag=LU604_24725 NZ_CP089942.1 tRNAscan-SE tRNA 4675873 4675949 . - . ID=rna-LU604_RS24725;Parent=gene-LU604_RS24725;anticodon=(pos:complement(4675913..4675915));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS24725;product=tRNA-Pro NZ_CP089942.1 tRNAscan-SE exon 4675873 4675949 . - . ID=exon-LU604_RS24725-1;Parent=rna-LU604_RS24725;anticodon=(pos:complement(4675913..4675915));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS24725;product=tRNA-Pro NZ_CP089942.1 RefSeq gene 4675980 4676066 . - . ID=gene-LU604_RS24730;Name=LU604_RS24730;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS24730;old_locus_tag=LU604_24730 NZ_CP089942.1 tRNAscan-SE tRNA 4675980 4676066 . - . ID=rna-LU604_RS24730;Parent=gene-LU604_RS24730;anticodon=(pos:complement(4676030..4676032));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS24730;product=tRNA-Leu NZ_CP089942.1 tRNAscan-SE exon 4675980 4676066 . - . ID=exon-LU604_RS24730-1;Parent=rna-LU604_RS24730;anticodon=(pos:complement(4676030..4676032));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS24730;product=tRNA-Leu NZ_CP089942.1 RefSeq gene 4676082 4676157 . - . ID=gene-LU604_RS24735;Name=LU604_RS24735;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS24735;old_locus_tag=LU604_24735 NZ_CP089942.1 tRNAscan-SE tRNA 4676082 4676157 . - . ID=rna-LU604_RS24735;Parent=gene-LU604_RS24735;anticodon=(pos:complement(4676122..4676124));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS24735;product=tRNA-His NZ_CP089942.1 tRNAscan-SE exon 4676082 4676157 . - . ID=exon-LU604_RS24735-1;Parent=rna-LU604_RS24735;anticodon=(pos:complement(4676122..4676124));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS24735;product=tRNA-His NZ_CP089942.1 RefSeq gene 4676222 4676298 . - . ID=gene-LU604_RS24740;Name=LU604_RS24740;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS24740;old_locus_tag=LU604_24740 NZ_CP089942.1 tRNAscan-SE tRNA 4676222 4676298 . - . ID=rna-LU604_RS24740;Parent=gene-LU604_RS24740;anticodon=(pos:complement(4676262..4676264));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS24740;product=tRNA-Arg NZ_CP089942.1 tRNAscan-SE exon 4676222 4676298 . - . ID=exon-LU604_RS24740-1;Parent=rna-LU604_RS24740;anticodon=(pos:complement(4676262..4676264));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS24740;product=tRNA-Arg NZ_CP089942.1 RefSeq gene 4676478 4677218 . - . ID=gene-LU604_RS24745;Name=rffM;gbkey=Gene;gene=rffM;gene_biotype=protein_coding;locus_tag=LU604_RS24745;old_locus_tag=LU604_24745 NZ_CP089942.1 Protein Homology CDS 4676478 4677218 . - 0 ID=cds-WP_016192336.1;Parent=gene-LU604_RS24745;Dbxref=Genbank:WP_016192336.1;Name=WP_016192336.1;Ontology_term=GO:0016740;gbkey=CDS;gene=rffM;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015699135.1;locus_tag=LU604_RS24745;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_016192336.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4677249 4678598 . - . ID=gene-LU604_RS24750;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=LU604_RS24750;old_locus_tag=LU604_24750 NZ_CP089942.1 Protein Homology CDS 4677249 4678598 . - 0 ID=cds-WP_233479493.1;Parent=gene-LU604_RS24750;Dbxref=Genbank:WP_233479493.1;Name=WP_233479493.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192337.1;locus_tag=LU604_RS24750;product=ECA oligosaccharide polymerase;protein_id=WP_233479493.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4678595 4679662 . - . ID=gene-LU604_RS24755;Name=LU604_RS24755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24755;old_locus_tag=LU604_24755 NZ_CP089942.1 Protein Homology CDS 4678595 4679662 . - 0 ID=cds-WP_016192338.1;Parent=gene-LU604_RS24755;Dbxref=Genbank:WP_016192338.1;Name=WP_016192338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906447.1;locus_tag=LU604_RS24755;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_016192338.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4679659 4680909 . - . ID=gene-LU604_RS24760;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=LU604_RS24760;old_locus_tag=LU604_24760 NZ_CP089942.1 Protein Homology CDS 4679659 4680909 . - 0 ID=cds-WP_233479494.1;Parent=gene-LU604_RS24760;Dbxref=Genbank:WP_233479494.1;Name=WP_233479494.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891262.1;locus_tag=LU604_RS24760;product=lipid III flippase WzxE;protein_id=WP_233479494.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4680911 4682041 . - . ID=gene-LU604_RS24765;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=LU604_RS24765;old_locus_tag=LU604_24765 NZ_CP089942.1 Protein Homology CDS 4680911 4682041 . - 0 ID=cds-WP_233479495.1;Parent=gene-LU604_RS24765;Dbxref=Genbank:WP_233479495.1;Name=WP_233479495.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312751.1;locus_tag=LU604_RS24765;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_233479495.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4682046 4682756 . - . ID=gene-LU604_RS24770;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=LU604_RS24770;old_locus_tag=LU604_24770 NZ_CP089942.1 Protein Homology CDS 4682046 4682756 . - 0 ID=cds-WP_016192341.1;Parent=gene-LU604_RS24770;Dbxref=Genbank:WP_016192341.1;Name=WP_016192341.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800645.1;locus_tag=LU604_RS24770;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_016192341.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4682753 4684015 . - . ID=gene-LU604_RS24775;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=LU604_RS24775;old_locus_tag=LU604_24775 NZ_CP089942.1 Protein Homology CDS 4682753 4684015 . - 0 ID=cds-WP_233479496.1;Parent=gene-LU604_RS24775;Dbxref=Genbank:WP_233479496.1;Name=WP_233479496.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172152.1;locus_tag=LU604_RS24775;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_233479496.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4684012 4685142 . - . ID=gene-LU604_RS24780;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=LU604_RS24780;old_locus_tag=LU604_24780 NZ_CP089942.1 Protein Homology CDS 4684012 4685142 . - 0 ID=cds-WP_233479497.1;Parent=gene-LU604_RS24780;Dbxref=Genbank:WP_233479497.1;Name=WP_233479497.1;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026253.1;locus_tag=LU604_RS24780;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=WP_233479497.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4685192 4686220 . - . ID=gene-LU604_RS24785;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=LU604_RS24785;old_locus_tag=LU604_24785 NZ_CP089942.1 Protein Homology CDS 4685192 4686220 . - 0 ID=cds-WP_233479498.1;Parent=gene-LU604_RS24785;Dbxref=Genbank:WP_233479498.1;Name=WP_233479498.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192344.1;locus_tag=LU604_RS24785;product=ECA polysaccharide chain length modulation protein;protein_id=WP_233479498.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4686275 4687354 . - . ID=gene-LU604_RS24790;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=LU604_RS24790;old_locus_tag=LU604_24790 NZ_CP089942.1 Protein Homology CDS 4686275 4687354 . - 0 ID=cds-WP_040465773.1;Parent=gene-LU604_RS24790;Dbxref=Genbank:WP_040465773.1;Name=WP_040465773.1;Ontology_term=GO:0009246,GO:0016780;gbkey=CDS;gene=wecA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375423.1;locus_tag=LU604_RS24790;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_040465773.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4687669 4688928 . - . ID=gene-LU604_RS24795;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=LU604_RS24795;old_locus_tag=LU604_24795 NZ_CP089942.1 Protein Homology CDS 4687669 4688928 . - 0 ID=cds-WP_016192346.1;Parent=gene-LU604_RS24795;Dbxref=Genbank:WP_016192346.1;Name=WP_016192346.1;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=LU604_RS24795;product=transcription termination factor Rho;protein_id=WP_016192346.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4689387 4689719 . - . ID=gene-LU604_RS24800;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LU604_RS24800;old_locus_tag=LU604_24800 NZ_CP089942.1 Protein Homology CDS 4689387 4689719 . - 0 ID=cds-WP_016192347.1;Parent=gene-LU604_RS24800;Dbxref=Genbank:WP_016192347.1;Name=WP_016192347.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851963.1;locus_tag=LU604_RS24800;product=thioredoxin TrxA;protein_id=WP_016192347.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4689837 4691126 . + . ID=gene-LU604_RS24805;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=LU604_RS24805;old_locus_tag=LU604_24805 NZ_CP089942.1 Protein Homology CDS 4689837 4691126 . + 0 ID=cds-WP_016192348.1;Parent=gene-LU604_RS24805;Dbxref=Genbank:WP_016192348.1;Name=WP_016192348.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312740.1;locus_tag=LU604_RS24805;product=ATP-dependent RNA helicase RhlB;protein_id=WP_016192348.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4691133 4692617 . + . ID=gene-LU604_RS24810;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=LU604_RS24810;old_locus_tag=LU604_24810 NZ_CP089942.1 Protein Homology CDS 4691133 4692617 . + 0 ID=cds-WP_016192349.1;Parent=gene-LU604_RS24810;Dbxref=Genbank:WP_016192349.1;Name=WP_016192349.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001329216.1;locus_tag=LU604_RS24810;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_016192349.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4692643 4694364 . - . ID=gene-LU604_RS24815;Name=LU604_RS24815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24815;old_locus_tag=LU604_24815 NZ_CP089942.1 Protein Homology CDS 4692643 4694364 . - 0 ID=cds-WP_046372101.1;Parent=gene-LU604_RS24815;Dbxref=Genbank:WP_046372101.1;Name=WP_046372101.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012754.2;locus_tag=LU604_RS24815;product=type III helper protein HopAK1;protein_id=WP_046372101.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4694614 4696644 . - . ID=gene-LU604_RS24820;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=LU604_RS24820;old_locus_tag=LU604_24820 NZ_CP089942.1 Protein Homology CDS 4694614 4696644 . - 0 ID=cds-WP_016192351.1;Parent=gene-LU604_RS24820;Dbxref=Genbank:WP_016192351.1;Name=WP_016192351.1;Ontology_term=GO:0006268,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017345708.1;locus_tag=LU604_RS24820;product=DNA helicase Rep;protein_id=WP_016192351.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4696778 4697482 . - . ID=gene-LU604_RS24825;Name=LU604_RS24825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24825;old_locus_tag=LU604_24825 NZ_CP089942.1 Protein Homology CDS 4696778 4697482 . - 0 ID=cds-WP_233479499.1;Parent=gene-LU604_RS24825;Dbxref=Genbank:WP_233479499.1;Name=WP_233479499.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU604_RS24825;product=IS6 family transposase;protein_id=WP_233479499.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4697611 4698201 . - . ID=gene-LU604_RS24830;Name=LU604_RS24830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24830;old_locus_tag=LU604_24830 NZ_CP089942.1 Protein Homology CDS 4697611 4698201 . - 0 ID=cds-WP_016192352.1;Parent=gene-LU604_RS24830;Dbxref=Genbank:WP_016192352.1;Name=WP_016192352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858360.1;locus_tag=LU604_RS24830;product=type III effector protein;protein_id=WP_016192352.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4698272 4698493 . - . ID=gene-LU604_RS24835;Name=LU604_RS24835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24835;old_locus_tag=LU604_24835 NZ_CP089942.1 GeneMarkS-2+ CDS 4698272 4698493 . - 0 ID=cds-WP_233481429.1;Parent=gene-LU604_RS24835;Dbxref=Genbank:WP_233481429.1;Name=WP_233481429.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS24835;product=hypothetical protein;protein_id=WP_233481429.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4698706 4699823 . + . ID=gene-LU604_RS24840;Name=LU604_RS24840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24840;old_locus_tag=LU604_24840;pseudo=true NZ_CP089942.1 Protein Homology CDS 4698706 4699823 . + 0 ID=cds-LU604_RS24840;Parent=gene-LU604_RS24840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539782.1;locus_tag=LU604_RS24840;product=RNA-guided endonuclease TnpB family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4700204 4700494 . + . ID=gene-LU604_RS24845;Name=LU604_RS24845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24845;old_locus_tag=LU604_24845 NZ_CP089942.1 Protein Homology CDS 4700204 4700494 . + 0 ID=cds-WP_233480876.1;Parent=gene-LU604_RS24845;Dbxref=Genbank:WP_233480876.1;Name=WP_233480876.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018050.2;locus_tag=LU604_RS24845;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_233480876.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4700487 4700804 . + . ID=gene-LU604_RS24850;Name=LU604_RS24850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24850;old_locus_tag=LU604_24850 NZ_CP089942.1 Protein Homology CDS 4700487 4700804 . + 0 ID=cds-WP_016192357.1;Parent=gene-LU604_RS24850;Dbxref=Genbank:WP_016192357.1;Name=WP_016192357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192357.1;locus_tag=LU604_RS24850;product=helix-turn-helix domain-containing protein;protein_id=WP_016192357.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4700911 4701615 . + . ID=gene-LU604_RS24855;Name=LU604_RS24855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24855;old_locus_tag=LU604_24855 NZ_CP089942.1 Protein Homology CDS 4700911 4701615 . + 0 ID=cds-WP_233479500.1;Parent=gene-LU604_RS24855;Dbxref=Genbank:WP_233479500.1;Name=WP_233479500.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU604_RS24855;product=IS6 family transposase;protein_id=WP_233479500.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4701826 4702122 . + . ID=gene-LU604_RS24860;Name=LU604_RS24860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24860;old_locus_tag=LU604_24860 NZ_CP089942.1 Protein Homology CDS 4701826 4702122 . + 0 ID=cds-WP_016192358.1;Parent=gene-LU604_RS24860;Dbxref=Genbank:WP_016192358.1;Name=WP_016192358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846807.1;locus_tag=LU604_RS24860;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_016192358.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4702124 4702408 . + . ID=gene-LU604_RS24865;Name=LU604_RS24865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24865;old_locus_tag=LU604_24865 NZ_CP089942.1 Protein Homology CDS 4702124 4702408 . + 0 ID=cds-WP_013583077.1;Parent=gene-LU604_RS24865;Dbxref=Genbank:WP_013583077.1;Name=WP_013583077.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846808.1;locus_tag=LU604_RS24865;product=putative addiction module antidote protein;protein_id=WP_013583077.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4702860 4703981 . + . ID=gene-LU604_RS24870;Name=LU604_RS24870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24870;old_locus_tag=LU604_24870 NZ_CP089942.1 Protein Homology CDS 4702860 4703981 . + 0 ID=cds-WP_233481430.1;Parent=gene-LU604_RS24870;Dbxref=Genbank:WP_233481430.1;Name=WP_233481430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539782.1;locus_tag=LU604_RS24870;product=transposase;protein_id=WP_233481430.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4704075 4704494 . + . ID=gene-LU604_RS24875;Name=LU604_RS24875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24875;old_locus_tag=LU604_24875 NZ_CP089942.1 Protein Homology CDS 4704075 4704494 . + 0 ID=cds-WP_016192361.1;Parent=gene-LU604_RS24875;Dbxref=Genbank:WP_016192361.1;Name=WP_016192361.1;Ontology_term=GO:0006260,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF013603.2;locus_tag=LU604_RS24875;product=protein rep;protein_id=WP_016192361.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4704564 4705166 . + . ID=gene-LU604_RS24880;Name=LU604_RS24880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24880;old_locus_tag=LU604_24880 NZ_CP089942.1 Protein Homology CDS 4704564 4705166 . + 0 ID=cds-WP_233479502.1;Parent=gene-LU604_RS24880;Dbxref=Genbank:WP_233479502.1;Name=WP_233479502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192362.1;locus_tag=LU604_RS24880;product=pesticin C-terminus-like muramidase;protein_id=WP_233479502.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4705169 4705582 . + . ID=gene-LU604_RS24885;Name=LU604_RS24885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24885;old_locus_tag=LU604_24885 NZ_CP089942.1 GeneMarkS-2+ CDS 4705169 4705582 . + 0 ID=cds-WP_016192363.1;Parent=gene-LU604_RS24885;Dbxref=Genbank:WP_016192363.1;Name=WP_016192363.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS24885;product=hypothetical protein;protein_id=WP_016192363.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4706116 4706820 . + . ID=gene-LU604_RS24890;Name=LU604_RS24890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24890;old_locus_tag=LU604_24890 NZ_CP089942.1 Protein Homology CDS 4706116 4706820 . + 0 ID=cds-WP_233478933.1-2;Parent=gene-LU604_RS24890;Dbxref=Genbank:WP_233478933.1;Name=WP_233478933.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU604_RS24890;product=IS6 family transposase;protein_id=WP_233478933.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4706921 4707286 . - . ID=gene-LU604_RS24895;Name=LU604_RS24895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24895;old_locus_tag=LU604_24895 NZ_CP089942.1 Protein Homology CDS 4706921 4707286 . - 0 ID=cds-WP_233479503.1;Parent=gene-LU604_RS24895;Dbxref=Genbank:WP_233479503.1;Name=WP_233479503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192365.1;locus_tag=LU604_RS24895;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_233479503.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4707286 4707558 . - . ID=gene-LU604_RS24900;Name=LU604_RS24900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24900;old_locus_tag=LU604_24900 NZ_CP089942.1 Protein Homology CDS 4707286 4707558 . - 0 ID=cds-WP_016192366.1;Parent=gene-LU604_RS24900;Dbxref=Genbank:WP_016192366.1;Name=WP_016192366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013036381.1;locus_tag=LU604_RS24900;product=hypothetical protein;protein_id=WP_016192366.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4707755 4708312 . - . ID=gene-LU604_RS24905;Name=LU604_RS24905;end_range=4708312,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24905;old_locus_tag=LU604_24905;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4707755 4708312 . - 0 ID=cds-LU604_RS24905;Parent=gene-LU604_RS24905;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=4708312,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU604_RS24905;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4708393 4709616 . + . ID=gene-LU604_RS24910;Name=LU604_RS24910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24910;old_locus_tag=LU604_24910 NZ_CP089942.1 Protein Homology CDS 4708393 4709616 . + 0 ID=cds-WP_233479504.1;Parent=gene-LU604_RS24910;Dbxref=Genbank:WP_233479504.1;Name=WP_233479504.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU604_RS24910;product=IS91 family transposase;protein_id=WP_233479504.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4709760 4709912 . - . ID=gene-LU604_RS24915;Name=LU604_RS24915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24915;old_locus_tag=LU604_24915;partial=true;pseudo=true;start_range=.,4709760 NZ_CP089942.1 Protein Homology CDS 4709760 4709912 . - 0 ID=cds-LU604_RS24915;Parent=gene-LU604_RS24915;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012472779.1;locus_tag=LU604_RS24915;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,4709760;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4709978 4710284 . - . ID=gene-LU604_RS24920;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LU604_RS24920;old_locus_tag=LU604_24920;partial=true;pseudo=true;start_range=.,4709978 NZ_CP089942.1 Protein Homology CDS 4709978 4710284 . - 0 ID=cds-LU604_RS24920;Parent=gene-LU604_RS24920;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011758714.1;locus_tag=LU604_RS24920;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,4709978;transl_table=11 NZ_CP089942.1 RefSeq gene 4710464 4711942 . - . ID=gene-LU604_RS24925;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=LU604_RS24925;old_locus_tag=LU604_24925 NZ_CP089942.1 Protein Homology CDS 4710464 4711942 . - 0 ID=cds-WP_016191545.1;Parent=gene-LU604_RS24925;Dbxref=Genbank:WP_016191545.1;Name=WP_016191545.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=LU604_RS24925;product=ketol-acid reductoisomerase;protein_id=WP_016191545.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4712108 4712989 . + . ID=gene-LU604_RS24930;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=LU604_RS24930;old_locus_tag=LU604_24930 NZ_CP089942.1 Protein Homology CDS 4712108 4712989 . + 0 ID=cds-WP_016191546.1;Parent=gene-LU604_RS24930;Dbxref=Genbank:WP_016191546.1;Name=WP_016191546.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080226.1;locus_tag=LU604_RS24930;product=HTH-type transcriptional activator IlvY;protein_id=WP_016191546.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4713099 4714658 . - . ID=gene-LU604_RS24935;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=LU604_RS24935;old_locus_tag=LU604_24935 NZ_CP089942.1 Protein Homology CDS 4713099 4714658 . - 0 ID=cds-WP_233479505.1;Parent=gene-LU604_RS24935;Dbxref=Genbank:WP_233479505.1;Name=WP_233479505.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191547.1;locus_tag=LU604_RS24935;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_233479505.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4714664 4716514 . - . ID=gene-LU604_RS24940;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=LU604_RS24940;old_locus_tag=LU604_24940 NZ_CP089942.1 Protein Homology CDS 4714664 4716514 . - 0 ID=cds-WP_016191548.1;Parent=gene-LU604_RS24940;Dbxref=Genbank:WP_016191548.1;Name=WP_016191548.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=LU604_RS24940;product=dihydroxy-acid dehydratase;protein_id=WP_016191548.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4716573 4717502 . - . ID=gene-LU604_RS24945;Name=LU604_RS24945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24945;old_locus_tag=LU604_24945 NZ_CP089942.1 Protein Homology CDS 4716573 4717502 . - 0 ID=cds-WP_016191549.1;Parent=gene-LU604_RS24945;Dbxref=Genbank:WP_016191549.1;Name=WP_016191549.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191549.1;locus_tag=LU604_RS24945;product=branched-chain amino acid transaminase;protein_id=WP_016191549.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4717521 4717778 . - . ID=gene-LU604_RS24950;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=LU604_RS24950;old_locus_tag=LU604_24950 NZ_CP089942.1 Protein Homology CDS 4717521 4717778 . - 0 ID=cds-WP_016191550.1;Parent=gene-LU604_RS24950;Dbxref=Genbank:WP_016191550.1;Name=WP_016191550.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800629.1;locus_tag=LU604_RS24950;product=acetolactate synthase 2 small subunit;protein_id=WP_016191550.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4717775 4719421 . - . ID=gene-LU604_RS24955;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=LU604_RS24955;old_locus_tag=LU604_24955 NZ_CP089942.1 Protein Homology CDS 4717775 4719421 . - 0 ID=cds-WP_233480877.1;Parent=gene-LU604_RS24955;Dbxref=Genbank:WP_233480877.1;Name=WP_233480877.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212017.1;locus_tag=LU604_RS24955;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_233480877.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4719562 4719660 . - . ID=gene-LU604_RS24960;Name=LU604_RS24960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24960;old_locus_tag=LU604_24960 NZ_CP089942.1 Protein Homology CDS 4719562 4719660 . - 0 ID=cds-WP_152664223.1;Parent=gene-LU604_RS24960;Dbxref=Genbank:WP_152664223.1;Name=WP_152664223.1;Ontology_term=GO:0009082;gbkey=CDS;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=LU604_RS24960;product=IlvGEDA operon leader peptide;protein_id=WP_152664223.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4720007 4721530 . + . ID=gene-LU604_RS24965;Name=LU604_RS24965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24965;old_locus_tag=LU604_24965 NZ_CP089942.1 Protein Homology CDS 4720007 4721530 . + 0 ID=cds-WP_233479506.1;Parent=gene-LU604_RS24965;Dbxref=Genbank:WP_233479506.1;Name=WP_233479506.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015699327.1;locus_tag=LU604_RS24965;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_233479506.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4721715 4722925 . - . ID=gene-LU604_RS24970;Name=LU604_RS24970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24970;old_locus_tag=LU604_24970;pseudo=true NZ_CP089942.1 Protein Homology CDS 4721715 4722925 . - 0 ID=cds-LU604_RS24970;Parent=gene-LU604_RS24970;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS24970;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4723003 4723966 . - . ID=gene-LU604_RS24975;Name=LU604_RS24975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24975;old_locus_tag=LU604_24975;pseudo=true NZ_CP089942.1 Protein Homology CDS 4723003 4723966 . - 0 ID=cds-LU604_RS24975;Parent=gene-LU604_RS24975;Note=frameshifted;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236494.1;locus_tag=LU604_RS24975;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4724103 4724494 . - . ID=gene-LU604_RS24980;Name=LU604_RS24980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS24980;old_locus_tag=LU604_24980;partial=true;pseudo=true;start_range=.,4724103 NZ_CP089942.1 Protein Homology CDS 4724103 4724494 . - 0 ID=cds-LU604_RS24980;Parent=gene-LU604_RS24980;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=LU604_RS24980;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,4724103;transl_table=11 NZ_CP089942.1 RefSeq gene 4724744 4725082 . - . ID=gene-LU604_RS24985;Name=LU604_RS24985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24985;old_locus_tag=LU604_24985 NZ_CP089942.1 Protein Homology CDS 4724744 4725082 . - 0 ID=cds-WP_016191555.1;Parent=gene-LU604_RS24985;Dbxref=Genbank:WP_016191555.1;Name=WP_016191555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312726.1;locus_tag=LU604_RS24985;product=DUF413 domain-containing protein;protein_id=WP_016191555.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4725203 4726027 . + . ID=gene-LU604_RS24990;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=LU604_RS24990;old_locus_tag=LU604_24990 NZ_CP089942.1 Protein Homology CDS 4725203 4726027 . + 0 ID=cds-WP_016191556.1;Parent=gene-LU604_RS24990;Dbxref=Genbank:WP_016191556.1;Name=WP_016191556.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200219.1;locus_tag=LU604_RS24990;product=HTH-type transcriptional regulator HdfR;protein_id=WP_016191556.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4726175 4726872 . + . ID=gene-LU604_RS24995;Name=LU604_RS24995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS24995;old_locus_tag=LU604_24995 NZ_CP089942.1 Protein Homology CDS 4726175 4726424 . + 0 ID=cds-WP_233479508.1;Parent=gene-LU604_RS24995;Dbxref=Genbank:WP_233479508.1;Name=WP_233479508.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS24995;product=IS1 family transposase;protein_id=WP_233479508.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 4726424 4726872 . + 2 ID=cds-WP_233479508.1;Parent=gene-LU604_RS24995;Dbxref=Genbank:WP_233479508.1;Name=WP_233479508.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS24995;product=IS1 family transposase;protein_id=WP_233479508.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4727091 4727166 . - . ID=gene-LU604_RS25000;Name=LU604_RS25000;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS25000;old_locus_tag=LU604_25000 NZ_CP089942.1 tRNAscan-SE tRNA 4727091 4727166 . - . ID=rna-LU604_RS25000;Parent=gene-LU604_RS25000;anticodon=(pos:complement(4727131..4727133));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS25000;product=tRNA-Trp NZ_CP089942.1 tRNAscan-SE exon 4727091 4727166 . - . ID=exon-LU604_RS25000-1;Parent=rna-LU604_RS25000;anticodon=(pos:complement(4727131..4727133));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS25000;product=tRNA-Trp NZ_CP089942.1 RefSeq gene 4727174 4727250 . - . ID=gene-LU604_RS25005;Name=LU604_RS25005;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS25005;old_locus_tag=LU604_25005 NZ_CP089942.1 tRNAscan-SE tRNA 4727174 4727250 . - . ID=rna-LU604_RS25005;Parent=gene-LU604_RS25005;anticodon=(pos:complement(4727214..4727216));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS25005;product=tRNA-Asp NZ_CP089942.1 tRNAscan-SE exon 4727174 4727250 . - . ID=exon-LU604_RS25005-1;Parent=rna-LU604_RS25005;anticodon=(pos:complement(4727214..4727216));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS25005;product=tRNA-Asp NZ_CP089942.1 RefSeq gene 4727362 4727477 . - . ID=gene-LU604_RS25010;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LU604_RS25010;old_locus_tag=LU604_25010 NZ_CP089942.1 cmsearch rRNA 4727362 4727477 . - . ID=rna-LU604_RS25010;Parent=gene-LU604_RS25010;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS25010;product=5S ribosomal RNA NZ_CP089942.1 cmsearch exon 4727362 4727477 . - . ID=exon-LU604_RS25010-1;Parent=rna-LU604_RS25010;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS25010;product=5S ribosomal RNA NZ_CP089942.1 RefSeq gene 4727681 4730583 . - . ID=gene-LU604_RS25015;Name=LU604_RS25015;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU604_RS25015;old_locus_tag=LU604_25015 NZ_CP089942.1 cmsearch rRNA 4727681 4730583 . - . ID=rna-LU604_RS25015;Parent=gene-LU604_RS25015;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS25015;product=23S ribosomal RNA NZ_CP089942.1 cmsearch exon 4727681 4730583 . - . ID=exon-LU604_RS25015-1;Parent=rna-LU604_RS25015;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS25015;product=23S ribosomal RNA NZ_CP089942.1 RefSeq gene 4730787 4730862 . - . ID=gene-LU604_RS25020;Name=LU604_RS25020;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS25020;old_locus_tag=LU604_25020 NZ_CP089942.1 tRNAscan-SE tRNA 4730787 4730862 . - . ID=rna-LU604_RS25020;Parent=gene-LU604_RS25020;anticodon=(pos:complement(4730826..4730828));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS25020;product=tRNA-Glu NZ_CP089942.1 tRNAscan-SE exon 4730787 4730862 . - . ID=exon-LU604_RS25020-1;Parent=rna-LU604_RS25020;anticodon=(pos:complement(4730826..4730828));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS25020;product=tRNA-Glu NZ_CP089942.1 RefSeq gene 4730935 4732476 . - . ID=gene-LU604_RS25025;Name=LU604_RS25025;gbkey=Gene;gene_biotype=rRNA;locus_tag=LU604_RS25025;old_locus_tag=LU604_25025 NZ_CP089942.1 cmsearch rRNA 4730935 4732476 . - . ID=rna-LU604_RS25025;Parent=gene-LU604_RS25025;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS25025;product=16S ribosomal RNA NZ_CP089942.1 cmsearch exon 4730935 4732476 . - . ID=exon-LU604_RS25025-1;Parent=rna-LU604_RS25025;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LU604_RS25025;product=16S ribosomal RNA NZ_CP089942.1 RefSeq gene 4733014 4733271 . + . ID=gene-LU604_RS25030;Name=LU604_RS25030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25030;old_locus_tag=LU604_25030 NZ_CP089942.1 GeneMarkS-2+ CDS 4733014 4733271 . + 0 ID=cds-WP_233481651.1;Parent=gene-LU604_RS25030;Dbxref=Genbank:WP_233481651.1;Name=WP_233481651.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25030;product=hypothetical protein;protein_id=WP_233481651.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4733190 4733886 . + . ID=gene-LU604_RS25035;Name=LU604_RS25035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS25035;old_locus_tag=LU604_25035;pseudo=true NZ_CP089942.1 Protein Homology CDS 4733190 4733886 . + 0 ID=cds-LU604_RS25035;Parent=gene-LU604_RS25035;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013183412.1;locus_tag=LU604_RS25035;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4733983 4734900 . - . ID=gene-LU604_RS25040;Name=LU604_RS25040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25040;old_locus_tag=LU604_25040 NZ_CP089942.1 Protein Homology CDS 4733983 4734900 . - 0 ID=cds-WP_233481431.1;Parent=gene-LU604_RS25040;Dbxref=Genbank:WP_233481431.1;Name=WP_233481431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193008.1;locus_tag=LU604_RS25040;product=glycoside hydrolase family 5 protein;protein_id=WP_233481431.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4734973 4735704 . - . ID=gene-LU604_RS25045;Name=LU604_RS25045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25045;old_locus_tag=LU604_25045 NZ_CP089942.1 Protein Homology CDS 4734973 4735704 . - 0 ID=cds-WP_233481432.1;Parent=gene-LU604_RS25045;Dbxref=Genbank:WP_233481432.1;Name=WP_233481432.1;Ontology_term=GO:0030248;gbkey=CDS;go_function=cellulose binding|0030248||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193009.1;locus_tag=LU604_RS25045;product=expansin EXLX1 family cellulose-binding protein;protein_id=WP_233481432.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4736125 4736258 . + . ID=gene-LU604_RS25050;Name=LU604_RS25050;end_range=4736258,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS25050;old_locus_tag=LU604_25050;partial=true;pseudo=true;start_range=.,4736125 NZ_CP089942.1 Protein Homology CDS 4736125 4736258 . + 0 ID=cds-LU604_RS25050;Parent=gene-LU604_RS25050;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4736258,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612362.1;locus_tag=LU604_RS25050;partial=true;product=IS91 family transposase;pseudo=true;start_range=.,4736125;transl_table=11 NZ_CP089942.1 RefSeq gene 4737097 4737315 . + . ID=gene-LU604_RS25055;Name=LU604_RS25055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25055;old_locus_tag=LU604_25055 NZ_CP089942.1 GeneMarkS-2+ CDS 4737097 4737315 . + 0 ID=cds-WP_233479511.1-2;Parent=gene-LU604_RS25055;Dbxref=Genbank:WP_233479511.1;Name=WP_233479511.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25055;product=hypothetical protein;protein_id=WP_233479511.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4737793 4737942 . + . ID=gene-LU604_RS25060;Name=LU604_RS25060;end_range=4737942,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS25060;old_locus_tag=LU604_25060;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4737793 4737942 . + 0 ID=cds-LU604_RS25060;Parent=gene-LU604_RS25060;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4737942,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006674370.1;locus_tag=LU604_RS25060;partial=true;product=replicase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4738026 4738723 . + . ID=gene-LU604_RS25065;Name=LU604_RS25065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25065;old_locus_tag=LU604_25065 NZ_CP089942.1 Protein Homology CDS 4738026 4738275 . + 0 ID=cds-WP_233481433.1;Parent=gene-LU604_RS25065;Dbxref=Genbank:WP_233481433.1;Name=WP_233481433.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS25065;product=IS1 family transposase;protein_id=WP_233481433.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 4738275 4738723 . + 2 ID=cds-WP_233481433.1;Parent=gene-LU604_RS25065;Dbxref=Genbank:WP_233481433.1;Name=WP_233481433.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS25065;product=IS1 family transposase;protein_id=WP_233481433.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4738742 4738836 . - . ID=gene-LU604_RS25070;Name=LU604_RS25070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS25070;old_locus_tag=LU604_25070;partial=true;pseudo=true;start_range=.,4738742 NZ_CP089942.1 Protein Homology CDS 4738742 4738836 . - 0 ID=cds-LU604_RS25070;Parent=gene-LU604_RS25070;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=LU604_RS25070;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,4738742;transl_table=11 NZ_CP089942.1 RefSeq gene 4739468 4739836 . + . ID=gene-LU604_RS25075;Name=LU604_RS25075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25075;old_locus_tag=LU604_25075 NZ_CP089942.1 GeneMarkS-2+ CDS 4739468 4739836 . + 0 ID=cds-WP_233479513.1;Parent=gene-LU604_RS25075;Dbxref=Genbank:WP_233479513.1;Name=WP_233479513.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25075;product=hypothetical protein;protein_id=WP_233479513.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4739996 4740223 . - . ID=gene-LU604_RS25080;Name=LU604_RS25080;end_range=4740223,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS25080;old_locus_tag=LU604_25080;partial=true;pseudo=true NZ_CP089942.1 Protein Homology CDS 4739996 4740223 . - 0 ID=cds-LU604_RS25080;Parent=gene-LU604_RS25080;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4740223,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=LU604_RS25080;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4740339 4740517 . + . ID=gene-LU604_RS25085;Name=LU604_RS25085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS25085;old_locus_tag=LU604_25085;pseudo=true NZ_CP089942.1 Protein Homology CDS 4740339 4740517 . + 0 ID=cds-LU604_RS25085;Parent=gene-LU604_RS25085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322936.1;locus_tag=LU604_RS25085;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4740526 4741726 . + . ID=gene-LU604_RS25090;Name=LU604_RS25090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25090;old_locus_tag=LU604_25090 NZ_CP089942.1 Protein Homology CDS 4740526 4741353 . + 0 ID=cds-WP_233478723.1-8;Parent=gene-LU604_RS25090;Dbxref=Genbank:WP_233478723.1;Name=WP_233478723.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS25090;product=IS91 family transposase;protein_id=WP_233478723.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 4741355 4741726 . + 0 ID=cds-WP_233478723.1-8;Parent=gene-LU604_RS25090;Dbxref=Genbank:WP_233478723.1;Name=WP_233478723.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198547.1;locus_tag=LU604_RS25090;product=IS91 family transposase;protein_id=WP_233478723.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4741983 4742531 . + . ID=gene-LU604_RS25095;Name=LU604_RS25095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25095;old_locus_tag=LU604_25095 NZ_CP089942.1 Protein Homology CDS 4741983 4742531 . + 0 ID=cds-WP_233481434.1;Parent=gene-LU604_RS25095;Dbxref=Genbank:WP_233481434.1;Name=WP_233481434.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025677.2;locus_tag=LU604_RS25095;product=transposase zinc-binding domain-containing protein;protein_id=WP_233481434.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4742434 4743207 . + . ID=gene-LU604_RS25100;Name=LU604_RS25100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25100;old_locus_tag=LU604_25100 NZ_CP089942.1 Protein Homology CDS 4742434 4743207 . + 0 ID=cds-WP_233479515.1;Parent=gene-LU604_RS25100;Dbxref=Genbank:WP_233479515.1;Name=WP_233479515.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS25100;product=transposase;protein_id=WP_233479515.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4743294 4743458 . + . ID=gene-LU604_RS25105;Name=LU604_RS25105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25105;old_locus_tag=LU604_25105 NZ_CP089942.1 GeneMarkS-2+ CDS 4743294 4743458 . + 0 ID=cds-WP_233479516.1;Parent=gene-LU604_RS25105;Dbxref=Genbank:WP_233479516.1;Name=WP_233479516.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25105;product=hypothetical protein;protein_id=WP_233479516.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4743565 4744815 . + . ID=gene-LU604_RS25110;Name=LU604_RS25110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25110;old_locus_tag=LU604_25110 NZ_CP089942.1 Protein Homology CDS 4743565 4744815 . + 0 ID=cds-WP_233479517.1;Parent=gene-LU604_RS25110;Dbxref=Genbank:WP_233479517.1;Name=WP_233479517.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012372.2;locus_tag=LU604_RS25110;product=DNA cytosine methyltransferase;protein_id=WP_233479517.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4744808 4745617 . + . ID=gene-LU604_RS25115;Name=LU604_RS25115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25115;old_locus_tag=LU604_25115 NZ_CP089942.1 GeneMarkS-2+ CDS 4744808 4745617 . + 0 ID=cds-WP_233479518.1;Parent=gene-LU604_RS25115;Dbxref=Genbank:WP_233479518.1;Name=WP_233479518.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25115;product=hypothetical protein;protein_id=WP_233479518.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4746270 4746544 . - . ID=gene-LU604_RS25120;Name=LU604_RS25120;end_range=4746544,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS25120;old_locus_tag=LU604_25120;partial=true;pseudo=true;start_range=.,4746270 NZ_CP089942.1 Protein Homology CDS 4746270 4746544 . - 0 ID=cds-LU604_RS25120;Parent=gene-LU604_RS25120;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4746544,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000817271.1;locus_tag=LU604_RS25120;partial=true;product=transposase;pseudo=true;start_range=.,4746270;transl_table=11 NZ_CP089942.1 RefSeq gene 4746560 4747257 . - . ID=gene-LU604_RS25125;Name=LU604_RS25125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25125;old_locus_tag=LU604_25125 NZ_CP089942.1 Protein Homology CDS 4747008 4747257 . - 0 ID=cds-WP_233481435.1;Parent=gene-LU604_RS25125;Dbxref=Genbank:WP_233481435.1;Name=WP_233481435.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS25125;product=IS1 family transposase;protein_id=WP_233481435.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 4746560 4747008 . - 2 ID=cds-WP_233481435.1;Parent=gene-LU604_RS25125;Dbxref=Genbank:WP_233481435.1;Name=WP_233481435.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS25125;product=IS1 family transposase;protein_id=WP_233481435.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4747390 4748364 . + . ID=gene-LU604_RS25130;Name=LU604_RS25130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25130;old_locus_tag=LU604_25130 NZ_CP089942.1 Protein Homology CDS 4747390 4748364 . + 0 ID=cds-WP_233479520.1;Parent=gene-LU604_RS25130;Dbxref=Genbank:WP_233479520.1;Name=WP_233479520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122497.1;locus_tag=LU604_RS25130;product=recombinase family protein;protein_id=WP_233479520.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4748473 4749513 . - . ID=gene-LU604_RS25135;Name=LU604_RS25135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25135;old_locus_tag=LU604_25135 NZ_CP089942.1 Protein Homology CDS 4748473 4749513 . - 0 ID=cds-WP_233479095.1-4;Parent=gene-LU604_RS25135;Dbxref=Genbank:WP_233479095.1;Name=WP_233479095.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS25135;product=IS481 family transposase;protein_id=WP_233479095.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4750132 4750809 . - . ID=gene-LU604_RS25140;Name=LU604_RS25140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25140;old_locus_tag=LU604_25140 NZ_CP089942.1 GeneMarkS-2+ CDS 4750132 4750809 . - 0 ID=cds-WP_233481436.1;Parent=gene-LU604_RS25140;Dbxref=Genbank:WP_233481436.1;Name=WP_233481436.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25140;product=hypothetical protein;protein_id=WP_233481436.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4750831 4751951 . + . ID=gene-LU604_RS25145;Name=LU604_RS25145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25145;old_locus_tag=LU604_25145 NZ_CP089942.1 Protein Homology CDS 4750831 4751089 . + 0 ID=cds-WP_152664246.1;Parent=gene-LU604_RS25145;Dbxref=Genbank:WP_152664246.1;Name=WP_152664246.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS25145;product=IS3 family transposase;protein_id=WP_152664246.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 4751089 4751951 . + 2 ID=cds-WP_152664246.1;Parent=gene-LU604_RS25145;Dbxref=Genbank:WP_152664246.1;Name=WP_152664246.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=LU604_RS25145;product=IS3 family transposase;protein_id=WP_152664246.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4752397 4752588 . + . ID=gene-LU604_RS25150;Name=LU604_RS25150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25150;old_locus_tag=LU604_25150 NZ_CP089942.1 GeneMarkS-2+ CDS 4752397 4752588 . + 0 ID=cds-WP_233479523.1;Parent=gene-LU604_RS25150;Dbxref=Genbank:WP_233479523.1;Name=WP_233479523.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25150;product=hypothetical protein;protein_id=WP_233479523.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4752683 4753249 . + . ID=gene-LU604_RS25155;Name=LU604_RS25155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25155;old_locus_tag=LU604_25155 NZ_CP089942.1 Protein Homology CDS 4752683 4753249 . + 0 ID=cds-WP_233479524.1;Parent=gene-LU604_RS25155;Dbxref=Genbank:WP_233479524.1;Name=WP_233479524.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS25155;product=transposase;protein_id=WP_233479524.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4753227 4753442 . + . ID=gene-LU604_RS25160;Name=LU604_RS25160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25160;old_locus_tag=LU604_25160 NZ_CP089942.1 GeneMarkS-2+ CDS 4753227 4753442 . + 0 ID=cds-WP_072052855.1;Parent=gene-LU604_RS25160;Dbxref=Genbank:WP_072052855.1;Name=WP_072052855.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25160;product=hypothetical protein;protein_id=WP_072052855.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4753703 4754452 . + . ID=gene-LU604_RS25165;Name=LU604_RS25165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25165;old_locus_tag=LU604_25165 NZ_CP089942.1 Protein Homology CDS 4753703 4754452 . + 0 ID=cds-WP_233479525.1;Parent=gene-LU604_RS25165;Dbxref=Genbank:WP_233479525.1;Name=WP_233479525.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS25165;product=transposase;protein_id=WP_233479525.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4754607 4755041 . - . ID=gene-LU604_RS25170;Name=LU604_RS25170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25170;old_locus_tag=LU604_25170 NZ_CP089942.1 Protein Homology CDS 4754607 4755041 . - 0 ID=cds-WP_233479526.1;Parent=gene-LU604_RS25170;Dbxref=Genbank:WP_233479526.1;Name=WP_233479526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192378.1;locus_tag=LU604_RS25170;product=hypothetical protein;protein_id=WP_233479526.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4755038 4755742 . - . ID=gene-LU604_RS25175;Name=LU604_RS25175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25175;old_locus_tag=LU604_25175 NZ_CP089942.1 Protein Homology CDS 4755038 4755742 . - 0 ID=cds-WP_233479527.1;Parent=gene-LU604_RS25175;Dbxref=Genbank:WP_233479527.1;Name=WP_233479527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014539164.1;locus_tag=LU604_RS25175;product=hypothetical protein;protein_id=WP_233479527.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4755879 4756090 . + . ID=gene-LU604_RS25180;Name=LU604_RS25180;end_range=4756090,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS25180;old_locus_tag=LU604_25180;partial=true;pseudo=true;start_range=.,4755879 NZ_CP089942.1 Protein Homology CDS 4755879 4756090 . + 0 ID=cds-LU604_RS25180;Parent=gene-LU604_RS25180;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4756090,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=LU604_RS25180;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,4755879;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4756295 4757505 . + . ID=gene-LU604_RS25185;Name=LU604_RS25185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS25185;old_locus_tag=LU604_25185;pseudo=true NZ_CP089942.1 Protein Homology CDS 4756295 4757505 . + 0 ID=cds-LU604_RS25185;Parent=gene-LU604_RS25185;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS25185;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4757909 4758631 . + . ID=gene-LU604_RS25190;Name=LU604_RS25190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25190;old_locus_tag=LU604_25190 NZ_CP089942.1 Protein Homology CDS 4757909 4758631 . + 0 ID=cds-WP_233479528.1;Parent=gene-LU604_RS25190;Dbxref=Genbank:WP_233479528.1;Name=WP_233479528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192375.1;locus_tag=LU604_RS25190;product=phosphopantetheinyl transferase;protein_id=WP_233479528.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4758770 4758931 . - . ID=gene-LU604_RS25195;Name=LU604_RS25195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS25195;old_locus_tag=LU604_25195;partial=true;pseudo=true;start_range=.,4758770 NZ_CP089942.1 Protein Homology CDS 4758770 4758931 . - 0 ID=cds-LU604_RS25195;Parent=gene-LU604_RS25195;Note=involved in the transport or adenine%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000106882.1;locus_tag=LU604_RS25195;partial=true;product=NCS2 family permease;pseudo=true;start_range=.,4758770;transl_table=11 NZ_CP089942.1 RefSeq gene 4759275 4759778 . - . ID=gene-LU604_RS25200;Name=LU604_RS25200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25200;old_locus_tag=LU604_25200 NZ_CP089942.1 Protein Homology CDS 4759275 4759778 . - 0 ID=cds-WP_233479529.1;Parent=gene-LU604_RS25200;Dbxref=Genbank:WP_233479529.1;Name=WP_233479529.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU604_RS25200;product=IS1 family transposase;protein_id=WP_233479529.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4759697 4759972 . - . ID=gene-LU604_RS25205;Name=LU604_RS25205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25205;old_locus_tag=LU604_25205 NZ_CP089942.1 Protein Homology CDS 4759697 4759972 . - 0 ID=cds-WP_072052792.1-3;Parent=gene-LU604_RS25205;Dbxref=Genbank:WP_072052792.1;Name=WP_072052792.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU604_RS25205;product=IS1-like element transposase;protein_id=WP_072052792.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4760823 4761269 . + . ID=gene-LU604_RS25210;Name=LU604_RS25210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25210;old_locus_tag=LU604_25210 NZ_CP089942.1 Protein Homology CDS 4760823 4761269 . + 0 ID=cds-WP_233479530.1;Parent=gene-LU604_RS25210;Dbxref=Genbank:WP_233479530.1;Name=WP_233479530.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012698.2;locus_tag=LU604_RS25210;product=winged helix-turn-helix domain-containing protein;protein_id=WP_233479530.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4761380 4762603 . + . ID=gene-LU604_RS25215;Name=LU604_RS25215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25215;old_locus_tag=LU604_25215 NZ_CP089942.1 Protein Homology CDS 4761380 4762603 . + 0 ID=cds-WP_233479531.1;Parent=gene-LU604_RS25215;Dbxref=Genbank:WP_233479531.1;Name=WP_233479531.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU604_RS25215;product=IS91 family transposase;protein_id=WP_233479531.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4762832 4763380 . + . ID=gene-LU604_RS25220;Name=LU604_RS25220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25220;old_locus_tag=LU604_25220 NZ_CP089942.1 Protein Homology CDS 4762832 4763380 . + 0 ID=cds-WP_233479514.1;Parent=gene-LU604_RS25220;Dbxref=Genbank:WP_233479514.1;Name=WP_233479514.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025677.2;locus_tag=LU604_RS25220;product=transposase zinc-binding domain-containing protein;protein_id=WP_233479514.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4763283 4764056 . + . ID=gene-LU604_RS25225;Name=LU604_RS25225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25225;old_locus_tag=LU604_25225 NZ_CP089942.1 GeneMarkS-2+ CDS 4763283 4764056 . + 0 ID=cds-WP_233479515.1-2;Parent=gene-LU604_RS25225;Dbxref=Genbank:WP_233479515.1;Name=WP_233479515.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25225;product=transposase;protein_id=WP_233479515.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4764148 4766259 . + . ID=gene-LU604_RS25230;Name=ovoA;gbkey=Gene;gene=ovoA;gene_biotype=pseudogene;locus_tag=LU604_RS25230;old_locus_tag=LU604_25230;pseudo=true NZ_CP089942.1 Protein Homology CDS 4764148 4766259 . + 0 ID=cds-LU604_RS25230;Parent=gene-LU604_RS25230;Note=internal stop;gbkey=CDS;gene=ovoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800280.1;locus_tag=LU604_RS25230;product=5-histidylcysteine sulfoxide synthase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4766380 4766841 . + . ID=gene-LU604_RS25235;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=LU604_RS25235;old_locus_tag=LU604_25235 NZ_CP089942.1 Protein Homology CDS 4766380 4766841 . + 0 ID=cds-WP_016192443.1;Parent=gene-LU604_RS25235;Dbxref=Genbank:WP_016192443.1;Name=WP_016192443.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359557.1;locus_tag=LU604_RS25235;product=transcriptional regulator AsnC;protein_id=WP_016192443.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4766930 4768198 . - . ID=gene-LU604_RS25240;Name=LU604_RS25240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25240;old_locus_tag=LU604_25240 NZ_CP089942.1 Protein Homology CDS 4766930 4768198 . - 0 ID=cds-WP_233479532.1;Parent=gene-LU604_RS25240;Dbxref=Genbank:WP_233479532.1;Name=WP_233479532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008924632.1;locus_tag=LU604_RS25240;product=hypothetical protein;protein_id=WP_233479532.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4768198 4770627 . - . ID=gene-LU604_RS25245;Name=LU604_RS25245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25245;old_locus_tag=LU604_25245 NZ_CP089942.1 Protein Homology CDS 4768198 4770627 . - 0 ID=cds-WP_233481437.1;Parent=gene-LU604_RS25245;Dbxref=Genbank:WP_233481437.1;Name=WP_233481437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016857075.1;locus_tag=LU604_RS25245;product=TcfC E-set like domain-containing protein;protein_id=WP_233481437.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4770690 4771217 . - . ID=gene-LU604_RS25250;Name=LU604_RS25250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25250;old_locus_tag=LU604_25250 NZ_CP089942.1 Protein Homology CDS 4770690 4771217 . - 0 ID=cds-WP_016192441.1;Parent=gene-LU604_RS25250;Dbxref=Genbank:WP_016192441.1;Name=WP_016192441.1;Ontology_term=GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006808838.1;locus_tag=LU604_RS25250;product=CS1 type fimbrial major subunit;protein_id=WP_016192441.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4771291 4772064 . - . ID=gene-LU604_RS25255;Name=LU604_RS25255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25255;old_locus_tag=LU604_25255 NZ_CP089942.1 Protein Homology CDS 4771291 4772064 . - 0 ID=cds-WP_233480878.1;Parent=gene-LU604_RS25255;Dbxref=Genbank:WP_233480878.1;Name=WP_233480878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192440.1;locus_tag=LU604_RS25255;product=hypothetical protein;protein_id=WP_233480878.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4772505 4772717 . - . ID=gene-LU604_RS25260;Name=LU604_RS25260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25260;old_locus_tag=LU604_25260 NZ_CP089942.1 GeneMarkS-2+ CDS 4772505 4772717 . - 0 ID=cds-WP_233479534.1;Parent=gene-LU604_RS25260;Dbxref=Genbank:WP_233479534.1;Name=WP_233479534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25260;product=hypothetical protein;protein_id=WP_233479534.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4772748 4773971 . + . ID=gene-LU604_RS25265;Name=LU604_RS25265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25265;old_locus_tag=LU604_25265 NZ_CP089942.1 Protein Homology CDS 4772748 4773971 . + 0 ID=cds-WP_233479535.1;Parent=gene-LU604_RS25265;Dbxref=Genbank:WP_233479535.1;Name=WP_233479535.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU604_RS25265;product=IS91 family transposase;protein_id=WP_233479535.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4774149 4774499 . - . ID=gene-LU604_RS25270;Name=LU604_RS25270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25270;old_locus_tag=LU604_25270 NZ_CP089942.1 GeneMarkS-2+ CDS 4774149 4774499 . - 0 ID=cds-WP_233479536.1;Parent=gene-LU604_RS25270;Dbxref=Genbank:WP_233479536.1;Name=WP_233479536.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25270;product=hypothetical protein;protein_id=WP_233479536.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4774486 4775133 . - . ID=gene-LU604_RS25275;Name=LU604_RS25275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25275;old_locus_tag=LU604_25275 NZ_CP089942.1 Protein Homology CDS 4774486 4775133 . - 0 ID=cds-WP_233479537.1;Parent=gene-LU604_RS25275;Dbxref=Genbank:WP_233479537.1;Name=WP_233479537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016190639.1;locus_tag=LU604_RS25275;product=hypothetical protein;protein_id=WP_233479537.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4775329 4776261 . + . ID=gene-LU604_RS25280;Name=LU604_RS25280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25280;old_locus_tag=LU604_25280 NZ_CP089942.1 Protein Homology CDS 4775329 4776261 . + 0 ID=cds-WP_233481439.1;Parent=gene-LU604_RS25280;Dbxref=Genbank:WP_233481439.1;Name=WP_233481439.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU604_RS25280;product=IS91 family transposase;protein_id=WP_233481439.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4776218 4776553 . + . ID=gene-LU604_RS27135;Name=LU604_RS27135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27135 NZ_CP089942.1 Protein Homology CDS 4776218 4776553 . + 0 ID=cds-WP_233481440.1-4;Parent=gene-LU604_RS27135;Dbxref=Genbank:WP_233481440.1;Name=WP_233481440.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS27135;product=hypothetical protein;protein_id=WP_233481440.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4776866 4777285 . - . ID=gene-LU604_RS25285;Name=LU604_RS25285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25285;old_locus_tag=LU604_25285 NZ_CP089942.1 Protein Homology CDS 4776866 4777285 . - 0 ID=cds-WP_016192407.1;Parent=gene-LU604_RS25285;Dbxref=Genbank:WP_016192407.1;Name=WP_016192407.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=LU604_RS25285;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_016192407.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4777310 4778692 . - . ID=gene-LU604_RS25290;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=LU604_RS25290;old_locus_tag=LU604_25290 NZ_CP089942.1 Protein Homology CDS 4777310 4778692 . - 0 ID=cds-WP_016192408.1;Parent=gene-LU604_RS25290;Dbxref=Genbank:WP_016192408.1;Name=WP_016192408.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=LU604_RS25290;product=F0F1 ATP synthase subunit beta;protein_id=WP_016192408.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4778835 4779704 . - . ID=gene-LU604_RS25295;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=LU604_RS25295;old_locus_tag=LU604_25295 NZ_CP089942.1 Protein Homology CDS 4778835 4779704 . - 0 ID=cds-WP_016192409.1;Parent=gene-LU604_RS25295;Dbxref=Genbank:WP_016192409.1;Name=WP_016192409.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462765.1;locus_tag=LU604_RS25295;product=F0F1 ATP synthase subunit gamma;protein_id=WP_016192409.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4779759 4781300 . - . ID=gene-LU604_RS25300;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=LU604_RS25300;old_locus_tag=LU604_25300 NZ_CP089942.1 Protein Homology CDS 4779759 4781300 . - 0 ID=cds-WP_016192410.1;Parent=gene-LU604_RS25300;Dbxref=Genbank:WP_016192410.1;Name=WP_016192410.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=LU604_RS25300;product=F0F1 ATP synthase subunit alpha;protein_id=WP_016192410.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4781315 4781848 . - . ID=gene-LU604_RS25305;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=LU604_RS25305;old_locus_tag=LU604_25305 NZ_CP089942.1 Protein Homology CDS 4781315 4781848 . - 0 ID=cds-WP_233479539.1;Parent=gene-LU604_RS25305;Dbxref=Genbank:WP_233479539.1;Name=WP_233479539.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=LU604_RS25305;product=F0F1 ATP synthase subunit delta;protein_id=WP_233479539.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4781863 4782333 . - . ID=gene-LU604_RS25310;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=LU604_RS25310;old_locus_tag=LU604_25310 NZ_CP089942.1 Protein Homology CDS 4781863 4782333 . - 0 ID=cds-WP_233479540.1;Parent=gene-LU604_RS25310;Dbxref=Genbank:WP_233479540.1;Name=WP_233479540.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=LU604_RS25310;product=F0F1 ATP synthase subunit B;protein_id=WP_233479540.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4782428 4782670 . - . ID=gene-LU604_RS25315;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=LU604_RS25315;old_locus_tag=LU604_25315 NZ_CP089942.1 Protein Homology CDS 4782428 4782670 . - 0 ID=cds-WP_016192413.1;Parent=gene-LU604_RS25315;Dbxref=Genbank:WP_016192413.1;Name=WP_016192413.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708948.1;locus_tag=LU604_RS25315;product=F0F1 ATP synthase subunit C;protein_id=WP_016192413.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4782720 4783538 . - . ID=gene-LU604_RS25320;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=LU604_RS25320;old_locus_tag=LU604_25320 NZ_CP089942.1 Protein Homology CDS 4782720 4783538 . - 0 ID=cds-WP_016192414.1;Parent=gene-LU604_RS25320;Dbxref=Genbank:WP_016192414.1;Name=WP_016192414.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004173675.1;locus_tag=LU604_RS25320;product=F0F1 ATP synthase subunit A;protein_id=WP_016192414.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4783547 4783927 . - . ID=gene-LU604_RS25325;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=LU604_RS25325;old_locus_tag=LU604_25325 NZ_CP089942.1 Protein Homology CDS 4783547 4783927 . - 0 ID=cds-WP_016192415.1;Parent=gene-LU604_RS25325;Dbxref=Genbank:WP_016192415.1;Name=WP_016192415.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161259.1;locus_tag=LU604_RS25325;product=F0F1 ATP synthase subunit I;protein_id=WP_016192415.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4784736 4785356 . - . ID=gene-LU604_RS25330;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=LU604_RS25330;old_locus_tag=LU604_25330 NZ_CP089942.1 Protein Homology CDS 4784736 4785356 . - 0 ID=cds-WP_233479541.1;Parent=gene-LU604_RS25330;Dbxref=Genbank:WP_233479541.1;Name=WP_233479541.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192416.1;locus_tag=LU604_RS25330;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_233479541.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4785435 4787324 . - . ID=gene-LU604_RS25335;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=LU604_RS25335;old_locus_tag=LU604_25335 NZ_CP089942.1 Protein Homology CDS 4785435 4787324 . - 0 ID=cds-WP_233479542.1;Parent=gene-LU604_RS25335;Dbxref=Genbank:WP_233479542.1;Name=WP_233479542.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192417.1;locus_tag=LU604_RS25335;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_233479542.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4787761 4788204 . - . ID=gene-LU604_RS25340;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=LU604_RS25340;old_locus_tag=LU604_25340 NZ_CP089942.1 Protein Homology CDS 4787761 4788204 . - 0 ID=cds-WP_016192418.1;Parent=gene-LU604_RS25340;Dbxref=Genbank:WP_016192418.1;Name=WP_016192418.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200041.1;locus_tag=LU604_RS25340;product=FMN-binding protein MioC;protein_id=WP_016192418.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4788533 4788868 . - . ID=gene-LU604_RS25345;Name=LU604_RS25345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25345;old_locus_tag=LU604_25345 NZ_CP089942.1 Protein Homology CDS 4788533 4788868 . - 0 ID=cds-WP_233481438.1;Parent=gene-LU604_RS25345;Dbxref=Genbank:WP_233481438.1;Name=WP_233481438.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS25345;product=hypothetical protein;protein_id=WP_233481438.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4788825 4789757 . - . ID=gene-LU604_RS25350;Name=LU604_RS25350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25350;old_locus_tag=LU604_25350 NZ_CP089942.1 Protein Homology CDS 4788825 4789757 . - 0 ID=cds-WP_233481439.1-2;Parent=gene-LU604_RS25350;Dbxref=Genbank:WP_233481439.1;Name=WP_233481439.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU604_RS25350;product=IS91 family transposase;protein_id=WP_233481439.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4790005 4791468 . - . ID=gene-LU604_RS25355;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=LU604_RS25355;old_locus_tag=LU604_25355 NZ_CP089942.1 Protein Homology CDS 4790005 4791468 . - 0 ID=cds-WP_233479544.1;Parent=gene-LU604_RS25355;Dbxref=Genbank:WP_233479544.1;Name=WP_233479544.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106775.1;locus_tag=LU604_RS25355;product=ATPase RavA stimulator ViaA;protein_id=WP_233479544.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4791465 4792958 . - . ID=gene-LU604_RS25360;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=LU604_RS25360;old_locus_tag=LU604_25360 NZ_CP089942.1 Protein Homology CDS 4791465 4792958 . - 0 ID=cds-WP_233479545.1;Parent=gene-LU604_RS25360;Dbxref=Genbank:WP_233479545.1;Name=WP_233479545.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594928.1;locus_tag=LU604_RS25360;product=ATPase RavA;protein_id=WP_233479545.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4793220 4795088 . + . ID=gene-LU604_RS25365;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=LU604_RS25365;old_locus_tag=LU604_25365 NZ_CP089942.1 Protein Homology CDS 4793220 4795088 . + 0 ID=cds-WP_233479546.1;Parent=gene-LU604_RS25365;Dbxref=Genbank:WP_233479546.1;Name=WP_233479546.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224306.1;locus_tag=LU604_RS25365;product=low affinity potassium transporter Kup;protein_id=WP_233479546.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4795473 4795709 . - . ID=gene-LU604_RS25370;Name=LU604_RS25370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25370;old_locus_tag=LU604_25370 NZ_CP089942.1 GeneMarkS-2+ CDS 4795473 4795709 . - 0 ID=cds-WP_233479547.1;Parent=gene-LU604_RS25370;Dbxref=Genbank:WP_233479547.1;Name=WP_233479547.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25370;product=hypothetical protein;protein_id=WP_233479547.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4795706 4796275 . - . ID=gene-LU604_RS25375;Name=LU604_RS25375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS25375;old_locus_tag=LU604_25375;pseudo=true NZ_CP089942.1 Protein Homology CDS 4795706 4796275 . - 0 ID=cds-LU604_RS25375;Parent=gene-LU604_RS25375;Note=internal stop;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS25375;product=transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4796830 4797369 . - . ID=gene-LU604_RS27140;Name=LU604_RS27140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27140 NZ_CP089942.1 Protein Homology CDS 4796830 4797369 . - 0 ID=cds-WP_252120242.1-2;Parent=gene-LU604_RS27140;Dbxref=Genbank:WP_252120242.1;Name=WP_252120242.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS27140;product=transposase;protein_id=WP_252120242.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4797494 4798045 . - . ID=gene-LU604_RS27145;Name=LU604_RS27145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS27145;partial=true;pseudo=true;start_range=.,4797494 NZ_CP089942.1 Protein Homology CDS 4797494 4798045 . - 0 ID=cds-LU604_RS27145;Parent=gene-LU604_RS27145;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025677.2;locus_tag=LU604_RS27145;partial=true;product=transposase zinc-binding domain-containing protein;pseudo=true;start_range=.,4797494;transl_table=11 NZ_CP089942.1 RefSeq gene 4798371 4799309 . + . ID=gene-LU604_RS25385;Name=LU604_RS25385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25385;old_locus_tag=LU604_25385 NZ_CP089942.1 Protein Homology CDS 4798371 4799309 . + 0 ID=cds-WP_233480880.1;Parent=gene-LU604_RS25385;Dbxref=Genbank:WP_233480880.1;Name=WP_233480880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026564.1;locus_tag=LU604_RS25385;product=omptin family outer membrane protease;protein_id=WP_233480880.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4799992 4800327 . - . ID=gene-LU604_RS25390;Name=LU604_RS25390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25390;old_locus_tag=LU604_25390 NZ_CP089942.1 Protein Homology CDS 4799992 4800327 . - 0 ID=cds-WP_233481440.1-5;Parent=gene-LU604_RS25390;Dbxref=Genbank:WP_233481440.1;Name=WP_233481440.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS25390;product=hypothetical protein;protein_id=WP_233481440.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4800284 4801216 . - . ID=gene-LU604_RS25395;Name=LU604_RS25395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25395;old_locus_tag=LU604_25395 NZ_CP089942.1 Protein Homology CDS 4800284 4801216 . - 0 ID=cds-WP_233481441.1;Parent=gene-LU604_RS25395;Dbxref=Genbank:WP_233481441.1;Name=WP_233481441.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU604_RS25395;product=IS91 family transposase;protein_id=WP_233481441.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4801729 4803099 . + . ID=gene-LU604_RS25400;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=LU604_RS25400;old_locus_tag=LU604_25400 NZ_CP089942.1 Protein Homology CDS 4801729 4803099 . + 0 ID=cds-WP_016193005.1;Parent=gene-LU604_RS25400;Dbxref=Genbank:WP_016193005.1;Name=WP_016193005.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012443139.1;locus_tag=LU604_RS25400;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_016193005.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4803262 4805091 . + . ID=gene-LU604_RS25405;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LU604_RS25405;old_locus_tag=LU604_25405 NZ_CP089942.1 Protein Homology CDS 4803262 4805091 . + 0 ID=cds-WP_016193004.1;Parent=gene-LU604_RS25405;Dbxref=Genbank:WP_016193004.1;Name=WP_016193004.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=LU604_RS25405;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_016193004.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4805336 4806376 . + . ID=gene-LU604_RS25410;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=LU604_RS25410;old_locus_tag=LU604_25410 NZ_CP089942.1 Protein Homology CDS 4805336 4806376 . + 0 ID=cds-WP_233479548.1;Parent=gene-LU604_RS25410;Dbxref=Genbank:WP_233479548.1;Name=WP_233479548.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204579.1;locus_tag=LU604_RS25410;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_233479548.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4806459 4807421 . + . ID=gene-LU604_RS25415;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=LU604_RS25415;old_locus_tag=LU604_25415 NZ_CP089942.1 Protein Homology CDS 4806459 4807421 . + 0 ID=cds-WP_016193002.1;Parent=gene-LU604_RS25415;Dbxref=Genbank:WP_016193002.1;Name=WP_016193002.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017349360.1;locus_tag=LU604_RS25415;product=phosphate ABC transporter permease PstC;protein_id=WP_016193002.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4807418 4808305 . + . ID=gene-LU604_RS25420;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=LU604_RS25420;old_locus_tag=LU604_25420 NZ_CP089942.1 Protein Homology CDS 4807418 4808305 . + 0 ID=cds-WP_233479549.1;Parent=gene-LU604_RS25420;Dbxref=Genbank:WP_233479549.1;Name=WP_233479549.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161214.1;locus_tag=LU604_RS25420;product=phosphate ABC transporter permease PstA;protein_id=WP_233479549.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4808349 4809119 . + . ID=gene-LU604_RS25425;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=LU604_RS25425;old_locus_tag=LU604_25425 NZ_CP089942.1 Protein Homology CDS 4808349 4809119 . + 0 ID=cds-WP_016193000.1;Parent=gene-LU604_RS25425;Dbxref=Genbank:WP_016193000.1;Name=WP_016193000.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161212.1;locus_tag=LU604_RS25425;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_016193000.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4809137 4809874 . + . ID=gene-LU604_RS25430;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=LU604_RS25430;old_locus_tag=LU604_25430 NZ_CP089942.1 Protein Homology CDS 4809137 4809874 . + 0 ID=cds-WP_016192999.1;Parent=gene-LU604_RS25430;Dbxref=Genbank:WP_016192999.1;Name=WP_016192999.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=cellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161204.1;locus_tag=LU604_RS25430;product=phosphate signaling complex protein PhoU;protein_id=WP_016192999.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4810274 4811091 . - . ID=gene-LU604_RS25435;Name=LU604_RS25435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS25435;old_locus_tag=LU604_25435;pseudo=true NZ_CP089942.1 Protein Homology CDS 4810274 4811091 . - 0 ID=cds-LU604_RS25435;Parent=gene-LU604_RS25435;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611130.1;locus_tag=LU604_RS25435;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4811545 4812828 . + . ID=gene-LU604_RS25440;Name=LU604_RS25440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25440;old_locus_tag=LU604_25440 NZ_CP089942.1 Protein Homology CDS 4811545 4812828 . + 0 ID=cds-WP_233479550.1;Parent=gene-LU604_RS25440;Dbxref=Genbank:WP_233479550.1;Name=WP_233479550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015698783.1;locus_tag=LU604_RS25440;product=HAAAP family serine/threonine permease;protein_id=WP_233479550.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4813068 4813991 . - . ID=gene-LU604_RS25445;Name=LU604_RS25445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS25445;old_locus_tag=LU604_25445;partial=true;pseudo=true;start_range=.,4813068 NZ_CP089942.1 Protein Homology CDS 4813068 4813991 . - 0 ID=cds-LU604_RS25445;Parent=gene-LU604_RS25445;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947205.1;locus_tag=LU604_RS25445;partial=true;product=transposase;pseudo=true;start_range=.,4813068;transl_table=11 NZ_CP089942.1 RefSeq gene 4814000 4814188 . - . ID=gene-LU604_RS25455;Name=LU604_RS25455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25455;old_locus_tag=LU604_25455 NZ_CP089942.1 Protein Homology CDS 4814000 4814188 . - 0 ID=cds-WP_040465908.1;Parent=gene-LU604_RS25455;Dbxref=Genbank:WP_040465908.1;Name=WP_040465908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322936.1;locus_tag=LU604_RS25455;product=hypothetical protein;protein_id=WP_040465908.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4814606 4815784 . - . ID=gene-LU604_RS25460;Name=LU604_RS25460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25460;old_locus_tag=LU604_25460 NZ_CP089942.1 Protein Homology CDS 4814606 4815784 . - 0 ID=cds-WP_233480882.1;Parent=gene-LU604_RS25460;Dbxref=Genbank:WP_233480882.1;Name=WP_233480882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891232.1;locus_tag=LU604_RS25460;product=MFS transporter;protein_id=WP_233480882.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4816249 4817007 . + . ID=gene-LU604_RS25465;Name=LU604_RS25465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25465;old_locus_tag=LU604_25465 NZ_CP089942.1 Protein Homology CDS 4816249 4817007 . + 0 ID=cds-WP_233479551.1;Parent=gene-LU604_RS25465;Dbxref=Genbank:WP_233479551.1;Name=WP_233479551.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012669.2;locus_tag=LU604_RS25465;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_233479551.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4817042 4818223 . + . ID=gene-LU604_RS25470;Name=LU604_RS25470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25470;old_locus_tag=LU604_25470 NZ_CP089942.1 Protein Homology CDS 4817042 4818223 . + 0 ID=cds-WP_233479552.1;Parent=gene-LU604_RS25470;Dbxref=Genbank:WP_233479552.1;Name=WP_233479552.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=LU604_RS25470;product=MFS transporter;protein_id=WP_233479552.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4818593 4818964 . - . ID=gene-LU604_RS25475;Name=LU604_RS25475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25475;old_locus_tag=LU604_25475 NZ_CP089942.1 Protein Homology CDS 4818593 4818964 . - 0 ID=cds-WP_233481649.1;Parent=gene-LU604_RS25475;Dbxref=Genbank:WP_233481649.1;Name=WP_233481649.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS25475;product=transposase;protein_id=WP_233481649.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4818932 4819153 . + . ID=gene-LU604_RS25480;Name=LU604_RS25480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25480;old_locus_tag=LU604_25480 NZ_CP089942.1 GeneMarkS-2+ CDS 4818932 4819153 . + 0 ID=cds-WP_233481442.1;Parent=gene-LU604_RS25480;Dbxref=Genbank:WP_233481442.1;Name=WP_233481442.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25480;product=hypothetical protein;protein_id=WP_233481442.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4819264 4819767 . - . ID=gene-LU604_RS25485;Name=LU604_RS25485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25485;old_locus_tag=LU604_25485 NZ_CP089942.1 Protein Homology CDS 4819264 4819767 . - 0 ID=cds-WP_233481443.1;Parent=gene-LU604_RS25485;Dbxref=Genbank:WP_233481443.1;Name=WP_233481443.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015365.2;locus_tag=LU604_RS25485;product=IS1 family transposase;protein_id=WP_233481443.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4819686 4819961 . - . ID=gene-LU604_RS25490;Name=LU604_RS25490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25490;old_locus_tag=LU604_25490 NZ_CP089942.1 Protein Homology CDS 4819686 4819961 . - 0 ID=cds-WP_233481444.1;Parent=gene-LU604_RS25490;Dbxref=Genbank:WP_233481444.1;Name=WP_233481444.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.2;locus_tag=LU604_RS25490;product=IS1-like element transposase;protein_id=WP_233481444.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4820021 4820592 . + . ID=gene-LU604_RS25495;Name=LU604_RS25495;end_range=4820592,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS25495;old_locus_tag=LU604_25495;partial=true;pseudo=true;start_range=.,4820021 NZ_CP089942.1 Protein Homology CDS 4820021 4820592 . + 0 ID=cds-LU604_RS25495;Parent=gene-LU604_RS25495;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4820592,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151241.1;locus_tag=LU604_RS25495;partial=true;product=MBL fold metallo-hydrolase;pseudo=true;start_range=.,4820021;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4820601 4821775 . - . ID=gene-LU604_RS25500;Name=LU604_RS25500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS25500;old_locus_tag=LU604_25500;pseudo=true NZ_CP089942.1 Protein Homology CDS 4820601 4821775 . - 0 ID=cds-LU604_RS25500;Parent=gene-LU604_RS25500;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612254.1;locus_tag=LU604_RS25500;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4822230 4822781 . - . ID=gene-LU604_RS25505;Name=LU604_RS25505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25505;old_locus_tag=LU604_25505 NZ_CP089942.1 Protein Homology CDS 4822230 4822781 . - 0 ID=cds-WP_233481445.1;Parent=gene-LU604_RS25505;Dbxref=Genbank:WP_233481445.1;Name=WP_233481445.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.2;locus_tag=LU604_RS25505;product=helix-turn-helix transcriptional regulator;protein_id=WP_233481445.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4822933 4823178 . + . ID=gene-LU604_RS25510;Name=LU604_RS25510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25510;old_locus_tag=LU604_25510 NZ_CP089942.1 Protein Homology CDS 4822933 4823178 . + 0 ID=cds-WP_233479555.1;Parent=gene-LU604_RS25510;Dbxref=Genbank:WP_233479555.1;Name=WP_233479555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239630.1;locus_tag=LU604_RS25510;product=helix-turn-helix domain-containing protein;protein_id=WP_233479555.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4823171 4825162 . + . ID=gene-LU604_RS25515;Name=LU604_RS25515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25515;old_locus_tag=LU604_25515 NZ_CP089942.1 Protein Homology CDS 4823171 4825162 . + 0 ID=cds-WP_233479556.1;Parent=gene-LU604_RS25515;Dbxref=Genbank:WP_233479556.1;Name=WP_233479556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239629.1;locus_tag=LU604_RS25515;product=Mu transposase C-terminal domain-containing protein;protein_id=WP_233479556.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4825229 4826170 . + . ID=gene-LU604_RS25520;Name=LU604_RS25520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25520;old_locus_tag=LU604_25520 NZ_CP089942.1 Protein Homology CDS 4825229 4826170 . + 0 ID=cds-WP_233479557.1;Parent=gene-LU604_RS25520;Dbxref=Genbank:WP_233479557.1;Name=WP_233479557.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024793.2;locus_tag=LU604_RS25520;product=AAA family ATPase;protein_id=WP_233479557.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4826211 4826450 . + . ID=gene-LU604_RS25525;Name=LU604_RS25525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25525;old_locus_tag=LU604_25525 NZ_CP089942.1 Protein Homology CDS 4826211 4826450 . + 0 ID=cds-WP_233479558.1;Parent=gene-LU604_RS25525;Dbxref=Genbank:WP_233479558.1;Name=WP_233479558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000987800.1;locus_tag=LU604_RS25525;product=hypothetical protein;protein_id=WP_233479558.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4826460 4826591 . + . ID=gene-LU604_RS27150;Name=LU604_RS27150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27150 NZ_CP089942.1 GeneMarkS-2+ CDS 4826460 4826591 . + 0 ID=cds-WP_256371731.1;Parent=gene-LU604_RS27150;Dbxref=Genbank:WP_256371731.1;Name=WP_256371731.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS27150;product=hypothetical protein;protein_id=WP_256371731.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4826712 4827329 . + . ID=gene-LU604_RS25530;Name=LU604_RS25530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25530;old_locus_tag=LU604_25530 NZ_CP089942.1 Protein Homology CDS 4826712 4827329 . + 0 ID=cds-WP_233479559.1;Parent=gene-LU604_RS25530;Dbxref=Genbank:WP_233479559.1;Name=WP_233479559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807477.1;locus_tag=LU604_RS25530;product=DUF3164 family protein;protein_id=WP_233479559.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4827413 4827679 . + . ID=gene-LU604_RS25535;Name=LU604_RS25535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25535;old_locus_tag=LU604_25535 NZ_CP089942.1 GeneMarkS-2+ CDS 4827413 4827679 . + 0 ID=cds-WP_233481446.1;Parent=gene-LU604_RS25535;Dbxref=Genbank:WP_233481446.1;Name=WP_233481446.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25535;product=hypothetical protein;protein_id=WP_233481446.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4827672 4828154 . + . ID=gene-LU604_RS25540;Name=LU604_RS25540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25540;old_locus_tag=LU604_25540 NZ_CP089942.1 Protein Homology CDS 4827672 4828154 . + 0 ID=cds-WP_233479561.1;Parent=gene-LU604_RS25540;Dbxref=Genbank:WP_233479561.1;Name=WP_233479561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004114544.1;locus_tag=LU604_RS25540;product=hypothetical protein;protein_id=WP_233479561.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4828151 4828591 . + . ID=gene-LU604_RS25545;Name=LU604_RS25545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25545;old_locus_tag=LU604_25545 NZ_CP089942.1 GeneMarkS-2+ CDS 4828151 4828591 . + 0 ID=cds-WP_233479562.1;Parent=gene-LU604_RS25545;Dbxref=Genbank:WP_233479562.1;Name=WP_233479562.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25545;product=hypothetical protein;protein_id=WP_233479562.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4828588 4828836 . + . ID=gene-LU604_RS25550;Name=LU604_RS25550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25550;old_locus_tag=LU604_25550 NZ_CP089942.1 GeneMarkS-2+ CDS 4828588 4828836 . + 0 ID=cds-WP_233479563.1;Parent=gene-LU604_RS25550;Dbxref=Genbank:WP_233479563.1;Name=WP_233479563.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25550;product=hypothetical protein;protein_id=WP_233479563.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4828833 4829639 . + . ID=gene-LU604_RS25555;Name=LU604_RS25555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25555;old_locus_tag=LU604_25555 NZ_CP089942.1 GeneMarkS-2+ CDS 4828833 4829639 . + 0 ID=cds-WP_233479564.1;Parent=gene-LU604_RS25555;Dbxref=Genbank:WP_233479564.1;Name=WP_233479564.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25555;product=hypothetical protein;protein_id=WP_233479564.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4829639 4829851 . + . ID=gene-LU604_RS25560;Name=LU604_RS25560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25560;old_locus_tag=LU604_25560 NZ_CP089942.1 GeneMarkS-2+ CDS 4829639 4829851 . + 0 ID=cds-WP_233479565.1;Parent=gene-LU604_RS25560;Dbxref=Genbank:WP_233479565.1;Name=WP_233479565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25560;product=hypothetical protein;protein_id=WP_233479565.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4829848 4830294 . + . ID=gene-LU604_RS25565;Name=LU604_RS25565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25565;old_locus_tag=LU604_25565 NZ_CP089942.1 GeneMarkS-2+ CDS 4829848 4830294 . + 0 ID=cds-WP_233479566.1;Parent=gene-LU604_RS25565;Dbxref=Genbank:WP_233479566.1;Name=WP_233479566.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25565;product=hypothetical protein;protein_id=WP_233479566.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4830284 4830781 . + . ID=gene-LU604_RS25570;Name=LU604_RS25570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25570;old_locus_tag=LU604_25570 NZ_CP089942.1 Protein Homology CDS 4830284 4830781 . + 0 ID=cds-WP_233479567.1;Parent=gene-LU604_RS25570;Dbxref=Genbank:WP_233479567.1;Name=WP_233479567.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018011.2;locus_tag=LU604_RS25570;product=regulatory protein GemA;protein_id=WP_233479567.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4830822 4831256 . + . ID=gene-LU604_RS25575;Name=LU604_RS25575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25575;old_locus_tag=LU604_25575 NZ_CP089942.1 GeneMarkS-2+ CDS 4830822 4831256 . + 0 ID=cds-WP_233479568.1;Parent=gene-LU604_RS25575;Dbxref=Genbank:WP_233479568.1;Name=WP_233479568.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25575;product=hypothetical protein;protein_id=WP_233479568.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4831328 4831747 . + . ID=gene-LU604_RS25580;Name=LU604_RS25580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25580;old_locus_tag=LU604_25580 NZ_CP089942.1 Protein Homology CDS 4831328 4831747 . + 0 ID=cds-WP_104446552.1;Parent=gene-LU604_RS25580;Dbxref=Genbank:WP_104446552.1;Name=WP_104446552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010618214.1;locus_tag=LU604_RS25580;product=positive regulator of late transcription;protein_id=WP_104446552.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4831744 4832004 . - . ID=gene-LU604_RS25585;Name=LU604_RS25585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25585;old_locus_tag=LU604_25585 NZ_CP089942.1 GeneMarkS-2+ CDS 4831744 4832004 . - 0 ID=cds-WP_233481447.1;Parent=gene-LU604_RS25585;Dbxref=Genbank:WP_233481447.1;Name=WP_233481447.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25585;product=hypothetical protein;protein_id=WP_233481447.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4832033 4832464 . + . ID=gene-LU604_RS25590;Name=LU604_RS25590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25590;old_locus_tag=LU604_25590 NZ_CP089942.1 Protein Homology CDS 4832033 4832464 . + 0 ID=cds-WP_233479570.1;Parent=gene-LU604_RS25590;Dbxref=Genbank:WP_233479570.1;Name=WP_233479570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509679.1;locus_tag=LU604_RS25590;product=lysozyme;protein_id=WP_233479570.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4832451 4832837 . + . ID=gene-LU604_RS25595;Name=LU604_RS25595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25595;old_locus_tag=LU604_25595 NZ_CP089942.1 GeneMarkS-2+ CDS 4832451 4832837 . + 0 ID=cds-WP_233479571.1;Parent=gene-LU604_RS25595;Dbxref=Genbank:WP_233479571.1;Name=WP_233479571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25595;product=DUF2570 domain-containing protein;protein_id=WP_233479571.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4832996 4833193 . + . ID=gene-LU604_RS25600;Name=LU604_RS25600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25600;old_locus_tag=LU604_25600 NZ_CP089942.1 GeneMarkS-2+ CDS 4832996 4833193 . + 0 ID=cds-WP_233479572.1;Parent=gene-LU604_RS25600;Dbxref=Genbank:WP_233479572.1;Name=WP_233479572.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25600;product=hypothetical protein;protein_id=WP_233479572.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4833195 4833491 . + . ID=gene-LU604_RS25605;Name=LU604_RS25605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25605;old_locus_tag=LU604_25605 NZ_CP089942.1 Protein Homology CDS 4833195 4833491 . + 0 ID=cds-WP_202188574.1;Parent=gene-LU604_RS25605;Dbxref=Genbank:WP_202188574.1;Name=WP_202188574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000364295.1;locus_tag=LU604_RS25605;product=DUF2730 family protein;protein_id=WP_202188574.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4833491 4833778 . + . ID=gene-LU604_RS25610;Name=LU604_RS25610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25610;old_locus_tag=LU604_25610 NZ_CP089942.1 Protein Homology CDS 4833491 4833778 . + 0 ID=cds-WP_104446548.1;Parent=gene-LU604_RS25610;Dbxref=Genbank:WP_104446548.1;Name=WP_104446548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001240855.1;locus_tag=LU604_RS25610;product=hypothetical protein;protein_id=WP_104446548.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4833788 4834366 . + . ID=gene-LU604_RS25615;Name=LU604_RS25615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25615;old_locus_tag=LU604_25615 NZ_CP089942.1 Protein Homology CDS 4833788 4834366 . + 0 ID=cds-WP_233480885.1;Parent=gene-LU604_RS25615;Dbxref=Genbank:WP_233480885.1;Name=WP_233480885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375395.1;locus_tag=LU604_RS25615;product=DUF3486 family protein;protein_id=WP_233480885.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4834368 4836033 . + . ID=gene-LU604_RS25620;Name=LU604_RS25620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS25620;old_locus_tag=LU604_25620;pseudo=true NZ_CP089942.1 Protein Homology CDS 4834368 4836033 . + 0 ID=cds-LU604_RS25620;Parent=gene-LU604_RS25620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104672.1;locus_tag=LU604_RS25620;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4836033 4837577 . + . ID=gene-LU604_RS25625;Name=LU604_RS25625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25625;old_locus_tag=LU604_25625 NZ_CP089942.1 Protein Homology CDS 4836033 4837577 . + 0 ID=cds-WP_233479573.1;Parent=gene-LU604_RS25625;Dbxref=Genbank:WP_233479573.1;Name=WP_233479573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001689834.1;locus_tag=LU604_RS25625;product=DUF935 family protein;protein_id=WP_233479573.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4837561 4838892 . + . ID=gene-LU604_RS25630;Name=LU604_RS25630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25630;old_locus_tag=LU604_25630 NZ_CP089942.1 Protein Homology CDS 4837561 4838892 . + 0 ID=cds-WP_233479574.1;Parent=gene-LU604_RS25630;Dbxref=Genbank:WP_233479574.1;Name=WP_233479574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046899.1;locus_tag=LU604_RS25630;product=phage minor head protein;protein_id=WP_233479574.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4838892 4838970 . - . ID=gene-LU604_RS25635;Name=LU604_RS25635;gbkey=Gene;gene_biotype=tRNA;locus_tag=LU604_RS25635;old_locus_tag=LU604_25635 NZ_CP089942.1 tRNAscan-SE tRNA 4838892 4838970 . - . ID=rna-LU604_RS25635;Parent=gene-LU604_RS25635;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS25635;product=tRNA-OTHER NZ_CP089942.1 tRNAscan-SE exon 4838892 4838970 . - . ID=exon-LU604_RS25635-1;Parent=rna-LU604_RS25635;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LU604_RS25635;product=tRNA-OTHER NZ_CP089942.1 RefSeq gene 4839012 4839470 . + . ID=gene-LU604_RS25640;Name=LU604_RS25640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25640;old_locus_tag=LU604_25640 NZ_CP089942.1 Protein Homology CDS 4839012 4839470 . + 0 ID=cds-WP_233479575.1;Parent=gene-LU604_RS25640;Dbxref=Genbank:WP_233479575.1;Name=WP_233479575.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536783.1;locus_tag=LU604_RS25640;product=phage virion morphogenesis protein;protein_id=WP_233479575.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4839670 4840785 . + . ID=gene-LU604_RS25645;Name=LU604_RS25645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25645;old_locus_tag=LU604_25645 NZ_CP089942.1 Protein Homology CDS 4839670 4840785 . + 0 ID=cds-WP_233481448.1;Parent=gene-LU604_RS25645;Dbxref=Genbank:WP_233481448.1;Name=WP_233481448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536780.1;locus_tag=LU604_RS25645;product=protease;protein_id=WP_233481448.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4840782 4841702 . + . ID=gene-LU604_RS25650;Name=LU604_RS25650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25650;old_locus_tag=LU604_25650 NZ_CP089942.1 Protein Homology CDS 4840782 4841702 . + 0 ID=cds-WP_233479577.1;Parent=gene-LU604_RS25650;Dbxref=Genbank:WP_233479577.1;Name=WP_233479577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000637410.1;locus_tag=LU604_RS25650;product=Mu-like prophage major head subunit gpT family protein;protein_id=WP_233479577.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4841773 4842246 . + . ID=gene-LU604_RS25655;Name=LU604_RS25655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25655;old_locus_tag=LU604_25655 NZ_CP089942.1 Protein Homology CDS 4841773 4842246 . + 0 ID=cds-WP_233479578.1;Parent=gene-LU604_RS25655;Dbxref=Genbank:WP_233479578.1;Name=WP_233479578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000017157.1;locus_tag=LU604_RS25655;product=HI1506-related protein;protein_id=WP_233479578.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4842246 4842668 . + . ID=gene-LU604_RS25660;Name=LU604_RS25660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25660;old_locus_tag=LU604_25660 NZ_CP089942.1 Protein Homology CDS 4842246 4842668 . + 0 ID=cds-WP_233479579.1;Parent=gene-LU604_RS25660;Dbxref=Genbank:WP_233479579.1;Name=WP_233479579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001104973.1;locus_tag=LU604_RS25660;product=DUF1320 family protein;protein_id=WP_233479579.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4842668 4843201 . + . ID=gene-LU604_RS25665;Name=LU604_RS25665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25665;old_locus_tag=LU604_25665 NZ_CP089942.1 Protein Homology CDS 4842668 4843201 . + 0 ID=cds-WP_233479580.1;Parent=gene-LU604_RS25665;Dbxref=Genbank:WP_233479580.1;Name=WP_233479580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000888929.1;locus_tag=LU604_RS25665;product=DUF1834 family protein;protein_id=WP_233479580.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4843198 4843449 . + . ID=gene-LU604_RS25670;Name=LU604_RS25670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25670;old_locus_tag=LU604_25670 NZ_CP089942.1 Protein Homology CDS 4843198 4843449 . + 0 ID=cds-WP_104446539.1;Parent=gene-LU604_RS25670;Dbxref=Genbank:WP_104446539.1;Name=WP_104446539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001471503.1;locus_tag=LU604_RS25670;product=DUF2635 domain-containing protein;protein_id=WP_104446539.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4843446 4844960 . + . ID=gene-LU604_RS25675;Name=LU604_RS25675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25675;old_locus_tag=LU604_25675 NZ_CP089942.1 Protein Homology CDS 4843446 4844960 . + 0 ID=cds-WP_233479581.1;Parent=gene-LU604_RS25675;Dbxref=Genbank:WP_233479581.1;Name=WP_233479581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280310.1;locus_tag=LU604_RS25675;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_233479581.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4844970 4845326 . + . ID=gene-LU604_RS25680;Name=LU604_RS25680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25680;old_locus_tag=LU604_25680 NZ_CP089942.1 Protein Homology CDS 4844970 4845326 . + 0 ID=cds-WP_104446537.1;Parent=gene-LU604_RS25680;Dbxref=Genbank:WP_104446537.1;Name=WP_104446537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000918404.1;locus_tag=LU604_RS25680;product=phage tail tube protein;protein_id=WP_104446537.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4845336 4845791 . + . ID=gene-LU604_RS25685;Name=LU604_RS25685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25685;old_locus_tag=LU604_25685 NZ_CP089942.1 Protein Homology CDS 4845336 4845791 . + 0 ID=cds-WP_233479582.1;Parent=gene-LU604_RS25685;Dbxref=Genbank:WP_233479582.1;Name=WP_233479582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213222.1;locus_tag=LU604_RS25685;product=phage tail assembly protein;protein_id=WP_233479582.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4845921 4847756 . + . ID=gene-LU604_RS25690;Name=LU604_RS25690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25690;old_locus_tag=LU604_25690 NZ_CP089942.1 Protein Homology CDS 4845921 4847756 . + 0 ID=cds-WP_233479583.1;Parent=gene-LU604_RS25690;Dbxref=Genbank:WP_233479583.1;Name=WP_233479583.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040129.1;locus_tag=LU604_RS25690;product=tape measure protein;protein_id=WP_233479583.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4847792 4848343 . + . ID=gene-LU604_RS25695;Name=LU604_RS25695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25695;old_locus_tag=LU604_25695 NZ_CP089942.1 Protein Homology CDS 4847792 4848343 . + 0 ID=cds-WP_233480886.1;Parent=gene-LU604_RS25695;Dbxref=Genbank:WP_233480886.1;Name=WP_233480886.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001344236.1;locus_tag=LU604_RS25695;product=phage baseplate assembly protein V;protein_id=WP_233480886.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4848340 4848777 . + . ID=gene-LU604_RS25700;Name=LU604_RS25700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25700;old_locus_tag=LU604_25700 NZ_CP089942.1 Protein Homology CDS 4848340 4848777 . + 0 ID=cds-WP_233479584.1;Parent=gene-LU604_RS25700;Dbxref=Genbank:WP_233479584.1;Name=WP_233479584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001557023.1;locus_tag=LU604_RS25700;product=phage GP46 family protein;protein_id=WP_233479584.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4848779 4849861 . + . ID=gene-LU604_RS25705;Name=LU604_RS25705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25705;old_locus_tag=LU604_25705 NZ_CP089942.1 Protein Homology CDS 4848779 4849861 . + 0 ID=cds-WP_233479585.1;Parent=gene-LU604_RS25705;Dbxref=Genbank:WP_233479585.1;Name=WP_233479585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331812.1;locus_tag=LU604_RS25705;product=baseplate J/gp47 family protein;protein_id=WP_233479585.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4849858 4850436 . + . ID=gene-LU604_RS25710;Name=LU604_RS25710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25710;old_locus_tag=LU604_25710 NZ_CP089942.1 Protein Homology CDS 4849858 4850436 . + 0 ID=cds-WP_233479586.1;Parent=gene-LU604_RS25710;Dbxref=Genbank:WP_233479586.1;Name=WP_233479586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301582.1;locus_tag=LU604_RS25710;product=DUF2313 domain-containing protein;protein_id=WP_233479586.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4850449 4851282 . + . ID=gene-LU604_RS25715;Name=LU604_RS25715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25715;old_locus_tag=LU604_25715 NZ_CP089942.1 Protein Homology CDS 4850449 4851282 . + 0 ID=cds-WP_233479587.1;Parent=gene-LU604_RS25715;Dbxref=Genbank:WP_233479587.1;Name=WP_233479587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016191670.1;locus_tag=LU604_RS25715;product=tail fiber protein;protein_id=WP_233479587.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4851282 4851887 . + . ID=gene-LU604_RS25720;Name=LU604_RS25720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25720;old_locus_tag=LU604_25720 NZ_CP089942.1 Protein Homology CDS 4851282 4851887 . + 0 ID=cds-WP_233479588.1;Parent=gene-LU604_RS25720;Dbxref=Genbank:WP_233479588.1;Name=WP_233479588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013027010.1;locus_tag=LU604_RS25720;product=tail fiber assembly protein;protein_id=WP_233479588.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4852189 4853229 . + . ID=gene-LU604_RS25725;Name=LU604_RS25725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25725;old_locus_tag=LU604_25725 NZ_CP089942.1 Protein Homology CDS 4852189 4853229 . + 0 ID=cds-WP_233478553.1-30;Parent=gene-LU604_RS25725;Dbxref=Genbank:WP_233478553.1;Name=WP_233478553.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS25725;product=IS481 family transposase;protein_id=WP_233478553.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4853269 4853775 . - . ID=gene-LU604_RS25730;Name=LU604_RS25730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25730;old_locus_tag=LU604_25730 NZ_CP089942.1 GeneMarkS-2+ CDS 4853269 4853775 . - 0 ID=cds-WP_233479589.1;Parent=gene-LU604_RS25730;Dbxref=Genbank:WP_233479589.1;Name=WP_233479589.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25730;product=tail fiber assembly protein;protein_id=WP_233479589.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4853775 4854167 . - . ID=gene-LU604_RS25735;Name=LU604_RS25735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25735;old_locus_tag=LU604_25735 NZ_CP089942.1 Protein Homology CDS 4853775 4854167 . - 0 ID=cds-WP_233479590.1;Parent=gene-LU604_RS25735;Dbxref=Genbank:WP_233479590.1;Name=WP_233479590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001298743.1;locus_tag=LU604_RS25735;product=phage tail protein;protein_id=WP_233479590.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4854317 4854895 . + . ID=gene-LU604_RS25740;Name=LU604_RS25740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25740;old_locus_tag=LU604_25740 NZ_CP089942.1 Protein Homology CDS 4854317 4854895 . + 0 ID=cds-WP_233479591.1;Parent=gene-LU604_RS25740;Dbxref=Genbank:WP_233479591.1;Name=WP_233479591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016152555.1;locus_tag=LU604_RS25740;product=recombinase family protein;protein_id=WP_233479591.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4855003 4855152 . + . ID=gene-LU604_RS25745;Name=LU604_RS25745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25745;old_locus_tag=LU604_25745 NZ_CP089942.1 Protein Homology CDS 4855003 4855152 . + 0 ID=cds-WP_233481650.1;Parent=gene-LU604_RS25745;Dbxref=Genbank:WP_233481650.1;Name=WP_233481650.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018986.2;locus_tag=LU604_RS25745;product=DUF1471 domain-containing protein;protein_id=WP_233481650.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4855321 4855996 . + . ID=gene-LU604_RS25750;Name=LU604_RS25750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS25750;old_locus_tag=LU604_25750;pseudo=true NZ_CP089942.1 Protein Homology CDS 4855321 4855996 . + 0 ID=cds-LU604_RS25750;Parent=gene-LU604_RS25750;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047389784.1;locus_tag=LU604_RS25750;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4856516 4857022 . + . ID=gene-LU604_RS25755;Name=LU604_RS25755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25755;old_locus_tag=LU604_25755 NZ_CP089942.1 Protein Homology CDS 4856516 4857022 . + 0 ID=cds-WP_233479593.1;Parent=gene-LU604_RS25755;Dbxref=Genbank:WP_233479593.1;Name=WP_233479593.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022800.2;locus_tag=LU604_RS25755;product=hypothetical protein;protein_id=WP_233479593.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4857204 4859252 . + . ID=gene-LU604_RS25760;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=LU604_RS25760;old_locus_tag=LU604_25760 NZ_CP089942.1 Protein Homology CDS 4857204 4859252 . + 0 ID=cds-WP_233481449.1;Parent=gene-LU604_RS25760;Dbxref=Genbank:WP_233481449.1;Name=WP_233481449.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122112.1;locus_tag=LU604_RS25760;product=type II secretion system secretin GspD;protein_id=WP_233481449.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4859252 4860733 . + . ID=gene-LU604_RS25765;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=LU604_RS25765;old_locus_tag=LU604_25765 NZ_CP089942.1 Protein Homology CDS 4859252 4860733 . + 0 ID=cds-WP_233479595.1;Parent=gene-LU604_RS25765;Dbxref=Genbank:WP_233479595.1;Name=WP_233479595.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192398.1;locus_tag=LU604_RS25765;product=type II secretion system ATPase GspE;protein_id=WP_233479595.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4860723 4861922 . + . ID=gene-LU604_RS25770;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=LU604_RS25770;old_locus_tag=LU604_25770 NZ_CP089942.1 Protein Homology CDS 4860723 4861922 . + 0 ID=cds-WP_233479596.1;Parent=gene-LU604_RS25770;Dbxref=Genbank:WP_233479596.1;Name=WP_233479596.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122114.1;locus_tag=LU604_RS25770;product=type II secretion system inner membrane protein GspF;protein_id=WP_233479596.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4861945 4862388 . + . ID=gene-LU604_RS25775;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=LU604_RS25775;old_locus_tag=LU604_25775 NZ_CP089942.1 Protein Homology CDS 4861945 4862388 . + 0 ID=cds-WP_233479597.1;Parent=gene-LU604_RS25775;Dbxref=Genbank:WP_233479597.1;Name=WP_233479597.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192396.1;locus_tag=LU604_RS25775;product=type II secretion system major pseudopilin GspG;protein_id=WP_233479597.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4862390 4862785 . + . ID=gene-LU604_RS25780;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=LU604_RS25780;old_locus_tag=LU604_25780 NZ_CP089942.1 Protein Homology CDS 4862390 4862785 . + 0 ID=cds-WP_233479598.1;Parent=gene-LU604_RS25780;Dbxref=Genbank:WP_233479598.1;Name=WP_233479598.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192395.1;locus_tag=LU604_RS25780;product=type II secretion system minor pseudopilin GspI;protein_id=WP_233479598.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4862782 4863333 . + . ID=gene-LU604_RS25785;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=LU604_RS25785;old_locus_tag=LU604_25785 NZ_CP089942.1 Protein Homology CDS 4862782 4863333 . + 0 ID=cds-WP_016192394.1;Parent=gene-LU604_RS25785;Dbxref=Genbank:WP_016192394.1;Name=WP_016192394.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspJ;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122117.1;locus_tag=LU604_RS25785;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_016192394.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4863333 4864232 . + . ID=gene-LU604_RS25790;Name=LU604_RS25790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25790;old_locus_tag=LU604_25790 NZ_CP089942.1 Protein Homology CDS 4863333 4864232 . + 0 ID=cds-WP_233479599.1;Parent=gene-LU604_RS25790;Dbxref=Genbank:WP_233479599.1;Name=WP_233479599.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192393.1;locus_tag=LU604_RS25790;product=type II secretion system protein GspK;protein_id=WP_233479599.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4864229 4865428 . + . ID=gene-LU604_RS25795;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=LU604_RS25795;old_locus_tag=LU604_25795 NZ_CP089942.1 Protein Homology CDS 4864229 4865428 . + 0 ID=cds-WP_233479600.1;Parent=gene-LU604_RS25795;Dbxref=Genbank:WP_233479600.1;Name=WP_233479600.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspL;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192392.1;locus_tag=LU604_RS25795;product=type II secretion system protein GspL;protein_id=WP_233479600.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4865418 4865864 . + . ID=gene-LU604_RS25800;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=LU604_RS25800;old_locus_tag=LU604_25800 NZ_CP089942.1 Protein Homology CDS 4865418 4865864 . + 0 ID=cds-WP_016192391.1;Parent=gene-LU604_RS25800;Dbxref=Genbank:WP_016192391.1;Name=WP_016192391.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspM;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122122.1;locus_tag=LU604_RS25800;product=type II secretion system protein GspM;protein_id=WP_016192391.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4865865 4866635 . + . ID=gene-LU604_RS25805;Name=LU604_RS25805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25805;old_locus_tag=LU604_25805 NZ_CP089942.1 Protein Homology CDS 4865865 4866635 . + 0 ID=cds-WP_016192390.1;Parent=gene-LU604_RS25805;Dbxref=Genbank:WP_016192390.1;Name=WP_016192390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005173855.1;locus_tag=LU604_RS25805;product=A24 family peptidase;protein_id=WP_016192390.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4866762 4867064 . + . ID=gene-LU604_RS25810;Name=gspS;gbkey=Gene;gene=gspS;gene_biotype=protein_coding;locus_tag=LU604_RS25810;old_locus_tag=LU604_25810 NZ_CP089942.1 Protein Homology CDS 4866762 4867064 . + 0 ID=cds-WP_233480887.1;Parent=gene-LU604_RS25810;Dbxref=Genbank:WP_233480887.1;Name=WP_233480887.1;gbkey=CDS;gene=gspS;inference=COORDINATES: protein motif:HMM:TIGR01004.2;locus_tag=LU604_RS25810;product=type II secretion system pilot lipoprotein GspS;protein_id=WP_233480887.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4867073 4867326 . + . ID=gene-LU604_RS25815;Name=LU604_RS25815;end_range=4867326,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS25815;old_locus_tag=LU604_25815;partial=true;pseudo=true;start_range=.,4867073 NZ_CP089942.1 Protein Homology CDS 4867073 4867326 . + 0 ID=cds-LU604_RS25815;Parent=gene-LU604_RS25815;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4867326,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611198.1;locus_tag=LU604_RS25815;partial=true;product=transposase;pseudo=true;start_range=.,4867073;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4867508 4868030 . + . ID=gene-LU604_RS25820;Name=LU604_RS25820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS25820;old_locus_tag=LU604_25820;pseudo=true NZ_CP089942.1 Protein Homology CDS 4867508 4868030 . + 0 ID=cds-LU604_RS25820;Parent=gene-LU604_RS25820;Note=frameshifted;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000470624.1;locus_tag=LU604_RS25820;product=recombinase family protein;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4868493 4869190 . + . ID=gene-LU604_RS25825;Name=LU604_RS25825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25825;old_locus_tag=LU604_25825 NZ_CP089942.1 Protein Homology CDS 4868493 4868742 . + 0 ID=cds-WP_233479601.1;Parent=gene-LU604_RS25825;Dbxref=Genbank:WP_233479601.1;Name=WP_233479601.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS25825;product=IS1 family transposase;protein_id=WP_233479601.1;transl_table=11 NZ_CP089942.1 Protein Homology CDS 4868742 4869190 . + 2 ID=cds-WP_233479601.1;Parent=gene-LU604_RS25825;Dbxref=Genbank:WP_233479601.1;Name=WP_233479601.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=LU604_RS25825;product=IS1 family transposase;protein_id=WP_233479601.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4869654 4871018 . - . ID=gene-LU604_RS25830;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=LU604_RS25830;old_locus_tag=LU604_25830 NZ_CP089942.1 Protein Homology CDS 4869654 4871018 . - 0 ID=cds-WP_233479602.1;Parent=gene-LU604_RS25830;Dbxref=Genbank:WP_233479602.1;Name=WP_233479602.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=LU604_RS25830;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_233479602.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4871100 4872743 . - . ID=gene-LU604_RS25835;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=LU604_RS25835;old_locus_tag=LU604_25835 NZ_CP089942.1 Protein Homology CDS 4871100 4872743 . - 0 ID=cds-WP_233479603.1;Parent=gene-LU604_RS25835;Dbxref=Genbank:WP_233479603.1;Name=WP_233479603.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849663.1;locus_tag=LU604_RS25835;product=membrane protein insertase YidC;protein_id=WP_233479603.1;transl_table=11 NZ_CP089942.1 RefSeq pseudogene 4872746 4873004 . - . ID=gene-LU604_RS25840;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=pseudogene;locus_tag=LU604_RS25840;old_locus_tag=LU604_25840;pseudo=true NZ_CP089942.1 Protein Homology CDS 4872746 4873004 . - 0 ID=cds-LU604_RS25840;Parent=gene-LU604_RS25840;Note=frameshifted;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=LU604_RS25840;product=membrane protein insertion efficiency factor YidD;pseudo=true;transl_table=11 NZ_CP089942.1 RefSeq gene 4872968 4873327 . - . ID=gene-LU604_RS25845;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=LU604_RS25845;old_locus_tag=LU604_25845 NZ_CP089942.1 Protein Homology CDS 4872968 4873327 . - 0 ID=cds-WP_016192422.1;Parent=gene-LU604_RS25845;Dbxref=Genbank:WP_016192422.1;Name=WP_016192422.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=LU604_RS25845;product=ribonuclease P protein component;protein_id=WP_016192422.1;transl_table=11 NZ_CP089942.1 RefSeq gene 4873345 4873485 . - . ID=gene-LU604_RS25850;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=LU604_RS25850;old_locus_tag=LU604_25850 NZ_CP089942.1 Protein Homology CDS 4873345 4873485 . - 0 ID=cds-WP_000831330.1;Parent=gene-LU604_RS25850;Dbxref=Genbank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=LU604_RS25850;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 ##sequence-region NZ_CP089943.1 1 71258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=65700 NZ_CP089943.1 RefSeq region 1 71258 . + . ID=NZ_CP089943.1:1..71258;Dbxref=taxon:65700;Is_circular=true;Name=pETR001-a;collection-date=2010;country=USA: Maryland;gbkey=Src;genome=plasmid;isolation-source=Infected agricultural plant;mol_type=genomic DNA;nat-host=Cucumis sativus;plasmid-name=pETR001-a;strain=MDCuke NZ_CP089943.1 RefSeq gene 214 3603 . + . ID=gene-LU604_RS25860;Name=LU604_RS25860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25860;old_locus_tag=LU604_25860 NZ_CP089943.1 Protein Homology CDS 214 3603 . + 0 ID=cds-WP_233481656.1;Parent=gene-LU604_RS25860;Dbxref=Genbank:WP_233481656.1;Name=WP_233481656.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037421.2;locus_tag=LU604_RS25860;product=DUF5710 domain-containing protein;protein_id=WP_233481656.1;transl_table=11 NZ_CP089943.1 RefSeq gene 3611 4054 . + . ID=gene-LU604_RS25865;Name=LU604_RS25865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25865;old_locus_tag=LU604_25865 NZ_CP089943.1 GeneMarkS-2+ CDS 3611 4054 . + 0 ID=cds-WP_233480935.1;Parent=gene-LU604_RS25865;Dbxref=Genbank:WP_233480935.1;Name=WP_233480935.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25865;product=hypothetical protein;protein_id=WP_233480935.1;transl_table=11 NZ_CP089943.1 RefSeq gene 4155 4775 . + . ID=gene-LU604_RS25870;Name=LU604_RS25870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25870;old_locus_tag=LU604_25870 NZ_CP089943.1 Protein Homology CDS 4155 4775 . + 0 ID=cds-WP_233480936.1;Parent=gene-LU604_RS25870;Dbxref=Genbank:WP_233480936.1;Name=WP_233480936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720818.1;locus_tag=LU604_RS25870;product=DotI/IcmL/TraM family protein;protein_id=WP_233480936.1;transl_table=11 NZ_CP089943.1 RefSeq gene 4791 5798 . + . ID=gene-LU604_RS25875;Name=LU604_RS25875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25875;old_locus_tag=LU604_25875 NZ_CP089943.1 Protein Homology CDS 4791 5798 . + 0 ID=cds-WP_233481657.1;Parent=gene-LU604_RS25875;Dbxref=Genbank:WP_233481657.1;Name=WP_233481657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001165562.1;locus_tag=LU604_RS25875;product=DotH/IcmK family type IV secretion protein;protein_id=WP_233481657.1;transl_table=11 NZ_CP089943.1 RefSeq gene 5801 7060 . + . ID=gene-LU604_RS25880;Name=traO;gbkey=Gene;gene=traO;gene_biotype=protein_coding;locus_tag=LU604_RS25880;old_locus_tag=LU604_25880 NZ_CP089943.1 Protein Homology CDS 5801 7060 . + 0 ID=cds-WP_233480938.1;Parent=gene-LU604_RS25880;Dbxref=Genbank:WP_233480938.1;Name=WP_233480938.1;gbkey=CDS;gene=traO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720823.1;locus_tag=LU604_RS25880;product=conjugal transfer protein TraO;protein_id=WP_233480938.1;transl_table=11 NZ_CP089943.1 RefSeq gene 7072 7866 . + . ID=gene-LU604_RS25885;Name=LU604_RS25885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25885;old_locus_tag=LU604_25885 NZ_CP089943.1 GeneMarkS-2+ CDS 7072 7866 . + 0 ID=cds-WP_233480939.1;Parent=gene-LU604_RS25885;Dbxref=Genbank:WP_233480939.1;Name=WP_233480939.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25885;product=hypothetical protein;protein_id=WP_233480939.1;transl_table=11 NZ_CP089943.1 RefSeq gene 7866 8393 . + . ID=gene-LU604_RS25890;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=LU604_RS25890;old_locus_tag=LU604_25890 NZ_CP089943.1 Protein Homology CDS 7866 8393 . + 0 ID=cds-WP_233480940.1;Parent=gene-LU604_RS25890;Dbxref=Genbank:WP_233480940.1;Name=WP_233480940.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374622.1;locus_tag=LU604_RS25890;product=conjugal transfer protein TraQ;protein_id=WP_233480940.1;transl_table=11 NZ_CP089943.1 RefSeq gene 8420 8803 . + . ID=gene-LU604_RS25895;Name=LU604_RS25895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25895;old_locus_tag=LU604_25895 NZ_CP089943.1 Protein Homology CDS 8420 8803 . + 0 ID=cds-WP_233480941.1;Parent=gene-LU604_RS25895;Dbxref=Genbank:WP_233480941.1;Name=WP_233480941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720828.1;locus_tag=LU604_RS25895;product=hypothetical protein;protein_id=WP_233480941.1;transl_table=11 NZ_CP089943.1 RefSeq gene 8855 9808 . + . ID=gene-LU604_RS25900;Name=LU604_RS25900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25900;old_locus_tag=LU604_25900 NZ_CP089943.1 GeneMarkS-2+ CDS 8855 9808 . + 0 ID=cds-WP_233480942.1;Parent=gene-LU604_RS25900;Dbxref=Genbank:WP_233480942.1;Name=WP_233480942.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25900;product=hypothetical protein;protein_id=WP_233480942.1;transl_table=11 NZ_CP089943.1 RefSeq gene 9832 12909 . + . ID=gene-LU604_RS25905;Name=LU604_RS25905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25905;old_locus_tag=LU604_25905 NZ_CP089943.1 Protein Homology CDS 9832 12909 . + 0 ID=cds-WP_233480943.1;Parent=gene-LU604_RS25905;Dbxref=Genbank:WP_233480943.1;Name=WP_233480943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374619.1;locus_tag=LU604_RS25905;product=ATP-binding protein;protein_id=WP_233480943.1;transl_table=11 NZ_CP089943.1 RefSeq gene 12924 14120 . + . ID=gene-LU604_RS25910;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=LU604_RS25910;old_locus_tag=LU604_25910 NZ_CP089943.1 Protein Homology CDS 12924 14120 . + 0 ID=cds-WP_233480944.1;Parent=gene-LU604_RS25910;Dbxref=Genbank:WP_233480944.1;Name=WP_233480944.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720831.1;locus_tag=LU604_RS25910;product=conjugal transfer protein TraW;protein_id=WP_233480944.1;transl_table=11 NZ_CP089943.1 RefSeq gene 14117 14629 . + . ID=gene-LU604_RS25915;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=LU604_RS25915;old_locus_tag=LU604_25915 NZ_CP089943.1 Protein Homology CDS 14117 14629 . + 0 ID=cds-WP_233480945.1;Parent=gene-LU604_RS25915;Dbxref=Genbank:WP_233480945.1;Name=WP_233480945.1;gbkey=CDS;gene=traX;inference=COORDINATES: protein motif:HMM:NF033887.1;locus_tag=LU604_RS25915;product=conjugal transfer protein TraX;protein_id=WP_233480945.1;transl_table=11 NZ_CP089943.1 RefSeq gene 14654 16825 . + . ID=gene-LU604_RS25920;Name=LU604_RS25920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25920;old_locus_tag=LU604_25920 NZ_CP089943.1 Protein Homology CDS 14654 16825 . + 0 ID=cds-WP_233480946.1;Parent=gene-LU604_RS25920;Dbxref=Genbank:WP_233480946.1;Name=WP_233480946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720832.1;locus_tag=LU604_RS25920;product=DotA/TraY family protein;protein_id=WP_233480946.1;transl_table=11 NZ_CP089943.1 RefSeq gene 16915 17166 . + . ID=gene-LU604_RS25925;Name=LU604_RS25925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25925;old_locus_tag=LU604_25925 NZ_CP089943.1 Protein Homology CDS 16915 17166 . + 0 ID=cds-WP_233480947.1;Parent=gene-LU604_RS25925;Dbxref=Genbank:WP_233480947.1;Name=WP_233480947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001595120.1;locus_tag=LU604_RS25925;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_233480947.1;transl_table=11 NZ_CP089943.1 RefSeq gene 17163 17450 . + . ID=gene-LU604_RS25930;Name=LU604_RS25930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25930;old_locus_tag=LU604_25930 NZ_CP089943.1 Protein Homology CDS 17163 17450 . + 0 ID=cds-WP_233480948.1;Parent=gene-LU604_RS25930;Dbxref=Genbank:WP_233480948.1;Name=WP_233480948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317119.1;locus_tag=LU604_RS25930;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_233480948.1;transl_table=11 NZ_CP089943.1 RefSeq gene 17467 18147 . + . ID=gene-LU604_RS25935;Name=excA;gbkey=Gene;gene=excA;gene_biotype=protein_coding;locus_tag=LU604_RS25935;old_locus_tag=LU604_25935 NZ_CP089943.1 Protein Homology CDS 17467 18147 . + 0 ID=cds-WP_233480949.1;Parent=gene-LU604_RS25935;Dbxref=Genbank:WP_233480949.1;Name=WP_233480949.1;gbkey=CDS;gene=excA;inference=COORDINATES: protein motif:HMM:NF033891.1;locus_tag=LU604_RS25935;product=plasmid IncI1-type surface exclusion protein ExcA;protein_id=WP_233480949.1;transl_table=11 NZ_CP089943.1 RefSeq gene 18233 19504 . + . ID=gene-LU604_RS25940;Name=LU604_RS25940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25940;old_locus_tag=LU604_25940 NZ_CP089943.1 Protein Homology CDS 18233 19504 . + 0 ID=cds-WP_233480950.1;Parent=gene-LU604_RS25940;Dbxref=Genbank:WP_233480950.1;Name=WP_233480950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720838.1;locus_tag=LU604_RS25940;product=conjugal transfer protein TrbA;protein_id=WP_233480950.1;transl_table=11 NZ_CP089943.1 RefSeq gene 19509 20573 . + . ID=gene-LU604_RS25945;Name=LU604_RS25945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25945;old_locus_tag=LU604_25945 NZ_CP089943.1 Protein Homology CDS 19509 20573 . + 0 ID=cds-WP_233480951.1;Parent=gene-LU604_RS25945;Dbxref=Genbank:WP_233480951.1;Name=WP_233480951.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024498.2;locus_tag=LU604_RS25945;product=thioredoxin fold domain-containing protein;protein_id=WP_233480951.1;transl_table=11 NZ_CP089943.1 RefSeq gene 20584 22914 . + . ID=gene-LU604_RS25950;Name=LU604_RS25950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25950;old_locus_tag=LU604_25950 NZ_CP089943.1 Protein Homology CDS 20584 22914 . + 0 ID=cds-WP_233480952.1;Parent=gene-LU604_RS25950;Dbxref=Genbank:WP_233480952.1;Name=WP_233480952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720841.1;locus_tag=LU604_RS25950;product=conjugal transfer protein TrbC;protein_id=WP_233480952.1;transl_table=11 NZ_CP089943.1 RefSeq gene 22835 23356 . + . ID=gene-LU604_RS25955;Name=LU604_RS25955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25955;old_locus_tag=LU604_25955 NZ_CP089943.1 Protein Homology CDS 22835 23356 . + 0 ID=cds-WP_233481658.1;Parent=gene-LU604_RS25955;Dbxref=Genbank:WP_233481658.1;Name=WP_233481658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011070144.1;locus_tag=LU604_RS25955;product=phospholipase D family protein;protein_id=WP_233481658.1;transl_table=11 NZ_CP089943.1 RefSeq gene 23680 24204 . - . ID=gene-LU604_RS25960;Name=LU604_RS25960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25960;old_locus_tag=LU604_25960 NZ_CP089943.1 GeneMarkS-2+ CDS 23680 24204 . - 0 ID=cds-WP_233480954.1;Parent=gene-LU604_RS25960;Dbxref=Genbank:WP_233480954.1;Name=WP_233480954.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25960;product=hypothetical protein;protein_id=WP_233480954.1;transl_table=11 NZ_CP089943.1 RefSeq gene 24219 26150 . - . ID=gene-LU604_RS25965;Name=LU604_RS25965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25965;old_locus_tag=LU604_25965 NZ_CP089943.1 Protein Homology CDS 24219 26150 . - 0 ID=cds-WP_233480955.1;Parent=gene-LU604_RS25965;Dbxref=Genbank:WP_233480955.1;Name=WP_233480955.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015397.2;locus_tag=LU604_RS25965;product=relaxase/mobilization nuclease domain-containing protein;protein_id=WP_233480955.1;transl_table=11 NZ_CP089943.1 RefSeq gene 26152 26496 . - . ID=gene-LU604_RS25970;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=LU604_RS25970;old_locus_tag=LU604_25970 NZ_CP089943.1 Protein Homology CDS 26152 26496 . - 0 ID=cds-WP_233480956.1;Parent=gene-LU604_RS25970;Dbxref=Genbank:WP_233480956.1;Name=WP_233480956.1;Ontology_term=GO:0006355;gbkey=CDS;gene=mobA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720848.1;locus_tag=LU604_RS25970;product=plasmid mobilization protein MobA;protein_id=WP_233480956.1;transl_table=11 NZ_CP089943.1 RefSeq gene 26775 27086 . + . ID=gene-LU604_RS25975;Name=LU604_RS25975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25975;old_locus_tag=LU604_25975 NZ_CP089943.1 Protein Homology CDS 26775 27086 . + 0 ID=cds-WP_233480957.1;Parent=gene-LU604_RS25975;Dbxref=Genbank:WP_233480957.1;Name=WP_233480957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000130127.1;locus_tag=LU604_RS25975;product=molybdopterin-guanine dinucleotide biosynthesis protein MobC;protein_id=WP_233480957.1;transl_table=11 NZ_CP089943.1 RefSeq gene 27260 28093 . - . ID=gene-LU604_RS25980;Name=LU604_RS25980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25980;old_locus_tag=LU604_25980 NZ_CP089943.1 Protein Homology CDS 27260 28093 . - 0 ID=cds-WP_233480958.1;Parent=gene-LU604_RS25980;Dbxref=Genbank:WP_233480958.1;Name=WP_233480958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113358.1;locus_tag=LU604_RS25980;product=DUF932 domain-containing protein;protein_id=WP_233480958.1;transl_table=11 NZ_CP089943.1 RefSeq gene 28512 28778 . - . ID=gene-LU604_RS25985;Name=LU604_RS25985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25985;old_locus_tag=LU604_25985 NZ_CP089943.1 GeneMarkS-2+ CDS 28512 28778 . - 0 ID=cds-WP_233480959.1;Parent=gene-LU604_RS25985;Dbxref=Genbank:WP_233480959.1;Name=WP_233480959.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25985;product=hypothetical protein;protein_id=WP_233480959.1;transl_table=11 NZ_CP089943.1 RefSeq gene 28871 29311 . - . ID=gene-LU604_RS25990;Name=LU604_RS25990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25990;old_locus_tag=LU604_25990 NZ_CP089943.1 Protein Homology CDS 28871 29311 . - 0 ID=cds-WP_233480960.1;Parent=gene-LU604_RS25990;Dbxref=Genbank:WP_233480960.1;Name=WP_233480960.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018871.2;locus_tag=LU604_RS25990;product=DUF1419 domain-containing protein;protein_id=WP_233480960.1;transl_table=11 NZ_CP089943.1 RefSeq gene 29277 29435 . - . ID=gene-LU604_RS25995;Name=LU604_RS25995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS25995;old_locus_tag=LU604_25995 NZ_CP089943.1 GeneMarkS-2+ CDS 29277 29435 . - 0 ID=cds-WP_233480961.1;Parent=gene-LU604_RS25995;Dbxref=Genbank:WP_233480961.1;Name=WP_233480961.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS25995;product=hypothetical protein;protein_id=WP_233480961.1;transl_table=11 NZ_CP089943.1 RefSeq gene 29941 30180 . + . ID=gene-LU604_RS26000;Name=LU604_RS26000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26000;old_locus_tag=LU604_26000 NZ_CP089943.1 Protein Homology CDS 29941 30180 . + 0 ID=cds-WP_233480962.1;Parent=gene-LU604_RS26000;Dbxref=Genbank:WP_233480962.1;Name=WP_233480962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148351.1;locus_tag=LU604_RS26000;product=helix-turn-helix transcriptional regulator;protein_id=WP_233480962.1;transl_table=11 NZ_CP089943.1 RefSeq pseudogene 30742 30888 . - . ID=gene-LU604_RS26005;Name=LU604_RS26005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS26005;old_locus_tag=LU604_26005;partial=true;pseudo=true;start_range=.,30742 NZ_CP089943.1 Protein Homology CDS 30742 30888 . - 0 ID=cds-LU604_RS26005;Parent=gene-LU604_RS26005;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750277.1;locus_tag=LU604_RS26005;partial=true;product=hypothetical protein;pseudo=true;start_range=.,30742;transl_table=11 NZ_CP089943.1 RefSeq gene 30945 31523 . - . ID=gene-LU604_RS26010;Name=LU604_RS26010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26010;old_locus_tag=LU604_26010 NZ_CP089943.1 Protein Homology CDS 30945 31523 . - 0 ID=cds-WP_233480963.1;Parent=gene-LU604_RS26010;Dbxref=Genbank:WP_233480963.1;Name=WP_233480963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131746.1;locus_tag=LU604_RS26010;product=antirestriction protein;protein_id=WP_233480963.1;transl_table=11 NZ_CP089943.1 RefSeq gene 31941 32255 . - . ID=gene-LU604_RS26015;Name=LU604_RS26015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26015;old_locus_tag=LU604_26015 NZ_CP089943.1 Protein Homology CDS 31941 32255 . - 0 ID=cds-WP_233480964.1;Parent=gene-LU604_RS26015;Dbxref=Genbank:WP_233480964.1;Name=WP_233480964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166615.1;locus_tag=LU604_RS26015;product=type II toxin-antitoxin system MqsA family antitoxin;protein_id=WP_233480964.1;transl_table=11 NZ_CP089943.1 RefSeq gene 32248 32592 . - . ID=gene-LU604_RS26020;Name=LU604_RS26020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26020;old_locus_tag=LU604_26020 NZ_CP089943.1 Protein Homology CDS 32248 32592 . - 0 ID=cds-WP_233480965.1;Parent=gene-LU604_RS26020;Dbxref=Genbank:WP_233480965.1;Name=WP_233480965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271343.1;locus_tag=LU604_RS26020;product=toxin;protein_id=WP_233480965.1;transl_table=11 NZ_CP089943.1 RefSeq gene 32845 33147 . - . ID=gene-LU604_RS26025;Name=LU604_RS26025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26025;old_locus_tag=LU604_26025 NZ_CP089943.1 Protein Homology CDS 32845 33147 . - 0 ID=cds-WP_233480966.1;Parent=gene-LU604_RS26025;Dbxref=Genbank:WP_233480966.1;Name=WP_233480966.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: protein motif:HMM:NF017026.2;locus_tag=LU604_RS26025;product=methyltransferase;protein_id=WP_233480966.1;transl_table=11 NZ_CP089943.1 RefSeq pseudogene 33296 33559 . - . ID=gene-LU604_RS26030;Name=LU604_RS26030;end_range=33559,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS26030;old_locus_tag=LU604_26030;partial=true;pseudo=true;start_range=.,33296 NZ_CP089943.1 Protein Homology CDS 33296 33559 . - 0 ID=cds-LU604_RS26030;Parent=gene-LU604_RS26030;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=33559,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=LU604_RS26030;partial=true;product=transposase;pseudo=true;start_range=.,33296;transl_table=11 NZ_CP089943.1 RefSeq gene 33648 34580 . + . ID=gene-LU604_RS26035;Name=LU604_RS26035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26035;old_locus_tag=LU604_26035 NZ_CP089943.1 Protein Homology CDS 33648 34580 . + 0 ID=cds-WP_233481439.1-3;Parent=gene-LU604_RS26035;Dbxref=Genbank:WP_233481439.1;Name=WP_233481439.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU604_RS26035;product=IS91 family transposase;protein_id=WP_233481439.1;transl_table=11 NZ_CP089943.1 RefSeq gene 34537 34872 . + . ID=gene-LU604_RS27155;Name=LU604_RS27155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27155 NZ_CP089943.1 Protein Homology CDS 34537 34872 . + 0 ID=cds-WP_267938798.1;Parent=gene-LU604_RS27155;Dbxref=Genbank:WP_267938798.1;Name=WP_267938798.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS27155;product=hypothetical protein;protein_id=WP_267938798.1;transl_table=11 NZ_CP089943.1 RefSeq gene 35102 35980 . + . ID=gene-LU604_RS26040;Name=LU604_RS26040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26040;old_locus_tag=LU604_26040 NZ_CP089943.1 Protein Homology CDS 35102 35980 . + 0 ID=cds-WP_267938747.1-2;Parent=gene-LU604_RS26040;Dbxref=Genbank:WP_267938747.1;Name=WP_267938747.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU604_RS26040;product=IS91 family transposase;protein_id=WP_267938747.1;transl_table=11 NZ_CP089943.1 RefSeq gene 35992 36327 . + . ID=gene-LU604_RS27160;Name=LU604_RS27160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27160 NZ_CP089943.1 Protein Homology CDS 35992 36327 . + 0 ID=cds-WP_267938798.1-2;Parent=gene-LU604_RS27160;Dbxref=Genbank:WP_267938798.1;Name=WP_267938798.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS27160;product=hypothetical protein;protein_id=WP_267938798.1;transl_table=11 NZ_CP089943.1 RefSeq gene 36961 38229 . + . ID=gene-LU604_RS26045;Name=LU604_RS26045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26045;old_locus_tag=LU604_26045 NZ_CP089943.1 Protein Homology CDS 36961 38229 . + 0 ID=cds-WP_233480901.1;Parent=gene-LU604_RS26045;Dbxref=Genbank:WP_233480901.1;Name=WP_233480901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017786840.1;locus_tag=LU604_RS26045;product=aspartate aminotransferase family protein;protein_id=WP_233480901.1;transl_table=11 NZ_CP089943.1 RefSeq gene 38229 39302 . + . ID=gene-LU604_RS26050;Name=LU604_RS26050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26050;old_locus_tag=LU604_26050 NZ_CP089943.1 Protein Homology CDS 38229 39302 . + 0 ID=cds-WP_233480902.1;Parent=gene-LU604_RS26050;Dbxref=Genbank:WP_233480902.1;Name=WP_233480902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144860.1;locus_tag=LU604_RS26050;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_233480902.1;transl_table=11 NZ_CP089943.1 RefSeq gene 39299 39937 . + . ID=gene-LU604_RS26055;Name=LU604_RS26055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26055;old_locus_tag=LU604_26055 NZ_CP089943.1 Protein Homology CDS 39299 39937 . + 0 ID=cds-WP_233480903.1;Parent=gene-LU604_RS26055;Dbxref=Genbank:WP_233480903.1;Name=WP_233480903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017786842.1;locus_tag=LU604_RS26055;product=HAD family phosphatase;protein_id=WP_233480903.1;transl_table=11 NZ_CP089943.1 RefSeq gene 40000 41145 . + . ID=gene-LU604_RS26060;Name=LU604_RS26060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26060;old_locus_tag=LU604_26060 NZ_CP089943.1 Protein Homology CDS 40000 41145 . + 0 ID=cds-WP_233480904.1;Parent=gene-LU604_RS26060;Dbxref=Genbank:WP_233480904.1;Name=WP_233480904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170890.1;locus_tag=LU604_RS26060;product=MFS transporter;protein_id=WP_233480904.1;transl_table=11 NZ_CP089943.1 RefSeq gene 41194 41772 . + . ID=gene-LU604_RS26065;Name=LU604_RS26065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26065;old_locus_tag=LU604_26065 NZ_CP089943.1 Protein Homology CDS 41194 41772 . + 0 ID=cds-WP_233480905.1;Parent=gene-LU604_RS26065;Dbxref=Genbank:WP_233480905.1;Name=WP_233480905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017784124.1;locus_tag=LU604_RS26065;product=DUF1349 domain-containing protein;protein_id=WP_233480905.1;transl_table=11 NZ_CP089943.1 RefSeq pseudogene 41908 42078 . - . ID=gene-LU604_RS26070;Name=LU604_RS26070;end_range=42078,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS26070;old_locus_tag=LU604_26070;partial=true;pseudo=true NZ_CP089943.1 Protein Homology CDS 41908 42078 . - 0 ID=cds-LU604_RS26070;Parent=gene-LU604_RS26070;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=42078,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549957.1;locus_tag=LU604_RS26070;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP089943.1 RefSeq pseudogene 42273 42773 . - . ID=gene-LU604_RS26075;Name=LU604_RS26075;end_range=42773,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS26075;old_locus_tag=LU604_26075;partial=true;pseudo=true NZ_CP089943.1 Protein Homology CDS 42273 42773 . - 0 ID=cds-LU604_RS26075;Parent=gene-LU604_RS26075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=42773,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015724380.1;locus_tag=LU604_RS26075;partial=true;product=Tn3 family transposase;pseudo=true;transl_table=11 NZ_CP089943.1 RefSeq pseudogene 42777 42884 . + . ID=gene-LU604_RS26080;Name=LU604_RS26080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS26080;old_locus_tag=LU604_26080;partial=true;pseudo=true;start_range=.,42777 NZ_CP089943.1 Protein Homology CDS 42777 42884 . + 0 ID=cds-LU604_RS26080;Parent=gene-LU604_RS26080;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=LU604_RS26080;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,42777;transl_table=11 NZ_CP089943.1 RefSeq gene 43192 43818 . + . ID=gene-LU604_RS26085;Name=LU604_RS26085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26085;old_locus_tag=LU604_26085 NZ_CP089943.1 Protein Homology CDS 43192 43818 . + 0 ID=cds-WP_233480906.1;Parent=gene-LU604_RS26085;Dbxref=Genbank:WP_233480906.1;Name=WP_233480906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010260829.1;locus_tag=LU604_RS26085;product=ParA family plasmid-partitioning AAA ATPase;protein_id=WP_233480906.1;transl_table=11 NZ_CP089943.1 RefSeq gene 43815 44117 . + . ID=gene-LU604_RS26090;Name=LU604_RS26090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26090;old_locus_tag=LU604_26090 NZ_CP089943.1 Protein Homology CDS 43815 44117 . + 0 ID=cds-WP_233480907.1;Parent=gene-LU604_RS26090;Dbxref=Genbank:WP_233480907.1;Name=WP_233480907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001245884.1;locus_tag=LU604_RS26090;product=hypothetical protein;protein_id=WP_233480907.1;transl_table=11 NZ_CP089943.1 RefSeq gene 44215 44394 . - . ID=gene-LU604_RS26095;Name=LU604_RS26095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26095;old_locus_tag=LU604_26095 NZ_CP089943.1 Protein Homology CDS 44215 44394 . - 0 ID=cds-WP_233480908.1;Parent=gene-LU604_RS26095;Dbxref=Genbank:WP_233480908.1;Name=WP_233480908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006571901.1;locus_tag=LU604_RS26095;product=ribbon-helix-helix domain-containing protein;protein_id=WP_233480908.1;transl_table=11 NZ_CP089943.1 RefSeq gene 44585 45937 . - . ID=gene-LU604_RS26100;Name=LU604_RS26100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26100;old_locus_tag=LU604_26100 NZ_CP089943.1 Protein Homology CDS 44585 45937 . - 0 ID=cds-WP_267932947.1;Parent=gene-LU604_RS26100;Dbxref=Genbank:WP_267932947.1;Name=WP_267932947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014683018.1;locus_tag=LU604_RS26100;product=hypothetical protein;protein_id=WP_267932947.1;transl_table=11 NZ_CP089943.1 RefSeq gene 45946 46731 . - . ID=gene-LU604_RS26105;Name=LU604_RS26105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26105;old_locus_tag=LU604_26105 NZ_CP089943.1 Protein Homology CDS 45946 46731 . - 0 ID=cds-WP_233480910.1;Parent=gene-LU604_RS26105;Dbxref=Genbank:WP_233480910.1;Name=WP_233480910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197635.1;locus_tag=LU604_RS26105;product=site-specific integrase;protein_id=WP_233480910.1;transl_table=11 NZ_CP089943.1 RefSeq gene 46770 47381 . - . ID=gene-LU604_RS26110;Name=LU604_RS26110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26110;old_locus_tag=LU604_26110 NZ_CP089943.1 Protein Homology CDS 46770 47381 . - 0 ID=cds-WP_233480911.1;Parent=gene-LU604_RS26110;Dbxref=Genbank:WP_233480911.1;Name=WP_233480911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013199723.1;locus_tag=LU604_RS26110;product=hypothetical protein;protein_id=WP_233480911.1;transl_table=11 NZ_CP089943.1 RefSeq gene 47448 47756 . - . ID=gene-LU604_RS26115;Name=LU604_RS26115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26115;old_locus_tag=LU604_26115 NZ_CP089943.1 GeneMarkS-2+ CDS 47448 47756 . - 0 ID=cds-WP_233480912.1;Parent=gene-LU604_RS26115;Dbxref=Genbank:WP_233480912.1;Name=WP_233480912.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26115;product=DUF3426 domain-containing protein;protein_id=WP_233480912.1;transl_table=11 NZ_CP089943.1 RefSeq gene 49436 50659 . + . ID=gene-LU604_RS26120;Name=LU604_RS26120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26120;old_locus_tag=LU604_26120 NZ_CP089943.1 Protein Homology CDS 49436 50659 . + 0 ID=cds-WP_233478549.1-2;Parent=gene-LU604_RS26120;Dbxref=Genbank:WP_233478549.1;Name=WP_233478549.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004929550.1;locus_tag=LU604_RS26120;product=IS91 family transposase;protein_id=WP_233478549.1;transl_table=11 NZ_CP089943.1 RefSeq gene 50889 51767 . + . ID=gene-LU604_RS26125;Name=LU604_RS26125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26125;old_locus_tag=LU604_26125 NZ_CP089943.1 Protein Homology CDS 50889 51767 . + 0 ID=cds-WP_267938747.1-3;Parent=gene-LU604_RS26125;Dbxref=Genbank:WP_267938747.1;Name=WP_267938747.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033538.1;locus_tag=LU604_RS26125;product=IS91 family transposase;protein_id=WP_267938747.1;transl_table=11 NZ_CP089943.1 RefSeq gene 51779 52114 . + . ID=gene-LU604_RS27165;Name=LU604_RS27165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27165 NZ_CP089943.1 Protein Homology CDS 51779 52114 . + 0 ID=cds-WP_233481440.1-6;Parent=gene-LU604_RS27165;Dbxref=Genbank:WP_233481440.1;Name=WP_233481440.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016847.2;locus_tag=LU604_RS27165;product=hypothetical protein;protein_id=WP_233481440.1;transl_table=11 NZ_CP089943.1 RefSeq gene 52201 52971 . + . ID=gene-LU604_RS26130;Name=LU604_RS26130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26130;old_locus_tag=LU604_26130 NZ_CP089943.1 GeneMarkS-2+ CDS 52201 52971 . + 0 ID=cds-WP_233480913.1;Parent=gene-LU604_RS26130;Dbxref=Genbank:WP_233480913.1;Name=WP_233480913.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26130;product=hypothetical protein;protein_id=WP_233480913.1;transl_table=11 NZ_CP089943.1 RefSeq gene 53879 54781 . - . ID=gene-LU604_RS26135;Name=LU604_RS26135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26135;old_locus_tag=LU604_26135 NZ_CP089943.1 Protein Homology CDS 53879 54781 . - 0 ID=cds-WP_233480914.1;Parent=gene-LU604_RS26135;Dbxref=Genbank:WP_233480914.1;Name=WP_233480914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013199821.1;locus_tag=LU604_RS26135;product=Replication protein;protein_id=WP_233480914.1;transl_table=11 NZ_CP089943.1 RefSeq gene 56526 56984 . + . ID=gene-LU604_RS26140;Name=LU604_RS26140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26140;old_locus_tag=LU604_26140 NZ_CP089943.1 Protein Homology CDS 56526 56984 . + 0 ID=cds-WP_233480915.1;Parent=gene-LU604_RS26140;Dbxref=Genbank:WP_233480915.1;Name=WP_233480915.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014417.2;locus_tag=LU604_RS26140;product=antitermination protein NusG;protein_id=WP_233480915.1;transl_table=11 NZ_CP089943.1 RefSeq gene 57079 57327 . + . ID=gene-LU604_RS26145;Name=LU604_RS26145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26145;old_locus_tag=LU604_26145 NZ_CP089943.1 GeneMarkS-2+ CDS 57079 57327 . + 0 ID=cds-WP_233480916.1;Parent=gene-LU604_RS26145;Dbxref=Genbank:WP_233480916.1;Name=WP_233480916.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26145;product=hypothetical protein;protein_id=WP_233480916.1;transl_table=11 NZ_CP089943.1 RefSeq gene 57345 57545 . + . ID=gene-LU604_RS26150;Name=LU604_RS26150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26150;old_locus_tag=LU604_26150 NZ_CP089943.1 GeneMarkS-2+ CDS 57345 57545 . + 0 ID=cds-WP_233480917.1;Parent=gene-LU604_RS26150;Dbxref=Genbank:WP_233480917.1;Name=WP_233480917.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26150;product=hypothetical protein;protein_id=WP_233480917.1;transl_table=11 NZ_CP089943.1 RefSeq gene 57623 58630 . + . ID=gene-LU604_RS26155;Name=LU604_RS26155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26155;old_locus_tag=LU604_26155 NZ_CP089943.1 Protein Homology CDS 57623 58630 . + 0 ID=cds-WP_233481654.1;Parent=gene-LU604_RS26155;Dbxref=Genbank:WP_233481654.1;Name=WP_233481654.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022136.2;locus_tag=LU604_RS26155;product=toxin co-regulated pilus biosynthesis Q family protein;protein_id=WP_233481654.1;transl_table=11 NZ_CP089943.1 RefSeq gene 58630 59064 . + . ID=gene-LU604_RS26160;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=LU604_RS26160;old_locus_tag=LU604_26160 NZ_CP089943.1 Protein Homology CDS 58630 59064 . + 0 ID=cds-WP_233480919.1;Parent=gene-LU604_RS26160;Dbxref=Genbank:WP_233480919.1;Name=WP_233480919.1;gbkey=CDS;gene=pilM;inference=COORDINATES: protein motif:HMM:NF019064.2;locus_tag=LU604_RS26160;product=type IV pilus biogenesis protein PilM;protein_id=WP_233480919.1;transl_table=11 NZ_CP089943.1 RefSeq gene 59083 60714 . + . ID=gene-LU604_RS26165;Name=LU604_RS26165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26165;old_locus_tag=LU604_26165 NZ_CP089943.1 Protein Homology CDS 59083 60714 . + 0 ID=cds-WP_233481655.1;Parent=gene-LU604_RS26165;Dbxref=Genbank:WP_233481655.1;Name=WP_233481655.1;Ontology_term=GO:0009297,GO:0009306,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=pilus assembly|0009297||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015873775.1;locus_tag=LU604_RS26165;product=PilN family type IVB pilus formation outer membrane protein;protein_id=WP_233481655.1;transl_table=11 NZ_CP089943.1 RefSeq gene 60717 62012 . + . ID=gene-LU604_RS26170;Name=pilO2;gbkey=Gene;gene=pilO2;gene_biotype=protein_coding;locus_tag=LU604_RS26170;old_locus_tag=LU604_26170 NZ_CP089943.1 Protein Homology CDS 60717 62012 . + 0 ID=cds-WP_233480921.1;Parent=gene-LU604_RS26170;Dbxref=Genbank:WP_233480921.1;Name=WP_233480921.1;gbkey=CDS;gene=pilO2;inference=COORDINATES: protein motif:HMM:NF018562.2;locus_tag=LU604_RS26170;product=type 4b pilus protein PilO2;protein_id=WP_233480921.1;transl_table=11 NZ_CP089943.1 RefSeq gene 61999 62559 . + . ID=gene-LU604_RS26175;Name=pilP;gbkey=Gene;gene=pilP;gene_biotype=protein_coding;locus_tag=LU604_RS26175;old_locus_tag=LU604_26175 NZ_CP089943.1 Protein Homology CDS 61999 62559 . + 0 ID=cds-WP_233480922.1;Parent=gene-LU604_RS26175;Dbxref=Genbank:WP_233480922.1;Name=WP_233480922.1;Ontology_term=GO:0009297;gbkey=CDS;gene=pilP;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:TIGR03021.1;locus_tag=LU604_RS26175;product=type IV pilus biogenesis protein PilP;protein_id=WP_233480922.1;transl_table=11 NZ_CP089943.1 RefSeq gene 62567 64072 . + . ID=gene-LU604_RS26180;Name=LU604_RS26180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26180;old_locus_tag=LU604_26180 NZ_CP089943.1 Protein Homology CDS 62567 64072 . + 0 ID=cds-WP_233480923.1;Parent=gene-LU604_RS26180;Dbxref=Genbank:WP_233480923.1;Name=WP_233480923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011145412.1;locus_tag=LU604_RS26180;product=ATPase%2C T2SS/T4P/T4SS family;protein_id=WP_233480923.1;transl_table=11 NZ_CP089943.1 RefSeq gene 64069 65202 . + . ID=gene-LU604_RS26185;Name=LU604_RS26185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26185;old_locus_tag=LU604_26185 NZ_CP089943.1 Protein Homology CDS 64069 65202 . + 0 ID=cds-WP_233480924.1;Parent=gene-LU604_RS26185;Dbxref=Genbank:WP_233480924.1;Name=WP_233480924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374637.1;locus_tag=LU604_RS26185;product=type II secretion system F family protein;protein_id=WP_233480924.1;transl_table=11 NZ_CP089943.1 RefSeq gene 65263 65856 . + . ID=gene-LU604_RS26190;Name=LU604_RS26190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26190;old_locus_tag=LU604_26190 NZ_CP089943.1 Protein Homology CDS 65263 65856 . + 0 ID=cds-WP_233480925.1;Parent=gene-LU604_RS26190;Dbxref=Genbank:WP_233480925.1;Name=WP_233480925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708701.1;locus_tag=LU604_RS26190;product=type 4 pilus major pilin;protein_id=WP_233480925.1;transl_table=11 NZ_CP089943.1 RefSeq gene 65926 66402 . + . ID=gene-LU604_RS26195;Name=LU604_RS26195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26195;old_locus_tag=LU604_26195 NZ_CP089943.1 Protein Homology CDS 65926 66402 . + 0 ID=cds-WP_233480926.1;Parent=gene-LU604_RS26195;Dbxref=Genbank:WP_233480926.1;Name=WP_233480926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374635.1;locus_tag=LU604_RS26195;product=lytic transglycosylase domain-containing protein;protein_id=WP_233480926.1;transl_table=11 NZ_CP089943.1 RefSeq gene 66447 67064 . + . ID=gene-LU604_RS26200;Name=LU604_RS26200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26200;old_locus_tag=LU604_26200 NZ_CP089943.1 Protein Homology CDS 66447 67064 . + 0 ID=cds-WP_233480927.1;Parent=gene-LU604_RS26200;Dbxref=Genbank:WP_233480927.1;Name=WP_233480927.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: protein motif:HMM:NF013632.2;locus_tag=LU604_RS26200;product=prepilin peptidase;protein_id=WP_233480927.1;transl_table=11 NZ_CP089943.1 RefSeq gene 67070 68461 . + . ID=gene-LU604_RS26205;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=LU604_RS26205;old_locus_tag=LU604_26205 NZ_CP089943.1 Protein Homology CDS 67070 68461 . + 0 ID=cds-WP_233480928.1;Parent=gene-LU604_RS26205;Dbxref=Genbank:WP_233480928.1;Name=WP_233480928.1;gbkey=CDS;gene=pilV;inference=COORDINATES: protein motif:HMM:NF016785.2;locus_tag=LU604_RS26205;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=WP_233480928.1;transl_table=11 NZ_CP089943.1 RefSeq gene 68494 68697 . + . ID=gene-LU604_RS26210;Name=LU604_RS26210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26210;old_locus_tag=LU604_26210 NZ_CP089943.1 GeneMarkS-2+ CDS 68494 68697 . + 0 ID=cds-WP_233480929.1;Parent=gene-LU604_RS26210;Dbxref=Genbank:WP_233480929.1;Name=WP_233480929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26210;product=hypothetical protein;protein_id=WP_233480929.1;transl_table=11 NZ_CP089943.1 RefSeq gene 68808 69260 . + . ID=gene-LU604_RS26215;Name=LU604_RS26215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26215;old_locus_tag=LU604_26215 NZ_CP089943.1 Protein Homology CDS 68808 69260 . + 0 ID=cds-WP_233481659.1;Parent=gene-LU604_RS26215;Dbxref=Genbank:WP_233481659.1;Name=WP_233481659.1;Note=Members of this family include DotD of type IVB secretion systems and TraH of plasmid conjugative plasmid systems%2C both lipoproteins.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720812.1;locus_tag=LU604_RS26215;product=DotD/TraH family lipoprotein;protein_id=WP_233481659.1;transl_table=11 NZ_CP089943.1 RefSeq gene 69257 70045 . + . ID=gene-LU604_RS26220;Name=LU604_RS26220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26220;old_locus_tag=LU604_26220 NZ_CP089943.1 Protein Homology CDS 69257 70045 . + 0 ID=cds-WP_233480930.1;Parent=gene-LU604_RS26220;Dbxref=Genbank:WP_233480930.1;Name=WP_233480930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374630.1;locus_tag=LU604_RS26220;product=type IV secretory system conjugative DNA transfer family protein;protein_id=WP_233480930.1;transl_table=11 NZ_CP089943.1 RefSeq gene 70042 71199 . + . ID=gene-LU604_RS26225;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=LU604_RS26225;old_locus_tag=LU604_26225 NZ_CP089943.1 Protein Homology CDS 70042 71199 . + 0 ID=cds-WP_233480931.1;Parent=gene-LU604_RS26225;Dbxref=Genbank:WP_233480931.1;Name=WP_233480931.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131826.1;locus_tag=LU604_RS26225;product=plasmid transfer ATPase TraJ;protein_id=WP_233480931.1;transl_table=11 NZ_CP089943.1 RefSeq gene 71196 71456 . + . ID=gene-LU604_RS25855;Name=icmT;gbkey=Gene;gene=icmT;gene_biotype=protein_coding;locus_tag=LU604_RS25855;old_locus_tag=LU604_25855 NZ_CP089943.1 Protein Homology CDS 71196 71456 . + 0 ID=cds-WP_233480932.1;Parent=gene-LU604_RS25855;Dbxref=Genbank:WP_233480932.1;Name=WP_233480932.1;gbkey=CDS;gene=icmT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374628.1;locus_tag=LU604_RS25855;product=IcmT/TraK family protein;protein_id=WP_233480932.1;transl_table=11 ##sequence-region NZ_CP089944.1 1 39625 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=65700 NZ_CP089944.1 RefSeq region 1 39625 . + . ID=NZ_CP089944.1:1..39625;Dbxref=taxon:65700;Is_circular=true;Name=pETR002-a;collection-date=2010;country=USA: Maryland;gbkey=Src;genome=plasmid;isolation-source=Infected agricultural plant;mol_type=genomic DNA;nat-host=Cucumis sativus;plasmid-name=pETR002-a;strain=MDCuke NZ_CP089944.1 RefSeq gene 194 268 . + . ID=gene-LU604_RS26230;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=LU604_RS26230;old_locus_tag=LU604_26230 NZ_CP089944.1 Protein Homology CDS 194 268 . + 0 ID=cds-WP_100208657.1;Parent=gene-LU604_RS26230;Dbxref=Genbank:WP_100208657.1;Name=WP_100208657.1;Ontology_term=GO:0006276,GO:0003674;gbkey=CDS;gene=tap;go_function=molecular_function|0003674||IEA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: protein motif:HMM:TIGR03475.1;locus_tag=LU604_RS26230;product=RepA leader peptide Tap;protein_id=WP_100208657.1;transl_table=11 NZ_CP089944.1 RefSeq gene 261 1124 . + . ID=gene-LU604_RS26235;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=LU604_RS26235;old_locus_tag=LU604_26235 NZ_CP089944.1 Protein Homology CDS 261 1124 . + 0 ID=cds-WP_233480982.1;Parent=gene-LU604_RS26235;Dbxref=Genbank:WP_233480982.1;Name=WP_233480982.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002225475.1;locus_tag=LU604_RS26235;product=incFII family plasmid replication initiator RepA;protein_id=WP_233480982.1;transl_table=11 NZ_CP089944.1 RefSeq gene 1345 1515 . - . ID=gene-LU604_RS26240;Name=LU604_RS26240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26240;old_locus_tag=LU604_26240 NZ_CP089944.1 GeneMarkS-2+ CDS 1345 1515 . - 0 ID=cds-WP_233480983.1;Parent=gene-LU604_RS26240;Dbxref=Genbank:WP_233480983.1;Name=WP_233480983.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26240;product=hypothetical protein;protein_id=WP_233480983.1;transl_table=11 NZ_CP089944.1 RefSeq gene 1770 2024 . - . ID=gene-LU604_RS26245;Name=LU604_RS26245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26245;old_locus_tag=LU604_26245 NZ_CP089944.1 GeneMarkS-2+ CDS 1770 2024 . - 0 ID=cds-WP_233480984.1;Parent=gene-LU604_RS26245;Dbxref=Genbank:WP_233480984.1;Name=WP_233480984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26245;product=hypothetical protein;protein_id=WP_233480984.1;transl_table=11 NZ_CP089944.1 RefSeq gene 2125 2415 . - . ID=gene-LU604_RS26250;Name=LU604_RS26250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26250;old_locus_tag=LU604_26250 NZ_CP089944.1 Protein Homology CDS 2125 2415 . - 0 ID=cds-WP_233480985.1;Parent=gene-LU604_RS26250;Dbxref=Genbank:WP_233480985.1;Name=WP_233480985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122243.1;locus_tag=LU604_RS26250;product=molecular chaperone;protein_id=WP_233480985.1;transl_table=11 NZ_CP089944.1 RefSeq gene 2468 3154 . - . ID=gene-LU604_RS26255;Name=LU604_RS26255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26255;old_locus_tag=LU604_26255 NZ_CP089944.1 Protein Homology CDS 2468 3154 . - 0 ID=cds-WP_233480986.1;Parent=gene-LU604_RS26255;Dbxref=Genbank:WP_233480986.1;Name=WP_233480986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694271.1;locus_tag=LU604_RS26255;product=ParA family protein;protein_id=WP_233480986.1;transl_table=11 NZ_CP089944.1 RefSeq gene 3407 4378 . - . ID=gene-LU604_RS26260;Name=LU604_RS26260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26260;old_locus_tag=LU604_26260 NZ_CP089944.1 Protein Homology CDS 3407 4378 . - 0 ID=cds-WP_233481660.1;Parent=gene-LU604_RS26260;Dbxref=Genbank:WP_233481660.1;Name=WP_233481660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017162391.1;locus_tag=LU604_RS26260;product=recombinase family protein;protein_id=WP_233481660.1;transl_table=11 NZ_CP089944.1 RefSeq gene 4614 4949 . + . ID=gene-LU604_RS26265;Name=LU604_RS26265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26265;old_locus_tag=LU604_26265 NZ_CP089944.1 Protein Homology CDS 4614 4949 . + 0 ID=cds-WP_001147119.1;Parent=gene-LU604_RS26265;Dbxref=Genbank:WP_001147119.1;Name=WP_001147119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026069.1;locus_tag=LU604_RS26265;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001147119.1;transl_table=11 NZ_CP089944.1 RefSeq gene 4946 5302 . + . ID=gene-LU604_RS26270;Name=LU604_RS26270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26270;old_locus_tag=LU604_26270 NZ_CP089944.1 Protein Homology CDS 4946 5302 . + 0 ID=cds-WP_006122339.1;Parent=gene-LU604_RS26270;Dbxref=Genbank:WP_006122339.1;Name=WP_006122339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000127484.1;locus_tag=LU604_RS26270;product=hypothetical protein;protein_id=WP_006122339.1;transl_table=11 NZ_CP089944.1 RefSeq gene 5770 6075 . + . ID=gene-LU604_RS26275;Name=LU604_RS26275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26275;old_locus_tag=LU604_26275 NZ_CP089944.1 Protein Homology CDS 5770 6075 . + 0 ID=cds-WP_233480987.1;Parent=gene-LU604_RS26275;Dbxref=Genbank:WP_233480987.1;Name=WP_233480987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749335.1;locus_tag=LU604_RS26275;product=hypothetical protein;protein_id=WP_233480987.1;transl_table=11 NZ_CP089944.1 RefSeq gene 6138 6431 . + . ID=gene-LU604_RS26280;Name=LU604_RS26280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26280;old_locus_tag=LU604_26280 NZ_CP089944.1 GeneMarkS-2+ CDS 6138 6431 . + 0 ID=cds-WP_233480988.1;Parent=gene-LU604_RS26280;Dbxref=Genbank:WP_233480988.1;Name=WP_233480988.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26280;product=hypothetical protein;protein_id=WP_233480988.1;transl_table=11 NZ_CP089944.1 RefSeq gene 6746 6961 . + . ID=gene-LU604_RS26285;Name=LU604_RS26285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26285;old_locus_tag=LU604_26285 NZ_CP089944.1 Protein Homology CDS 6746 6961 . + 0 ID=cds-WP_233480989.1;Parent=gene-LU604_RS26285;Dbxref=Genbank:WP_233480989.1;Name=WP_233480989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001180116.1;locus_tag=LU604_RS26285;product=hypothetical protein;protein_id=WP_233480989.1;transl_table=11 NZ_CP089944.1 RefSeq gene 7053 7382 . + . ID=gene-LU604_RS26290;Name=LU604_RS26290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26290;old_locus_tag=LU604_26290 NZ_CP089944.1 Protein Homology CDS 7053 7382 . + 0 ID=cds-WP_233480990.1;Parent=gene-LU604_RS26290;Dbxref=Genbank:WP_233480990.1;Name=WP_233480990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000866645.1;locus_tag=LU604_RS26290;product=hypothetical protein;protein_id=WP_233480990.1;transl_table=11 NZ_CP089944.1 RefSeq gene 7434 7628 . + . ID=gene-LU604_RS26295;Name=LU604_RS26295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26295;old_locus_tag=LU604_26295 NZ_CP089944.1 Protein Homology CDS 7434 7628 . + 0 ID=cds-WP_233480991.1;Parent=gene-LU604_RS26295;Dbxref=Genbank:WP_233480991.1;Name=WP_233480991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122357.1;locus_tag=LU604_RS26295;product=hypothetical protein;protein_id=WP_233480991.1;transl_table=11 NZ_CP089944.1 RefSeq gene 8332 8739 . + . ID=gene-LU604_RS26300;Name=LU604_RS26300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26300;old_locus_tag=LU604_26300 NZ_CP089944.1 Protein Homology CDS 8332 8739 . + 0 ID=cds-WP_161617789.1;Parent=gene-LU604_RS26300;Dbxref=Genbank:WP_161617789.1;Name=WP_161617789.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017105.2;locus_tag=LU604_RS26300;product=relaxosome protein TraM;protein_id=WP_161617789.1;transl_table=11 NZ_CP089944.1 RefSeq gene 8890 9510 . - . ID=gene-LU604_RS26305;Name=LU604_RS26305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26305;old_locus_tag=LU604_26305 NZ_CP089944.1 Protein Homology CDS 8890 9510 . - 0 ID=cds-WP_161617790.1;Parent=gene-LU604_RS26305;Dbxref=Genbank:WP_161617790.1;Name=WP_161617790.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039512.1;locus_tag=LU604_RS26305;product=DUF5710 domain-containing protein;protein_id=WP_161617790.1;transl_table=11 NZ_CP089944.1 RefSeq gene 9522 10079 . - . ID=gene-LU604_RS26310;Name=LU604_RS26310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26310;old_locus_tag=LU604_26310 NZ_CP089944.1 Protein Homology CDS 9522 10079 . - 0 ID=cds-WP_233480992.1;Parent=gene-LU604_RS26310;Dbxref=Genbank:WP_233480992.1;Name=WP_233480992.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.2;locus_tag=LU604_RS26310;product=helix-turn-helix domain-containing protein;protein_id=WP_233480992.1;transl_table=11 NZ_CP089944.1 RefSeq gene 10400 11032 . + . ID=gene-LU604_RS26315;Name=LU604_RS26315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26315;old_locus_tag=LU604_26315 NZ_CP089944.1 Protein Homology CDS 10400 11032 . + 0 ID=cds-WP_233480993.1;Parent=gene-LU604_RS26315;Dbxref=Genbank:WP_233480993.1;Name=WP_233480993.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014417.2;locus_tag=LU604_RS26315;product=transcriptional antiterminator NusG;protein_id=WP_233480993.1;transl_table=11 NZ_CP089944.1 RefSeq gene 11095 11310 . + . ID=gene-LU604_RS26320;Name=LU604_RS26320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26320;old_locus_tag=LU604_26320 NZ_CP089944.1 GeneMarkS-2+ CDS 11095 11310 . + 0 ID=cds-WP_161617793.1;Parent=gene-LU604_RS26320;Dbxref=Genbank:WP_161617793.1;Name=WP_161617793.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26320;product=hypothetical protein;protein_id=WP_161617793.1;transl_table=11 NZ_CP089944.1 RefSeq gene 11628 11960 . + . ID=gene-LU604_RS26325;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=LU604_RS26325;old_locus_tag=LU604_26325 NZ_CP089944.1 Protein Homology CDS 11628 11960 . + 0 ID=cds-WP_233480994.1;Parent=gene-LU604_RS26325;Dbxref=Genbank:WP_233480994.1;Name=WP_233480994.1;gbkey=CDS;gene=traA;inference=COORDINATES: protein motif:HMM:NF017337.2;locus_tag=LU604_RS26325;product=type IV conjugative transfer system pilin TraA;protein_id=WP_233480994.1;transl_table=11 NZ_CP089944.1 RefSeq gene 11973 12281 . + . ID=gene-LU604_RS26330;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=LU604_RS26330;old_locus_tag=LU604_26330 NZ_CP089944.1 Protein Homology CDS 11973 12281 . + 0 ID=cds-WP_233480995.1;Parent=gene-LU604_RS26330;Dbxref=Genbank:WP_233480995.1;Name=WP_233480995.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032490353.1;locus_tag=LU604_RS26330;product=type IV conjugative transfer system protein TraL;protein_id=WP_233480995.1;transl_table=11 NZ_CP089944.1 RefSeq gene 12294 12863 . + . ID=gene-LU604_RS26335;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=LU604_RS26335;old_locus_tag=LU604_26335 NZ_CP089944.1 Protein Homology CDS 12294 12863 . + 0 ID=cds-WP_233480996.1;Parent=gene-LU604_RS26335;Dbxref=Genbank:WP_233480996.1;Name=WP_233480996.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395451.1;locus_tag=LU604_RS26335;product=type IV conjugative transfer system protein TraE;protein_id=WP_233480996.1;transl_table=11 NZ_CP089944.1 RefSeq gene 12847 13578 . + . ID=gene-LU604_RS26340;Name=LU604_RS26340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26340;old_locus_tag=LU604_26340 NZ_CP089944.1 Protein Homology CDS 12847 13578 . + 0 ID=cds-WP_161617797.1;Parent=gene-LU604_RS26340;Dbxref=Genbank:WP_161617797.1;Name=WP_161617797.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018311.2;locus_tag=LU604_RS26340;product=type-F conjugative transfer system secretin TraK;protein_id=WP_161617797.1;transl_table=11 NZ_CP089944.1 RefSeq gene 13575 14936 . + . ID=gene-LU604_RS26345;Name=traB;gbkey=Gene;gene=traB;gene_biotype=protein_coding;locus_tag=LU604_RS26345;old_locus_tag=LU604_26345 NZ_CP089944.1 Protein Homology CDS 13575 14936 . + 0 ID=cds-WP_161617798.1;Parent=gene-LU604_RS26345;Dbxref=Genbank:WP_161617798.1;Name=WP_161617798.1;gbkey=CDS;gene=traB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000024510.1;locus_tag=LU604_RS26345;product=F-type conjugal transfer pilus assembly protein TraB;protein_id=WP_161617798.1;transl_table=11 NZ_CP089944.1 RefSeq gene 14946 15107 . + . ID=gene-LU604_RS26350;Name=LU604_RS26350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26350;old_locus_tag=LU604_26350 NZ_CP089944.1 GeneMarkS-2+ CDS 14946 15107 . + 0 ID=cds-WP_161617799.1;Parent=gene-LU604_RS26350;Dbxref=Genbank:WP_161617799.1;Name=WP_161617799.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26350;product=hypothetical protein;protein_id=WP_161617799.1;transl_table=11 NZ_CP089944.1 RefSeq gene 15119 15367 . + . ID=gene-LU604_RS26355;Name=LU604_RS26355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26355;old_locus_tag=LU604_26355 NZ_CP089944.1 GeneMarkS-2+ CDS 15119 15367 . + 0 ID=cds-WP_161617800.1;Parent=gene-LU604_RS26355;Dbxref=Genbank:WP_161617800.1;Name=WP_161617800.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26355;product=hypothetical protein;protein_id=WP_161617800.1;transl_table=11 NZ_CP089944.1 RefSeq gene 15357 15704 . + . ID=gene-LU604_RS26360;Name=LU604_RS26360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26360;old_locus_tag=LU604_26360 NZ_CP089944.1 GeneMarkS-2+ CDS 15357 15704 . + 0 ID=cds-WP_233481661.1;Parent=gene-LU604_RS26360;Dbxref=Genbank:WP_233481661.1;Name=WP_233481661.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26360;product=hypothetical protein;protein_id=WP_233481661.1;transl_table=11 NZ_CP089944.1 RefSeq gene 15927 16307 . + . ID=gene-LU604_RS26365;Name=LU604_RS26365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26365;old_locus_tag=LU604_26365 NZ_CP089944.1 Protein Homology CDS 15927 16307 . + 0 ID=cds-WP_233481662.1;Parent=gene-LU604_RS26365;Dbxref=Genbank:WP_233481662.1;Name=WP_233481662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008324154.1;locus_tag=LU604_RS26365;product=TraV family lipoprotein;protein_id=WP_233481662.1;transl_table=11 NZ_CP089944.1 RefSeq gene 16304 18898 . + . ID=gene-LU604_RS26370;Name=traC;gbkey=Gene;gene=traC;gene_biotype=protein_coding;locus_tag=LU604_RS26370;old_locus_tag=LU604_26370 NZ_CP089944.1 Protein Homology CDS 16304 18898 . + 0 ID=cds-WP_233480999.1;Parent=gene-LU604_RS26370;Dbxref=Genbank:WP_233480999.1;Name=WP_233480999.1;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004966209.1;locus_tag=LU604_RS26370;product=type IV secretion system protein TraC;protein_id=WP_233480999.1;transl_table=11 NZ_CP089944.1 RefSeq gene 18886 19290 . + . ID=gene-LU604_RS26375;Name=trbI;gbkey=Gene;gene=trbI;gene_biotype=protein_coding;locus_tag=LU604_RS26375;old_locus_tag=LU604_26375 NZ_CP089944.1 Protein Homology CDS 18886 19290 . + 0 ID=cds-WP_233481000.1;Parent=gene-LU604_RS26375;Dbxref=Genbank:WP_233481000.1;Name=WP_233481000.1;gbkey=CDS;gene=trbI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004558355.1;locus_tag=LU604_RS26375;product=type-F conjugative transfer system protein TrbI;protein_id=WP_233481000.1;transl_table=11 NZ_CP089944.1 RefSeq gene 19290 19916 . + . ID=gene-LU604_RS26380;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=LU604_RS26380;old_locus_tag=LU604_26380 NZ_CP089944.1 Protein Homology CDS 19290 19916 . + 0 ID=cds-WP_233481001.1;Parent=gene-LU604_RS26380;Dbxref=Genbank:WP_233481001.1;Name=WP_233481001.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525788.1;locus_tag=LU604_RS26380;product=type-F conjugative transfer system protein TraW;protein_id=WP_233481001.1;transl_table=11 NZ_CP089944.1 RefSeq gene 19937 20899 . + . ID=gene-LU604_RS26385;Name=traU;gbkey=Gene;gene=traU;gene_biotype=protein_coding;locus_tag=LU604_RS26385;old_locus_tag=LU604_26385 NZ_CP089944.1 Protein Homology CDS 19937 20899 . + 0 ID=cds-WP_233480969.1;Parent=gene-LU604_RS26385;Dbxref=Genbank:WP_233480969.1;Name=WP_233480969.1;gbkey=CDS;gene=traU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322002.1;locus_tag=LU604_RS26385;product=conjugal transfer pilus assembly protein TraU;protein_id=WP_233480969.1;transl_table=11 NZ_CP089944.1 RefSeq gene 20915 21520 . + . ID=gene-LU604_RS26390;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=LU604_RS26390;old_locus_tag=LU604_26390 NZ_CP089944.1 Protein Homology CDS 20915 21520 . + 0 ID=cds-WP_233480970.1;Parent=gene-LU604_RS26390;Dbxref=Genbank:WP_233480970.1;Name=WP_233480970.1;gbkey=CDS;gene=trbC;inference=COORDINATES: protein motif:HMM:TIGR02742.1;locus_tag=LU604_RS26390;product=type-F conjugative transfer system pilin assembly protein TrbC;protein_id=WP_233480970.1;transl_table=11 NZ_CP089944.1 RefSeq gene 21517 23349 . + . ID=gene-LU604_RS26395;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=LU604_RS26395;old_locus_tag=LU604_26395 NZ_CP089944.1 Protein Homology CDS 21517 23349 . + 0 ID=cds-WP_233480971.1;Parent=gene-LU604_RS26395;Dbxref=Genbank:WP_233480971.1;Name=WP_233480971.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000833260.1;locus_tag=LU604_RS26395;product=type-F conjugative transfer system mating-pair stabilization protein TraN;protein_id=WP_233480971.1;transl_table=11 NZ_CP089944.1 RefSeq gene 23349 24134 . + . ID=gene-LU604_RS26400;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=LU604_RS26400;old_locus_tag=LU604_26400 NZ_CP089944.1 Protein Homology CDS 23349 24134 . + 0 ID=cds-WP_233480972.1;Parent=gene-LU604_RS26400;Dbxref=Genbank:WP_233480972.1;Name=WP_233480972.1;gbkey=CDS;gene=traF;inference=COORDINATES: protein motif:HMM:TIGR02739.1;locus_tag=LU604_RS26400;product=type-F conjugative transfer system pilin assembly protein TraF;protein_id=WP_233480972.1;transl_table=11 NZ_CP089944.1 RefSeq gene 24320 24856 . + . ID=gene-LU604_RS26405;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=LU604_RS26405;old_locus_tag=LU604_26405 NZ_CP089944.1 Protein Homology CDS 24320 24856 . + 0 ID=cds-WP_233480973.1;Parent=gene-LU604_RS26405;Dbxref=Genbank:WP_233480973.1;Name=WP_233480973.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052622.1;locus_tag=LU604_RS26405;product=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;protein_id=WP_233480973.1;transl_table=11 NZ_CP089944.1 RefSeq gene 24853 26217 . + . ID=gene-LU604_RS26410;Name=traH;gbkey=Gene;gene=traH;gene_biotype=protein_coding;locus_tag=LU604_RS26410;old_locus_tag=LU604_26410 NZ_CP089944.1 Protein Homology CDS 24853 26217 . + 0 ID=cds-WP_233480974.1;Parent=gene-LU604_RS26410;Dbxref=Genbank:WP_233480974.1;Name=WP_233480974.1;gbkey=CDS;gene=traH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020315127.1;locus_tag=LU604_RS26410;product=F-type conjugal transfer protein TraH;protein_id=WP_233480974.1;transl_table=11 NZ_CP089944.1 RefSeq gene 26220 29063 . + . ID=gene-LU604_RS26415;Name=traG;gbkey=Gene;gene=traG;gene_biotype=protein_coding;locus_tag=LU604_RS26415;old_locus_tag=LU604_26415 NZ_CP089944.1 Protein Homology CDS 26220 29063 . + 0 ID=cds-WP_233480975.1;Parent=gene-LU604_RS26415;Dbxref=Genbank:WP_233480975.1;Name=WP_233480975.1;gbkey=CDS;gene=traG;inference=COORDINATES: protein motif:HMM:NF010295.2;locus_tag=LU604_RS26415;product=conjugal transfer mating pair stabilization protein TraG;protein_id=WP_233480975.1;transl_table=11 NZ_CP089944.1 RefSeq gene 29056 29883 . + . ID=gene-LU604_RS26420;Name=LU604_RS26420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26420;old_locus_tag=LU604_26420 NZ_CP089944.1 GeneMarkS-2+ CDS 29056 29883 . + 0 ID=cds-WP_233480976.1;Parent=gene-LU604_RS26420;Dbxref=Genbank:WP_233480976.1;Name=WP_233480976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26420;product=hypothetical protein;protein_id=WP_233480976.1;transl_table=11 NZ_CP089944.1 RefSeq gene 29983 30450 . + . ID=gene-LU604_RS26425;Name=LU604_RS26425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26425;old_locus_tag=LU604_26425 NZ_CP089944.1 Protein Homology CDS 29983 30450 . + 0 ID=cds-WP_233480977.1;Parent=gene-LU604_RS26425;Dbxref=Genbank:WP_233480977.1;Name=WP_233480977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193183.1;locus_tag=LU604_RS26425;product=lytic transglycosylase domain-containing protein;protein_id=WP_233480977.1;transl_table=11 NZ_CP089944.1 RefSeq gene 30472 32610 . + . ID=gene-LU604_RS26430;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=LU604_RS26430;old_locus_tag=LU604_26430 NZ_CP089944.1 Protein Homology CDS 30472 32610 . + 0 ID=cds-WP_233480978.1;Parent=gene-LU604_RS26430;Dbxref=Genbank:WP_233480978.1;Name=WP_233480978.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193184.1;locus_tag=LU604_RS26430;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_233480978.1;transl_table=11 NZ_CP089944.1 RefSeq gene 32610 37832 . + . ID=gene-LU604_RS26435;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=LU604_RS26435;old_locus_tag=LU604_26435 NZ_CP089944.1 Protein Homology CDS 32610 37832 . + 0 ID=cds-WP_233480979.1;Parent=gene-LU604_RS26435;Dbxref=Genbank:WP_233480979.1;Name=WP_233480979.1;gbkey=CDS;gene=traI;inference=COORDINATES: protein motif:HMM:TIGR02760.1;locus_tag=LU604_RS26435;product=conjugative transfer relaxase/helicase TraI;protein_id=WP_233480979.1;transl_table=11 NZ_CP089944.1 RefSeq gene 37842 38489 . - . ID=gene-LU604_RS26440;Name=LU604_RS26440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26440;old_locus_tag=LU604_26440 NZ_CP089944.1 Protein Homology CDS 37842 38489 . - 0 ID=cds-WP_233480980.1;Parent=gene-LU604_RS26440;Dbxref=Genbank:WP_233480980.1;Name=WP_233480980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193191.1;locus_tag=LU604_RS26440;product=DUF2913 family protein;protein_id=WP_233480980.1;transl_table=11 NZ_CP089944.1 RefSeq gene 38614 39177 . + . ID=gene-LU604_RS26445;Name=LU604_RS26445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26445;old_locus_tag=LU604_26445 NZ_CP089944.1 Protein Homology CDS 38614 39177 . + 0 ID=cds-WP_233480981.1;Parent=gene-LU604_RS26445;Dbxref=Genbank:WP_233480981.1;Name=WP_233480981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008324931.1;locus_tag=LU604_RS26445;product=phospholipase D family protein;protein_id=WP_233480981.1;transl_table=11 NZ_CP089944.1 RefSeq gene 39324 39584 . + . ID=gene-LU604_RS26450;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=LU604_RS26450;old_locus_tag=LU604_26450 NZ_CP089944.1 Protein Homology CDS 39324 39584 . + 0 ID=cds-WP_161617811.1;Parent=gene-LU604_RS26450;Dbxref=Genbank:WP_161617811.1;Name=WP_161617811.1;gbkey=CDS;gene=repA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192946.1;locus_tag=LU604_RS26450;product=replication regulatory protein RepA;protein_id=WP_161617811.1;transl_table=11 ##sequence-region NZ_CP089945.1 1 31842 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=65700 NZ_CP089945.1 RefSeq region 1 31842 . + . ID=NZ_CP089945.1:1..31842;Dbxref=taxon:65700;Is_circular=true;Name=pETR003-a;collection-date=2010;country=USA: Maryland;gbkey=Src;genome=plasmid;isolation-source=Infected agricultural plant;mol_type=genomic DNA;nat-host=Cucumis sativus;plasmid-name=pETR003-a;strain=MDCuke NZ_CP089945.1 RefSeq gene 97 363 . + . ID=gene-LU604_RS26460;Name=LU604_RS26460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26460;old_locus_tag=LU604_26460 NZ_CP089945.1 GeneMarkS-2+ CDS 97 363 . + 0 ID=cds-WP_233481682.1;Parent=gene-LU604_RS26460;Dbxref=Genbank:WP_233481682.1;Name=WP_233481682.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26460;product=hypothetical protein;protein_id=WP_233481682.1;transl_table=11 NZ_CP089945.1 RefSeq gene 347 1474 . + . ID=gene-LU604_RS26465;Name=LU604_RS26465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26465;old_locus_tag=LU604_26465 NZ_CP089945.1 Protein Homology CDS 347 1474 . + 0 ID=cds-WP_233481683.1;Parent=gene-LU604_RS26465;Dbxref=Genbank:WP_233481683.1;Name=WP_233481683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257162.1;locus_tag=LU604_RS26465;product=baseplate J/gp47 family protein;protein_id=WP_233481683.1;transl_table=11 NZ_CP089945.1 RefSeq gene 1467 2132 . + . ID=gene-LU604_RS26470;Name=LU604_RS26470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26470;old_locus_tag=LU604_26470 NZ_CP089945.1 Protein Homology CDS 1467 2132 . + 0 ID=cds-WP_233481684.1;Parent=gene-LU604_RS26470;Dbxref=Genbank:WP_233481684.1;Name=WP_233481684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257163.1;locus_tag=LU604_RS26470;product=DUF2612 domain-containing protein;protein_id=WP_233481684.1;transl_table=11 NZ_CP089945.1 RefSeq gene 2110 3279 . + . ID=gene-LU604_RS26475;Name=LU604_RS26475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26475;old_locus_tag=LU604_26475 NZ_CP089945.1 Protein Homology CDS 2110 3279 . + 0 ID=cds-WP_233481685.1;Parent=gene-LU604_RS26475;Dbxref=Genbank:WP_233481685.1;Name=WP_233481685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001180480.1;locus_tag=LU604_RS26475;product=phage tail protein;protein_id=WP_233481685.1;transl_table=11 NZ_CP089945.1 RefSeq gene 3279 3842 . + . ID=gene-LU604_RS26480;Name=LU604_RS26480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26480;old_locus_tag=LU604_26480 NZ_CP089945.1 Protein Homology CDS 3279 3842 . + 0 ID=cds-WP_233481686.1;Parent=gene-LU604_RS26480;Dbxref=Genbank:WP_233481686.1;Name=WP_233481686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001711184.1;locus_tag=LU604_RS26480;product=tail fiber assembly protein;protein_id=WP_233481686.1;transl_table=11 NZ_CP089945.1 RefSeq gene 3832 4344 . - . ID=gene-LU604_RS26485;Name=LU604_RS26485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26485;old_locus_tag=LU604_26485 NZ_CP089945.1 Protein Homology CDS 3832 4344 . - 0 ID=cds-WP_233481687.1;Parent=gene-LU604_RS26485;Dbxref=Genbank:WP_233481687.1;Name=WP_233481687.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025953.2;locus_tag=LU604_RS26485;product=DapH/DapD/GlmU-related protein;protein_id=WP_233481687.1;transl_table=11 NZ_CP089945.1 RefSeq gene 4341 4988 . - . ID=gene-LU604_RS26490;Name=LU604_RS26490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26490;old_locus_tag=LU604_26490 NZ_CP089945.1 Protein Homology CDS 4341 4988 . - 0 ID=cds-WP_233481688.1;Parent=gene-LU604_RS26490;Dbxref=Genbank:WP_233481688.1;Name=WP_233481688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016261353.1;locus_tag=LU604_RS26490;product=DNA-binding protein;protein_id=WP_233481688.1;transl_table=11 NZ_CP089945.1 RefSeq gene 5042 5197 . - . ID=gene-LU604_RS26495;Name=LU604_RS26495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26495;old_locus_tag=LU604_26495 NZ_CP089945.1 GeneMarkS-2+ CDS 5042 5197 . - 0 ID=cds-WP_233481689.1;Parent=gene-LU604_RS26495;Dbxref=Genbank:WP_233481689.1;Name=WP_233481689.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26495;product=hypothetical protein;protein_id=WP_233481689.1;transl_table=11 NZ_CP089945.1 RefSeq gene 5265 6293 . - . ID=gene-LU604_RS26500;Name=LU604_RS26500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26500;old_locus_tag=LU604_26500 NZ_CP089945.1 Protein Homology CDS 5265 6293 . - 0 ID=cds-WP_233481690.1;Parent=gene-LU604_RS26500;Dbxref=Genbank:WP_233481690.1;Name=WP_233481690.1;Ontology_term=GO:0006259,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016261352.1;locus_tag=LU604_RS26500;product=recombinase RecT;protein_id=WP_233481690.1;transl_table=11 NZ_CP089945.1 RefSeq gene 6290 8386 . - . ID=gene-LU604_RS26505;Name=LU604_RS26505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26505;old_locus_tag=LU604_26505 NZ_CP089945.1 Protein Homology CDS 6290 8386 . - 0 ID=cds-WP_233481691.1;Parent=gene-LU604_RS26505;Dbxref=Genbank:WP_233481691.1;Name=WP_233481691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257046.1;locus_tag=LU604_RS26505;product=PD-(D/E)XK nuclease-like domain-containing protein;protein_id=WP_233481691.1;transl_table=11 NZ_CP089945.1 RefSeq gene 8383 8523 . - . ID=gene-LU604_RS26510;Name=LU604_RS26510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26510;old_locus_tag=LU604_26510 NZ_CP089945.1 GeneMarkS-2+ CDS 8383 8523 . - 0 ID=cds-WP_186821292.1;Parent=gene-LU604_RS26510;Dbxref=Genbank:WP_186821292.1;Name=WP_186821292.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26510;product=hypothetical protein;protein_id=WP_186821292.1;transl_table=11 NZ_CP089945.1 RefSeq gene 8601 9074 . - . ID=gene-LU604_RS26515;Name=LU604_RS26515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26515;old_locus_tag=LU604_26515 NZ_CP089945.1 Protein Homology CDS 8601 9074 . - 0 ID=cds-WP_233481692.1;Parent=gene-LU604_RS26515;Dbxref=Genbank:WP_233481692.1;Name=WP_233481692.1;Ontology_term=GO:0006260,GO:0006276;gbkey=CDS;go_process=DNA replication|0006260||IEA,plasmid maintenance|0006276||IEA;inference=COORDINATES: protein motif:HMM:NF017542.2;locus_tag=LU604_RS26515;product=replication/maintenance protein RepL;protein_id=WP_233481692.1;transl_table=11 NZ_CP089945.1 RefSeq gene 9563 9799 . - . ID=gene-LU604_RS26520;Name=LU604_RS26520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26520;old_locus_tag=LU604_26520 NZ_CP089945.1 GeneMarkS-2+ CDS 9563 9799 . - 0 ID=cds-WP_233481693.1;Parent=gene-LU604_RS26520;Dbxref=Genbank:WP_233481693.1;Name=WP_233481693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26520;product=hypothetical protein;protein_id=WP_233481693.1;transl_table=11 NZ_CP089945.1 RefSeq gene 9860 10213 . + . ID=gene-LU604_RS26525;Name=LU604_RS26525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26525;old_locus_tag=LU604_26525 NZ_CP089945.1 Protein Homology CDS 9860 10213 . + 0 ID=cds-WP_233481694.1;Parent=gene-LU604_RS26525;Dbxref=Genbank:WP_233481694.1;Name=WP_233481694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257352.1;locus_tag=LU604_RS26525;product=hypothetical protein;protein_id=WP_233481694.1;transl_table=11 NZ_CP089945.1 RefSeq gene 10434 10730 . + . ID=gene-LU604_RS26530;Name=LU604_RS26530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26530;old_locus_tag=LU604_26530 NZ_CP089945.1 GeneMarkS-2+ CDS 10434 10730 . + 0 ID=cds-WP_233481695.1;Parent=gene-LU604_RS26530;Dbxref=Genbank:WP_233481695.1;Name=WP_233481695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26530;product=hypothetical protein;protein_id=WP_233481695.1;transl_table=11 NZ_CP089945.1 RefSeq gene 10733 10918 . + . ID=gene-LU604_RS26535;Name=LU604_RS26535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26535;old_locus_tag=LU604_26535 NZ_CP089945.1 Protein Homology CDS 10733 10918 . + 0 ID=cds-WP_233481696.1;Parent=gene-LU604_RS26535;Dbxref=Genbank:WP_233481696.1;Name=WP_233481696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016054520.1;locus_tag=LU604_RS26535;product=DUF551 domain-containing protein;protein_id=WP_233481696.1;transl_table=11 NZ_CP089945.1 RefSeq gene 10912 11127 . - . ID=gene-LU604_RS26540;Name=LU604_RS26540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26540;old_locus_tag=LU604_26540 NZ_CP089945.1 Protein Homology CDS 10912 11127 . - 0 ID=cds-WP_233481697.1;Parent=gene-LU604_RS26540;Dbxref=Genbank:WP_233481697.1;Name=WP_233481697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017412830.1;locus_tag=LU604_RS26540;product=WGR domain-containing protein;protein_id=WP_233481697.1;transl_table=11 NZ_CP089945.1 RefSeq gene 11262 11489 . - . ID=gene-LU604_RS26545;Name=LU604_RS26545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26545;old_locus_tag=LU604_26545 NZ_CP089945.1 Protein Homology CDS 11262 11489 . - 0 ID=cds-WP_233481698.1;Parent=gene-LU604_RS26545;Dbxref=Genbank:WP_233481698.1;Name=WP_233481698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257348.1;locus_tag=LU604_RS26545;product=hypothetical protein;protein_id=WP_233481698.1;transl_table=11 NZ_CP089945.1 RefSeq gene 11486 12109 . - . ID=gene-LU604_RS26550;Name=LU604_RS26550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26550;old_locus_tag=LU604_26550 NZ_CP089945.1 Protein Homology CDS 11486 12109 . - 0 ID=cds-WP_233481012.1;Parent=gene-LU604_RS26550;Dbxref=Genbank:WP_233481012.1;Name=WP_233481012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257347.1;locus_tag=LU604_RS26550;product=ParA family protein;protein_id=WP_233481012.1;transl_table=11 NZ_CP089945.1 RefSeq gene 12544 12711 . + . ID=gene-LU604_RS26555;Name=LU604_RS26555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26555;old_locus_tag=LU604_26555 NZ_CP089945.1 GeneMarkS-2+ CDS 12544 12711 . + 0 ID=cds-WP_233481699.1;Parent=gene-LU604_RS26555;Dbxref=Genbank:WP_233481699.1;Name=WP_233481699.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26555;product=hypothetical protein;protein_id=WP_233481699.1;transl_table=11 NZ_CP089945.1 RefSeq gene 12728 13030 . + . ID=gene-LU604_RS26560;Name=LU604_RS26560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26560;old_locus_tag=LU604_26560 NZ_CP089945.1 Protein Homology CDS 12728 13030 . + 0 ID=cds-WP_233481700.1;Parent=gene-LU604_RS26560;Dbxref=Genbank:WP_233481700.1;Name=WP_233481700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257346.1;locus_tag=LU604_RS26560;product=phage holin family protein;protein_id=WP_233481700.1;transl_table=11 NZ_CP089945.1 RefSeq gene 13038 13463 . + . ID=gene-LU604_RS26565;Name=LU604_RS26565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26565;old_locus_tag=LU604_26565 NZ_CP089945.1 Protein Homology CDS 13038 13463 . + 0 ID=cds-WP_233481704.1;Parent=gene-LU604_RS26565;Dbxref=Genbank:WP_233481704.1;Name=WP_233481704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015835243.1;locus_tag=LU604_RS26565;product=lysozyme;protein_id=WP_233481704.1;transl_table=11 NZ_CP089945.1 RefSeq gene 13460 13978 . + . ID=gene-LU604_RS26570;Name=LU604_RS26570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26570;old_locus_tag=LU604_26570 NZ_CP089945.1 Protein Homology CDS 13460 13978 . + 0 ID=cds-WP_233481701.1;Parent=gene-LU604_RS26570;Dbxref=Genbank:WP_233481701.1;Name=WP_233481701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257344.1;locus_tag=LU604_RS26570;product=DUF2514 family protein;protein_id=WP_233481701.1;transl_table=11 NZ_CP089945.1 RefSeq gene 14014 15048 . + . ID=gene-LU604_RS26575;Name=LU604_RS26575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26575;old_locus_tag=LU604_26575 NZ_CP089945.1 Protein Homology CDS 14014 15048 . + 0 ID=cds-WP_233481702.1;Parent=gene-LU604_RS26575;Dbxref=Genbank:WP_233481702.1;Name=WP_233481702.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=LU604_RS26575;product=site-specific integrase;protein_id=WP_233481702.1;transl_table=11 NZ_CP089945.1 RefSeq gene 15228 15944 . + . ID=gene-LU604_RS26580;Name=LU604_RS26580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26580;old_locus_tag=LU604_26580 NZ_CP089945.1 Protein Homology CDS 15228 15944 . + 0 ID=cds-WP_233481703.1;Parent=gene-LU604_RS26580;Dbxref=Genbank:WP_233481703.1;Name=WP_233481703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257342.1;locus_tag=LU604_RS26580;product=hypothetical protein;protein_id=WP_233481703.1;transl_table=11 NZ_CP089945.1 RefSeq gene 15922 17151 . + . ID=gene-LU604_RS26585;Name=LU604_RS26585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26585;old_locus_tag=LU604_26585 NZ_CP089945.1 Protein Homology CDS 15922 17151 . + 0 ID=cds-WP_233481663.1;Parent=gene-LU604_RS26585;Dbxref=Genbank:WP_233481663.1;Name=WP_233481663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147121.1;locus_tag=LU604_RS26585;product=phage terminase large subunit;protein_id=WP_233481663.1;transl_table=11 NZ_CP089945.1 RefSeq gene 17274 17879 . + . ID=gene-LU604_RS26590;Name=LU604_RS26590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26590;old_locus_tag=LU604_26590 NZ_CP089945.1 Protein Homology CDS 17274 17879 . + 0 ID=cds-WP_233481664.1;Parent=gene-LU604_RS26590;Dbxref=Genbank:WP_233481664.1;Name=WP_233481664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009093281.1;locus_tag=LU604_RS26590;product=recombinase family protein;protein_id=WP_233481664.1;transl_table=11 NZ_CP089945.1 RefSeq gene 17870 18112 . + . ID=gene-LU604_RS26595;Name=LU604_RS26595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26595;old_locus_tag=LU604_26595 NZ_CP089945.1 Protein Homology CDS 17870 18112 . + 0 ID=cds-WP_233481665.1;Parent=gene-LU604_RS26595;Dbxref=Genbank:WP_233481665.1;Name=WP_233481665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006709184.1;locus_tag=LU604_RS26595;product=DUF4160 domain-containing protein;protein_id=WP_233481665.1;transl_table=11 NZ_CP089945.1 RefSeq gene 18096 18344 . + . ID=gene-LU604_RS26600;Name=LU604_RS26600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26600;old_locus_tag=LU604_26600 NZ_CP089945.1 Protein Homology CDS 18096 18344 . + 0 ID=cds-WP_233481666.1;Parent=gene-LU604_RS26600;Dbxref=Genbank:WP_233481666.1;Name=WP_233481666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379051.1;locus_tag=LU604_RS26600;product=DUF2442 domain-containing protein;protein_id=WP_233481666.1;transl_table=11 NZ_CP089945.1 RefSeq gene 18385 19743 . + . ID=gene-LU604_RS26605;Name=LU604_RS26605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26605;old_locus_tag=LU604_26605 NZ_CP089945.1 Protein Homology CDS 18385 19743 . + 0 ID=cds-WP_233481667.1;Parent=gene-LU604_RS26605;Dbxref=Genbank:WP_233481667.1;Name=WP_233481667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257338.1;locus_tag=LU604_RS26605;product=DUF1073 domain-containing protein;protein_id=WP_233481667.1;transl_table=11 NZ_CP089945.1 RefSeq gene 19680 20528 . + . ID=gene-LU604_RS26610;Name=LU604_RS26610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26610;old_locus_tag=LU604_26610 NZ_CP089945.1 Protein Homology CDS 19680 20528 . + 0 ID=cds-WP_233481668.1;Parent=gene-LU604_RS26610;Dbxref=Genbank:WP_233481668.1;Name=WP_233481668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001767241.1;locus_tag=LU604_RS26610;product=phage minor head protein;protein_id=WP_233481668.1;transl_table=11 NZ_CP089945.1 RefSeq gene 20554 21717 . + . ID=gene-LU604_RS26615;Name=LU604_RS26615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26615;old_locus_tag=LU604_26615 NZ_CP089945.1 Protein Homology CDS 20554 21717 . + 0 ID=cds-WP_233481669.1;Parent=gene-LU604_RS26615;Dbxref=Genbank:WP_233481669.1;Name=WP_233481669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257336.1;locus_tag=LU604_RS26615;product=DUF2213 domain-containing protein;protein_id=WP_233481669.1;transl_table=11 NZ_CP089945.1 RefSeq gene 21720 22217 . + . ID=gene-LU604_RS26620;Name=LU604_RS26620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26620;old_locus_tag=LU604_26620 NZ_CP089945.1 Protein Homology CDS 21720 22217 . + 0 ID=cds-WP_233481670.1;Parent=gene-LU604_RS26620;Dbxref=Genbank:WP_233481670.1;Name=WP_233481670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257335.1;locus_tag=LU604_RS26620;product=hypothetical protein;protein_id=WP_233481670.1;transl_table=11 NZ_CP089945.1 RefSeq gene 22223 23161 . + . ID=gene-LU604_RS26625;Name=LU604_RS26625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26625;old_locus_tag=LU604_26625 NZ_CP089945.1 Protein Homology CDS 22223 23161 . + 0 ID=cds-WP_233481671.1;Parent=gene-LU604_RS26625;Dbxref=Genbank:WP_233481671.1;Name=WP_233481671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257334.1;locus_tag=LU604_RS26625;product=DUF2184 domain-containing protein;protein_id=WP_233481671.1;transl_table=11 NZ_CP089945.1 RefSeq gene 23175 23540 . + . ID=gene-LU604_RS26630;Name=LU604_RS26630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26630;old_locus_tag=LU604_26630 NZ_CP089945.1 Protein Homology CDS 23175 23540 . + 0 ID=cds-WP_016257333.1;Parent=gene-LU604_RS26630;Dbxref=Genbank:WP_016257333.1;Name=WP_016257333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257333.1;locus_tag=LU604_RS26630;product=DUF4054 domain-containing protein;protein_id=WP_016257333.1;transl_table=11 NZ_CP089945.1 RefSeq gene 23551 24084 . + . ID=gene-LU604_RS26635;Name=LU604_RS26635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26635;old_locus_tag=LU604_26635 NZ_CP089945.1 Protein Homology CDS 23551 24084 . + 0 ID=cds-WP_233481672.1;Parent=gene-LU604_RS26635;Dbxref=Genbank:WP_233481672.1;Name=WP_233481672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016261355.1;locus_tag=LU604_RS26635;product=hypothetical protein;protein_id=WP_233481672.1;transl_table=11 NZ_CP089945.1 RefSeq gene 24077 24451 . + . ID=gene-LU604_RS26640;Name=LU604_RS26640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26640;old_locus_tag=LU604_26640 NZ_CP089945.1 Protein Homology CDS 24077 24451 . + 0 ID=cds-WP_016257032.1;Parent=gene-LU604_RS26640;Dbxref=Genbank:WP_016257032.1;Name=WP_016257032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257032.1;locus_tag=LU604_RS26640;product=hypothetical protein;protein_id=WP_016257032.1;transl_table=11 NZ_CP089945.1 RefSeq gene 24438 24875 . + . ID=gene-LU604_RS26645;Name=LU604_RS26645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26645;old_locus_tag=LU604_26645 NZ_CP089945.1 Protein Homology CDS 24438 24875 . + 0 ID=cds-WP_233481673.1;Parent=gene-LU604_RS26645;Dbxref=Genbank:WP_233481673.1;Name=WP_233481673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147112.1;locus_tag=LU604_RS26645;product=hypothetical protein;protein_id=WP_233481673.1;transl_table=11 NZ_CP089945.1 RefSeq gene 24872 26386 . + . ID=gene-LU604_RS26650;Name=LU604_RS26650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26650;old_locus_tag=LU604_26650 NZ_CP089945.1 Protein Homology CDS 24872 26386 . + 0 ID=cds-WP_233481674.1;Parent=gene-LU604_RS26650;Dbxref=Genbank:WP_233481674.1;Name=WP_233481674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015835229.1;locus_tag=LU604_RS26650;product=DUF3383 domain-containing protein;protein_id=WP_233481674.1;transl_table=11 NZ_CP089945.1 RefSeq gene 26397 26822 . + . ID=gene-LU604_RS26655;Name=LU604_RS26655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26655;old_locus_tag=LU604_26655 NZ_CP089945.1 Protein Homology CDS 26397 26822 . + 0 ID=cds-WP_233481675.1;Parent=gene-LU604_RS26655;Dbxref=Genbank:WP_233481675.1;Name=WP_233481675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257034.1;locus_tag=LU604_RS26655;product=DUF3277 family protein;protein_id=WP_233481675.1;transl_table=11 NZ_CP089945.1 RefSeq gene 26826 27221 . + . ID=gene-LU604_RS26660;Name=LU604_RS26660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26660;old_locus_tag=LU604_26660 NZ_CP089945.1 Protein Homology CDS 26826 27221 . + 0 ID=cds-WP_233481676.1;Parent=gene-LU604_RS26660;Dbxref=Genbank:WP_233481676.1;Name=WP_233481676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257035.1;locus_tag=LU604_RS26660;product=hypothetical protein;protein_id=WP_233481676.1;transl_table=11 NZ_CP089945.1 RefSeq gene 27236 27385 . + . ID=gene-LU604_RS26665;Name=LU604_RS26665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26665;old_locus_tag=LU604_26665 NZ_CP089945.1 GeneMarkS-2+ CDS 27236 27385 . + 0 ID=cds-WP_233481705.1;Parent=gene-LU604_RS26665;Dbxref=Genbank:WP_233481705.1;Name=WP_233481705.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26665;product=hypothetical protein;protein_id=WP_233481705.1;transl_table=11 NZ_CP089945.1 RefSeq gene 27375 29255 . + . ID=gene-LU604_RS26670;Name=LU604_RS26670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26670;old_locus_tag=LU604_26670 NZ_CP089945.1 Protein Homology CDS 27375 29255 . + 0 ID=cds-WP_233481677.1;Parent=gene-LU604_RS26670;Dbxref=Genbank:WP_233481677.1;Name=WP_233481677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016261354.1;locus_tag=LU604_RS26670;product=hypothetical protein;protein_id=WP_233481677.1;transl_table=11 NZ_CP089945.1 RefSeq gene 29252 30019 . + . ID=gene-LU604_RS26675;Name=LU604_RS26675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26675;old_locus_tag=LU604_26675 NZ_CP089945.1 Protein Homology CDS 29252 30019 . + 0 ID=cds-WP_233481678.1;Parent=gene-LU604_RS26675;Dbxref=Genbank:WP_233481678.1;Name=WP_233481678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257157.1;locus_tag=LU604_RS26675;product=hypothetical protein;protein_id=WP_233481678.1;transl_table=11 NZ_CP089945.1 RefSeq gene 30021 30359 . + . ID=gene-LU604_RS26680;Name=LU604_RS26680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26680;old_locus_tag=LU604_26680 NZ_CP089945.1 Protein Homology CDS 30021 30359 . + 0 ID=cds-WP_233481679.1;Parent=gene-LU604_RS26680;Dbxref=Genbank:WP_233481679.1;Name=WP_233481679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257158.1;locus_tag=LU604_RS26680;product=hypothetical protein;protein_id=WP_233481679.1;transl_table=11 NZ_CP089945.1 RefSeq gene 30334 31191 . + . ID=gene-LU604_RS26685;Name=LU604_RS26685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26685;old_locus_tag=LU604_26685 NZ_CP089945.1 Protein Homology CDS 30334 31191 . + 0 ID=cds-WP_233481680.1;Parent=gene-LU604_RS26685;Dbxref=Genbank:WP_233481680.1;Name=WP_233481680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257159.1;locus_tag=LU604_RS26685;product=hypothetical protein;protein_id=WP_233481680.1;transl_table=11 NZ_CP089945.1 RefSeq gene 31163 31846 . + . ID=gene-LU604_RS26455;Name=LU604_RS26455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26455;old_locus_tag=LU604_26455 NZ_CP089945.1 Protein Homology CDS 31163 31846 . + 0 ID=cds-WP_233481681.1;Parent=gene-LU604_RS26455;Dbxref=Genbank:WP_233481681.1;Name=WP_233481681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257160.1;locus_tag=LU604_RS26455;product=Gp138 family membrane-puncturing spike protein;protein_id=WP_233481681.1;transl_table=11 ##sequence-region NZ_CP089946.1 1 30315 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=65700 NZ_CP089946.1 RefSeq region 1 30315 . + . ID=NZ_CP089946.1:1..30315;Dbxref=taxon:65700;Is_circular=true;Name=pETR004-a;collection-date=2010;country=USA: Maryland;gbkey=Src;genome=plasmid;isolation-source=Infected agricultural plant;mol_type=genomic DNA;nat-host=Cucumis sativus;plasmid-name=pETR004-a;strain=MDCuke NZ_CP089946.1 RefSeq gene 1 864 . + . ID=gene-LU604_RS26690;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=LU604_RS26690;old_locus_tag=LU604_26690 NZ_CP089946.1 Protein Homology CDS 1 864 . + 0 ID=cds-WP_016193194.1;Parent=gene-LU604_RS26690;Dbxref=Genbank:WP_016193194.1;Name=WP_016193194.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002225475.1;locus_tag=LU604_RS26690;product=incFII family plasmid replication initiator RepA;protein_id=WP_016193194.1;transl_table=11 NZ_CP089946.1 RefSeq gene 2028 2678 . + . ID=gene-LU604_RS26695;Name=LU604_RS26695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26695;old_locus_tag=LU604_26695 NZ_CP089946.1 Protein Homology CDS 2028 2678 . + 0 ID=cds-WP_016193196.1;Parent=gene-LU604_RS26695;Dbxref=Genbank:WP_016193196.1;Name=WP_016193196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012592917.1;locus_tag=LU604_RS26695;product=AAA family ATPase;protein_id=WP_016193196.1;transl_table=11 NZ_CP089946.1 RefSeq gene 2718 2999 . + . ID=gene-LU604_RS26700;Name=LU604_RS26700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26700;old_locus_tag=LU604_26700 NZ_CP089946.1 Protein Homology CDS 2718 2999 . + 0 ID=cds-WP_016193197.1;Parent=gene-LU604_RS26700;Dbxref=Genbank:WP_016193197.1;Name=WP_016193197.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013561.2;locus_tag=LU604_RS26700;product=ribbon-helix-helix domain-containing protein;protein_id=WP_016193197.1;transl_table=11 NZ_CP089946.1 RefSeq gene 3416 4630 . - . ID=gene-LU604_RS26705;Name=LU604_RS26705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26705;old_locus_tag=LU604_26705 NZ_CP089946.1 Protein Homology CDS 3416 4630 . - 0 ID=cds-WP_046371879.1;Parent=gene-LU604_RS26705;Dbxref=Genbank:WP_046371879.1;Name=WP_046371879.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144477.1;locus_tag=LU604_RS26705;product=IS91 family transposase;protein_id=WP_046371879.1;transl_table=11 NZ_CP089946.1 RefSeq gene 4639 4767 . - . ID=gene-LU604_RS27170;Name=LU604_RS27170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27170 NZ_CP089946.1 GeneMarkS-2+ CDS 4639 4767 . - 0 ID=cds-WP_256371787.1;Parent=gene-LU604_RS27170;Dbxref=Genbank:WP_256371787.1;Name=WP_256371787.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS27170;product=hypothetical protein;protein_id=WP_256371787.1;transl_table=11 NZ_CP089946.1 RefSeq gene 5343 8054 . + . ID=gene-LU604_RS26710;Name=LU604_RS26710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26710;old_locus_tag=LU604_26710 NZ_CP089946.1 GeneMarkS-2+ CDS 5343 8054 . + 0 ID=cds-WP_016193170.1;Parent=gene-LU604_RS26710;Dbxref=Genbank:WP_016193170.1;Name=WP_016193170.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26710;product=hypothetical protein;protein_id=WP_016193170.1;transl_table=11 NZ_CP089946.1 RefSeq gene 8784 9044 . + . ID=gene-LU604_RS26715;Name=LU604_RS26715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26715;old_locus_tag=LU604_26715 NZ_CP089946.1 Protein Homology CDS 8784 9044 . + 0 ID=cds-WP_016193173.1;Parent=gene-LU604_RS26715;Dbxref=Genbank:WP_016193173.1;Name=WP_016193173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000510385.1;locus_tag=LU604_RS26715;product=hypothetical protein;protein_id=WP_016193173.1;transl_table=11 NZ_CP089946.1 RefSeq gene 9331 9567 . + . ID=gene-LU604_RS26720;Name=LU604_RS26720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26720;old_locus_tag=LU604_26720 NZ_CP089946.1 Protein Homology CDS 9331 9567 . + 0 ID=cds-WP_016193174.1;Parent=gene-LU604_RS26720;Dbxref=Genbank:WP_016193174.1;Name=WP_016193174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001361845.1;locus_tag=LU604_RS26720;product=hypothetical protein;protein_id=WP_016193174.1;transl_table=11 NZ_CP089946.1 RefSeq gene 9726 10766 . + . ID=gene-LU604_RS26725;Name=LU604_RS26725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26725;old_locus_tag=LU604_26725 NZ_CP089946.1 Protein Homology CDS 9726 10766 . + 0 ID=cds-WP_046372128.1;Parent=gene-LU604_RS26725;Dbxref=Genbank:WP_046372128.1;Name=WP_046372128.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=LU604_RS26725;product=IS481 family transposase;protein_id=WP_046372128.1;transl_table=11 NZ_CP089946.1 RefSeq gene 10962 11609 . - . ID=gene-LU604_RS26730;Name=LU604_RS26730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26730;old_locus_tag=LU604_26730 NZ_CP089946.1 Protein Homology CDS 10962 11609 . - 0 ID=cds-WP_015256836.1;Parent=gene-LU604_RS26730;Dbxref=Genbank:WP_015256836.1;Name=WP_015256836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549893.1;locus_tag=LU604_RS26730;product=recombinase family protein;protein_id=WP_015256836.1;transl_table=11 NZ_CP089946.1 RefSeq pseudogene 11843 12163 . + . ID=gene-LU604_RS26735;Name=LU604_RS26735;end_range=12163,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS26735;old_locus_tag=LU604_26735;partial=true;pseudo=true NZ_CP089946.1 Protein Homology CDS 11843 12163 . + 0 ID=cds-LU604_RS26735;Parent=gene-LU604_RS26735;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=12163,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026082.1;locus_tag=LU604_RS26735;partial=true;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 NZ_CP089946.1 RefSeq gene 12176 12532 . + . ID=gene-LU604_RS26740;Name=LU604_RS26740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26740;old_locus_tag=LU604_26740 NZ_CP089946.1 Protein Homology CDS 12176 12532 . + 0 ID=cds-WP_006122339.1-2;Parent=gene-LU604_RS26740;Dbxref=Genbank:WP_006122339.1;Name=WP_006122339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000127484.1;locus_tag=LU604_RS26740;product=hypothetical protein;protein_id=WP_006122339.1;transl_table=11 NZ_CP089946.1 RefSeq gene 13315 13653 . + . ID=gene-LU604_RS26745;Name=LU604_RS26745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26745;old_locus_tag=LU604_26745 NZ_CP089946.1 GeneMarkS-2+ CDS 13315 13653 . + 0 ID=cds-WP_016193175.1;Parent=gene-LU604_RS26745;Dbxref=Genbank:WP_016193175.1;Name=WP_016193175.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26745;product=hypothetical protein;protein_id=WP_016193175.1;transl_table=11 NZ_CP089946.1 RefSeq gene 13894 14454 . + . ID=gene-LU604_RS26750;Name=LU604_RS26750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26750;old_locus_tag=LU604_26750 NZ_CP089946.1 Protein Homology CDS 13894 14454 . + 0 ID=cds-WP_016193176.1;Parent=gene-LU604_RS26750;Dbxref=Genbank:WP_016193176.1;Name=WP_016193176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490535.1;locus_tag=LU604_RS26750;product=recombinase family protein;protein_id=WP_016193176.1;transl_table=11 NZ_CP089946.1 RefSeq gene 14438 16102 . + . ID=gene-LU604_RS26755;Name=LU604_RS26755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26755;old_locus_tag=LU604_26755 NZ_CP089946.1 Protein Homology CDS 14438 16102 . + 0 ID=cds-WP_016193177.1;Parent=gene-LU604_RS26755;Dbxref=Genbank:WP_016193177.1;Name=WP_016193177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490534.1;locus_tag=LU604_RS26755;product=IS481 family transposase;protein_id=WP_016193177.1;transl_table=11 NZ_CP089946.1 RefSeq gene 16035 17060 . + . ID=gene-LU604_RS26760;Name=LU604_RS26760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26760;old_locus_tag=LU604_26760 NZ_CP089946.1 Protein Homology CDS 16035 17060 . + 0 ID=cds-WP_087949743.1;Parent=gene-LU604_RS26760;Dbxref=Genbank:WP_087949743.1;Name=WP_087949743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490533.1;locus_tag=LU604_RS26760;product=ExeA family protein;protein_id=WP_087949743.1;transl_table=11 NZ_CP089946.1 RefSeq gene 17198 17500 . + . ID=gene-LU604_RS26765;Name=LU604_RS26765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26765;old_locus_tag=LU604_26765 NZ_CP089946.1 Protein Homology CDS 17198 17500 . + 0 ID=cds-WP_016193179.1;Parent=gene-LU604_RS26765;Dbxref=Genbank:WP_016193179.1;Name=WP_016193179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322723.1;locus_tag=LU604_RS26765;product=hypothetical protein;protein_id=WP_016193179.1;transl_table=11 NZ_CP089946.1 RefSeq gene 17552 17746 . + . ID=gene-LU604_RS26770;Name=LU604_RS26770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26770;old_locus_tag=LU604_26770 NZ_CP089946.1 Protein Homology CDS 17552 17746 . + 0 ID=cds-WP_016193180.1;Parent=gene-LU604_RS26770;Dbxref=Genbank:WP_016193180.1;Name=WP_016193180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122357.1;locus_tag=LU604_RS26770;product=hypothetical protein;protein_id=WP_016193180.1;transl_table=11 NZ_CP089946.1 RefSeq gene 17815 17949 . + . ID=gene-LU604_RS27175;Name=LU604_RS27175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS27175 NZ_CP089946.1 Protein Homology CDS 17815 17949 . + 0 ID=cds-WP_256371786.1;Parent=gene-LU604_RS27175;Dbxref=Genbank:WP_256371786.1;Name=WP_256371786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000107566.1;locus_tag=LU604_RS27175;product=hypothetical protein;protein_id=WP_256371786.1;transl_table=11 NZ_CP089946.1 RefSeq gene 18452 18859 . + . ID=gene-LU604_RS26775;Name=LU604_RS26775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26775;old_locus_tag=LU604_26775 NZ_CP089946.1 Protein Homology CDS 18452 18859 . + 0 ID=cds-WP_016193182.1;Parent=gene-LU604_RS26775;Dbxref=Genbank:WP_016193182.1;Name=WP_016193182.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017105.2;locus_tag=LU604_RS26775;product=relaxosome protein TraM;protein_id=WP_016193182.1;transl_table=11 NZ_CP089946.1 RefSeq gene 19010 20218 . - . ID=gene-LU604_RS26780;Name=LU604_RS26780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26780;old_locus_tag=LU604_26780 NZ_CP089946.1 Protein Homology CDS 19010 20218 . - 0 ID=cds-WP_046371917.1;Parent=gene-LU604_RS26780;Dbxref=Genbank:WP_046371917.1;Name=WP_046371917.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=LU604_RS26780;product=IS256 family transposase;protein_id=WP_046371917.1;transl_table=11 NZ_CP089946.1 RefSeq gene 20411 20878 . + . ID=gene-LU604_RS26785;Name=LU604_RS26785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26785;old_locus_tag=LU604_26785 NZ_CP089946.1 Protein Homology CDS 20411 20878 . + 0 ID=cds-WP_016193183.1;Parent=gene-LU604_RS26785;Dbxref=Genbank:WP_016193183.1;Name=WP_016193183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004131847.1;locus_tag=LU604_RS26785;product=lytic transglycosylase domain-containing protein;protein_id=WP_016193183.1;transl_table=11 NZ_CP089946.1 RefSeq gene 20900 23047 . + . ID=gene-LU604_RS26790;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=LU604_RS26790;old_locus_tag=LU604_26790 NZ_CP089946.1 Protein Homology CDS 20900 23047 . + 0 ID=cds-WP_016193184.1;Parent=gene-LU604_RS26790;Dbxref=Genbank:WP_016193184.1;Name=WP_016193184.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001568075.1;locus_tag=LU604_RS26790;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_016193184.1;transl_table=11 NZ_CP089946.1 RefSeq gene 23047 28272 . + . ID=gene-LU604_RS26795;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=LU604_RS26795;old_locus_tag=LU604_26795 NZ_CP089946.1 Protein Homology CDS 23047 28272 . + 0 ID=cds-WP_233481706.1;Parent=gene-LU604_RS26795;Dbxref=Genbank:WP_233481706.1;Name=WP_233481706.1;gbkey=CDS;gene=traI;inference=COORDINATES: protein motif:HMM:TIGR02760.1;locus_tag=LU604_RS26795;product=conjugative transfer relaxase/helicase TraI;protein_id=WP_233481706.1;transl_table=11 NZ_CP089946.1 RefSeq gene 28282 28887 . - . ID=gene-LU604_RS26800;Name=LU604_RS26800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26800;old_locus_tag=LU604_26800 NZ_CP089946.1 Protein Homology CDS 28282 28887 . - 0 ID=cds-WP_016193191.1;Parent=gene-LU604_RS26800;Dbxref=Genbank:WP_016193191.1;Name=WP_016193191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016193191.1;locus_tag=LU604_RS26800;product=DUF2913 family protein;protein_id=WP_016193191.1;transl_table=11 NZ_CP089946.1 RefSeq gene 29054 29617 . + . ID=gene-LU604_RS26805;Name=LU604_RS26805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26805;old_locus_tag=LU604_26805 NZ_CP089946.1 Protein Homology CDS 29054 29617 . + 0 ID=cds-WP_040465936.1;Parent=gene-LU604_RS26805;Dbxref=Genbank:WP_040465936.1;Name=WP_040465936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008324931.1;locus_tag=LU604_RS26805;product=phospholipase D family protein;protein_id=WP_040465936.1;transl_table=11 NZ_CP089946.1 RefSeq gene 29764 30009 . + . ID=gene-LU604_RS26810;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=LU604_RS26810;old_locus_tag=LU604_26810 NZ_CP089946.1 Protein Homology CDS 29764 30009 . + 0 ID=cds-WP_016193193.1;Parent=gene-LU604_RS26810;Dbxref=Genbank:WP_016193193.1;Name=WP_016193193.1;gbkey=CDS;gene=repA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001485405.1;locus_tag=LU604_RS26810;product=replication regulatory protein RepA;protein_id=WP_016193193.1;transl_table=11 ##sequence-region NZ_CP089947.1 1 6938 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=65700 NZ_CP089947.1 RefSeq region 1 6938 . + . ID=NZ_CP089947.1:1..6938;Dbxref=taxon:65700;Is_circular=true;Name=pETR005-a;collection-date=2010;country=USA: Maryland;gbkey=Src;genome=plasmid;isolation-source=Infected agricultural plant;mol_type=genomic DNA;nat-host=Cucumis sativus;plasmid-name=pETR005-a;strain=MDCuke NZ_CP089947.1 RefSeq gene 170 502 . + . ID=gene-LU604_RS26815;Name=LU604_RS26815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26815;old_locus_tag=LU604_26815 NZ_CP089947.1 Protein Homology CDS 170 502 . + 0 ID=cds-WP_233481065.1;Parent=gene-LU604_RS26815;Dbxref=Genbank:WP_233481065.1;Name=WP_233481065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015873600.1;locus_tag=LU604_RS26815;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_233481065.1;transl_table=11 NZ_CP089947.1 RefSeq gene 504 788 . + . ID=gene-LU604_RS26820;Name=nadS;gbkey=Gene;gene=nadS;gene_biotype=protein_coding;locus_tag=LU604_RS26820;old_locus_tag=LU604_26820 NZ_CP089947.1 Protein Homology CDS 504 788 . + 0 ID=cds-WP_001697687.1;Parent=gene-LU604_RS26820;Dbxref=Genbank:WP_001697687.1;Name=WP_001697687.1;gbkey=CDS;gene=nadS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007431.1;locus_tag=LU604_RS26820;product=NadS family protein;protein_id=WP_001697687.1;transl_table=11 NZ_CP089947.1 RefSeq gene 982 1905 . + . ID=gene-LU604_RS26825;Name=LU604_RS26825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26825;old_locus_tag=LU604_26825 NZ_CP089947.1 Protein Homology CDS 982 1905 . + 0 ID=cds-WP_233481708.1;Parent=gene-LU604_RS26825;Dbxref=Genbank:WP_233481708.1;Name=WP_233481708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006674370.1;locus_tag=LU604_RS26825;product=replication initiation protein;protein_id=WP_233481708.1;transl_table=11 NZ_CP089947.1 RefSeq gene 1895 3673 . + . ID=gene-LU604_RS26830;Name=LU604_RS26830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26830;old_locus_tag=LU604_26830 NZ_CP089947.1 Protein Homology CDS 1895 3673 . + 0 ID=cds-WP_233481709.1;Parent=gene-LU604_RS26830;Dbxref=Genbank:WP_233481709.1;Name=WP_233481709.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF016724.2;locus_tag=LU604_RS26830;product=DEAD/DEAH box helicase family protein;protein_id=WP_233481709.1;transl_table=11 NZ_CP089947.1 RefSeq gene 3666 3899 . + . ID=gene-LU604_RS26835;Name=LU604_RS26835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26835;old_locus_tag=LU604_26835 NZ_CP089947.1 GeneMarkS-2+ CDS 3666 3899 . + 0 ID=cds-WP_023207131.1;Parent=gene-LU604_RS26835;Dbxref=Genbank:WP_023207131.1;Name=WP_023207131.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LU604_RS26835;product=hypothetical protein;protein_id=WP_023207131.1;transl_table=11 NZ_CP089947.1 RefSeq gene 4132 4458 . + . ID=gene-LU604_RS26840;Name=mobC;gbkey=Gene;gene=mobC;gene_biotype=protein_coding;locus_tag=LU604_RS26840;old_locus_tag=LU604_26840 NZ_CP089947.1 Protein Homology CDS 4132 4458 . + 0 ID=cds-WP_233481707.1;Parent=gene-LU604_RS26840;Dbxref=Genbank:WP_233481707.1;Name=WP_233481707.1;gbkey=CDS;gene=mobC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006674374.1;locus_tag=LU604_RS26840;product=plasmid mobilization relaxosome protein MobC;protein_id=WP_233481707.1;transl_table=11 NZ_CP089947.1 RefSeq pseudogene 4667 5089 . + . ID=gene-LU604_RS26845;Name=LU604_RS26845;end_range=5089,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LU604_RS26845;old_locus_tag=LU604_26845;partial=true;pseudo=true NZ_CP089947.1 Protein Homology CDS 4667 5089 . + 0 ID=cds-LU604_RS26845;Parent=gene-LU604_RS26845;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=5089,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015397.2;locus_tag=LU604_RS26845;partial=true;product=relaxase/mobilization nuclease domain-containing protein;pseudo=true;transl_table=11 NZ_CP089947.1 RefSeq gene 5136 5621 . + . ID=gene-LU604_RS26850;Name=LU604_RS26850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26850;old_locus_tag=LU604_26850 NZ_CP089947.1 Protein Homology CDS 5136 5621 . + 0 ID=cds-WP_233481064.1;Parent=gene-LU604_RS26850;Dbxref=Genbank:WP_233481064.1;Name=WP_233481064.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016710.2;locus_tag=LU604_RS26850;product=MbeB family mobilization protein;protein_id=WP_233481064.1;transl_table=11 NZ_CP089947.1 RefSeq gene 5691 5915 . + . ID=gene-LU604_RS26855;Name=LU604_RS26855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26855;old_locus_tag=LU604_26855 NZ_CP089947.1 Protein Homology CDS 5691 5915 . + 0 ID=cds-WP_029498753.1;Parent=gene-LU604_RS26855;Dbxref=Genbank:WP_029498753.1;Name=WP_029498753.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016769.2;locus_tag=LU604_RS26855;product=MbeD family mobilization/exclusion protein;protein_id=WP_029498753.1;transl_table=11 NZ_CP089947.1 RefSeq gene 6149 6799 . + . ID=gene-LU604_RS26860;Name=LU604_RS26860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LU604_RS26860;old_locus_tag=LU604_26860 NZ_CP089947.1 Protein Homology CDS 6149 6799 . + 0 ID=cds-WP_233481710.1;Parent=gene-LU604_RS26860;Dbxref=Genbank:WP_233481710.1;Name=WP_233481710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442912.1;locus_tag=LU604_RS26860;product=hypothetical protein;protein_id=WP_233481710.1;transl_table=11 ###