locus-tag class description AB984_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix AB984_RS00005 PF00308 Bacterial dnaA protein AB984_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AB984_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AB984_RS00010 PF02767 DNA polymerase III beta subunit, central domain AB984_RS00015 PF00455 DeoR C terminal sensor domain AB984_RS00015 PF08220 DeoR-like helix-turn-helix domain AB984_RS00020 PF00294 pfkB family carbohydrate kinase AB984_RS00025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AB984_RS00025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AB984_RS00035 PF02463 RecF/RecN/SMC N terminal domain AB984_RS00040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB984_RS00040 PF01751 Toprim domain AB984_RS00040 PF00204 DNA gyrase B AB984_RS00040 PF00986 DNA gyrase B subunit, carboxyl terminus AB984_RS00045 PF00521 DNA gyrase/topoisomerase IV, subunit A AB984_RS00045 PF03989 DNA gyrase C-terminal domain, beta-propeller AB984_RS00050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AB984_RS00050 PF02403 Seryl-tRNA synthetase N-terminal domain AB984_RS00065 PF14437 MafB19-like deaminase AB984_RS00075 PF12169 DNA polymerase III subunits gamma and tau domain III AB984_RS00080 PF13662 Toprim domain AB984_RS00080 PF02132 RecR protein AB984_RS00095 PF01513 ATP-NAD kinase AB984_RS00100 PF01098 Cell cycle protein AB984_RS00110 PF05192 MutS domain III AB984_RS00110 PF00488 MutS domain V AB984_RS00110 PF05190 MutS family domain IV AB984_RS00110 PF05188 MutS domain II AB984_RS00110 PF01624 MutS domain I AB984_RS00115 PF01119 DNA mismatch repair protein, C-terminal domain AB984_RS00115 PF08676 MutL C terminal dimerisation domain AB984_RS00125 PF08402 TOBE domain AB984_RS00125 PF00005 ABC transporter AB984_RS00135 PF00005 ABC transporter AB984_RS00140 PF02645 Uncharacterised protein, DegV family COG1307 AB984_RS00145 PF02645 Uncharacterised protein, DegV family COG1307 AB984_RS00150 PF01205 Uncharacterized protein family UPF0029 AB984_RS00150 PF09186 Domain of unknown function (DUF1949) AB984_RS00160 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AB984_RS00165 PF01545 Cation efflux family AB984_RS00165 PF16916 Dimerisation domain of Zinc Transporter AB984_RS00185 PF00156 Phosphoribosyl transferase domain AB984_RS00190 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AB984_RS00195 PF00156 Phosphoribosyl transferase domain AB984_RS00220 PF01297 Zinc-uptake complex component A periplasmic AB984_RS00225 PF00005 ABC transporter AB984_RS00230 PF00950 ABC 3 transport family AB984_RS00235 PF00950 ABC 3 transport family AB984_RS00240 PF01569 PAP2 superfamily AB984_RS00250 PF13419 Haloacid dehalogenase-like hydrolase AB984_RS00275 PF01472 PUA domain AB984_RS00275 PF00696 Amino acid kinase family AB984_RS00280 PF00171 Aldehyde dehydrogenase family AB984_RS00285 PF00884 Sulfatase AB984_RS00290 PF03807 NADP oxidoreductase coenzyme F420-dependent AB984_RS00290 PF14748 Pyrroline-5-carboxylate reductase dimerisation AB984_RS00300 PF07676 WD40-like Beta Propeller Repeat AB984_RS00300 PF00326 Prolyl oligopeptidase family AB984_RS00310 PF04607 Region found in RelA / SpoT proteins AB984_RS00315 PF01521 Iron-sulphur cluster biosynthesis AB984_RS00325 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AB984_RS00325 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AB984_RS00335 PF01244 Membrane dipeptidase (Peptidase family M19) AB984_RS00345 PF01168 Alanine racemase, N-terminal domain AB984_RS00345 PF00842 Alanine racemase, C-terminal domain AB984_RS00355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AB984_RS00355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AB984_RS00360 PF02646 RmuC family AB984_RS00365 PF01734 Patatin-like phospholipase AB984_RS00370 PF00248 Aldo/keto reductase family AB984_RS00410 PF00860 Permease family AB984_RS00415 PF00633 Helix-hairpin-helix motif AB984_RS00415 PF14815 NUDIX domain AB984_RS00415 PF00730 HhH-GPD superfamily base excision DNA repair protein AB984_RS00425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AB984_RS00430 PF01047 MarR family AB984_RS00440 PF01613 Flavin reductase like domain AB984_RS00445 PF00368 Hydroxymethylglutaryl-coenzyme A reductase AB984_RS00450 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AB984_RS00450 PF00056 lactate/malate dehydrogenase, NAD binding domain AB984_RS00455 PF03144 Elongation factor Tu domain 2 AB984_RS00455 PF00009 Elongation factor Tu GTP binding domain AB984_RS00455 PF00679 Elongation factor G C-terminus AB984_RS00460 PF01702 Queuine tRNA-ribosyltransferase AB984_RS00465 PF02547 Queuosine biosynthesis protein AB984_RS00480 PF08032 RNA 2'-O ribose methyltransferase substrate binding AB984_RS00480 PF00588 SpoU rRNA Methylase family AB984_RS00485 PF02540 NAD synthase AB984_RS00485 PF00795 Carbon-nitrogen hydrolase AB984_RS00495 PF00005 ABC transporter AB984_RS00495 PF00664 ABC transporter transmembrane region AB984_RS00500 PF00664 ABC transporter transmembrane region AB984_RS00500 PF00005 ABC transporter AB984_RS00505 PF01106 NifU-like domain AB984_RS00515 PF00342 Phosphoglucose isomerase AB984_RS00520 PF01625 Peptide methionine sulfoxide reductase AB984_RS00540 PF04055 Radical SAM superfamily AB984_RS00545 PF03477 ATP cone domain AB984_RS00545 PF13597 Anaerobic ribonucleoside-triphosphate reductase AB984_RS00550 PF13443 Cro/C1-type HTH DNA-binding domain AB984_RS00555 PF03840 Preprotein translocase SecG subunit AB984_RS00560 PF00575 S1 RNA binding domain AB984_RS00560 PF00773 RNB domain AB984_RS00560 PF08206 Ribonuclease B OB domain AB984_RS00560 PF17876 Cold shock domain AB984_RS00565 PF01668 SmpB protein AB984_RS00570 PF04011 LemA family AB984_RS00580 PF00005 ABC transporter AB984_RS00580 PF00664 ABC transporter transmembrane region AB984_RS00585 PF00664 ABC transporter transmembrane region AB984_RS00585 PF00005 ABC transporter AB984_RS00590 PF02457 DisA bacterial checkpoint controller nucleotide-binding AB984_RS00600 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AB984_RS00600 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AB984_RS00600 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AB984_RS00600 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AB984_RS00605 PF00486 Transcriptional regulatory protein, C terminal AB984_RS00605 PF00072 Response regulator receiver domain AB984_RS00610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB984_RS00610 PF00672 HAMP domain AB984_RS00610 PF00512 His Kinase A (phospho-acceptor) domain AB984_RS00620 PF02545 Maf-like protein AB984_RS00630 PF12822 ECF transporter, substrate-specific component AB984_RS00635 PF03309 Type III pantothenate kinase AB984_RS00640 PF02441 Flavoprotein AB984_RS00650 PF17922 Tetracyclin repressor-like, C-terminal domain AB984_RS00650 PF00440 Bacterial regulatory proteins, tetR family AB984_RS00685 PF03611 PTS system sugar-specific permease component AB984_RS00695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AB984_RS00700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AB984_RS00700 PF00874 PRD domain AB984_RS00700 PF05043 Mga helix-turn-helix domain AB984_RS00700 PF08279 HTH domain AB984_RS00710 PF02558 Ketopantoate reductase PanE/ApbA AB984_RS00710 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain AB984_RS00725 PF00466 Ribosomal protein L10 AB984_RS00730 PF16320 Ribosomal protein L7/L12 dimerisation domain AB984_RS00730 PF00542 Ribosomal protein L7/L12 C-terminal domain AB984_RS00735 PF08468 Methyltransferase small domain N-terminal AB984_RS00735 PF05175 Methyltransferase small domain AB984_RS00740 PF10385 RNA polymerase beta subunit external 1 domain AB984_RS00740 PF00562 RNA polymerase Rpb2, domain 6 AB984_RS00740 PF04560 RNA polymerase Rpb2, domain 7 AB984_RS00740 PF04563 RNA polymerase beta subunit AB984_RS00740 PF04561 RNA polymerase Rpb2, domain 2 AB984_RS00740 PF04565 RNA polymerase Rpb2, domain 3 AB984_RS00745 PF04983 RNA polymerase Rpb1, domain 3 AB984_RS00745 PF00623 RNA polymerase Rpb1, domain 2 AB984_RS00745 PF04997 RNA polymerase Rpb1, domain 1 AB984_RS00745 PF05000 RNA polymerase Rpb1, domain 4 AB984_RS00745 PF04998 RNA polymerase Rpb1, domain 5 AB984_RS00750 PF00459 Inositol monophosphatase family AB984_RS00755 PF00459 Inositol monophosphatase family AB984_RS00760 PF12146 Serine aminopeptidase, S33 AB984_RS00765 PF12833 Helix-turn-helix domain AB984_RS00770 PF02278 Polysaccharide lyase family 8, super-sandwich domain AB984_RS00770 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain AB984_RS00770 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain AB984_RS00775 PF02557 D-alanyl-D-alanine carboxypeptidase AB984_RS00780 PF00881 Nitroreductase family AB984_RS00785 PF01323 DSBA-like thioredoxin domain AB984_RS00795 PF01554 MatE AB984_RS00800 PF04205 FMN-binding domain AB984_RS00800 PF00890 FAD binding domain AB984_RS00800 PF03358 NADPH-dependent FMN reductase AB984_RS00805 PF00534 Glycosyl transferases group 1 AB984_RS00805 PF13439 Glycosyltransferase Family 4 AB984_RS00830 PF08534 Redoxin AB984_RS00835 PF05958 tRNA (Uracil-5-)-methyltransferase AB984_RS00835 PF01938 TRAM domain AB984_RS00840 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB984_RS00840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB984_RS00845 PF12708 Pectate lyase superfamily protein AB984_RS00845 PF13229 Right handed beta helix region AB984_RS00865 PF03009 Glycerophosphoryl diester phosphodiesterase family AB984_RS00870 PF03965 Penicillinase repressor AB984_RS00875 PF13936 Helix-turn-helix domain AB984_RS00890 PF00440 Bacterial regulatory proteins, tetR family AB984_RS00895 PF10417 C-terminal domain of 1-Cys peroxiredoxin AB984_RS00895 PF00578 AhpC/TSA family AB984_RS00905 PF01209 ubiE/COQ5 methyltransferase family AB984_RS00920 PF13603 Leucyl-tRNA synthetase, Domain 2 AB984_RS00920 PF08264 Anticodon-binding domain of tRNA AB984_RS00920 PF00133 tRNA synthetases class I (I, L, M and V) AB984_RS00920 PF09334 tRNA synthetases class I (M) AB984_RS00935 PF00437 Type II/IV secretion system protein AB984_RS00960 PF03309 Type III pantothenate kinase AB984_RS00980 PF01451 Low molecular weight phosphotyrosine protein phosphatase AB984_RS00985 PF04172 LrgB-like family AB984_RS00990 PF03788 LrgA family AB984_RS01010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AB984_RS01010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AB984_RS01045 PF01515 Phosphate acetyl/butaryl transferase AB984_RS01050 PF13556 PucR C-terminal helix-turn-helix domain AB984_RS01055 PF00005 ABC transporter AB984_RS01055 PF17912 MalK OB fold domain AB984_RS01055 PF03459 TOBE domain AB984_RS01070 PF12733 Cadherin-like beta sandwich domain AB984_RS01070 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) AB984_RS01075 PF13732 Domain of unknown function (DUF4162) AB984_RS01075 PF00005 ABC transporter AB984_RS01095 PF00550 Phosphopantetheine attachment site AB984_RS01095 PF00501 AMP-binding enzyme AB984_RS01095 PF13193 AMP-binding enzyme C-terminal domain AB984_RS01095 PF00668 Condensation domain AB984_RS01100 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AB984_RS01100 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AB984_RS01110 PF03062 MBOAT, membrane-bound O-acyltransferase family AB984_RS01120 PF00072 Response regulator receiver domain AB984_RS01120 PF00486 Transcriptional regulatory protein, C terminal AB984_RS01125 PF00512 His Kinase A (phospho-acceptor) domain AB984_RS01140 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family AB984_RS01155 PF00480 ROK family AB984_RS01160 PF02378 Phosphotransferase system, EIIC AB984_RS01170 PF00722 Glycosyl hydrolases family 16 AB984_RS01175 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AB984_RS01175 PF02378 Phosphotransferase system, EIIC AB984_RS01175 PF00367 phosphotransferase system, EIIB AB984_RS01185 PF07501 G5 domain AB984_RS01185 PF00728 Glycosyl hydrolase family 20, catalytic domain AB984_RS01185 PF00746 LPXTG cell wall anchor motif AB984_RS01185 PF04650 YSIRK type signal peptide AB984_RS01190 PF00528 Binding-protein-dependent transport system inner membrane component AB984_RS01195 PF00528 Binding-protein-dependent transport system inner membrane component AB984_RS01200 PF12010 Domain of unknown function (DUF3502) AB984_RS01210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB984_RS01210 PF00672 HAMP domain AB984_RS01210 PF02743 Cache domain AB984_RS01210 PF06580 Histidine kinase AB984_RS01215 PF12833 Helix-turn-helix domain AB984_RS01215 PF00072 Response regulator receiver domain AB984_RS01230 PF00392 Bacterial regulatory proteins, gntR family AB984_RS01240 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 AB984_RS01240 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain AB984_RS01240 PF09261 Alpha mannosidase middle domain AB984_RS01240 PF01074 Glycosyl hydrolases family 38 N-terminal domain AB984_RS01240 PF07748 Glycosyl hydrolases family 38 C-terminal domain AB984_RS01245 PF00232 Glycosyl hydrolase family 1 AB984_RS01250 PF00480 ROK family AB984_RS01255 PF00480 ROK family AB984_RS01255 PF01047 MarR family AB984_RS01260 PF01238 Phosphomannose isomerase type I AB984_RS01265 PF00300 Histidine phosphatase superfamily (branch 1) AB984_RS01290 PF13276 HTH-like domain AB984_RS01290 PF00665 Integrase core domain AB984_RS01290 PF13333 Integrase core domain AB984_RS01315 PF13936 Helix-turn-helix domain AB984_RS01320 PF00557 Metallopeptidase family M24 AB984_RS01325 PF03123 CAT RNA binding domain AB984_RS01325 PF00874 PRD domain AB984_RS01330 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AB984_RS01335 PF02378 Phosphotransferase system, EIIC AB984_RS01335 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AB984_RS01335 PF00367 phosphotransferase system, EIIB AB984_RS01340 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AB984_RS01340 PF02378 Phosphotransferase system, EIIC AB984_RS01340 PF00367 phosphotransferase system, EIIB AB984_RS01355 PF00313 'Cold-shock' DNA-binding domain AB984_RS01360 PF06280 Fn3-like domain AB984_RS01360 PF00746 LPXTG cell wall anchor motif AB984_RS01360 PF02225 PA domain AB984_RS01360 PF00082 Subtilase family AB984_RS01365 PF02673 Bacitracin resistance protein BacA AB984_RS01375 PF01872 RibD C-terminal domain AB984_RS01395 PF00072 Response regulator receiver domain AB984_RS01395 PF00196 Bacterial regulatory proteins, luxR family AB984_RS01420 PF00860 Permease family AB984_RS01425 PF08013 Tagatose 6 phosphate kinase AB984_RS01450 PF03613 PTS system mannose/fructose/sorbose family IID component AB984_RS01455 PF03609 PTS system sorbose-specific iic component AB984_RS01460 PF03830 PTS system sorbose subfamily IIB component AB984_RS01465 PF12833 Helix-turn-helix domain AB984_RS01465 PF17853 GGDEF-like domain AB984_RS01475 PF01380 SIS domain AB984_RS01510 PF00528 Binding-protein-dependent transport system inner membrane component AB984_RS01515 PF09084 NMT1/THI5 like AB984_RS01520 PF00005 ABC transporter AB984_RS01525 PF01926 50S ribosome-binding GTPase AB984_RS01525 PF13167 GTP-binding GTPase N-terminal AB984_RS01525 PF16360 GTP-binding GTPase Middle Region AB984_RS01530 PF00270 DEAD/DEAH box helicase AB984_RS01530 PF00271 Helicase conserved C-terminal domain AB984_RS01530 PF03880 DbpA RNA binding domain AB984_RS01535 PF13088 BNR repeat-like domain AB984_RS01535 PF02973 Sialidase, N-terminal domain AB984_RS01535 PF04650 YSIRK type signal peptide AB984_RS01540 PF04055 Radical SAM superfamily AB984_RS01540 PF16199 Radical_SAM C-terminal domain AB984_RS01550 PF01479 S4 domain AB984_RS01550 PF00849 RNA pseudouridylate synthase AB984_RS01560 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB984_RS01560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB984_RS01570 PF03023 Lipid II flippase MurJ AB984_RS01580 PF01641 SelR domain AB984_RS01585 PF00486 Transcriptional regulatory protein, C terminal AB984_RS01585 PF00072 Response regulator receiver domain AB984_RS01590 PF00989 PAS fold AB984_RS01590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB984_RS01590 PF00672 HAMP domain AB984_RS01590 PF00512 His Kinase A (phospho-acceptor) domain AB984_RS01600 PF00486 Transcriptional regulatory protein, C terminal AB984_RS01600 PF00072 Response regulator receiver domain AB984_RS01605 PF00512 His Kinase A (phospho-acceptor) domain AB984_RS01610 PF03601 Conserved hypothetical protein 698 AB984_RS01615 PF03466 LysR substrate binding domain AB984_RS01615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB984_RS01620 PF05525 Branched-chain amino acid transport protein AB984_RS01640 PF00392 Bacterial regulatory proteins, gntR family AB984_RS01640 PF07702 UTRA domain AB984_RS01650 PF00005 ABC transporter AB984_RS01655 PF00005 ABC transporter AB984_RS01665 PF01479 S4 domain AB984_RS01665 PF00849 RNA pseudouridylate synthase AB984_RS01670 PF00313 'Cold-shock' DNA-binding domain AB984_RS01695 PF13091 PLD-like domain AB984_RS01705 PF01479 S4 domain AB984_RS01705 PF00849 RNA pseudouridylate synthase AB984_RS01710 PF10672 S-adenosylmethionine-dependent methyltransferase AB984_RS01710 PF02926 THUMP domain AB984_RS01710 PF01170 Putative RNA methylase family UPF0020 AB984_RS01715 PF00580 UvrD/REP helicase N-terminal domain AB984_RS01715 PF13361 UvrD-like helicase C-terminal domain AB984_RS01720 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AB984_RS01720 PF12826 Helix-hairpin-helix motif AB984_RS01720 PF01653 NAD-dependent DNA ligase adenylation domain AB984_RS01720 PF03120 NAD-dependent DNA ligase OB-fold domain AB984_RS01720 PF00533 BRCA1 C Terminus (BRCT) domain AB984_RS01730 PF02686 Glu-tRNAGln amidotransferase C subunit AB984_RS01735 PF01425 Amidase AB984_RS01740 PF02934 GatB/GatE catalytic domain AB984_RS01740 PF02637 GatB domain AB984_RS01785 PF08439 Oligopeptidase F AB984_RS01785 PF01432 Peptidase family M3 AB984_RS01800 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AB984_RS01800 PF00874 PRD domain AB984_RS01800 PF08279 HTH domain AB984_RS01800 PF05043 Mga helix-turn-helix domain AB984_RS01805 PF03613 PTS system mannose/fructose/sorbose family IID component AB984_RS01810 PF03609 PTS system sorbose-specific iic component AB984_RS01815 PF03830 PTS system sorbose subfamily IIB component AB984_RS01825 PF07972 NrdI Flavodoxin like AB984_RS01830 PF02867 Ribonucleotide reductase, barrel domain AB984_RS01830 PF08343 Ribonucleotide reductase N-terminal AB984_RS01830 PF00317 Ribonucleotide reductase, all-alpha domain AB984_RS01835 PF00268 Ribonucleotide reductase, small chain AB984_RS01850 PF00924 Mechanosensitive ion channel AB984_RS01855 PF04073 Aminoacyl-tRNA editing domain AB984_RS01860 PF12822 ECF transporter, substrate-specific component AB984_RS01865 PF01268 Formate--tetrahydrofolate ligase AB984_RS01875 PF17674 HHH domain AB984_RS01875 PF00575 S1 RNA binding domain AB984_RS01875 PF09371 Tex-like protein N-terminal domain AB984_RS01875 PF16921 Tex protein YqgF-like domain AB984_RS01885 PF00119 ATP synthase A chain AB984_RS01890 PF00137 ATP synthase subunit C AB984_RS01900 PF00213 ATP synthase delta (OSCP) subunit AB984_RS01905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AB984_RS01905 PF00306 ATP synthase alpha/beta chain, C terminal domain AB984_RS01905 PF02874 ATP synthase alpha/beta family, beta-barrel domain AB984_RS01910 PF00231 ATP synthase AB984_RS01915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AB984_RS01915 PF02874 ATP synthase alpha/beta family, beta-barrel domain AB984_RS01920 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AB984_RS01920 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AB984_RS01925 PF02386 Cation transport protein AB984_RS01930 PF02080 TrkA-C domain AB984_RS01930 PF02254 TrkA-N domain AB984_RS01935 PF00085 Thioredoxin AB984_RS01940 PF01206 Sulfurtransferase TusA AB984_RS01940 PF00581 Rhodanese-like domain AB984_RS01945 PF02583 Metal-sensitive transcriptional repressor AB984_RS01950 PF13936 Helix-turn-helix domain AB984_RS01970 PF01470 Pyroglutamyl peptidase AB984_RS01985 PF03993 Domain of Unknown Function (DUF349) AB984_RS01995 PF12464 Maltose acetyltransferase AB984_RS01995 PF14602 Hexapeptide repeat of succinyl-transferase AB984_RS02040 PF01261 Xylose isomerase-like TIM barrel AB984_RS02050 PF02901 Pyruvate formate lyase-like AB984_RS02050 PF01228 Glycine radical AB984_RS02055 PF10282 Lactonase, 7-bladed beta-propeller AB984_RS02060 PF11975 Family 4 glycosyl hydrolase C-terminal domain AB984_RS02060 PF02056 Family 4 glycosyl hydrolase AB984_RS02070 PF01418 Helix-turn-helix domain, rpiR family AB984_RS02070 PF01380 SIS domain AB984_RS02080 PF03062 MBOAT, membrane-bound O-acyltransferase family AB984_RS02090 PF00266 Aminotransferase class-V AB984_RS02095 PF00132 Bacterial transferase hexapeptide (six repeats) AB984_RS02095 PF12804 MobA-like NTP transferase domain AB984_RS02100 PF02397 Bacterial sugar transferase AB984_RS02105 PF17890 Peptidoglycan hydrolase LytB WW-like domain AB984_RS02105 PF18342 Endo-beta-N-acetylglucosaminidase LytB WW domain AB984_RS02105 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AB984_RS02105 PF01473 Putative cell wall binding repeat AB984_RS02110 PF01432 Peptidase family M3 AB984_RS02110 PF08439 Oligopeptidase F AB984_RS02125 PF02653 Branched-chain amino acid transport system / permease component AB984_RS02130 PF00005 ABC transporter AB984_RS02130 PF09383 NIL domain AB984_RS02150 PF00005 ABC transporter AB984_RS02150 PF17912 MalK OB fold domain AB984_RS02155 PF00528 Binding-protein-dependent transport system inner membrane component AB984_RS02160 PF00528 Binding-protein-dependent transport system inner membrane component AB984_RS02170 PF13416 Bacterial extracellular solute-binding protein AB984_RS02185 PF01712 Deoxynucleoside kinase AB984_RS02190 PF00132 Bacterial transferase hexapeptide (six repeats) AB984_RS02195 PF13936 Helix-turn-helix domain AB984_RS02200 PF00709 Adenylosuccinate synthetase AB984_RS02205 PF02872 5'-nucleotidase, C-terminal domain AB984_RS02205 PF00149 Calcineurin-like phosphoesterase AB984_RS02215 PF00664 ABC transporter transmembrane region AB984_RS02215 PF00005 ABC transporter AB984_RS02220 PF00005 ABC transporter AB984_RS02220 PF00664 ABC transporter transmembrane region AB984_RS02225 PF05343 M42 glutamyl aminopeptidase AB984_RS02230 PF13936 Helix-turn-helix domain AB984_RS02240 PF00392 Bacterial regulatory proteins, gntR family AB984_RS02240 PF07702 UTRA domain AB984_RS02245 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AB984_RS02250 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AB984_RS02255 PF00557 Metallopeptidase family M24 AB984_RS02255 PF01321 Creatinase/Prolidase N-terminal domain AB984_RS02275 PF10437 Bacterial lipoate protein ligase C-terminus AB984_RS02275 PF03099 Biotin/lipoate A/B protein ligase family AB984_RS02280 PF00676 Dehydrogenase E1 component AB984_RS02285 PF02780 Transketolase, C-terminal domain AB984_RS02285 PF02779 Transketolase, pyrimidine binding domain AB984_RS02290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AB984_RS02290 PF00364 Biotin-requiring enzyme AB984_RS02290 PF02817 e3 binding domain AB984_RS02295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB984_RS02295 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB984_RS02300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AB984_RS02305 PF00528 Binding-protein-dependent transport system inner membrane component AB984_RS02310 PF00528 Binding-protein-dependent transport system inner membrane component AB984_RS02310 PF12911 N-terminal TM domain of oligopeptide transport permease C AB984_RS02315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB984_RS02315 PF00005 ABC transporter AB984_RS02320 PF00005 ABC transporter AB984_RS02320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AB984_RS02335 PF00664 ABC transporter transmembrane region AB984_RS02335 PF00005 ABC transporter AB984_RS02340 PF00005 ABC transporter AB984_RS02340 PF00664 ABC transporter transmembrane region AB984_RS02350 PF13419 Haloacid dehalogenase-like hydrolase AB984_RS02360 PF00571 CBS domain AB984_RS02360 PF02833 DHHA2 domain AB984_RS02360 PF01368 DHH family AB984_RS02360 PF07085 DRTGG domain AB984_RS02365 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AB984_RS02365 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AB984_RS02370 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AB984_RS02370 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AB984_RS02375 PF00300 Histidine phosphatase superfamily (branch 1) AB984_RS02385 PF00561 alpha/beta hydrolase fold AB984_RS02390 PF01380 SIS domain AB984_RS02395 PF13936 Helix-turn-helix domain AB984_RS02400 PF03051 Peptidase C1-like family AB984_RS02410 PF13735 tRNA nucleotidyltransferase domain 2 putative AB984_RS02410 PF01743 Poly A polymerase head domain AB984_RS02410 PF12627 Probable RNA and SrmB- binding site of polymerase A AB984_RS02415 PF00005 ABC transporter AB984_RS02425 PF03471 Transporter associated domain AB984_RS02425 PF00571 CBS domain AB984_RS02425 PF01595 Cyclin M transmembrane N-terminal domain AB984_RS02435 PF00291 Pyridoxal-phosphate dependent enzyme AB984_RS02445 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AB984_RS02445 PF01411 tRNA synthetases class II (A) AB984_RS02445 PF02272 DHHA1 domain AB984_RS02450 PF06135 IreB regulatory phosphoprotein AB984_RS02455 PF03652 Holliday junction resolvase AB984_RS02465 PF02618 YceG-like family AB984_RS02470 PF00485 Phosphoribulokinase / Uridine kinase family AB984_RS02475 PF01272 Transcription elongation factor, GreA/GreB, C-term AB984_RS02475 PF03449 Transcription elongation factor, N-terminal AB984_RS02485 PF03772 Competence protein AB984_RS02485 PF13567 Domain of unknown function (DUF4131) AB984_RS02485 PF00753 Metallo-beta-lactamase superfamily AB984_RS02495 PF01649 Ribosomal protein S20 AB984_RS02500 PF02911 Formyl transferase, C-terminal domain AB984_RS02500 PF00551 Formyl transferase AB984_RS02510 PF03144 Elongation factor Tu domain 2 AB984_RS02510 PF00009 Elongation factor Tu GTP binding domain AB984_RS02510 PF00679 Elongation factor G C-terminus AB984_RS02510 PF06421 GTP-binding protein LepA C-terminus AB984_RS02520 PF04055 Radical SAM superfamily AB984_RS02520 PF06969 HemN C-terminal domain AB984_RS02530 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AB984_RS02530 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AB984_RS02540 PF00312 Ribosomal protein S15 AB984_RS02545 PF01138 3' exoribonuclease family, domain 1 AB984_RS02545 PF03725 3' exoribonuclease family, domain 2 AB984_RS02545 PF00575 S1 RNA binding domain AB984_RS02545 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AB984_RS02545 PF00013 KH domain AB984_RS02555 PF01230 HIT domain AB984_RS02565 PF09312 SurA N-terminal domain AB984_RS02565 PF00639 PPIC-type PPIASE domain AB984_RS02570 PF00005 ABC transporter AB984_RS02575 PF01458 Uncharacterized protein family (UPF0051) AB984_RS02580 PF00266 Aminotransferase class-V AB984_RS02585 PF01592 NifU-like N terminal domain AB984_RS02590 PF01458 Uncharacterized protein family (UPF0051) AB984_RS02595 PF01812 5-formyltetrahydrofolate cyclo-ligase family AB984_RS02610 PF00579 tRNA synthetases class I (W and Y) AB984_RS02610 PF01479 S4 domain AB984_RS02620 PF00163 Ribosomal protein S4/S9 N-terminal domain AB984_RS02620 PF01479 S4 domain AB984_RS02630 PF00266 Aminotransferase class-V AB984_RS02635 PF02568 Thiamine biosynthesis protein (ThiI) AB984_RS02635 PF02926 THUMP domain AB984_RS02640 PF02978 Signal peptide binding domain AB984_RS02640 PF02881 SRP54-type protein, helical bundle domain AB984_RS02640 PF00448 SRP54-type protein, GTPase domain AB984_RS02645 PF01245 Ribosomal protein L19 AB984_RS02650 PF10502 Signal peptidase, peptidase S26 AB984_RS02655 PF01926 50S ribosome-binding GTPase AB984_RS02660 PF01351 Ribonuclease HII AB984_RS02665 PF02481 DNA recombination-mediator protein A AB984_RS02665 PF17782 DprA winged helix domain AB984_RS02670 PF01131 DNA topoisomerase AB984_RS02670 PF01751 Toprim domain AB984_RS02670 PF01396 Topoisomerase DNA binding C4 zinc finger AB984_RS02675 PF01134 Glucose inhibited division protein A AB984_RS02680 PF00589 Phage integrase family AB984_RS02680 PF02899 Phage integrase, N-terminal SAM-like domain AB984_RS02690 PF01783 Ribosomal L32p protein family AB984_RS02695 PF03816 Cell envelope-related transcriptional attenuator domain AB984_RS02705 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AB984_RS02705 PF01565 FAD binding domain AB984_RS02710 PF03023 Lipid II flippase MurJ AB984_RS02715 PF02381 MraZ protein, putative antitoxin-like AB984_RS02720 PF01795 MraW methylase family AB984_RS02730 PF03717 Penicillin-binding Protein dimerisation domain AB984_RS02730 PF03793 PASTA domain AB984_RS02730 PF00905 Penicillin binding protein transpeptidase domain AB984_RS02735 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AB984_RS02735 PF00953 Glycosyl transferase family 4 AB984_RS02740 PF08245 Mur ligase middle domain AB984_RS02740 PF02875 Mur ligase family, glutamate ligase domain AB984_RS02755 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AB984_RS02755 PF17768 RecJ OB domain AB984_RS02755 PF02272 DHHA1 domain AB984_RS02755 PF01368 DHH family AB984_RS02765 PF00156 Phosphoribosyl transferase domain AB984_RS02770 PF13291 ACT domain AB984_RS02770 PF04607 Region found in RelA / SpoT proteins AB984_RS02770 PF02824 TGS domain AB984_RS02775 PF03129 Anticodon binding domain AB984_RS02775 PF13393 Histidyl-tRNA synthetase AB984_RS02780 PF00152 tRNA synthetases class II (D, K and N) AB984_RS02780 PF01336 OB-fold nucleic acid binding domain AB984_RS02780 PF02938 GAD domain AB984_RS02785 PF00707 Translation initiation factor IF-3, C-terminal domain AB984_RS02785 PF05198 Translation initiation factor IF-3, N-terminal domain AB984_RS02790 PF01632 Ribosomal protein L35 AB984_RS02795 PF00453 Ribosomal protein L20 AB984_RS02810 PF01725 Ham1 family AB984_RS02820 PF00588 SpoU rRNA Methylase family AB984_RS02830 PF01042 Endoribonuclease L-PSP AB984_RS02835 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AB984_RS02835 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AB984_RS02840 PF02773 S-adenosylmethionine synthetase, C-terminal domain AB984_RS02840 PF02772 S-adenosylmethionine synthetase, central domain AB984_RS02840 PF00438 S-adenosylmethionine synthetase, N-terminal domain AB984_RS02845 PF05636 HIGH Nucleotidyl Transferase AB984_RS02850 PF02390 Putative methyltransferase AB984_RS02855 PF05343 M42 glutamyl aminopeptidase AB984_RS02870 PF02875 Mur ligase family, glutamate ligase domain AB984_RS02870 PF01225 Mur ligase family, catalytic domain AB984_RS02870 PF08245 Mur ligase middle domain AB984_RS02885 PF00356 Bacterial regulatory proteins, lacI family AB984_RS02895 PF00293 NUDIX domain AB984_RS02910 PF00753 Metallo-beta-lactamase superfamily AB984_RS02910 PF17770 Ribonuclease J C-terminal domain AB984_RS02910 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AB984_RS02915 PF01327 Polypeptide deformylase AB984_RS02920 PF01098 Cell cycle protein AB984_RS02930 PF01628 HrcA protein C terminal domain AB984_RS02935 PF01025 GrpE AB984_RS02940 PF00012 Hsp70 protein AB984_RS02945 PF00684 DnaJ central domain AB984_RS02945 PF01556 DnaJ C terminal domain AB984_RS02945 PF00226 DnaJ domain AB984_RS02950 PF17871 AAA lid domain AB984_RS02950 PF00004 ATPase family associated with various cellular activities (AAA) AB984_RS02950 PF07724 AAA domain (Cdc48 subfamily) AB984_RS02950 PF02861 Clp amino terminal domain, pathogenicity island component AB984_RS02950 PF10431 C-terminal, D2-small domain, of ClpB protein AB984_RS02955 PF06912 Protein of unknown function (DUF1275) AB984_RS03210 PF05257 CHAP domain AB984_RS03210 PF01476 LysM domain AB984_RS03230 PF00156 Phosphoribosyl transferase domain AB984_RS03235 PF00534 Glycosyl transferases group 1 AB984_RS03235 PF13439 Glycosyltransferase Family 4 AB984_RS03240 PF01336 OB-fold nucleic acid binding domain AB984_RS03240 PF01966 HD domain AB984_RS03245 PF00886 Ribosomal protein S16 AB984_RS03255 PF05239 PRC-barrel domain AB984_RS03255 PF01782 RimM N-terminal domain AB984_RS03260 PF01746 tRNA (Guanine-1)-methyltransferase AB984_RS03265 PF13936 Helix-turn-helix domain AB984_RS03270 PF07943 Penicillin-binding protein 5, C-terminal domain AB984_RS03270 PF00768 D-alanyl-D-alanine carboxypeptidase AB984_RS03280 PF00155 Aminotransferase class I and II AB984_RS03285 PF00318 Ribosomal protein S2 AB984_RS03290 PF00889 Elongation factor TS AB984_RS03295 PF00696 Amino acid kinase family AB984_RS03300 PF01765 Ribosome recycling factor AB984_RS03305 PF01255 Putative undecaprenyl diphosphate synthase AB984_RS03315 PF02163 Peptidase family M50 AB984_RS03315 PF13180 PDZ domain AB984_RS03325 PF03006 Haemolysin-III related AB984_RS03330 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AB984_RS03330 PF01473 Putative cell wall binding repeat AB984_RS03330 PF18342 Endo-beta-N-acetylglucosaminidase LytB WW domain AB984_RS03330 PF17890 Peptidoglycan hydrolase LytB WW-like domain AB984_RS03350 PF00730 HhH-GPD superfamily base excision DNA repair protein AB984_RS03350 PF00633 Helix-hairpin-helix motif AB984_RS03350 PF10576 Iron-sulfur binding domain of endonuclease III AB984_RS03355 PF08245 Mur ligase middle domain AB984_RS03355 PF02875 Mur ligase family, glutamate ligase domain AB984_RS03355 PF01225 Mur ligase family, catalytic domain AB984_RS03360 PF01820 D-ala D-ala ligase N-terminus AB984_RS03360 PF07478 D-ala D-ala ligase C-terminus AB984_RS03365 PF00842 Alanine racemase, C-terminal domain AB984_RS03365 PF01168 Alanine racemase, N-terminal domain AB984_RS03370 PF00912 Transglycosylase AB984_RS03370 PF00905 Penicillin binding protein transpeptidase domain AB984_RS03375 PF03838 Recombination protein U AB984_RS03380 PF05103 DivIVA protein AB984_RS03395 PF01066 CDP-alcohol phosphatidyltransferase AB984_RS03400 PF00154 recA bacterial DNA recombination protein AB984_RS03405 PF12072 Domain of unknown function (DUF3552) AB984_RS03405 PF00013 KH domain AB984_RS03405 PF01966 HD domain AB984_RS03410 PF13277 YmdB-like protein AB984_RS03415 PF17770 Ribonuclease J C-terminal domain AB984_RS03415 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AB984_RS03415 PF00753 Metallo-beta-lactamase superfamily AB984_RS03420 PF01580 FtsK/SpoIIIE family AB984_RS03420 PF09397 Ftsk gamma domain AB984_RS03420 PF17854 FtsK alpha domain AB984_RS03435 PF03129 Anticodon binding domain AB984_RS03435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AB984_RS03435 PF04073 Aminoacyl-tRNA editing domain AB984_RS03445 PF03672 Uncharacterised protein family (UPF0154) AB984_RS03455 PF00579 tRNA synthetases class I (W and Y) AB984_RS03460 PF03960 ArsC family AB984_RS03475 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AB984_RS03475 PF13538 UvrD-like helicase C-terminal domain AB984_RS03475 PF14490 Helix-hairpin-helix containing domain AB984_RS03480 PF01741 Large-conductance mechanosensitive channel, MscL AB984_RS03485 PF07687 Peptidase dimerisation domain AB984_RS03485 PF01546 Peptidase family M20/M25/M40 AB984_RS03490 PF02378 Phosphotransferase system, EIIC AB984_RS03490 PF00367 phosphotransferase system, EIIB AB984_RS03490 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AB984_RS03535 PF00005 ABC transporter AB984_RS03540 PF00005 ABC transporter AB984_RS03560 PF04055 Radical SAM superfamily AB984_RS03560 PF13186 Iron-sulfur cluster-binding domain AB984_RS03590 PF07693 KAP family P-loop domain AB984_RS03600 PF12704 MacB-like periplasmic core domain AB984_RS03600 PF02687 FtsX-like permease family AB984_RS03600 PF00005 ABC transporter AB984_RS03625 PF00005 ABC transporter AB984_RS03645 PF00005 ABC transporter AB984_RS03650 PF00248 Aldo/keto reductase family AB984_RS03655 PF09962 Uncharacterized conserved protein (DUF2196) AB984_RS03680 PF00455 DeoR C terminal sensor domain AB984_RS03680 PF08220 DeoR-like helix-turn-helix domain AB984_RS03690 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AB984_RS03695 PF03611 PTS system sugar-specific permease component AB984_RS03700 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AB984_RS03705 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AB984_RS03710 PF01261 Xylose isomerase-like TIM barrel AB984_RS03715 PF00596 Class II Aldolase and Adducin N-terminal domain AB984_RS03725 PF03949 Malic enzyme, NAD binding domain AB984_RS03725 PF00390 Malic enzyme, N-terminal domain AB984_RS03730 PF10415 Fumarase C C-terminus AB984_RS03730 PF00206 Lyase AB984_RS03735 PF10415 Fumarase C C-terminus AB984_RS03735 PF00206 Lyase AB984_RS03745 PF02687 FtsX-like permease family AB984_RS03745 PF12704 MacB-like periplasmic core domain AB984_RS03745 PF00005 ABC transporter AB984_RS03750 PF00817 impB/mucB/samB family AB984_RS03750 PF11799 impB/mucB/samB family C-terminal domain AB984_RS03750 PF11798 IMS family HHH motif AB984_RS03760 PF00746 LPXTG cell wall anchor motif AB984_RS03760 PF07501 G5 domain AB984_RS03760 PF04650 YSIRK type signal peptide AB984_RS03760 PF00728 Glycosyl hydrolase family 20, catalytic domain AB984_RS03770 PF01207 Dihydrouridine synthase (Dus) AB984_RS03775 PF00570 HRDC domain AB984_RS03775 PF16124 RecQ zinc-binding AB984_RS03775 PF00270 DEAD/DEAH box helicase AB984_RS03775 PF09382 RQC domain AB984_RS03775 PF00271 Helicase conserved C-terminal domain AB984_RS03785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AB984_RS03785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AB984_RS03800 PF00392 Bacterial regulatory proteins, gntR family AB984_RS03800 PF07729 FCD domain AB984_RS03805 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AB984_RS03810 PF02632 BioY family AB984_RS03815 PF02237 Biotin protein ligase C terminal domain AB984_RS03815 PF03099 Biotin/lipoate A/B protein ligase family AB984_RS03815 PF08279 HTH domain AB984_RS03820 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase AB984_RS03820 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AB984_RS03825 PF08218 Citrate lyase ligase C-terminal domain AB984_RS03830 PF06857 Malonate decarboxylase delta subunit (MdcD) AB984_RS03835 PF03328 HpcH/HpaI aldolase/citrate lyase family AB984_RS03840 PF04223 Citrate lyase, alpha subunit (CitF) AB984_RS03845 PF03390 2-hydroxycarboxylate transporter family AB984_RS03850 PF00682 HMGL-like AB984_RS03850 PF02436 Conserved carboxylase domain AB984_RS03850 PF00364 Biotin-requiring enzyme AB984_RS03860 PF00364 Biotin-requiring enzyme AB984_RS03865 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AB984_RS03895 PF02278 Polysaccharide lyase family 8, super-sandwich domain AB984_RS03895 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain AB984_RS03895 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain AB984_RS03900 PF05525 Branched-chain amino acid transport protein AB984_RS03925 PF04991 LicD family AB984_RS03930 PF00561 alpha/beta hydrolase fold AB984_RS03950 PF00375 Sodium:dicarboxylate symporter family AB984_RS03955 PF03577 Peptidase family C69 AB984_RS03965 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AB984_RS03970 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AB984_RS03970 PF02837 Glycosyl hydrolases family 2, sugar binding domain AB984_RS03970 PF00703 Glycosyl hydrolases family 2 AB984_RS03970 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AB984_RS03970 PF16355 Domain of unknown function (DUF4982) AB984_RS03990 PF02492 CobW/HypB/UreG, nucleotide-binding domain AB984_RS03990 PF07683 Cobalamin synthesis protein cobW C-terminal domain AB984_RS04015 PF01479 S4 domain AB984_RS04015 PF00849 RNA pseudouridylate synthase AB984_RS04020 PF04304 Protein of unknown function (DUF454) AB984_RS04025 PF00664 ABC transporter transmembrane region AB984_RS04025 PF00005 ABC transporter AB984_RS04030 PF00005 ABC transporter AB984_RS04030 PF00664 ABC transporter transmembrane region AB984_RS04035 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AB984_RS04035 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AB984_RS04045 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AB984_RS04045 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AB984_RS04050 PF00696 Amino acid kinase family AB984_RS04055 PF03606 C4-dicarboxylate anaerobic carrier AB984_RS04075 PF02645 Uncharacterised protein, DegV family COG1307 AB984_RS04080 PF00781 Diacylglycerol kinase catalytic domain AB984_RS04095 PF00072 Response regulator receiver domain AB984_RS04095 PF04397 LytTr DNA-binding domain AB984_RS04100 PF00005 ABC transporter AB984_RS04125 PF07556 Protein of unknown function (DUF1538) AB984_RS04135 PF02378 Phosphotransferase system, EIIC AB984_RS04155 PF00392 Bacterial regulatory proteins, gntR family AB984_RS04155 PF07702 UTRA domain AB984_RS04160 PF12848 ABC transporter AB984_RS04160 PF00005 ABC transporter AB984_RS04170 PF04892 VanZ like family AB984_RS04175 PF06445 GyrI-like small molecule binding domain AB984_RS04175 PF12833 Helix-turn-helix domain AB984_RS04210 PF10609 NUBPL iron-transfer P-loop NTPase AB984_RS04215 PF00437 Type II/IV secretion system protein AB984_RS04240 PF12437 Glutamine synthetase type III N terminal AB984_RS04240 PF18318 Glutamine synthetase C-terminal domain AB984_RS04240 PF00120 Glutamine synthetase, catalytic domain AB984_RS04250 PF13977 BetI-type transcriptional repressor, C-terminal AB984_RS04250 PF00440 Bacterial regulatory proteins, tetR family AB984_RS04255 PF03176 MMPL family AB984_RS04270 PF05525 Branched-chain amino acid transport protein AB984_RS04280 PF18146 Damage-inducible protein CinA KH domain AB984_RS04280 PF02464 Competence-damaged protein AB984_RS04280 PF00994 Probable molybdopterin binding domain AB984_RS04285 PF00484 Carbonic anhydrase AB984_RS04290 PF12848 ABC transporter AB984_RS04290 PF00005 ABC transporter AB984_RS04305 PF02378 Phosphotransferase system, EIIC AB984_RS04315 PF02378 Phosphotransferase system, EIIC AB984_RS04320 PF01380 SIS domain AB984_RS04320 PF01418 Helix-turn-helix domain, rpiR family AB984_RS04325 PF13580 SIS domain AB984_RS04330 PF03702 Anhydro-N-acetylmuramic acid kinase AB984_RS04335 PF02397 Bacterial sugar transferase AB984_RS04350 PF08485 Polysaccharide biosynthesis protein C-terminal AB984_RS04350 PF02719 Polysaccharide biosynthesis protein AB984_RS04355 PF01370 NAD dependent epimerase/dehydratase family AB984_RS04360 PF02350 UDP-N-acetylglucosamine 2-epimerase AB984_RS04370 PF12804 MobA-like NTP transferase domain AB984_RS04375 PF04991 LicD family AB984_RS04380 PF00892 EamA-like transporter family AB984_RS04385 PF12804 MobA-like NTP transferase domain AB984_RS04390 PF04346 Ethanolamine utilisation protein, EutH AB984_RS04400 PF05167 Uncharacterised ACR (DUF711) AB984_RS04415 PF00486 Transcriptional regulatory protein, C terminal AB984_RS04415 PF00072 Response regulator receiver domain AB984_RS04420 PF00512 His Kinase A (phospho-acceptor) domain AB984_RS04420 PF00672 HAMP domain AB984_RS04420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB984_RS04425 PF12704 MacB-like periplasmic core domain AB984_RS04425 PF02687 FtsX-like permease family AB984_RS04430 PF00005 ABC transporter AB984_RS04435 PF13382 Adenine deaminase C-terminal domain AB984_RS04435 PF01979 Amidohydrolase family AB984_RS04445 PF08402 TOBE domain AB984_RS04445 PF00005 ABC transporter AB984_RS04455 PF00528 Binding-protein-dependent transport system inner membrane component AB984_RS04465 PF01676 Metalloenzyme superfamily AB984_RS04470 PF02899 Phage integrase, N-terminal SAM-like domain AB984_RS04470 PF00589 Phage integrase family AB984_RS04480 PF02463 RecF/RecN/SMC N terminal domain AB984_RS04485 PF02779 Transketolase, pyrimidine binding domain AB984_RS04485 PF02780 Transketolase, C-terminal domain AB984_RS04485 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AB984_RS04490 PF00348 Polyprenyl synthetase AB984_RS04495 PF02609 Exonuclease VII small subunit AB984_RS04500 PF02601 Exonuclease VII, large subunit AB984_RS04500 PF13742 OB-fold nucleic acid binding domain AB984_RS04505 PF01029 NusB family AB984_RS04520 PF01189 16S rRNA methyltransferase RsmB/F AB984_RS04520 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AB984_RS04520 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AB984_RS04525 PF01687 Riboflavin kinase AB984_RS04525 PF06574 FAD synthetase AB984_RS04530 PF01509 TruB family pseudouridylate synthase (N terminal domain) AB984_RS04530 PF16198 tRNA pseudouridylate synthase B C-terminal domain AB984_RS04535 PF00528 Binding-protein-dependent transport system inner membrane component AB984_RS04540 PF00005 ABC transporter AB984_RS04545 PF02033 Ribosome-binding factor A AB984_RS04550 PF00009 Elongation factor Tu GTP binding domain AB984_RS04550 PF04760 Translation initiation factor IF-2, N-terminal region AB984_RS04550 PF11987 Translation-initiation factor 2 AB984_RS04555 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AB984_RS04560 PF04296 Protein of unknown function (DUF448) AB984_RS04565 PF00575 S1 RNA binding domain AB984_RS04565 PF08529 NusA N-terminal domain AB984_RS04565 PF13184 NusA-like KH domain AB984_RS04575 PF00929 Exonuclease AB984_RS04575 PF14579 Helix-hairpin-helix motif AB984_RS04575 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AB984_RS04575 PF07733 Bacterial DNA polymerase III alpha NTPase domain AB984_RS04575 PF11490 DNA polymerase III polC-type N-terminus II AB984_RS04575 PF14480 DNA polymerase III polC-type N-terminus I AB984_RS04575 PF02811 PHP domain AB984_RS04580 PF14622 Ribonuclease-III-like AB984_RS04580 PF00035 Double-stranded RNA binding motif AB984_RS04585 PF00270 DEAD/DEAH box helicase AB984_RS04585 PF00271 Helicase conserved C-terminal domain AB984_RS04585 PF17191 RecG wedge domain AB984_RS04590 PF02734 DAK2 domain AB984_RS04590 PF13684 Dihydroxyacetone kinase family AB984_RS04595 PF03780 Asp23 family, cell envelope-related function AB984_RS04605 PF04101 Glycosyltransferase family 28 C-terminal domain AB984_RS04605 PF03033 Glycosyltransferase family 28 N-terminal domain AB984_RS04610 PF05496 Holliday junction DNA helicase RuvB P-loop domain AB984_RS04610 PF05491 RuvB C-terminal winged helix domain AB984_RS04610 PF17864 RuvB AAA lid domain AB984_RS04615 PF01330 RuvA N terminal domain AB984_RS04615 PF07499 RuvA, C-terminal domain AB984_RS04620 PF09269 Domain of unknown function (DUF1967) AB984_RS04620 PF01926 50S ribosome-binding GTPase AB984_RS04620 PF01018 GTP1/OBG AB984_RS04625 PF01016 Ribosomal L27 protein AB984_RS04630 PF04327 Cysteine protease Prp AB984_RS04635 PF00829 Ribosomal prokaryotic L21 protein AB984_RS04640 PF01522 Polysaccharide deacetylase AB984_RS04640 PF13739 Deacetylase PdaC AB984_RS04640 PF11738 Protein of unknown function (DUF3298) AB984_RS04645 PF13936 Helix-turn-helix domain AB984_RS04650 PF00512 His Kinase A (phospho-acceptor) domain AB984_RS04650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB984_RS04650 PF18719 ArlS sensor domain AB984_RS04655 PF00072 Response regulator receiver domain AB984_RS04655 PF00486 Transcriptional regulatory protein, C terminal AB984_RS04660 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AB984_RS04660 PF01336 OB-fold nucleic acid binding domain AB984_RS04660 PF02811 PHP domain AB984_RS04660 PF14579 Helix-hairpin-helix motif AB984_RS04660 PF07733 Bacterial DNA polymerase III alpha NTPase domain AB984_RS04665 PF01368 DHH family AB984_RS04665 PF02272 DHHA1 domain AB984_RS04670 PF00871 Acetokinase family AB984_RS04675 PF04297 Putative helix-turn-helix protein, YlxM / p13 like AB984_RS04680 PF00448 SRP54-type protein, GTPase domain AB984_RS04680 PF02881 SRP54-type protein, helical bundle domain AB984_RS04685 PF02463 RecF/RecN/SMC N terminal domain AB984_RS04685 PF06470 SMC proteins Flexible Hinge Domain AB984_RS04695 PF01048 Phosphorylase superfamily AB984_RS04700 PF00398 Ribosomal RNA adenine dimethylase AB984_RS04710 PF01467 Cytidylyltransferase-like AB984_RS04720 PF01926 50S ribosome-binding GTPase AB984_RS04720 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AB984_RS04725 PF00206 Lyase AB984_RS04725 PF10397 Adenylosuccinate lyase C-terminus AB984_RS04730 PF03989 DNA gyrase C-terminal domain, beta-propeller AB984_RS04730 PF00521 DNA gyrase/topoisomerase IV, subunit A AB984_RS04735 PF00986 DNA gyrase B subunit, carboxyl terminus AB984_RS04735 PF00204 DNA gyrase B AB984_RS04735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB984_RS04735 PF01751 Toprim domain AB984_RS04740 PF02660 Glycerol-3-phosphate acyltransferase AB984_RS04745 PF00005 ABC transporter AB984_RS04760 PF01709 Transcriptional regulator AB984_RS04765 PF01588 Putative tRNA binding domain AB984_RS04765 PF03147 Ferredoxin-fold anticodon binding domain AB984_RS04765 PF03483 B3/4 domain AB984_RS04765 PF03484 tRNA synthetase B5 domain AB984_RS04765 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AB984_RS04770 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AB984_RS04770 PF01409 tRNA synthetases class II core domain (F) AB984_RS04775 PF00950 ABC 3 transport family AB984_RS04780 PF00005 ABC transporter AB984_RS04785 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB984_RS04785 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB984_RS04795 PF04298 Putative neutral zinc metallopeptidase AB984_RS04800 PF00216 Bacterial DNA-binding protein AB984_RS04805 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AB984_RS04805 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AB984_RS04810 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AB984_RS04810 PF01926 50S ribosome-binding GTPase AB984_RS04815 PF02224 Cytidylate kinase AB984_RS04830 PF08207 Elongation factor P (EF-P) KOW-like domain AB984_RS04830 PF01132 Elongation factor P (EF-P) OB domain AB984_RS04830 PF09285 Elongation factor P, C-terminal AB984_RS04845 PF07963 Prokaryotic N-terminal methylation motif AB984_RS04855 PF00437 Type II/IV secretion system protein AB984_RS04860 PF00753 Metallo-beta-lactamase superfamily AB984_RS04865 PF00471 Ribosomal protein L33 AB984_RS04870 PF03717 Penicillin-binding Protein dimerisation domain AB984_RS04870 PF00905 Penicillin binding protein transpeptidase domain AB984_RS04875 PF00270 DEAD/DEAH box helicase AB984_RS04875 PF00271 Helicase conserved C-terminal domain AB984_RS04885 PF04539 Sigma-70 region 3 AB984_RS04885 PF04545 Sigma-70, region 4 AB984_RS04885 PF00140 Sigma-70 factor, region 1.2 AB984_RS04885 PF03979 Sigma-70 factor, region 1.1 AB984_RS04885 PF04542 Sigma-70 region 2 AB984_RS04890 PF01807 CHC2 zinc finger AB984_RS04890 PF08275 DNA primase catalytic core, N-terminal domain AB984_RS04890 PF10410 DnaB-helicase binding domain of primase AB984_RS04895 PF03129 Anticodon binding domain AB984_RS04895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AB984_RS04900 PF11967 Recombination protein O N terminal AB984_RS04900 PF02565 Recombination protein O C terminal AB984_RS04905 PF07650 KH domain AB984_RS04905 PF01926 50S ribosome-binding GTPase AB984_RS04910 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AB984_RS04920 PF02130 Uncharacterized protein family UPF0054 AB984_RS04925 PF01895 PhoU domain AB984_RS04930 PF00005 ABC transporter AB984_RS04935 PF00528 Binding-protein-dependent transport system inner membrane component AB984_RS04940 PF00528 Binding-protein-dependent transport system inner membrane component AB984_RS04945 PF12849 PBP superfamily domain AB984_RS04950 PF00512 His Kinase A (phospho-acceptor) domain AB984_RS04950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB984_RS04950 PF16736 Single Cache-like AB984_RS04950 PF00989 PAS fold AB984_RS04955 PF00072 Response regulator receiver domain AB984_RS04955 PF00486 Transcriptional regulatory protein, C terminal AB984_RS04960 PF02562 PhoH-like protein AB984_RS04965 PF01165 Ribosomal protein S21 AB984_RS04970 PF00270 DEAD/DEAH box helicase AB984_RS04970 PF00271 Helicase conserved C-terminal domain AB984_RS04975 PF00664 ABC transporter transmembrane region AB984_RS04975 PF00005 ABC transporter AB984_RS04980 PF03649 Uncharacterised protein family (UPF0014) AB984_RS04985 PF01791 DeoC/LacD family aldolase AB984_RS04990 PF02875 Mur ligase family, glutamate ligase domain AB984_RS04990 PF08245 Mur ligase middle domain AB984_RS04990 PF01225 Mur ligase family, catalytic domain AB984_RS05000 PF04452 RNA methyltransferase AB984_RS05005 PF01479 S4 domain AB984_RS05005 PF00849 RNA pseudouridylate synthase AB984_RS05010 PF04079 Segregation and condensation complex subunit ScpB AB984_RS05015 PF02616 Segregation and condensation protein ScpA AB984_RS05020 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AB984_RS05020 PF00591 Glycosyl transferase family, a/b domain AB984_RS05020 PF02885 Glycosyl transferase family, helical bundle domain AB984_RS05025 PF00186 Dihydrofolate reductase AB984_RS05030 PF00303 Thymidylate synthase AB984_RS05040 PF00675 Insulinase (Peptidase family M16) AB984_RS05040 PF05193 Peptidase M16 inactive domain AB984_RS05045 PF05193 Peptidase M16 inactive domain AB984_RS05045 PF00675 Insulinase (Peptidase family M16) AB984_RS05050 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain AB984_RS05050 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AB984_RS05050 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AB984_RS05055 PF02653 Branched-chain amino acid transport system / permease component AB984_RS05060 PF02653 Branched-chain amino acid transport system / permease component AB984_RS05065 PF00005 ABC transporter AB984_RS05070 PF02608 ABC transporter substrate-binding protein PnrA-like AB984_RS05075 PF02608 ABC transporter substrate-binding protein PnrA-like AB984_RS05080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AB984_RS05080 PF02824 TGS domain AB984_RS05080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AB984_RS05080 PF03129 Anticodon binding domain AB984_RS05085 PF02073 Thermophilic metalloprotease (M29) AB984_RS05090 PF00480 ROK family AB984_RS05095 PF02887 Pyruvate kinase, alpha/beta domain AB984_RS05095 PF00224 Pyruvate kinase, barrel domain AB984_RS05095 PF00391 PEP-utilising enzyme, mobile domain AB984_RS05100 PF00365 Phosphofructokinase AB984_RS05105 PF01695 IstB-like ATP binding protein AB984_RS05105 PF07319 Primosomal protein DnaI N-terminus AB984_RS05110 PF07261 Replication initiation and membrane attachment AB984_RS05115 PF01121 Dephospho-CoA kinase AB984_RS05120 PF06827 Zinc finger found in FPG and IleRS AB984_RS05120 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AB984_RS05120 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AB984_RS05125 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AB984_RS05125 PF01367 5'-3' exonuclease, C-terminal SAM fold AB984_RS05125 PF00476 DNA polymerase family A AB984_RS05135 PF01594 AI-2E family transporter AB984_RS05150 PF04002 RadC-like JAB domain AB984_RS05155 PF00091 Tubulin/FtsZ family, GTPase domain AB984_RS05155 PF12327 FtsZ family, C-terminal domain AB984_RS05165 PF00830 Ribosomal L28 family AB984_RS05175 PF00834 Ribulose-phosphate 3 epimerase family AB984_RS05180 PF16745 RsgA N-terminal domain AB984_RS05180 PF03193 RsgA GTPase AB984_RS05185 PF03793 PASTA domain AB984_RS05185 PF00069 Protein kinase domain AB984_RS05195 PF01029 NusB family AB984_RS05195 PF01189 16S rRNA methyltransferase RsmB/F AB984_RS05200 PF17764 3′ DNA-binding domain (3′BD) AB984_RS05200 PF00271 Helicase conserved C-terminal domain AB984_RS05200 PF04851 Type III restriction enzyme, res subunit AB984_RS05200 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AB984_RS05200 PF18074 Primosomal protein N C-terminal domain AB984_RS05205 PF00625 Guanylate kinase AB984_RS05210 PF05670 NFACT protein RNA binding domain AB984_RS05240 PF01966 HD domain AB984_RS05245 PF05524 PEP-utilising enzyme, N-terminal AB984_RS05245 PF00391 PEP-utilising enzyme, mobile domain AB984_RS05245 PF02896 PEP-utilising enzyme, TIM barrel domain AB984_RS05250 PF01813 ATP synthase subunit D AB984_RS05255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AB984_RS05255 PF02874 ATP synthase alpha/beta family, beta-barrel domain AB984_RS05260 PF02874 ATP synthase alpha/beta family, beta-barrel domain AB984_RS05260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AB984_RS05260 PF16886 ATPsynthase alpha/beta subunit N-term extension AB984_RS05280 PF01496 V-type ATPase 116kDa subunit family AB984_RS05300 PF00365 Phosphofructokinase AB984_RS05305 PF16326 ABC transporter C-terminal domain AB984_RS05305 PF00005 ABC transporter AB984_RS05305 PF12848 ABC transporter AB984_RS05315 PF01336 OB-fold nucleic acid binding domain AB984_RS05315 PF00152 tRNA synthetases class II (D, K and N) AB984_RS05320 PF06971 Putative DNA-binding protein N-terminus AB984_RS05320 PF02629 CoA binding domain AB984_RS05325 PF00814 Glycoprotease family AB984_RS05330 PF00583 Acetyltransferase (GNAT) family AB984_RS05335 PF00814 Glycoprotease family AB984_RS05340 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AB984_RS05375 PF04167 Protein of unknown function (DUF402) AB984_RS05390 PF04608 Phosphatidylglycerophosphatase A AB984_RS05395 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AB984_RS05400 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AB984_RS05400 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AB984_RS05405 PF00583 Acetyltransferase (GNAT) family AB984_RS05410 PF00588 SpoU rRNA Methylase family AB984_RS05410 PF08032 RNA 2'-O ribose methyltransferase substrate binding AB984_RS05415 PF06827 Zinc finger found in FPG and IleRS AB984_RS05415 PF00133 tRNA synthetases class I (I, L, M and V) AB984_RS05415 PF08264 Anticodon-binding domain of tRNA AB984_RS05425 PF04472 Cell division protein SepF AB984_RS05430 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AB984_RS05430 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AB984_RS05440 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AB984_RS05440 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AB984_RS05450 PF00689 Cation transporting ATPase, C-terminus AB984_RS05450 PF00690 Cation transporter/ATPase, N-terminus AB984_RS05455 PF13936 Helix-turn-helix domain AB984_RS05460 PF01197 Ribosomal protein L31 AB984_RS05470 PF13476 AAA domain AB984_RS05475 PF00149 Calcineurin-like phosphoesterase AB984_RS05490 PF10509 Galactokinase galactose-binding signature AB984_RS05490 PF08544 GHMP kinases C terminal AB984_RS05490 PF00288 GHMP kinases N terminal domain AB984_RS05495 PF02653 Branched-chain amino acid transport system / permease component AB984_RS05500 PF00005 ABC transporter AB984_RS05505 PF13407 Periplasmic binding protein domain AB984_RS05510 PF00356 Bacterial regulatory proteins, lacI family AB984_RS05520 PF00133 tRNA synthetases class I (I, L, M and V) AB984_RS05520 PF08264 Anticodon-binding domain of tRNA AB984_RS05520 PF10458 Valyl tRNA synthetase tRNA binding arm AB984_RS05525 PF13302 Acetyltransferase (GNAT) domain AB984_RS05535 PF01926 50S ribosome-binding GTPase AB984_RS05540 PF00004 ATPase family associated with various cellular activities (AAA) AB984_RS05540 PF05362 Lon protease (S16) C-terminal proteolytic domain AB984_RS05540 PF02190 ATP-dependent protease La (LON) substrate-binding domain AB984_RS05545 PF05698 Bacterial trigger factor protein (TF) C-terminus AB984_RS05545 PF05697 Bacterial trigger factor protein (TF) AB984_RS05545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AB984_RS05570 PF12850 Calcineurin-like phosphoesterase superfamily domain AB984_RS05575 PF01177 Asp/Glu/Hydantoin racemase AB984_RS05580 PF08459 UvrC Helix-hairpin-helix N-terminal AB984_RS05580 PF01541 GIY-YIG catalytic domain AB984_RS05580 PF02151 UvrB/uvrC motif AB984_RS05585 PF01713 Smr domain AB984_RS05585 PF00488 MutS domain V AB984_RS05595 PF11858 Domain of unknown function (DUF3378) AB984_RS05595 PF01351 Ribonuclease HII AB984_RS05600 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AB984_RS05610 PF01479 S4 domain AB984_RS05610 PF00849 RNA pseudouridylate synthase AB984_RS05615 PF01252 Signal peptidase (SPase) II AB984_RS05630 PF01554 MatE AB984_RS05650 PF13732 Domain of unknown function (DUF4162) AB984_RS05650 PF00005 ABC transporter AB984_RS05660 PF04199 Putative cyclase AB984_RS05665 PF17099 Tryptophan transporter TrpP AB984_RS05670 PF16326 ABC transporter C-terminal domain AB984_RS05670 PF12848 ABC transporter AB984_RS05670 PF00005 ABC transporter AB984_RS05675 PF03023 Lipid II flippase MurJ AB984_RS05685 PF01467 Cytidylyltransferase-like AB984_RS05690 PF00258 Flavodoxin AB984_RS05695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AB984_RS05700 PF05872 Bacterial protein of unknown function (DUF853) AB984_RS05705 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AB984_RS05725 PF12848 ABC transporter AB984_RS05725 PF00005 ABC transporter AB984_RS05725 PF16326 ABC transporter C-terminal domain AB984_RS05745 PF00583 Acetyltransferase (GNAT) family AB984_RS05770 PF00210 Ferritin-like domain AB984_RS05790 PF00380 Ribosomal protein S9/S16 AB984_RS05795 PF00572 Ribosomal protein L13 AB984_RS05800 PF01416 tRNA pseudouridine synthase AB984_RS05805 PF02361 Cobalt transport protein AB984_RS05810 PF00005 ABC transporter AB984_RS05815 PF00005 ABC transporter AB984_RS05820 PF07687 Peptidase dimerisation domain AB984_RS05820 PF01546 Peptidase family M20/M25/M40 AB984_RS05830 PF02872 5'-nucleotidase, C-terminal domain AB984_RS05830 PF00149 Calcineurin-like phosphoesterase AB984_RS05840 PF01381 Helix-turn-helix AB984_RS05845 PF01869 BadF/BadG/BcrA/BcrD ATPase family AB984_RS05855 PF02378 Phosphotransferase system, EIIC AB984_RS05860 PF01196 Ribosomal protein L17 AB984_RS05865 PF01000 RNA polymerase Rpb3/RpoA insert domain AB984_RS05865 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AB984_RS05865 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AB984_RS05870 PF00411 Ribosomal protein S11 AB984_RS05875 PF00416 Ribosomal protein S13/S18 AB984_RS05880 PF00444 Ribosomal protein L36 AB984_RS05885 PF01176 Translation initiation factor 1A / IF-1 AB984_RS05890 PF00557 Metallopeptidase family M24 AB984_RS05895 PF05191 Adenylate kinase, active site lid AB984_RS05900 PF00344 SecY translocase AB984_RS05905 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AB984_RS05910 PF00333 Ribosomal protein S5, N-terminal domain AB984_RS05910 PF03719 Ribosomal protein S5, C-terminal domain AB984_RS05915 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AB984_RS05920 PF00347 Ribosomal protein L6 AB984_RS05925 PF00410 Ribosomal protein S8 AB984_RS05930 PF00253 Ribosomal protein S14p/S29e AB984_RS05935 PF00281 Ribosomal protein L5 AB984_RS05935 PF00673 ribosomal L5P family C-terminus AB984_RS05940 PF00467 KOW motif AB984_RS05940 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AB984_RS05945 PF00238 Ribosomal protein L14p/L23e AB984_RS05950 PF00366 Ribosomal protein S17 AB984_RS05955 PF00831 Ribosomal L29 protein AB984_RS05960 PF00252 Ribosomal protein L16p/L10e AB984_RS05965 PF00189 Ribosomal protein S3, C-terminal domain AB984_RS05965 PF07650 KH domain AB984_RS05970 PF00237 Ribosomal protein L22p/L17e AB984_RS05975 PF00203 Ribosomal protein S19 AB984_RS05980 PF00181 Ribosomal Proteins L2, RNA binding domain AB984_RS05980 PF03947 Ribosomal Proteins L2, C-terminal domain AB984_RS05985 PF00276 Ribosomal protein L23 AB984_RS05990 PF00573 Ribosomal protein L4/L1 family AB984_RS05995 PF00297 Ribosomal protein L3 AB984_RS06000 PF00338 Ribosomal protein S10p/S20e AB984_RS06010 PF00009 Elongation factor Tu GTP binding domain AB984_RS06010 PF03143 Elongation factor Tu C-terminal domain AB984_RS06010 PF03144 Elongation factor Tu domain 2 AB984_RS06015 PF00679 Elongation factor G C-terminus AB984_RS06015 PF03144 Elongation factor Tu domain 2 AB984_RS06015 PF14492 Elongation Factor G, domain II AB984_RS06015 PF03764 Elongation factor G, domain IV AB984_RS06015 PF00009 Elongation factor Tu GTP binding domain AB984_RS06020 PF00177 Ribosomal protein S7p/S5e AB984_RS06025 PF00164 Ribosomal protein S12/S23 AB984_RS06030 PF01594 AI-2E family transporter AB984_RS06035 PF00565 Staphylococcal nuclease homologue AB984_RS06105 PF00005 ABC transporter AB984_RS06110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB984_RS06115 PF00072 Response regulator receiver domain AB984_RS06115 PF00486 Transcriptional regulatory protein, C terminal AB984_RS06130 PF11799 impB/mucB/samB family C-terminal domain AB984_RS06130 PF00817 impB/mucB/samB family AB984_RS06140 PF04397 LytTr DNA-binding domain AB984_RS06140 PF00072 Response regulator receiver domain AB984_RS06165 PF01266 FAD dependent oxidoreductase AB984_RS06180 PF01432 Peptidase family M3 AB984_RS06180 PF08439 Oligopeptidase F AB984_RS06190 PF02557 D-alanyl-D-alanine carboxypeptidase AB984_RS06195 PF01979 Amidohydrolase family AB984_RS06200 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AB984_RS06205 PF03831 PhnA domain AB984_RS06205 PF08274 PhnA Zinc-Ribbon AB984_RS06210 PF03610 PTS system fructose IIA component AB984_RS06210 PF03830 PTS system sorbose subfamily IIB component AB984_RS06215 PF12833 Helix-turn-helix domain AB984_RS06220 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain AB984_RS06220 PF02278 Polysaccharide lyase family 8, super-sandwich domain AB984_RS06220 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain AB984_RS06225 PF17925 Tetracyclin repressor-like, C-terminal domain AB984_RS06225 PF00440 Bacterial regulatory proteins, tetR family AB984_RS06255 PF00356 Bacterial regulatory proteins, lacI family AB984_RS06265 PF03613 PTS system mannose/fructose/sorbose family IID component AB984_RS06270 PF03609 PTS system sorbose-specific iic component AB984_RS06275 PF03830 PTS system sorbose subfamily IIB component AB984_RS06280 PF07470 Glycosyl Hydrolase Family 88 AB984_RS06285 PF01081 KDPG and KHG aldolase AB984_RS06290 PF00294 pfkB family carbohydrate kinase AB984_RS06320 PF00155 Aminotransferase class I and II AB984_RS06380 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AB984_RS06385 PF00528 Binding-protein-dependent transport system inner membrane component AB984_RS06390 PF00528 Binding-protein-dependent transport system inner membrane component AB984_RS06400 PF01380 SIS domain AB984_RS06400 PF01418 Helix-turn-helix domain, rpiR family AB984_RS06405 PF00480 ROK family AB984_RS06410 PF00701 Dihydrodipicolinate synthetase family AB984_RS06415 PF13419 Haloacid dehalogenase-like hydrolase AB984_RS06420 PF01554 MatE AB984_RS06425 PF00756 Putative esterase AB984_RS06445 PF01554 MatE AB984_RS06480 PF00005 ABC transporter AB984_RS06495 PF00166 Chaperonin 10 Kd subunit AB984_RS06500 PF00118 TCP-1/cpn60 chaperonin family AB984_RS06540 PF00027 Cyclic nucleotide-binding domain AB984_RS06540 PF13545 Crp-like helix-turn-helix domain AB984_RS06555 PF00403 Heavy-metal-associated domain AB984_RS06575 PF13276 HTH-like domain AB984_RS06575 PF00665 Integrase core domain AB984_RS06575 PF13333 Integrase core domain AB984_RS06580 PF01420 Type I restriction modification DNA specificity domain AB984_RS06585 PF02384 N-6 DNA Methylase AB984_RS06590 PF01381 Helix-turn-helix AB984_RS06605 PF01580 FtsK/SpoIIIE family AB984_RS06605 PF09397 Ftsk gamma domain AB984_RS06605 PF17854 FtsK alpha domain AB984_RS06620 PF02540 NAD synthase AB984_RS06620 PF00958 GMP synthase C terminal domain AB984_RS06620 PF00117 Glutamine amidotransferase class-I AB984_RS06625 PF00571 CBS domain AB984_RS06625 PF00478 IMP dehydrogenase / GMP reductase domain AB984_RS06630 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AB984_RS06640 PF02423 Ornithine cyclodeaminase/mu-crystallin family AB984_RS06650 PF11495 Archaeal transcriptional regulator TrmB AB984_RS06650 PF01978 Sugar-specific transcriptional regulator TrmB AB984_RS06665 PF00403 Heavy-metal-associated domain AB984_RS06670 PF01022 Bacterial regulatory protein, arsR family AB984_RS06685 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB984_RS06695 PF03575 Peptidase family S51 AB984_RS06710 PF05343 M42 glutamyl aminopeptidase AB984_RS06715 PF02311 AraC-like ligand binding domain AB984_RS06715 PF12833 Helix-turn-helix domain AB984_RS06720 PF08546 Ketopantoate reductase PanE/ApbA C terminal AB984_RS06720 PF02558 Ketopantoate reductase PanE/ApbA AB984_RS06745 PF03313 Serine dehydratase alpha chain AB984_RS06750 PF03315 Serine dehydratase beta chain AB984_RS06750 PF01842 ACT domain AB984_RS06755 PF01042 Endoribonuclease L-PSP AB984_RS06760 PF00155 Aminotransferase class I and II AB984_RS06765 PF01380 SIS domain AB984_RS06765 PF01418 Helix-turn-helix domain, rpiR family AB984_RS06770 PF02378 Phosphotransferase system, EIIC AB984_RS06780 PF13411 MerR HTH family regulatory protein AB984_RS06780 PF06445 GyrI-like small molecule binding domain AB984_RS06795 PF00156 Phosphoribosyl transferase domain AB984_RS06800 PF00860 Permease family AB984_RS06805 PF03952 Enolase, N-terminal domain AB984_RS06805 PF00113 Enolase, C-terminal TIM barrel domain AB984_RS06810 PF00121 Triosephosphate isomerase AB984_RS06815 PF00162 Phosphoglycerate kinase AB984_RS06825 PF00403 Heavy-metal-associated domain AB984_RS06830 PF01048 Phosphorylase superfamily AB984_RS06845 PF01156 Inosine-uridine preferring nucleoside hydrolase AB984_RS06860 PF00171 Aldehyde dehydrogenase family AB984_RS06860 PF00465 Iron-containing alcohol dehydrogenase AB984_RS06880 PF09383 NIL domain AB984_RS06880 PF00005 ABC transporter AB984_RS06885 PF00528 Binding-protein-dependent transport system inner membrane component AB984_RS06890 PF03180 NLPA lipoprotein AB984_RS06895 PF03590 Aspartate-ammonia ligase AB984_RS06910 PF01297 Zinc-uptake complex component A periplasmic AB984_RS06920 PF13350 Tyrosine phosphatase family AB984_RS06930 PF02687 FtsX-like permease family AB984_RS06930 PF12704 MacB-like periplasmic core domain AB984_RS06935 PF00005 ABC transporter AB984_RS06940 PF00069 Protein kinase domain AB984_RS06940 PF03793 PASTA domain AB984_RS06945 PF13936 Helix-turn-helix domain AB984_RS06950 PF02896 PEP-utilising enzyme, TIM barrel domain AB984_RS06950 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AB984_RS06950 PF00391 PEP-utilising enzyme, mobile domain AB984_RS06960 PF16363 GDP-mannose 4,6 dehydratase AB984_RS06970 PF01032 FecCD transport family AB984_RS06980 PF00005 ABC transporter AB984_RS06985 PF01497 Periplasmic binding protein AB984_RS06990 PF00005 ABC transporter AB984_RS07005 PF00005 ABC transporter AB984_RS07005 PF00664 ABC transporter transmembrane region AB984_RS07010 PF00664 ABC transporter transmembrane region AB984_RS07010 PF00005 ABC transporter AB984_RS07020 PF00849 RNA pseudouridylate synthase AB984_RS07020 PF01479 S4 domain AB984_RS07030 PF00005 ABC transporter AB984_RS07040 PF00005 ABC transporter AB984_RS07055 PF00561 alpha/beta hydrolase fold AB984_RS07065 PF00005 ABC transporter AB984_RS07095 PF03613 PTS system mannose/fructose/sorbose family IID component AB984_RS07100 PF03609 PTS system sorbose-specific iic component AB984_RS07125 PF00367 phosphotransferase system, EIIB AB984_RS07125 PF02378 Phosphotransferase system, EIIC AB984_RS07130 PF00874 PRD domain AB984_RS07130 PF03123 CAT RNA binding domain AB984_RS07135 PF00690 Cation transporter/ATPase, N-terminus AB984_RS07135 PF00689 Cation transporting ATPase, C-terminus AB984_RS07145 PF03466 LysR substrate binding domain AB984_RS07145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB984_RS07150 PF00871 Acetokinase family AB984_RS07155 PF01515 Phosphate acetyl/butaryl transferase AB984_RS07165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AB984_RS07165 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB984_RS07170 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AB984_RS07170 PF02817 e3 binding domain AB984_RS07170 PF00364 Biotin-requiring enzyme AB984_RS07175 PF02780 Transketolase, C-terminal domain AB984_RS07175 PF02779 Transketolase, pyrimidine binding domain AB984_RS07180 PF00676 Dehydrogenase E1 component AB984_RS07185 PF00005 ABC transporter AB984_RS07185 PF00664 ABC transporter transmembrane region AB984_RS07190 PF00005 ABC transporter AB984_RS07190 PF00664 ABC transporter transmembrane region AB984_RS07195 PF13411 MerR HTH family regulatory protein AB984_RS07195 PF06445 GyrI-like small molecule binding domain AB984_RS07200 PF13936 Helix-turn-helix domain AB984_RS07210 PF03606 C4-dicarboxylate anaerobic carrier AB984_RS07215 PF01546 Peptidase family M20/M25/M40 AB984_RS07220 PF00293 NUDIX domain AB984_RS07220 PF09297 NADH pyrophosphatase zinc ribbon domain AB984_RS07230 PF13302 Acetyltransferase (GNAT) domain AB984_RS07230 PF03352 Methyladenine glycosylase AB984_RS07230 PF00117 Glutamine amidotransferase class-I AB984_RS07230 PF00958 GMP synthase C terminal domain AB984_RS07230 PF13673 Acetyltransferase (GNAT) domain AB984_RS07235 PF03466 LysR substrate binding domain AB984_RS07235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB984_RS07245 PF02618 YceG-like family AB984_RS07255 PF04074 YhcH/YjgK/YiaL AB984_RS07270 PF13673 Acetyltransferase (GNAT) domain AB984_RS07280 PF00486 Transcriptional regulatory protein, C terminal AB984_RS07280 PF00072 Response regulator receiver domain AB984_RS07300 PF12146 Serine aminopeptidase, S33 AB984_RS07305 PF01171 PP-loop family AB984_RS07310 PF04055 Radical SAM superfamily AB984_RS07320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AB984_RS07320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AB984_RS07330 PF01467 Cytidylyltransferase-like AB984_RS07335 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AB984_RS07345 PF00535 Glycosyl transferase family 2 AB984_RS07345 PF01501 Glycosyl transferase family 8 AB984_RS07350 PF00534 Glycosyl transferases group 1 AB984_RS07350 PF13477 Glycosyl transferase 4-like AB984_RS07355 PF07478 D-ala D-ala ligase C-terminus AB984_RS07355 PF01820 D-ala D-ala ligase N-terminus AB984_RS07360 PF02397 Bacterial sugar transferase AB984_RS07365 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AB984_RS07370 PF02719 Polysaccharide biosynthesis protein AB984_RS07375 PF17103 Stealth protein CR4, conserved region 4 AB984_RS07375 PF17101 Stealth protein CR1, conserved region 1 AB984_RS07375 PF11380 Stealth protein CR2, conserved region 2 AB984_RS07385 PF01381 Helix-turn-helix AB984_RS07415 PF00005 ABC transporter AB984_RS07485 PF13276 HTH-like domain AB984_RS07485 PF00665 Integrase core domain AB984_RS07485 PF13333 Integrase core domain AB984_RS07490 PF01156 Inosine-uridine preferring nucleoside hydrolase AB984_RS07500 PF01156 Inosine-uridine preferring nucleoside hydrolase AB984_RS07510 PF02653 Branched-chain amino acid transport system / permease component AB984_RS07515 PF00005 ABC transporter AB984_RS07520 PF02608 ABC transporter substrate-binding protein PnrA-like AB984_RS07525 PF00294 pfkB family carbohydrate kinase AB984_RS07530 PF00356 Bacterial regulatory proteins, lacI family AB984_RS07540 PF07929 Plasmid pRiA4b ORF-3-like protein AB984_RS07545 PF01636 Phosphotransferase enzyme family AB984_RS07565 PF02687 FtsX-like permease family AB984_RS07565 PF00005 ABC transporter AB984_RS07565 PF12704 MacB-like periplasmic core domain AB984_RS07570 PF00989 PAS fold AB984_RS07570 PF00672 HAMP domain AB984_RS07570 PF00512 His Kinase A (phospho-acceptor) domain AB984_RS07570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AB984_RS07575 PF00072 Response regulator receiver domain AB984_RS07575 PF00486 Transcriptional regulatory protein, C terminal AB984_RS07630 PF00528 Binding-protein-dependent transport system inner membrane component AB984_RS07635 PF00528 Binding-protein-dependent transport system inner membrane component AB984_RS07640 PF00005 ABC transporter AB984_RS07640 PF08402 TOBE domain AB984_RS07650 PF00085 Thioredoxin AB984_RS07655 PF00781 Diacylglycerol kinase catalytic domain AB984_RS07660 PF03816 Cell envelope-related transcriptional attenuator domain AB984_RS07670 PF12850 Calcineurin-like phosphoesterase superfamily domain AB984_RS07675 PF03816 Cell envelope-related transcriptional attenuator domain AB984_RS07690 PF00005 ABC transporter AB984_RS07695 PF00392 Bacterial regulatory proteins, gntR family AB984_RS07700 PF05746 DALR anticodon binding domain AB984_RS07700 PF00750 tRNA synthetases class I (R) AB984_RS07700 PF03485 Arginyl tRNA synthetase N terminal domain AB984_RS07705 PF02645 Uncharacterised protein, DegV family COG1307 AB984_RS07720 PF03466 LysR substrate binding domain AB984_RS07720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB984_RS07725 PF00282 Pyridoxal-dependent decarboxylase conserved domain AB984_RS07740 PF03358 NADPH-dependent FMN reductase AB984_RS07745 PF00497 Bacterial extracellular solute-binding proteins, family 3 AB984_RS07750 PF00528 Binding-protein-dependent transport system inner membrane component AB984_RS07755 PF00005 ABC transporter AB984_RS07760 PF02875 Mur ligase family, glutamate ligase domain AB984_RS07760 PF08245 Mur ligase middle domain AB984_RS07765 PF03167 Uracil DNA glycosylase superfamily AB984_RS07770 PF03816 Cell envelope-related transcriptional attenuator domain AB984_RS07780 PF01070 FMN-dependent dehydrogenase AB984_RS07785 PF08544 GHMP kinases C terminal AB984_RS07785 PF00288 GHMP kinases N terminal domain AB984_RS07795 PF00288 GHMP kinases N terminal domain AB984_RS07795 PF10509 Galactokinase galactose-binding signature AB984_RS07795 PF08544 GHMP kinases C terminal AB984_RS07800 PF02357 Transcription termination factor nusG AB984_RS07800 PF00467 KOW motif AB984_RS07805 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AB984_RS07810 PF00471 Ribosomal protein L33 AB984_RS07820 PF00588 SpoU rRNA Methylase family AB984_RS07820 PF08032 RNA 2'-O ribose methyltransferase substrate binding AB984_RS07825 PF00636 Ribonuclease III domain AB984_RS07830 PF01406 tRNA synthetases class I (C) catalytic domain AB984_RS07830 PF09190 DALR domain AB984_RS07835 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AB984_RS07835 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB984_RS07855 PF10298 WhiA N-terminal LAGLIDADG-like domain AB984_RS07855 PF14527 WhiA LAGLIDADG-like domain AB984_RS07855 PF02650 WhiA C-terminal HTH domain AB984_RS07860 PF01933 Uncharacterised protein family UPF0052 AB984_RS07865 PF03668 P-loop ATPase protein family AB984_RS07870 PF07992 Pyridine nucleotide-disulphide oxidoreductase AB984_RS07875 PF01790 Prolipoprotein diacylglyceryl transferase AB984_RS07880 PF07475 HPr Serine kinase C-terminal domain AB984_RS07880 PF02603 HPr Serine kinase N terminus AB984_RS07885 PF17760 UvrA interaction domain AB984_RS07885 PF17755 UvrA DNA-binding domain AB984_RS07885 PF00005 ABC transporter AB984_RS07890 PF04439 Streptomycin adenylyltransferase AB984_RS07895 PF17757 UvrB interaction domain AB984_RS07895 PF04851 Type III restriction enzyme, res subunit AB984_RS07895 PF12344 Ultra-violet resistance protein B AB984_RS07895 PF02151 UvrB/uvrC motif AB984_RS07895 PF00271 Helicase conserved C-terminal domain AB984_RS07900 PF01471 Putative peptidoglycan binding domain AB984_RS07900 PF17820 PDZ domain AB984_RS07900 PF03572 Peptidase family S41 AB984_RS07905 PF03641 Possible lysine decarboxylase AB984_RS07910 PF13936 Helix-turn-helix domain AB984_RS07915 PF01551 Peptidase family M23 AB984_RS07915 PF08525 Opacity-associated protein A N-terminal motif AB984_RS07915 PF01476 LysM domain AB984_RS07920 PF01551 Peptidase family M23 AB984_RS07920 PF04225 Opacity-associated protein A LysM-like domain AB984_RS07925 PF02687 FtsX-like permease family AB984_RS07925 PF18075 FtsX extracellular domain AB984_RS07930 PF00005 ABC transporter AB984_RS07935 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AB984_RS07935 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AB984_RS07945 PF07517 SecA DEAD-like domain AB984_RS07945 PF07516 SecA Wing and Scaffold domain AB984_RS07945 PF02810 SEC-C motif AB984_RS07945 PF01043 SecA preprotein cross-linking domain AB984_RS07950 PF00313 'Cold-shock' DNA-binding domain AB984_RS07965 PF01145 SPFH domain / Band 7 family AB984_RS07985 PF07733 Bacterial DNA polymerase III alpha NTPase domain AB984_RS07985 PF11490 DNA polymerase III polC-type N-terminus II AB984_RS07985 PF14480 DNA polymerase III polC-type N-terminus I AB984_RS07985 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AB984_RS07985 PF00929 Exonuclease AB984_RS07985 PF14579 Helix-hairpin-helix motif AB984_RS07985 PF02811 PHP domain AB984_RS07990 PF00183 Hsp90 protein AB984_RS07995 PF00654 Voltage gated chloride channel AB984_RS08005 PF00534 Glycosyl transferases group 1 AB984_RS08005 PF13439 Glycosyltransferase Family 4 AB984_RS08010 PF08279 HTH domain AB984_RS08010 PF02829 3H domain AB984_RS08020 PF03960 ArsC family AB984_RS08025 PF03883 Peroxide stress protein YaaA AB984_RS08040 PF00687 Ribosomal protein L1p/L10e family AB984_RS08045 PF00298 Ribosomal protein L11, RNA binding domain AB984_RS08045 PF03946 Ribosomal protein L11, N-terminal domain AB984_RS08055 PF02779 Transketolase, pyrimidine binding domain AB984_RS08055 PF02780 Transketolase, C-terminal domain AB984_RS08055 PF00456 Transketolase, thiamine diphosphate binding domain AB984_RS08060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AB984_RS08060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AB984_RS08060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AB984_RS08060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AB984_RS08065 PF00381 PTS HPr component phosphorylation site AB984_RS08070 PF02590 Predicted SPOUT methyltransferase AB984_RS08075 PF13180 PDZ domain AB984_RS08080 PF00753 Metallo-beta-lactamase superfamily AB984_RS08095 PF00772 DnaB-like helicase N terminal domain AB984_RS08095 PF03796 DnaB-like helicase C terminal domain AB984_RS08100 PF01281 Ribosomal protein L9, N-terminal domain AB984_RS08100 PF03948 Ribosomal protein L9, C-terminal domain AB984_RS08105 PF02272 DHHA1 domain AB984_RS08105 PF01368 DHH family AB984_RS08115 PF01084 Ribosomal protein S18 AB984_RS08120 PF00436 Single-strand binding protein family AB984_RS08125 PF01250 Ribosomal protein S6 AB984_RS08130 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AB984_RS08135 PF03466 LysR substrate binding domain AB984_RS08135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AB984_RS08145 PF02417 Chromate transporter AB984_RS08150 PF00152 tRNA synthetases class II (D, K and N) AB984_RS08150 PF01336 OB-fold nucleic acid binding domain AB984_RS08155 PF01430 Hsp33 protein AB984_RS08160 PF06480 FtsH Extracellular AB984_RS08160 PF17862 AAA+ lid domain AB984_RS08160 PF00004 ATPase family associated with various cellular activities (AAA) AB984_RS08160 PF01434 Peptidase family M41 AB984_RS08165 PF00156 Phosphoribosyl transferase domain AB984_RS08170 PF01171 PP-loop family AB984_RS08195 PF03932 CutC family AB984_RS08205 PF00464 Serine hydroxymethyltransferase AB984_RS08210 PF02502 Ribose/Galactose Isomerase AB984_RS08215 PF01300 Telomere recombination AB984_RS08220 PF13847 Methyltransferase domain AB984_RS08220 PF17827 PrmC N-terminal domain AB984_RS08225 PF03462 PCRF domain AB984_RS08225 PF00472 RF-1 domain AB984_RS08230 PF00265 Thymidine kinase AB984_RS08235 PF01197 Ribosomal protein L31 AB984_RS08255 PF13520 Amino acid permease AB984_RS08270 PF06738 Putative threonine/serine exporter AB984_RS08275 PF03551 Transcriptional regulator PadR-like family AB984_RS08290 PF04055 Radical SAM superfamily AB984_RS08295 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AB984_RS08305 PF00528 Binding-protein-dependent transport system inner membrane component AB984_RS08310 PF00528 Binding-protein-dependent transport system inner membrane component AB984_RS08315 PF00005 ABC transporter AB984_RS08315 PF00571 CBS domain AB984_RS08320 PF01226 Formate/nitrite transporter AB984_RS08325 PF01116 Fructose-bisphosphate aldolase class-II AB984_RS08330 PF00117 Glutamine amidotransferase class-I AB984_RS08330 PF06418 CTP synthase N-terminus AB984_RS08345 PF00557 Metallopeptidase family M24 AB984_RS08345 PF05195 Aminopeptidase P, N-terminal domain AB984_RS08350 PF01966 HD domain AB984_RS08355 PF00749 tRNA synthetases class I (E and Q), catalytic domain AB984_RS08360 PF02803 Thiolase, C-terminal domain AB984_RS08360 PF00108 Thiolase, N-terminal domain AB984_RS08365 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal AB984_RS08365 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal AB984_RS08385 PF06153 Cyclic-di-AMP receptor AB984_RS08390 PF06071 Protein of unknown function (DUF933) AB984_RS08390 PF01926 50S ribosome-binding GTPase AB984_RS08395 PF06107 Bacterial protein of unknown function (DUF951) AB984_RS08400 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AB984_RS08400 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AB984_RS08405 PF02580 D-Tyr-tRNA(Tyr) deacylase AB984_RS08410 PF12002 MgsA AAA+ ATPase C terminal AB984_RS08410 PF05496 Holliday junction DNA helicase RuvB P-loop domain AB984_RS08410 PF16193 AAA C-terminal domain AB984_RS08415 PF00107 Zinc-binding dehydrogenase AB984_RS08415 PF08240 Alcohol dehydrogenase GroES-like domain AB984_RS08420 PF00270 DEAD/DEAH box helicase AB984_RS08420 PF00271 Helicase conserved C-terminal domain AB984_RS08425 PF03372 Endonuclease/Exonuclease/phosphatase family AB984_RS08435 PF12705 PD-(D/E)XK nuclease superfamily AB984_RS08440 PF00580 UvrD/REP helicase N-terminal domain AB984_RS08440 PF12705 PD-(D/E)XK nuclease superfamily AB984_RS08440 PF13361 UvrD-like helicase C-terminal domain AB984_RS08445 PF00293 NUDIX domain AB984_RS08445 PF02545 Maf-like protein AB984_RS08450 PF14572 Phosphoribosyl synthetase-associated domain AB984_RS08450 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AB984_RS08455 PF00483 Nucleotidyl transferase AB984_RS08455 PF00132 Bacterial transferase hexapeptide (six repeats) AB984_RS08460 PF00288 GHMP kinases N terminal domain AB984_RS08460 PF08544 GHMP kinases C terminal AB984_RS08465 PF00398 Ribosomal RNA adenine dimethylase AB984_RS08470 PF13662 Toprim domain AB984_RS08470 PF13331 Domain of unknown function (DUF4093) AB984_RS08485 PF00171 Aldehyde dehydrogenase family AB984_RS08495 PF09383 NIL domain AB984_RS08495 PF00005 ABC transporter AB984_RS08500 PF00528 Binding-protein-dependent transport system inner membrane component AB984_RS08505 PF03180 NLPA lipoprotein AB984_RS08510 PF01026 TatD related DNase AB984_RS08515 PF12631 MnmE helical domain AB984_RS08515 PF10396 GTP-binding protein TrmE N-terminus AB984_RS08515 PF01926 50S ribosome-binding GTPase AB984_RS08520 PF02146 Sir2 family AB984_RS08535 PF17762 HTH domain found in ParB protein AB984_RS08535 PF02195 ParB-like nuclease domain AB984_RS08540 PF13614 AAA domain AB984_RS08545 PF02195 ParB-like nuclease domain AB984_RS08545 PF17762 HTH domain found in ParB protein AB984_RS08550 PF02527 rRNA small subunit methyltransferase G AB984_RS08560 PF14492 Elongation Factor G, domain II AB984_RS08560 PF00009 Elongation factor Tu GTP binding domain AB984_RS08560 PF00679 Elongation factor G C-terminus AB984_RS08560 PF03144 Elongation factor Tu domain 2 AB984_RS08565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AB984_RS08570 PF01134 Glucose inhibited division protein A AB984_RS08570 PF13932 GidA associated domain AB984_RS08575 PF00392 Bacterial regulatory proteins, gntR family AB984_RS08580 PF00005 ABC transporter AB984_RS08590 PF00300 Histidine phosphatase superfamily (branch 1) AB984_RS08595 PF09334 tRNA synthetases class I (M) AB984_RS08595 PF01588 Putative tRNA binding domain AB984_RS08610 PF01475 Ferric uptake regulator family AB984_RS08615 PF00478 IMP dehydrogenase / GMP reductase domain AB984_RS08620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AB984_RS08625 PF09115 DNA polymerase III, delta subunit, C terminal AB984_RS08630 PF02223 Thymidylate kinase AB984_RS08640 PF00293 NUDIX domain AB984_RS08645 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family AB984_RS08655 PF01479 S4 domain AB984_RS08660 PF03461 TRCF domain AB984_RS08660 PF00271 Helicase conserved C-terminal domain AB984_RS08660 PF00270 DEAD/DEAH box helicase AB984_RS08660 PF02559 CarD-like/TRCF domain AB984_RS08660 PF17757 UvrB interaction domain AB984_RS08665 PF01195 Peptidyl-tRNA hydrolase AB984_RS08675 PF02096 60Kd inner membrane protein AB984_RS08680 PF00825 Ribonuclease P AB984_RS08685 PF00468 Ribosomal protein L34