A5955_RS00160 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS00185 SM00507 HNH nucleases A5955_RS00200 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS00240 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS00380 SM00470 ParB-like nuclease domain A5955_RS00505 SM00871 Bacterial transcription activator, effector binding domain A5955_RS00510 SM00936 Penicillin-binding protein 5, C-terminal domain A5955_RS00515 SM00479 A5955_RS00515 A5955_RS00600 SM00984 UDP binding domain A5955_RS00625 SM01350 A5955_RS00625 A5955_RS00780 SM00226 Low molecular weight phosphatase family A5955_RS00790 SM01091 Transporter associated domain A5955_RS00800 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS00820 SM00052 Putative diguanylate phosphodiesterase A5955_RS00820 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A5955_RS00820 SM00091 PAS domain A5955_RS00820 SM00267 diguanylate cyclase A5955_RS00825 SM00478 endonuclease III A5955_RS00825 SM01009 AlkA N-terminal domain A5955_RS00850 SM00327 von Willebrand factor (vWF) type A domain A5955_RS00875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A5955_RS00875 SM00387 Histidine kinase-like ATPases A5955_RS00875 SM00388 His Kinase A (phosphoacceptor) domain A5955_RS00880 SM00448 cheY-homologous receiver domain A5955_RS00880 SM00862 Transcriptional regulatory protein, C terminal A5955_RS00915 SM00046 Diacylglycerol kinase catalytic domain (presumed) A5955_RS00945 SM00354 helix_turn _helix lactose operon repressor A5955_RS00960 SM00420 helix_turn_helix, Deoxyribose operon repressor A5955_RS00960 SM01134 A5955_RS00960 A5955_RS00965 SM00829 Enoylreductase A5955_RS00995 SM01133 A5955_RS00995 A5955_RS01015 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5955_RS01015 SM00866 A5955_RS01015 A5955_RS01020 SM00641 Glycosyl hydrolases family 25 A5955_RS01110 SM00773 Proposed nucleic acid binding domain A5955_RS01130 SM00382 ATPases associated with a variety of cellular activities A5955_RS01140 SM00327 von Willebrand factor (vWF) type A domain A5955_RS01160 SM00448 cheY-homologous receiver domain A5955_RS01160 SM00850 LytTr DNA-binding domain A5955_RS01165 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A5955_RS01170 SM00422 helix_turn_helix, mercury resistance A5955_RS01185 SM00382 ATPases associated with a variety of cellular activities A5955_RS01200 SM01217 A5955_RS01200 A5955_RS01315 SM00382 ATPases associated with a variety of cellular activities A5955_RS01325 SM00354 helix_turn _helix lactose operon repressor A5955_RS01380 SM00518 AP endonuclease family 2 A5955_RS01400 SM00100 Cyclic nucleotide-monophosphate binding domain A5955_RS01445 SM00841 Elongation factor P, C-terminal A5955_RS01445 SM01185 A5955_RS01445 A5955_RS01455 SM00833 Cobalamin synthesis protein cobW C-terminal domain A5955_RS01460 SM00014 Acid phosphatase homologues A5955_RS01470 SM00052 Putative diguanylate phosphodiesterase A5955_RS01490 SM00382 ATPases associated with a variety of cellular activities A5955_RS01505 SM00363 S4 RNA-binding domain A5955_RS01510 SM00487 DEAD-like helicases superfamily A5955_RS01510 SM00490 helicase superfamily c-terminal domain A5955_RS01540 SM00869 Autotransporter beta-domain A5955_RS01550 SM00421 helix_turn_helix, Lux Regulon A5955_RS01550 SM00448 cheY-homologous receiver domain A5955_RS01590 SM00382 ATPases associated with a variety of cellular activities A5955_RS01615 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A5955_RS01645 SM00382 ATPases associated with a variety of cellular activities A5955_RS01655 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS01680 SM00387 Histidine kinase-like ATPases A5955_RS01685 SM00421 helix_turn_helix, Lux Regulon A5955_RS01685 SM00448 cheY-homologous receiver domain A5955_RS01690 SM00387 Histidine kinase-like ATPases A5955_RS01690 SM00388 His Kinase A (phosphoacceptor) domain A5955_RS01690 SM00448 cheY-homologous receiver domain A5955_RS01715 SM01359 A5955_RS01715 A5955_RS01715 SM01360 A5955_RS01715 A5955_RS01730 SM00434 DNA Topoisomerase IV A5955_RS01740 SM00869 Autotransporter beta-domain A5955_RS01825 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A5955_RS01830 SM00346 helix_turn_helix isocitrate lyase regulation A5955_RS01835 SM00852 Probable molybdopterin binding domain A5955_RS01900 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A5955_RS01995 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A5955_RS01995 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A5955_RS02000 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A5955_RS02035 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A5955_RS02100 SM00905 Dihydroneopterin aldolase A5955_RS02115 SM00382 ATPases associated with a variety of cellular activities A5955_RS02130 SM00062 Bacterial periplasmic substrate-binding proteins A5955_RS02135 SM00062 Bacterial periplasmic substrate-binding proteins A5955_RS02180 SM00859 Semialdehyde dehydrogenase, NAD binding domain A5955_RS02200 SM00825 Beta-ketoacyl synthase A5955_RS02240 SM00463 Small MutS-related domain A5955_RS02445 SM01252 A5955_RS02445 A5955_RS02585 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS02600 SM00220 Serine/Threonine protein kinases, catalytic domain A5955_RS02740 SM00857 Resolvase, N terminal domain A5955_RS02760 SM00640 Glycosyl hydrolases family 32 A5955_RS02765 SM00354 helix_turn _helix lactose operon repressor A5955_RS02790 SM00421 helix_turn_helix, Lux Regulon A5955_RS02790 SM00448 cheY-homologous receiver domain A5955_RS02795 SM00062 Bacterial periplasmic substrate-binding proteins A5955_RS02795 SM00073 Histidine Phosphotransfer domain A5955_RS02795 SM00387 Histidine kinase-like ATPases A5955_RS02795 SM00388 His Kinase A (phosphoacceptor) domain A5955_RS02795 SM00448 cheY-homologous receiver domain A5955_RS02850 SM00387 Histidine kinase-like ATPases A5955_RS02855 SM00448 cheY-homologous receiver domain A5955_RS02855 SM00850 LytTr DNA-binding domain A5955_RS02860 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS02920 SM00052 Putative diguanylate phosphodiesterase A5955_RS02920 SM00267 diguanylate cyclase A5955_RS02950 SM01321 A5955_RS02950 A5955_RS03000 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A5955_RS03000 SM00292 breast cancer carboxy-terminal domain A5955_RS03000 SM00532 Ligase N family A5955_RS03005 SM00771 ZipA, C-terminal domain (FtsZ-binding) A5955_RS03050 SM00382 ATPases associated with a variety of cellular activities A5955_RS03070 SM00822 A5955_RS03070 A5955_RS03115 SM00646 A5955_RS03115 A5955_RS03125 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS03130 SM00877 A5955_RS03130 A5955_RS03135 SM00877 A5955_RS03135 A5955_RS03180 SM00877 A5955_RS03180 A5955_RS03205 SM00877 A5955_RS03205 A5955_RS03210 SM00919 Malic enzyme, NAD binding domain A5955_RS03210 SM01274 A5955_RS03210 A5955_RS03220 SM00861 Transketolase, pyrimidine binding domain A5955_RS03240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A5955_RS03240 SM00387 Histidine kinase-like ATPases A5955_RS03300 SM01130 A5955_RS03300 A5955_RS03365 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A5955_RS03365 SM00382 ATPases associated with a variety of cellular activities A5955_RS03425 SM00052 Putative diguanylate phosphodiesterase A5955_RS03425 SM00267 diguanylate cyclase A5955_RS03455 SM00116 Domain in cystathionine beta-synthase and other proteins. A5955_RS03455 SM01240 A5955_RS03455 A5955_RS03475 SM00564 beta-propeller repeat A5955_RS03495 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS03505 SM00562 A5955_RS03505 A5955_RS03525 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A5955_RS03535 SM01359 A5955_RS03535 A5955_RS03535 SM01360 A5955_RS03535 A5955_RS03540 SM00450 Rhodanese Homology Domain A5955_RS03570 SM00271 DnaJ molecular chaperone homology domain A5955_RS03660 SM00829 Enoylreductase A5955_RS03670 SM00382 ATPases associated with a variety of cellular activities A5955_RS03680 SM00028 Tetratricopeptide repeats A5955_RS03700 SM00938 Nitrogen regulatory protein P-II A5955_RS03705 SM00382 ATPases associated with a variety of cellular activities A5955_RS03705 SM00448 cheY-homologous receiver domain A5955_RS03715 SM00387 Histidine kinase-like ATPases A5955_RS03715 SM00388 His Kinase A (phosphoacceptor) domain A5955_RS03720 SM01211 A5955_RS03720 A5955_RS03725 SM00062 Bacterial periplasmic substrate-binding proteins A5955_RS03755 SM00857 Resolvase, N terminal domain A5955_RS03935 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS03940 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS03965 SM00482 DNA polymerase A domain A5955_RS03980 SM00990 A5955_RS03980 A5955_RS03990 SM00487 DEAD-like helicases superfamily A5955_RS04040 SM00358 Double-stranded RNA binding motif A5955_RS04040 SM00535 Ribonuclease III family A5955_RS04090 SM00487 DEAD-like helicases superfamily A5955_RS04090 SM00490 helicase superfamily c-terminal domain A5955_RS04110 SM00986 Uracil DNA glycosylase superfamily A5955_RS04110 SM00987 UreE urease accessory protein, C-terminal domain A5955_RS04115 SM00967 RNA 2'-O ribose methyltransferase substrate binding A5955_RS04130 SM01144 A5955_RS04130 A5955_RS04135 SM00881 CoA binding domain A5955_RS04140 SM00155 Phospholipase D. Active site motifs. A5955_RS04180 SM00382 ATPases associated with a variety of cellular activities A5955_RS04180 SM01086 C-terminal, D2-small domain, of ClpB protein A5955_RS04190 SM00363 S4 RNA-binding domain A5955_RS04210 SM00830 Chorismate mutase type II A5955_RS04215 SM00830 Chorismate mutase type II A5955_RS04235 SM00267 diguanylate cyclase A5955_RS04265 SM00382 ATPases associated with a variety of cellular activities A5955_RS04265 SM00962 SRP54-type protein, GTPase domain A5955_RS04265 SM00963 SRP54-type protein, helical bundle domain A5955_RS04275 SM01091 Transporter associated domain A5955_RS04465 SM00642 Alpha-amylase domain A5955_RS04495 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5955_RS04495 SM00895 A5955_RS04495 A5955_RS04500 SM00257 Lysin motif A5955_RS04500 SM00749 bacterial OsmY and nodulation domain A5955_RS04510 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A5955_RS04515 SM00450 Rhodanese Homology Domain A5955_RS04520 SM00528 Domain in histone-like proteins of HNS family A5955_RS04540 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5955_RS04570 SM00382 ATPases associated with a variety of cellular activities A5955_RS04600 SM00347 helix_turn_helix multiple antibiotic resistance protein A5955_RS04665 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A5955_RS04680 SM00382 ATPases associated with a variety of cellular activities A5955_RS04720 SM00420 helix_turn_helix, Deoxyribose operon repressor A5955_RS04720 SM01134 A5955_RS04720 A5955_RS04730 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A5955_RS04730 SM00382 ATPases associated with a variety of cellular activities A5955_RS04735 SM00849 Metallo-beta-lactamase superfamily A5955_RS04755 SM00354 helix_turn _helix lactose operon repressor A5955_RS04845 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A5955_RS04845 SM00382 ATPases associated with a variety of cellular activities A5955_RS04855 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A5955_RS04855 SM00534 ATPase domain of DNA mismatch repair MUTS family A5955_RS04880 SM00347 helix_turn_helix multiple antibiotic resistance protein A5955_RS04890 SM00257 Lysin motif A5955_RS04960 SM01101 A5955_RS04960 A5955_RS04985 SM00487 DEAD-like helicases superfamily A5955_RS05040 SM00893 Electron transfer flavoprotein domain A5955_RS05100 SM01192 A5955_RS05100 A5955_RS05100 SM01193 A5955_RS05100 A5955_RS05120 SM00966 SpoVT / AbrB like domain A5955_RS05125 SM00954 Region found in RelA / SpoT proteins A5955_RS05135 SM00073 Histidine Phosphotransfer domain A5955_RS05135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A5955_RS05135 SM00387 Histidine kinase-like ATPases A5955_RS05135 SM00388 His Kinase A (phosphoacceptor) domain A5955_RS05135 SM00448 cheY-homologous receiver domain A5955_RS05140 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A5955_RS05145 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A5955_RS05200 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A5955_RS05200 SM00475 5'-3' exonuclease A5955_RS05210 SM01007 Class II Aldolase and Adducin N-terminal domain A5955_RS05235 SM00420 helix_turn_helix, Deoxyribose operon repressor A5955_RS05235 SM01134 A5955_RS05235 A5955_RS05275 SM00925 MltA specific insert domain A5955_RS05295 SM00646 A5955_RS05295 A5955_RS05305 SM00382 ATPases associated with a variety of cellular activities A5955_RS05355 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A5955_RS05375 SM00927 DNA mismatch repair enzyme MutH A5955_RS05400 SM00563 Phosphate acyltransferases A5955_RS05405 SM00354 helix_turn _helix lactose operon repressor A5955_RS05455 SM00862 Transcriptional regulatory protein, C terminal A5955_RS05515 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS05535 SM00257 Lysin motif A5955_RS05540 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A5955_RS05545 SM01092 CO dehydrogenase flavoprotein C-terminal domain A5955_RS05555 SM00091 PAS domain A5955_RS05555 SM00382 ATPases associated with a variety of cellular activities A5955_RS05610 SM01092 CO dehydrogenase flavoprotein C-terminal domain A5955_RS05615 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A5955_RS05670 SM00937 A5955_RS05670 A5955_RS05715 SM01022 A5955_RS05715 A5955_RS05750 SM01011 Aminopeptidase P, N-terminal domain A5955_RS05850 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A5955_RS05870 SM00382 ATPases associated with a variety of cellular activities A5955_RS05875 SM00382 ATPases associated with a variety of cellular activities A5955_RS05910 SM00861 Transketolase, pyrimidine binding domain A5955_RS05960 SM00731 SprT homologues. A5955_RS05985 SM00732 Likely ribonuclease with RNase H fold. A5955_RS05990 SM00382 ATPases associated with a variety of cellular activities A5955_RS06005 SM01152 A5955_RS06005 A5955_RS06015 SM00729 Elongator protein 3, MiaB family, Radical SAM A5955_RS06025 SM00870 A5955_RS06025 A5955_RS06050 SM00478 endonuclease III A5955_RS06050 SM00525 A5955_RS06050 A5955_RS06290 SM00382 ATPases associated with a variety of cellular activities A5955_RS06350 SM00382 ATPases associated with a variety of cellular activities A5955_RS06375 SM01276 A5955_RS06375 A5955_RS06415 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5955_RS06415 SM00895 A5955_RS06415 A5955_RS06595 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS06625 SM00729 Elongator protein 3, MiaB family, Radical SAM A5955_RS06635 SM00563 Phosphate acyltransferases A5955_RS06640 SM00434 DNA Topoisomerase IV A5955_RS06650 SM00871 Bacterial transcription activator, effector binding domain A5955_RS06660 SM00448 cheY-homologous receiver domain A5955_RS06660 SM00862 Transcriptional regulatory protein, C terminal A5955_RS06665 SM00387 Histidine kinase-like ATPases A5955_RS06665 SM00388 His Kinase A (phosphoacceptor) domain A5955_RS06700 SM00382 ATPases associated with a variety of cellular activities A5955_RS06710 SM00387 Histidine kinase-like ATPases A5955_RS06710 SM00433 TopoisomeraseII A5955_RS06790 SM00244 prohibitin homologues A5955_RS06815 SM01118 A5955_RS06815 A5955_RS06825 SM00287 Bacterial SH3 domain homologues A5955_RS06840 SM00905 Dihydroneopterin aldolase A5955_RS06845 SM01207 A5955_RS06845 A5955_RS06880 SM00400 zinc finger A5955_RS06880 SM00493 A5955_RS06880 A5955_RS06880 SM00766 DNA primase DnaG DnaB-binding A5955_RS06910 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A5955_RS06910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A5955_RS06925 SM00354 helix_turn _helix lactose operon repressor A5955_RS06930 SM01038 Beta galactosidase small chain A5955_RS06960 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS07010 SM00858 A5955_RS07010 A5955_RS07025 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5955_RS07025 SM00895 A5955_RS07025 A5955_RS07180 SM00858 A5955_RS07180 A5955_RS07195 SM00420 helix_turn_helix, Deoxyribose operon repressor A5955_RS07195 SM01134 A5955_RS07195 A5955_RS07300 SM00749 bacterial OsmY and nodulation domain A5955_RS07310 SM00859 Semialdehyde dehydrogenase, NAD binding domain A5955_RS07325 SM00465 GIY-YIG type nucleases (URI domain) A5955_RS07365 SM00487 DEAD-like helicases superfamily A5955_RS07365 SM00490 helicase superfamily c-terminal domain A5955_RS07370 SM00028 Tetratricopeptide repeats A5955_RS07375 SM00316 Ribosomal protein S1-like RNA-binding domain A5955_RS07375 SM00322 K homology RNA-binding domain A5955_RS07380 SM01387 A5955_RS07380 A5955_RS07400 SM00316 Ribosomal protein S1-like RNA-binding domain A5955_RS07445 SM00382 ATPases associated with a variety of cellular activities A5955_RS07455 SM01103 A5955_RS07455 A5955_RS07530 SM00382 ATPases associated with a variety of cellular activities A5955_RS07560 SM00382 ATPases associated with a variety of cellular activities A5955_RS07605 SM00073 Histidine Phosphotransfer domain A5955_RS07605 SM00091 PAS domain A5955_RS07605 SM00387 Histidine kinase-like ATPases A5955_RS07605 SM00388 His Kinase A (phosphoacceptor) domain A5955_RS07605 SM00448 cheY-homologous receiver domain A5955_RS07610 SM00729 Elongator protein 3, MiaB family, Radical SAM A5955_RS07650 SM01130 A5955_RS07650 A5955_RS07655 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5955_RS07655 SM00895 A5955_RS07655 A5955_RS07695 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A5955_RS07700 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A5955_RS07755 SM00316 Ribosomal protein S1-like RNA-binding domain A5955_RS07785 SM00052 Putative diguanylate phosphodiesterase A5955_RS07785 SM00267 diguanylate cyclase A5955_RS07790 SM00829 Enoylreductase A5955_RS07815 SM00878 Biotin carboxylase C-terminal domain A5955_RS07880 SM00062 Bacterial periplasmic substrate-binding proteins A5955_RS07895 SM00382 ATPases associated with a variety of cellular activities A5955_RS08000 SM00422 helix_turn_helix, mercury resistance A5955_RS08015 SM00662 RNA polymerases D A5955_RS08020 SM00363 S4 RNA-binding domain A5955_RS08020 SM01390 A5955_RS08020 A5955_RS08085 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A5955_RS08090 SM01374 A5955_RS08090 A5955_RS08110 SM00322 K homology RNA-binding domain A5955_RS08125 SM01382 A5955_RS08125 A5955_RS08125 SM01383 A5955_RS08125 A5955_RS08145 SM01403 A5955_RS08145 A5955_RS08175 SM00838 Elongation factor G C-terminus A5955_RS08175 SM00889 Elongation factor G, domain IV A5955_RS08240 SM00382 ATPases associated with a variety of cellular activities A5955_RS08270 SM00100 Cyclic nucleotide-monophosphate binding domain A5955_RS08270 SM00419 helix_turn_helix, cAMP Regulatory protein A5955_RS08360 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5955_RS08360 SM00866 A5955_RS08360 A5955_RS08400 SM00965 Secretin and TonB N terminus short domain A5955_RS08445 SM00363 S4 RNA-binding domain A5955_RS08470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A5955_RS08470 SM00387 Histidine kinase-like ATPases A5955_RS08470 SM00388 His Kinase A (phosphoacceptor) domain A5955_RS08475 SM00448 cheY-homologous receiver domain A5955_RS08475 SM00862 Transcriptional regulatory protein, C terminal A5955_RS08485 SM00316 Ribosomal protein S1-like RNA-binding domain A5955_RS08485 SM00732 Likely ribonuclease with RNase H fold. A5955_RS08490 SM00899 A5955_RS08490 A5955_RS08540 SM00421 helix_turn_helix, Lux Regulon A5955_RS08565 SM00382 ATPases associated with a variety of cellular activities A5955_RS08570 SM00420 helix_turn_helix, Deoxyribose operon repressor A5955_RS08570 SM01134 A5955_RS08570 A5955_RS08580 SM00450 Rhodanese Homology Domain A5955_RS08620 SM00642 Alpha-amylase domain A5955_RS08625 SM00642 Alpha-amylase domain A5955_RS08630 SM00859 Semialdehyde dehydrogenase, NAD binding domain A5955_RS08660 SM00354 helix_turn _helix lactose operon repressor A5955_RS08705 SM00382 ATPases associated with a variety of cellular activities A5955_RS08730 SM00382 ATPases associated with a variety of cellular activities A5955_RS08735 SM00382 ATPases associated with a variety of cellular activities A5955_RS08785 SM00382 ATPases associated with a variety of cellular activities A5955_RS08790 SM00382 ATPases associated with a variety of cellular activities A5955_RS08790 SM00962 SRP54-type protein, GTPase domain A5955_RS08790 SM00963 SRP54-type protein, helical bundle domain A5955_RS08860 SM00563 Phosphate acyltransferases A5955_RS08915 SM00825 Beta-ketoacyl synthase A5955_RS08930 SM00825 Beta-ketoacyl synthase A5955_RS08955 SM00382 ATPases associated with a variety of cellular activities A5955_RS08960 SM00382 ATPases associated with a variety of cellular activities A5955_RS08970 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5955_RS08970 SM00866 A5955_RS08970 A5955_RS09020 SM00382 ATPases associated with a variety of cellular activities A5955_RS09110 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A5955_RS09135 SM00421 helix_turn_helix, Lux Regulon A5955_RS09160 SM00729 Elongator protein 3, MiaB family, Radical SAM A5955_RS09180 SM00382 ATPases associated with a variety of cellular activities A5955_RS09225 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS09230 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS09240 SM01235 A5955_RS09240 A5955_RS09250 SM00421 helix_turn_helix, Lux Regulon A5955_RS09275 SM00052 Putative diguanylate phosphodiesterase A5955_RS09300 SM00052 Putative diguanylate phosphodiesterase A5955_RS09300 SM00267 diguanylate cyclase A5955_RS09305 SM00028 Tetratricopeptide repeats A5955_RS09365 SM00382 ATPases associated with a variety of cellular activities A5955_RS09370 SM00382 ATPases associated with a variety of cellular activities A5955_RS09475 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS09480 SM00357 Cold shock protein domain A5955_RS09535 SM00382 ATPases associated with a variety of cellular activities A5955_RS09545 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS09550 SM00047 Lysozyme subfamily 2 A5955_RS09555 SM00642 Alpha-amylase domain A5955_RS09575 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS09720 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5955_RS09720 SM00895 A5955_RS09720 A5955_RS09735 SM00971 Serine acetyltransferase, N-terminal A5955_RS09755 SM00450 Rhodanese Homology Domain A5955_RS09780 SM00829 Enoylreductase A5955_RS09860 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A5955_RS09860 SM01232 A5955_RS09860 A5955_RS09920 SM00532 Ligase N family A5955_RS09925 SM00072 Guanylate kinase homologues. A5955_RS09930 SM01409 A5955_RS09930 A5955_RS09935 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A5955_RS09935 SM00954 Region found in RelA / SpoT proteins A5955_RS09945 SM00487 DEAD-like helicases superfamily A5955_RS09945 SM00490 helicase superfamily c-terminal domain A5955_RS10090 SM00257 Lysin motif A5955_RS10090 SM00634 Bacterial Ig-like domain (group 1) A5955_RS10090 SM00635 Bacterial Ig-like domain 2 A5955_RS10135 SM00382 ATPases associated with a variety of cellular activities A5955_RS10235 SM00528 Domain in histone-like proteins of HNS family A5955_RS10295 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS10325 SM00387 Histidine kinase-like ATPases A5955_RS10330 SM00421 helix_turn_helix, Lux Regulon A5955_RS10330 SM00448 cheY-homologous receiver domain A5955_RS10415 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS10430 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5955_RS10430 SM00866 A5955_RS10430 A5955_RS10485 SM00387 Histidine kinase-like ATPases A5955_RS10485 SM00433 TopoisomeraseII A5955_RS10495 SM00480 DNA polymerase III beta subunit A5955_RS10500 SM00382 ATPases associated with a variety of cellular activities A5955_RS10500 SM00760 Bacterial dnaA protein helix-turn-helix domain A5955_RS10515 SM01234 A5955_RS10515 A5955_RS10620 SM00382 ATPases associated with a variety of cellular activities A5955_RS10725 SM00382 ATPases associated with a variety of cellular activities A5955_RS10755 SM00382 ATPases associated with a variety of cellular activities A5955_RS10800 SM01228 A5955_RS10800 A5955_RS10810 SM00344 helix_turn_helix ASNC type A5955_RS10820 SM00327 von Willebrand factor (vWF) type A domain A5955_RS10825 SM00382 ATPases associated with a variety of cellular activities A5955_RS10840 SM00382 ATPases associated with a variety of cellular activities A5955_RS10860 SM00354 helix_turn _helix lactose operon repressor A5955_RS10870 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5955_RS10870 SM00895 A5955_RS10870 A5955_RS10915 SM00382 ATPases associated with a variety of cellular activities A5955_RS10980 SM00487 DEAD-like helicases superfamily A5955_RS10980 SM00490 helicase superfamily c-terminal domain A5955_RS10995 SM00357 Cold shock protein domain A5955_RS10995 SM00382 ATPases associated with a variety of cellular activities A5955_RS10995 SM00959 Rho termination factor, N-terminal domain A5955_RS11020 SM00984 UDP binding domain A5955_RS11130 SM01219 A5955_RS11130 A5955_RS11220 SM00341 Helicase and RNase D C-terminal A5955_RS11220 SM00487 DEAD-like helicases superfamily A5955_RS11220 SM00490 helicase superfamily c-terminal domain A5955_RS11220 SM00956 A5955_RS11220 A5955_RS11310 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A5955_RS11410 SM00563 Phosphate acyltransferases A5955_RS11425 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A5955_RS11425 SM00474 3'-5' exonuclease A5955_RS11425 SM00475 5'-3' exonuclease A5955_RS11425 SM00482 DNA polymerase A domain A5955_RS11440 SM00729 Elongator protein 3, MiaB family, Radical SAM A5955_RS11450 SM00382 ATPases associated with a variety of cellular activities A5955_RS11450 SM00448 cheY-homologous receiver domain A5955_RS11455 SM00091 PAS domain A5955_RS11455 SM00387 Histidine kinase-like ATPases A5955_RS11455 SM00388 His Kinase A (phosphoacceptor) domain A5955_RS11460 SM01230 A5955_RS11460 A5955_RS11475 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5955_RS11475 SM00866 A5955_RS11475 A5955_RS11525 SM01133 A5955_RS11525 A5955_RS11540 SM00420 helix_turn_helix, Deoxyribose operon repressor A5955_RS11540 SM01134 A5955_RS11540 A5955_RS11615 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A5955_RS11660 SM01007 Class II Aldolase and Adducin N-terminal domain A5955_RS11680 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS11685 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS11715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A5955_RS11715 SM00387 Histidine kinase-like ATPases A5955_RS11715 SM00388 His Kinase A (phosphoacceptor) domain A5955_RS11720 SM00448 cheY-homologous receiver domain A5955_RS11720 SM00862 Transcriptional regulatory protein, C terminal A5955_RS11825 SM00382 ATPases associated with a variety of cellular activities A5955_RS11825 SM01086 C-terminal, D2-small domain, of ClpB protein A5955_RS11840 SM00354 helix_turn _helix lactose operon repressor A5955_RS11845 SM00487 DEAD-like helicases superfamily A5955_RS11845 SM00490 helicase superfamily c-terminal domain A5955_RS11975 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS11995 SM00859 Semialdehyde dehydrogenase, NAD binding domain A5955_RS12125 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A5955_RS12125 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A5955_RS12130 SM00649 Ribosomal protein L11/L12 A5955_RS12155 SM00663 RNA polymerase I subunit A N-terminus A5955_RS12165 SM00876 Biotin and Thiamin Synthesis associated domain A5955_RS12220 SM00411 bacterial (prokaryotic) histone like domain A5955_RS12235 SM00387 Histidine kinase-like ATPases A5955_RS12235 SM00388 His Kinase A (phosphoacceptor) domain A5955_RS12240 SM00382 ATPases associated with a variety of cellular activities A5955_RS12240 SM00448 cheY-homologous receiver domain A5955_RS12245 SM01209 A5955_RS12245 A5955_RS12245 SM01210 A5955_RS12245 A5955_RS12250 SM00798 AICARFT/IMPCHase bienzyme A5955_RS12250 SM00851 MGS-like domain A5955_RS12300 SM00248 ankyrin repeats A5955_RS12310 SM00346 helix_turn_helix isocitrate lyase regulation A5955_RS12315 SM01018 B12 binding domain A5955_RS12360 SM00822 A5955_RS12360 A5955_RS12370 SM00363 S4 RNA-binding domain A5955_RS12450 SM00382 ATPases associated with a variety of cellular activities A5955_RS12480 SM00563 Phosphate acyltransferases A5955_RS12525 SM00829 Enoylreductase A5955_RS12530 SM00382 ATPases associated with a variety of cellular activities A5955_RS12535 SM01005 Alanine racemase, C-terminal domain A5955_RS12580 SM00052 Putative diguanylate phosphodiesterase A5955_RS12585 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS12590 SM00422 helix_turn_helix, mercury resistance A5955_RS12655 SM00028 Tetratricopeptide repeats A5955_RS12665 SM00671 Sel1-like repeats. A5955_RS12675 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A5955_RS12700 SM00849 Metallo-beta-lactamase superfamily A5955_RS12705 SM00448 cheY-homologous receiver domain A5955_RS12705 SM00862 Transcriptional regulatory protein, C terminal A5955_RS12735 SM00382 ATPases associated with a variety of cellular activities A5955_RS12740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A5955_RS12740 SM00387 Histidine kinase-like ATPases A5955_RS12740 SM00388 His Kinase A (phosphoacceptor) domain A5955_RS12740 SM00448 cheY-homologous receiver domain A5955_RS12760 SM00072 Guanylate kinase homologues. A5955_RS12770 SM00382 ATPases associated with a variety of cellular activities A5955_RS12775 SM00382 ATPases associated with a variety of cellular activities A5955_RS12800 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5955_RS12800 SM00866 A5955_RS12800 A5955_RS12815 SM00382 ATPases associated with a variety of cellular activities A5955_RS12850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A5955_RS12850 SM00387 Histidine kinase-like ATPases A5955_RS12850 SM00388 His Kinase A (phosphoacceptor) domain A5955_RS12855 SM00448 cheY-homologous receiver domain A5955_RS12855 SM00862 Transcriptional regulatory protein, C terminal A5955_RS12870 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS12880 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS12920 SM00448 cheY-homologous receiver domain A5955_RS12925 SM00091 PAS domain A5955_RS12925 SM00387 Histidine kinase-like ATPases A5955_RS12970 SM00862 Transcriptional regulatory protein, C terminal A5955_RS13030 SM00869 Autotransporter beta-domain A5955_RS13105 SM00382 ATPases associated with a variety of cellular activities A5955_RS13195 SM00869 Autotransporter beta-domain A5955_RS13335 SM00883 Chaperonin 10 Kd subunit A5955_RS13360 SM00841 Elongation factor P, C-terminal A5955_RS13360 SM01185 A5955_RS13360 A5955_RS13435 SM00479 A5955_RS13435 A5955_RS13470 SM00646 A5955_RS13470 A5955_RS13475 SM00853 MutL C terminal dimerisation domain A5955_RS13475 SM01340 A5955_RS13475 A5955_RS13495 SM00244 prohibitin homologues A5955_RS13500 SM00244 prohibitin homologues A5955_RS13510 SM00788 Adenylosuccinate synthetase A5955_RS13520 SM00316 Ribosomal protein S1-like RNA-binding domain A5955_RS13520 SM00357 Cold shock protein domain A5955_RS13520 SM00955 A5955_RS13520 A5955_RS13525 SM00967 RNA 2'-O ribose methyltransferase substrate binding A5955_RS13580 SM00420 helix_turn_helix, Deoxyribose operon repressor A5955_RS13580 SM01134 A5955_RS13580 A5955_RS13605 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A5955_RS13615 SM01007 Class II Aldolase and Adducin N-terminal domain A5955_RS13725 SM01091 Transporter associated domain A5955_RS13755 SM00966 SpoVT / AbrB like domain A5955_RS13775 SM00382 ATPases associated with a variety of cellular activities A5955_RS13825 SM00642 Alpha-amylase domain A5955_RS13835 SM00354 helix_turn _helix lactose operon repressor A5955_RS13840 SM00831 Cation transporter/ATPase, N-terminus A5955_RS13875 SM00822 A5955_RS13875 A5955_RS13945 SM00829 Enoylreductase A5955_RS13995 SM00487 DEAD-like helicases superfamily A5955_RS13995 SM00490 helicase superfamily c-terminal domain A5955_RS14000 SM00487 DEAD-like helicases superfamily A5955_RS14000 SM00490 helicase superfamily c-terminal domain A5955_RS14010 SM00487 DEAD-like helicases superfamily A5955_RS14010 SM00490 helicase superfamily c-terminal domain A5955_RS14140 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5955_RS14140 SM00895 A5955_RS14140 A5955_RS14190 SM00634 Bacterial Ig-like domain (group 1) A5955_RS14240 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5955_RS14275 SM00487 DEAD-like helicases superfamily A5955_RS14290 SM00833 Cobalamin synthesis protein cobW C-terminal domain A5955_RS14315 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A5955_RS14315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A5955_RS14315 SM00319 Homologues of the ligand binding domain of Tar A5955_RS14325 SM00895 A5955_RS14325 A5955_RS14330 SM00829 Enoylreductase A5955_RS14345 SM00382 ATPases associated with a variety of cellular activities A5955_RS14365 SM00421 helix_turn_helix, Lux Regulon A5955_RS14370 SM00421 helix_turn_helix, Lux Regulon A5955_RS14430 SM00749 bacterial OsmY and nodulation domain A5955_RS14465 SM01133 A5955_RS14465 A5955_RS14470 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain A5955_RS14485 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS14505 SM00382 ATPases associated with a variety of cellular activities A5955_RS14510 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS14520 SM00382 ATPases associated with a variety of cellular activities A5955_RS14540 SM00855 Phosphoglycerate mutase family A5955_RS14545 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS14545 SM00871 Bacterial transcription activator, effector binding domain A5955_RS14555 SM00448 cheY-homologous receiver domain A5955_RS14555 SM00862 Transcriptional regulatory protein, C terminal A5955_RS14560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A5955_RS14560 SM00387 Histidine kinase-like ATPases A5955_RS14560 SM00388 His Kinase A (phosphoacceptor) domain A5955_RS14570 SM00448 cheY-homologous receiver domain A5955_RS14570 SM00862 Transcriptional regulatory protein, C terminal A5955_RS14635 SM00852 Probable molybdopterin binding domain A5955_RS14660 SM00271 DnaJ molecular chaperone homology domain A5955_RS14715 SM00904 Riboflavin kinase A5955_RS14760 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A5955_RS14765 SM00851 MGS-like domain A5955_RS14765 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A5955_RS14810 SM00893 Electron transfer flavoprotein domain A5955_RS14815 SM00893 Electron transfer flavoprotein domain A5955_RS14870 SM00650 Ribosomal RNA adenine dimethylases A5955_RS14890 SM00271 DnaJ molecular chaperone homology domain A5955_RS14905 SM00487 DEAD-like helicases superfamily A5955_RS14905 SM00490 helicase superfamily c-terminal domain A5955_RS14910 SM00486 DNA polymerase type-B family A5955_RS14915 SM01007 Class II Aldolase and Adducin N-terminal domain A5955_RS14930 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS14940 SM00382 ATPases associated with a variety of cellular activities A5955_RS14980 SM01329 A5955_RS14980 A5955_RS14985 SM00917 LeuA allosteric (dimerisation) domain A5955_RS15015 SM00354 helix_turn _helix lactose operon repressor A5955_RS15085 SM00842 Cell division protein FtsA A5955_RS15090 SM00864 Tubulin/FtsZ family, GTPase domain A5955_RS15090 SM00865 Tubulin/FtsZ family, C-terminal domain A5955_RS15105 SM00957 SecA DEAD-like domain A5955_RS15105 SM00958 SecA preprotein cross-linking domain A5955_RS15135 SM01240 A5955_RS15135 A5955_RS15165 SM00644 A5955_RS15165 A5955_RS15180 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5955_RS15180 SM00895 A5955_RS15180 A5955_RS15235 SM00564 beta-propeller repeat A5955_RS15245 SM00947 Carbonic anhydrase A5955_RS15250 SM00382 ATPases associated with a variety of cellular activities A5955_RS15355 SM00487 DEAD-like helicases superfamily A5955_RS15355 SM00490 helicase superfamily c-terminal domain A5955_RS15355 SM00847 Helicase associated domain (HA2) Add an annotation A5955_RS15375 SM00382 ATPases associated with a variety of cellular activities A5955_RS15420 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A5955_RS15425 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A5955_RS15445 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A5955_RS15490 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A5955_RS15500 SM00935 Outer membrane protein (OmpH-like) A5955_RS15530 SM00481 DNA polymerase alpha chain like domain A5955_RS15550 SM00977 TilS substrate C-terminal domain A5955_RS15565 SM01322 A5955_RS15565 A5955_RS15610 SM00382 ATPases associated with a variety of cellular activities A5955_RS15610 SM00930 A5955_RS15610 A5955_RS15670 SM00257 Lysin motif A5955_RS15675 SM00849 Metallo-beta-lactamase superfamily A5955_RS15690 SM00479 A5955_RS15690 A5955_RS15750 SM00382 ATPases associated with a variety of cellular activities A5955_RS15750 SM01086 C-terminal, D2-small domain, of ClpB protein A5955_RS15830 SM00248 ankyrin repeats A5955_RS15995 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A5955_RS16095 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS16100 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS16260 SM00635 Bacterial Ig-like domain 2 A5955_RS16290 SM00232 JAB/MPN domain A5955_RS16300 SM00060 Fibronectin type 3 domain A5955_RS16440 SM00778 Zinc-binding domain of primase-helicase A5955_RS16440 SM00885 D5 N terminal like A5955_RS16485 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A5955_RS16490 SM01092 CO dehydrogenase flavoprotein C-terminal domain A5955_RS16535 SM00421 helix_turn_helix, Lux Regulon A5955_RS16580 SM00634 Bacterial Ig-like domain (group 1) A5955_RS16585 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS16585 SM00871 Bacterial transcription activator, effector binding domain A5955_RS16610 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS16640 SM00869 Autotransporter beta-domain A5955_RS16650 SM00421 helix_turn_helix, Lux Regulon A5955_RS16685 SM00869 Autotransporter beta-domain A5955_RS16690 SM00052 Putative diguanylate phosphodiesterase A5955_RS16690 SM00421 helix_turn_helix, Lux Regulon A5955_RS16705 SM00248 ankyrin repeats A5955_RS16745 SM01022 A5955_RS16745 A5955_RS16755 SM00382 ATPases associated with a variety of cellular activities A5955_RS16770 SM00829 Enoylreductase A5955_RS16795 SM00382 ATPases associated with a variety of cellular activities A5955_RS16835 SM00947 Carbonic anhydrase A5955_RS16840 SM01116 A5955_RS16840 A5955_RS16850 SM01266 A5955_RS16850 A5955_RS16860 SM01038 Beta galactosidase small chain A5955_RS16870 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS16880 SM00346 helix_turn_helix isocitrate lyase regulation A5955_RS16905 SM00859 Semialdehyde dehydrogenase, NAD binding domain A5955_RS16930 SM00829 Enoylreductase A5955_RS16940 SM00382 ATPases associated with a variety of cellular activities A5955_RS16960 SM00387 Histidine kinase-like ATPases A5955_RS16965 SM00421 helix_turn_helix, Lux Regulon A5955_RS16965 SM00448 cheY-homologous receiver domain A5955_RS16970 SM00062 Bacterial periplasmic substrate-binding proteins A5955_RS16975 SM00382 ATPases associated with a variety of cellular activities A5955_RS16990 SM01004 Delta-aminolevulinic acid dehydratase A5955_RS16995 SM00869 Autotransporter beta-domain A5955_RS17055 SM00098 Alkaline phosphatase homologues A5955_RS17065 SM00267 diguanylate cyclase A5955_RS17140 SM00448 cheY-homologous receiver domain A5955_RS17140 SM00862 Transcriptional regulatory protein, C terminal A5955_RS17145 SM00091 PAS domain A5955_RS17145 SM00387 Histidine kinase-like ATPases A5955_RS17145 SM00388 His Kinase A (phosphoacceptor) domain A5955_RS17160 SM00642 Alpha-amylase domain A5955_RS17185 SM01323 A5955_RS17185 A5955_RS17210 SM00507 HNH nucleases A5955_RS17270 SM00861 Transketolase, pyrimidine binding domain A5955_RS17285 SM00981 A5955_RS17285 A5955_RS17365 SM00382 ATPases associated with a variety of cellular activities A5955_RS17365 SM00994 ClpX C4-type zinc finger A5955_RS17365 SM01086 C-terminal, D2-small domain, of ClpB protein A5955_RS17370 SM00382 ATPases associated with a variety of cellular activities A5955_RS17370 SM00464 Found in ATP-dependent protease La (LON) A5955_RS17375 SM00411 bacterial (prokaryotic) histone like domain A5955_RS17385 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A5955_RS17410 SM00344 helix_turn_helix ASNC type A5955_RS17415 SM00382 ATPases associated with a variety of cellular activities A5955_RS17420 SM00382 ATPases associated with a variety of cellular activities A5955_RS17425 SM00938 Nitrogen regulatory protein P-II A5955_RS17460 SM00052 Putative diguanylate phosphodiesterase A5955_RS17470 SM01266 A5955_RS17470 A5955_RS17525 SM00382 ATPases associated with a variety of cellular activities A5955_RS17535 SM00493 A5955_RS17535 A5955_RS17540 SM00387 Histidine kinase-like ATPases A5955_RS17590 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS17615 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins A5955_RS17620 SM00382 ATPases associated with a variety of cellular activities A5955_RS17630 SM00422 helix_turn_helix, mercury resistance A5955_RS17660 SM00244 prohibitin homologues A5955_RS17665 SM00382 ATPases associated with a variety of cellular activities A5955_RS17680 SM00822 A5955_RS17680 A5955_RS17690 SM00382 ATPases associated with a variety of cellular activities A5955_RS17720 SM00450 Rhodanese Homology Domain A5955_RS17735 SM00346 helix_turn_helix isocitrate lyase regulation A5955_RS17815 SM01001 AIR carboxylase A5955_RS17830 SM00840 A5955_RS17830 A5955_RS17875 SM00421 helix_turn_helix, Lux Regulon A5955_RS17875 SM00448 cheY-homologous receiver domain A5955_RS17935 SM01022 A5955_RS17935 A5955_RS17945 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS17985 SM00857 Resolvase, N terminal domain A5955_RS17995 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS18115 SM00635 Bacterial Ig-like domain 2 A5955_RS18145 SM00232 JAB/MPN domain A5955_RS18195 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS18210 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS18220 SM00028 Tetratricopeptide repeats A5955_RS18265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A5955_RS18265 SM00387 Histidine kinase-like ATPases A5955_RS18265 SM00388 His Kinase A (phosphoacceptor) domain A5955_RS18270 SM00448 cheY-homologous receiver domain A5955_RS18270 SM00862 Transcriptional regulatory protein, C terminal A5955_RS18360 SM00923 MbtH-like protein A5955_RS18365 SM00823 Phosphopantetheine attachment site A5955_RS18365 SM00824 Thioesterase A5955_RS18375 SM00382 ATPases associated with a variety of cellular activities A5955_RS18415 SM00822 A5955_RS18415 A5955_RS18445 SM00470 ParB-like nuclease domain A5955_RS18530 SM00764 Citrate lyase ligase C-terminal domain A5955_RS18535 SM00091 PAS domain A5955_RS18535 SM00387 Histidine kinase-like ATPases A5955_RS18555 SM00357 Cold shock protein domain A5955_RS18575 SM00729 Elongator protein 3, MiaB family, Radical SAM A5955_RS18600 SM00936 Penicillin-binding protein 5, C-terminal domain A5955_RS18630 SM00855 Phosphoglycerate mutase family A5955_RS18660 SM00671 Sel1-like repeats. A5955_RS18670 SM00271 DnaJ molecular chaperone homology domain A5955_RS18675 SM00671 Sel1-like repeats. A5955_RS18700 SM00382 ATPases associated with a variety of cellular activities A5955_RS18715 SM00062 Bacterial periplasmic substrate-binding proteins A5955_RS18725 SM00116 Domain in cystathionine beta-synthase and other proteins. A5955_RS18725 SM01091 Transporter associated domain A5955_RS18740 SM00729 Elongator protein 3, MiaB family, Radical SAM A5955_RS18885 SM00448 cheY-homologous receiver domain A5955_RS18885 SM00862 Transcriptional regulatory protein, C terminal A5955_RS18890 SM00387 Histidine kinase-like ATPases A5955_RS18890 SM00388 His Kinase A (phosphoacceptor) domain A5955_RS18960 SM00796 Allophanate hydrolase subunit 1 A5955_RS18965 SM00797 Allophanate hydrolase subunit 2 A5955_RS18975 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A5955_RS18975 SM01232 A5955_RS18975 A5955_RS19040 SM00861 Transketolase, pyrimidine binding domain A5955_RS19055 SM00881 CoA binding domain A5955_RS19245 SM00855 Phosphoglycerate mutase family A5955_RS19270 SM00382 ATPases associated with a variety of cellular activities A5955_RS19295 SM00382 ATPases associated with a variety of cellular activities A5955_RS19425 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS19430 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS19575 SM00635 Bacterial Ig-like domain 2 A5955_RS19670 SM00729 Elongator protein 3, MiaB family, Radical SAM A5955_RS19670 SM00876 Biotin and Thiamin Synthesis associated domain A5955_RS19690 SM00487 DEAD-like helicases superfamily A5955_RS19690 SM00490 helicase superfamily c-terminal domain A5955_RS19700 SM00729 Elongator protein 3, MiaB family, Radical SAM A5955_RS19705 SM00852 Probable molybdopterin binding domain A5955_RS19740 SM00155 Phospholipase D. Active site motifs. A5955_RS19765 SM00382 ATPases associated with a variety of cellular activities A5955_RS19780 SM00487 DEAD-like helicases superfamily A5955_RS19780 SM00490 helicase superfamily c-terminal domain A5955_RS19795 SM00487 DEAD-like helicases superfamily A5955_RS19795 SM00488 A5955_RS19795 A5955_RS19795 SM00491 A5955_RS19795 A5955_RS19820 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A5955_RS19850 SM00382 ATPases associated with a variety of cellular activities A5955_RS19860 SM00062 Bacterial periplasmic substrate-binding proteins A5955_RS19860 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A5955_RS19895 SM00529 Helix-turn-helix diphteria tox regulatory element A5955_RS19910 SM00382 ATPases associated with a variety of cellular activities A5955_RS19945 SM00852 Probable molybdopterin binding domain A5955_RS19955 SM00382 ATPases associated with a variety of cellular activities A5955_RS19975 SM00052 Putative diguanylate phosphodiesterase A5955_RS19980 SM00267 diguanylate cyclase A5955_RS19985 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS19995 SM00729 Elongator protein 3, MiaB family, Radical SAM A5955_RS20015 SM00936 Penicillin-binding protein 5, C-terminal domain A5955_RS20020 SM00420 helix_turn_helix, Deoxyribose operon repressor A5955_RS20020 SM01134 A5955_RS20020 A5955_RS20025 SM00014 Acid phosphatase homologues A5955_RS20100 SM00382 ATPases associated with a variety of cellular activities A5955_RS20140 SM00062 Bacterial periplasmic substrate-binding proteins A5955_RS20140 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A5955_RS20155 SM00062 Bacterial periplasmic substrate-binding proteins A5955_RS20155 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A5955_RS20160 SM00382 ATPases associated with a variety of cellular activities A5955_RS20195 SM00644 A5955_RS20195 A5955_RS20260 SM00382 ATPases associated with a variety of cellular activities A5955_RS20265 SM00357 Cold shock protein domain A5955_RS20275 SM00382 ATPases associated with a variety of cellular activities A5955_RS20275 SM01086 C-terminal, D2-small domain, of ClpB protein A5955_RS20285 SM00316 Ribosomal protein S1-like RNA-binding domain A5955_RS20295 SM00382 ATPases associated with a variety of cellular activities A5955_RS20300 SM00382 ATPases associated with a variety of cellular activities A5955_RS20310 SM00344 helix_turn_helix ASNC type A5955_RS20315 SM00843 A5955_RS20315 A5955_RS20325 SM00382 ATPases associated with a variety of cellular activities A5955_RS20335 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A5955_RS20410 SM00316 Ribosomal protein S1-like RNA-binding domain A5955_RS20415 SM00411 bacterial (prokaryotic) histone like domain A5955_RS20420 SM00849 Metallo-beta-lactamase superfamily A5955_RS20425 SM00382 ATPases associated with a variety of cellular activities A5955_RS20490 SM00849 Metallo-beta-lactamase superfamily A5955_RS20525 SM00382 ATPases associated with a variety of cellular activities A5955_RS20540 SM00062 Bacterial periplasmic substrate-binding proteins A5955_RS20600 SM00981 A5955_RS20600 A5955_RS20605 SM00382 ATPases associated with a variety of cellular activities A5955_RS20680 SM00851 MGS-like domain A5955_RS20695 SM00881 CoA binding domain A5955_RS20700 SM00992 Hemimethylated DNA-binding protein YccV like A5955_RS20705 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A5955_RS20785 SM00226 Low molecular weight phosphatase family A5955_RS20815 SM00357 Cold shock protein domain A5955_RS20820 SM00357 Cold shock protein domain A5955_RS20840 SM00073 Histidine Phosphotransfer domain A5955_RS20840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A5955_RS20840 SM00387 Histidine kinase-like ATPases A5955_RS20840 SM00388 His Kinase A (phosphoacceptor) domain A5955_RS20840 SM00448 cheY-homologous receiver domain A5955_RS20850 SM00448 cheY-homologous receiver domain A5955_RS20850 SM00862 Transcriptional regulatory protein, C terminal A5955_RS20875 SM00271 DnaJ molecular chaperone homology domain A5955_RS20915 SM00903 Flavin reductase like domain A5955_RS21015 SM00028 Tetratricopeptide repeats A5955_RS21025 SM00052 Putative diguanylate phosphodiesterase A5955_RS21035 SM00862 Transcriptional regulatory protein, C terminal A5955_RS21075 SM00912 haemagglutination activity domain A5955_RS21090 SM00822 A5955_RS21090 A5955_RS21110 SM00825 Beta-ketoacyl synthase A5955_RS21115 SM00825 Beta-ketoacyl synthase A5955_RS21125 SM00382 ATPases associated with a variety of cellular activities A5955_RS21170 SM00481 DNA polymerase alpha chain like domain A5955_RS21200 SM00421 helix_turn_helix, Lux Regulon A5955_RS21230 SM00506 Appr-1"-p processing enzyme A5955_RS21235 SM00155 Phospholipase D. Active site motifs. A5955_RS21285 SM00450 Rhodanese Homology Domain A5955_RS21290 SM00867 YceI-like domain A5955_RS21370 SM00858 A5955_RS21370 A5955_RS21415 SM00047 Lysozyme subfamily 2 A5955_RS21430 SM00316 Ribosomal protein S1-like RNA-binding domain A5955_RS21440 SM00363 S4 RNA-binding domain A5955_RS21470 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A5955_RS21475 SM00822 A5955_RS21475 A5955_RS21485 SM00825 Beta-ketoacyl synthase A5955_RS21575 SM00257 Lysin motif A5955_RS21580 SM00487 DEAD-like helicases superfamily A5955_RS21580 SM00490 helicase superfamily c-terminal domain A5955_RS21580 SM00982 A5955_RS21580 A5955_RS21580 SM01058 CarD-like/TRCF domain A5955_RS21595 SM00382 ATPases associated with a variety of cellular activities A5955_RS21630 SM00382 ATPases associated with a variety of cellular activities A5955_RS21645 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. A5955_RS21745 SM00387 Histidine kinase-like ATPases A5955_RS21750 SM00448 cheY-homologous receiver domain A5955_RS21750 SM00862 Transcriptional regulatory protein, C terminal A5955_RS21780 SM01329 A5955_RS21780 A5955_RS21800 SM00422 helix_turn_helix, mercury resistance A5955_RS21830 SM00052 Putative diguanylate phosphodiesterase A5955_RS21855 SM00869 Autotransporter beta-domain A5955_RS21875 SM00869 Autotransporter beta-domain A5955_RS21950 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5955_RS21965 SM01005 Alanine racemase, C-terminal domain A5955_RS21970 SM00364 Leucine-rich repeats, bacterial type A5955_RS21975 SM01091 Transporter associated domain A5955_RS22015 SM00382 ATPases associated with a variety of cellular activities A5955_RS22040 SM01120 A5955_RS22040 A5955_RS22050 SM00091 PAS domain A5955_RS22050 SM00382 ATPases associated with a variety of cellular activities A5955_RS22055 SM00869 Autotransporter beta-domain A5955_RS22085 SM01400 A5955_RS22085 A5955_RS22105 SM00937 A5955_RS22105 A5955_RS22165 SM00421 helix_turn_helix, Lux Regulon A5955_RS22165 SM00448 cheY-homologous receiver domain A5955_RS22170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A5955_RS22170 SM00387 Histidine kinase-like ATPases A5955_RS22185 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A5955_RS22240 SM00448 cheY-homologous receiver domain A5955_RS22250 SM00528 Domain in histone-like proteins of HNS family A5955_RS22285 SM00382 ATPases associated with a variety of cellular activities A5955_RS22290 SM00382 ATPases associated with a variety of cellular activities A5955_RS22300 SM00155 Phospholipase D. Active site motifs. A5955_RS22395 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS22445 SM00507 HNH nucleases A5955_RS22745 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS22765 SM00382 ATPases associated with a variety of cellular activities A5955_RS22815 SM00507 HNH nucleases A5955_RS22925 SM00635 Bacterial Ig-like domain 2 A5955_RS22955 SM00232 JAB/MPN domain A5955_RS23045 SM00481 DNA polymerase alpha chain like domain A5955_RS23060 SM00363 S4 RNA-binding domain A5955_RS23070 SM00822 A5955_RS23070 A5955_RS23095 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A5955_RS23095 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A5955_RS23095 SM00493 A5955_RS23095 A5955_RS23130 SM00014 Acid phosphatase homologues A5955_RS23140 SM00028 Tetratricopeptide repeats A5955_RS23145 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A5955_RS23160 SM00420 helix_turn_helix, Deoxyribose operon repressor A5955_RS23160 SM01134 A5955_RS23160 A5955_RS23170 SM00052 Putative diguanylate phosphodiesterase A5955_RS23170 SM00091 PAS domain A5955_RS23170 SM00267 diguanylate cyclase A5955_RS23175 SM00357 Cold shock protein domain A5955_RS23175 SM00955 A5955_RS23175 A5955_RS23215 SM00382 ATPases associated with a variety of cellular activities A5955_RS23220 SM00382 ATPases associated with a variety of cellular activities A5955_RS23255 SM01230 A5955_RS23255 A5955_RS23265 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS23285 SM00382 ATPases associated with a variety of cellular activities A5955_RS23310 SM00450 Rhodanese Homology Domain A5955_RS23365 SM00382 ATPases associated with a variety of cellular activities A5955_RS23375 SM00354 helix_turn _helix lactose operon repressor A5955_RS23390 SM00091 PAS domain A5955_RS23390 SM00382 ATPases associated with a variety of cellular activities A5955_RS23400 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A5955_RS23460 SM00100 Cyclic nucleotide-monophosphate binding domain A5955_RS23460 SM00419 helix_turn_helix, cAMP Regulatory protein A5955_RS23500 SM00463 Small MutS-related domain A5955_RS23505 SM00091 PAS domain A5955_RS23505 SM00267 diguanylate cyclase A5955_RS23520 SM00487 DEAD-like helicases superfamily A5955_RS23520 SM00490 helicase superfamily c-terminal domain A5955_RS23540 SM00890 Domain of unknown function A5955_RS23580 SM00869 Autotransporter beta-domain A5955_RS23610 SM00195 Dual specificity phosphatase, catalytic domain A5955_RS23610 SM00404 Protein tyrosine phosphatase, catalytic domain motif A5955_RS23620 SM00382 ATPases associated with a variety of cellular activities A5955_RS23620 SM00487 DEAD-like helicases superfamily A5955_RS23620 SM00490 helicase superfamily c-terminal domain A5955_RS23620 SM00847 Helicase associated domain (HA2) Add an annotation A5955_RS23655 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A5955_RS23675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A5955_RS23675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A5955_RS23675 SM00319 Homologues of the ligand binding domain of Tar A5955_RS23685 SM01150 A5955_RS23685 A5955_RS23735 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS23755 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS23760 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5955_RS23770 SM00382 ATPases associated with a variety of cellular activities A5955_RS23815 SM00829 Enoylreductase A5955_RS23820 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5955_RS23820 SM00895 A5955_RS23820 A5955_RS23885 SM00903 Flavin reductase like domain A5955_RS23915 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A5955_RS23950 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A5955_RS23970 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS23975 SM00829 Enoylreductase A5955_RS23980 SM00919 Malic enzyme, NAD binding domain A5955_RS23980 SM01274 A5955_RS23980 A5955_RS24000 SM00382 ATPases associated with a variety of cellular activities A5955_RS24005 SM00382 ATPases associated with a variety of cellular activities A5955_RS24030 SM00052 Putative diguanylate phosphodiesterase A5955_RS24030 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A5955_RS24030 SM00091 PAS domain A5955_RS24030 SM00267 diguanylate cyclase A5955_RS24035 SM00267 diguanylate cyclase A5955_RS24070 SM00382 ATPases associated with a variety of cellular activities A5955_RS24085 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS24130 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS24140 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS24145 SM00869 Autotransporter beta-domain A5955_RS24165 SM00382 ATPases associated with a variety of cellular activities A5955_RS24185 SM01133 A5955_RS24185 A5955_RS24215 SM00267 diguanylate cyclase A5955_RS24260 SM00347 helix_turn_helix multiple antibiotic resistance protein A5955_RS24265 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS24285 SM00450 Rhodanese Homology Domain A5955_RS24290 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS24300 SM00267 diguanylate cyclase A5955_RS24325 SM00345 helix_turn_helix gluconate operon transcriptional repressor A5955_RS24325 SM00895 A5955_RS24325 A5955_RS24395 SM00232 JAB/MPN domain A5955_RS24425 SM00635 Bacterial Ig-like domain 2 A5955_RS24560 SM00507 HNH nucleases A5955_RS24630 SM00530 Helix-turn-helix XRE-family like proteins A5955_RS24675 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A5955_RS24705 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A5955_RS24710 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A5955_RS24790 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A5955_RS24790 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A5955_RS24815 SM00448 cheY-homologous receiver domain A5955_RS24815 SM00862 Transcriptional regulatory protein, C terminal A5955_RS24820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A5955_RS24820 SM00387 Histidine kinase-like ATPases A5955_RS24820 SM00388 His Kinase A (phosphoacceptor) domain A5955_RS24875 SM00354 helix_turn _helix lactose operon repressor A5955_RS24935 SM00900 A5955_RS24935 A5955_RS24945 SM00478 endonuclease III A5955_RS24945 SM00525 A5955_RS24945 A5955_RS24970 SM00363 S4 RNA-binding domain A5955_RS24995 SM00347 helix_turn_helix multiple antibiotic resistance protein A5955_RS25045 SM00479 A5955_RS25045 A5955_RS25050 SM00382 ATPases associated with a variety of cellular activities A5955_RS25050 SM00487 DEAD-like helicases superfamily A5955_RS25050 SM00490 helicase superfamily c-terminal domain A5955_RS25080 SM00354 helix_turn _helix lactose operon repressor A5955_RS25155 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain A5955_RS25180 SM00257 Lysin motif A5955_RS25200 SM00382 ATPases associated with a variety of cellular activities A5955_RS25265 SM00882 Coenzyme A transferase A5955_RS25275 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS25285 SM00893 Electron transfer flavoprotein domain A5955_RS25290 SM00893 Electron transfer flavoprotein domain A5955_RS25350 SM00382 ATPases associated with a variety of cellular activities A5955_RS25365 SM00411 bacterial (prokaryotic) histone like domain A5955_RS25370 SM00873 B3/4 domain A5955_RS25370 SM00874 tRNA synthetase B5 domain A5955_RS25370 SM00896 Ferredoxin-fold anticodon binding domain A5955_RS25400 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A5955_RS25465 SM01060 A5955_RS25465 A5955_RS25480 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS25515 SM00465 GIY-YIG type nucleases (URI domain) A5955_RS25590 SM00382 ATPases associated with a variety of cellular activities A5955_RS25595 SM00450 Rhodanese Homology Domain A5955_RS25615 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A5955_RS25630 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A5955_RS25630 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A5955_RS25630 SM00493 A5955_RS25630 A5955_RS25665 SM00870 A5955_RS25665 A5955_RS25680 SM00420 helix_turn_helix, Deoxyribose operon repressor A5955_RS25680 SM01134 A5955_RS25680 A5955_RS25700 SM00829 Enoylreductase A5955_RS25725 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A5955_RS25745 SM00763 PrkA AAA domain A5955_RS25755 SM00267 diguanylate cyclase A5955_RS25760 SM00267 diguanylate cyclase A5955_RS25780 SM00342 helix_turn_helix, arabinose operon control protein A5955_RS25800 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A5955_RS25800 SM00267 diguanylate cyclase A5955_RS25835 SM01329 A5955_RS25835 A5955_RS25855 SM00341 Helicase and RNase D C-terminal A5955_RS25855 SM00474 3'-5' exonuclease A5955_RS25875 SM00487 DEAD-like helicases superfamily A5955_RS25875 SM00491 A5955_RS25875 A5955_RS25910 SM00052 Putative diguanylate phosphodiesterase A5955_RS25915 SM01091 Transporter associated domain A5955_RS25955 SM00357 Cold shock protein domain A5955_RS25985 SM00346 helix_turn_helix isocitrate lyase regulation A5955_RS26000 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A5955_RS26000 SM00245 tail specific protease A5955_RS26005 SM00945 ProQ/FINO family A5955_RS26010 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A5955_RS26075 SM00479 A5955_RS26075 A5955_RS26145 SM00257 Lysin motif A5955_RS26155 SM00382 ATPases associated with a variety of cellular activities A5955_RS26165 SM00382 ATPases associated with a variety of cellular activities A5955_RS26170 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A5955_RS26245 SM00836 DALR anticodon binding domain A5955_RS26245 SM01016 Arginyl tRNA synthetase N terminal dom A5955_RS26275 SM00448 cheY-homologous receiver domain A5955_RS26280 SM00448 cheY-homologous receiver domain A5955_RS26285 SM00138 Methyltransferase, chemotaxis proteins A5955_RS26290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A5955_RS26290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A5955_RS26290 SM00319 Homologues of the ligand binding domain of Tar A5955_RS26295 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A5955_RS26295 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A5955_RS26295 SM00319 Homologues of the ligand binding domain of Tar A5955_RS26300 SM00260 Two component signalling adaptor domain A5955_RS26305 SM00073 Histidine Phosphotransfer domain A5955_RS26305 SM00260 Two component signalling adaptor domain A5955_RS26305 SM00387 Histidine kinase-like ATPases A5955_RS26305 SM01231 A5955_RS26305 A5955_RS26350 SM00382 ATPases associated with a variety of cellular activities A5955_RS26420 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A5955_RS26420 SM00465 GIY-YIG type nucleases (URI domain) A5955_RS26425 SM00421 helix_turn_helix, Lux Regulon A5955_RS26425 SM00448 cheY-homologous receiver domain A5955_RS26440 SM00421 helix_turn_helix, Lux Regulon A5955_RS26445 SM00382 ATPases associated with a variety of cellular activities A5955_RS26460 SM00062 Bacterial periplasmic substrate-binding proteins A5955_RS26460 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A5955_RS26495 SM00642 Alpha-amylase domain A5955_RS26525 SM00364 Leucine-rich repeats, bacterial type A5955_RS26570 SM00382 ATPases associated with a variety of cellular activities A5955_RS26620 SM00421 helix_turn_helix, Lux Regulon A5955_RS26640 SM00267 diguanylate cyclase A5955_RS26670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A5955_RS26695 SM00387 Histidine kinase-like ATPases A5955_RS26695 SM00388 His Kinase A (phosphoacceptor) domain A5955_RS26700 SM00448 cheY-homologous receiver domain A5955_RS26700 SM00862 Transcriptional regulatory protein, C terminal A5955_RS26705 SM00095 Transthyretin A5955_RS26775 SM00060 Fibronectin type 3 domain A5955_RS26785 SM00232 JAB/MPN domain A5955_RS26815 SM00635 Bacterial Ig-like domain 2 A5955_RS26970 SM00507 HNH nucleases A5955_RS27140 SM00635 Bacterial Ig-like domain 2