C2R01_RS00045	SM00852	Probable molybdopterin binding domain
C2R01_RS00070	SM00271	DnaJ molecular chaperone homology domain
C2R01_RS00115	SM00904	Riboflavin kinase
C2R01_RS00150	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
C2R01_RS00155	SM00851	MGS-like domain
C2R01_RS00155	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
C2R01_RS00200	SM00893	Electron transfer flavoprotein domain
C2R01_RS00205	SM00893	Electron transfer flavoprotein domain
C2R01_RS00250	SM00650	Ribosomal RNA adenine dimethylases
C2R01_RS00270	SM00271	DnaJ molecular chaperone homology domain
C2R01_RS00290	SM00487	DEAD-like helicases superfamily
C2R01_RS00290	SM00490	helicase superfamily c-terminal domain
C2R01_RS00295	SM00486	DNA polymerase type-B family
C2R01_RS00300	SM01007	Class II Aldolase and Adducin N-terminal domain
C2R01_RS00320	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS00330	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS00370	SM01329	C2R01_RS00370
C2R01_RS00375	SM00917	LeuA allosteric (dimerisation) domain
C2R01_RS00405	SM00354	helix_turn _helix lactose operon repressor
C2R01_RS00480	SM00842	Cell division protein FtsA
C2R01_RS00485	SM00864	Tubulin/FtsZ family, GTPase domain
C2R01_RS00485	SM00865	Tubulin/FtsZ family, C-terminal domain
C2R01_RS00500	SM00957	SecA DEAD-like domain
C2R01_RS00500	SM00958	SecA preprotein cross-linking domain
C2R01_RS00525	SM01240	C2R01_RS00525
C2R01_RS00555	SM00644	C2R01_RS00555
C2R01_RS00570	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2R01_RS00570	SM00895	C2R01_RS00570
C2R01_RS00635	SM00564	beta-propeller repeat
C2R01_RS00645	SM00947	Carbonic anhydrase
C2R01_RS00650	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS00765	SM00487	DEAD-like helicases superfamily
C2R01_RS00765	SM00490	helicase superfamily c-terminal domain
C2R01_RS00765	SM00847	Helicase associated domain (HA2)  Add an annotation
C2R01_RS00785	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS00830	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2R01_RS00840	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2R01_RS00865	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2R01_RS00920	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2R01_RS00930	SM00935	Outer membrane protein (OmpH-like)
C2R01_RS00960	SM00481	DNA polymerase alpha chain like domain
C2R01_RS00980	SM00977	TilS substrate C-terminal domain
C2R01_RS00995	SM01322	C2R01_RS00995
C2R01_RS01040	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS01040	SM00930	C2R01_RS01040
C2R01_RS01100	SM00257	Lysin motif
C2R01_RS01105	SM00849	Metallo-beta-lactamase superfamily
C2R01_RS01120	SM00479	C2R01_RS01120
C2R01_RS01200	SM01321	C2R01_RS01200
C2R01_RS01275	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
C2R01_RS01405	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS01445	SM01130	C2R01_RS01445
C2R01_RS01465	SM00346	helix_turn_helix isocitrate lyase regulation
C2R01_RS01545	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
C2R01_RS01550	SM01092	CO dehydrogenase flavoprotein C-terminal domain
C2R01_RS01605	SM00421	helix_turn_helix, Lux Regulon
C2R01_RS01675	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS01745	SM00052	Putative diguanylate phosphodiesterase
C2R01_RS01745	SM00421	helix_turn_helix, Lux Regulon
C2R01_RS01765	SM00248	ankyrin repeats
C2R01_RS01800	SM00829	Enoylreductase
C2R01_RS01825	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS01865	SM00947	Carbonic anhydrase
C2R01_RS01870	SM01116	C2R01_RS01870
C2R01_RS01880	SM01266	C2R01_RS01880
C2R01_RS01890	SM01038	Beta galactosidase small chain
C2R01_RS01900	SM00354	helix_turn _helix lactose operon repressor
C2R01_RS01905	SM00346	helix_turn_helix isocitrate lyase regulation
C2R01_RS01930	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2R01_RS01955	SM00829	Enoylreductase
C2R01_RS02005	SM00062	Bacterial periplasmic substrate-binding proteins
C2R01_RS02010	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS02025	SM01004	Delta-aminolevulinic acid dehydratase
C2R01_RS02105	SM00098	Alkaline phosphatase homologues
C2R01_RS02115	SM00267	diguanylate cyclase
C2R01_RS02190	SM00448	cheY-homologous receiver domain
C2R01_RS02190	SM00862	Transcriptional regulatory protein, C terminal
C2R01_RS02195	SM00091	PAS domain
C2R01_RS02195	SM00387	Histidine kinase-like ATPases
C2R01_RS02195	SM00388	His Kinase A (phosphoacceptor) domain
C2R01_RS02210	SM00642	Alpha-amylase domain
C2R01_RS02230	SM01323	C2R01_RS02230
C2R01_RS02245	SM00507	HNH nucleases
C2R01_RS02300	SM00861	Transketolase, pyrimidine binding domain
C2R01_RS02315	SM00981	C2R01_RS02315
C2R01_RS02400	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS02400	SM00994	ClpX C4-type zinc finger
C2R01_RS02400	SM01086	C-terminal, D2-small domain, of ClpB protein
C2R01_RS02405	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS02405	SM00464	Found in ATP-dependent protease La (LON)
C2R01_RS02410	SM00411	bacterial (prokaryotic) histone like domain
C2R01_RS02420	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C2R01_RS02445	SM00344	helix_turn_helix ASNC type
C2R01_RS02450	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS02455	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS02460	SM00938	Nitrogen regulatory protein P-II
C2R01_RS02495	SM00052	Putative diguanylate phosphodiesterase
C2R01_RS02505	SM01266	C2R01_RS02505
C2R01_RS02570	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS02580	SM00493	C2R01_RS02580
C2R01_RS02585	SM00387	Histidine kinase-like ATPases
C2R01_RS02655	SM00530	Helix-turn-helix XRE-family like proteins 
C2R01_RS02675	SM00422	helix_turn_helix, mercury resistance
C2R01_RS02685	SM00244	prohibitin homologues
C2R01_RS02690	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS02705	SM00822	C2R01_RS02705
C2R01_RS02715	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS02755	SM00450	Rhodanese Homology Domain
C2R01_RS02770	SM00346	helix_turn_helix isocitrate lyase regulation
C2R01_RS02850	SM01001	AIR carboxylase
C2R01_RS02870	SM00840	C2R01_RS02870
C2R01_RS02915	SM00421	helix_turn_helix, Lux Regulon
C2R01_RS02915	SM00448	cheY-homologous receiver domain
C2R01_RS02960	SM00857	Resolvase, N terminal domain
C2R01_RS02970	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS03100	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS03120	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS03135	SM00028	Tetratricopeptide repeats
C2R01_RS03145	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2R01_RS03145	SM00387	Histidine kinase-like ATPases
C2R01_RS03145	SM00388	His Kinase A (phosphoacceptor) domain
C2R01_RS03150	SM00448	cheY-homologous receiver domain
C2R01_RS03150	SM00862	Transcriptional regulatory protein, C terminal
C2R01_RS03245	SM00923	MbtH-like protein
C2R01_RS03250	SM00823	Phosphopantetheine attachment site
C2R01_RS03250	SM00824	Thioesterase
C2R01_RS03260	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS03305	SM00822	C2R01_RS03305
C2R01_RS03335	SM00470	ParB-like nuclease domain
C2R01_RS03430	SM00764	Citrate lyase ligase C-terminal domain
C2R01_RS03435	SM00091	PAS domain
C2R01_RS03435	SM00387	Histidine kinase-like ATPases
C2R01_RS03440	SM00448	cheY-homologous receiver domain
C2R01_RS03460	SM00357	Cold shock protein domain
C2R01_RS03480	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2R01_RS03510	SM00936	Penicillin-binding protein 5, C-terminal domain 
C2R01_RS03540	SM00855	Phosphoglycerate mutase family
C2R01_RS03570	SM00671	Sel1-like repeats.
C2R01_RS03580	SM00271	DnaJ molecular chaperone homology domain
C2R01_RS03585	SM00671	Sel1-like repeats.
C2R01_RS03610	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS03625	SM00062	Bacterial periplasmic substrate-binding proteins
C2R01_RS03645	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2R01_RS03645	SM01091	Transporter associated domain
C2R01_RS03660	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2R01_RS03825	SM00448	cheY-homologous receiver domain
C2R01_RS03825	SM00862	Transcriptional regulatory protein, C terminal
C2R01_RS03830	SM00387	Histidine kinase-like ATPases
C2R01_RS03830	SM00388	His Kinase A (phosphoacceptor) domain
C2R01_RS03915	SM00796	Allophanate hydrolase subunit 1
C2R01_RS03920	SM00797	Allophanate hydrolase subunit 2
C2R01_RS03930	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
C2R01_RS03930	SM01232	C2R01_RS03930
C2R01_RS03995	SM00861	Transketolase, pyrimidine binding domain
C2R01_RS04010	SM00881	CoA binding domain
C2R01_RS04015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2R01_RS04015	SM00866	C2R01_RS04015
C2R01_RS04025	SM00872	Alpha mannosidase, middle domain
C2R01_RS04160	SM00855	Phosphoglycerate mutase family
C2R01_RS04185	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS04215	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS04270	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2R01_RS04270	SM00876	Biotin and Thiamin Synthesis associated domain
C2R01_RS04290	SM00487	DEAD-like helicases superfamily
C2R01_RS04290	SM00490	helicase superfamily c-terminal domain
C2R01_RS04300	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2R01_RS04305	SM00852	Probable molybdopterin binding domain
C2R01_RS04340	SM00155	Phospholipase D. Active site motifs.
C2R01_RS04365	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS04380	SM00487	DEAD-like helicases superfamily
C2R01_RS04380	SM00490	helicase superfamily c-terminal domain
C2R01_RS04395	SM00487	DEAD-like helicases superfamily
C2R01_RS04395	SM00488	C2R01_RS04395
C2R01_RS04395	SM00491	C2R01_RS04395
C2R01_RS04420	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
C2R01_RS04445	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS04455	SM00062	Bacterial periplasmic substrate-binding proteins
C2R01_RS04455	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2R01_RS04500	SM00529	Helix-turn-helix diphteria tox regulatory element
C2R01_RS04515	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS04550	SM00852	Probable molybdopterin binding domain
C2R01_RS04560	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS04580	SM00052	Putative diguanylate phosphodiesterase
C2R01_RS04585	SM00267	diguanylate cyclase
C2R01_RS04590	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2R01_RS04610	SM00936	Penicillin-binding protein 5, C-terminal domain 
C2R01_RS04615	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2R01_RS04615	SM01134	C2R01_RS04615
C2R01_RS04620	SM00014	Acid phosphatase homologues
C2R01_RS04695	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS04720	SM00062	Bacterial periplasmic substrate-binding proteins
C2R01_RS04720	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2R01_RS04735	SM00062	Bacterial periplasmic substrate-binding proteins
C2R01_RS04735	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2R01_RS04740	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS04755	SM00644	C2R01_RS04755
C2R01_RS04820	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS04825	SM00357	Cold shock protein domain
C2R01_RS04835	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS04835	SM01086	C-terminal, D2-small domain, of ClpB protein
C2R01_RS04845	SM00316	Ribosomal protein S1-like RNA-binding domain
C2R01_RS04855	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS04860	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS04875	SM00344	helix_turn_helix ASNC type
C2R01_RS04880	SM00843	C2R01_RS04880
C2R01_RS04890	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS04900	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2R01_RS04985	SM00316	Ribosomal protein S1-like RNA-binding domain
C2R01_RS04990	SM00411	bacterial (prokaryotic) histone like domain
C2R01_RS04995	SM00849	Metallo-beta-lactamase superfamily
C2R01_RS05000	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS05070	SM00849	Metallo-beta-lactamase superfamily
C2R01_RS05100	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS05115	SM00062	Bacterial periplasmic substrate-binding proteins
C2R01_RS05180	SM00981	C2R01_RS05180
C2R01_RS05185	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS05260	SM00851	MGS-like domain
C2R01_RS05270	SM00881	CoA binding domain
C2R01_RS05275	SM00992	Hemimethylated DNA-binding protein YccV like
C2R01_RS05280	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
C2R01_RS05360	SM00226	Low molecular weight phosphatase family
C2R01_RS05400	SM00357	Cold shock protein domain
C2R01_RS05405	SM00357	Cold shock protein domain
C2R01_RS05430	SM00073	Histidine Phosphotransfer domain
C2R01_RS05430	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2R01_RS05430	SM00387	Histidine kinase-like ATPases
C2R01_RS05430	SM00388	His Kinase A (phosphoacceptor) domain
C2R01_RS05430	SM00448	cheY-homologous receiver domain
C2R01_RS05440	SM00448	cheY-homologous receiver domain
C2R01_RS05440	SM00862	Transcriptional regulatory protein, C terminal
C2R01_RS05465	SM00271	DnaJ molecular chaperone homology domain
C2R01_RS05505	SM00903	Flavin reductase like domain
C2R01_RS05610	SM00028	Tetratricopeptide repeats
C2R01_RS05615	SM00267	diguanylate cyclase
C2R01_RS05655	SM00481	DNA polymerase alpha chain like domain
C2R01_RS05685	SM00421	helix_turn_helix, Lux Regulon
C2R01_RS05720	SM00506	Appr-1"-p processing enzyme
C2R01_RS05725	SM00155	Phospholipase D. Active site motifs.
C2R01_RS05775	SM00450	Rhodanese Homology Domain
C2R01_RS05780	SM00867	YceI-like domain 
C2R01_RS05865	SM00858	C2R01_RS05865
C2R01_RS05910	SM00047	Lysozyme subfamily 2
C2R01_RS05925	SM00316	Ribosomal protein S1-like RNA-binding domain
C2R01_RS05935	SM00363	S4 RNA-binding domain
C2R01_RS05965	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
C2R01_RS05970	SM00822	C2R01_RS05970
C2R01_RS05980	SM00825	Beta-ketoacyl synthase
C2R01_RS06070	SM00257	Lysin motif
C2R01_RS06075	SM00487	DEAD-like helicases superfamily
C2R01_RS06075	SM00490	helicase superfamily c-terminal domain
C2R01_RS06075	SM00982	C2R01_RS06075
C2R01_RS06075	SM01058	CarD-like/TRCF domain
C2R01_RS06090	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS06135	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS06150	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
C2R01_RS06155	SM00387	Histidine kinase-like ATPases
C2R01_RS06160	SM00448	cheY-homologous receiver domain
C2R01_RS06160	SM00862	Transcriptional regulatory protein, C terminal
C2R01_RS06190	SM01329	C2R01_RS06190
C2R01_RS06305	SM00857	Resolvase, N terminal domain
C2R01_RS06310	SM00507	HNH nucleases
C2R01_RS06330	SM00422	helix_turn_helix, mercury resistance
C2R01_RS06335	SM00052	Putative diguanylate phosphodiesterase
C2R01_RS06335	SM01034	Sensors of blue-light using FAD
C2R01_RS06360	SM00052	Putative diguanylate phosphodiesterase
C2R01_RS06485	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2R01_RS06500	SM01005	Alanine racemase, C-terminal domain
C2R01_RS06510	SM01091	Transporter associated domain
C2R01_RS06560	SM01120	C2R01_RS06560
C2R01_RS06570	SM00091	PAS domain
C2R01_RS06570	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS06575	SM00869	Autotransporter beta-domain
C2R01_RS06615	SM01400	C2R01_RS06615
C2R01_RS06640	SM00937	C2R01_RS06640
C2R01_RS06710	SM00421	helix_turn_helix, Lux Regulon
C2R01_RS06710	SM00448	cheY-homologous receiver domain
C2R01_RS06715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2R01_RS06715	SM00387	Histidine kinase-like ATPases
C2R01_RS06730	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2R01_RS06795	SM00448	cheY-homologous receiver domain
C2R01_RS06805	SM00528	Domain in histone-like proteins of HNS family
C2R01_RS06860	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS06865	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS06875	SM00155	Phospholipase D. Active site motifs.
C2R01_RS06970	SM00481	DNA polymerase alpha chain like domain
C2R01_RS06985	SM00363	S4 RNA-binding domain
C2R01_RS06995	SM00822	C2R01_RS06995
C2R01_RS07015	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C2R01_RS07015	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C2R01_RS07015	SM00493	C2R01_RS07015
C2R01_RS07055	SM00014	Acid phosphatase homologues
C2R01_RS07065	SM00028	Tetratricopeptide repeats
C2R01_RS07070	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
C2R01_RS07085	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2R01_RS07085	SM01134	C2R01_RS07085
C2R01_RS07095	SM00052	Putative diguanylate phosphodiesterase
C2R01_RS07095	SM00091	PAS domain
C2R01_RS07095	SM00267	diguanylate cyclase
C2R01_RS07105	SM00357	Cold shock protein domain
C2R01_RS07105	SM00955	C2R01_RS07105
C2R01_RS07125	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS07130	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS07165	SM01230	C2R01_RS07165
C2R01_RS07175	SM00530	Helix-turn-helix XRE-family like proteins 
C2R01_RS07200	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS07225	SM00450	Rhodanese Homology Domain
C2R01_RS07230	SM00642	Alpha-amylase domain
C2R01_RS07285	SM00354	helix_turn _helix lactose operon repressor
C2R01_RS07300	SM00091	PAS domain
C2R01_RS07300	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS07310	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2R01_RS07360	SM00100	Cyclic nucleotide-monophosphate binding domain
C2R01_RS07360	SM00419	helix_turn_helix, cAMP Regulatory protein
C2R01_RS07400	SM00463	Small MutS-related domain
C2R01_RS07405	SM00091	PAS domain
C2R01_RS07405	SM00267	diguanylate cyclase
C2R01_RS07420	SM00487	DEAD-like helicases superfamily
C2R01_RS07420	SM00490	helicase superfamily c-terminal domain
C2R01_RS07540	SM00470	ParB-like nuclease domain
C2R01_RS07590	SM00857	Resolvase, N terminal domain
C2R01_RS07615	SM00890	Domain of unknown function
C2R01_RS07650	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS07790	SM00195	Dual specificity phosphatase, catalytic domain
C2R01_RS07790	SM00404	Protein tyrosine phosphatase, catalytic domain motif
C2R01_RS07800	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS07800	SM00487	DEAD-like helicases superfamily
C2R01_RS07800	SM00490	helicase superfamily c-terminal domain
C2R01_RS07800	SM00847	Helicase associated domain (HA2)  Add an annotation
C2R01_RS07845	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2R01_RS07845	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2R01_RS07845	SM00319	Homologues of the ligand binding domain of Tar
C2R01_RS07855	SM01150	C2R01_RS07855
C2R01_RS07920	SM00530	Helix-turn-helix XRE-family like proteins 
C2R01_RS07940	SM00530	Helix-turn-helix XRE-family like proteins 
C2R01_RS07945	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2R01_RS07955	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS08010	SM00829	Enoylreductase
C2R01_RS08015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2R01_RS08015	SM00895	C2R01_RS08015
C2R01_RS08085	SM00903	Flavin reductase like domain
C2R01_RS08115	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2R01_RS08140	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2R01_RS08160	SM00530	Helix-turn-helix XRE-family like proteins 
C2R01_RS08165	SM00829	Enoylreductase
C2R01_RS08170	SM00919	Malic enzyme, NAD binding domain
C2R01_RS08170	SM01274	C2R01_RS08170
C2R01_RS08195	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS08200	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS08225	SM00052	Putative diguanylate phosphodiesterase
C2R01_RS08225	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2R01_RS08225	SM00091	PAS domain
C2R01_RS08225	SM00267	diguanylate cyclase
C2R01_RS08230	SM00267	diguanylate cyclase
C2R01_RS08260	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS08275	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS08325	SM00530	Helix-turn-helix XRE-family like proteins 
C2R01_RS08330	SM00869	Autotransporter beta-domain
C2R01_RS08350	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS08370	SM01133	C2R01_RS08370
C2R01_RS08405	SM00267	diguanylate cyclase
C2R01_RS08445	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2R01_RS08450	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS08475	SM00267	diguanylate cyclase
C2R01_RS08500	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2R01_RS08500	SM00895	C2R01_RS08500
C2R01_RS08525	SM00857	Resolvase, N terminal domain
C2R01_RS08575	SM00357	Cold shock protein domain
C2R01_RS08600	SM00357	Cold shock protein domain
C2R01_RS08605	SM00357	Cold shock protein domain
C2R01_RS08615	SM00507	HNH nucleases
C2R01_RS08670	SM00530	Helix-turn-helix XRE-family like proteins 
C2R01_RS08730	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2R01_RS08765	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2R01_RS08770	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2R01_RS08860	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
C2R01_RS08860	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
C2R01_RS08890	SM00448	cheY-homologous receiver domain
C2R01_RS08890	SM00862	Transcriptional regulatory protein, C terminal
C2R01_RS08895	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2R01_RS08895	SM00387	Histidine kinase-like ATPases
C2R01_RS08895	SM00388	His Kinase A (phosphoacceptor) domain
C2R01_RS08950	SM00354	helix_turn _helix lactose operon repressor
C2R01_RS09015	SM00900	C2R01_RS09015
C2R01_RS09025	SM00478	endonuclease III
C2R01_RS09025	SM00525	C2R01_RS09025
C2R01_RS09050	SM00363	S4 RNA-binding domain
C2R01_RS09075	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2R01_RS09125	SM00479	C2R01_RS09125
C2R01_RS09130	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS09130	SM00487	DEAD-like helicases superfamily
C2R01_RS09130	SM00490	helicase superfamily c-terminal domain
C2R01_RS09165	SM00354	helix_turn _helix lactose operon repressor
C2R01_RS09240	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
C2R01_RS09265	SM00257	Lysin motif
C2R01_RS09285	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS09355	SM00882	Coenzyme A transferase
C2R01_RS09365	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS09375	SM00893	Electron transfer flavoprotein domain
C2R01_RS09380	SM00893	Electron transfer flavoprotein domain
C2R01_RS09440	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS09455	SM00411	bacterial (prokaryotic) histone like domain
C2R01_RS09460	SM00873	B3/4 domain
C2R01_RS09460	SM00874	tRNA synthetase B5 domain
C2R01_RS09460	SM00896	Ferredoxin-fold anticodon binding domain
C2R01_RS09490	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C2R01_RS09560	SM01060	C2R01_RS09560
C2R01_RS09575	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS09610	SM00465	GIY-YIG type nucleases (URI domain)
C2R01_RS09690	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS09695	SM00450	Rhodanese Homology Domain
C2R01_RS09715	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C2R01_RS09725	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C2R01_RS09725	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C2R01_RS09725	SM00493	C2R01_RS09725
C2R01_RS09755	SM00870	C2R01_RS09755
C2R01_RS09770	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2R01_RS09770	SM01134	C2R01_RS09770
C2R01_RS09790	SM00829	Enoylreductase
C2R01_RS09815	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C2R01_RS09835	SM00763	PrkA AAA domain
C2R01_RS09845	SM00267	diguanylate cyclase
C2R01_RS09850	SM00267	diguanylate cyclase
C2R01_RS09870	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS09890	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2R01_RS09890	SM00267	diguanylate cyclase
C2R01_RS09930	SM01329	C2R01_RS09930
C2R01_RS09950	SM00341	Helicase and RNase D C-terminal
C2R01_RS09950	SM00474	3'-5' exonuclease
C2R01_RS09970	SM00487	DEAD-like helicases superfamily
C2R01_RS09970	SM00491	C2R01_RS09970
C2R01_RS10005	SM00052	Putative diguanylate phosphodiesterase
C2R01_RS10010	SM01091	Transporter associated domain
C2R01_RS10060	SM00357	Cold shock protein domain
C2R01_RS10090	SM00346	helix_turn_helix isocitrate lyase regulation
C2R01_RS10105	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2R01_RS10105	SM00245	tail specific protease
C2R01_RS10110	SM00945	ProQ/FINO family
C2R01_RS10115	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2R01_RS10175	SM00479	C2R01_RS10175
C2R01_RS10235	SM00257	Lysin motif
C2R01_RS10245	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS10255	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS10260	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C2R01_RS10345	SM00836	DALR anticodon binding domain
C2R01_RS10345	SM01016	Arginyl tRNA synthetase N terminal dom
C2R01_RS10375	SM00448	cheY-homologous receiver domain
C2R01_RS10380	SM00448	cheY-homologous receiver domain
C2R01_RS10385	SM00138	Methyltransferase, chemotaxis proteins 
C2R01_RS10390	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2R01_RS10390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2R01_RS10390	SM00319	Homologues of the ligand binding domain of Tar
C2R01_RS10395	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2R01_RS10395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2R01_RS10395	SM00319	Homologues of the ligand binding domain of Tar
C2R01_RS10400	SM00260	Two component signalling adaptor domain
C2R01_RS10405	SM00073	Histidine Phosphotransfer domain
C2R01_RS10405	SM00260	Two component signalling adaptor domain
C2R01_RS10405	SM00387	Histidine kinase-like ATPases
C2R01_RS10405	SM01231	C2R01_RS10405
C2R01_RS10460	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS10535	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C2R01_RS10535	SM00465	GIY-YIG type nucleases (URI domain)
C2R01_RS10540	SM00421	helix_turn_helix, Lux Regulon
C2R01_RS10540	SM00448	cheY-homologous receiver domain
C2R01_RS10550	SM00421	helix_turn_helix, Lux Regulon
C2R01_RS10555	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS10570	SM00062	Bacterial periplasmic substrate-binding proteins
C2R01_RS10570	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2R01_RS10610	SM00642	Alpha-amylase domain
C2R01_RS10680	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS10730	SM00421	helix_turn_helix, Lux Regulon
C2R01_RS10750	SM00267	diguanylate cyclase
C2R01_RS10785	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2R01_RS10810	SM00387	Histidine kinase-like ATPases
C2R01_RS10810	SM00388	His Kinase A (phosphoacceptor) domain
C2R01_RS10815	SM00448	cheY-homologous receiver domain
C2R01_RS10815	SM00862	Transcriptional regulatory protein, C terminal
C2R01_RS10820	SM00095	Transthyretin
C2R01_RS10865	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
C2R01_RS10865	SM00634	Bacterial Ig-like domain (group 1)
C2R01_RS10995	SM00869	Autotransporter beta-domain
C2R01_RS11050	SM00871	Bacterial transcription activator, effector binding domain
C2R01_RS11055	SM00936	Penicillin-binding protein 5, C-terminal domain 
C2R01_RS11060	SM00479	C2R01_RS11060
C2R01_RS11160	SM00984	UDP binding domain
C2R01_RS11165	SM01350	C2R01_RS11165
C2R01_RS11340	SM00226	Low molecular weight phosphatase family
C2R01_RS11350	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2R01_RS11350	SM01091	Transporter associated domain
C2R01_RS11370	SM00052	Putative diguanylate phosphodiesterase
C2R01_RS11370	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2R01_RS11370	SM00091	PAS domain
C2R01_RS11370	SM00267	diguanylate cyclase
C2R01_RS11375	SM00478	endonuclease III
C2R01_RS11375	SM01009	AlkA N-terminal domain
C2R01_RS11405	SM00327	von Willebrand factor (vWF) type A domain
C2R01_RS11440	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2R01_RS11440	SM00387	Histidine kinase-like ATPases
C2R01_RS11440	SM00388	His Kinase A (phosphoacceptor) domain
C2R01_RS11445	SM00448	cheY-homologous receiver domain
C2R01_RS11445	SM00862	Transcriptional regulatory protein, C terminal
C2R01_RS11480	SM00046	Diacylglycerol kinase catalytic domain (presumed)
C2R01_RS11485	SM01134	C2R01_RS11485
C2R01_RS11500	SM00829	Enoylreductase
C2R01_RS11530	SM01133	C2R01_RS11530
C2R01_RS11550	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2R01_RS11550	SM00866	C2R01_RS11550
C2R01_RS11555	SM00641	Glycosyl hydrolases family 25
C2R01_RS11625	SM00773	Proposed nucleic acid binding domain
C2R01_RS11650	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS11660	SM00327	von Willebrand factor (vWF) type A domain
C2R01_RS11680	SM00448	cheY-homologous receiver domain
C2R01_RS11680	SM00850	LytTr DNA-binding domain
C2R01_RS11685	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2R01_RS11690	SM00422	helix_turn_helix, mercury resistance
C2R01_RS11705	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS11720	SM01217	C2R01_RS11720
C2R01_RS11815	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS11825	SM00354	helix_turn _helix lactose operon repressor
C2R01_RS11890	SM00518	AP endonuclease family 2
C2R01_RS11910	SM00100	Cyclic nucleotide-monophosphate binding domain
C2R01_RS11955	SM00841	Elongation factor P, C-terminal
C2R01_RS11955	SM01185	C2R01_RS11955
C2R01_RS11965	SM00833	Cobalamin synthesis protein cobW C-terminal domain
C2R01_RS11970	SM00014	Acid phosphatase homologues
C2R01_RS11980	SM00052	Putative diguanylate phosphodiesterase
C2R01_RS12000	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS12020	SM00363	S4 RNA-binding domain
C2R01_RS12030	SM00487	DEAD-like helicases superfamily
C2R01_RS12030	SM00490	helicase superfamily c-terminal domain
C2R01_RS12065	SM00869	Autotransporter beta-domain
C2R01_RS12090	SM00421	helix_turn_helix, Lux Regulon
C2R01_RS12090	SM00448	cheY-homologous receiver domain
C2R01_RS12130	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS12155	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2R01_RS12185	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS12195	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS12220	SM00387	Histidine kinase-like ATPases
C2R01_RS12225	SM00421	helix_turn_helix, Lux Regulon
C2R01_RS12225	SM00448	cheY-homologous receiver domain
C2R01_RS12230	SM00387	Histidine kinase-like ATPases
C2R01_RS12230	SM00388	His Kinase A (phosphoacceptor) domain
C2R01_RS12230	SM00448	cheY-homologous receiver domain
C2R01_RS12235	SM00091	PAS domain
C2R01_RS12235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2R01_RS12235	SM00387	Histidine kinase-like ATPases
C2R01_RS12235	SM00388	His Kinase A (phosphoacceptor) domain
C2R01_RS12240	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS12240	SM00448	cheY-homologous receiver domain
C2R01_RS12245	SM00882	Coenzyme A transferase
C2R01_RS12250	SM00882	Coenzyme A transferase
C2R01_RS12280	SM01359	C2R01_RS12280
C2R01_RS12280	SM01360	C2R01_RS12280
C2R01_RS12295	SM00434	DNA Topoisomerase IV
C2R01_RS12305	SM00869	Autotransporter beta-domain
C2R01_RS12385	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2R01_RS12390	SM00346	helix_turn_helix isocitrate lyase regulation
C2R01_RS12395	SM00852	Probable molybdopterin binding domain
C2R01_RS12460	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2R01_RS12495	SM00849	Metallo-beta-lactamase superfamily
C2R01_RS12505	SM00327	von Willebrand factor (vWF) type A domain
C2R01_RS12570	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2R01_RS12570	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
C2R01_RS12575	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
C2R01_RS12615	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2R01_RS12675	SM00905	Dihydroneopterin aldolase
C2R01_RS12690	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS12705	SM00062	Bacterial periplasmic substrate-binding proteins
C2R01_RS12710	SM00062	Bacterial periplasmic substrate-binding proteins
C2R01_RS12755	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2R01_RS12780	SM00825	Beta-ketoacyl synthase
C2R01_RS12820	SM00463	Small MutS-related domain
C2R01_RS13025	SM00421	helix_turn_helix, Lux Regulon
C2R01_RS13025	SM00448	cheY-homologous receiver domain
C2R01_RS13030	SM00062	Bacterial periplasmic substrate-binding proteins
C2R01_RS13030	SM00073	Histidine Phosphotransfer domain
C2R01_RS13030	SM00387	Histidine kinase-like ATPases
C2R01_RS13030	SM00388	His Kinase A (phosphoacceptor) domain
C2R01_RS13030	SM00448	cheY-homologous receiver domain
C2R01_RS13090	SM00387	Histidine kinase-like ATPases
C2R01_RS13095	SM00448	cheY-homologous receiver domain
C2R01_RS13095	SM00850	LytTr DNA-binding domain
C2R01_RS13100	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS13160	SM00052	Putative diguanylate phosphodiesterase
C2R01_RS13160	SM00267	diguanylate cyclase
C2R01_RS13255	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C2R01_RS13255	SM00292	breast cancer carboxy-terminal domain
C2R01_RS13255	SM00532	Ligase N family
C2R01_RS13260	SM00771	ZipA, C-terminal domain (FtsZ-binding)
C2R01_RS13300	SM00773	Proposed nucleic acid binding domain
C2R01_RS13310	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS13335	SM00822	C2R01_RS13335
C2R01_RS13380	SM00646	C2R01_RS13380
C2R01_RS13390	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS13395	SM00877	C2R01_RS13395
C2R01_RS13400	SM00877	C2R01_RS13400
C2R01_RS13490	SM00877	C2R01_RS13490
C2R01_RS13515	SM00877	C2R01_RS13515
C2R01_RS13520	SM00919	Malic enzyme, NAD binding domain
C2R01_RS13520	SM01274	C2R01_RS13520
C2R01_RS13530	SM00861	Transketolase, pyrimidine binding domain
C2R01_RS13550	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2R01_RS13550	SM00387	Histidine kinase-like ATPases
C2R01_RS13605	SM01130	C2R01_RS13605
C2R01_RS13670	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2R01_RS13670	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS13740	SM00052	Putative diguanylate phosphodiesterase
C2R01_RS13740	SM00267	diguanylate cyclase
C2R01_RS13775	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2R01_RS13775	SM01240	C2R01_RS13775
C2R01_RS13795	SM00564	beta-propeller repeat
C2R01_RS13815	SM00530	Helix-turn-helix XRE-family like proteins 
C2R01_RS13830	SM00562	C2R01_RS13830
C2R01_RS13840	SM01359	C2R01_RS13840
C2R01_RS13840	SM01360	C2R01_RS13840
C2R01_RS13845	SM00450	Rhodanese Homology Domain
C2R01_RS13875	SM00271	DnaJ molecular chaperone homology domain
C2R01_RS13965	SM00829	Enoylreductase
C2R01_RS13975	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS13985	SM00028	Tetratricopeptide repeats
C2R01_RS14005	SM00938	Nitrogen regulatory protein P-II
C2R01_RS14010	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS14010	SM00448	cheY-homologous receiver domain
C2R01_RS14020	SM00387	Histidine kinase-like ATPases
C2R01_RS14020	SM00388	His Kinase A (phosphoacceptor) domain
C2R01_RS14025	SM01211	C2R01_RS14025
C2R01_RS14035	SM00062	Bacterial periplasmic substrate-binding proteins
C2R01_RS14095	SM00358	Double-stranded RNA binding motif
C2R01_RS14095	SM00535	Ribonuclease III family
C2R01_RS14145	SM00487	DEAD-like helicases superfamily
C2R01_RS14145	SM00490	helicase superfamily c-terminal domain
C2R01_RS14165	SM00986	Uracil DNA glycosylase superfamily
C2R01_RS14165	SM00987	UreE urease accessory protein, C-terminal domain 
C2R01_RS14170	SM00967	RNA 2'-O ribose methyltransferase substrate binding
C2R01_RS14185	SM01144	C2R01_RS14185
C2R01_RS14190	SM00881	CoA binding domain
C2R01_RS14195	SM00155	Phospholipase D. Active site motifs.
C2R01_RS14235	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS14235	SM01086	C-terminal, D2-small domain, of ClpB protein
C2R01_RS14245	SM00363	S4 RNA-binding domain
C2R01_RS14270	SM00830	Chorismate mutase type II
C2R01_RS14275	SM00830	Chorismate mutase type II
C2R01_RS14295	SM00267	diguanylate cyclase
C2R01_RS14325	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS14325	SM00962	SRP54-type protein, GTPase domain
C2R01_RS14325	SM00963	SRP54-type protein, helical bundle domain
C2R01_RS14335	SM01091	Transporter associated domain
C2R01_RS14410	SM00487	DEAD-like helicases superfamily
C2R01_RS14410	SM00490	helicase superfamily c-terminal domain
C2R01_RS14510	SM00869	Autotransporter beta-domain
C2R01_RS14580	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2R01_RS14580	SM00895	C2R01_RS14580
C2R01_RS14585	SM00257	Lysin motif
C2R01_RS14585	SM00749	bacterial OsmY and nodulation domain
C2R01_RS14595	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2R01_RS14600	SM00450	Rhodanese Homology Domain
C2R01_RS14605	SM00528	Domain in histone-like proteins of HNS family
C2R01_RS14650	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS14680	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2R01_RS14745	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C2R01_RS14755	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS14795	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2R01_RS14795	SM01134	C2R01_RS14795
C2R01_RS14805	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2R01_RS14805	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS14810	SM00849	Metallo-beta-lactamase superfamily
C2R01_RS14830	SM00354	helix_turn _helix lactose operon repressor
C2R01_RS14915	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2R01_RS14915	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS14925	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
C2R01_RS14925	SM00534	ATPase domain of DNA mismatch repair MUTS family
C2R01_RS14935	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2R01_RS14935	SM01134	C2R01_RS14935
C2R01_RS14950	SM01007	Class II Aldolase and Adducin N-terminal domain
C2R01_RS14970	SM00257	Lysin motif
C2R01_RS15040	SM01101	C2R01_RS15040
C2R01_RS15065	SM00487	DEAD-like helicases superfamily
C2R01_RS15065	SM00490	helicase superfamily c-terminal domain
C2R01_RS15115	SM00893	Electron transfer flavoprotein domain
C2R01_RS15160	SM01192	C2R01_RS15160
C2R01_RS15160	SM01193	C2R01_RS15160
C2R01_RS15180	SM00966	SpoVT / AbrB like domain 
C2R01_RS15185	SM00954	Region found in RelA / SpoT proteins
C2R01_RS15195	SM00073	Histidine Phosphotransfer domain
C2R01_RS15195	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2R01_RS15195	SM00387	Histidine kinase-like ATPases
C2R01_RS15195	SM00388	His Kinase A (phosphoacceptor) domain
C2R01_RS15195	SM00448	cheY-homologous receiver domain
C2R01_RS15200	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2R01_RS15205	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2R01_RS15255	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
C2R01_RS15255	SM00475	5'-3' exonuclease
C2R01_RS15265	SM01007	Class II Aldolase and Adducin N-terminal domain
C2R01_RS15290	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2R01_RS15290	SM01134	C2R01_RS15290
C2R01_RS15330	SM00925	MltA specific insert domain
C2R01_RS15355	SM00646	C2R01_RS15355
C2R01_RS15370	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS15420	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2R01_RS15430	SM00927	DNA mismatch repair enzyme MutH
C2R01_RS15455	SM00563	Phosphate acyltransferases
C2R01_RS15460	SM00354	helix_turn _helix lactose operon repressor
C2R01_RS15510	SM00862	Transcriptional regulatory protein, C terminal
C2R01_RS15540	SM00028	Tetratricopeptide repeats
C2R01_RS15540	SM00862	Transcriptional regulatory protein, C terminal
C2R01_RS15555	SM00421	helix_turn_helix, Lux Regulon
C2R01_RS15600	SM00257	Lysin motif
C2R01_RS15610	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
C2R01_RS15615	SM01092	CO dehydrogenase flavoprotein C-terminal domain
C2R01_RS15625	SM00091	PAS domain
C2R01_RS15625	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS15680	SM01092	CO dehydrogenase flavoprotein C-terminal domain
C2R01_RS15685	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
C2R01_RS15785	SM01022	C2R01_RS15785
C2R01_RS15825	SM01011	Aminopeptidase P, N-terminal domain
C2R01_RS15935	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C2R01_RS15975	SM00861	Transketolase, pyrimidine binding domain
C2R01_RS16020	SM00731	SprT homologues.
C2R01_RS16045	SM00732	Likely ribonuclease with RNase H fold.
C2R01_RS16050	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS16065	SM01152	C2R01_RS16065
C2R01_RS16075	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2R01_RS16085	SM00870	C2R01_RS16085
C2R01_RS16110	SM00478	endonuclease III
C2R01_RS16110	SM00525	C2R01_RS16110
C2R01_RS16175	SM01276	C2R01_RS16175
C2R01_RS16215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2R01_RS16215	SM00895	C2R01_RS16215
C2R01_RS16365	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS16390	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2R01_RS16400	SM00563	Phosphate acyltransferases
C2R01_RS16405	SM00434	DNA Topoisomerase IV
C2R01_RS16420	SM00530	Helix-turn-helix XRE-family like proteins 
C2R01_RS16430	SM00871	Bacterial transcription activator, effector binding domain
C2R01_RS16440	SM00448	cheY-homologous receiver domain
C2R01_RS16440	SM00862	Transcriptional regulatory protein, C terminal
C2R01_RS16445	SM00387	Histidine kinase-like ATPases
C2R01_RS16445	SM00388	His Kinase A (phosphoacceptor) domain
C2R01_RS16470	SM00387	Histidine kinase-like ATPases
C2R01_RS16470	SM00433	TopoisomeraseII
C2R01_RS16585	SM00244	prohibitin homologues
C2R01_RS16615	SM01118	C2R01_RS16615
C2R01_RS16625	SM00287	Bacterial SH3 domain homologues
C2R01_RS16640	SM00905	Dihydroneopterin aldolase
C2R01_RS16645	SM01207	C2R01_RS16645
C2R01_RS16690	SM00400	zinc finger
C2R01_RS16690	SM00493	C2R01_RS16690
C2R01_RS16690	SM00766	DNA primase DnaG DnaB-binding
C2R01_RS16725	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2R01_RS16725	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2R01_RS16750	SM00354	helix_turn _helix lactose operon repressor
C2R01_RS16755	SM01038	Beta galactosidase small chain
C2R01_RS16785	SM00530	Helix-turn-helix XRE-family like proteins 
C2R01_RS16835	SM00858	C2R01_RS16835
C2R01_RS16850	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2R01_RS16850	SM00895	C2R01_RS16850
C2R01_RS17020	SM00858	C2R01_RS17020
C2R01_RS17035	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2R01_RS17035	SM01134	C2R01_RS17035
C2R01_RS17135	SM00749	bacterial OsmY and nodulation domain
C2R01_RS17145	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2R01_RS17160	SM00465	GIY-YIG type nucleases (URI domain)
C2R01_RS17195	SM00487	DEAD-like helicases superfamily
C2R01_RS17195	SM00490	helicase superfamily c-terminal domain
C2R01_RS17205	SM00028	Tetratricopeptide repeats
C2R01_RS17210	SM00316	Ribosomal protein S1-like RNA-binding domain
C2R01_RS17210	SM00322	K homology RNA-binding domain
C2R01_RS17215	SM01387	C2R01_RS17215
C2R01_RS17235	SM00316	Ribosomal protein S1-like RNA-binding domain
C2R01_RS17280	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS17290	SM01103	C2R01_RS17290
C2R01_RS17365	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS17395	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS17440	SM00073	Histidine Phosphotransfer domain
C2R01_RS17440	SM00091	PAS domain
C2R01_RS17440	SM00387	Histidine kinase-like ATPases
C2R01_RS17440	SM00388	His Kinase A (phosphoacceptor) domain
C2R01_RS17440	SM00448	cheY-homologous receiver domain
C2R01_RS17445	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2R01_RS17535	SM01130	C2R01_RS17535
C2R01_RS17540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2R01_RS17540	SM00895	C2R01_RS17540
C2R01_RS17590	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2R01_RS17595	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2R01_RS17650	SM00316	Ribosomal protein S1-like RNA-binding domain
C2R01_RS17685	SM00052	Putative diguanylate phosphodiesterase
C2R01_RS17685	SM00267	diguanylate cyclase
C2R01_RS17690	SM00829	Enoylreductase
C2R01_RS17705	SM00878	Biotin carboxylase C-terminal domain
C2R01_RS17780	SM00062	Bacterial periplasmic substrate-binding proteins
C2R01_RS17795	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS17900	SM00422	helix_turn_helix, mercury resistance
C2R01_RS17915	SM00662	RNA polymerases D
C2R01_RS17920	SM00363	S4 RNA-binding domain
C2R01_RS17920	SM01390	C2R01_RS17920
C2R01_RS17985	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
C2R01_RS17990	SM01374	C2R01_RS17990
C2R01_RS18010	SM00322	K homology RNA-binding domain
C2R01_RS18025	SM01382	C2R01_RS18025
C2R01_RS18025	SM01383	C2R01_RS18025
C2R01_RS18045	SM01403	C2R01_RS18045
C2R01_RS18070	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS18130	SM00495	Chitin-binding domain type 3
C2R01_RS18145	SM00838	Elongation factor G C-terminus
C2R01_RS18145	SM00889	Elongation factor G, domain IV
C2R01_RS18215	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS18245	SM00100	Cyclic nucleotide-monophosphate binding domain
C2R01_RS18245	SM00419	helix_turn_helix, cAMP Regulatory protein
C2R01_RS18335	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2R01_RS18335	SM00866	C2R01_RS18335
C2R01_RS18420	SM00965	Secretin and TonB N terminus short domain
C2R01_RS18465	SM00363	S4 RNA-binding domain
C2R01_RS18490	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2R01_RS18490	SM00387	Histidine kinase-like ATPases
C2R01_RS18490	SM00388	His Kinase A (phosphoacceptor) domain
C2R01_RS18495	SM00448	cheY-homologous receiver domain
C2R01_RS18495	SM00862	Transcriptional regulatory protein, C terminal
C2R01_RS18510	SM00316	Ribosomal protein S1-like RNA-binding domain
C2R01_RS18510	SM00732	Likely ribonuclease with RNase H fold.
C2R01_RS18520	SM00899	C2R01_RS18520
C2R01_RS18575	SM00421	helix_turn_helix, Lux Regulon
C2R01_RS18590	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS18605	SM00450	Rhodanese Homology Domain
C2R01_RS18635	SM00642	Alpha-amylase domain
C2R01_RS18640	SM00642	Alpha-amylase domain
C2R01_RS18645	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2R01_RS18665	SM00354	helix_turn _helix lactose operon repressor
C2R01_RS18730	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS18750	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS18755	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS18795	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS18800	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS18800	SM00962	SRP54-type protein, GTPase domain
C2R01_RS18800	SM00963	SRP54-type protein, helical bundle domain
C2R01_RS18875	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS18880	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS18915	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS19005	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2R01_RS19045	SM00421	helix_turn_helix, Lux Regulon
C2R01_RS19095	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS19100	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS19110	SM01235	C2R01_RS19110
C2R01_RS19120	SM00421	helix_turn_helix, Lux Regulon
C2R01_RS19145	SM00052	Putative diguanylate phosphodiesterase
C2R01_RS19175	SM00052	Putative diguanylate phosphodiesterase
C2R01_RS19175	SM00267	diguanylate cyclase
C2R01_RS19180	SM00028	Tetratricopeptide repeats
C2R01_RS19245	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS19250	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS19335	SM00530	Helix-turn-helix XRE-family like proteins 
C2R01_RS19340	SM00357	Cold shock protein domain
C2R01_RS19400	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS19410	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS19415	SM00047	Lysozyme subfamily 2
C2R01_RS19420	SM00642	Alpha-amylase domain
C2R01_RS19435	SM00346	helix_turn_helix isocitrate lyase regulation
C2R01_RS19470	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
C2R01_RS19480	SM01007	Class II Aldolase and Adducin N-terminal domain
C2R01_RS19620	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2R01_RS19620	SM00895	C2R01_RS19620
C2R01_RS19635	SM00971	Serine acetyltransferase, N-terminal
C2R01_RS19655	SM00450	Rhodanese Homology Domain
C2R01_RS19685	SM00829	Enoylreductase
C2R01_RS19780	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
C2R01_RS19780	SM01232	C2R01_RS19780
C2R01_RS19845	SM00532	Ligase N family
C2R01_RS19850	SM00072	Guanylate kinase homologues.
C2R01_RS19855	SM01409	C2R01_RS19855
C2R01_RS19860	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2R01_RS19860	SM00954	Region found in RelA / SpoT proteins
C2R01_RS19870	SM00487	DEAD-like helicases superfamily
C2R01_RS19870	SM00490	helicase superfamily c-terminal domain
C2R01_RS19970	SM00387	Histidine kinase-like ATPases
C2R01_RS19975	SM00421	helix_turn_helix, Lux Regulon
C2R01_RS19975	SM00448	cheY-homologous receiver domain
C2R01_RS20055	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS20070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2R01_RS20070	SM00866	C2R01_RS20070
C2R01_RS20110	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2R01_RS20125	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2R01_RS20125	SM00895	C2R01_RS20125
C2R01_RS20145	SM00387	Histidine kinase-like ATPases
C2R01_RS20145	SM00433	TopoisomeraseII
C2R01_RS20155	SM00480	DNA polymerase III beta subunit
C2R01_RS20160	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS20160	SM00760	Bacterial dnaA protein helix-turn-helix domain
C2R01_RS20180	SM01234	C2R01_RS20180
C2R01_RS20275	SM01061	CAT RNA binding domain
C2R01_RS20285	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS20320	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS20365	SM01228	C2R01_RS20365
C2R01_RS20375	SM00344	helix_turn_helix ASNC type
C2R01_RS20385	SM00327	von Willebrand factor (vWF) type A domain
C2R01_RS20390	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS20405	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS20425	SM00354	helix_turn _helix lactose operon repressor
C2R01_RS20435	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2R01_RS20435	SM00895	C2R01_RS20435
C2R01_RS20480	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS20560	SM00487	DEAD-like helicases superfamily
C2R01_RS20560	SM00490	helicase superfamily c-terminal domain
C2R01_RS20575	SM00357	Cold shock protein domain
C2R01_RS20575	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS20575	SM00959	Rho termination factor, N-terminal domain
C2R01_RS20600	SM00984	UDP binding domain
C2R01_RS20710	SM01219	C2R01_RS20710
C2R01_RS20780	SM00341	Helicase and RNase D C-terminal
C2R01_RS20780	SM00487	DEAD-like helicases superfamily
C2R01_RS20780	SM00490	helicase superfamily c-terminal domain
C2R01_RS20780	SM00956	C2R01_RS20780
C2R01_RS20875	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
C2R01_RS20975	SM00563	Phosphate acyltransferases
C2R01_RS20985	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
C2R01_RS20985	SM00474	3'-5' exonuclease
C2R01_RS20985	SM00475	5'-3' exonuclease
C2R01_RS20985	SM00482	DNA polymerase A domain
C2R01_RS21000	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2R01_RS21010	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS21010	SM00448	cheY-homologous receiver domain
C2R01_RS21015	SM00091	PAS domain
C2R01_RS21015	SM00387	Histidine kinase-like ATPases
C2R01_RS21015	SM00388	His Kinase A (phosphoacceptor) domain
C2R01_RS21020	SM01230	C2R01_RS21020
C2R01_RS21035	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2R01_RS21035	SM00866	C2R01_RS21035
C2R01_RS21080	SM01133	C2R01_RS21080
C2R01_RS21095	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2R01_RS21095	SM01134	C2R01_RS21095
C2R01_RS21190	SM01007	Class II Aldolase and Adducin N-terminal domain
C2R01_RS21205	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS21210	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS21240	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2R01_RS21240	SM00387	Histidine kinase-like ATPases
C2R01_RS21240	SM00388	His Kinase A (phosphoacceptor) domain
C2R01_RS21245	SM00448	cheY-homologous receiver domain
C2R01_RS21245	SM00862	Transcriptional regulatory protein, C terminal
C2R01_RS21335	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS21335	SM01086	C-terminal, D2-small domain, of ClpB protein
C2R01_RS21350	SM00354	helix_turn _helix lactose operon repressor
C2R01_RS21355	SM00487	DEAD-like helicases superfamily
C2R01_RS21355	SM00490	helicase superfamily c-terminal domain
C2R01_RS21445	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS21470	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2R01_RS21600	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
C2R01_RS21600	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
C2R01_RS21605	SM00649	Ribosomal protein L11/L12
C2R01_RS21635	SM00663	RNA polymerase I subunit A N-terminus
C2R01_RS21645	SM00876	Biotin and Thiamin Synthesis associated domain
C2R01_RS21700	SM00411	bacterial (prokaryotic) histone like domain
C2R01_RS21720	SM00387	Histidine kinase-like ATPases
C2R01_RS21720	SM00388	His Kinase A (phosphoacceptor) domain
C2R01_RS21725	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS21725	SM00448	cheY-homologous receiver domain
C2R01_RS21730	SM01209	C2R01_RS21730
C2R01_RS21730	SM01210	C2R01_RS21730
C2R01_RS21735	SM00798	AICARFT/IMPCHase bienzyme
C2R01_RS21735	SM00851	MGS-like domain
C2R01_RS21795	SM00248	ankyrin repeats
C2R01_RS21800	SM00346	helix_turn_helix isocitrate lyase regulation
C2R01_RS21805	SM01018	B12 binding domain
C2R01_RS21820	SM00363	S4 RNA-binding domain
C2R01_RS21905	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS21945	SM00563	Phosphate acyltransferases
C2R01_RS21995	SM00829	Enoylreductase
C2R01_RS22000	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS22005	SM01005	Alanine racemase, C-terminal domain
C2R01_RS22055	SM00052	Putative diguanylate phosphodiesterase
C2R01_RS22060	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS22065	SM00422	helix_turn_helix, mercury resistance
C2R01_RS22150	SM00028	Tetratricopeptide repeats
C2R01_RS22165	SM00671	Sel1-like repeats.
C2R01_RS22195	SM00849	Metallo-beta-lactamase superfamily
C2R01_RS22215	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS22255	SM00072	Guanylate kinase homologues.
C2R01_RS22265	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS22270	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS22295	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2R01_RS22295	SM00866	C2R01_RS22295
C2R01_RS22310	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS22350	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2R01_RS22350	SM00387	Histidine kinase-like ATPases
C2R01_RS22350	SM00388	His Kinase A (phosphoacceptor) domain
C2R01_RS22355	SM00448	cheY-homologous receiver domain
C2R01_RS22355	SM00862	Transcriptional regulatory protein, C terminal
C2R01_RS22370	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS22380	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS22415	SM00448	cheY-homologous receiver domain
C2R01_RS22420	SM00091	PAS domain
C2R01_RS22420	SM00387	Histidine kinase-like ATPases
C2R01_RS22470	SM00862	Transcriptional regulatory protein, C terminal
C2R01_RS22520	SM00883	Chaperonin 10 Kd subunit
C2R01_RS22545	SM00841	Elongation factor P, C-terminal
C2R01_RS22545	SM01185	C2R01_RS22545
C2R01_RS22630	SM00479	C2R01_RS22630
C2R01_RS22670	SM00646	C2R01_RS22670
C2R01_RS22675	SM00853	MutL C terminal dimerisation domain
C2R01_RS22675	SM01340	C2R01_RS22675
C2R01_RS22695	SM00244	prohibitin homologues
C2R01_RS22700	SM00244	prohibitin homologues
C2R01_RS22710	SM00788	Adenylosuccinate synthetase
C2R01_RS22720	SM00316	Ribosomal protein S1-like RNA-binding domain
C2R01_RS22720	SM00357	Cold shock protein domain
C2R01_RS22720	SM00955	C2R01_RS22720
C2R01_RS22725	SM00967	RNA 2'-O ribose methyltransferase substrate binding
C2R01_RS22790	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2R01_RS22790	SM01134	C2R01_RS22790
C2R01_RS22815	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
C2R01_RS22825	SM01007	Class II Aldolase and Adducin N-terminal domain
C2R01_RS22940	SM01091	Transporter associated domain
C2R01_RS22970	SM00966	SpoVT / AbrB like domain 
C2R01_RS22990	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS23040	SM00642	Alpha-amylase domain
C2R01_RS23050	SM00354	helix_turn _helix lactose operon repressor
C2R01_RS23060	SM00831	Cation transporter/ATPase, N-terminus
C2R01_RS23095	SM00822	C2R01_RS23095
C2R01_RS23165	SM00354	helix_turn _helix lactose operon repressor
C2R01_RS23190	SM00829	Enoylreductase
C2R01_RS23295	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS23315	SM00965	Secretin and TonB N terminus short domain
C2R01_RS23360	SM01130	C2R01_RS23360
C2R01_RS23365	SM00346	helix_turn_helix isocitrate lyase regulation
C2R01_RS23370	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2R01_RS23370	SM01134	C2R01_RS23370
C2R01_RS23545	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2R01_RS23545	SM00895	C2R01_RS23545
C2R01_RS23640	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2R01_RS23670	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS23690	SM00487	DEAD-like helicases superfamily
C2R01_RS23690	SM00490	helicase superfamily c-terminal domain
C2R01_RS23700	SM00833	Cobalamin synthesis protein cobW C-terminal domain
C2R01_RS23720	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2R01_RS23720	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2R01_RS23720	SM00319	Homologues of the ligand binding domain of Tar
C2R01_RS23730	SM00895	C2R01_RS23730
C2R01_RS23735	SM00829	Enoylreductase
C2R01_RS23750	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS23770	SM00421	helix_turn_helix, Lux Regulon
C2R01_RS23775	SM00421	helix_turn_helix, Lux Regulon
C2R01_RS23830	SM00749	bacterial OsmY and nodulation domain
C2R01_RS23860	SM01133	C2R01_RS23860
C2R01_RS23865	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
C2R01_RS23900	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS23905	SM00530	Helix-turn-helix XRE-family like proteins 
C2R01_RS23910	SM00382	ATPases associated with a variety of cellular activities
C2R01_RS23935	SM00855	Phosphoglycerate mutase family
C2R01_RS23940	SM00342	helix_turn_helix, arabinose operon control protein
C2R01_RS23940	SM00871	Bacterial transcription activator, effector binding domain
C2R01_RS23950	SM00448	cheY-homologous receiver domain
C2R01_RS23950	SM00862	Transcriptional regulatory protein, C terminal
C2R01_RS23955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2R01_RS23955	SM00387	Histidine kinase-like ATPases
C2R01_RS23955	SM00388	His Kinase A (phosphoacceptor) domain
C2R01_RS23965	SM00448	cheY-homologous receiver domain
C2R01_RS23965	SM00862	Transcriptional regulatory protein, C terminal
