locus-tag class description ND05_RS00030 PF13817 IS66 C-terminal element ND05_RS00030 PF13005 zinc-finger binding domain of transposase IS66 ND05_RS00030 PF03050 Transposase IS66 family ND05_RS00030 PF13007 Transposase C of IS166 homeodomain ND05_RS00050 PF04986 Putative transposase ND05_RS00050 PF14319 Transposase zinc-binding domain ND05_RS00055 PF13817 IS66 C-terminal element ND05_RS00055 PF03050 Transposase IS66 family ND05_RS00055 PF13005 zinc-finger binding domain of transposase IS66 ND05_RS00055 PF13007 Transposase C of IS166 homeodomain ND05_RS00060 PF05717 IS66 Orf2 like protein ND05_RS00070 PF00589 Phage integrase family ND05_RS00140 PF01850 PIN domain ND05_RS00145 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ND05_RS00165 PF00589 Phage integrase family ND05_RS00170 PF13995 YebF-like protein ND05_RS00190 PF03412 Peptidase C39 family ND05_RS00190 PF00005 ABC transporter ND05_RS00190 PF00664 ABC transporter transmembrane region ND05_RS00195 PF08339 RTX C-terminal domain ND05_RS00195 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ND05_RS00195 PF02382 N-terminal domain in RTX protein ND05_RS00215 PF01522 Polysaccharide deacetylase ND05_RS00220 PF13439 Glycosyltransferase Family 4 ND05_RS00220 PF00534 Glycosyl transferases group 1 ND05_RS00230 PF03279 Bacterial lipid A biosynthesis acyltransferase ND05_RS00240 PF13817 IS66 C-terminal element ND05_RS00240 PF13005 zinc-finger binding domain of transposase IS66 ND05_RS00240 PF03050 Transposase IS66 family ND05_RS00240 PF13007 Transposase C of IS166 homeodomain ND05_RS00245 PF05717 IS66 Orf2 like protein ND05_RS00335 PF02387 IncFII RepA protein family ND05_RS00365 PF07290 Protein of unknown function (DUF1449) ND05_RS00380 PF03797 Autotransporter beta-domain ND05_RS00380 PF13018 Extended Signal Peptide of Type V secretion system ND05_RS00380 PF02395 Immunoglobulin A1 protease ND05_RS00415 PF07128 Protein of unknown function (DUF1380) ND05_RS00425 PF01555 DNA methylase ND05_RS00435 PF06924 Protein of unknown function (DUF1281) ND05_RS00440 PF06406 StbA protein ND05_RS00465 PF01051 Initiator Replication protein ND05_RS00480 PF05717 IS66 Orf2 like protein ND05_RS00485 PF03050 Transposase IS66 family ND05_RS00485 PF13817 IS66 C-terminal element ND05_RS00485 PF13007 Transposase C of IS166 homeodomain ND05_RS00485 PF13005 zinc-finger binding domain of transposase IS66 ND05_RS00545 PF01047 MarR family ND05_RS00580 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ND05_RS00580 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND05_RS00580 PF18267 Rubredoxin NAD+ reductase C-terminal domain ND05_RS00580 PF04324 BFD-like [2Fe-2S] binding domain ND05_RS00580 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ND05_RS00585 PF13806 Rieske-like [2Fe-2S] domain ND05_RS00590 PF01226 Formate/nitrite transporter ND05_RS00595 PF10414 Sirohaem synthase dimerisation region ND05_RS00595 PF14824 Sirohaem biosynthesis protein central ND05_RS00595 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ND05_RS00600 PF13978 Protein of unknown function (DUF4223) ND05_RS00615 PF13520 Amino acid permease ND05_RS00620 PF01380 SIS domain ND05_RS00630 PF01261 Xylose isomerase-like TIM barrel ND05_RS00635 PF00294 pfkB family carbohydrate kinase ND05_RS00640 PF07702 UTRA domain ND05_RS00640 PF00392 Bacterial regulatory proteins, gntR family ND05_RS00650 PF10797 Protein of unknown function ND05_RS00655 PF10941 Protein of unknown function DUF2620 ND05_RS00660 PF02126 Phosphotriesterase family ND05_RS00665 PF01676 Metalloenzyme superfamily ND05_RS00670 PF01168 Alanine racemase, N-terminal domain ND05_RS00680 PF14503 YhfZ C-terminal domain ND05_RS00680 PF14502 Helix-turn-helix domain ND05_RS00685 PF00579 tRNA synthetases class I (W and Y) ND05_RS00690 PF13419 Haloacid dehalogenase-like hydrolase ND05_RS00695 PF00834 Ribulose-phosphate 3 epimerase family ND05_RS00700 PF02086 D12 class N6 adenine-specific DNA methyltransferase ND05_RS00705 PF05036 Sporulation related domain ND05_RS00710 PF01761 3-dehydroquinate synthase ND05_RS00715 PF01202 Shikimate kinase ND05_RS00725 PF00263 Bacterial type II and III secretion system protein ND05_RS00725 PF03958 Bacterial type II/III secretion system short domain ND05_RS00730 PF10748 DNA utilization proteins HofP ND05_RS00740 PF05137 Fimbrial assembly protein (PilN) ND05_RS00750 PF17092 Penicillin-binding protein OB-like domain ND05_RS00750 PF00912 Transglycosylase ND05_RS00750 PF00905 Penicillin binding protein transpeptidase domain ND05_RS00755 PF00293 NUDIX domain ND05_RS00760 PF07095 Intracellular growth attenuator protein IgaA ND05_RS00765 PF13419 Haloacid dehalogenase-like hydrolase ND05_RS00770 PF01479 S4 domain ND05_RS00775 PF01430 Hsp33 protein ND05_RS00780 PF13687 Domain of unknown function (DUF4153) ND05_RS00790 PF01293 Phosphoenolpyruvate carboxykinase ND05_RS00795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS00795 PF00512 His Kinase A (phospho-acceptor) domain ND05_RS00795 PF00672 HAMP domain ND05_RS00800 PF00486 Transcriptional regulatory protein, C terminal ND05_RS00800 PF00072 Response regulator receiver domain ND05_RS00810 PF01272 Transcription elongation factor, GreA/GreB, C-term ND05_RS00810 PF03449 Transcription elongation factor, N-terminal ND05_RS00815 PF00575 S1 RNA binding domain ND05_RS00815 PF09371 Tex-like protein N-terminal domain ND05_RS00815 PF16921 Tex protein YqgF-like domain ND05_RS00815 PF17674 HHH domain ND05_RS00825 PF04023 FeoA domain ND05_RS00830 PF02421 Ferrous iron transport protein B ND05_RS00830 PF17910 FeoB cytosolic helical domain ND05_RS00830 PF07670 Nucleoside recognition ND05_RS00830 PF07664 Ferrous iron transport protein B C terminus ND05_RS00835 PF09012 FeoC like transcriptional regulator ND05_RS00845 PF04754 Putative transposase, YhgA-like ND05_RS00850 PF00561 alpha/beta hydrolase fold ND05_RS00855 PF00156 Phosphoribosyl transferase domain ND05_RS00860 PF01521 Iron-sulphur cluster biosynthesis ND05_RS00860 PF01106 NifU-like domain ND05_RS00865 PF02447 GntP family permease ND05_RS00870 PF02446 4-alpha-glucanotransferase ND05_RS00875 PF00343 Carbohydrate phosphorylase ND05_RS00880 PF00196 Bacterial regulatory proteins, luxR family ND05_RS00880 PF17874 MalT-like TPR region ND05_RS00885 PF01137 RNA 3'-terminal phosphate cyclase ND05_RS00885 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain ND05_RS00890 PF01139 tRNA-splicing ligase RtcB ND05_RS00895 PF06956 Regulator of RNA terminal phosphate cyclase ND05_RS00895 PF00158 Sigma-54 interaction domain ND05_RS00900 PF00455 DeoR C terminal sensor domain ND05_RS00900 PF08220 DeoR-like helix-turn-helix domain ND05_RS00905 PF01694 Rhomboid family ND05_RS00905 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ND05_RS00910 PF00581 Rhodanese-like domain ND05_RS00915 PF01266 FAD dependent oxidoreductase ND05_RS00915 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ND05_RS00940 PF00343 Carbohydrate phosphorylase ND05_RS00945 PF00534 Glycosyl transferases group 1 ND05_RS00945 PF08323 Starch synthase catalytic domain ND05_RS00950 PF00483 Nucleotidyl transferase ND05_RS00955 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ND05_RS00955 PF00128 Alpha amylase, catalytic domain ND05_RS00955 PF18390 Glycogen debranching enzyme C-terminal domain ND05_RS00960 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ND05_RS00960 PF02806 Alpha amylase, C-terminal all-beta domain ND05_RS00960 PF00128 Alpha amylase, catalytic domain ND05_RS00965 PF01118 Semialdehyde dehydrogenase, NAD binding domain ND05_RS00965 PF02774 Semialdehyde dehydrogenase, dimerisation domain ND05_RS00970 PF01914 MarC family integral membrane protein ND05_RS00975 PF02447 GntP family permease ND05_RS00980 PF01202 Shikimate kinase ND05_RS00985 PF00356 Bacterial regulatory proteins, lacI family ND05_RS00985 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND05_RS00990 PF02678 Pirin ND05_RS00990 PF17954 Quercetinase C-terminal cupin domain ND05_RS00995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ND05_RS00995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ND05_RS01005 PF00583 Acetyltransferase (GNAT) family ND05_RS01010 PF05638 Type VI secretion system effector, Hcp ND05_RS01025 PF15567 Immunity protein 35 ND05_RS01035 PF10956 Protein of unknown function (DUF2756) ND05_RS01040 PF03009 Glycerophosphoryl diester phosphodiesterase family ND05_RS01045 PF17912 MalK OB fold domain ND05_RS01045 PF00005 ABC transporter ND05_RS01050 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS01055 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS01060 PF13416 Bacterial extracellular solute-binding protein ND05_RS01070 PF12399 Branched-chain amino acid ATP-binding cassette transporter ND05_RS01070 PF00005 ABC transporter ND05_RS01075 PF02653 Branched-chain amino acid transport system / permease component ND05_RS01075 PF11862 Domain of unknown function (DUF3382) ND05_RS01080 PF02653 Branched-chain amino acid transport system / permease component ND05_RS01085 PF13458 Periplasmic binding protein ND05_RS01090 PF12568 Acetyltransferase (GNAT) domain, PanZ ND05_RS01095 PF13458 Periplasmic binding protein ND05_RS01100 PF04542 Sigma-70 region 2 ND05_RS01100 PF04545 Sigma-70, region 4 ND05_RS01105 PF02687 FtsX-like permease family ND05_RS01105 PF18075 FtsX extracellular domain ND05_RS01110 PF00005 ABC transporter ND05_RS01115 PF02881 SRP54-type protein, helical bundle domain ND05_RS01115 PF00448 SRP54-type protein, GTPase domain ND05_RS01125 PF06611 Protein of unknown function (DUF1145) ND05_RS01130 PF10694 Protein of unknown function (DUF2500) ND05_RS01135 PF07947 YhhN family ND05_RS01140 PF00403 Heavy-metal-associated domain ND05_RS01145 PF01206 Sulfurtransferase TusA ND05_RS01150 PF02592 Putative vitamin uptake transporter ND05_RS01155 PF08786 DcrB ND05_RS01160 PF07690 Major Facilitator Superfamily ND05_RS01165 PF01594 AI-2E family transporter ND05_RS01170 PF01648 4'-phosphopantetheinyl transferase superfamily ND05_RS01175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND05_RS01180 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS01185 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS01190 PF00005 ABC transporter ND05_RS01195 PF00005 ABC transporter ND05_RS01200 PF01402 Ribbon-helix-helix protein, copG family ND05_RS01200 PF08753 NikR C terminal nickel binding domain ND05_RS01220 PF00005 ABC transporter ND05_RS01225 PF13533 Biotin-lipoyl like ND05_RS01230 PF13258 Domain of unknown function (DUF4049) ND05_RS01245 PF10951 Protein of unknown function (DUF2776) ND05_RS01255 PF01384 Phosphate transporter family ND05_RS01260 PF10625 Universal stress protein B (UspB) ND05_RS01265 PF00582 Universal stress protein family ND05_RS01275 PF00854 POT family ND05_RS01280 PF04445 Putative SAM-dependent methyltransferase ND05_RS01285 PF01432 Peptidase family M3 ND05_RS01290 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ND05_RS01295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND05_RS01295 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND05_RS01310 PF01022 Bacterial regulatory protein, arsR family ND05_RS01315 PF02040 Arsenical pump membrane protein ND05_RS01320 PF03960 ArsC family ND05_RS01340 PF03843 Outer membrane lipoprotein Slp family ND05_RS01350 PF00196 Bacterial regulatory proteins, luxR family ND05_RS01355 PF02308 MgtC family ND05_RS01360 PF06411 HdeA/HdeB family ND05_RS01365 PF06411 HdeA/HdeB family ND05_RS01370 PF03729 Short repeat of unknown function (DUF308) ND05_RS01375 PF00196 Bacterial regulatory proteins, luxR family ND05_RS01385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND05_RS01385 PF00529 HlyD membrane-fusion protein of T1SS ND05_RS01390 PF00873 AcrB/AcrD/AcrF family ND05_RS01400 PF12833 Helix-turn-helix domain ND05_RS01405 PF12833 Helix-turn-helix domain ND05_RS01410 PF00282 Pyridoxal-dependent decarboxylase conserved domain ND05_RS01415 PF14376 Haem-binding domain ND05_RS01415 PF00034 Cytochrome c ND05_RS01415 PF03150 Di-haem cytochrome c peroxidase ND05_RS01420 PF01204 Trehalase ND05_RS01425 PF00196 Bacterial regulatory proteins, luxR family ND05_RS01430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS01430 PF03466 LysR substrate binding domain ND05_RS01435 PF03631 Virulence factor BrkB ND05_RS01440 PF00083 Sugar (and other) transporter ND05_RS01440 PF07690 Major Facilitator Superfamily ND05_RS01445 PF05170 AsmA family ND05_RS01450 PF00563 EAL domain ND05_RS01460 PF00294 pfkB family carbohydrate kinase ND05_RS01465 PF05193 Peptidase M16 inactive domain ND05_RS01465 PF00675 Insulinase (Peptidase family M16) ND05_RS01470 PF00375 Sodium:dicarboxylate symporter family ND05_RS01480 PF00563 EAL domain ND05_RS01480 PF17154 Gammaproteobacterial periplasmic sensor domain ND05_RS01480 PF00990 Diguanylate cyclase, GGDEF domain ND05_RS01480 PF00672 HAMP domain ND05_RS01485 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) ND05_RS01490 PF01270 Glycosyl hydrolases family 8 ND05_RS01495 PF03170 Bacterial cellulose synthase subunit ND05_RS01500 PF07238 PilZ domain ND05_RS01500 PF00535 Glycosyl transferase family 2 ND05_RS01500 PF03552 Cellulose synthase ND05_RS01510 PF10945 Cellulose biosynthesis protein BcsR ND05_RS01515 PF10995 Cellulose biosynthesis GIL ND05_RS01520 PF11120 Cellulose biosynthesis protein BcsF ND05_RS01525 PF11658 Cellulose biosynthesis protein BcsG ND05_RS01530 PF13940 Toxin Ldr, type I toxin-antitoxin system ND05_RS01540 PF13940 Toxin Ldr, type I toxin-antitoxin system ND05_RS01555 PF03222 Tryptophan/tyrosine permease family ND05_RS01560 PF00005 ABC transporter ND05_RS01560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND05_RS01565 PF00005 ABC transporter ND05_RS01565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND05_RS01570 PF12911 N-terminal TM domain of oligopeptide transport permease C ND05_RS01570 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS01575 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS01585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND05_RS01600 PF08019 Phosphoethanolamine transferase EptA/EptB ND05_RS01600 PF00884 Sulfatase ND05_RS01605 PF07690 Major Facilitator Superfamily ND05_RS01615 PF03797 Autotransporter beta-domain ND05_RS01620 PF03352 Methyladenine glycosylase ND05_RS01625 PF00583 Acetyltransferase (GNAT) family ND05_RS01630 PF18364 Molybdopterin oxidoreductase N-terminal domain ND05_RS01630 PF00384 Molybdopterin oxidoreductase ND05_RS01630 PF01568 Molydopterin dinucleotide binding domain ND05_RS01635 PF13488 Glycine zipper ND05_RS01635 PF00691 OmpA family ND05_RS01640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND05_RS01640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ND05_RS01645 PF11254 Protein of unknown function (DUF3053) ND05_RS01650 PF01381 Helix-turn-helix ND05_RS01655 PF00313 'Cold-shock' DNA-binding domain ND05_RS01660 PF01848 Hok/gef family ND05_RS01665 PF02092 Glycyl-tRNA synthetase beta subunit ND05_RS01665 PF05746 DALR anticodon binding domain ND05_RS01670 PF02091 Glycyl-tRNA synthetase alpha subunit ND05_RS01675 PF13983 YsaB-like lipoprotein ND05_RS01680 PF01757 Acyltransferase family ND05_RS01685 PF05360 yiaA/B two helix domain ND05_RS01690 PF05360 yiaA/B two helix domain ND05_RS01695 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ND05_RS01695 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ND05_RS01705 PF13407 Periplasmic binding protein domain ND05_RS01715 PF02653 Branched-chain amino acid transport system / permease component ND05_RS01720 PF12833 Helix-turn-helix domain ND05_RS01725 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ND05_RS01730 PF00128 Alpha amylase, catalytic domain ND05_RS01735 PF00155 Aminotransferase class I and II ND05_RS01740 PF13247 4Fe-4S dicluster domain ND05_RS01745 PF09339 IclR helix-turn-helix domain ND05_RS01745 PF01614 Bacterial transcriptional regulator ND05_RS01750 PF02615 Malate/L-lactate dehydrogenase ND05_RS01755 PF04074 YhcH/YjgK/YiaL ND05_RS01760 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ND05_RS01765 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ND05_RS01770 PF03480 Bacterial extracellular solute-binding protein, family 7 ND05_RS01775 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ND05_RS01775 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ND05_RS01780 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ND05_RS01785 PF01261 Xylose isomerase-like TIM barrel ND05_RS01790 PF00596 Class II Aldolase and Adducin N-terminal domain ND05_RS01800 PF06629 MltA-interacting protein MipA ND05_RS01805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS01805 PF03466 LysR substrate binding domain ND05_RS01810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND05_RS01810 PF00529 HlyD membrane-fusion protein of T1SS ND05_RS01815 PF11742 Protein of unknown function (DUF3302) ND05_RS01825 PF00171 Aldehyde dehydrogenase family ND05_RS01830 PF00465 Iron-containing alcohol dehydrogenase ND05_RS01835 PF09107 Elongation factor SelB, winged helix ND05_RS01835 PF00009 Elongation factor Tu GTP binding domain ND05_RS01835 PF03144 Elongation factor Tu domain 2 ND05_RS01835 PF09106 Elongation factor SelB, winged helix ND05_RS01840 PF03841 L-seryl-tRNA selenium transferase ND05_RS01840 PF12390 Selenocysteine synthase N terminal ND05_RS01845 PF13417 Glutathione S-transferase, N-terminal domain ND05_RS01845 PF00043 Glutathione S-transferase, C-terminal domain ND05_RS01850 PF05593 RHS Repeat ND05_RS01850 PF03527 RHS protein ND05_RS01860 PF03527 RHS protein ND05_RS01880 PF15596 Immunity protein 57 ND05_RS01885 PF00529 HlyD membrane-fusion protein of T1SS ND05_RS01885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND05_RS01890 PF11742 Protein of unknown function (DUF3302) ND05_RS01895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND05_RS01895 PF02378 Phosphotransferase system, EIIC ND05_RS01895 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND05_RS01900 PF08125 Mannitol dehydrogenase C-terminal domain ND05_RS01900 PF01232 Mannitol dehydrogenase Rossmann domain ND05_RS01905 PF05068 Mannitol repressor ND05_RS01915 PF10928 Protein of unknown function (DUF2810) ND05_RS01925 PF11622 Protein of unknown function (DUF3251) ND05_RS01930 PF03895 YadA-like membrane anchor domain ND05_RS01930 PF05658 Head domain of trimeric autotransporter adhesin ND05_RS01930 PF13018 Extended Signal Peptide of Type V secretion system ND05_RS01930 PF05662 Coiled stalk of trimeric autotransporter adhesin ND05_RS01940 PF02652 L-lactate permease ND05_RS01945 PF07729 FCD domain ND05_RS01945 PF00392 Bacterial regulatory proteins, gntR family ND05_RS01950 PF07729 FCD domain ND05_RS01950 PF00392 Bacterial regulatory proteins, gntR family ND05_RS01955 PF01070 FMN-dependent dehydrogenase ND05_RS01960 PF00588 SpoU rRNA Methylase family ND05_RS01965 PF06426 Serine acetyltransferase, N-terminal ND05_RS01965 PF00132 Bacterial transferase hexapeptide (six repeats) ND05_RS01970 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ND05_RS01970 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ND05_RS01975 PF02556 Preprotein translocase subunit SecB ND05_RS01980 PF00462 Glutaredoxin ND05_RS01985 PF00581 Rhodanese-like domain ND05_RS01995 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ND05_RS01995 PF01676 Metalloenzyme superfamily ND05_RS02000 PF01551 Peptidase family M23 ND05_RS02005 PF04748 Divergent polysaccharide deacetylase ND05_RS02010 PF00535 Glycosyl transferase family 2 ND05_RS02015 PF00107 Zinc-binding dehydrogenase ND05_RS02015 PF08240 Alcohol dehydrogenase GroES-like domain ND05_RS02020 PF00155 Aminotransferase class I and II ND05_RS02025 PF01370 NAD dependent epimerase/dehydratase family ND05_RS02030 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND05_RS02035 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND05_RS02040 PF04932 O-Antigen ligase ND05_RS02045 PF00535 Glycosyl transferase family 2 ND05_RS02050 PF01501 Glycosyl transferase family 8 ND05_RS02050 PF08437 Glycosyl transferase family 8 C-terminal ND05_RS02055 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) ND05_RS02060 PF08437 Glycosyl transferase family 8 C-terminal ND05_RS02060 PF01501 Glycosyl transferase family 8 ND05_RS02065 PF01501 Glycosyl transferase family 8 ND05_RS02065 PF08437 Glycosyl transferase family 8 C-terminal ND05_RS02075 PF00534 Glycosyl transferases group 1 ND05_RS02075 PF13439 Glycosyltransferase Family 4 ND05_RS02080 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ND05_RS02085 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ND05_RS02090 PF01467 Cytidylyltransferase-like ND05_RS02095 PF06827 Zinc finger found in FPG and IleRS ND05_RS02095 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ND05_RS02095 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ND05_RS02100 PF00471 Ribosomal protein L33 ND05_RS02105 PF00830 Ribosomal L28 family ND05_RS02110 PF04002 RadC-like JAB domain ND05_RS02115 PF02441 Flavoprotein ND05_RS02115 PF04127 DNA / pantothenate metabolism flavoprotein ND05_RS02120 PF00692 dUTPase ND05_RS02125 PF00440 Bacterial regulatory proteins, tetR family ND05_RS02130 PF00156 Phosphoribosyl transferase domain ND05_RS02135 PF01138 3' exoribonuclease family, domain 1 ND05_RS02135 PF03725 3' exoribonuclease family, domain 2 ND05_RS02145 PF08340 Domain of unknown function (DUF1732) ND05_RS02145 PF03755 YicC-like family, N-terminal region ND05_RS02155 PF03458 UPF0126 domain ND05_RS02160 PF03120 NAD-dependent DNA ligase OB-fold domain ND05_RS02160 PF01653 NAD-dependent DNA ligase adenylation domain ND05_RS02165 PF00625 Guanylate kinase ND05_RS02170 PF01192 RNA polymerase Rpb6 ND05_RS02175 PF13291 ACT domain ND05_RS02175 PF04607 Region found in RelA / SpoT proteins ND05_RS02175 PF02824 TGS domain ND05_RS02180 PF12105 SpoU, rRNA methylase, C-terminal ND05_RS02180 PF00588 SpoU rRNA Methylase family ND05_RS02185 PF17191 RecG wedge domain ND05_RS02185 PF00271 Helicase conserved C-terminal domain ND05_RS02185 PF00270 DEAD/DEAH box helicase ND05_RS02195 PF03616 Sodium/glutamate symporter ND05_RS02200 PF00860 Permease family ND05_RS02205 PF05170 AsmA family ND05_RS02210 PF13802 Galactose mutarotase-like ND05_RS02210 PF01055 Glycosyl hydrolases family 31 ND05_RS02230 PF07690 Major Facilitator Superfamily ND05_RS02235 PF00892 EamA-like transporter family ND05_RS02240 PF03180 NLPA lipoprotein ND05_RS02255 PF07690 Major Facilitator Superfamily ND05_RS02265 PF06711 Protein of unknown function (DUF1198) ND05_RS02270 PF00860 Permease family ND05_RS02275 PF01979 Amidohydrolase family ND05_RS02275 PF13382 Adenine deaminase C-terminal domain ND05_RS02280 PF07690 Major Facilitator Superfamily ND05_RS02285 PF07690 Major Facilitator Superfamily ND05_RS02290 PF05231 MASE1 ND05_RS02290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS02290 PF07730 Histidine kinase ND05_RS02295 PF00072 Response regulator receiver domain ND05_RS02295 PF00196 Bacterial regulatory proteins, luxR family ND05_RS02300 PF01842 ACT domain ND05_RS02305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND05_RS02305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND05_RS02305 PF00205 Thiamine pyrophosphate enzyme, central domain ND05_RS02310 PF08049 IlvB leader peptide ND05_RS02330 PF13939 Toxin TisB, type I toxin-antitoxin system ND05_RS02340 PF07690 Major Facilitator Superfamily ND05_RS02350 PF02656 Domain of unknown function (DUF202) ND05_RS02355 PF02656 Domain of unknown function (DUF202) ND05_RS02365 PF00884 Sulfatase ND05_RS02365 PF16347 Domain of unknown function (DUF4976) ND05_RS02370 PF00474 Sodium:solute symporter family ND05_RS02375 PF02311 AraC-like ligand binding domain ND05_RS02375 PF12833 Helix-turn-helix domain ND05_RS02385 PF00367 phosphotransferase system, EIIB ND05_RS02385 PF02378 Phosphotransferase system, EIIC ND05_RS02390 PF07702 UTRA domain ND05_RS02390 PF00392 Bacterial regulatory proteins, gntR family ND05_RS02395 PF06826 Predicted Permease Membrane Region ND05_RS02395 PF02080 TrkA-C domain ND05_RS02400 PF00011 Hsp20/alpha crystallin family ND05_RS02405 PF00011 Hsp20/alpha crystallin family ND05_RS02410 PF07119 Protein of unknown function (DUF1375) ND05_RS02415 PF12566 Protein of unknown function (DUF3748) ND05_RS02415 PF07676 WD40-like Beta Propeller Repeat ND05_RS02420 PF01494 FAD binding domain ND05_RS02425 PF07690 Major Facilitator Superfamily ND05_RS02430 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ND05_RS02430 PF13378 Enolase C-terminal domain-like ND05_RS02435 PF01081 KDPG and KHG aldolase ND05_RS02440 PF05035 2-keto-3-deoxy-galactonokinase ND05_RS02445 PF07729 FCD domain ND05_RS02445 PF00392 Bacterial regulatory proteins, gntR family ND05_RS02460 PF06078 Bacterial protein of unknown function (DUF937) ND05_RS02465 PF01751 Toprim domain ND05_RS02465 PF18053 DNA gyrase B subunit insert domain ND05_RS02465 PF00986 DNA gyrase B subunit, carboxyl terminus ND05_RS02465 PF00204 DNA gyrase B ND05_RS02465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS02470 PF02463 RecF/RecN/SMC N terminal domain ND05_RS02475 PF02768 DNA polymerase III beta subunit, C-terminal domain ND05_RS02475 PF00712 DNA polymerase III beta subunit, N-terminal domain ND05_RS02475 PF02767 DNA polymerase III beta subunit, central domain ND05_RS02480 PF00308 Bacterial dnaA protein ND05_RS02480 PF08299 Bacterial dnaA protein helix-turn-helix ND05_RS02480 PF11638 DnaA N-terminal domain ND05_RS02490 PF00468 Ribosomal protein L34 ND05_RS02495 PF00825 Ribonuclease P ND05_RS02500 PF01809 Putative membrane protein insertion efficiency factor ND05_RS02505 PF02096 60Kd inner membrane protein ND05_RS02505 PF14849 YidC periplasmic domain ND05_RS02510 PF10396 GTP-binding protein TrmE N-terminus ND05_RS02510 PF12631 MnmE helical domain ND05_RS02510 PF01926 50S ribosome-binding GTPase ND05_RS02515 PF08053 Tryptophanase operon leader peptide ND05_RS02520 PF01212 Beta-eliminating lyase ND05_RS02525 PF03222 Tryptophan/tyrosine permease family ND05_RS02530 PF07690 Major Facilitator Superfamily ND05_RS02535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS02535 PF03466 LysR substrate binding domain ND05_RS02545 PF03358 NADPH-dependent FMN reductase ND05_RS02550 PF00860 Permease family ND05_RS02555 PF13419 Haloacid dehalogenase-like hydrolase ND05_RS02575 PF05717 IS66 Orf2 like protein ND05_RS02580 PF13005 zinc-finger binding domain of transposase IS66 ND05_RS02580 PF03050 Transposase IS66 family ND05_RS02580 PF13817 IS66 C-terminal element ND05_RS02580 PF13007 Transposase C of IS166 homeodomain ND05_RS02590 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ND05_RS02595 PF00756 Putative esterase ND05_RS02595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ND05_RS02600 PF02264 LamB porin ND05_RS02600 PF11471 Maltoporin periplasmic N-terminal extension ND05_RS02605 PF00232 Glycosyl hydrolase family 1 ND05_RS02615 PF03123 CAT RNA binding domain ND05_RS02615 PF00874 PRD domain ND05_RS02620 PF01895 PhoU domain ND05_RS02625 PF00005 ABC transporter ND05_RS02630 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS02635 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS02640 PF12849 PBP superfamily domain ND05_RS02655 PF02753 Pili assembly chaperone PapD, C-terminal domain ND05_RS02655 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND05_RS02660 PF00419 Fimbrial protein ND05_RS02665 PF01380 SIS domain ND05_RS02670 PF12804 MobA-like NTP transferase domain ND05_RS02670 PF14602 Hexapeptide repeat of succinyl-transferase ND05_RS02670 PF00132 Bacterial transferase hexapeptide (six repeats) ND05_RS02680 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ND05_RS02680 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ND05_RS02685 PF02874 ATP synthase alpha/beta family, beta-barrel domain ND05_RS02685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND05_RS02690 PF00231 ATP synthase ND05_RS02695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND05_RS02695 PF02874 ATP synthase alpha/beta family, beta-barrel domain ND05_RS02695 PF00306 ATP synthase alpha/beta chain, C terminal domain ND05_RS02700 PF00213 ATP synthase delta (OSCP) subunit ND05_RS02705 PF00430 ATP synthase B/B' CF(0) ND05_RS02710 PF00137 ATP synthase subunit C ND05_RS02715 PF00119 ATP synthase A chain ND05_RS02720 PF03899 ATP synthase I chain ND05_RS02725 PF02527 rRNA small subunit methyltransferase G ND05_RS02730 PF01134 Glucose inhibited division protein A ND05_RS02730 PF13932 GidA associated domain ND05_RS02735 PF00258 Flavodoxin ND05_RS02740 PF01037 Lrp/AsnC ligand binding domain ND05_RS02745 PF03590 Aspartate-ammonia ligase ND05_RS02750 PF05762 VWA domain containing CoxE-like protein ND05_RS02755 PF12592 Protein of unknown function (DUF3763) ND05_RS02755 PF07728 AAA domain (dynein-related subfamily) ND05_RS02755 PF17868 AAA lid domain ND05_RS02760 PF02705 K+ potassium transporter ND05_RS02765 PF05025 RbsD / FucU transport protein family ND05_RS02770 PF00005 ABC transporter ND05_RS02775 PF02653 Branched-chain amino acid transport system / permease component ND05_RS02780 PF13407 Periplasmic binding protein domain ND05_RS02785 PF00294 pfkB family carbohydrate kinase ND05_RS02790 PF00356 Bacterial regulatory proteins, lacI family ND05_RS02795 PF07690 Major Facilitator Superfamily ND05_RS02800 PF07729 FCD domain ND05_RS02800 PF00392 Bacterial regulatory proteins, gntR family ND05_RS02835 PF03466 LysR substrate binding domain ND05_RS02835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS02840 PF04219 Protein of unknown function, DUF ND05_RS02855 PF08046 IlvGEDA operon leader peptide ND05_RS02865 PF00205 Thiamine pyrophosphate enzyme, central domain ND05_RS02865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND05_RS02865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND05_RS02875 PF01063 Amino-transferase class IV ND05_RS02880 PF00920 Dehydratase family ND05_RS02885 PF00585 C-terminal regulatory domain of Threonine dehydratase ND05_RS02885 PF00291 Pyridoxal-phosphate dependent enzyme ND05_RS02890 PF03466 LysR substrate binding domain ND05_RS02890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS02895 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ND05_RS02895 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ND05_RS02905 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ND05_RS02910 PF13361 UvrD-like helicase C-terminal domain ND05_RS02910 PF00580 UvrD/REP helicase N-terminal domain ND05_RS02915 PF02541 Ppx/GppA phosphatase family ND05_RS02925 PF00270 DEAD/DEAH box helicase ND05_RS02925 PF00271 Helicase conserved C-terminal domain ND05_RS02930 PF00085 Thioredoxin ND05_RS02940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND05_RS02940 PF07498 Rho termination factor, N-terminal domain ND05_RS02940 PF07497 Rho termination factor, RNA-binding domain ND05_RS02950 PF00953 Glycosyl transferase family 4 ND05_RS02955 PF02706 Chain length determinant protein ND05_RS02960 PF02350 UDP-N-acetylglucosamine 2-epimerase ND05_RS02965 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ND05_RS02965 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ND05_RS02965 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ND05_RS02970 PF16363 GDP-mannose 4,6 dehydratase ND05_RS02975 PF00483 Nucleotidyl transferase ND05_RS02985 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ND05_RS02990 PF01943 Polysaccharide biosynthesis protein ND05_RS02995 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 ND05_RS03000 PF06899 WzyE protein, O-antigen assembly polymerase ND05_RS03005 PF03808 Glycosyl transferase WecB/TagA/CpsF family ND05_RS03010 PF00324 Amino acid permease ND05_RS03035 PF13186 Iron-sulfur cluster-binding domain ND05_RS03035 PF04055 Radical SAM superfamily ND05_RS03040 PF07719 Tetratricopeptide repeat ND05_RS03040 PF07219 HemY protein N-terminus ND05_RS03045 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ND05_RS03050 PF02602 Uroporphyrinogen-III synthase HemD ND05_RS03055 PF03900 Porphobilinogen deaminase, C-terminal domain ND05_RS03055 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ND05_RS03065 PF01295 Adenylate cyclase, class-I ND05_RS03065 PF12633 Adenylate cyclase NT domain ND05_RS03070 PF01491 Frataxin-like domain ND05_RS03075 PF13627 Prokaryotic lipoprotein-attachment site ND05_RS03080 PF01678 Diaminopimelate epimerase ND05_RS03085 PF04340 Protein of unknown function, DUF484 ND05_RS03090 PF00589 Phage integrase family ND05_RS03090 PF02899 Phage integrase, N-terminal SAM-like domain ND05_RS03095 PF13419 Haloacid dehalogenase-like hydrolase ND05_RS03100 PF13361 UvrD-like helicase C-terminal domain ND05_RS03100 PF00580 UvrD/REP helicase N-terminal domain ND05_RS03105 PF09992 Phosphodiester glycosidase ND05_RS03110 PF01544 CorA-like Mg2+ transporter protein ND05_RS03125 PF01544 CorA-like Mg2+ transporter protein ND05_RS03140 PF00892 EamA-like transporter family ND05_RS03145 PF03061 Thioesterase superfamily ND05_RS03150 PF02253 Phospholipase A1 ND05_RS03155 PF00570 HRDC domain ND05_RS03155 PF00270 DEAD/DEAH box helicase ND05_RS03155 PF00271 Helicase conserved C-terminal domain ND05_RS03155 PF16124 RecQ zinc-binding ND05_RS03155 PF09382 RQC domain ND05_RS03160 PF01810 LysE type translocator ND05_RS03165 PF01810 LysE type translocator ND05_RS03170 PF12146 Serine aminopeptidase, S33 ND05_RS03180 PF00892 EamA-like transporter family ND05_RS03185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS03185 PF03466 LysR substrate binding domain ND05_RS03190 PF08267 Cobalamin-independent synthase, N-terminal domain ND05_RS03190 PF01717 Cobalamin-independent synthase, Catalytic domain ND05_RS03205 PF01738 Dienelactone hydrolase family ND05_RS03210 PF01048 Phosphorylase superfamily ND05_RS03215 PF02646 RmuC family ND05_RS03220 PF01209 ubiE/COQ5 methyltransferase family ND05_RS03225 PF02036 SCP-2 sterol transfer family ND05_RS03230 PF03109 ABC1 family ND05_RS03235 PF02416 mttA/Hcf106 family ND05_RS03245 PF00902 Sec-independent protein translocase protein (TatC) ND05_RS03250 PF01026 TatD related DNase ND05_RS03255 PF02357 Transcription termination factor nusG ND05_RS03260 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ND05_RS03265 PF00970 Oxidoreductase FAD-binding domain ND05_RS03265 PF00175 Oxidoreductase NAD-binding domain ND05_RS03270 PF00108 Thiolase, N-terminal domain ND05_RS03270 PF02803 Thiolase, C-terminal domain ND05_RS03275 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ND05_RS03275 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ND05_RS03275 PF00378 Enoyl-CoA hydratase/isomerase ND05_RS03280 PF00557 Metallopeptidase family M24 ND05_RS03285 PF09186 Domain of unknown function (DUF1949) ND05_RS03285 PF01205 Uncharacterized protein family UPF0029 ND05_RS03290 PF02386 Cation transport protein ND05_RS03295 PF12724 Flavodoxin domain ND05_RS03325 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ND05_RS03330 PF12804 MobA-like NTP transferase domain ND05_RS03335 PF06288 Protein of unknown function (DUF1040) ND05_RS03340 PF01636 Phosphotransferase enzyme family ND05_RS03345 PF01323 DSBA-like thioredoxin domain ND05_RS03350 PF06097 Bacterial protein of unknown function (DUF945) ND05_RS03355 PF01553 Acyltransferase ND05_RS03365 PF01367 5'-3' exonuclease, C-terminal SAM fold ND05_RS03365 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ND05_RS03365 PF00476 DNA polymerase family A ND05_RS03365 PF01612 3'-5' exonuclease ND05_RS03370 PF01926 50S ribosome-binding GTPase ND05_RS03375 PF04220 Der GTPase activator (YihI) ND05_RS03380 PF06969 HemN C-terminal domain ND05_RS03380 PF04055 Radical SAM superfamily ND05_RS03390 PF00072 Response regulator receiver domain ND05_RS03390 PF02954 Bacterial regulatory protein, Fis family ND05_RS03390 PF00158 Sigma-54 interaction domain ND05_RS03395 PF00989 PAS fold ND05_RS03395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS03395 PF00512 His Kinase A (phospho-acceptor) domain ND05_RS03400 PF00120 Glutamine synthetase, catalytic domain ND05_RS03400 PF03951 Glutamine synthetase, beta-Grasp domain ND05_RS03410 PF03144 Elongation factor Tu domain 2 ND05_RS03410 PF00679 Elongation factor G C-terminus ND05_RS03410 PF00009 Elongation factor Tu GTP binding domain ND05_RS03415 PF00455 DeoR C terminal sensor domain ND05_RS03415 PF08220 DeoR-like helix-turn-helix domain ND05_RS03420 PF00294 pfkB family carbohydrate kinase ND05_RS03425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ND05_RS03425 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ND05_RS03430 PF01791 DeoC/LacD family aldolase ND05_RS03435 PF00107 Zinc-binding dehydrogenase ND05_RS03435 PF08240 Alcohol dehydrogenase GroES-like domain ND05_RS03445 PF07690 Major Facilitator Superfamily ND05_RS03445 PF00083 Sugar (and other) transporter ND05_RS03455 PF13419 Haloacid dehalogenase-like hydrolase ND05_RS03460 PF03631 Virulence factor BrkB ND05_RS03465 PF02580 D-Tyr-tRNA(Tyr) deacylase ND05_RS03470 PF00583 Acetyltransferase (GNAT) family ND05_RS03470 PF09500 Putative thioesterase (yiiD_Cterm) ND05_RS03495 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system ND05_RS03510 PF01402 Ribbon-helix-helix protein, copG family ND05_RS03520 PF04216 Protein involved in formate dehydrogenase formation ND05_RS03525 PF01292 Prokaryotic cytochrome b561 ND05_RS03530 PF09163 Formate dehydrogenase N, transmembrane ND05_RS03530 PF13247 4Fe-4S dicluster domain ND05_RS03545 PF02634 FdhD/NarQ family ND05_RS03550 PF12889 Protein of unknown function (DUF3829) ND05_RS03555 PF08279 HTH domain ND05_RS03555 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND05_RS03560 PF05343 M42 glutamyl aminopeptidase ND05_RS03565 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND05_RS03565 PF02378 Phosphotransferase system, EIIC ND05_RS03570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND05_RS03575 PF05336 L-rhamnose mutarotase ND05_RS03580 PF00596 Class II Aldolase and Adducin N-terminal domain ND05_RS03585 PF06134 L-rhamnose isomerase (RhaA) ND05_RS03590 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ND05_RS03590 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ND05_RS03595 PF12833 Helix-turn-helix domain ND05_RS03595 PF02311 AraC-like ligand binding domain ND05_RS03600 PF02311 AraC-like ligand binding domain ND05_RS03600 PF12833 Helix-turn-helix domain ND05_RS03605 PF06379 L-rhamnose-proton symport protein (RhaT) ND05_RS03610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ND05_RS03610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ND05_RS03625 PF03812 2-keto-3-deoxygluconate permease ND05_RS03630 PF03473 MOSC domain ND05_RS03630 PF03475 3-alpha domain ND05_RS03635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS03635 PF00672 HAMP domain ND05_RS03635 PF16527 Two-component sensor protein CpxA, periplasmic domain ND05_RS03635 PF00512 His Kinase A (phospho-acceptor) domain ND05_RS03640 PF00072 Response regulator receiver domain ND05_RS03640 PF00486 Transcriptional regulatory protein, C terminal ND05_RS03645 PF07813 LTXXQ motif family protein ND05_RS03650 PF16916 Dimerisation domain of Zinc Transporter ND05_RS03650 PF01545 Cation efflux family ND05_RS03655 PF00365 Phosphofructokinase ND05_RS03665 PF02611 CDP-diacylglycerol pyrophosphatase ND05_RS03670 PF00121 Triosephosphate isomerase ND05_RS03675 PF07305 Protein of unknown function (DUF1454) ND05_RS03680 PF05656 Protein of unknown function (DUF805) ND05_RS03685 PF04175 Protein of unknown function (DUF406) ND05_RS03690 PF00582 Universal stress protein family ND05_RS03695 PF00175 Oxidoreductase NAD-binding domain ND05_RS03695 PF00970 Oxidoreductase FAD-binding domain ND05_RS03700 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ND05_RS03705 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ND05_RS03705 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ND05_RS03710 PF00230 Major intrinsic protein ND05_RS03715 PF06005 Cell division protein ZapB ND05_RS03720 PF03737 Aldolase/RraA ND05_RS03725 PF01040 UbiA prenyltransferase family ND05_RS03730 PF00004 ATPase family associated with various cellular activities (AAA) ND05_RS03730 PF07724 AAA domain (Cdc48 subfamily) ND05_RS03730 PF10431 C-terminal, D2-small domain, of ClpB protein ND05_RS03735 PF00227 Proteasome subunit ND05_RS03740 PF05036 Sporulation related domain ND05_RS03745 PF00356 Bacterial regulatory proteins, lacI family ND05_RS03750 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ND05_RS03750 PF17764 3′ DNA-binding domain (3′BD) ND05_RS03750 PF00270 DEAD/DEAH box helicase ND05_RS03750 PF00271 Helicase conserved C-terminal domain ND05_RS03750 PF18074 Primosomal protein N C-terminal domain ND05_RS03755 PF01197 Ribosomal protein L31 ND05_RS03760 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ND05_RS03765 PF01340 Met Apo-repressor, MetJ ND05_RS03770 PF01053 Cys/Met metabolism PLP-dependent enzyme ND05_RS03775 PF03447 Homoserine dehydrogenase, NAD binding domain ND05_RS03775 PF00742 Homoserine dehydrogenase ND05_RS03775 PF00696 Amino acid kinase family ND05_RS03780 PF02219 Methylenetetrahydrofolate reductase ND05_RS03785 PF00141 Peroxidase ND05_RS03790 PF00892 EamA-like transporter family ND05_RS03795 PF06940 Domain of unknown function (DUF1287) ND05_RS03800 PF00465 Iron-containing alcohol dehydrogenase ND05_RS03805 PF00923 Transaldolase/Fructose-6-phosphate aldolase ND05_RS03810 PF00391 PEP-utilising enzyme, mobile domain ND05_RS03810 PF02896 PEP-utilising enzyme, TIM barrel domain ND05_RS03810 PF05524 PEP-utilising enzyme, N-terminal ND05_RS03810 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND05_RS03810 PF00381 PTS HPr component phosphorylation site ND05_RS03820 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND05_RS03825 PF02901 Pyruvate formate lyase-like ND05_RS03825 PF01228 Glycine radical ND05_RS03830 PF04055 Radical SAM superfamily ND05_RS03835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND05_RS03840 PF12833 Helix-turn-helix domain ND05_RS03845 PF00884 Sulfatase ND05_RS03850 PF00311 Phosphoenolpyruvate carboxylase ND05_RS03855 PF07687 Peptidase dimerisation domain ND05_RS03855 PF01546 Peptidase family M20/M25/M40 ND05_RS03860 PF02774 Semialdehyde dehydrogenase, dimerisation domain ND05_RS03860 PF01118 Semialdehyde dehydrogenase, NAD binding domain ND05_RS03865 PF00696 Amino acid kinase family ND05_RS03870 PF14698 Argininosuccinate lyase C-terminal ND05_RS03870 PF00206 Lyase ND05_RS03875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS03875 PF03466 LysR substrate binding domain ND05_RS03880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND05_RS03880 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND05_RS03885 PF00440 Bacterial regulatory proteins, tetR family ND05_RS03890 PF07226 Protein of unknown function (DUF1422) ND05_RS03895 PF05958 tRNA (Uracil-5-)-methyltransferase ND05_RS03900 PF00593 TonB dependent receptor ND05_RS03900 PF07715 TonB-dependent Receptor Plug Domain ND05_RS03905 PF01177 Asp/Glu/Hydantoin racemase ND05_RS03930 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ND05_RS03930 PF01565 FAD binding domain ND05_RS03935 PF02237 Biotin protein ligase C terminal domain ND05_RS03935 PF03099 Biotin/lipoate A/B protein ligase family ND05_RS03935 PF08279 HTH domain ND05_RS03940 PF00485 Phosphoribulokinase / Uridine kinase family ND05_RS03975 PF00009 Elongation factor Tu GTP binding domain ND05_RS03975 PF03144 Elongation factor Tu domain 2 ND05_RS03975 PF03143 Elongation factor Tu C-terminal domain ND05_RS03980 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ND05_RS03985 PF00467 KOW motif ND05_RS03985 PF02357 Transcription termination factor nusG ND05_RS03990 PF00298 Ribosomal protein L11, RNA binding domain ND05_RS03990 PF03946 Ribosomal protein L11, N-terminal domain ND05_RS03995 PF00687 Ribosomal protein L1p/L10e family ND05_RS04005 PF00466 Ribosomal protein L10 ND05_RS04010 PF00542 Ribosomal protein L7/L12 C-terminal domain ND05_RS04010 PF16320 Ribosomal protein L7/L12 dimerisation domain ND05_RS04015 PF04563 RNA polymerase beta subunit ND05_RS04015 PF04561 RNA polymerase Rpb2, domain 2 ND05_RS04015 PF04565 RNA polymerase Rpb2, domain 3 ND05_RS04015 PF00562 RNA polymerase Rpb2, domain 6 ND05_RS04015 PF10385 RNA polymerase beta subunit external 1 domain ND05_RS04015 PF04560 RNA polymerase Rpb2, domain 7 ND05_RS04020 PF05000 RNA polymerase Rpb1, domain 4 ND05_RS04020 PF04998 RNA polymerase Rpb1, domain 5 ND05_RS04020 PF00623 RNA polymerase Rpb1, domain 2 ND05_RS04020 PF04997 RNA polymerase Rpb1, domain 1 ND05_RS04020 PF04983 RNA polymerase Rpb1, domain 3 ND05_RS04030 PF04055 Radical SAM superfamily ND05_RS04030 PF06968 Biotin and Thiamin Synthesis associated domain ND05_RS04035 PF05690 Thiazole biosynthesis protein ThiG ND05_RS04040 PF02597 ThiS family ND05_RS04045 PF00899 ThiF family ND05_RS04050 PF02581 Thiamine monophosphate synthase ND05_RS04055 PF13667 ThiC-associated domain ND05_RS04055 PF01964 Radical SAM ThiC family ND05_RS04060 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ND05_RS04065 PF09297 NADH pyrophosphatase zinc ribbon domain ND05_RS04065 PF00293 NUDIX domain ND05_RS04070 PF01208 Uroporphyrinogen decarboxylase (URO-D) ND05_RS04080 PF04493 Endonuclease V ND05_RS04085 PF04222 Protein of unknown function (DUF416) ND05_RS04090 PF00216 Bacterial DNA-binding protein ND05_RS04095 PF07356 Protein of unknown function (DUF1481) ND05_RS04100 PF13801 Heavy-metal resistance ND05_RS04110 PF00512 His Kinase A (phospho-acceptor) domain ND05_RS04110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS04115 PF00158 Sigma-54 interaction domain ND05_RS04115 PF02954 Bacterial regulatory protein, Fis family ND05_RS04115 PF00072 Response regulator receiver domain ND05_RS04120 PF02844 Phosphoribosylglycinamide synthetase, N domain ND05_RS04120 PF02843 Phosphoribosylglycinamide synthetase, C domain ND05_RS04120 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ND05_RS04125 PF02142 MGS-like domain ND05_RS04125 PF01808 AICARFT/IMPCHase bienzyme ND05_RS04155 PF13673 Acetyltransferase (GNAT) domain ND05_RS04160 PF04204 Homoserine O-succinyltransferase ND05_RS04170 PF00463 Isocitrate lyase family ND05_RS04175 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ND05_RS04185 PF09339 IclR helix-turn-helix domain ND05_RS04185 PF01614 Bacterial transcriptional regulator ND05_RS04190 PF02310 B12 binding domain ND05_RS04190 PF02965 Vitamin B12 dependent methionine synthase, activation domain ND05_RS04190 PF02574 Homocysteine S-methyltransferase ND05_RS04190 PF02607 B12 binding domain ND05_RS04190 PF00809 Pterin binding enzyme ND05_RS04195 PF02690 Na+/Pi-cotransporter ND05_RS04200 PF03575 Peptidase family S51 ND05_RS04205 PF00107 Zinc-binding dehydrogenase ND05_RS04205 PF08240 Alcohol dehydrogenase GroES-like domain ND05_RS04210 PF03613 PTS system mannose/fructose/sorbose family IID component ND05_RS04215 PF03609 PTS system sorbose-specific iic component ND05_RS04220 PF03830 PTS system sorbose subfamily IIB component ND05_RS04225 PF03610 PTS system fructose IIA component ND05_RS04230 PF00106 short chain dehydrogenase ND05_RS04235 PF04198 Putative sugar-binding domain ND05_RS04235 PF13936 Helix-turn-helix domain ND05_RS04240 PF01479 S4 domain ND05_RS04240 PF00849 RNA pseudouridylate synthase ND05_RS04245 PF11656 YjbD family (DUF3811) ND05_RS04250 PF01842 ACT domain ND05_RS04250 PF00696 Amino acid kinase family ND05_RS04265 PF00342 Phosphoglucose isomerase ND05_RS04270 PF11106 Exopolysaccharide production protein YjbE ND05_RS04275 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF ND05_RS04280 PF06251 Capsule biosynthesis GfcC ND05_RS04285 PF06082 Exopolysaccharide biosynthesis protein YbjH ND05_RS04290 PF17089 Uncharacterised protein family ND05_RS04295 PF06146 Phosphate-starvation-inducible E ND05_RS04300 PF00083 Sugar (and other) transporter ND05_RS04305 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS04310 PF14785 Maltose transport system permease protein MalF P2 domain ND05_RS04310 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS04315 PF01547 Bacterial extracellular solute-binding protein ND05_RS04325 PF17912 MalK OB fold domain ND05_RS04325 PF00005 ABC transporter ND05_RS04330 PF02264 LamB porin ND05_RS04335 PF07148 Maltose operon periplasmic protein precursor (MalM) ND05_RS04355 PF04345 Chorismate lyase ND05_RS04360 PF01040 UbiA prenyltransferase family ND05_RS04365 PF01553 Acyltransferase ND05_RS04370 PF01219 Prokaryotic diacylglycerol kinase ND05_RS04375 PF01726 LexA DNA binding domain ND05_RS04375 PF00717 Peptidase S24-like ND05_RS04380 PF01554 MatE ND05_RS04385 PF05532 CsbD-like ND05_RS04390 PF01475 Ferric uptake regulator family ND05_RS04395 PF10897 Protein of unknown function (DUF2713) ND05_RS04400 PF01207 Dihydrouridine synthase (Dus) ND05_RS04490 PF00717 Peptidase S24-like ND05_RS04490 PF01381 Helix-turn-helix ND05_RS04505 PF10549 ORF11CD3 domain ND05_RS04505 PF09669 Phage regulatory protein Rha (Phage_pRha) ND05_RS04525 PF01695 IstB-like ATP binding protein ND05_RS04530 PF03796 DnaB-like helicase C terminal domain ND05_RS04530 PF00772 DnaB-like helicase N terminal domain ND05_RS04540 PF06147 Protein of unknown function (DUF968) ND05_RS04590 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ND05_RS04595 PF04971 Bacteriophage P21 holin S ND05_RS04600 PF07041 Protein of unknown function (DUF1327) ND05_RS04605 PF00959 Phage lysozyme ND05_RS04615 PF03245 Bacteriophage Rz lysis protein ND05_RS04625 PF06069 PerC transcriptional activator ND05_RS04630 PF13132 Domain of unknown function (DUF3950) ND05_RS04640 PF07471 Phage DNA packaging protein Nu1 ND05_RS04645 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND05_RS04650 PF02831 gpW ND05_RS04660 PF01972 Serine dehydrogenase proteinase ND05_RS04660 PF01957 NfeD-like C-terminal, partner-binding ND05_RS04670 PF03864 Phage major capsid protein E ND05_RS04740 PF06316 Enterobacterial Ail/Lom protein ND05_RS04745 PF08400 Prophage tail fibre N-terminal ND05_RS04745 PF07484 Phage Tail Collar Domain ND05_RS04745 PF03335 Phage tail fibre repeat ND05_RS04795 PF06183 DinI-like family ND05_RS04805 PF01207 Dihydrouridine synthase (Dus) ND05_RS04810 PF09583 Phage shock protein G (Phageshock_PspG) ND05_RS04820 PF00772 DnaB-like helicase N terminal domain ND05_RS04820 PF03796 DnaB-like helicase C terminal domain ND05_RS04825 PF00842 Alanine racemase, C-terminal domain ND05_RS04825 PF01168 Alanine racemase, N-terminal domain ND05_RS04830 PF00155 Aminotransferase class I and II ND05_RS04840 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) ND05_RS04845 PF01894 Uncharacterised protein family UPF0047 ND05_RS04850 PF04237 YjbR ND05_RS04855 PF17760 UvrA interaction domain ND05_RS04855 PF17755 UvrA DNA-binding domain ND05_RS04855 PF00005 ABC transporter ND05_RS04865 PF00436 Single-strand binding protein family ND05_RS04870 PF15940 Family of unknown function ND05_RS04880 PF00563 EAL domain ND05_RS04880 PF12792 CSS motif domain associated with EAL ND05_RS04885 PF12833 Helix-turn-helix domain ND05_RS04890 PF09278 MerR, DNA binding ND05_RS04890 PF00376 MerR family regulatory protein ND05_RS04910 PF00860 Permease family ND05_RS04915 PF00999 Sodium/hydrogen exchanger family ND05_RS04925 PF00474 Sodium:solute symporter family ND05_RS04930 PF04341 Protein of unknown function, DUF485 ND05_RS04935 PF00501 AMP-binding enzyme ND05_RS04935 PF16177 Acetyl-coenzyme A synthetase N-terminus ND05_RS04935 PF13193 AMP-binding enzyme C-terminal domain ND05_RS04945 PF02335 Cytochrome c552 ND05_RS04950 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) ND05_RS04950 PF13435 Cytochrome c554 and c-prime ND05_RS04955 PF13247 4Fe-4S dicluster domain ND05_RS04955 PF00037 4Fe-4S binding domain ND05_RS04960 PF03916 Polysulphide reductase, NrfD ND05_RS04965 PF01578 Cytochrome C assembly protein ND05_RS04965 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ND05_RS04970 PF03918 Cytochrome C biogenesis protein ND05_RS04985 PF00375 Sodium:dicarboxylate symporter family ND05_RS04990 PF08238 Sel1 repeat ND05_RS05000 PF02321 Outer membrane efflux protein ND05_RS05005 PF04632 Fusaric acid resistance protein family ND05_RS05010 PF00529 HlyD membrane-fusion protein of T1SS ND05_RS05010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND05_RS05020 PF14864 Alkyl sulfatase C-terminal ND05_RS05020 PF14863 Alkyl sulfatase dimerisation ND05_RS05020 PF00753 Metallo-beta-lactamase superfamily ND05_RS05025 PF00480 ROK family ND05_RS05030 PF00834 Ribulose-phosphate 3 epimerase family ND05_RS05035 PF02653 Branched-chain amino acid transport system / permease component ND05_RS05040 PF00005 ABC transporter ND05_RS05045 PF13407 Periplasmic binding protein domain ND05_RS05050 PF01418 Helix-turn-helix domain, rpiR family ND05_RS05050 PF01380 SIS domain ND05_RS05060 PF02502 Ribose/Galactose Isomerase ND05_RS05070 PF12706 Beta-lactamase superfamily domain ND05_RS05075 PF00583 Acetyltransferase (GNAT) family ND05_RS05085 PF07969 Amidohydrolase family ND05_RS05090 PF00005 ABC transporter ND05_RS05095 PF00005 ABC transporter ND05_RS05100 PF06007 Phosphonate metabolism protein PhnJ ND05_RS05105 PF05861 Bacterial phosphonate metabolism protein (PhnI) ND05_RS05110 PF05845 Bacterial phosphonate metabolism protein (PhnH) ND05_RS05115 PF06754 Phosphonate metabolism protein PhnG ND05_RS05120 PF07702 UTRA domain ND05_RS05120 PF00392 Bacterial regulatory proteins, gntR family ND05_RS05125 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS05135 PF00005 ABC transporter ND05_RS05140 PF06983 3-demethylubiquinone-9 3-methyltransferase ND05_RS05145 PF08274 PhnA Zinc-Ribbon ND05_RS05145 PF03831 PhnA domain ND05_RS05155 PF00350 Dynamin family ND05_RS05160 PF13990 YjcZ-like protein ND05_RS05165 PF08946 Osmosensory transporter coiled coil ND05_RS05165 PF00083 Sugar (and other) transporter ND05_RS05175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS05175 PF00512 His Kinase A (phospho-acceptor) domain ND05_RS05180 PF00486 Transcriptional regulatory protein, C terminal ND05_RS05180 PF00072 Response regulator receiver domain ND05_RS05185 PF08019 Phosphoethanolamine transferase EptA/EptB ND05_RS05185 PF00884 Sulfatase ND05_RS05190 PF13520 Amino acid permease ND05_RS05195 PF12833 Helix-turn-helix domain ND05_RS05200 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ND05_RS05200 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ND05_RS05200 PF01276 Orn/Lys/Arg decarboxylase, major domain ND05_RS05205 PF12833 Helix-turn-helix domain ND05_RS05210 PF02056 Family 4 glycosyl hydrolase ND05_RS05210 PF11975 Family 4 glycosyl hydrolase C-terminal domain ND05_RS05225 PF09997 Predicted membrane protein (DUF2238) ND05_RS05230 PF05683 Fumarase C-terminus ND05_RS05230 PF05681 Fumarate hydratase (Fumerase) ND05_RS05235 PF03605 Anaerobic c4-dicarboxylate membrane transporter ND05_RS05250 PF00072 Response regulator receiver domain ND05_RS05255 PF00989 PAS fold ND05_RS05255 PF17203 Single cache domain 3 ND05_RS05255 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ND05_RS05255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS05260 PF06902 Divergent 4Fe-4S mono-cluster ND05_RS05265 PF14542 GCN5-related N-acetyl-transferase ND05_RS05275 PF11080 Endoribonuclease GhoS ND05_RS05280 PF10753 Toxin GhoT_OrtT ND05_RS05285 PF01336 OB-fold nucleic acid binding domain ND05_RS05285 PF00152 tRNA synthetases class II (D, K and N) ND05_RS05290 PF00854 POT family ND05_RS05295 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ND05_RS05295 PF01276 Orn/Lys/Arg decarboxylase, major domain ND05_RS05295 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ND05_RS05300 PF13520 Amino acid permease ND05_RS05305 PF00486 Transcriptional regulatory protein, C terminal ND05_RS05305 PF18500 CadC C-terminal domain 1 ND05_RS05310 PF13005 zinc-finger binding domain of transposase IS66 ND05_RS05310 PF13007 Transposase C of IS166 homeodomain ND05_RS05310 PF13817 IS66 C-terminal element ND05_RS05310 PF03050 Transposase IS66 family ND05_RS05315 PF05717 IS66 Orf2 like protein ND05_RS05405 PF06316 Enterobacterial Ail/Lom protein ND05_RS05420 PF05717 IS66 Orf2 like protein ND05_RS05440 PF13356 Arm DNA-binding domain ND05_RS05440 PF00589 Phage integrase family ND05_RS05455 PF11412 Disulphide bond corrector protein DsbC ND05_RS05455 PF02683 Cytochrome C biogenesis protein transmembrane region ND05_RS05460 PF03091 CutA1 divalent ion tolerance protein ND05_RS05465 PF03605 Anaerobic c4-dicarboxylate membrane transporter ND05_RS05470 PF00206 Lyase ND05_RS05470 PF10415 Fumarase C C-terminus ND05_RS05475 PF04186 FxsA cytoplasmic membrane protein ND05_RS05480 PF13520 Amino acid permease ND05_RS05485 PF00166 Chaperonin 10 Kd subunit ND05_RS05490 PF00118 TCP-1/cpn60 chaperonin family ND05_RS05495 PF13698 Domain of unknown function (DUF4156) ND05_RS05505 PF04055 Radical SAM superfamily ND05_RS05510 PF08207 Elongation factor P (EF-P) KOW-like domain ND05_RS05510 PF09285 Elongation factor P, C-terminal ND05_RS05510 PF01132 Elongation factor P (EF-P) OB domain ND05_RS05515 PF08085 Entericidin EcnA/B family ND05_RS05520 PF08085 Entericidin EcnA/B family ND05_RS05525 PF00893 Small Multidrug Resistance protein ND05_RS05530 PF08212 Lipocalin-like domain ND05_RS05535 PF00144 Beta-lactamase ND05_RS05540 PF02313 Fumarate reductase subunit D ND05_RS05545 PF02300 Fumarate reductase subunit C ND05_RS05550 PF13183 4Fe-4S dicluster domain ND05_RS05550 PF13085 2Fe-2S iron-sulfur cluster binding domain ND05_RS05555 PF00890 FAD binding domain ND05_RS05555 PF02910 Fumarate reductase flavoprotein C-term ND05_RS05560 PF00152 tRNA synthetases class II (D, K and N) ND05_RS05565 PF13520 Amino acid permease ND05_RS05575 PF10840 Protein of unknown function (DUF2645) ND05_RS05580 PF12794 Mechanosensitive ion channel inner membrane domain 1 ND05_RS05580 PF00924 Mechanosensitive ion channel ND05_RS05580 PF12795 Mechanosensitive ion channel porin domain ND05_RS05585 PF02666 Phosphatidylserine decarboxylase ND05_RS05590 PF03193 RsgA GTPase ND05_RS05595 PF00929 Exonuclease ND05_RS05620 PF08331 Domain of unknown function (DUF1730) ND05_RS05625 PF03853 YjeF-related protein N-terminus ND05_RS05625 PF01256 Carbohydrate kinase ND05_RS05630 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ND05_RS05635 PF01520 N-acetylmuramoyl-L-alanine amidase ND05_RS05640 PF01119 DNA mismatch repair protein, C-terminal domain ND05_RS05640 PF08676 MutL C terminal dimerisation domain ND05_RS05650 PF17209 Hfq protein ND05_RS05655 PF13167 GTP-binding GTPase N-terminal ND05_RS05655 PF16360 GTP-binding GTPase Middle Region ND05_RS05655 PF01926 50S ribosome-binding GTPase ND05_RS05660 PF12221 Bacterial membrane protein N terminal ND05_RS05660 PF01145 SPFH domain / Band 7 family ND05_RS05665 PF01145 SPFH domain / Band 7 family ND05_RS05670 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ND05_RS05675 PF00709 Adenylosuccinate synthetase ND05_RS05680 PF02082 Transcriptional regulator ND05_RS05685 PF08461 Ribonuclease R winged-helix domain ND05_RS05685 PF00773 RNB domain ND05_RS05685 PF17876 Cold shock domain ND05_RS05685 PF00575 S1 RNA binding domain ND05_RS05685 PF08206 Ribonuclease B OB domain ND05_RS05690 PF08032 RNA 2'-O ribose methyltransferase substrate binding ND05_RS05690 PF00588 SpoU rRNA Methylase family ND05_RS05700 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) ND05_RS05705 PF04012 PspA/IM30 family ND05_RS05710 PF10679 Protein of unknown function (DUF2491) ND05_RS05715 PF03994 Domain of Unknown Function (DUF350) ND05_RS05720 PF06693 Protein of unknown function (DUF1190) ND05_RS05725 PF03738 Glutathionylspermidine synthase preATP-grasp ND05_RS05730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ND05_RS05730 PF02770 Acyl-CoA dehydrogenase, middle domain ND05_RS05730 PF18158 Adaptive response protein AidB N-terminal domain ND05_RS05735 PF07338 Protein of unknown function (DUF1471) ND05_RS05740 PF07338 Protein of unknown function (DUF1471) ND05_RS05745 PF00326 Prolyl oligopeptidase family ND05_RS05750 PF08220 DeoR-like helix-turn-helix domain ND05_RS05750 PF00455 DeoR C terminal sensor domain ND05_RS05760 PF03611 PTS system sugar-specific permease component ND05_RS05765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND05_RS05775 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ND05_RS05780 PF01261 Xylose isomerase-like TIM barrel ND05_RS05785 PF00596 Class II Aldolase and Adducin N-terminal domain ND05_RS05790 PF07338 Protein of unknown function (DUF1471) ND05_RS05795 PF01250 Ribosomal protein S6 ND05_RS05800 PF00436 Single-strand binding protein family ND05_RS05805 PF01084 Ribosomal protein S18 ND05_RS05810 PF03948 Ribosomal protein L9, C-terminal domain ND05_RS05810 PF01281 Ribosomal protein L9, N-terminal domain ND05_RS05815 PF03480 Bacterial extracellular solute-binding protein, family 7 ND05_RS05820 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ND05_RS05825 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ND05_RS05830 PF00890 FAD binding domain ND05_RS05830 PF02910 Fumarate reductase flavoprotein C-term ND05_RS05835 PF01144 Coenzyme A transferase ND05_RS05840 PF00378 Enoyl-CoA hydratase/isomerase ND05_RS05855 PF17938 Tetracyclin repressor-like, C-terminal domain ND05_RS05860 PF04225 Opacity-associated protein A LysM-like domain ND05_RS05860 PF08525 Opacity-associated protein A N-terminal motif ND05_RS05870 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND05_RS05870 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ND05_RS05875 PF00324 Amino acid permease ND05_RS05880 PF01814 Hemerythrin HHE cation binding domain ND05_RS05880 PF04405 Domain of Unknown function (DUF542) ND05_RS05885 PF00892 EamA-like transporter family ND05_RS05890 PF05368 NmrA-like family ND05_RS05895 PF01638 HxlR-like helix-turn-helix ND05_RS05900 PF02872 5'-nucleotidase, C-terminal domain ND05_RS05900 PF00149 Calcineurin-like phosphoesterase ND05_RS05905 PF00459 Inositol monophosphatase family ND05_RS05910 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ND05_RS05915 PF06526 Protein of unknown function (DUF1107) ND05_RS05920 PF03471 Transporter associated domain ND05_RS05920 PF01595 Cyclin M transmembrane N-terminal domain ND05_RS05920 PF00571 CBS domain ND05_RS05925 PF01625 Peptide methionine sulfoxide reductase ND05_RS05935 PF07244 Surface antigen variable number repeat ND05_RS05935 PF01103 Surface antigen ND05_RS05935 PF17243 POTRA domain TamA domain 1 ND05_RS05940 PF04357 TamB, inner membrane protein subunit of TAM complex ND05_RS05945 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like ND05_RS05950 PF00719 Inorganic pyrophosphatase ND05_RS05955 PF13407 Periplasmic binding protein domain ND05_RS05960 PF00005 ABC transporter ND05_RS05965 PF02653 Branched-chain amino acid transport system / permease component ND05_RS05975 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ND05_RS05980 PF08245 Mur ligase middle domain ND05_RS05980 PF01225 Mur ligase family, catalytic domain ND05_RS05980 PF02875 Mur ligase family, glutamate ligase domain ND05_RS05985 PF04751 Protein of unknown function (DUF615) ND05_RS05990 PF01523 Putative modulator of DNA gyrase ND05_RS05995 PF07361 Cytochrome b562 ND05_RS06005 PF03477 ATP cone domain ND05_RS06005 PF13597 Anaerobic ribonucleoside-triphosphate reductase ND05_RS06010 PF11941 Domain of unknown function (DUF3459) ND05_RS06010 PF00128 Alpha amylase, catalytic domain ND05_RS06015 PF00367 phosphotransferase system, EIIB ND05_RS06015 PF02378 Phosphotransferase system, EIIC ND05_RS06020 PF00356 Bacterial regulatory proteins, lacI family ND05_RS06025 PF17059 MgtA leader peptide ND05_RS06030 PF00690 Cation transporter/ATPase, N-terminus ND05_RS06030 PF00689 Cation transporting ATPase, C-terminus ND05_RS06035 PF01042 Endoribonuclease L-PSP ND05_RS06040 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ND05_RS06040 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ND05_RS06045 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ND05_RS06045 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ND05_RS06050 PF08052 PyrBI operon leader peptide ND05_RS06060 PF01042 Endoribonuclease L-PSP ND05_RS06070 PF00440 Bacterial regulatory proteins, tetR family ND05_RS06075 PF04074 YhcH/YjgK/YiaL ND05_RS06085 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ND05_RS06085 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ND05_RS06090 PF06877 Regulator of ribonuclease activity B ND05_RS06095 PF00583 Acetyltransferase (GNAT) family ND05_RS06105 PF00133 tRNA synthetases class I (I, L, M and V) ND05_RS06105 PF10458 Valyl tRNA synthetase tRNA binding arm ND05_RS06105 PF08264 Anticodon-binding domain of tRNA ND05_RS06110 PF04364 DNA polymerase III chi subunit, HolC ND05_RS06115 PF02789 Cytosol aminopeptidase family, N-terminal domain ND05_RS06115 PF00883 Cytosol aminopeptidase family, catalytic domain ND05_RS06120 PF03739 Lipopolysaccharide export system permease LptF/LptG ND05_RS06125 PF03739 Lipopolysaccharide export system permease LptF/LptG ND05_RS06130 PF05872 Bacterial protein of unknown function (DUF853) ND05_RS06135 PF00356 Bacterial regulatory proteins, lacI family ND05_RS06140 PF02447 GntP family permease ND05_RS06145 PF00106 short chain dehydrogenase ND05_RS06150 PF00107 Zinc-binding dehydrogenase ND05_RS06150 PF08240 Alcohol dehydrogenase GroES-like domain ND05_RS06155 PF01202 Shikimate kinase ND05_RS06160 PF08240 Alcohol dehydrogenase GroES-like domain ND05_RS06160 PF00107 Zinc-binding dehydrogenase ND05_RS06175 PF00069 Protein kinase domain ND05_RS06175 PF03793 PASTA domain ND05_RS06230 PF07728 AAA domain (dynein-related subfamily) ND05_RS06230 PF12102 Domain of unknown function (DUF3578) ND05_RS06245 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ND05_RS06255 PF06178 Oligogalacturonate-specific porin protein (KdgM) ND05_RS06265 PF00589 Phage integrase family ND05_RS06270 PF00589 Phage integrase family ND05_RS06275 PF00419 Fimbrial protein ND05_RS06280 PF00419 Fimbrial protein ND05_RS06285 PF02753 Pili assembly chaperone PapD, C-terminal domain ND05_RS06285 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND05_RS06290 PF13954 PapC N-terminal domain ND05_RS06290 PF13953 PapC C-terminal domain ND05_RS06290 PF00577 Outer membrane usher protein ND05_RS06295 PF00419 Fimbrial protein ND05_RS06305 PF09160 FimH, mannose binding ND05_RS06305 PF00419 Fimbrial protein ND05_RS06320 PF03786 D-mannonate dehydratase (UxuA) ND05_RS06325 PF01232 Mannitol dehydrogenase Rossmann domain ND05_RS06325 PF08125 Mannitol dehydrogenase C-terminal domain ND05_RS06335 PF00392 Bacterial regulatory proteins, gntR family ND05_RS06335 PF07729 FCD domain ND05_RS06340 PF10887 Protein of unknown function (DUF2686) ND05_RS06350 PF04965 Gene 25-like lysozyme ND05_RS06355 PF03466 LysR substrate binding domain ND05_RS06355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS06360 PF01979 Amidohydrolase family ND05_RS06365 PF07670 Nucleoside recognition ND05_RS06370 PF07670 Nucleoside recognition ND05_RS06380 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family ND05_RS06385 PF06779 Uncharacterised MFS-type transporter YbfB ND05_RS06390 PF06977 SdiA-regulated ND05_RS06395 PF11823 Protein of unknown function (DUF3343) ND05_RS06400 PF01869 BadF/BadG/BcrA/BcrD ATPase family ND05_RS06405 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component ND05_RS06410 PF04286 Protein of unknown function (DUF445) ND05_RS06415 PF07690 Major Facilitator Superfamily ND05_RS06420 PF04754 Putative transposase, YhgA-like ND05_RS06425 PF00392 Bacterial regulatory proteins, gntR family ND05_RS06425 PF00155 Aminotransferase class I and II ND05_RS06430 PF06568 Domain of unknown function (DUF1127) ND05_RS06435 PF01804 Penicillin amidase ND05_RS06440 PF02492 CobW/HypB/UreG, nucleotide-binding domain ND05_RS06440 PF07683 Cobalamin synthesis protein cobW C-terminal domain ND05_RS06445 PF04328 Selenoprotein, putative ND05_RS06450 PF13722 5TM C-terminal transporter carbon starvation CstA ND05_RS06450 PF02554 Carbon starvation protein CstA ND05_RS06460 PF01613 Flavin reductase like domain ND05_RS06465 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ND05_RS06465 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ND05_RS06475 PF07690 Major Facilitator Superfamily ND05_RS06480 PF03328 HpcH/HpaI aldolase/citrate lyase family ND05_RS06485 PF01557 Fumarylacetoacetate (FAA) hydrolase family ND05_RS06490 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase ND05_RS06495 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ND05_RS06500 PF00171 Aldehyde dehydrogenase family ND05_RS06505 PF01557 Fumarylacetoacetate (FAA) hydrolase family ND05_RS06510 PF01047 MarR family ND05_RS06515 PF02203 Tar ligand binding domain homologue ND05_RS06515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND05_RS06515 PF00672 HAMP domain ND05_RS06520 PF07690 Major Facilitator Superfamily ND05_RS06525 PF00392 Bacterial regulatory proteins, gntR family ND05_RS06525 PF07729 FCD domain ND05_RS06530 PF08240 Alcohol dehydrogenase GroES-like domain ND05_RS06530 PF00107 Zinc-binding dehydrogenase ND05_RS06535 PF00884 Sulfatase ND05_RS06540 PF10696 Protein of unknown function (DUF2501) ND05_RS06545 PF01695 IstB-like ATP binding protein ND05_RS06550 PF17948 DnaT DNA-binding domain ND05_RS06555 PF12821 Threonine/Serine exporter, ThrE ND05_RS06560 PF06738 Putative threonine/serine exporter ND05_RS06565 PF00196 Bacterial regulatory proteins, luxR family ND05_RS06570 PF00196 Bacterial regulatory proteins, luxR family ND05_RS06575 PF06276 Ferric iron reductase FhuF-like transporter ND05_RS06575 PF11575 FhuF 2Fe-2S C-terminal domain ND05_RS06580 PF07256 Protein of unknown function (DUF1435) ND05_RS06600 PF08468 Methyltransferase small domain N-terminal ND05_RS06600 PF05175 Methyltransferase small domain ND05_RS06605 PF03603 DNA polymerase III psi subunit ND05_RS06610 PF00583 Acetyltransferase (GNAT) family ND05_RS06615 PF13419 Haloacid dehalogenase-like hydrolase ND05_RS06685 PF09669 Phage regulatory protein Rha (Phage_pRha) ND05_RS06685 PF10549 ORF11CD3 domain ND05_RS06700 PF06069 PerC transcriptional activator ND05_RS06705 PF05869 DNA N-6-adenine-methyltransferase (Dam) ND05_RS06710 PF00717 Peptidase S24-like ND05_RS06710 PF01726 LexA DNA binding domain ND05_RS06715 PF05866 Endodeoxyribonuclease RusA ND05_RS06730 PF06147 Protein of unknown function (DUF968) ND05_RS06755 PF01555 DNA methylase ND05_RS06780 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ND05_RS06795 PF04971 Bacteriophage P21 holin S ND05_RS06800 PF00959 Phage lysozyme ND05_RS06805 PF03245 Bacteriophage Rz lysis protein ND05_RS06815 PF06069 PerC transcriptional activator ND05_RS06820 PF13132 Domain of unknown function (DUF3950) ND05_RS06850 PF06316 Enterobacterial Ail/Lom protein ND05_RS06855 PF08400 Prophage tail fibre N-terminal ND05_RS06855 PF03335 Phage tail fibre repeat ND05_RS06855 PF07484 Phage Tail Collar Domain ND05_RS06890 PF06183 DinI-like family ND05_RS06895 PF00009 Elongation factor Tu GTP binding domain ND05_RS06895 PF03144 Elongation factor Tu domain 2 ND05_RS06895 PF16658 Class II release factor RF3, C-terminal domain ND05_RS06900 PF04972 BON domain ND05_RS06905 PF07043 Protein of unknown function (DUF1328) ND05_RS06910 PF01734 Patatin-like phospholipase ND05_RS06915 PF01026 TatD related DNase ND05_RS06920 PF04055 Radical SAM superfamily ND05_RS06925 PF11230 Protein of unknown function (DUF3029) ND05_RS06930 PF01791 DeoC/LacD family aldolase ND05_RS06935 PF02885 Glycosyl transferase family, helical bundle domain ND05_RS06935 PF00591 Glycosyl transferase family, a/b domain ND05_RS06935 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ND05_RS06940 PF01676 Metalloenzyme superfamily ND05_RS06945 PF01048 Phosphorylase superfamily ND05_RS06950 PF10437 Bacterial lipoate protein ligase C-terminus ND05_RS06950 PF03099 Biotin/lipoate A/B protein ligase family ND05_RS06955 PF10144 Bacterial virulence factor haemolysin ND05_RS06960 PF18429 Domain of unknown function (DUF5609) ND05_RS06965 PF18073 Rubredoxin metal binding domain ND05_RS06970 PF13521 AAA domain ND05_RS06970 PF01381 Helix-turn-helix ND05_RS06975 PF12848 ABC transporter ND05_RS06975 PF00005 ABC transporter ND05_RS06985 PF01464 Transglycosylase SLT domain ND05_RS06985 PF14718 Soluble lytic murein transglycosylase L domain ND05_RS06990 PF01371 Trp repressor protein ND05_RS06995 PF01931 Protein of unknown function DUF84 ND05_RS07000 PF00300 Histidine phosphatase superfamily (branch 1) ND05_RS07005 PF06445 GyrI-like small molecule binding domain ND05_RS07005 PF12833 Helix-turn-helix domain ND05_RS07015 PF00486 Transcriptional regulatory protein, C terminal ND05_RS07015 PF00072 Response regulator receiver domain ND05_RS07020 PF00672 HAMP domain ND05_RS07020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS07020 PF00512 His Kinase A (phospho-acceptor) domain ND05_RS07025 PF06123 Inner membrane protein CreD ND05_RS07030 PF00072 Response regulator receiver domain ND05_RS07030 PF00486 Transcriptional regulatory protein, C terminal ND05_RS07045 PF00588 SpoU rRNA Methylase family ND05_RS07055 PF00696 Amino acid kinase family ND05_RS07055 PF13840 ACT domain ND05_RS07055 PF03447 Homoserine dehydrogenase, NAD binding domain ND05_RS07055 PF01842 ACT domain ND05_RS07055 PF00742 Homoserine dehydrogenase ND05_RS07060 PF08544 GHMP kinases C terminal ND05_RS07060 PF00288 GHMP kinases N terminal domain ND05_RS07065 PF14821 Threonine synthase N terminus ND05_RS07065 PF00291 Pyridoxal-phosphate dependent enzyme ND05_RS07070 PF10697 Protein of unknown function (DUF2502) ND05_RS07075 PF03883 Peroxide stress protein YaaA ND05_RS07080 PF01235 Sodium:alanine symporter family ND05_RS07085 PF00923 Transaldolase/Fructose-6-phosphate aldolase ND05_RS07090 PF00994 Probable molybdopterin binding domain ND05_RS07095 PF01184 GPR1/FUN34/yaaH family ND05_RS07100 PF13099 Domain of unknown function (DUF3944) ND05_RS07100 PF03981 Ubiquinol-cytochrome C chaperone ND05_RS07105 PF10807 Protein of unknown function (DUF2541) ND05_RS07110 PF00012 Hsp70 protein ND05_RS07115 PF00684 DnaJ central domain ND05_RS07115 PF00226 DnaJ domain ND05_RS07115 PF01556 DnaJ C terminal domain ND05_RS07120 PF01848 Hok/gef family ND05_RS07130 PF00884 Sulfatase ND05_RS07130 PF16385 Domain of unknown function ND05_RS07140 PF06965 Na+/H+ antiporter 1 ND05_RS07145 PF03466 LysR substrate binding domain ND05_RS07145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS07170 PF01649 Ribosomal protein S20 ND05_RS07175 PF10837 Protein of unknown function (DUF2575) ND05_RS07180 PF06574 FAD synthetase ND05_RS07180 PF01687 Riboflavin kinase ND05_RS07185 PF00133 tRNA synthetases class I (I, L, M and V) ND05_RS07185 PF08264 Anticodon-binding domain of tRNA ND05_RS07185 PF06827 Zinc finger found in FPG and IleRS ND05_RS07190 PF01252 Signal peptidase (SPase) II ND05_RS07195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND05_RS07200 PF02401 LytB protein ND05_RS07205 PF01156 Inosine-uridine preferring nucleoside hydrolase ND05_RS07210 PF05173 Dihydrodipicolinate reductase, C-terminus ND05_RS07210 PF01113 Dihydrodipicolinate reductase, N-terminus ND05_RS07220 PF00117 Glutamine amidotransferase class-I ND05_RS07220 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ND05_RS07225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ND05_RS07225 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ND05_RS07225 PF02142 MGS-like domain ND05_RS07235 PF07180 CaiF/GrlA transcriptional regulator ND05_RS07240 PF00132 Bacterial transferase hexapeptide (six repeats) ND05_RS07245 PF00378 Enoyl-CoA hydratase/isomerase ND05_RS07250 PF00501 AMP-binding enzyme ND05_RS07250 PF13193 AMP-binding enzyme C-terminal domain ND05_RS07255 PF02515 CoA-transferase family III ND05_RS07260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ND05_RS07260 PF02770 Acyl-CoA dehydrogenase, middle domain ND05_RS07260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ND05_RS07265 PF02028 BCCT, betaine/carnitine/choline family transporter ND05_RS07270 PF01012 Electron transfer flavoprotein domain ND05_RS07275 PF01012 Electron transfer flavoprotein domain ND05_RS07275 PF00766 Electron transfer flavoprotein FAD-binding domain ND05_RS07280 PF01494 FAD binding domain ND05_RS07290 PF00083 Sugar (and other) transporter ND05_RS07295 PF02525 Flavodoxin-like fold ND05_RS07300 PF00999 Sodium/hydrogen exchanger family ND05_RS07300 PF02254 TrkA-N domain ND05_RS07305 PF00186 Dihydrofolate reductase ND05_RS07310 PF00149 Calcineurin-like phosphoesterase ND05_RS07315 PF04379 ApaG domain ND05_RS07320 PF00398 Ribosomal RNA adenine dimethylase ND05_RS07325 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ND05_RS07330 PF00639 PPIC-type PPIASE domain ND05_RS07330 PF09312 SurA N-terminal domain ND05_RS07335 PF04453 LPS transport system D ND05_RS07335 PF03968 OstA-like protein ND05_RS07340 PF00226 DnaJ domain ND05_RS07340 PF05099 Tellurite resistance protein TerB ND05_RS07345 PF00849 RNA pseudouridylate synthase ND05_RS07350 PF00271 Helicase conserved C-terminal domain ND05_RS07350 PF12137 RNA polymerase recycling family C-terminal ND05_RS07350 PF00176 SNF2 family N-terminal domain ND05_RS07350 PF18339 RapA N-terminal Tudor like domain 1 ND05_RS07350 PF18337 RapA N-terminal Tudor like domain ND05_RS07355 PF00136 DNA polymerase family B ND05_RS07355 PF03104 DNA polymerase family B, exonuclease domain ND05_RS07360 PF00596 Class II Aldolase and Adducin N-terminal domain ND05_RS07365 PF11762 L-arabinose isomerase C-terminal domain ND05_RS07365 PF02610 L-arabinose isomerase ND05_RS07370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ND05_RS07380 PF12833 Helix-turn-helix domain ND05_RS07380 PF02311 AraC-like ligand binding domain ND05_RS07385 PF09335 SNARE associated Golgi protein ND05_RS07390 PF00005 ABC transporter ND05_RS07395 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS07405 PF12793 Sugar transport-related sRNA regulator N-term ND05_RS07405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND05_RS07415 PF07690 Major Facilitator Superfamily ND05_RS07420 PF00694 Aconitase C-terminal domain ND05_RS07425 PF00330 Aconitase family (aconitate hydratase) ND05_RS07430 PF00180 Isocitrate/isopropylmalate dehydrogenase ND05_RS07435 PF08502 LeuA allosteric (dimerisation) domain ND05_RS07435 PF00682 HMGL-like ND05_RS07440 PF08054 Leucine operon leader peptide ND05_RS07445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS07445 PF03466 LysR substrate binding domain ND05_RS07455 PF10369 Small subunit of acetolactate synthase ND05_RS07465 PF00356 Bacterial regulatory proteins, lacI family ND05_RS07465 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND05_RS07480 PF02381 MraZ protein, putative antitoxin-like ND05_RS07485 PF01795 MraW methylase family ND05_RS07490 PF04999 Cell division protein FtsL ND05_RS07495 PF03717 Penicillin-binding Protein dimerisation domain ND05_RS07495 PF00905 Penicillin binding protein transpeptidase domain ND05_RS07500 PF01225 Mur ligase family, catalytic domain ND05_RS07500 PF08245 Mur ligase middle domain ND05_RS07500 PF02875 Mur ligase family, glutamate ligase domain ND05_RS07505 PF02875 Mur ligase family, glutamate ligase domain ND05_RS07505 PF01225 Mur ligase family, catalytic domain ND05_RS07505 PF08245 Mur ligase middle domain ND05_RS07510 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ND05_RS07510 PF00953 Glycosyl transferase family 4 ND05_RS07515 PF02875 Mur ligase family, glutamate ligase domain ND05_RS07515 PF08245 Mur ligase middle domain ND05_RS07520 PF01098 Cell cycle protein ND05_RS07525 PF04101 Glycosyltransferase family 28 C-terminal domain ND05_RS07525 PF03033 Glycosyltransferase family 28 N-terminal domain ND05_RS07530 PF01225 Mur ligase family, catalytic domain ND05_RS07530 PF02875 Mur ligase family, glutamate ligase domain ND05_RS07530 PF08245 Mur ligase middle domain ND05_RS07535 PF07478 D-ala D-ala ligase C-terminus ND05_RS07535 PF01820 D-ala D-ala ligase N-terminus ND05_RS07540 PF03799 Cell division protein FtsQ ND05_RS07540 PF08478 POTRA domain, FtsQ-type ND05_RS07545 PF02491 SHS2 domain inserted in FTSA ND05_RS07550 PF00091 Tubulin/FtsZ family, GTPase domain ND05_RS07550 PF12327 FtsZ family, C-terminal domain ND05_RS07555 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ND05_RS07560 PF06558 Secretion monitor precursor protein (SecM) ND05_RS07565 PF07517 SecA DEAD-like domain ND05_RS07565 PF01043 SecA preprotein cross-linking domain ND05_RS07565 PF07516 SecA Wing and Scaffold domain ND05_RS07565 PF02810 SEC-C motif ND05_RS07570 PF00293 NUDIX domain ND05_RS07575 PF03884 DNA gyrase inhibitor YacG ND05_RS07580 PF07072 Cell division protein ND05_RS07585 PF01121 Dephospho-CoA kinase ND05_RS07590 PF00478 IMP dehydrogenase / GMP reductase domain ND05_RS07595 PF00482 Type II secretion system (T2SS), protein F ND05_RS07600 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ND05_RS07600 PF00437 Type II/IV secretion system protein ND05_RS07605 PF07963 Prokaryotic N-terminal methylation motif ND05_RS07615 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ND05_RS07615 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ND05_RS07620 PF01510 N-acetylmuramoyl-L-alanine amidase ND05_RS07625 PF17113 Regulatory signalling modulator protein AmpE ND05_RS07630 PF00324 Amino acid permease ND05_RS07635 PF07729 FCD domain ND05_RS07635 PF00392 Bacterial regulatory proteins, gntR family ND05_RS07645 PF17831 Pyruvate dehydrogenase E1 component middle domain ND05_RS07645 PF00456 Transketolase, thiamine diphosphate binding domain ND05_RS07650 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ND05_RS07650 PF00364 Biotin-requiring enzyme ND05_RS07650 PF02817 e3 binding domain ND05_RS07655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND05_RS07655 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND05_RS07660 PF11737 Protein of unknown function (DUF3300) ND05_RS07670 PF11791 Aconitate B N-terminal domain ND05_RS07670 PF06434 Aconitate hydratase 2 N-terminus ND05_RS07670 PF00330 Aconitase family (aconitate hydratase) ND05_RS07675 PF06062 Uncharacterised protein family (UPF0231) ND05_RS07680 PF02675 S-adenosylmethionine decarboxylase ND05_RS07685 PF17284 Spermidine synthase tetramerisation domain ND05_RS07690 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ND05_RS07695 PF07732 Multicopper oxidase ND05_RS07695 PF07731 Multicopper oxidase ND05_RS07695 PF00394 Multicopper oxidase ND05_RS07700 PF01011 PQQ enzyme repeat ND05_RS07705 PF00156 Phosphoribosyl transferase domain ND05_RS07710 PF00484 Carbonic anhydrase ND05_RS07715 PF00005 ABC transporter ND05_RS07720 PF01061 ABC-2 type transporter ND05_RS07725 PF03610 PTS system fructose IIA component ND05_RS07730 PF01522 Polysaccharide deacetylase ND05_RS07735 PF02261 Aspartate decarboxylase ND05_RS07745 PF04754 Putative transposase, YhgA-like ND05_RS07750 PF02569 Pantoate-beta-alanine ligase ND05_RS07755 PF02548 Ketopantoate hydroxymethyltransferase ND05_RS07780 PF00419 Fimbrial protein ND05_RS07785 PF00419 Fimbrial protein ND05_RS07790 PF00419 Fimbrial protein ND05_RS07795 PF00577 Outer membrane usher protein ND05_RS07795 PF13954 PapC N-terminal domain ND05_RS07795 PF13953 PapC C-terminal domain ND05_RS07800 PF02753 Pili assembly chaperone PapD, C-terminal domain ND05_RS07800 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND05_RS07805 PF00419 Fimbrial protein ND05_RS07810 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ND05_RS07815 PF12626 Polymerase A arginine-rich C-terminus ND05_RS07815 PF01743 Poly A polymerase head domain ND05_RS07815 PF12627 Probable RNA and SrmB- binding site of polymerase A ND05_RS07820 PF00749 tRNA synthetases class I (E and Q), catalytic domain ND05_RS07825 PF01258 Prokaryotic dksA/traR C4-type zinc finger ND05_RS07830 PF03749 Sugar fermentation stimulation protein RE domain ND05_RS07830 PF17746 SfsA N-terminal OB domain ND05_RS07835 PF02834 LigT like Phosphoesterase ND05_RS07840 PF04408 Helicase associated domain (HA2) ND05_RS07840 PF00270 DEAD/DEAH box helicase ND05_RS07840 PF00271 Helicase conserved C-terminal domain ND05_RS07840 PF08482 ATP-dependent helicase C-terminal ND05_RS07850 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal ND05_RS07850 PF00912 Transglycosylase ND05_RS07850 PF14814 Bifunctional transglycosylase second domain ND05_RS07850 PF00905 Penicillin binding protein transpeptidase domain ND05_RS07860 PF00005 ABC transporter ND05_RS07865 PF01497 Periplasmic binding protein ND05_RS07870 PF01032 FecCD transport family ND05_RS07875 PF00202 Aminotransferase class-III ND05_RS07880 PF00654 Voltage gated chloride channel ND05_RS07885 PF01521 Iron-sulphur cluster biosynthesis ND05_RS07890 PF03458 UPF0126 domain ND05_RS07895 PF01497 Periplasmic binding protein ND05_RS07900 PF01048 Phosphorylase superfamily ND05_RS07905 PF01966 HD domain ND05_RS07905 PF13286 Phosphohydrolase-associated domain ND05_RS07915 PF00595 PDZ domain ND05_RS07920 PF17853 GGDEF-like domain ND05_RS07920 PF05651 Putative sugar diacid recognition ND05_RS07920 PF13556 PucR C-terminal helix-turn-helix domain ND05_RS07925 PF11944 Protein of unknown function (DUF3461) ND05_RS07930 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ND05_RS07930 PF14602 Hexapeptide repeat of succinyl-transferase ND05_RS07930 PF00132 Bacterial transferase hexapeptide (six repeats) ND05_RS07935 PF01966 HD domain ND05_RS07935 PF01842 ACT domain ND05_RS07935 PF01909 Nucleotidyltransferase domain ND05_RS07935 PF08335 GlnD PII-uridylyltransferase ND05_RS07940 PF00557 Metallopeptidase family M24 ND05_RS07950 PF00318 Ribosomal protein S2 ND05_RS07960 PF00889 Elongation factor TS ND05_RS07965 PF00696 Amino acid kinase family ND05_RS07970 PF01765 Ribosome recycling factor ND05_RS07975 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ND05_RS07975 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ND05_RS07975 PF13288 DXP reductoisomerase C-terminal domain ND05_RS07980 PF01255 Putative undecaprenyl diphosphate synthase ND05_RS07990 PF17820 PDZ domain ND05_RS07990 PF02163 Peptidase family M50 ND05_RS07995 PF07244 Surface antigen variable number repeat ND05_RS07995 PF01103 Surface antigen ND05_RS08000 PF03938 Outer membrane protein (OmpH-like) ND05_RS08005 PF00132 Bacterial transferase hexapeptide (six repeats) ND05_RS08005 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ND05_RS08010 PF07977 FabA-like domain ND05_RS08015 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ND05_RS08015 PF00132 Bacterial transferase hexapeptide (six repeats) ND05_RS08020 PF02684 Lipid-A-disaccharide synthetase ND05_RS08025 PF01351 Ribonuclease HII ND05_RS08030 PF02811 PHP domain ND05_RS08030 PF01336 OB-fold nucleic acid binding domain ND05_RS08030 PF07733 Bacterial DNA polymerase III alpha NTPase domain ND05_RS08030 PF14579 Helix-hairpin-helix motif ND05_RS08030 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ND05_RS08035 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ND05_RS08040 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ND05_RS08040 PF01276 Orn/Lys/Arg decarboxylase, major domain ND05_RS08040 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ND05_RS08045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ND05_RS08050 PF11734 TilS substrate C-terminal domain ND05_RS08050 PF09179 TilS substrate binding domain ND05_RS08050 PF01171 PP-loop family ND05_RS08055 PF07073 Modulator of Rho-dependent transcription termination (ROF) ND05_RS08060 PF06786 Uncharacterised protein family (UPF0253) ND05_RS08065 PF07152 YaeQ protein ND05_RS08070 PF00472 RF-1 domain ND05_RS08075 PF17185 NlpE C-terminal OB domain ND05_RS08075 PF04170 NlpE N-terminal domain ND05_RS08085 PF03129 Anticodon binding domain ND05_RS08085 PF04073 Aminoacyl-tRNA editing domain ND05_RS08085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ND05_RS08090 PF18389 TrmO C-terminal domain ND05_RS08090 PF01980 tRNA-methyltransferase O ND05_RS08095 PF16358 RcsF lipoprotein ND05_RS08100 PF03180 NLPA lipoprotein ND05_RS08105 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS08110 PF00005 ABC transporter ND05_RS08110 PF09383 NIL domain ND05_RS08150 PF00248 Aldo/keto reductase family ND05_RS08155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS08155 PF03466 LysR substrate binding domain ND05_RS08160 PF03372 Endonuclease/Exonuclease/phosphatase family ND05_RS08165 PF08241 Methyltransferase domain ND05_RS08170 PF01464 Transglycosylase SLT domain ND05_RS08170 PF01476 LysM domain ND05_RS08175 PF16123 Hydroxyacylglutathione hydrolase C-terminus ND05_RS08175 PF00753 Metallo-beta-lactamase superfamily ND05_RS08180 PF08241 Methyltransferase domain ND05_RS08185 PF00075 RNase H ND05_RS08190 PF00929 Exonuclease ND05_RS08220 PF05638 Type VI secretion system effector, Hcp ND05_RS08230 PF14331 ImcF-related N-terminal domain ND05_RS08230 PF06744 Type VI secretion protein IcmF C-terminal ND05_RS08230 PF06761 Intracellular multiplication and human macrophage-killing ND05_RS08245 PF10431 C-terminal, D2-small domain, of ClpB protein ND05_RS08245 PF17871 AAA lid domain ND05_RS08245 PF00004 ATPase family associated with various cellular activities (AAA) ND05_RS08245 PF07724 AAA domain (Cdc48 subfamily) ND05_RS08275 PF05947 Type VI secretion system, TssF ND05_RS08285 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ND05_RS08300 PF05638 Type VI secretion system effector, Hcp ND05_RS08310 PF04717 Type VI secretion system, phage-baseplate injector ND05_RS08315 PF05593 RHS Repeat ND05_RS08315 PF03527 RHS protein ND05_RS08315 PF14220 Domain of unknown function (DUF4329) ND05_RS08335 PF00795 Carbon-nitrogen hydrolase ND05_RS08345 PF02770 Acyl-CoA dehydrogenase, middle domain ND05_RS08345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ND05_RS08345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ND05_RS08345 PF09317 Domain of unknown function (DUF1974) ND05_RS08350 PF13580 SIS domain ND05_RS08355 PF13230 Glutamine amidotransferases class-II ND05_RS08360 PF03734 L,D-transpeptidase catalytic domain ND05_RS08365 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ ND05_RS08370 PF04221 RelB antitoxin ND05_RS08375 PF00877 NlpC/P60 family ND05_RS08390 PF00771 FHIPEP family ND05_RS08395 PF00691 OmpA family ND05_RS08395 PF13677 Membrane MotB of proton-channel complex MotA/MotB ND05_RS08400 PF11798 IMS family HHH motif ND05_RS08400 PF11799 impB/mucB/samB family C-terminal domain ND05_RS08400 PF00817 impB/mucB/samB family ND05_RS08405 PF13673 Acetyltransferase (GNAT) domain ND05_RS08420 PF00472 RF-1 domain ND05_RS08425 PF01546 Peptidase family M20/M25/M40 ND05_RS08425 PF07687 Peptidase dimerisation domain ND05_RS08430 PF00156 Phosphoribosyl transferase domain ND05_RS08435 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) ND05_RS08440 PF07417 Sigma factor-binding transcriptional regulator Crl ND05_RS08445 PF00267 Gram-negative porin ND05_RS08450 PF01472 PUA domain ND05_RS08450 PF00696 Amino acid kinase family ND05_RS08455 PF00171 Aldehyde dehydrogenase family ND05_RS08465 PF03466 LysR substrate binding domain ND05_RS08470 PF02625 XdhC and CoxI family ND05_RS08470 PF13478 XdhC Rossmann domain ND05_RS08475 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ND05_RS08475 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ND05_RS08480 PF00941 FAD binding domain in molybdopterin dehydrogenase ND05_RS08480 PF03450 CO dehydrogenase flavoprotein C-terminal domain ND05_RS08485 PF00111 2Fe-2S iron-sulfur cluster binding domain ND05_RS08485 PF01799 [2Fe-2S] binding domain ND05_RS08500 PF03692 Putative zinc- or iron-chelating domain ND05_RS08515 PF16967 E-set like domain ND05_RS08515 PF15976 CS1-pili formation C-terminal ND05_RS08520 PF18649 EcpB C-terminal domain ND05_RS08525 PF16449 Fimbrillin MatB ND05_RS08530 PF00196 Bacterial regulatory proteins, luxR family ND05_RS08545 PF00444 Ribosomal protein L36 ND05_RS08550 PF01197 Ribosomal protein L31 ND05_RS08570 PF11924 Inverse autotransporter, beta-domain ND05_RS08575 PF12833 Helix-turn-helix domain ND05_RS08580 PF00248 Aldo/keto reductase family ND05_RS08585 PF04224 Protein of unknown function, DUF417 ND05_RS08590 PF07338 Protein of unknown function (DUF1471) ND05_RS08595 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND05_RS08595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ND05_RS08600 PF12852 Cupin ND05_RS08600 PF12833 Helix-turn-helix domain ND05_RS08605 PF02754 Cysteine-rich domain ND05_RS08610 PF13183 4Fe-4S dicluster domain ND05_RS08610 PF11870 Domain of unknown function (DUF3390) ND05_RS08610 PF02589 LUD domain ND05_RS08615 PF02589 LUD domain ND05_RS08635 PF00732 GMC oxidoreductase ND05_RS08635 PF05199 GMC oxidoreductase ND05_RS08640 PF00171 Aldehyde dehydrogenase family ND05_RS08645 PF13977 BetI-type transcriptional repressor, C-terminal ND05_RS08645 PF00440 Bacterial regulatory proteins, tetR family ND05_RS08655 PF02028 BCCT, betaine/carnitine/choline family transporter ND05_RS08660 PF03797 Autotransporter beta-domain ND05_RS08665 PF00563 EAL domain ND05_RS08665 PF00196 Bacterial regulatory proteins, luxR family ND05_RS08670 PF03466 LysR substrate binding domain ND05_RS08670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS08675 PF06496 Protein of unknown function (DUF1097) ND05_RS08685 PF12796 Ankyrin repeats (3 copies) ND05_RS08710 PF06545 Protein of unknown function (DUF1116) ND05_RS08715 PF00696 Amino acid kinase family ND05_RS08720 PF07969 Amidohydrolase family ND05_RS08730 PF13407 Periplasmic binding protein domain ND05_RS08735 PF00005 ABC transporter ND05_RS08740 PF02653 Branched-chain amino acid transport system / permease component ND05_RS08745 PF02653 Branched-chain amino acid transport system / permease component ND05_RS08750 PF00107 Zinc-binding dehydrogenase ND05_RS08750 PF08240 Alcohol dehydrogenase GroES-like domain ND05_RS08765 PF01810 LysE type translocator ND05_RS08770 PF07338 Protein of unknown function (DUF1471) ND05_RS08775 PF02954 Bacterial regulatory protein, Fis family ND05_RS08775 PF06506 Propionate catabolism activator ND05_RS08775 PF00158 Sigma-54 interaction domain ND05_RS08785 PF00285 Citrate synthase, C-terminal domain ND05_RS08790 PF03972 MmgE/PrpD family ND05_RS08795 PF00501 AMP-binding enzyme ND05_RS08795 PF13193 AMP-binding enzyme C-terminal domain ND05_RS08795 PF16177 Acetyl-coenzyme A synthetase N-terminus ND05_RS08800 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ND05_RS08805 PF07969 Amidohydrolase family ND05_RS08810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS08810 PF03466 LysR substrate binding domain ND05_RS08815 PF00484 Carbonic anhydrase ND05_RS08820 PF02560 Cyanate lyase C-terminal domain ND05_RS08825 PF07690 Major Facilitator Superfamily ND05_RS08830 PF00132 Bacterial transferase hexapeptide (six repeats) ND05_RS08830 PF12464 Maltose acetyltransferase ND05_RS08835 PF01306 LacY proton/sugar symporter ND05_RS08845 PF00703 Glycosyl hydrolases family 2 ND05_RS08845 PF02837 Glycosyl hydrolases family 2, sugar binding domain ND05_RS08845 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ND05_RS08845 PF02929 Beta galactosidase small chain ND05_RS08845 PF16353 Domain of unknown function(DUF4981) ND05_RS08855 PF00356 Bacterial regulatory proteins, lacI family ND05_RS08860 PF01614 Bacterial transcriptional regulator ND05_RS08860 PF09339 IclR helix-turn-helix domain ND05_RS08865 PF01494 FAD binding domain ND05_RS08870 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ND05_RS08875 PF12697 Alpha/beta hydrolase family ND05_RS08880 PF01557 Fumarylacetoacetate (FAA) hydrolase family ND05_RS08885 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation ND05_RS08885 PF01118 Semialdehyde dehydrogenase, NAD binding domain ND05_RS08890 PF00682 HMGL-like ND05_RS08890 PF07836 DmpG-like communication domain ND05_RS08895 PF07690 Major Facilitator Superfamily ND05_RS08900 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ND05_RS08905 PF00756 Putative esterase ND05_RS08910 PF00107 Zinc-binding dehydrogenase ND05_RS08910 PF08240 Alcohol dehydrogenase GroES-like domain ND05_RS08915 PF02583 Metal-sensitive transcriptional repressor ND05_RS08925 PF00132 Bacterial transferase hexapeptide (six repeats) ND05_RS08930 PF00535 Glycosyl transferase family 2 ND05_RS08935 PF02585 GlcNAc-PI de-N-acetylase ND05_RS08945 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ND05_RS08950 PF00005 ABC transporter ND05_RS08955 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS08960 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ND05_RS08965 PF00490 Delta-aminolevulinic acid dehydratase ND05_RS08975 PF03212 Pertactin ND05_RS08975 PF03797 Autotransporter beta-domain ND05_RS08980 PF15977 Winged helix-turn-helix DNA binding ND05_RS08985 PF00144 Beta-lactamase ND05_RS08995 PF05992 SbmA/BacA-like family ND05_RS09000 PF07759 Protein of unknown function (DUF1615) ND05_RS09005 PF10954 Protein of unknown function (DUF2755) ND05_RS09015 PF10953 Protein of unknown function (DUF2754) ND05_RS09020 PF07478 D-ala D-ala ligase C-terminus ND05_RS09020 PF01820 D-ala D-ala ligase N-terminus ND05_RS09030 PF10796 Sigma-S stabilisation anti-adaptor protein ND05_RS09035 PF00245 Alkaline phosphatase ND05_RS09040 PF07769 psiF repeat ND05_RS09045 PF00990 Diguanylate cyclase, GGDEF domain ND05_RS09045 PF05230 MASE2 domain ND05_RS09050 PF14748 Pyrroline-5-carboxylate reductase dimerisation ND05_RS09050 PF03807 NADP oxidoreductase coenzyme F420-dependent ND05_RS09055 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ND05_RS09060 PF01202 Shikimate kinase ND05_RS09065 PF16362 YaiA protein ND05_RS09075 PF07302 AroM protein ND05_RS09080 PF06865 Pyrimidine/purine nucleoside phosphorylase ND05_RS09090 PF10971 Protein of unknown function (DUF2773) ND05_RS09095 PF04381 Putative exonuclease, RdgC ND05_RS09105 PF07690 Major Facilitator Superfamily ND05_RS09110 PF13476 AAA domain ND05_RS09115 PF00149 Calcineurin-like phosphoesterase ND05_RS09115 PF12320 Type 5 capsule protein repressor C-terminal domain ND05_RS09120 PF00486 Transcriptional regulatory protein, C terminal ND05_RS09120 PF00072 Response regulator receiver domain ND05_RS09125 PF00989 PAS fold ND05_RS09125 PF11808 Phosphate regulon sensor protein PhoR ND05_RS09125 PF00512 His Kinase A (phospho-acceptor) domain ND05_RS09125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS09130 PF05525 Branched-chain amino acid transport protein ND05_RS09135 PF00324 Amino acid permease ND05_RS09140 PF02903 Alpha amylase, N-terminal ig-like domain ND05_RS09140 PF00128 Alpha amylase, catalytic domain ND05_RS09145 PF04336 Acyl carrier protein phosphodiesterase ND05_RS09150 PF02547 Queuosine biosynthesis protein ND05_RS09155 PF01702 Queuine tRNA-ribosyltransferase ND05_RS09160 PF02699 Preprotein translocase subunit ND05_RS09165 PF13721 SecD export protein N-terminal TM region ND05_RS09165 PF07549 SecD/SecF GG Motif ND05_RS09165 PF02355 Protein export membrane protein ND05_RS09170 PF02355 Protein export membrane protein ND05_RS09170 PF07549 SecD/SecF GG Motif ND05_RS09175 PF01844 HNH endonuclease ND05_RS09180 PF03502 Nucleoside-specific channel-forming protein, Tsx ND05_RS09185 PF11622 Protein of unknown function (DUF3251) ND05_RS09190 PF03477 ATP cone domain ND05_RS09195 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ND05_RS09195 PF01872 RibD C-terminal domain ND05_RS09200 PF00885 6,7-dimethyl-8-ribityllumazine synthase ND05_RS09205 PF01029 NusB family ND05_RS09210 PF00586 AIR synthase related protein, N-terminal domain ND05_RS09210 PF02769 AIR synthase related protein, C-terminal domain ND05_RS09215 PF04608 Phosphatidylglycerophosphatase A ND05_RS09220 PF00248 Aldo/keto reductase family ND05_RS09225 PF02780 Transketolase, C-terminal domain ND05_RS09225 PF02779 Transketolase, pyrimidine binding domain ND05_RS09225 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ND05_RS09230 PF00348 Polyprenyl synthetase ND05_RS09235 PF02609 Exonuclease VII small subunit ND05_RS09240 PF02568 Thiamine biosynthesis protein (ThiI) ND05_RS09240 PF02926 THUMP domain ND05_RS09245 PF01965 DJ-1/PfpI family ND05_RS09250 PF02558 Ketopantoate reductase PanE/ApbA ND05_RS09250 PF08546 Ketopantoate reductase PanE/ApbA C terminal ND05_RS09255 PF04461 Protein of unknown function (DUF520) ND05_RS09260 PF07690 Major Facilitator Superfamily ND05_RS09280 PF01040 UbiA prenyltransferase family ND05_RS09285 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ND05_RS09290 PF00510 Cytochrome c oxidase subunit III ND05_RS09295 PF00115 Cytochrome C and Quinol oxidase polypeptide I ND05_RS09300 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ND05_RS09300 PF06481 COX Aromatic Rich Motif ND05_RS09305 PF07690 Major Facilitator Superfamily ND05_RS09310 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ND05_RS09310 PF03923 Uncharacterized lipoprotein ND05_RS09315 PF01722 BolA-like protein ND05_RS09325 PF05698 Bacterial trigger factor protein (TF) C-terminus ND05_RS09325 PF05697 Bacterial trigger factor protein (TF) ND05_RS09325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND05_RS09330 PF00574 Clp protease ND05_RS09335 PF10431 C-terminal, D2-small domain, of ClpB protein ND05_RS09335 PF07724 AAA domain (Cdc48 subfamily) ND05_RS09335 PF06689 ClpX C4-type zinc finger ND05_RS09340 PF00004 ATPase family associated with various cellular activities (AAA) ND05_RS09340 PF05362 Lon protease (S16) C-terminal proteolytic domain ND05_RS09340 PF02190 ATP-dependent protease La (LON) substrate-binding domain ND05_RS09345 PF00216 Bacterial DNA-binding protein ND05_RS09350 PF13145 PPIC-type PPIASE domain ND05_RS09365 PF06508 Queuosine biosynthesis protein QueC ND05_RS09370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND05_RS09370 PF12793 Sugar transport-related sRNA regulator N-term ND05_RS09380 PF01037 Lrp/AsnC ligand binding domain ND05_RS09380 PF13404 AsnC-type helix-turn-helix domain ND05_RS09385 PF00664 ABC transporter transmembrane region ND05_RS09385 PF00005 ABC transporter ND05_RS09390 PF00664 ABC transporter transmembrane region ND05_RS09390 PF00005 ABC transporter ND05_RS09395 PF00543 Nitrogen regulatory protein P-II ND05_RS09400 PF00909 Ammonium Transporter Family ND05_RS09410 PF09619 Type III secretion system lipoprotein chaperone (YscW) ND05_RS09415 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ND05_RS09425 PF07237 Protein of unknown function (DUF1428) ND05_RS09430 PF12792 CSS motif domain associated with EAL ND05_RS09430 PF00563 EAL domain ND05_RS09435 PF10777 Inner membrane protein YlaC ND05_RS09440 PF14602 Hexapeptide repeat of succinyl-transferase ND05_RS09440 PF12464 Maltose acetyltransferase ND05_RS09445 PF05321 Haemolysin expression modulating protein ND05_RS09450 PF10757 Biofilm formation regulator YbaJ ND05_RS09455 PF00873 AcrB/AcrD/AcrF family ND05_RS09460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND05_RS09460 PF00529 HlyD membrane-fusion protein of T1SS ND05_RS09465 PF00440 Bacterial regulatory proteins, tetR family ND05_RS09465 PF08361 MAATS-type transcriptional repressor, C-terminal region ND05_RS09475 PF13007 Transposase C of IS166 homeodomain ND05_RS09475 PF13817 IS66 C-terminal element ND05_RS09475 PF13005 zinc-finger binding domain of transposase IS66 ND05_RS09475 PF03050 Transposase IS66 family ND05_RS09480 PF05717 IS66 Orf2 like protein ND05_RS09490 PF12794 Mechanosensitive ion channel inner membrane domain 1 ND05_RS09490 PF00924 Mechanosensitive ion channel ND05_RS09490 PF12795 Mechanosensitive ion channel porin domain ND05_RS09495 PF10689 Protein of unknown function (DUF2496) ND05_RS09500 PF07445 Primosomal replication protein priC ND05_RS09505 PF04304 Protein of unknown function (DUF454) ND05_RS09515 PF00156 Phosphoribosyl transferase domain ND05_RS09520 PF12170 DNA polymerase III tau subunit V interacting with alpha ND05_RS09520 PF12169 DNA polymerase III subunits gamma and tau domain III ND05_RS09520 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ND05_RS09525 PF02575 YbaB/EbfC DNA-binding family ND05_RS09530 PF02132 RecR protein ND05_RS09530 PF13662 Toprim domain ND05_RS09535 PF00183 Hsp90 protein ND05_RS09535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS09545 PF05191 Adenylate kinase, active site lid ND05_RS09550 PF00762 Ferrochelatase ND05_RS09555 PF07859 alpha/beta hydrolase fold ND05_RS09560 PF00294 pfkB family carbohydrate kinase ND05_RS09565 PF02254 TrkA-N domain ND05_RS09565 PF00999 Sodium/hydrogen exchanger family ND05_RS09570 PF07690 Major Facilitator Superfamily ND05_RS09580 PF02872 5'-nucleotidase, C-terminal domain ND05_RS09580 PF00149 Calcineurin-like phosphoesterase ND05_RS09585 PF04073 Aminoacyl-tRNA editing domain ND05_RS09595 PF01963 TraB family ND05_RS09605 PF01381 Helix-turn-helix ND05_RS09610 PF00403 Heavy-metal-associated domain ND05_RS09615 PF04960 Glutaminase ND05_RS09620 PF13520 Amino acid permease ND05_RS09625 PF13411 MerR HTH family regulatory protein ND05_RS09630 PF01957 NfeD-like C-terminal, partner-binding ND05_RS09635 PF01145 SPFH domain / Band 7 family ND05_RS09635 PF16200 C-terminal region of band_7 ND05_RS09640 PF00005 ABC transporter ND05_RS09645 PF03649 Uncharacterised protein family (UPF0014) ND05_RS09650 PF00085 Thioredoxin ND05_RS09655 PF00106 short chain dehydrogenase ND05_RS09660 PF13472 GDSL-like Lipase/Acylhydrolase family ND05_RS09665 PF00005 ABC transporter ND05_RS09675 PF03527 RHS protein ND05_RS09675 PF05593 RHS Repeat ND05_RS09675 PF14220 Domain of unknown function (DUF4329) ND05_RS09695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS09695 PF03466 LysR substrate binding domain ND05_RS09700 PF04115 Ureidoglycolate lyase ND05_RS09705 PF09339 IclR helix-turn-helix domain ND05_RS09705 PF01614 Bacterial transcriptional regulator ND05_RS09710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND05_RS09710 PF00205 Thiamine pyrophosphate enzyme, central domain ND05_RS09710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND05_RS09715 PF01261 Xylose isomerase-like TIM barrel ND05_RS09720 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ND05_RS09720 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ND05_RS09725 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ND05_RS09730 PF01979 Amidohydrolase family ND05_RS09735 PF00860 Permease family ND05_RS09740 PF02595 Glycerate kinase family ND05_RS09745 PF07883 Cupin domain ND05_RS09745 PF05899 Protein of unknown function (DUF861) ND05_RS09750 PF01546 Peptidase family M20/M25/M40 ND05_RS09755 PF02615 Malate/L-lactate dehydrogenase ND05_RS09760 PF02629 CoA binding domain ND05_RS09760 PF00549 CoA-ligase ND05_RS09765 PF06545 Protein of unknown function (DUF1116) ND05_RS09770 PF11392 Protein of unknown function (DUF2877) ND05_RS09775 PF00696 Amino acid kinase family ND05_RS09780 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ND05_RS09780 PF02222 ATP-grasp domain ND05_RS09785 PF00731 AIR carboxylase ND05_RS09795 PF12850 Calcineurin-like phosphoesterase superfamily domain ND05_RS09800 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ND05_RS09805 PF09190 DALR domain ND05_RS09805 PF01406 tRNA synthetases class I (C) catalytic domain ND05_RS09810 PF04307 LexA-binding, inner membrane-associated putative hydrolase ND05_RS09820 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ND05_RS09820 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ND05_RS09825 PF00419 Fimbrial protein ND05_RS09835 PF13954 PapC N-terminal domain ND05_RS09835 PF00577 Outer membrane usher protein ND05_RS09835 PF13953 PapC C-terminal domain ND05_RS09840 PF00419 Fimbrial protein ND05_RS09845 PF00419 Fimbrial protein ND05_RS09850 PF00196 Bacterial regulatory proteins, luxR family ND05_RS09850 PF00072 Response regulator receiver domain ND05_RS09860 PF00589 Phage integrase family ND05_RS09890 PF07471 Phage DNA packaging protein Nu1 ND05_RS09895 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND05_RS09900 PF02831 gpW ND05_RS09910 PF01972 Serine dehydrogenase proteinase ND05_RS09910 PF01957 NfeD-like C-terminal, partner-binding ND05_RS09920 PF03864 Phage major capsid protein E ND05_RS09960 PF06791 Prophage tail length tape measure protein ND05_RS10000 PF06316 Enterobacterial Ail/Lom protein ND05_RS10010 PF07484 Phage Tail Collar Domain ND05_RS10010 PF03335 Phage tail fibre repeat ND05_RS10015 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND05_RS10025 PF08242 Methyltransferase domain ND05_RS10030 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND05_RS10035 PF00561 alpha/beta hydrolase fold ND05_RS10040 PF01278 Omptin family ND05_RS10055 PF12833 Helix-turn-helix domain ND05_RS10065 PF14488 Domain of unknown function (DUF4434) ND05_RS10070 PF13283 Bacteriophage N adsorption protein A C-term ND05_RS10075 PF13632 Glycosyl transferase family group 2 ND05_RS10075 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ND05_RS10080 PF01609 Transposase DDE domain ND05_RS10080 PF13808 DDE_Tnp_1-associated ND05_RS10130 PF05488 PAAR motif ND05_RS10130 PF05593 RHS Repeat ND05_RS10140 PF04717 Type VI secretion system, phage-baseplate injector ND05_RS10145 PF00512 His Kinase A (phospho-acceptor) domain ND05_RS10145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS10145 PF00672 HAMP domain ND05_RS10150 PF00486 Transcriptional regulatory protein, C terminal ND05_RS10150 PF00072 Response regulator receiver domain ND05_RS10160 PF02321 Outer membrane efflux protein ND05_RS10165 PF11604 Copper binding periplasmic protein CusF ND05_RS10170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND05_RS10170 PF00529 HlyD membrane-fusion protein of T1SS ND05_RS10175 PF00873 AcrB/AcrD/AcrF family ND05_RS10180 PF00324 Amino acid permease ND05_RS10185 PF00924 Mechanosensitive ion channel ND05_RS10190 PF00881 Nitroreductase family ND05_RS10195 PF04237 YjbR ND05_RS10200 PF06643 Protein of unknown function (DUF1158) ND05_RS10205 PF04107 Glutamate-cysteine ligase family 2(GCS2) ND05_RS10220 PF01848 Hok/gef family ND05_RS10225 PF01848 Hok/gef family ND05_RS10230 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ND05_RS10230 PF01648 4'-phosphopantetheinyl transferase superfamily ND05_RS10235 PF07715 TonB-dependent Receptor Plug Domain ND05_RS10235 PF00593 TonB dependent receptor ND05_RS10245 PF00756 Putative esterase ND05_RS10245 PF11806 Domain of unknown function (DUF3327) ND05_RS10250 PF03621 MbtH-like protein ND05_RS10255 PF00501 AMP-binding enzyme ND05_RS10255 PF00668 Condensation domain ND05_RS10255 PF00550 Phosphopantetheine attachment site ND05_RS10255 PF00975 Thioesterase domain ND05_RS10265 PF00005 ABC transporter ND05_RS10270 PF01032 FecCD transport family ND05_RS10275 PF01032 FecCD transport family ND05_RS10280 PF05977 Transmembrane secretion effector ND05_RS10285 PF01497 Periplasmic binding protein ND05_RS10295 PF00425 chorismate binding enzyme ND05_RS10300 PF13193 AMP-binding enzyme C-terminal domain ND05_RS10300 PF00501 AMP-binding enzyme ND05_RS10315 PF03061 Thioesterase superfamily ND05_RS10320 PF13722 5TM C-terminal transporter carbon starvation CstA ND05_RS10320 PF02554 Carbon starvation protein CstA ND05_RS10325 PF04328 Selenoprotein, putative ND05_RS10330 PF00465 Iron-containing alcohol dehydrogenase ND05_RS10335 PF00155 Aminotransferase class I and II ND05_RS10340 PF02195 ParB-like nuclease domain ND05_RS10345 PF01507 Phosphoadenosine phosphosulfate reductase family ND05_RS10345 PF11922 Domain of unknown function (DUF3440) ND05_RS10350 PF03466 LysR substrate binding domain ND05_RS10350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS10355 PF13098 Thioredoxin-like domain ND05_RS10360 PF10417 C-terminal domain of 1-Cys peroxiredoxin ND05_RS10360 PF00578 AhpC/TSA family ND05_RS10365 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND05_RS10365 PF13192 Thioredoxin domain ND05_RS10370 PF00582 Universal stress protein family ND05_RS10375 PF00107 Zinc-binding dehydrogenase ND05_RS10375 PF13823 Alcohol dehydrogenase GroES-associated ND05_RS10375 PF08240 Alcohol dehydrogenase GroES-like domain ND05_RS10385 PF01272 Transcription elongation factor, GreA/GreB, C-term ND05_RS10385 PF14760 Rnk N-terminus ND05_RS10395 PF00445 Ribonuclease T2 family ND05_RS10400 PF00939 Sodium:sulfate symporter transmembrane region ND05_RS10405 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ND05_RS10410 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase ND05_RS10415 PF04223 Citrate lyase, alpha subunit (CitF) ND05_RS10420 PF03328 HpcH/HpaI aldolase/citrate lyase family ND05_RS10425 PF06857 Malonate decarboxylase delta subunit (MdcD) ND05_RS10430 PF08218 Citrate lyase ligase C-terminal domain ND05_RS10435 PF17203 Single cache domain 3 ND05_RS10435 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ND05_RS10435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS10435 PF00989 PAS fold ND05_RS10440 PF00072 Response regulator receiver domain ND05_RS10440 PF12431 Transcriptional regulator ND05_RS10445 PF03606 C4-dicarboxylate anaerobic carrier ND05_RS10455 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP ND05_RS10460 PF00313 'Cold-shock' DNA-binding domain ND05_RS10465 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ND05_RS10470 PF00795 Carbon-nitrogen hydrolase ND05_RS10475 PF02416 mttA/Hcf106 family ND05_RS10480 PF04055 Radical SAM superfamily ND05_RS10480 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ND05_RS10490 PF03466 LysR substrate binding domain ND05_RS10490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS10500 PF03099 Biotin/lipoate A/B protein ligase family ND05_RS10505 PF04359 Protein of unknown function (DUF493) ND05_RS10510 PF00768 D-alanyl-D-alanine carboxypeptidase ND05_RS10510 PF07943 Penicillin-binding protein 5, C-terminal domain ND05_RS10515 PF05036 Sporulation related domain ND05_RS10515 PF03330 Lytic transglycolase ND05_RS10520 PF01098 Cell cycle protein ND05_RS10525 PF00905 Penicillin binding protein transpeptidase domain ND05_RS10525 PF03717 Penicillin-binding Protein dimerisation domain ND05_RS10530 PF02590 Predicted SPOUT methyltransferase ND05_RS10540 PF00300 Histidine phosphatase superfamily (branch 1) ND05_RS10545 PF01467 Cytidylyltransferase-like ND05_RS10550 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ND05_RS10550 PF06144 DNA polymerase III, delta subunit ND05_RS10555 PF04390 Lipopolysaccharide-assembly ND05_RS10560 PF00133 tRNA synthetases class I (I, L, M and V) ND05_RS10560 PF13603 Leucyl-tRNA synthetase, Domain 2 ND05_RS10560 PF08264 Anticodon-binding domain of tRNA ND05_RS10565 PF07295 Zinc-ribbon containing domain ND05_RS10570 PF08238 Sel1 repeat ND05_RS10575 PF06889 Protein of unknown function (DUF1266) ND05_RS10600 PF06889 Protein of unknown function (DUF1266) ND05_RS10610 PF00012 Hsp70 protein ND05_RS10615 PF01156 Inosine-uridine preferring nucleoside hydrolase ND05_RS10620 PF00005 ABC transporter ND05_RS10625 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS10630 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS10635 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND05_RS10650 PF00795 Carbon-nitrogen hydrolase ND05_RS10655 PF00571 CBS domain ND05_RS10655 PF03471 Transporter associated domain ND05_RS10660 PF02130 Uncharacterized protein family UPF0054 ND05_RS10665 PF02562 PhoH-like protein ND05_RS10670 PF00919 Uncharacterized protein family UPF0004 ND05_RS10670 PF01938 TRAM domain ND05_RS10670 PF04055 Radical SAM superfamily ND05_RS10675 PF01494 FAD binding domain ND05_RS10720 PF00733 Asparagine synthase ND05_RS10720 PF13537 Glutamine amidotransferase domain ND05_RS10730 PF13344 Haloacid dehalogenase-like hydrolase ND05_RS10735 PF01047 MarR family ND05_RS10735 PF00480 ROK family ND05_RS10740 PF01979 Amidohydrolase family ND05_RS10745 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ND05_RS10750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ND05_RS10750 PF00367 phosphotransferase system, EIIB ND05_RS10750 PF02378 Phosphotransferase system, EIIC ND05_RS10755 PF00749 tRNA synthetases class I (E and Q), catalytic domain ND05_RS10755 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ND05_RS10760 PF03573 outer membrane porin, OprD family ND05_RS10765 PF13982 YbfN-like lipoprotein ND05_RS10770 PF01475 Ferric uptake regulator family ND05_RS10780 PF00258 Flavodoxin ND05_RS10785 PF01402 Ribbon-helix-helix protein, copG family ND05_RS10790 PF12697 Alpha/beta hydrolase family ND05_RS10795 PF03925 SeqA protein C-terminal domain ND05_RS10795 PF17206 SeqA protein N-terminal domain ND05_RS10800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ND05_RS10800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ND05_RS10800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ND05_RS10800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ND05_RS10805 PF13520 Amino acid permease ND05_RS10810 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ND05_RS10810 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ND05_RS10810 PF01276 Orn/Lys/Arg decarboxylase, major domain ND05_RS10820 PF00072 Response regulator receiver domain ND05_RS10820 PF00486 Transcriptional regulatory protein, C terminal ND05_RS10825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS10825 PF00512 His Kinase A (phospho-acceptor) domain ND05_RS10825 PF02702 Osmosensitive K+ channel His kinase sensor domain ND05_RS10825 PF13492 GAF domain ND05_RS10825 PF13493 Domain of unknown function (DUF4118) ND05_RS10830 PF02669 K+-transporting ATPase, c chain ND05_RS10840 PF03814 Potassium-transporting ATPase A subunit ND05_RS10845 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) ND05_RS10850 PF10725 Protein of unknown function (DUF2517) ND05_RS10910 PF08349 Protein of unknown function (DUF1722) ND05_RS10915 PF03441 FAD binding domain of DNA photolyase ND05_RS10915 PF00875 DNA photolyase ND05_RS10920 PF00854 POT family ND05_RS10925 PF01784 NIF3 (NGG1p interacting factor 3) ND05_RS10930 PF02682 Carboxyltransferase domain, subdomain C and D ND05_RS10935 PF02626 Carboxyltransferase domain, subdomain A and B ND05_RS10940 PF03746 LamB/YcsF family ND05_RS10945 PF06827 Zinc finger found in FPG and IleRS ND05_RS10945 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ND05_RS10945 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ND05_RS10950 PF05145 Transition state regulatory protein AbrB ND05_RS10955 PF00419 Fimbrial protein ND05_RS10960 PF02753 Pili assembly chaperone PapD, C-terminal domain ND05_RS10960 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND05_RS10965 PF00577 Outer membrane usher protein ND05_RS10965 PF13954 PapC N-terminal domain ND05_RS10965 PF13953 PapC C-terminal domain ND05_RS10970 PF00419 Fimbrial protein ND05_RS10975 PF00285 Citrate synthase, C-terminal domain ND05_RS10990 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ND05_RS10995 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ND05_RS11000 PF00890 FAD binding domain ND05_RS11000 PF02910 Fumarate reductase flavoprotein C-term ND05_RS11005 PF13085 2Fe-2S iron-sulfur cluster binding domain ND05_RS11010 PF16078 2-oxoglutarate dehydrogenase N-terminus ND05_RS11010 PF00676 Dehydrogenase E1 component ND05_RS11010 PF16870 2-oxoglutarate dehydrogenase C-terminal ND05_RS11010 PF02779 Transketolase, pyrimidine binding domain ND05_RS11015 PF02817 e3 binding domain ND05_RS11015 PF00364 Biotin-requiring enzyme ND05_RS11015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ND05_RS11020 PF08442 ATP-grasp domain ND05_RS11020 PF00549 CoA-ligase ND05_RS11025 PF00549 CoA-ligase ND05_RS11025 PF02629 CoA binding domain ND05_RS11030 PF00392 Bacterial regulatory proteins, gntR family ND05_RS11030 PF07702 UTRA domain ND05_RS11035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND05_RS11035 PF02378 Phosphotransferase system, EIIC ND05_RS11035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND05_RS11040 PF07748 Glycosyl hydrolases family 38 C-terminal domain ND05_RS11040 PF09261 Alpha mannosidase middle domain ND05_RS11040 PF01074 Glycosyl hydrolases family 38 N-terminal domain ND05_RS11050 PF01654 Cytochrome bd terminal oxidase subunit I ND05_RS11055 PF02322 Cytochrome bd terminal oxidase subunit II ND05_RS11060 PF08173 Membrane bound YbgT-like protein ND05_RS11065 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) ND05_RS11070 PF03061 Thioesterase superfamily ND05_RS11075 PF01618 MotA/TolQ/ExbB proton channel family ND05_RS11080 PF02472 Biopolymer transport protein ExbD/TolR ND05_RS11085 PF06519 TolA C-terminal ND05_RS11090 PF07676 WD40-like Beta Propeller Repeat ND05_RS11090 PF04052 TolB amino-terminal domain ND05_RS11095 PF00691 OmpA family ND05_RS11100 PF16331 TolA binding protein trimerisation ND05_RS11100 PF13174 Tetratricopeptide repeat ND05_RS11140 PF02445 Quinolinate synthetase A protein ND05_RS11145 PF04973 Nicotinamide mononucleotide transporter ND05_RS11150 PF01545 Cation efflux family ND05_RS11155 PF13985 YbgS-like protein ND05_RS11165 PF00793 DAHP synthetase I family ND05_RS11170 PF00300 Histidine phosphatase superfamily (branch 1) ND05_RS11175 PF01263 Aldose 1-epimerase ND05_RS11180 PF10509 Galactokinase galactose-binding signature ND05_RS11180 PF08544 GHMP kinases C terminal ND05_RS11180 PF00288 GHMP kinases N terminal domain ND05_RS11185 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ND05_RS11185 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ND05_RS11190 PF16363 GDP-mannose 4,6 dehydratase ND05_RS11195 PF00005 ABC transporter ND05_RS11200 PF03459 TOBE domain ND05_RS11200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS11205 PF10766 Multidrug efflux pump-associated protein AcrZ ND05_RS11220 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS11225 PF03459 TOBE domain ND05_RS11225 PF00005 ABC transporter ND05_RS11235 PF10282 Lactonase, 7-bladed beta-propeller ND05_RS11240 PF03466 LysR substrate binding domain ND05_RS11240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS11245 PF04303 PrpF protein ND05_RS11250 PF00939 Sodium:sulfate symporter transmembrane region ND05_RS11255 PF00330 Aconitase family (aconitate hydratase) ND05_RS11255 PF00694 Aconitase C-terminal domain ND05_RS11260 PF01095 Pectinesterase ND05_RS11270 PF01161 Phosphatidylethanolamine-binding protein ND05_RS11275 PF00202 Aminotransferase class-III ND05_RS11280 PF04055 Radical SAM superfamily ND05_RS11280 PF06968 Biotin and Thiamin Synthesis associated domain ND05_RS11285 PF00155 Aminotransferase class I and II ND05_RS11290 PF08241 Methyltransferase domain ND05_RS11300 PF17757 UvrB interaction domain ND05_RS11300 PF02151 UvrB/uvrC motif ND05_RS11300 PF04851 Type III restriction enzyme, res subunit ND05_RS11300 PF12344 Ultra-violet resistance protein B ND05_RS11300 PF00271 Helicase conserved C-terminal domain ND05_RS11305 PF01933 Uncharacterised protein family UPF0052 ND05_RS11310 PF06463 Molybdenum Cofactor Synthesis C ND05_RS11310 PF04055 Radical SAM superfamily ND05_RS11315 PF00994 Probable molybdopterin binding domain ND05_RS11320 PF01967 MoaC family ND05_RS11325 PF02597 ThiS family ND05_RS11330 PF02391 MoaE protein ND05_RS11335 PF01027 Inhibitor of apoptosis-promoting Bax1 ND05_RS11345 PF01027 Inhibitor of apoptosis-promoting Bax1 ND05_RS11350 PF03706 Lysylphosphatidylglycerol synthase TM region ND05_RS11355 PF13091 PLD-like domain ND05_RS11360 PF03372 Endonuclease/Exonuclease/phosphatase family ND05_RS11365 PF11076 Putative inner membrane protein YbhQ ND05_RS11380 PF00005 ABC transporter ND05_RS11385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND05_RS11390 PF00440 Bacterial regulatory proteins, tetR family ND05_RS11390 PF09209 Tetracyclin repressor-like, C-terminal domain ND05_RS11400 PF08719 Domain of unknown function (DUF1768) ND05_RS11410 PF00270 DEAD/DEAH box helicase ND05_RS11410 PF13307 Helicase C-terminal domain ND05_RS11410 PF06733 DEAD_2 ND05_RS11415 PF02885 Glycosyl transferase family, helical bundle domain ND05_RS11420 PF02615 Malate/L-lactate dehydrogenase ND05_RS11425 PF07338 Protein of unknown function (DUF1471) ND05_RS11430 PF01258 Prokaryotic dksA/traR C4-type zinc finger ND05_RS11435 PF18331 PKHD-type hydroxylase C-terminal domain ND05_RS11435 PF13640 2OG-Fe(II) oxygenase superfamily ND05_RS11440 PF07715 TonB-dependent Receptor Plug Domain ND05_RS11440 PF00593 TonB dependent receptor ND05_RS11445 PF07338 Protein of unknown function (DUF1471) ND05_RS11450 PF05971 RNA methyltransferase ND05_RS11455 PF00924 Mechanosensitive ion channel ND05_RS11460 PF00005 ABC transporter ND05_RS11465 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS11470 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND05_RS11485 PF00210 Ferritin-like domain ND05_RS11495 PF00892 EamA-like transporter family ND05_RS11500 PF13505 Outer membrane protein beta-barrel domain ND05_RS11505 PF00884 Sulfatase ND05_RS11515 PF02742 Iron dependent repressor, metal binding and dimerisation domain ND05_RS11515 PF01325 Iron dependent repressor, N-terminal DNA binding domain ND05_RS11520 PF03600 Citrate transporter ND05_RS11525 PF17969 L,D-transpeptidase C-terminal domain ND05_RS11525 PF03734 L,D-transpeptidase catalytic domain ND05_RS11530 PF00005 ABC transporter ND05_RS11530 PF12848 ABC transporter ND05_RS11535 PF07350 Protein of unknown function (DUF1479) ND05_RS11545 PF01228 Glycine radical ND05_RS11545 PF02901 Pyruvate formate lyase-like ND05_RS11550 PF04055 Radical SAM superfamily ND05_RS11555 PF00923 Transaldolase/Fructose-6-phosphate aldolase ND05_RS11560 PF00899 ThiF family ND05_RS11565 PF03453 MoeA N-terminal region (domain I and II) ND05_RS11565 PF03454 MoeA C-terminal region (domain IV) ND05_RS11565 PF00994 Probable molybdopterin binding domain ND05_RS11570 PF01112 Asparaginase ND05_RS11575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND05_RS11575 PF00005 ABC transporter ND05_RS11580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND05_RS11585 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS11595 PF17153 Periplasmic sensor domain, extracellular ND05_RS11595 PF00563 EAL domain ND05_RS11600 PF00990 Diguanylate cyclase, GGDEF domain ND05_RS11600 PF17156 Gammaproteobacterial periplasmic sensor domain ND05_RS11605 PF00919 Uncharacterized protein family UPF0004 ND05_RS11605 PF18693 TRAM domain ND05_RS11605 PF04055 Radical SAM superfamily ND05_RS11610 PF10799 Biofilm formation protein (YliH/bssR) ND05_RS11615 PF07995 Glucose / Sorbosone dehydrogenase ND05_RS11625 PF07943 Penicillin-binding protein 5, C-terminal domain ND05_RS11625 PF00768 D-alanyl-D-alanine carboxypeptidase ND05_RS11630 PF00455 DeoR C terminal sensor domain ND05_RS11630 PF08220 DeoR-like helix-turn-helix domain ND05_RS11635 PF01569 PAP2 superfamily ND05_RS11640 PF07690 Major Facilitator Superfamily ND05_RS11655 PF07690 Major Facilitator Superfamily ND05_RS11660 PF00440 Bacterial regulatory proteins, tetR family ND05_RS11665 PF02080 TrkA-C domain ND05_RS11665 PF06826 Predicted Permease Membrane Region ND05_RS11670 PF11045 Putative inner membrane protein of Enterobacteriaceae ND05_RS11675 PF00462 Glutaredoxin ND05_RS11680 PF07214 Protein of unknown function (DUF1418) ND05_RS11685 PF00881 Nitroreductase family ND05_RS11690 PF08443 RimK-like ATP-grasp domain ND05_RS11690 PF18030 RimK PreATP-grasp domain ND05_RS11695 PF10722 Putative bacterial sensory transduction regulator ND05_RS11705 PF13416 Bacterial extracellular solute-binding protein ND05_RS11710 PF08402 TOBE domain ND05_RS11710 PF00005 ABC transporter ND05_RS11715 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS11720 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS11725 PF10767 Protein of unknown function (DUF2593) ND05_RS11730 PF05958 tRNA (Uracil-5-)-methyltransferase ND05_RS11735 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND05_RS11740 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS11745 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS11750 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND05_RS11755 PF00005 ABC transporter ND05_RS11760 PF12883 Protein of unknown function (DUF3828) ND05_RS11765 PF01906 Putative heavy-metal-binding ND05_RS11770 PF01510 N-acetylmuramoyl-L-alanine amidase ND05_RS11775 PF01370 NAD dependent epimerase/dehydratase family ND05_RS11780 PF13460 NAD(P)H-binding ND05_RS11780 PF11066 Protein of unknown function (DUF2867) ND05_RS11785 PF01212 Beta-eliminating lyase ND05_RS11790 PF00205 Thiamine pyrophosphate enzyme, central domain ND05_RS11790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND05_RS11790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND05_RS11795 PF00175 Oxidoreductase NAD-binding domain ND05_RS11795 PF00111 2Fe-2S iron-sulfur cluster binding domain ND05_RS11795 PF00970 Oxidoreductase FAD-binding domain ND05_RS11800 PF03063 Prismane/CO dehydrogenase family ND05_RS11805 PF03956 Lysine exporter LysO ND05_RS11815 PF00230 Major intrinsic protein ND05_RS11820 PF11398 Protein of unknown function (DUF2813) ND05_RS11825 PF04393 Protein of unknown function (DUF535) ND05_RS11830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND05_RS11835 PF02687 FtsX-like permease family ND05_RS11835 PF12704 MacB-like periplasmic core domain ND05_RS11835 PF00005 ABC transporter ND05_RS11840 PF00313 'Cold-shock' DNA-binding domain ND05_RS11845 PF02617 ATP-dependent Clp protease adaptor protein ClpS ND05_RS11850 PF10431 C-terminal, D2-small domain, of ClpB protein ND05_RS11850 PF02861 Clp amino terminal domain, pathogenicity island component ND05_RS11850 PF17871 AAA lid domain ND05_RS11850 PF00004 ATPase family associated with various cellular activities (AAA) ND05_RS11850 PF07724 AAA domain (Cdc48 subfamily) ND05_RS11855 PF13005 zinc-finger binding domain of transposase IS66 ND05_RS11855 PF13817 IS66 C-terminal element ND05_RS11855 PF03050 Transposase IS66 family ND05_RS11855 PF13007 Transposase C of IS166 homeodomain ND05_RS11860 PF05717 IS66 Orf2 like protein ND05_RS11875 PF01176 Translation initiation factor 1A / IF-1 ND05_RS11880 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ND05_RS11885 PF00664 ABC transporter transmembrane region ND05_RS11885 PF00005 ABC transporter ND05_RS11890 PF00664 ABC transporter transmembrane region ND05_RS11890 PF00005 ABC transporter ND05_RS11895 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND05_RS11905 PF01037 Lrp/AsnC ligand binding domain ND05_RS11910 PF01580 FtsK/SpoIIIE family ND05_RS11910 PF09397 Ftsk gamma domain ND05_RS11910 PF17854 FtsK alpha domain ND05_RS11910 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ND05_RS11915 PF03548 Outer membrane lipoprotein carrier protein LolA ND05_RS11920 PF16193 AAA C-terminal domain ND05_RS11920 PF00004 ATPase family associated with various cellular activities (AAA) ND05_RS11920 PF12002 MgsA AAA+ ATPase C terminal ND05_RS11925 PF02403 Seryl-tRNA synthetase N-terminal domain ND05_RS11925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ND05_RS11930 PF01568 Molydopterin dinucleotide binding domain ND05_RS11930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND05_RS11930 PF00384 Molybdopterin oxidoreductase ND05_RS11935 PF12800 4Fe-4S binding domain ND05_RS11935 PF13247 4Fe-4S dicluster domain ND05_RS11940 PF04976 DMSO reductase anchor subunit (DmsC) ND05_RS11945 PF00857 Isochorismatase family ND05_RS11950 PF07690 Major Facilitator Superfamily ND05_RS11955 PF13520 Amino acid permease ND05_RS11960 PF03466 LysR substrate binding domain ND05_RS11960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS11965 PF02525 Flavodoxin-like fold ND05_RS11970 PF04055 Radical SAM superfamily ND05_RS11975 PF01228 Glycine radical ND05_RS11975 PF02901 Pyruvate formate lyase-like ND05_RS11980 PF01226 Formate/nitrite transporter ND05_RS11985 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ND05_RS11985 PF18381 YcaO cyclodehydratase C-terminal domain ND05_RS11990 PF04239 Protein of unknown function (DUF421) ND05_RS11995 PF00266 Aminotransferase class-V ND05_RS12000 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ND05_RS12005 PF01435 Peptidase family M48 ND05_RS12010 PF02224 Cytidylate kinase ND05_RS12015 PF00575 S1 RNA binding domain ND05_RS12020 PF00216 Bacterial DNA-binding protein ND05_RS12025 PF00753 Metallo-beta-lactamase superfamily ND05_RS12025 PF03772 Competence protein ND05_RS12030 PF00664 ABC transporter transmembrane region ND05_RS12030 PF00005 ABC transporter ND05_RS12035 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ND05_RS12040 PF06224 Winged helix DNA-binding domain ND05_RS12045 PF03966 Trm112p-like protein ND05_RS12050 PF02348 Cytidylyltransferase ND05_RS12055 PF01636 Phosphotransferase enzyme family ND05_RS12060 PF02698 DUF218 domain ND05_RS12065 PF13847 Methyltransferase domain ND05_RS12070 PF03882 MukF winged-helix domain ND05_RS12070 PF17193 MukF C-terminal domain ND05_RS12070 PF17192 MukF middle domain ND05_RS12075 PF04288 MukE-like family ND05_RS12080 PF16330 MukB hinge domain ND05_RS12080 PF04310 MukB N-terminal ND05_RS12085 PF01471 Putative peptidoglycan binding domain ND05_RS12085 PF03734 L,D-transpeptidase catalytic domain ND05_RS12095 PF05951 Bacterial protein of unknown function (DUF882) ND05_RS12100 PF00753 Metallo-beta-lactamase superfamily ND05_RS12105 PF00155 Aminotransferase class I and II ND05_RS12110 PF00267 Gram-negative porin ND05_RS12115 PF00152 tRNA synthetases class II (D, K and N) ND05_RS12115 PF01336 OB-fold nucleic acid binding domain ND05_RS12120 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ND05_RS12120 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ND05_RS12125 PF11940 Domain of unknown function (DUF3458) Ig-like fold ND05_RS12125 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ND05_RS12125 PF01433 Peptidase family M1 domain ND05_RS12130 PF00005 ABC transporter ND05_RS12135 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS12140 PF00296 Luciferase-like monooxygenase ND05_RS12145 PF09084 NMT1/THI5 like ND05_RS12150 PF03358 NADPH-dependent FMN reductase ND05_RS12155 PF00419 Fimbrial protein ND05_RS12170 PF00419 Fimbrial protein ND05_RS12175 PF00419 Fimbrial protein ND05_RS12180 PF00419 Fimbrial protein ND05_RS12185 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND05_RS12185 PF02753 Pili assembly chaperone PapD, C-terminal domain ND05_RS12190 PF01180 Dihydroorotate dehydrogenase ND05_RS12195 PF07126 Cell-division protein ZapC ND05_RS12200 PF03476 MOSC N-terminal beta barrel domain ND05_RS12200 PF00111 2Fe-2S iron-sulfur cluster binding domain ND05_RS12200 PF03473 MOSC domain ND05_RS12205 PF01170 Putative RNA methylase family UPF0020 ND05_RS12205 PF02926 THUMP domain ND05_RS12205 PF10672 S-adenosylmethionine-dependent methyltransferase ND05_RS12210 PF12848 ABC transporter ND05_RS12210 PF16326 ABC transporter C-terminal domain ND05_RS12210 PF00005 ABC transporter ND05_RS12215 PF04403 Paraquat-inducible protein A ND05_RS12220 PF02470 MlaD protein ND05_RS12225 PF03886 ABC-type transport auxiliary lipoprotein component ND05_RS12230 PF04957 Ribosome modulation factor ND05_RS12235 PF07977 FabA-like domain ND05_RS12240 PF13654 AAA domain ND05_RS12240 PF05362 Lon protease (S16) C-terminal proteolytic domain ND05_RS12245 PF06303 MatP N-terminal domain ND05_RS12245 PF17414 MatP C-terminal ribbon-helix-helix domain ND05_RS12250 PF00691 OmpA family ND05_RS12250 PF01389 OmpA-like transmembrane domain ND05_RS12260 PF03846 Cell division inhibitor SulA ND05_RS12265 PF04993 TfoX N-terminal domain ND05_RS12265 PF04994 TfoX C-terminal domain ND05_RS12270 PF12805 FUSC-like inner membrane protein yccS ND05_RS12275 PF03733 Inner membrane component domain ND05_RS12280 PF00580 UvrD/REP helicase N-terminal domain ND05_RS12280 PF13361 UvrD-like helicase C-terminal domain ND05_RS12280 PF12462 DNA helicase IV / RNA helicase N terminal ND05_RS12285 PF02142 MGS-like domain ND05_RS12290 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ND05_RS12295 PF13380 CoA binding domain ND05_RS12300 PF08755 Hemimethylated DNA-binding protein YccV like ND05_RS12305 PF10672 S-adenosylmethionine-dependent methyltransferase ND05_RS12305 PF17785 PUA-like domain ND05_RS12310 PF00708 Acylphosphatase ND05_RS12315 PF04358 DsrC like protein ND05_RS12320 PF01027 Inhibitor of apoptosis-promoting Bax1 ND05_RS12340 PF07358 Protein of unknown function (DUF1482) ND05_RS12345 PF05358 DicB protein ND05_RS12360 PF07151 Protein of unknown function (DUF1391) ND05_RS12370 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT ND05_RS12380 PF17948 DnaT DNA-binding domain ND05_RS12435 PF01848 Hok/gef family ND05_RS12445 PF06147 Protein of unknown function (DUF968) ND05_RS12450 PF05866 Endodeoxyribonuclease RusA ND05_RS12465 PF01555 DNA methylase ND05_RS12475 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ND05_RS12490 PF04971 Bacteriophage P21 holin S ND05_RS12495 PF00959 Phage lysozyme ND05_RS12505 PF03245 Bacteriophage Rz lysis protein ND05_RS12530 PF00574 Clp protease ND05_RS12600 PF06316 Enterobacterial Ail/Lom protein ND05_RS12605 PF03335 Phage tail fibre repeat ND05_RS12605 PF08400 Prophage tail fibre N-terminal ND05_RS12605 PF07484 Phage Tail Collar Domain ND05_RS12650 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND05_RS12670 PF07358 Protein of unknown function (DUF1482) ND05_RS12675 PF05358 DicB protein ND05_RS12700 PF07151 Protein of unknown function (DUF1391) ND05_RS12715 PF01381 Helix-turn-helix ND05_RS12715 PF00717 Peptidase S24-like ND05_RS12740 PF01695 IstB-like ATP binding protein ND05_RS12745 PF07789 Protein of unknown function (DUF1627) ND05_RS12760 PF01848 Hok/gef family ND05_RS12770 PF06147 Protein of unknown function (DUF968) ND05_RS12775 PF05866 Endodeoxyribonuclease RusA ND05_RS12780 PF06530 Phage antitermination protein Q ND05_RS12795 PF12833 Helix-turn-helix domain ND05_RS12830 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ND05_RS12845 PF04971 Bacteriophage P21 holin S ND05_RS12850 PF07041 Protein of unknown function (DUF1327) ND05_RS12855 PF00959 Phage lysozyme ND05_RS12860 PF03245 Bacteriophage Rz lysis protein ND05_RS12870 PF06069 PerC transcriptional activator ND05_RS12875 PF13132 Domain of unknown function (DUF3950) ND05_RS12885 PF07471 Phage DNA packaging protein Nu1 ND05_RS12890 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND05_RS12895 PF02831 gpW ND05_RS12905 PF01343 Peptidase family S49 ND05_RS12915 PF03864 Phage major capsid protein E ND05_RS12985 PF06316 Enterobacterial Ail/Lom protein ND05_RS12990 PF03335 Phage tail fibre repeat ND05_RS12990 PF07484 Phage Tail Collar Domain ND05_RS12990 PF08400 Prophage tail fibre N-terminal ND05_RS13030 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND05_RS13035 PF00072 Response regulator receiver domain ND05_RS13035 PF00486 Transcriptional regulatory protein, C terminal ND05_RS13040 PF03264 NapC/NirT cytochrome c family, N-terminal region ND05_RS13045 PF18364 Molybdopterin oxidoreductase N-terminal domain ND05_RS13045 PF01568 Molydopterin dinucleotide binding domain ND05_RS13045 PF00384 Molybdopterin oxidoreductase ND05_RS13050 PF02613 Nitrate reductase delta subunit ND05_RS13060 PF01556 DnaJ C terminal domain ND05_RS13060 PF00226 DnaJ domain ND05_RS13070 PF00328 Histidine phosphatase superfamily (branch 2) ND05_RS13075 PF13993 YccJ-like protein ND05_RS13080 PF03358 NADPH-dependent FMN reductase ND05_RS13090 PF10685 Stress-induced bacterial acidophilic repeat motif ND05_RS13095 PF00860 Permease family ND05_RS13100 PF01613 Flavin reductase like domain ND05_RS13105 PF00881 Nitroreductase family ND05_RS13110 PF00561 alpha/beta hydrolase fold ND05_RS13115 PF01042 Endoribonuclease L-PSP ND05_RS13120 PF00857 Isochorismatase family ND05_RS13125 PF00296 Luciferase-like monooxygenase ND05_RS13130 PF00440 Bacterial regulatory proteins, tetR family ND05_RS13130 PF08362 YcdC-like protein, C-terminal region ND05_RS13135 PF01619 Proline dehydrogenase ND05_RS13135 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ND05_RS13135 PF14850 DNA-binding domain of Proline dehydrogenase ND05_RS13135 PF00171 Aldehyde dehydrogenase family ND05_RS13150 PF00474 Sodium:solute symporter family ND05_RS13165 PF03239 Iron permease FTR1 family ND05_RS13170 PF13473 Cupredoxin-like domain ND05_RS13170 PF09375 Imelysin ND05_RS13175 PF04261 Dyp-type peroxidase family ND05_RS13180 PF02562 PhoH-like protein ND05_RS13200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND05_RS13205 PF02811 PHP domain ND05_RS13210 PF02613 Nitrate reductase delta subunit ND05_RS13215 PF06496 Protein of unknown function (DUF1097) ND05_RS13220 PF03783 Curli production assembly/transport component CsgG ND05_RS13225 PF10614 Type VIII secretion system (T8SS), CsgF protein ND05_RS13230 PF10627 Curli assembly protein CsgE ND05_RS13235 PF00196 Bacterial regulatory proteins, luxR family ND05_RS13250 PF07012 Curlin associated repeat ND05_RS13255 PF07012 Curlin associated repeat ND05_RS13260 PF10610 Thin aggregative fimbriae synthesis protein ND05_RS13270 PF01661 Macro domain ND05_RS13275 PF13091 PLD-like domain ND05_RS13280 PF01757 Acyltransferase family ND05_RS13295 PF04349 Periplasmic glucan biosynthesis protein, MdoG ND05_RS13300 PF00535 Glycosyl transferase family 2 ND05_RS13305 PF07119 Protein of unknown function (DUF1375) ND05_RS13310 PF13984 MsyB protein ND05_RS13315 PF07690 Major Facilitator Superfamily ND05_RS13320 PF03279 Bacterial lipid A biosynthesis acyltransferase ND05_RS13325 PF00581 Rhodanese-like domain ND05_RS13325 PF12368 Rhodanase C-terminal ND05_RS13325 PF17773 UPF0176 acylphosphatase like domain ND05_RS13330 PF04264 YceI-like domain ND05_RS13335 PF01292 Prokaryotic cytochrome b561 ND05_RS13340 PF10968 Protein of unknown function (DUF2770) ND05_RS13345 PF01266 FAD dependent oxidoreductase ND05_RS13350 PF13991 BssS protein family ND05_RS13360 PF06183 DinI-like family ND05_RS13365 PF01979 Amidohydrolase family ND05_RS13370 PF07273 Protein of unknown function (DUF1439) ND05_RS13375 PF04399 Glutaredoxin 2, C terminal domain ND05_RS13375 PF13417 Glutathione S-transferase, N-terminal domain ND05_RS13380 PF07690 Major Facilitator Superfamily ND05_RS13385 PF13302 Acetyltransferase (GNAT) domain ND05_RS13390 PF04337 Protein of unknown function, DUF480 ND05_RS13395 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ND05_RS13400 PF03023 Lipid II flippase MurJ ND05_RS13405 PF05130 FlgN protein ND05_RS13410 PF04316 Anti-sigma-28 factor, FlgM ND05_RS13420 PF00460 Flagella basal body rod protein ND05_RS13425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND05_RS13425 PF00460 Flagella basal body rod protein ND05_RS13430 PF13861 FlgD Tudor-like domain ND05_RS13430 PF13860 FlgD Ig-like domain ND05_RS13430 PF03963 Flagellar hook capping protein - N-terminal region ND05_RS13435 PF07559 Flagellar basal body protein FlaE ND05_RS13435 PF00460 Flagella basal body rod protein ND05_RS13435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND05_RS13440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND05_RS13440 PF00460 Flagella basal body rod protein ND05_RS13445 PF00460 Flagella basal body rod protein ND05_RS13445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND05_RS13450 PF02107 Flagellar L-ring protein ND05_RS13455 PF02119 Flagellar P-ring protein ND05_RS13460 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ND05_RS13460 PF10135 Rod binding protein ND05_RS13465 PF00460 Flagella basal body rod protein ND05_RS13465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ND05_RS13470 PF00669 Bacterial flagellin N-terminal helical region ND05_RS13475 PF12111 Polyribonucleotide phosphorylase C terminal ND05_RS13475 PF00575 S1 RNA binding domain ND05_RS13475 PF10150 Ribonuclease E/G family ND05_RS13485 PF00849 RNA pseudouridylate synthase ND05_RS13485 PF01479 S4 domain ND05_RS13490 PF02545 Maf-like protein ND05_RS13495 PF02620 Large ribosomal RNA subunit accumulation protein YceD ND05_RS13500 PF01783 Ribosomal L32p protein family ND05_RS13505 PF02504 Fatty acid synthesis protein ND05_RS13510 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ND05_RS13510 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ND05_RS13515 PF00698 Acyl transferase domain ND05_RS13525 PF00550 Phosphopantetheine attachment site ND05_RS13530 PF02801 Beta-ketoacyl synthase, C-terminal domain ND05_RS13530 PF00109 Beta-ketoacyl synthase, N-terminal domain ND05_RS13535 PF01063 Amino-transferase class IV ND05_RS13540 PF02618 YceG-like family ND05_RS13545 PF02223 Thymidylate kinase ND05_RS13550 PF09115 DNA polymerase III, delta subunit, C terminal ND05_RS13555 PF01026 TatD related DNase ND05_RS13560 PF00367 phosphotransferase system, EIIB ND05_RS13560 PF02378 Phosphotransferase system, EIIC ND05_RS13565 PF00593 TonB dependent receptor ND05_RS13565 PF07715 TonB-dependent Receptor Plug Domain ND05_RS13570 PF01230 HIT domain ND05_RS13575 PF07233 Protein of unknown function (DUF1425) ND05_RS13580 PF13036 Peptidoglycan-synthase activator LpoB ND05_RS13585 PF01636 Phosphotransferase enzyme family ND05_RS13590 PF00933 Glycosyl hydrolase family 3 N terminal domain ND05_RS13595 PF05728 Uncharacterised protein family (UPF0227) ND05_RS13600 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND05_RS13610 PF05433 Glycine zipper 2TM domain ND05_RS13615 PF00440 Bacterial regulatory proteins, tetR family ND05_RS13620 PF07338 Protein of unknown function (DUF1471) ND05_RS13625 PF17969 L,D-transpeptidase C-terminal domain ND05_RS13625 PF01476 LysM domain ND05_RS13625 PF03734 L,D-transpeptidase catalytic domain ND05_RS13630 PF17757 UvrB interaction domain ND05_RS13630 PF02559 CarD-like/TRCF domain ND05_RS13630 PF00270 DEAD/DEAH box helicase ND05_RS13630 PF00271 Helicase conserved C-terminal domain ND05_RS13630 PF03461 TRCF domain ND05_RS13635 PF01757 Acyltransferase family ND05_RS13640 PF02687 FtsX-like permease family ND05_RS13640 PF12704 MacB-like periplasmic core domain ND05_RS13645 PF00005 ABC transporter ND05_RS13650 PF12704 MacB-like periplasmic core domain ND05_RS13650 PF02687 FtsX-like permease family ND05_RS13655 PF00480 ROK family ND05_RS13660 PF02146 Sir2 family ND05_RS13665 PF13416 Bacterial extracellular solute-binding protein ND05_RS13670 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS13685 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain ND05_RS13685 PF00589 Phage integrase family ND05_RS13765 PF13817 IS66 C-terminal element ND05_RS13765 PF13005 zinc-finger binding domain of transposase IS66 ND05_RS13765 PF03050 Transposase IS66 family ND05_RS13765 PF13007 Transposase C of IS166 homeodomain ND05_RS13770 PF05717 IS66 Orf2 like protein ND05_RS13800 PF01848 Hok/gef family ND05_RS13805 PF04076 Bacterial OB fold (BOF) protein ND05_RS13815 PF06147 Protein of unknown function (DUF968) ND05_RS13820 PF05866 Endodeoxyribonuclease RusA ND05_RS13825 PF03589 Antitermination protein ND05_RS13835 PF01555 DNA methylase ND05_RS13865 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ND05_RS13875 PF04971 Bacteriophage P21 holin S ND05_RS13900 PF00959 Phage lysozyme ND05_RS13910 PF03245 Bacteriophage Rz lysis protein ND05_RS13930 PF13132 Domain of unknown function (DUF3950) ND05_RS14010 PF06316 Enterobacterial Ail/Lom protein ND05_RS14015 PF07484 Phage Tail Collar Domain ND05_RS14015 PF03335 Phage tail fibre repeat ND05_RS14015 PF08400 Prophage tail fibre N-terminal ND05_RS14025 PF04806 EspF protein repeat ND05_RS14040 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ND05_RS14040 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ND05_RS14045 PF00374 Nickel-dependent hydrogenase ND05_RS14050 PF01292 Prokaryotic cytochrome b561 ND05_RS14055 PF01750 Hydrogenase maturation protease ND05_RS14060 PF07449 Hydrogenase-1 expression protein HyaE ND05_RS14065 PF04809 HupH hydrogenase expression protein, C-terminal conserved region ND05_RS14070 PF01654 Cytochrome bd terminal oxidase subunit I ND05_RS14075 PF02322 Cytochrome bd terminal oxidase subunit II ND05_RS14080 PF08173 Membrane bound YbgT-like protein ND05_RS14085 PF00328 Histidine phosphatase superfamily (branch 2) ND05_RS14090 PF02706 Chain length determinant protein ND05_RS14090 PF13614 AAA domain ND05_RS14090 PF13807 G-rich domain on putative tyrosine kinase ND05_RS14095 PF01451 Low molecular weight phosphotyrosine protein phosphatase ND05_RS14100 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ND05_RS14100 PF02563 Polysaccharide biosynthesis/export protein ND05_RS14100 PF10531 SLBB domain ND05_RS14105 PF06082 Exopolysaccharide biosynthesis protein YbjH ND05_RS14110 PF06251 Capsule biosynthesis GfcC ND05_RS14115 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF ND05_RS14125 PF00313 'Cold-shock' DNA-binding domain ND05_RS14130 PF00313 'Cold-shock' DNA-binding domain ND05_RS14140 PF15939 Putative antitoxin of bacterial toxin-antitoxin system ND05_RS14145 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system ND05_RS14150 PF12801 4Fe-4S binding domain ND05_RS14155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS14155 PF00512 His Kinase A (phospho-acceptor) domain ND05_RS14155 PF00072 Response regulator receiver domain ND05_RS14155 PF00672 HAMP domain ND05_RS14155 PF01627 Hpt domain ND05_RS14160 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain ND05_RS14160 PF00589 Phage integrase family ND05_RS14245 PF10800 Protein of unknown function (DUF2528) ND05_RS14275 PF00717 Peptidase S24-like ND05_RS14275 PF01381 Helix-turn-helix ND05_RS14295 PF06992 Replication protein P ND05_RS14305 PF05772 NinB protein ND05_RS14325 PF00149 Calcineurin-like phosphoesterase ND05_RS14375 PF05717 IS66 Orf2 like protein ND05_RS14380 PF13005 zinc-finger binding domain of transposase IS66 ND05_RS14380 PF03050 Transposase IS66 family ND05_RS14380 PF13817 IS66 C-terminal element ND05_RS14380 PF13007 Transposase C of IS166 homeodomain ND05_RS14390 PF04971 Bacteriophage P21 holin S ND05_RS14395 PF00959 Phage lysozyme ND05_RS14400 PF03245 Bacteriophage Rz lysis protein ND05_RS14415 PF13132 Domain of unknown function (DUF3950) ND05_RS14420 PF07471 Phage DNA packaging protein Nu1 ND05_RS14425 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND05_RS14430 PF02831 gpW ND05_RS14440 PF01343 Peptidase family S49 ND05_RS14450 PF03864 Phage major capsid protein E ND05_RS14520 PF06316 Enterobacterial Ail/Lom protein ND05_RS14585 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS14590 PF00005 ABC transporter ND05_RS14590 PF08402 TOBE domain ND05_RS14600 PF07687 Peptidase dimerisation domain ND05_RS14600 PF01546 Peptidase family M20/M25/M40 ND05_RS14605 PF08007 Cupin superfamily protein ND05_RS14610 PF08918 PhoQ Sensor ND05_RS14610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS14615 PF00486 Transcriptional regulatory protein, C terminal ND05_RS14615 PF00072 Response regulator receiver domain ND05_RS14620 PF00206 Lyase ND05_RS14620 PF08328 Adenylosuccinate lyase C-terminal ND05_RS14625 PF04356 Protein of unknown function (DUF489) ND05_RS14635 PF00293 NUDIX domain ND05_RS14640 PF00849 RNA pseudouridylate synthase ND05_RS14645 PF00180 Isocitrate/isopropylmalate dehydrogenase ND05_RS14655 PF07166 Protein of unknown function (DUF1398) ND05_RS14660 PF13411 MerR HTH family regulatory protein ND05_RS14665 PF04940 Sensors of blue-light using FAD ND05_RS14665 PF00563 EAL domain ND05_RS14670 PF10798 Biofilm development protein YmgB/AriR ND05_RS14680 PF10798 Biofilm development protein YmgB/AriR ND05_RS14690 PF12792 CSS motif domain associated with EAL ND05_RS14690 PF00563 EAL domain ND05_RS14715 PF16456 YmgD protein ND05_RS14720 PF13436 Glycine-zipper domain ND05_RS14735 PF03797 Autotransporter beta-domain ND05_RS14745 PF03776 Septum formation topological specificity factor MinE ND05_RS14750 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ND05_RS14755 PF03775 Septum formation inhibitor MinC, C-terminal domain ND05_RS14755 PF05209 Septum formation inhibitor MinC, N-terminal domain ND05_RS14765 PF05666 Fels-1 Prophage Protein-like ND05_RS14770 PF04151 Bacterial pre-peptidase C-terminal domain ND05_RS14775 PF05166 YcgL domain ND05_RS14780 PF01557 Fumarylacetoacetate (FAA) hydrolase family ND05_RS14785 PF03692 Putative zinc- or iron-chelating domain ND05_RS14790 PF06109 Haemolysin E (HlyE) ND05_RS14795 PF00717 Peptidase S24-like ND05_RS14800 PF00817 impB/mucB/samB family ND05_RS14800 PF13438 Domain of unknown function (DUF4113) ND05_RS14800 PF11798 IMS family HHH motif ND05_RS14800 PF11799 impB/mucB/samB family C-terminal domain ND05_RS14805 PF02600 Disulfide bond formation protein DsbB ND05_RS14810 PF06450 Bacterial Na+/H+ antiporter B (NhaB) ND05_RS14815 PF00392 Bacterial regulatory proteins, gntR family ND05_RS14815 PF07840 FadR C-terminal domain ND05_RS14820 PF04293 SpoVR like protein ND05_RS14825 PF01266 FAD dependent oxidoreductase ND05_RS14830 PF01168 Alanine racemase, N-terminal domain ND05_RS14830 PF00842 Alanine racemase, C-terminal domain ND05_RS14835 PF03471 Transporter associated domain ND05_RS14835 PF00999 Sodium/hydrogen exchanger family ND05_RS14835 PF02080 TrkA-C domain ND05_RS14840 PF17676 LD-carboxypeptidase C-terminal domain ND05_RS14840 PF02016 LD-carboxypeptidase N-terminal domain ND05_RS14850 PF01464 Transglycosylase SLT domain ND05_RS14855 PF07238 PilZ domain ND05_RS14855 PF07317 Flagellar regulator YcgR ND05_RS14860 PF04226 Transglycosylase associated protein ND05_RS14870 PF01204 Trehalase ND05_RS14880 PF05524 PEP-utilising enzyme, N-terminal ND05_RS14880 PF00381 PTS HPr component phosphorylation site ND05_RS14880 PF00391 PEP-utilising enzyme, mobile domain ND05_RS14880 PF03610 PTS system fructose IIA component ND05_RS14885 PF02734 DAK2 domain ND05_RS14890 PF02733 Dak1 domain ND05_RS14895 PF02954 Bacterial regulatory protein, Fis family ND05_RS14895 PF00989 PAS fold ND05_RS14895 PF00158 Sigma-54 interaction domain ND05_RS14900 PF03797 Autotransporter beta-domain ND05_RS14900 PF03212 Pertactin ND05_RS14915 PF06071 Protein of unknown function (DUF933) ND05_RS14915 PF01926 50S ribosome-binding GTPase ND05_RS14920 PF01195 Peptidyl-tRNA hydrolase ND05_RS14925 PF10762 Protein of unknown function (DUF2583) ND05_RS14930 PF01740 STAS domain ND05_RS14930 PF00916 Sulfate permease family ND05_RS14940 PF14572 Phosphoribosyl synthetase-associated domain ND05_RS14940 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ND05_RS14950 PF00288 GHMP kinases N terminal domain ND05_RS14950 PF08544 GHMP kinases C terminal ND05_RS14955 PF03550 Outer membrane lipoprotein LolB ND05_RS14960 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ND05_RS14960 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ND05_RS14960 PF01488 Shikimate / quinate 5-dehydrogenase ND05_RS14965 PF03462 PCRF domain ND05_RS14965 PF00472 RF-1 domain ND05_RS14970 PF17827 PrmC N-terminal domain ND05_RS14970 PF13847 Methyltransferase domain ND05_RS14975 PF04247 Invasion gene expression up-regulator, SirB ND05_RS14980 PF13369 Transglutaminase-like superfamily ND05_RS14985 PF00793 DAHP synthetase I family ND05_RS14990 PF13940 Toxin Ldr, type I toxin-antitoxin system ND05_RS14995 PF13940 Toxin Ldr, type I toxin-antitoxin system ND05_RS15005 PF01699 Sodium/calcium exchanger protein ND05_RS15010 PF06150 ChaB ND05_RS15015 PF04752 ChaC-like protein ND05_RS15020 PF02635 DsrE/DsrF-like family ND05_RS15025 PF11924 Inverse autotransporter, beta-domain ND05_RS15030 PF00072 Response regulator receiver domain ND05_RS15030 PF00196 Bacterial regulatory proteins, luxR family ND05_RS15035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS15035 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ND05_RS15035 PF07730 Histidine kinase ND05_RS15035 PF00672 HAMP domain ND05_RS15045 PF07690 Major Facilitator Superfamily ND05_RS15050 PF00384 Molybdopterin oxidoreductase ND05_RS15050 PF14710 Respiratory nitrate reductase alpha N-terminal ND05_RS15050 PF01568 Molydopterin dinucleotide binding domain ND05_RS15055 PF14711 Respiratory nitrate reductase beta C-terminal ND05_RS15055 PF13247 4Fe-4S dicluster domain ND05_RS15060 PF02613 Nitrate reductase delta subunit ND05_RS15065 PF02665 Nitrate reductase gamma subunit ND05_RS15085 PF01842 ACT domain ND05_RS15085 PF00551 Formyl transferase ND05_RS15090 PF02810 SEC-C motif ND05_RS15095 PF01734 Patatin-like phospholipase ND05_RS15100 PF00072 Response regulator receiver domain ND05_RS15105 PF00483 Nucleotidyl transferase ND05_RS15110 PF00816 H-NS histone family ND05_RS15115 PF00265 Thymidine kinase ND05_RS15120 PF00171 Aldehyde dehydrogenase family ND05_RS15120 PF00465 Iron-containing alcohol dehydrogenase ND05_RS15125 PF01914 MarC family integral membrane protein ND05_RS15135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND05_RS15140 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS15145 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS15145 PF12911 N-terminal TM domain of oligopeptide transport permease C ND05_RS15150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND05_RS15150 PF00005 ABC transporter ND05_RS15155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND05_RS15155 PF00005 ABC transporter ND05_RS15160 PF04269 Protein of unknown function, DUF440 ND05_RS15165 PF13396 Phospholipase_D-nuclease N-terminal ND05_RS15165 PF13091 PLD-like domain ND05_RS15175 PF07885 Ion channel ND05_RS15175 PF02254 TrkA-N domain ND05_RS15180 PF03795 YCII-related domain ND05_RS15185 PF03544 Gram-negative bacterial TonB protein C-terminal ND05_RS15190 PF03061 Thioesterase superfamily ND05_RS15195 PF04279 Intracellular septation protein A ND05_RS15210 PF03922 OmpW family ND05_RS15230 PF07358 Protein of unknown function (DUF1482) ND05_RS15235 PF05358 DicB protein ND05_RS15270 PF01381 Helix-turn-helix ND05_RS15290 PF07789 Protein of unknown function (DUF1627) ND05_RS15310 PF01848 Hok/gef family ND05_RS15325 PF06147 Protein of unknown function (DUF968) ND05_RS15385 PF16809 NleF caspase inhibitor ND05_RS15440 PF05974 Domain of unknown function (DUF892) ND05_RS15445 PF05974 Domain of unknown function (DUF892) ND05_RS15450 PF10685 Stress-induced bacterial acidophilic repeat motif ND05_RS15455 PF00290 Tryptophan synthase alpha chain ND05_RS15460 PF00291 Pyridoxal-phosphate dependent enzyme ND05_RS15465 PF00218 Indole-3-glycerol phosphate synthase ND05_RS15465 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ND05_RS15470 PF00117 Glutamine amidotransferase class-I ND05_RS15470 PF02885 Glycosyl transferase family, helical bundle domain ND05_RS15470 PF00591 Glycosyl transferase family, a/b domain ND05_RS15475 PF00425 chorismate binding enzyme ND05_RS15475 PF04715 Anthranilate synthase component I, N terminal region ND05_RS15485 PF02811 PHP domain ND05_RS15490 PF01300 Telomere recombination ND05_RS15495 PF00849 RNA pseudouridylate synthase ND05_RS15495 PF01479 S4 domain ND05_RS15500 PF12557 Cob(I)alamin adenosyltransferase N terminal ND05_RS15500 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ND05_RS15505 PF00106 short chain dehydrogenase ND05_RS15510 PF08496 Peptidase family S49 N-terminal ND05_RS15510 PF01343 Peptidase family S49 ND05_RS15515 PF10692 Protein of unknown function (DUF2498) ND05_RS15525 PF01131 DNA topoisomerase ND05_RS15525 PF01751 Toprim domain ND05_RS15525 PF01396 Topoisomerase DNA binding C4 zinc finger ND05_RS15525 PF08272 Topoisomerase I zinc-ribbon-like ND05_RS15535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS15535 PF03466 LysR substrate binding domain ND05_RS15555 PF00694 Aconitase C-terminal domain ND05_RS15555 PF00330 Aconitase family (aconitate hydratase) ND05_RS15560 PF00925 GTP cyclohydrolase II ND05_RS15565 PF01569 PAP2 superfamily ND05_RS15570 PF06305 Lipopolysaccharide assembly protein A domain ND05_RS15575 PF18073 Rubredoxin metal binding domain ND05_RS15580 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ND05_RS15585 PF01253 Translation initiation factor SUI1 ND05_RS15590 PF05433 Glycine zipper 2TM domain ND05_RS15595 PF00455 DeoR C terminal sensor domain ND05_RS15595 PF08220 DeoR-like helix-turn-helix domain ND05_RS15605 PF00990 Diguanylate cyclase, GGDEF domain ND05_RS15605 PF00563 EAL domain ND05_RS15605 PF13426 PAS domain ND05_RS15615 PF17876 Cold shock domain ND05_RS15615 PF08206 Ribonuclease B OB domain ND05_RS15615 PF00773 RNB domain ND05_RS15615 PF00575 S1 RNA binding domain ND05_RS15630 PF04480 Protein of unknown function (DUF559) ND05_RS15635 PF00005 ABC transporter ND05_RS15640 PF00005 ABC transporter ND05_RS15640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND05_RS15645 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS15645 PF12911 N-terminal TM domain of oligopeptide transport permease C ND05_RS15650 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS15665 PF10820 Protein of unknown function (DUF2543) ND05_RS15670 PF00324 Amino acid permease ND05_RS15675 PF00120 Glutamine synthetase, catalytic domain ND05_RS15680 PF07722 Peptidase C26 ND05_RS15685 PF01381 Helix-turn-helix ND05_RS15685 PF07883 Cupin domain ND05_RS15695 PF00171 Aldehyde dehydrogenase family ND05_RS15700 PF01266 FAD dependent oxidoreductase ND05_RS15705 PF00202 Aminotransferase class-III ND05_RS15710 PF00158 Sigma-54 interaction domain ND05_RS15710 PF02954 Bacterial regulatory protein, Fis family ND05_RS15715 PF04012 PspA/IM30 family ND05_RS15720 PF06667 Phage shock protein B ND05_RS15725 PF04024 PspC domain ND05_RS15730 PF09584 Phage shock protein PspD (Phageshock_PspD) ND05_RS15735 PF00581 Rhodanese-like domain ND05_RS15740 PF00128 Alpha amylase, catalytic domain ND05_RS15750 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS15755 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS15760 PF00107 Zinc-binding dehydrogenase ND05_RS15765 PF01261 Xylose isomerase-like TIM barrel ND05_RS15770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ND05_RS15770 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ND05_RS15775 PF03636 Glycosyl hydrolase family 65, N-terminal domain ND05_RS15775 PF03633 Glycosyl hydrolase family 65, C-terminal domain ND05_RS15775 PF03632 Glycosyl hydrolase family 65 central catalytic domain ND05_RS15780 PF13419 Haloacid dehalogenase-like hydrolase ND05_RS15785 PF03459 TOBE domain ND05_RS15785 PF17912 MalK OB fold domain ND05_RS15785 PF00005 ABC transporter ND05_RS15790 PF09381 Outer membrane protein G (OmpG) ND05_RS15795 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND05_RS15795 PF00356 Bacterial regulatory proteins, lacI family ND05_RS15800 PF04317 YcjX-like family, DUF463 ND05_RS15805 PF05128 Domain of unknown function (DUF697) ND05_RS15810 PF00158 Sigma-54 interaction domain ND05_RS15810 PF18024 Helix-turn-helix domain ND05_RS15810 PF13188 PAS domain ND05_RS15815 PF08534 Redoxin ND05_RS15820 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ND05_RS15820 PF13378 Enolase C-terminal domain-like ND05_RS15825 PF00246 Zinc carboxypeptidase ND05_RS15835 PF12146 Serine aminopeptidase, S33 ND05_RS15840 PF12146 Serine aminopeptidase, S33 ND05_RS15845 PF03466 LysR substrate binding domain ND05_RS15845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS15850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND05_RS15855 PF00924 Mechanosensitive ion channel ND05_RS15860 PF10749 Protein of unknown function (DUF2534) ND05_RS15865 PF00582 Universal stress protein family ND05_RS15870 PF00325 Bacterial regulatory proteins, crp family ND05_RS15870 PF00027 Cyclic nucleotide-binding domain ND05_RS15875 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ND05_RS15875 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ND05_RS15880 PF03806 AbgT putative transporter family ND05_RS15890 PF01546 Peptidase family M20/M25/M40 ND05_RS15895 PF01546 Peptidase family M20/M25/M40 ND05_RS15895 PF07687 Peptidase dimerisation domain ND05_RS15900 PF03466 LysR substrate binding domain ND05_RS15900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS15910 PF01713 Smr domain ND05_RS15915 PF00990 Diguanylate cyclase, GGDEF domain ND05_RS15915 PF08448 PAS fold ND05_RS15920 PF01544 CorA-like Mg2+ transporter protein ND05_RS15930 PF00271 Helicase conserved C-terminal domain ND05_RS15930 PF03880 DbpA RNA binding domain ND05_RS15930 PF00270 DEAD/DEAH box helicase ND05_RS15935 PF01171 PP-loop family ND05_RS15940 PF12167 Arm DNA-binding domain ND05_RS15940 PF00589 Phage integrase family ND05_RS15945 PF06806 Putative excisionase (DUF1233) ND05_RS15950 PF06688 Protein of unknown function (DUF1187) ND05_RS15960 PF03837 RecT family ND05_RS15965 PF06630 Enterobacterial exodeoxyribonuclease VIII ND05_RS15965 PF12684 PDDEXK-like domain of unknown function (DUF3799) ND05_RS15970 PF04181 Rtr1/RPAP2 family ND05_RS15980 PF07151 Protein of unknown function (DUF1391) ND05_RS16000 PF06254 Putative bacterial toxin ydaT ND05_RS16005 PF07120 Protein of unknown function (DUF1376) ND05_RS16010 PF01695 IstB-like ATP binding protein ND05_RS16015 PF07789 Protein of unknown function (DUF1627) ND05_RS16045 PF01848 Hok/gef family ND05_RS16065 PF07102 Protein of unknown function (DUF1364) ND05_RS16095 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ND05_RS16110 PF04971 Bacteriophage P21 holin S ND05_RS16115 PF00959 Phage lysozyme ND05_RS16125 PF03245 Bacteriophage Rz lysis protein ND05_RS16155 PF00574 Clp protease ND05_RS16225 PF06316 Enterobacterial Ail/Lom protein ND05_RS16230 PF08400 Prophage tail fibre N-terminal ND05_RS16230 PF07484 Phage Tail Collar Domain ND05_RS16230 PF03335 Phage tail fibre repeat ND05_RS16255 PF00582 Universal stress protein family ND05_RS16260 PF00267 Gram-negative porin ND05_RS16265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND05_RS16265 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ND05_RS16265 PF10371 Domain of unknown function ND05_RS16265 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ND05_RS16265 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ND05_RS16270 PF03891 Domain of unknown function (DUF333) ND05_RS16275 PF03724 META domain ND05_RS16280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ND05_RS16280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND05_RS16285 PF11739 Dicarboxylate transport ND05_RS16290 PF13617 YnbE-like lipoprotein ND05_RS16295 PF07027 Protein of unknown function (DUF1318) ND05_RS16300 PF14525 AraC-binding-like domain ND05_RS16300 PF12833 Helix-turn-helix domain ND05_RS16305 PF00171 Aldehyde dehydrogenase family ND05_RS16310 PF01179 Copper amine oxidase, enzyme domain ND05_RS16310 PF02727 Copper amine oxidase, N2 domain ND05_RS16310 PF02728 Copper amine oxidase, N3 domain ND05_RS16310 PF07833 Copper amine oxidase N-terminal domain ND05_RS16315 PF01575 MaoC like domain ND05_RS16315 PF00171 Aldehyde dehydrogenase family ND05_RS16320 PF05138 Phenylacetic acid catabolic protein ND05_RS16325 PF06243 Phenylacetic acid degradation B ND05_RS16330 PF05138 Phenylacetic acid catabolic protein ND05_RS16335 PF01883 Iron-sulfur cluster assembly protein ND05_RS16340 PF00111 2Fe-2S iron-sulfur cluster binding domain ND05_RS16340 PF00175 Oxidoreductase NAD-binding domain ND05_RS16340 PF00970 Oxidoreductase FAD-binding domain ND05_RS16345 PF00378 Enoyl-CoA hydratase/isomerase ND05_RS16350 PF00378 Enoyl-CoA hydratase/isomerase ND05_RS16355 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ND05_RS16355 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ND05_RS16355 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ND05_RS16360 PF03061 Thioesterase superfamily ND05_RS16365 PF00108 Thiolase, N-terminal domain ND05_RS16365 PF02803 Thiolase, C-terminal domain ND05_RS16370 PF00501 AMP-binding enzyme ND05_RS16370 PF14535 AMP-binding enzyme C-terminal domain ND05_RS16375 PF08223 PaaX-like protein C-terminal domain ND05_RS16375 PF07848 PaaX-like protein ND05_RS16380 PF00132 Bacterial transferase hexapeptide (six repeats) ND05_RS16400 PF01066 CDP-alcohol phosphatidyltransferase ND05_RS16415 PF00782 Dual specificity phosphatase, catalytic domain ND05_RS16420 PF02525 Flavodoxin-like fold ND05_RS16425 PF11898 Domain of unknown function (DUF3418) ND05_RS16425 PF04408 Helicase associated domain (HA2) ND05_RS16425 PF00270 DEAD/DEAH box helicase ND05_RS16425 PF00271 Helicase conserved C-terminal domain ND05_RS16425 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ND05_RS16430 PF02698 DUF218 domain ND05_RS16435 PF00171 Aldehyde dehydrogenase family ND05_RS16440 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ND05_RS16440 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ND05_RS16445 PF01292 Prokaryotic cytochrome b561 ND05_RS16455 PF01848 Hok/gef family ND05_RS16460 PF02203 Tar ligand binding domain homologue ND05_RS16460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND05_RS16460 PF00672 HAMP domain ND05_RS16465 PF03466 LysR substrate binding domain ND05_RS16465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS16470 PF07063 Domain of unknown function (DUF1338) ND05_RS16480 PF04349 Periplasmic glucan biosynthesis protein, MdoG ND05_RS16490 PF04325 Protein of unknown function (DUF465) ND05_RS16495 PF13302 Acetyltransferase (GNAT) domain ND05_RS16500 PF18836 Beta solenoid repeat from YDCK ND05_RS16505 PF03595 Voltage-dependent anion channel ND05_RS16510 PF03848 Tellurite resistance protein TehB ND05_RS16515 PF11769 Protein of unknown function (DUF3313) ND05_RS16530 PF12323 Helix-turn-helix domain ND05_RS16530 PF01385 Probable transposase ND05_RS16530 PF07282 Putative transposase DNA-binding domain ND05_RS16535 PF03594 Benzoate membrane transport protein ND05_RS16540 PF01381 Helix-turn-helix ND05_RS16540 PF07883 Cupin domain ND05_RS16545 PF12392 Collagenase ND05_RS16545 PF01136 Peptidase family U32 ND05_RS16550 PF10829 Protein of unknown function (DUF2554) ND05_RS16555 PF07927 HicA toxin of bacterial toxin-antitoxin, ND05_RS16560 PF01381 Helix-turn-helix ND05_RS16560 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system ND05_RS16565 PF00155 Aminotransferase class I and II ND05_RS16565 PF00392 Bacterial regulatory proteins, gntR family ND05_RS16570 PF13416 Bacterial extracellular solute-binding protein ND05_RS16575 PF00005 ABC transporter ND05_RS16575 PF08402 TOBE domain ND05_RS16580 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS16585 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS16590 PF00171 Aldehyde dehydrogenase family ND05_RS16610 PF10753 Toxin GhoT_OrtT ND05_RS16615 PF10735 Protein of unknown function (DUF2526) ND05_RS16620 PF04657 Putative inner membrane exporter, YdcZ ND05_RS16625 PF00583 Acetyltransferase (GNAT) family ND05_RS16635 PF16884 N-terminal domain of oxidoreductase ND05_RS16635 PF00107 Zinc-binding dehydrogenase ND05_RS16640 PF00392 Bacterial regulatory proteins, gntR family ND05_RS16640 PF07729 FCD domain ND05_RS16645 PF00593 TonB dependent receptor ND05_RS16645 PF07715 TonB-dependent Receptor Plug Domain ND05_RS16665 PF13417 Glutathione S-transferase, N-terminal domain ND05_RS16670 PF17520 Family of unknown function (DUF5445) ND05_RS16675 PF04717 Type VI secretion system, phage-baseplate injector ND05_RS16690 PF13808 DDE_Tnp_1-associated ND05_RS16690 PF01609 Transposase DDE domain ND05_RS16695 PF01609 Transposase DDE domain ND05_RS16695 PF13808 DDE_Tnp_1-associated ND05_RS16700 PF01361 Tautomerase enzyme ND05_RS16705 PF01613 Flavin reductase like domain ND05_RS16710 PF00797 N-acetyltransferase ND05_RS16715 PF02567 Phenazine biosynthesis-like protein ND05_RS16720 PF02665 Nitrate reductase gamma subunit ND05_RS16725 PF02613 Nitrate reductase delta subunit ND05_RS16730 PF13247 4Fe-4S dicluster domain ND05_RS16730 PF14711 Respiratory nitrate reductase beta C-terminal ND05_RS16735 PF01568 Molydopterin dinucleotide binding domain ND05_RS16735 PF00384 Molybdopterin oxidoreductase ND05_RS16735 PF14710 Respiratory nitrate reductase alpha N-terminal ND05_RS16740 PF07690 Major Facilitator Superfamily ND05_RS16750 PF00267 Gram-negative porin ND05_RS16755 PF00892 EamA-like transporter family ND05_RS16760 PF00384 Molybdopterin oxidoreductase ND05_RS16760 PF01568 Molydopterin dinucleotide binding domain ND05_RS16760 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND05_RS16765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND05_RS16765 PF01568 Molydopterin dinucleotide binding domain ND05_RS16765 PF00384 Molybdopterin oxidoreductase ND05_RS16770 PF13247 4Fe-4S dicluster domain ND05_RS16770 PF12800 4Fe-4S binding domain ND05_RS16770 PF09163 Formate dehydrogenase N, transmembrane ND05_RS16775 PF01292 Prokaryotic cytochrome b561 ND05_RS16780 PF01381 Helix-turn-helix ND05_RS16785 PF00107 Zinc-binding dehydrogenase ND05_RS16785 PF08240 Alcohol dehydrogenase GroES-like domain ND05_RS16790 PF00390 Malic enzyme, N-terminal domain ND05_RS16790 PF03949 Malic enzyme, NAD binding domain ND05_RS16795 PF08136 30S ribosomal protein subunit S22 family ND05_RS16800 PF10684 Putative biofilm-dependent modulation protein ND05_RS16810 PF02566 OsmC-like protein ND05_RS16815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND05_RS16815 PF00005 ABC transporter ND05_RS16820 PF00005 ABC transporter ND05_RS16820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND05_RS16825 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS16825 PF12911 N-terminal TM domain of oligopeptide transport permease C ND05_RS16830 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS16835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND05_RS16840 PF01427 D-ala-D-ala dipeptidase ND05_RS16845 PF13426 PAS domain ND05_RS16845 PF00990 Diguanylate cyclase, GGDEF domain ND05_RS16845 PF00563 EAL domain ND05_RS16850 PF00990 Diguanylate cyclase, GGDEF domain ND05_RS16855 PF02638 Glycosyl hydrolase-like 10 ND05_RS16860 PF13520 Amino acid permease ND05_RS16865 PF00282 Pyridoxal-dependent decarboxylase conserved domain ND05_RS16870 PF05193 Peptidase M16 inactive domain ND05_RS16870 PF00675 Insulinase (Peptidase family M16) ND05_RS16875 PF07715 TonB-dependent Receptor Plug Domain ND05_RS16880 PF00005 ABC transporter ND05_RS16880 PF06472 ABC transporter transmembrane region 2 ND05_RS16885 PF13186 Iron-sulfur cluster-binding domain ND05_RS16885 PF04055 Radical SAM superfamily ND05_RS16895 PF12833 Helix-turn-helix domain ND05_RS16900 PF17073 Two-component-system connector protein ND05_RS16905 PF00384 Molybdopterin oxidoreductase ND05_RS16910 PF09160 FimH, mannose binding ND05_RS16915 PF00419 Fimbrial protein ND05_RS16920 PF00419 Fimbrial protein ND05_RS16925 PF00577 Outer membrane usher protein ND05_RS16925 PF13954 PapC N-terminal domain ND05_RS16925 PF13953 PapC C-terminal domain ND05_RS16930 PF02753 Pili assembly chaperone PapD, C-terminal domain ND05_RS16930 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND05_RS16935 PF00419 Fimbrial protein ND05_RS16950 PF07804 HipA-like C-terminal domain ND05_RS16950 PF13657 HipA N-terminal domain ND05_RS16955 PF01381 Helix-turn-helix ND05_RS16960 PF03797 Autotransporter beta-domain ND05_RS16965 PF13018 Extended Signal Peptide of Type V secretion system ND05_RS16970 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ND05_RS16970 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ND05_RS16975 PF04198 Putative sugar-binding domain ND05_RS16980 PF00005 ABC transporter ND05_RS16985 PF02653 Branched-chain amino acid transport system / permease component ND05_RS16990 PF02653 Branched-chain amino acid transport system / permease component ND05_RS16995 PF13407 Periplasmic binding protein domain ND05_RS17000 PF01791 DeoC/LacD family aldolase ND05_RS17005 PF03992 Antibiotic biosynthesis monooxygenase ND05_RS17010 PF13649 Methyltransferase domain ND05_RS17015 PF01062 Bestrophin, RFP-TM, chloride channel ND05_RS17025 PF08125 Mannitol dehydrogenase C-terminal domain ND05_RS17025 PF01232 Mannitol dehydrogenase Rossmann domain ND05_RS17035 PF00990 Diguanylate cyclase, GGDEF domain ND05_RS17045 PF13811 Domain of unknown function (DUF4186) ND05_RS17050 PF04960 Glutaminase ND05_RS17055 PF00171 Aldehyde dehydrogenase family ND05_RS17060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS17060 PF03466 LysR substrate binding domain ND05_RS17070 PF07690 Major Facilitator Superfamily ND05_RS17075 PF01914 MarC family integral membrane protein ND05_RS17080 PF01047 MarR family ND05_RS17085 PF12833 Helix-turn-helix domain ND05_RS17090 PF13999 MarB protein ND05_RS17110 PF11471 Maltoporin periplasmic N-terminal extension ND05_RS17110 PF02264 LamB porin ND05_RS17115 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ND05_RS17120 PF02378 Phosphotransferase system, EIIC ND05_RS17125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND05_RS17130 PF07702 UTRA domain ND05_RS17130 PF00392 Bacterial regulatory proteins, gntR family ND05_RS17135 PF00892 EamA-like transporter family ND05_RS17140 PF07690 Major Facilitator Superfamily ND05_RS17150 PF00990 Diguanylate cyclase, GGDEF domain ND05_RS17165 PF04076 Bacterial OB fold (BOF) protein ND05_RS17170 PF02464 Competence-damaged protein ND05_RS17175 PF01432 Peptidase family M3 ND05_RS17185 PF00106 short chain dehydrogenase ND05_RS17190 PF07729 FCD domain ND05_RS17190 PF00392 Bacterial regulatory proteins, gntR family ND05_RS17195 PF14001 YdfZ protein ND05_RS17205 PF07690 Major Facilitator Superfamily ND05_RS17205 PF00083 Sugar (and other) transporter ND05_RS17210 PF06183 DinI-like family ND05_RS17235 PF03335 Phage tail fibre repeat ND05_RS17235 PF08400 Prophage tail fibre N-terminal ND05_RS17235 PF07484 Phage Tail Collar Domain ND05_RS17240 PF06316 Enterobacterial Ail/Lom protein ND05_RS17310 PF03864 Phage major capsid protein E ND05_RS17320 PF01972 Serine dehydrogenase proteinase ND05_RS17320 PF01957 NfeD-like C-terminal, partner-binding ND05_RS17330 PF02831 gpW ND05_RS17335 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND05_RS17340 PF07471 Phage DNA packaging protein Nu1 ND05_RS17350 PF13132 Domain of unknown function (DUF3950) ND05_RS17355 PF06069 PerC transcriptional activator ND05_RS17365 PF03245 Bacteriophage Rz lysis protein ND05_RS17375 PF00959 Phage lysozyme ND05_RS17380 PF07041 Protein of unknown function (DUF1327) ND05_RS17385 PF04971 Bacteriophage P21 holin S ND05_RS17395 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ND05_RS17425 PF12833 Helix-turn-helix domain ND05_RS17440 PF05866 Endodeoxyribonuclease RusA ND05_RS17445 PF06147 Protein of unknown function (DUF968) ND05_RS17455 PF04076 Bacterial OB fold (BOF) protein ND05_RS17460 PF01848 Hok/gef family ND05_RS17490 PF07789 Protein of unknown function (DUF1627) ND05_RS17525 PF07151 Protein of unknown function (DUF1391) ND05_RS17545 PF05358 DicB protein ND05_RS17550 PF07358 Protein of unknown function (DUF1482) ND05_RS17555 PF06630 Enterobacterial exodeoxyribonuclease VIII ND05_RS17555 PF12684 PDDEXK-like domain of unknown function (DUF3799) ND05_RS17575 PF00239 Resolvase, N terminal domain ND05_RS17575 PF02796 Helix-turn-helix domain of resolvase ND05_RS17600 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND05_RS17605 PF03335 Phage tail fibre repeat ND05_RS17605 PF07484 Phage Tail Collar Domain ND05_RS17610 PF06316 Enterobacterial Ail/Lom protein ND05_RS17710 PF00574 Clp protease ND05_RS17765 PF13356 Arm DNA-binding domain ND05_RS17765 PF00589 Phage integrase family ND05_RS17790 PF07166 Protein of unknown function (DUF1398) ND05_RS17795 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system ND05_RS17810 PF00313 'Cold-shock' DNA-binding domain ND05_RS17815 PF10721 Protein of unknown function (DUF2514) ND05_RS17820 PF00959 Phage lysozyme ND05_RS17830 PF04971 Bacteriophage P21 holin S ND05_RS17835 PF00313 'Cold-shock' DNA-binding domain ND05_RS17840 PF00313 'Cold-shock' DNA-binding domain ND05_RS17850 PF03589 Antitermination protein ND05_RS17855 PF06147 Protein of unknown function (DUF968) ND05_RS17885 PF13817 IS66 C-terminal element ND05_RS17885 PF03050 Transposase IS66 family ND05_RS17885 PF13005 zinc-finger binding domain of transposase IS66 ND05_RS17885 PF13007 Transposase C of IS166 homeodomain ND05_RS17890 PF05717 IS66 Orf2 like protein ND05_RS17895 PF03050 Transposase IS66 family ND05_RS17895 PF13817 IS66 C-terminal element ND05_RS17895 PF13005 zinc-finger binding domain of transposase IS66 ND05_RS17895 PF13007 Transposase C of IS166 homeodomain ND05_RS17900 PF05717 IS66 Orf2 like protein ND05_RS17910 PF08240 Alcohol dehydrogenase GroES-like domain ND05_RS17910 PF00107 Zinc-binding dehydrogenase ND05_RS17915 PF13378 Enolase C-terminal domain-like ND05_RS17915 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ND05_RS17925 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ND05_RS17930 PF06932 Protein of unknown function (DUF1283) ND05_RS17935 PF13302 Acetyltransferase (GNAT) domain ND05_RS17940 PF06788 Uncharacterised protein family (UPF0257) ND05_RS17945 PF06649 Protein of unknown function (DUF1161) ND05_RS17950 PF00384 Molybdopterin oxidoreductase ND05_RS17950 PF01568 Molydopterin dinucleotide binding domain ND05_RS17950 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND05_RS17955 PF01568 Molydopterin dinucleotide binding domain ND05_RS17955 PF00384 Molybdopterin oxidoreductase ND05_RS17955 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND05_RS17960 PF13247 4Fe-4S dicluster domain ND05_RS17960 PF12800 4Fe-4S binding domain ND05_RS17965 PF04976 DMSO reductase anchor subunit (DmsC) ND05_RS17970 PF02613 Nitrate reductase delta subunit ND05_RS17975 PF00654 Voltage gated chloride channel ND05_RS17985 PF00480 ROK family ND05_RS17990 PF03466 LysR substrate binding domain ND05_RS17990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS17995 PF07690 Major Facilitator Superfamily ND05_RS18015 PF00089 Trypsin ND05_RS18020 PF00893 Small Multidrug Resistance protein ND05_RS18025 PF00893 Small Multidrug Resistance protein ND05_RS18035 PF01594 AI-2E family transporter ND05_RS18040 PF02233 NAD(P) transhydrogenase beta subunit ND05_RS18045 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ND05_RS18045 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ND05_RS18045 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ND05_RS18050 PF07338 Protein of unknown function (DUF1471) ND05_RS18060 PF13520 Amino acid permease ND05_RS18070 PF06942 GlpM protein ND05_RS18075 PF00072 Response regulator receiver domain ND05_RS18075 PF00486 Transcriptional regulatory protein, C terminal ND05_RS18080 PF00672 HAMP domain ND05_RS18080 PF00512 His Kinase A (phospho-acceptor) domain ND05_RS18080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS18085 PF05472 DNA replication terminus site-binding protein (Ter protein) ND05_RS18090 PF00206 Lyase ND05_RS18090 PF10415 Fumarase C C-terminus ND05_RS18095 PF05681 Fumarate hydratase (Fumerase) ND05_RS18095 PF05683 Fumarase C-terminus ND05_RS18100 PF01238 Phosphomannose isomerase type I ND05_RS18105 PF06097 Bacterial protein of unknown function (DUF945) ND05_RS18110 PF03573 outer membrane porin, OprD family ND05_RS18120 PF00703 Glycosyl hydrolases family 2 ND05_RS18120 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ND05_RS18120 PF02837 Glycosyl hydrolases family 2, sugar binding domain ND05_RS18125 PF00440 Bacterial regulatory proteins, tetR family ND05_RS18135 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND05_RS18135 PF00356 Bacterial regulatory proteins, lacI family ND05_RS18140 PF00367 phosphotransferase system, EIIB ND05_RS18140 PF02378 Phosphotransferase system, EIIC ND05_RS18145 PF00155 Aminotransferase class I and II ND05_RS18150 PF00962 Adenosine/AMP deaminase ND05_RS18155 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ND05_RS18155 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ND05_RS18170 PF05321 Haemolysin expression modulating protein ND05_RS18175 PF10754 Protein of unknown function (DUF2569) ND05_RS18180 PF02508 Rnf-Nqr subunit, membrane protein ND05_RS18185 PF04060 Putative Fe-S cluster ND05_RS18190 PF10531 SLBB domain ND05_RS18190 PF13375 RnfC Barrel sandwich hybrid domain ND05_RS18190 PF12838 4Fe-4S dicluster domain ND05_RS18190 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ND05_RS18195 PF03116 NQR2, RnfD, RnfE family ND05_RS18200 PF04205 FMN-binding domain ND05_RS18205 PF02508 Rnf-Nqr subunit, membrane protein ND05_RS18210 PF10576 Iron-sulfur binding domain of endonuclease III ND05_RS18210 PF00730 HhH-GPD superfamily base excision DNA repair protein ND05_RS18210 PF00633 Helix-hairpin-helix motif ND05_RS18220 PF00854 POT family ND05_RS18225 PF02798 Glutathione S-transferase, N-terminal domain ND05_RS18225 PF00043 Glutathione S-transferase, C-terminal domain ND05_RS18230 PF08543 Phosphomethylpyrimidine kinase ND05_RS18235 PF00579 tRNA synthetases class I (W and Y) ND05_RS18235 PF01479 S4 domain ND05_RS18240 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ND05_RS18240 PF01243 Pyridoxamine 5'-phosphate oxidase ND05_RS18245 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme ND05_RS18250 PF03702 Anhydro-N-acetylmuramic acid kinase ND05_RS18255 PF05433 Glycine zipper 2TM domain ND05_RS18260 PF01047 MarR family ND05_RS18265 PF07869 Protein of unknown function (DUF1656) ND05_RS18270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND05_RS18270 PF00529 HlyD membrane-fusion protein of T1SS ND05_RS18280 PF00080 Copper/zinc superoxide dismutase (SODC) ND05_RS18285 PF00248 Aldo/keto reductase family ND05_RS18290 PF06945 Protein of unknown function (DUF1289) ND05_RS18295 PF00440 Bacterial regulatory proteins, tetR family ND05_RS18295 PF16925 Tetracyclin repressor-like, C-terminal domain ND05_RS18300 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ND05_RS18305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ND05_RS18310 PF00929 Exonuclease ND05_RS18315 PF08494 DEAD/H associated ND05_RS18315 PF00271 Helicase conserved C-terminal domain ND05_RS18315 PF00270 DEAD/DEAH box helicase ND05_RS18320 PF00462 Glutaredoxin ND05_RS18325 PF00877 NlpC/P60 family ND05_RS18330 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ND05_RS18330 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ND05_RS18335 PF07690 Major Facilitator Superfamily ND05_RS18350 PF00356 Bacterial regulatory proteins, lacI family ND05_RS18355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS18355 PF03466 LysR substrate binding domain ND05_RS18360 PF07690 Major Facilitator Superfamily ND05_RS18370 PF00677 Lumazine binding domain ND05_RS18375 PF01554 MatE ND05_RS18380 PF16168 Adhesin of bacterial autotransporter system, probable stalk ND05_RS18380 PF03212 Pertactin ND05_RS18395 PF08803 Putative mono-oxygenase ydhR ND05_RS18400 PF13454 FAD-NAD(P)-binding ND05_RS18410 PF01292 Prokaryotic cytochrome b561 ND05_RS18415 PF13247 4Fe-4S dicluster domain ND05_RS18425 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain ND05_RS18425 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 ND05_RS18430 PF13247 4Fe-4S dicluster domain ND05_RS18430 PF12800 4Fe-4S binding domain ND05_RS18435 PF10965 Protein of unknown function (DUF2767) ND05_RS18440 PF02887 Pyruvate kinase, alpha/beta domain ND05_RS18440 PF00224 Pyruvate kinase, barrel domain ND05_RS18445 PF04728 Lipoprotein leucine-zipper ND05_RS18450 PF17969 L,D-transpeptidase C-terminal domain ND05_RS18450 PF01476 LysM domain ND05_RS18450 PF03734 L,D-transpeptidase catalytic domain ND05_RS18455 PF02657 Fe-S metabolism associated domain ND05_RS18460 PF00266 Aminotransferase class-V ND05_RS18465 PF01458 Uncharacterized protein family (UPF0051) ND05_RS18470 PF00005 ABC transporter ND05_RS18480 PF01521 Iron-sulphur cluster biosynthesis ND05_RS18485 PF15930 Domain of unknown function ND05_RS18490 PF03061 Thioesterase superfamily ND05_RS18495 PF01565 FAD binding domain ND05_RS18495 PF13183 4Fe-4S dicluster domain ND05_RS18495 PF02913 FAD linked oxidases, C-terminal domain ND05_RS18505 PF01594 AI-2E family transporter ND05_RS18515 PF08965 Domain of unknown function (DUF1870) ND05_RS18520 PF07690 Major Facilitator Superfamily ND05_RS18530 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ND05_RS18530 PF08501 Shikimate dehydrogenase substrate binding domain ND05_RS18535 PF01487 Type I 3-dehydroquinase ND05_RS18540 PF01144 Coenzyme A transferase ND05_RS18545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ND05_RS18545 PF02770 Acyl-CoA dehydrogenase, middle domain ND05_RS18545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ND05_RS18550 PF12833 Helix-turn-helix domain ND05_RS18550 PF02311 AraC-like ligand binding domain ND05_RS18560 PF01012 Electron transfer flavoprotein domain ND05_RS18565 PF00766 Electron transfer flavoprotein FAD-binding domain ND05_RS18565 PF01012 Electron transfer flavoprotein domain ND05_RS18570 PF01494 FAD binding domain ND05_RS18580 PF00501 AMP-binding enzyme ND05_RS18580 PF13193 AMP-binding enzyme C-terminal domain ND05_RS18585 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ND05_RS18585 PF00391 PEP-utilising enzyme, mobile domain ND05_RS18585 PF02896 PEP-utilising enzyme, TIM barrel domain ND05_RS18595 PF03618 Kinase/pyrophosphorylase ND05_RS18600 PF00793 DAHP synthetase I family ND05_RS18605 PF10636 Hemin uptake protein hemP ND05_RS18610 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ND05_RS18615 PF00563 EAL domain ND05_RS18620 PF00877 NlpC/P60 family ND05_RS18625 PF00005 ABC transporter ND05_RS18630 PF00255 Glutathione peroxidase ND05_RS18635 PF01032 FecCD transport family ND05_RS18640 PF00216 Bacterial DNA-binding protein ND05_RS18645 PF03483 B3/4 domain ND05_RS18645 PF03484 tRNA synthetase B5 domain ND05_RS18645 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ND05_RS18645 PF03147 Ferredoxin-fold anticodon binding domain ND05_RS18645 PF01588 Putative tRNA binding domain ND05_RS18650 PF01409 tRNA synthetases class II core domain (F) ND05_RS18650 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ND05_RS18660 PF00453 Ribosomal protein L20 ND05_RS18665 PF01632 Ribosomal protein L35 ND05_RS18670 PF05198 Translation initiation factor IF-3, N-terminal domain ND05_RS18670 PF00707 Translation initiation factor IF-3, C-terminal domain ND05_RS18675 PF02824 TGS domain ND05_RS18675 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ND05_RS18675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ND05_RS18675 PF03129 Anticodon binding domain ND05_RS18690 PF04338 Protein of unknown function, DUF481 ND05_RS18695 PF00294 pfkB family carbohydrate kinase ND05_RS18700 PF11080 Endoribonuclease GhoS ND05_RS18705 PF03881 Fructosamine kinase ND05_RS18710 PF14002 YniB-like protein ND05_RS18715 PF13419 Haloacid dehalogenase-like hydrolase ND05_RS18720 PF04307 LexA-binding, inner membrane-associated putative hydrolase ND05_RS18725 PF00375 Sodium:dicarboxylate symporter family ND05_RS18735 PF10729 Cell division activator CedA ND05_RS18740 PF06628 Catalase-related immune-responsive ND05_RS18740 PF00199 Catalase ND05_RS18740 PF18011 C-terminal domain found in long catalases ND05_RS18745 PF04794 YdjC-like protein ND05_RS18750 PF11975 Family 4 glycosyl hydrolase C-terminal domain ND05_RS18750 PF02056 Family 4 glycosyl hydrolase ND05_RS18755 PF12833 Helix-turn-helix domain ND05_RS18755 PF07883 Cupin domain ND05_RS18760 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ND05_RS18765 PF02378 Phosphotransferase system, EIIC ND05_RS18770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND05_RS18780 PF04355 SmpA / OmlA family ND05_RS18785 PF02540 NAD synthase ND05_RS18795 PF05962 HutD ND05_RS18800 PF07813 LTXXQ motif family protein ND05_RS18805 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ND05_RS18810 PF04996 Succinylarginine dihydrolase ND05_RS18815 PF00171 Aldehyde dehydrogenase family ND05_RS18820 PF04958 Arginine N-succinyltransferase beta subunit ND05_RS18825 PF00202 Aminotransferase class-III ND05_RS18835 PF03372 Endonuclease/Exonuclease/phosphatase family ND05_RS18840 PF09335 SNARE associated Golgi protein ND05_RS18850 PF09335 SNARE associated Golgi protein ND05_RS18855 PF02627 Carboxymuconolactone decarboxylase family ND05_RS18860 PF13416 Bacterial extracellular solute-binding protein ND05_RS18865 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS18870 PF00005 ABC transporter ND05_RS18875 PF00581 Rhodanese-like domain ND05_RS18880 PF01066 CDP-alcohol phosphatidyltransferase ND05_RS18885 PF00293 NUDIX domain ND05_RS18890 PF07383 Protein of unknown function (DUF1496) ND05_RS18895 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ND05_RS18895 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ND05_RS18900 PF06889 Protein of unknown function (DUF1266) ND05_RS18905 PF01751 Toprim domain ND05_RS18905 PF01131 DNA topoisomerase ND05_RS18910 PF00586 AIR synthase related protein, N-terminal domain ND05_RS18910 PF02769 AIR synthase related protein, C-terminal domain ND05_RS18920 PF00881 Nitroreductase family ND05_RS18930 PF01343 Peptidase family S49 ND05_RS18935 PF00710 Asparaginase, N-terminal ND05_RS18935 PF17763 Glutaminase/Asparaginase C-terminal domain ND05_RS18940 PF00857 Isochorismatase family ND05_RS18945 PF00083 Sugar (and other) transporter ND05_RS18950 PF08220 DeoR-like helix-turn-helix domain ND05_RS18950 PF00455 DeoR C terminal sensor domain ND05_RS18955 PF00248 Aldo/keto reductase family ND05_RS18960 PF00294 pfkB family carbohydrate kinase ND05_RS18965 PF01116 Fructose-bisphosphate aldolase class-II ND05_RS18970 PF08240 Alcohol dehydrogenase GroES-like domain ND05_RS18970 PF00107 Zinc-binding dehydrogenase ND05_RS18975 PF00083 Sugar (and other) transporter ND05_RS18980 PF00107 Zinc-binding dehydrogenase ND05_RS18980 PF08240 Alcohol dehydrogenase GroES-like domain ND05_RS18985 PF07023 Protein of unknown function (DUF1315) ND05_RS18990 PF01641 SelR domain ND05_RS18995 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ND05_RS18995 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ND05_RS19000 PF01263 Aldose 1-epimerase ND05_RS19005 PF00248 Aldo/keto reductase family ND05_RS19010 PF06629 MltA-interacting protein MipA ND05_RS19015 PF06798 PrkA serine protein kinase C-terminal domain ND05_RS19015 PF08298 PrkA AAA domain ND05_RS19020 PF04285 Protein of unknown function (DUF444) ND05_RS19025 PF00990 Diguanylate cyclase, GGDEF domain ND05_RS19025 PF17158 Membrane-associated sensor, integral membrane domain ND05_RS19030 PF17155 Gammaproteobacterial periplasmic sensor domain ND05_RS19030 PF00990 Diguanylate cyclase, GGDEF domain ND05_RS19035 PF04073 Aminoacyl-tRNA editing domain ND05_RS19045 PF04284 Protein of unknown function (DUF441) ND05_RS19050 PF12833 Helix-turn-helix domain ND05_RS19050 PF02311 AraC-like ligand binding domain ND05_RS19055 PF07690 Major Facilitator Superfamily ND05_RS19065 PF03891 Domain of unknown function (DUF333) ND05_RS19070 PF13185 GAF domain ND05_RS19070 PF00990 Diguanylate cyclase, GGDEF domain ND05_RS19085 PF04226 Transglycosylase associated protein ND05_RS19090 PF08956 Domain of unknown function (DUF1869) ND05_RS19095 PF09313 Domain of unknown function (DUF1971) ND05_RS19100 PF01810 LysE type translocator ND05_RS19105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS19105 PF03466 LysR substrate binding domain ND05_RS19110 PF00180 Isocitrate/isopropylmalate dehydrogenase ND05_RS19115 PF02028 BCCT, betaine/carnitine/choline family transporter ND05_RS19120 PF00355 Rieske [2Fe-2S] domain ND05_RS19120 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ND05_RS19125 PF00970 Oxidoreductase FAD-binding domain ND05_RS19125 PF00111 2Fe-2S iron-sulfur cluster binding domain ND05_RS19125 PF00175 Oxidoreductase NAD-binding domain ND05_RS19130 PF01612 3'-5' exonuclease ND05_RS19130 PF00570 HRDC domain ND05_RS19135 PF00501 AMP-binding enzyme ND05_RS19135 PF13193 AMP-binding enzyme C-terminal domain ND05_RS19140 PF03843 Outer membrane lipoprotein Slp family ND05_RS19145 PF00814 Glycoprotease family ND05_RS19150 PF13307 Helicase C-terminal domain ND05_RS19150 PF04851 Type III restriction enzyme, res subunit ND05_RS19155 PF01042 Endoribonuclease L-PSP ND05_RS19160 PF08986 Domain of unknown function (DUF1889) ND05_RS19165 PF03701 Uncharacterised protein family (UPF0181) ND05_RS19170 PF04715 Anthranilate synthase component I, N terminal region ND05_RS19170 PF00425 chorismate binding enzyme ND05_RS19175 PF00293 NUDIX domain ND05_RS19180 PF03313 Serine dehydratase alpha chain ND05_RS19180 PF03315 Serine dehydratase beta chain ND05_RS19205 PF03830 PTS system sorbose subfamily IIB component ND05_RS19205 PF03610 PTS system fructose IIA component ND05_RS19210 PF03609 PTS system sorbose-specific iic component ND05_RS19215 PF03613 PTS system mannose/fructose/sorbose family IID component ND05_RS19220 PF06173 Protein of unknown function (DUF986) ND05_RS19230 PF02659 Putative manganese efflux pump ND05_RS19240 PF00313 'Cold-shock' DNA-binding domain ND05_RS19245 PF10736 Protein of unknown function (DUF2627) ND05_RS19255 PF13974 YebO-like protein ND05_RS19260 PF13998 MgrB protein ND05_RS19265 PF13996 YobH-like protein ND05_RS19270 PF09339 IclR helix-turn-helix domain ND05_RS19270 PF01614 Bacterial transcriptional regulator ND05_RS19275 PF07690 Major Facilitator Superfamily ND05_RS19280 PF01435 Peptidase family M48 ND05_RS19285 PF17804 Tail specific protease N-terminal domain ND05_RS19285 PF03572 Peptidase family S41 ND05_RS19285 PF00595 PDZ domain ND05_RS19285 PF11818 C-terminal domain of tail specific protease (DUF3340) ND05_RS19290 PF04352 ProQ/FINO family ND05_RS19290 PF17516 ProQ C-terminal domain ND05_RS19295 PF13185 GAF domain ND05_RS19300 PF04403 Paraquat-inducible protein A ND05_RS19305 PF02470 MlaD protein ND05_RS19310 PF01189 16S rRNA methyltransferase RsmB/F ND05_RS19310 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF ND05_RS19310 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF ND05_RS19315 PF07351 Protein of unknown function (DUF1480) ND05_RS19320 PF07358 Protein of unknown function (DUF1482) ND05_RS19325 PF00149 Calcineurin-like phosphoesterase ND05_RS19330 PF10709 Protein of unknown function (DUF2511) ND05_RS19335 PF05425 Copper resistance protein D ND05_RS19340 PF04234 CopC domain ND05_RS19345 PF06440 DNA polymerase III, theta subunit ND05_RS19350 PF00795 Carbon-nitrogen hydrolase ND05_RS19355 PF00929 Exonuclease ND05_RS19360 PF00326 Prolyl oligopeptidase family ND05_RS19360 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ND05_RS19365 PF04391 Protein of unknown function (DUF533) ND05_RS19370 PF13995 YebF-like protein ND05_RS19375 PF07130 YebG protein ND05_RS19380 PF02222 ATP-grasp domain ND05_RS19385 PF01081 KDPG and KHG aldolase ND05_RS19390 PF00920 Dehydratase family ND05_RS19395 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ND05_RS19395 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ND05_RS19400 PF01418 Helix-turn-helix domain, rpiR family ND05_RS19400 PF01380 SIS domain ND05_RS19405 PF02887 Pyruvate kinase, alpha/beta domain ND05_RS19405 PF00224 Pyruvate kinase, barrel domain ND05_RS19410 PF03279 Bacterial lipid A biosynthesis acyltransferase ND05_RS19420 PF01297 Zinc-uptake complex component A periplasmic ND05_RS19425 PF00005 ABC transporter ND05_RS19430 PF00950 ABC 3 transport family ND05_RS19435 PF05491 RuvB C-terminal winged helix domain ND05_RS19435 PF17864 RuvB AAA lid domain ND05_RS19435 PF05496 Holliday junction DNA helicase RuvB P-loop domain ND05_RS19440 PF01330 RuvA N terminal domain ND05_RS19440 PF07499 RuvA, C-terminal domain ND05_RS19450 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ND05_RS19455 PF02075 Crossover junction endodeoxyribonuclease RuvC ND05_RS19460 PF01709 Transcriptional regulator ND05_RS19465 PF00293 NUDIX domain ND05_RS19470 PF01336 OB-fold nucleic acid binding domain ND05_RS19470 PF00152 tRNA synthetases class II (D, K and N) ND05_RS19470 PF02938 GAD domain ND05_RS19480 PF01904 Protein of unknown function DUF72 ND05_RS19485 PF01124 MAPEG family ND05_RS19490 PF13649 Methyltransferase domain ND05_RS19495 PF08003 Protein of unknown function (DUF1698) ND05_RS19500 PF00384 Molybdopterin oxidoreductase ND05_RS19500 PF18364 Molybdopterin oxidoreductase N-terminal domain ND05_RS19500 PF01568 Molydopterin dinucleotide binding domain ND05_RS19505 PF03264 NapC/NirT cytochrome c family, N-terminal region ND05_RS19510 PF03932 CutC family ND05_RS19515 PF06185 YecM protein ND05_RS19525 PF05746 DALR anticodon binding domain ND05_RS19525 PF03485 Arginyl tRNA synthetase N terminal domain ND05_RS19525 PF00750 tRNA synthetases class I (R) ND05_RS19535 PF05717 IS66 Orf2 like protein ND05_RS19540 PF03050 Transposase IS66 family ND05_RS19540 PF13007 Transposase C of IS166 homeodomain ND05_RS19540 PF13005 zinc-finger binding domain of transposase IS66 ND05_RS19540 PF13817 IS66 C-terminal element ND05_RS19550 PF05717 IS66 Orf2 like protein ND05_RS19555 PF13005 zinc-finger binding domain of transposase IS66 ND05_RS19555 PF13817 IS66 C-terminal element ND05_RS19555 PF03050 Transposase IS66 family ND05_RS19555 PF13007 Transposase C of IS166 homeodomain ND05_RS19560 PF07007 Lysozyme inhibitor LprI ND05_RS19565 PF06366 Flagellar protein FlhE ND05_RS19575 PF01312 FlhB HrpN YscU SpaS Family ND05_RS19580 PF04344 Chemotaxis phosphatase, CheZ ND05_RS19585 PF00072 Response regulator receiver domain ND05_RS19590 PF01339 CheB methylesterase ND05_RS19590 PF00072 Response regulator receiver domain ND05_RS19595 PF01739 CheR methyltransferase, SAM binding domain ND05_RS19595 PF03705 CheR methyltransferase, all-alpha domain ND05_RS19600 PF02203 Tar ligand binding domain homologue ND05_RS19600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND05_RS19600 PF00672 HAMP domain ND05_RS19605 PF02203 Tar ligand binding domain homologue ND05_RS19605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND05_RS19605 PF00672 HAMP domain ND05_RS19610 PF01584 CheW-like domain ND05_RS19615 PF09078 CheY binding ND05_RS19615 PF01584 CheW-like domain ND05_RS19615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS19615 PF02895 Signal transducing histidine kinase, homodimeric domain ND05_RS19615 PF01627 Hpt domain ND05_RS19620 PF13677 Membrane MotB of proton-channel complex MotA/MotB ND05_RS19620 PF00691 OmpA family ND05_RS19625 PF01618 MotA/TolQ/ExbB proton channel family ND05_RS19630 PF05280 Flagellar transcriptional activator (FlhC) ND05_RS19635 PF05247 Flagellar transcriptional activator (FlhD) ND05_RS19640 PF00582 Universal stress protein family ND05_RS19645 PF00982 Glycosyltransferase family 20 ND05_RS19650 PF02358 Trehalose-phosphatase ND05_RS19655 PF02653 Branched-chain amino acid transport system / permease component ND05_RS19660 PF00005 ABC transporter ND05_RS19665 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ND05_RS19675 PF00210 Ferritin-like domain ND05_RS19680 PF10964 Protein of unknown function (DUF2766) ND05_RS19690 PF13992 YecR-like lipoprotein ND05_RS19695 PF00210 Ferritin-like domain ND05_RS19700 PF10678 Protein of unknown function (DUF2492) ND05_RS19705 PF03222 Tryptophan/tyrosine permease family ND05_RS19710 PF03695 Uncharacterised protein family (UPF0149) ND05_RS19710 PF02810 SEC-C motif ND05_RS19715 PF02899 Phage integrase, N-terminal SAM-like domain ND05_RS19715 PF00589 Phage integrase family ND05_RS19795 PF06406 StbA protein ND05_RS19910 PF03335 Phage tail fibre repeat ND05_RS19910 PF08400 Prophage tail fibre N-terminal ND05_RS19910 PF07484 Phage Tail Collar Domain ND05_RS19910 PF08400 Prophage tail fibre N-terminal ND05_RS19910 PF07484 Phage Tail Collar Domain ND05_RS19910 PF03335 Phage tail fibre repeat ND05_RS19915 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND05_RS19950 PF04984 Phage tail sheath protein subtilisin-like domain ND05_RS19950 PF17482 Phage tail sheath C-terminal domain ND05_RS20000 PF01066 CDP-alcohol phosphatidyltransferase ND05_RS20005 PF08459 UvrC Helix-hairpin-helix N-terminal ND05_RS20005 PF02151 UvrB/uvrC motif ND05_RS20005 PF01541 GIY-YIG catalytic domain ND05_RS20010 PF00196 Bacterial regulatory proteins, luxR family ND05_RS20010 PF00072 Response regulator receiver domain ND05_RS20020 PF10769 Protein of unknown function (DUF2594) ND05_RS20025 PF03472 Autoinducer binding domain ND05_RS20025 PF00196 Bacterial regulatory proteins, luxR family ND05_RS20030 PF00005 ABC transporter ND05_RS20035 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS20040 PF00291 Pyridoxal-phosphate dependent enzyme ND05_RS20045 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND05_RS20050 PF02899 Phage integrase, N-terminal SAM-like domain ND05_RS20055 PF04545 Sigma-70, region 4 ND05_RS20055 PF04539 Sigma-70 region 3 ND05_RS20055 PF04542 Sigma-70 region 2 ND05_RS20060 PF12445 Flagellin protein ND05_RS20060 PF00700 Bacterial flagellin C-terminal helical region ND05_RS20060 PF00669 Bacterial flagellin N-terminal helical region ND05_RS20070 PF07195 Flagellar hook-associated protein 2 C-terminus ND05_RS20070 PF02465 Flagellar hook-associated protein 2 N-terminus ND05_RS20075 PF02561 Flagellar protein FliS ND05_RS20080 PF05400 Flagellar protein FliT ND05_RS20085 PF00128 Alpha amylase, catalytic domain ND05_RS20085 PF02806 Alpha amylase, C-terminal all-beta domain ND05_RS20090 PF13987 YedD-like protein ND05_RS20100 PF04143 Sulphur transport ND05_RS20105 PF01206 Sulfurtransferase TusA ND05_RS20110 PF02586 SOS response associated peptidase (SRAP) ND05_RS20120 PF02049 Flagellar hook-basal body complex protein FliE ND05_RS20130 PF01514 Secretory protein of YscJ/FliF family ND05_RS20130 PF08345 Flagellar M-ring protein C-terminal ND05_RS20135 PF14841 FliG middle domain ND05_RS20135 PF14842 FliG N-terminal domain ND05_RS20135 PF01706 FliG C-terminal domain ND05_RS20140 PF02108 Flagellar assembly protein FliH ND05_RS20145 PF18269 T3SS EscN ATPase C-terminal domain ND05_RS20145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND05_RS20150 PF02050 Flagellar FliJ protein ND05_RS20155 PF02120 Flagellar hook-length control protein FliK ND05_RS20160 PF03748 Flagellar basal body-associated protein FliL ND05_RS20165 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ND05_RS20165 PF02154 Flagellar motor switch protein FliM ND05_RS20170 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ND05_RS20170 PF16973 Flagellar motor switch protein FliN N-terminal ND05_RS20175 PF04347 Flagellar biosynthesis protein, FliO ND05_RS20180 PF00813 FliP family ND05_RS20185 PF01313 Bacterial export proteins, family 3 ND05_RS20190 PF01311 Bacterial export proteins, family 1 ND05_RS20195 PF00196 Bacterial regulatory proteins, luxR family ND05_RS20200 PF10781 Dextransucrase DSRB ND05_RS20210 PF10733 Protein of unknown function (DUF2525) ND05_RS20220 PF00990 Diguanylate cyclase, GGDEF domain ND05_RS20220 PF17151 Periplasmic sensor domain ND05_RS20230 PF09926 Uncharacterized small protein (DUF2158) ND05_RS20235 PF05661 Protein of unknown function (DUF808) ND05_RS20240 PF00892 EamA-like transporter family ND05_RS20245 PF03852 DNA mismatch endonuclease Vsr ND05_RS20250 PF18284 DNA methylase N-terminal domain ND05_RS20250 PF00145 C-5 cytosine-specific DNA methylase ND05_RS20255 PF01966 HD domain ND05_RS20265 PF00267 Gram-negative porin ND05_RS20280 PF00512 His Kinase A (phospho-acceptor) domain ND05_RS20280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS20285 PF00486 Transcriptional regulatory protein, C terminal ND05_RS20285 PF00072 Response regulator receiver domain ND05_RS20290 PF00576 HIUase/Transthyretin family ND05_RS20295 PF00174 Oxidoreductase molybdopterin binding domain ND05_RS20300 PF01794 Ferric reductase like transmembrane component ND05_RS20305 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment ND05_RS20310 PF01292 Prokaryotic cytochrome b561 ND05_RS20335 PF04806 EspF protein repeat ND05_RS20350 PF13979 SopA-like catalytic domain ND05_RS20350 PF13981 SopA-like central domain ND05_RS20385 PF06167 Glucose-regulated metallo-peptidase M90 ND05_RS20395 PF02369 Bacterial Ig-like domain (group 1) ND05_RS20395 PF11924 Inverse autotransporter, beta-domain ND05_RS20395 PF09134 Invasin, domain 3 ND05_RS20415 PF07690 Major Facilitator Superfamily ND05_RS20415 PF00083 Sugar (and other) transporter ND05_RS20420 PF01048 Phosphorylase superfamily ND05_RS20420 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ND05_RS20425 PF01709 Transcriptional regulator ND05_RS20445 PF01554 MatE ND05_RS20455 PF00589 Phage integrase family ND05_RS20455 PF13356 Arm DNA-binding domain ND05_RS20495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS20495 PF03466 LysR substrate binding domain ND05_RS20500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS20500 PF03466 LysR substrate binding domain ND05_RS20510 PF03734 L,D-transpeptidase catalytic domain ND05_RS20510 PF17969 L,D-transpeptidase C-terminal domain ND05_RS20515 PF02277 Phosphoribosyltransferase ND05_RS20520 PF02654 Cobalamin-5-phosphate synthase ND05_RS20525 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ND05_RS20530 PF01890 Cobalamin synthesis G C-terminus ND05_RS20530 PF11760 Cobalamin synthesis G N-terminal ND05_RS20530 PF11761 Cobalamin biosynthesis central region ND05_RS20535 PF10114 Sensory domain found in PocR ND05_RS20535 PF12833 Helix-turn-helix domain ND05_RS20540 PF00230 Major intrinsic protein ND05_RS20545 PF00936 BMC domain ND05_RS20550 PF00936 BMC domain ND05_RS20555 PF02286 Dehydratase large subunit ND05_RS20560 PF02288 Dehydratase medium subunit ND05_RS20565 PF02287 Dehydratase small subunit ND05_RS20570 PF08841 Diol dehydratase reactivase ATPase-like domain ND05_RS20570 PF18427 DD-reactivating factor swiveling domain ND05_RS20580 PF00936 BMC domain ND05_RS20585 PF00936 BMC domain ND05_RS20590 PF06130 Phosphate propanoyltransferase ND05_RS20600 PF03319 Ethanolamine utilisation protein EutN/carboxysome ND05_RS20605 PF01923 Cobalamin adenosyltransferase ND05_RS20610 PF00171 Aldehyde dehydrogenase family ND05_RS20615 PF00171 Aldehyde dehydrogenase family ND05_RS20615 PF00465 Iron-containing alcohol dehydrogenase ND05_RS20620 PF10531 SLBB domain ND05_RS20620 PF13375 RnfC Barrel sandwich hybrid domain ND05_RS20620 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ND05_RS20620 PF13237 4Fe-4S dicluster domain ND05_RS20630 PF00936 BMC domain ND05_RS20635 PF10662 Ethanolamine utilisation - propanediol utilisation ND05_RS20640 PF04363 Protein of unknown function (DUF496) ND05_RS20645 PF04632 Fusaric acid resistance protein family ND05_RS20650 PF06445 GyrI-like small molecule binding domain ND05_RS20655 PF00768 D-alanyl-D-alanine carboxypeptidase ND05_RS20655 PF07943 Penicillin-binding protein 5, C-terminal domain ND05_RS20660 PF00929 Exonuclease ND05_RS20660 PF08411 Exonuclease C-terminal ND05_RS20665 PF01206 Sulfurtransferase TusA ND05_RS20670 PF04143 Sulphur transport ND05_RS20675 PF13520 Amino acid permease ND05_RS20685 PF03466 LysR substrate binding domain ND05_RS20685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS20690 PF01370 NAD dependent epimerase/dehydratase family ND05_RS20695 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system ND05_RS20700 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system ND05_RS20715 PF01634 ATP phosphoribosyltransferase ND05_RS20715 PF08029 HisG, C-terminal domain ND05_RS20720 PF00815 Histidinol dehydrogenase ND05_RS20725 PF00155 Aminotransferase class I and II ND05_RS20730 PF08645 Polynucleotide kinase 3 phosphatase ND05_RS20730 PF00475 Imidazoleglycerol-phosphate dehydratase ND05_RS20735 PF00117 Glutamine amidotransferase class-I ND05_RS20740 PF00977 Histidine biosynthesis protein ND05_RS20745 PF00977 Histidine biosynthesis protein ND05_RS20750 PF01502 Phosphoribosyl-AMP cyclohydrolase ND05_RS20750 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ND05_RS20755 PF02706 Chain length determinant protein ND05_RS20760 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ND05_RS20760 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ND05_RS20760 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ND05_RS20765 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ND05_RS20765 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ND05_RS20770 PF00534 Glycosyl transferases group 1 ND05_RS20770 PF13477 Glycosyl transferase 4-like ND05_RS20775 PF00534 Glycosyl transferases group 1 ND05_RS20775 PF13439 Glycosyltransferase Family 4 ND05_RS20780 PF00733 Asparagine synthase ND05_RS20780 PF13537 Glutamine amidotransferase domain ND05_RS20795 PF00535 Glycosyl transferase family 2 ND05_RS20810 PF08889 WbqC-like protein family ND05_RS20815 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ND05_RS20820 PF00483 Nucleotidyl transferase ND05_RS20825 PF16363 GDP-mannose 4,6 dehydratase ND05_RS20830 PF01370 NAD dependent epimerase/dehydratase family ND05_RS20835 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ND05_RS20835 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ND05_RS20835 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ND05_RS20840 PF00483 Nucleotidyl transferase ND05_RS20850 PF00534 Glycosyl transferases group 1 ND05_RS20850 PF13439 Glycosyltransferase Family 4 ND05_RS20855 PF04230 Polysaccharide pyruvyl transferase ND05_RS20865 PF02397 Bacterial sugar transferase ND05_RS20870 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ND05_RS20870 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ND05_RS20870 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ND05_RS20870 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ND05_RS20875 PF00483 Nucleotidyl transferase ND05_RS20875 PF01050 Mannose-6-phosphate isomerase ND05_RS20880 PF00534 Glycosyl transferases group 1 ND05_RS20880 PF13579 Glycosyl transferase 4-like domain ND05_RS20885 PF00293 NUDIX domain ND05_RS20890 PF01370 NAD dependent epimerase/dehydratase family ND05_RS20895 PF16363 GDP-mannose 4,6 dehydratase ND05_RS20900 PF00132 Bacterial transferase hexapeptide (six repeats) ND05_RS20905 PF00535 Glycosyl transferase family 2 ND05_RS20915 PF13439 Glycosyltransferase Family 4 ND05_RS20915 PF00534 Glycosyl transferases group 1 ND05_RS20920 PF00132 Bacterial transferase hexapeptide (six repeats) ND05_RS20925 PF00535 Glycosyl transferase family 2 ND05_RS20930 PF13807 G-rich domain on putative tyrosine kinase ND05_RS20930 PF13614 AAA domain ND05_RS20930 PF02706 Chain length determinant protein ND05_RS20935 PF01451 Low molecular weight phosphotyrosine protein phosphatase ND05_RS20940 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ND05_RS20940 PF10531 SLBB domain ND05_RS20940 PF02563 Polysaccharide biosynthesis/export protein ND05_RS20945 PF00571 CBS domain ND05_RS20945 PF03471 Transporter associated domain ND05_RS20945 PF03741 Integral membrane protein TerC family ND05_RS20950 PF05170 AsmA family ND05_RS20955 PF00692 dUTPase ND05_RS20960 PF00485 Phosphoribulokinase / Uridine kinase family ND05_RS20965 PF08448 PAS fold ND05_RS20965 PF13426 PAS domain ND05_RS20965 PF00563 EAL domain ND05_RS20965 PF00990 Diguanylate cyclase, GGDEF domain ND05_RS20965 PF05231 MASE1 ND05_RS20965 PF08447 PAS fold ND05_RS20970 PF06029 AlkA N-terminal domain ND05_RS20970 PF00730 HhH-GPD superfamily base excision DNA repair protein ND05_RS20975 PF00012 Hsp70 protein ND05_RS20985 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) ND05_RS20995 PF00092 von Willebrand factor type A domain ND05_RS21020 PF13533 Biotin-lipoyl like ND05_RS21025 PF00873 AcrB/AcrD/AcrF family ND05_RS21030 PF00873 AcrB/AcrD/AcrF family ND05_RS21035 PF07690 Major Facilitator Superfamily ND05_RS21040 PF00512 His Kinase A (phospho-acceptor) domain ND05_RS21040 PF00672 HAMP domain ND05_RS21040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS21045 PF00072 Response regulator receiver domain ND05_RS21045 PF00486 Transcriptional regulatory protein, C terminal ND05_RS21050 PF07411 Domain of unknown function (DUF1508) ND05_RS21055 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH ND05_RS21065 PF01136 Peptidase family U32 ND05_RS21065 PF16325 Peptidase family U32 C-terminal domain ND05_RS21080 PF00781 Diacylglycerol kinase catalytic domain ND05_RS21085 PF08220 DeoR-like helix-turn-helix domain ND05_RS21090 PF08240 Alcohol dehydrogenase GroES-like domain ND05_RS21090 PF00107 Zinc-binding dehydrogenase ND05_RS21095 PF03611 PTS system sugar-specific permease component ND05_RS21100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND05_RS21105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND05_RS21110 PF08013 Tagatose 6 phosphate kinase ND05_RS21115 PF01116 Fructose-bisphosphate aldolase class-II ND05_RS21120 PF01791 DeoC/LacD family aldolase ND05_RS21125 PF03825 Nucleoside H+ symporter ND05_RS21130 PF03747 ADP-ribosylglycohydrolase ND05_RS21135 PF00294 pfkB family carbohydrate kinase ND05_RS21140 PF07702 UTRA domain ND05_RS21140 PF00392 Bacterial regulatory proteins, gntR family ND05_RS21145 PF01183 Glycosyl hydrolases family 25 ND05_RS21150 PF08543 Phosphomethylpyrimidine kinase ND05_RS21155 PF02110 Hydroxyethylthiazole kinase family ND05_RS21160 PF02583 Metal-sensitive transcriptional repressor ND05_RS21165 PF03824 High-affinity nickel-transport protein ND05_RS21170 PF11776 Nickel/cobalt transporter regulator ND05_RS21175 PF00419 Fimbrial protein ND05_RS21180 PF13954 PapC N-terminal domain ND05_RS21180 PF00577 Outer membrane usher protein ND05_RS21180 PF13953 PapC C-terminal domain ND05_RS21185 PF02753 Pili assembly chaperone PapD, C-terminal domain ND05_RS21185 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND05_RS21190 PF00419 Fimbrial protein ND05_RS21200 PF10836 Protein of unknown function (DUF2574) ND05_RS21205 PF10609 NUBPL iron-transfer P-loop NTPase ND05_RS21210 PF09334 tRNA synthetases class I (M) ND05_RS21210 PF01588 Putative tRNA binding domain ND05_RS21215 PF13569 Domain of unknown function (DUF4132) ND05_RS21225 PF13569 Domain of unknown function (DUF4132) ND05_RS21240 PF07728 AAA domain (dynein-related subfamily) ND05_RS21250 PF05762 VWA domain containing CoxE-like protein ND05_RS21255 PF04434 SWIM zinc finger ND05_RS21260 PF06998 Protein of unknown function (DUF1307) ND05_RS21265 PF07308 Protein of unknown function (DUF1456) ND05_RS21270 PF04397 LytTr DNA-binding domain ND05_RS21270 PF00072 Response regulator receiver domain ND05_RS21275 PF07694 5TMR of 5TMR-LYT ND05_RS21275 PF06580 Histidine kinase ND05_RS21280 PF13411 MerR HTH family regulatory protein ND05_RS21290 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS21295 PF00005 ABC transporter ND05_RS21300 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS21305 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ND05_RS21310 PF14310 Fibronectin type III-like domain ND05_RS21310 PF00933 Glycosyl hydrolase family 3 N terminal domain ND05_RS21310 PF01915 Glycosyl hydrolase family 3 C-terminal domain ND05_RS21315 PF09330 D-lactate dehydrogenase, membrane binding ND05_RS21315 PF01565 FAD binding domain ND05_RS21320 PF00768 D-alanyl-D-alanine carboxypeptidase ND05_RS21325 PF04893 Yip1 domain ND05_RS21330 PF09335 SNARE associated Golgi protein ND05_RS21340 PF02321 Outer membrane efflux protein ND05_RS21360 PF01207 Dihydrouridine synthase (Dus) ND05_RS21365 PF03788 LrgA family ND05_RS21370 PF04172 LrgB-like family ND05_RS21375 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ND05_RS21375 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ND05_RS21380 PF02698 DUF218 domain ND05_RS21385 PF10808 Protein of unknown function (DUF2542) ND05_RS21390 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND05_RS21390 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ND05_RS21395 PF01180 Dihydroorotate dehydrogenase ND05_RS21400 PF02653 Branched-chain amino acid transport system / permease component ND05_RS21405 PF00005 ABC transporter ND05_RS21410 PF13407 Periplasmic binding protein domain ND05_RS21415 PF00356 Bacterial regulatory proteins, lacI family ND05_RS21425 PF04235 Protein of unknown function (DUF418) ND05_RS21430 PF01227 GTP cyclohydrolase I ND05_RS21445 PF00756 Putative esterase ND05_RS21450 PF00593 TonB dependent receptor ND05_RS21450 PF07715 TonB-dependent Receptor Plug Domain ND05_RS21460 PF00324 Amino acid permease ND05_RS21470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS21470 PF03466 LysR substrate binding domain ND05_RS21475 PF03601 Conserved hypothetical protein 698 ND05_RS21480 PF01261 Xylose isomerase-like TIM barrel ND05_RS21485 PF00294 pfkB family carbohydrate kinase ND05_RS21490 PF01773 Na+ dependent nucleoside transporter N-terminus ND05_RS21490 PF07662 Na+ dependent nucleoside transporter C-terminus ND05_RS21495 PF01156 Inosine-uridine preferring nucleoside hydrolase ND05_RS21500 PF00027 Cyclic nucleotide-binding domain ND05_RS21505 PF07662 Na+ dependent nucleoside transporter C-terminus ND05_RS21505 PF01773 Na+ dependent nucleoside transporter N-terminus ND05_RS21510 PF04227 Indigoidine synthase A like protein ND05_RS21515 PF04227 Indigoidine synthase A like protein ND05_RS21520 PF00294 pfkB family carbohydrate kinase ND05_RS21525 PF02378 Phosphotransferase system, EIIC ND05_RS21525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND05_RS21530 PF00294 pfkB family carbohydrate kinase ND05_RS21535 PF00381 PTS HPr component phosphorylation site ND05_RS21535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND05_RS21540 PF07690 Major Facilitator Superfamily ND05_RS21545 PF03692 Putative zinc- or iron-chelating domain ND05_RS21550 PF08207 Elongation factor P (EF-P) KOW-like domain ND05_RS21550 PF09285 Elongation factor P, C-terminal ND05_RS21550 PF01132 Elongation factor P (EF-P) OB domain ND05_RS21555 PF01232 Mannitol dehydrogenase Rossmann domain ND05_RS21555 PF08125 Mannitol dehydrogenase C-terminal domain ND05_RS21560 PF07683 Cobalamin synthesis protein cobW C-terminal domain ND05_RS21560 PF02492 CobW/HypB/UreG, nucleotide-binding domain ND05_RS21565 PF01569 PAP2 superfamily ND05_RS21570 PF00877 NlpC/P60 family ND05_RS21575 PF12792 CSS motif domain associated with EAL ND05_RS21575 PF00563 EAL domain ND05_RS21580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ND05_RS21585 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS21590 PF12911 N-terminal TM domain of oligopeptide transport permease C ND05_RS21590 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS21595 PF00005 ABC transporter ND05_RS21595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ND05_RS21600 PF13989 YejG-like protein ND05_RS21610 PF07690 Major Facilitator Superfamily ND05_RS21615 PF01479 S4 domain ND05_RS21615 PF00849 RNA pseudouridylate synthase ND05_RS21625 PF04851 Type III restriction enzyme, res subunit ND05_RS21625 PF00271 Helicase conserved C-terminal domain ND05_RS21630 PF01386 Ribosomal L25p family ND05_RS21635 PF04245 37-kD nucleoid-associated bacterial protein ND05_RS21640 PF07208 Protein of unknown function (DUF1414) ND05_RS21645 PF11893 Domain of unknown function (DUF3413) ND05_RS21645 PF00884 Sulfatase ND05_RS21660 PF03797 Autotransporter beta-domain ND05_RS21660 PF16168 Adhesin of bacterial autotransporter system, probable stalk ND05_RS21660 PF03212 Pertactin ND05_RS21670 PF00196 Bacterial regulatory proteins, luxR family ND05_RS21670 PF00072 Response regulator receiver domain ND05_RS21675 PF03918 Cytochrome C biogenesis protein ND05_RS21680 PF08534 Redoxin ND05_RS21685 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ND05_RS21685 PF01578 Cytochrome C assembly protein ND05_RS21690 PF03100 CcmE ND05_RS21695 PF04995 Heme exporter protein D (CcmD) ND05_RS21700 PF01578 Cytochrome C assembly protein ND05_RS21705 PF03379 CcmB protein ND05_RS21710 PF00005 ABC transporter ND05_RS21715 PF03264 NapC/NirT cytochrome c family, N-terminal region ND05_RS21720 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ND05_RS21725 PF12801 4Fe-4S binding domain ND05_RS21725 PF13237 4Fe-4S dicluster domain ND05_RS21730 PF12800 4Fe-4S binding domain ND05_RS21730 PF12838 4Fe-4S dicluster domain ND05_RS21735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND05_RS21735 PF00384 Molybdopterin oxidoreductase ND05_RS21735 PF01568 Molydopterin dinucleotide binding domain ND05_RS21740 PF03927 NapD protein ND05_RS21745 PF00037 4Fe-4S binding domain ND05_RS21745 PF13187 4Fe-4S dicluster domain ND05_RS21745 PF12800 4Fe-4S binding domain ND05_RS21755 PF03974 Ecotin ND05_RS21760 PF06039 Malate:quinone oxidoreductase (Mqo) ND05_RS21765 PF00005 ABC transporter ND05_RS21770 PF13532 2OG-Fe(II) oxygenase superfamily ND05_RS21775 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ND05_RS21775 PF02805 Metal binding domain of Ada ND05_RS21775 PF12833 Helix-turn-helix domain ND05_RS21775 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ND05_RS21780 PF02424 ApbE family ND05_RS21785 PF00267 Gram-negative porin ND05_RS21800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS21800 PF01627 Hpt domain ND05_RS21800 PF16359 RcsD-ABL domain ND05_RS21805 PF00072 Response regulator receiver domain ND05_RS21805 PF00196 Bacterial regulatory proteins, luxR family ND05_RS21810 PF00072 Response regulator receiver domain ND05_RS21810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS21810 PF09456 RcsC Alpha-Beta-Loop (ABL) ND05_RS21810 PF00512 His Kinase A (phospho-acceptor) domain ND05_RS21815 PF00989 PAS fold ND05_RS21815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS21815 PF00512 His Kinase A (phospho-acceptor) domain ND05_RS21820 PF02954 Bacterial regulatory protein, Fis family ND05_RS21820 PF00072 Response regulator receiver domain ND05_RS21820 PF00158 Sigma-54 interaction domain ND05_RS21825 PF01144 Coenzyme A transferase ND05_RS21830 PF01144 Coenzyme A transferase ND05_RS21835 PF02667 Short chain fatty acid transporter ND05_RS21840 PF02803 Thiolase, C-terminal domain ND05_RS21840 PF00108 Thiolase, N-terminal domain ND05_RS21845 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) ND05_RS21850 PF08486 Stage II sporulation protein ND05_RS21850 PF10062 Predicted secreted protein (DUF2300) ND05_RS21855 PF01835 MG2 domain ND05_RS21855 PF00207 Alpha-2-macroglobulin family ND05_RS21855 PF07703 Alpha-2-macroglobulin bait region domain ND05_RS21860 PF06672 Protein of unknown function (DUF1175) ND05_RS21865 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) ND05_RS21870 PF00521 DNA gyrase/topoisomerase IV, subunit A ND05_RS21870 PF03989 DNA gyrase C-terminal domain, beta-propeller ND05_RS21880 PF03797 Autotransporter beta-domain ND05_RS21880 PF12951 Passenger-associated-transport-repeat ND05_RS21880 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat ND05_RS21890 PF03477 ATP cone domain ND05_RS21890 PF02867 Ribonucleotide reductase, barrel domain ND05_RS21890 PF00317 Ribonucleotide reductase, all-alpha domain ND05_RS21895 PF00268 Ribonucleotide reductase, small chain ND05_RS21900 PF00111 2Fe-2S iron-sulfur cluster binding domain ND05_RS21915 PF03009 Glycerophosphoryl diester phosphodiesterase family ND05_RS21920 PF07690 Major Facilitator Superfamily ND05_RS21925 PF04324 BFD-like [2Fe-2S] binding domain ND05_RS21925 PF01266 FAD dependent oxidoreductase ND05_RS21930 PF00890 FAD binding domain ND05_RS21935 PF02754 Cysteine-rich domain ND05_RS21935 PF13183 4Fe-4S dicluster domain ND05_RS21940 PF04754 Putative transposase, YhgA-like ND05_RS21945 PF03328 HpcH/HpaI aldolase/citrate lyase family ND05_RS21950 PF07690 Major Facilitator Superfamily ND05_RS21955 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ND05_RS21955 PF13378 Enolase C-terminal domain-like ND05_RS21960 PF01614 Bacterial transcriptional regulator ND05_RS21960 PF09339 IclR helix-turn-helix domain ND05_RS21965 PF00994 Probable molybdopterin binding domain ND05_RS21970 PF07437 YfaZ precursor ND05_RS21975 PF00293 NUDIX domain ND05_RS21980 PF00300 Histidine phosphatase superfamily (branch 1) ND05_RS21985 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ND05_RS21990 PF00535 Glycosyl transferase family 2 ND05_RS21995 PF01370 NAD dependent epimerase/dehydratase family ND05_RS21995 PF02911 Formyl transferase, C-terminal domain ND05_RS21995 PF00551 Formyl transferase ND05_RS22000 PF01522 Polysaccharide deacetylase ND05_RS22005 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ND05_RS22010 PF00892 EamA-like transporter family ND05_RS22025 PF00501 AMP-binding enzyme ND05_RS22025 PF13193 AMP-binding enzyme C-terminal domain ND05_RS22030 PF13378 Enolase C-terminal domain-like ND05_RS22035 PF00378 Enoyl-CoA hydratase/isomerase ND05_RS22040 PF12697 Alpha/beta hydrolase family ND05_RS22045 PF16582 Middle domain of thiamine pyrophosphate ND05_RS22045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND05_RS22045 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND05_RS22050 PF00425 chorismate binding enzyme ND05_RS22055 PF05957 Bacterial protein of unknown function (DUF883) ND05_RS22060 PF13673 Acetyltransferase (GNAT) domain ND05_RS22065 PF12706 Beta-lactamase superfamily domain ND05_RS22080 PF08974 Domain of unknown function (DUF1877) ND05_RS22085 PF00361 Proton-conducting membrane transporter ND05_RS22090 PF00361 Proton-conducting membrane transporter ND05_RS22095 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ND05_RS22095 PF00361 Proton-conducting membrane transporter ND05_RS22100 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ND05_RS22105 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ND05_RS22110 PF12838 4Fe-4S dicluster domain ND05_RS22115 PF00146 NADH dehydrogenase ND05_RS22120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ND05_RS22120 PF00384 Molybdopterin oxidoreductase ND05_RS22120 PF01568 Molydopterin dinucleotide binding domain ND05_RS22120 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ND05_RS22125 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ND05_RS22125 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ND05_RS22125 PF10531 SLBB domain ND05_RS22135 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ND05_RS22135 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ND05_RS22140 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ND05_RS22145 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ND05_RS22150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS22150 PF03466 LysR substrate binding domain ND05_RS22160 PF00155 Aminotransferase class I and II ND05_RS22170 PF02080 TrkA-C domain ND05_RS22170 PF03600 Citrate transporter ND05_RS22175 PF13419 Haloacid dehalogenase-like hydrolase ND05_RS22180 PF03887 YfbU domain ND05_RS22185 PF04217 Protein of unknown function, DUF412 ND05_RS22190 PF00871 Acetokinase family ND05_RS22195 PF01515 Phosphate acetyl/butaryl transferase ND05_RS22195 PF07085 DRTGG domain ND05_RS22200 PF03606 C4-dicarboxylate anaerobic carrier ND05_RS22205 PF00293 NUDIX domain ND05_RS22210 PF12850 Calcineurin-like phosphoesterase superfamily domain ND05_RS22215 PF02798 Glutathione S-transferase, N-terminal domain ND05_RS22215 PF14834 Glutathione S-transferase, C-terminal domain ND05_RS22220 PF00043 Glutathione S-transferase, C-terminal domain ND05_RS22220 PF02798 Glutathione S-transferase, N-terminal domain ND05_RS22225 PF02152 Dihydroneopterin aldolase ND05_RS22230 PF08338 Domain of unknown function (DUF1731) ND05_RS22230 PF01370 NAD dependent epimerase/dehydratase family ND05_RS22235 PF04754 Putative transposase, YhgA-like ND05_RS22240 PF00005 ABC transporter ND05_RS22245 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS22250 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS22255 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND05_RS22260 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND05_RS22265 PF02441 Flavoprotein ND05_RS22270 PF00156 Phosphoribosyl transferase domain ND05_RS22275 PF02674 Colicin V production protein ND05_RS22280 PF05036 Sporulation related domain ND05_RS22285 PF08245 Mur ligase middle domain ND05_RS22285 PF02875 Mur ligase family, glutamate ligase domain ND05_RS22290 PF17848 Acetyl-coA carboxylase zinc finger domain ND05_RS22290 PF01039 Carboxyl transferase domain ND05_RS22295 PF09335 SNARE associated Golgi protein ND05_RS22300 PF01416 tRNA pseudouridine synthase ND05_RS22305 PF02774 Semialdehyde dehydrogenase, dimerisation domain ND05_RS22305 PF01118 Semialdehyde dehydrogenase, NAD binding domain ND05_RS22310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND05_RS22310 PF11890 Domain of unknown function (DUF3410) ND05_RS22310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ND05_RS22320 PF07690 Major Facilitator Superfamily ND05_RS22330 PF00109 Beta-ketoacyl synthase, N-terminal domain ND05_RS22330 PF02801 Beta-ketoacyl synthase, C-terminal domain ND05_RS22335 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ND05_RS22335 PF01266 FAD dependent oxidoreductase ND05_RS22340 PF08891 YfcL protein ND05_RS22345 PF04315 Elongation factor P hydroxylase ND05_RS22350 PF01925 Sulfite exporter TauE/SafE ND05_RS22355 PF03411 Penicillin-insensitive murein endopeptidase ND05_RS22360 PF01264 Chorismate synthase ND05_RS22365 PF05175 Methyltransferase small domain ND05_RS22370 PF01713 Smr domain ND05_RS22375 PF11245 Protein of unknown function (DUF2544) ND05_RS22380 PF00419 Fimbrial protein ND05_RS22385 PF00419 Fimbrial protein ND05_RS22390 PF00419 Fimbrial protein ND05_RS22395 PF02753 Pili assembly chaperone PapD, C-terminal domain ND05_RS22395 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND05_RS22405 PF00419 Fimbrial protein ND05_RS22410 PF00300 Histidine phosphatase superfamily (branch 1) ND05_RS22415 PF00378 Enoyl-CoA hydratase/isomerase ND05_RS22415 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ND05_RS22415 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ND05_RS22420 PF02803 Thiolase, C-terminal domain ND05_RS22420 PF00108 Thiolase, N-terminal domain ND05_RS22425 PF04175 Protein of unknown function (DUF406) ND05_RS22435 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ND05_RS22450 PF04333 MlaA lipoprotein ND05_RS22460 PF01226 Formate/nitrite transporter ND05_RS22475 PF13276 HTH-like domain ND05_RS22475 PF13333 Integrase core domain ND05_RS22475 PF00665 Integrase core domain ND05_RS22510 PF13505 Outer membrane protein beta-barrel domain ND05_RS22515 PF00665 Integrase core domain ND05_RS22615 PF03245 Bacteriophage Rz lysis protein ND05_RS22625 PF00959 Phage lysozyme ND05_RS22630 PF04971 Bacteriophage P21 holin S ND05_RS22645 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ND05_RS22655 PF02258 Shiga-like toxin beta subunit ND05_RS22660 PF00161 Ribosome inactivating protein ND05_RS22690 PF06530 Phage antitermination protein Q ND05_RS22735 PF05772 NinB protein ND05_RS22755 PF03796 DnaB-like helicase C terminal domain ND05_RS22805 PF13276 HTH-like domain ND05_RS22805 PF00665 Integrase core domain ND05_RS22805 PF13333 Integrase core domain ND05_RS22815 PF00665 Integrase core domain ND05_RS22815 PF13276 HTH-like domain ND05_RS22815 PF13333 Integrase core domain ND05_RS22820 PF01527 Transposase ND05_RS22830 PF10800 Protein of unknown function (DUF2528) ND05_RS22955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS22955 PF03466 LysR substrate binding domain ND05_RS22960 PF02447 GntP family permease ND05_RS22965 PF00291 Pyridoxal-phosphate dependent enzyme ND05_RS22970 PF07690 Major Facilitator Superfamily ND05_RS22975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND05_RS22975 PF00529 HlyD membrane-fusion protein of T1SS ND05_RS22980 PF00072 Response regulator receiver domain ND05_RS22980 PF00196 Bacterial regulatory proteins, luxR family ND05_RS22985 PF00512 His Kinase A (phospho-acceptor) domain ND05_RS22985 PF01627 Hpt domain ND05_RS22985 PF00072 Response regulator receiver domain ND05_RS22985 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND05_RS22985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS22990 PF02515 CoA-transferase family III ND05_RS22995 PF03547 Membrane transport protein ND05_RS23000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ND05_RS23000 PF00205 Thiamine pyrophosphate enzyme, central domain ND05_RS23000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ND05_RS23005 PF02515 CoA-transferase family III ND05_RS23010 PF10938 YfdX protein ND05_RS23020 PF10810 Protein of unknown function (DUF2545) ND05_RS23030 PF03279 Bacterial lipid A biosynthesis acyltransferase ND05_RS23040 PF00155 Aminotransferase class I and II ND05_RS23045 PF07694 5TMR of 5TMR-LYT ND05_RS23045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS23045 PF06580 Histidine kinase ND05_RS23050 PF00072 Response regulator receiver domain ND05_RS23050 PF04397 LytTr DNA-binding domain ND05_RS23055 PF12833 Helix-turn-helix domain ND05_RS23060 PF00391 PEP-utilising enzyme, mobile domain ND05_RS23060 PF00381 PTS HPr component phosphorylation site ND05_RS23060 PF02896 PEP-utilising enzyme, TIM barrel domain ND05_RS23060 PF05524 PEP-utilising enzyme, N-terminal ND05_RS23060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND05_RS23065 PF05343 M42 glutamyl aminopeptidase ND05_RS23070 PF00557 Metallopeptidase family M24 ND05_RS23070 PF01321 Creatinase/Prolidase N-terminal domain ND05_RS23075 PF02378 Phosphotransferase system, EIIC ND05_RS23080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND05_RS23085 PF02685 Glucokinase ND05_RS23090 PF00654 Voltage gated chloride channel ND05_RS23095 PF10697 Protein of unknown function (DUF2502) ND05_RS23100 PF01566 Natural resistance-associated macrophage protein ND05_RS23105 PF07670 Nucleoside recognition ND05_RS23105 PF01773 Na+ dependent nucleoside transporter N-terminus ND05_RS23105 PF07662 Na+ dependent nucleoside transporter C-terminus ND05_RS23110 PF00563 EAL domain ND05_RS23110 PF05231 MASE1 ND05_RS23125 PF07037 Putative transcription regulator (DUF1323) ND05_RS23130 PF07037 Putative transcription regulator (DUF1323) ND05_RS23135 PF00749 tRNA synthetases class I (E and Q), catalytic domain ND05_RS23160 PF03466 LysR substrate binding domain ND05_RS23160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS23170 PF12843 Putative quorum-sensing-regulated virulence factor ND05_RS23175 PF01653 NAD-dependent DNA ligase adenylation domain ND05_RS23175 PF03120 NAD-dependent DNA ligase OB-fold domain ND05_RS23175 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ND05_RS23175 PF00533 BRCA1 C Terminus (BRCT) domain ND05_RS23175 PF12826 Helix-hairpin-helix motif ND05_RS23180 PF04354 ZipA, C-terminal FtsZ-binding domain ND05_RS23190 PF00291 Pyridoxal-phosphate dependent enzyme ND05_RS23195 PF00381 PTS HPr component phosphorylation site ND05_RS23200 PF00391 PEP-utilising enzyme, mobile domain ND05_RS23200 PF05524 PEP-utilising enzyme, N-terminal ND05_RS23200 PF02896 PEP-utilising enzyme, TIM barrel domain ND05_RS23205 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ND05_RS23210 PF08543 Phosphomethylpyrimidine kinase ND05_RS23215 PF17263 Family of unknown function (DUF5329) ND05_RS23220 PF00291 Pyridoxal-phosphate dependent enzyme ND05_RS23225 PF00005 ABC transporter ND05_RS23230 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS23235 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS23255 PF01418 Helix-turn-helix domain, rpiR family ND05_RS23255 PF01380 SIS domain ND05_RS23260 PF01380 SIS domain ND05_RS23265 PF00367 phosphotransferase system, EIIB ND05_RS23265 PF02378 Phosphotransferase system, EIIC ND05_RS23270 PF00144 Beta-lactamase ND05_RS23275 PF04261 Dyp-type peroxidase family ND05_RS23280 PF06572 Protein of unknown function (DUF1131) ND05_RS23285 PF11143 Protein of unknown function (DUF2919) ND05_RS23290 PF00583 Acetyltransferase (GNAT) family ND05_RS23295 PF01520 N-acetylmuramoyl-L-alanine amidase ND05_RS23300 PF01218 Coproporphyrinogen III oxidase ND05_RS23305 PF12833 Helix-turn-helix domain ND05_RS23310 PF00936 BMC domain ND05_RS23310 PF16365 Ethanolamine utilization protein EutK C-terminus ND05_RS23315 PF00936 BMC domain ND05_RS23320 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ND05_RS23325 PF06751 Ethanolamine ammonia lyase large subunit (EutB) ND05_RS23330 PF06277 Ethanolamine utilisation protein EutA ND05_RS23335 PF04346 Ethanolamine utilisation protein, EutH ND05_RS23340 PF00465 Iron-containing alcohol dehydrogenase ND05_RS23350 PF00171 Aldehyde dehydrogenase family ND05_RS23355 PF03319 Ethanolamine utilisation protein EutN/carboxysome ND05_RS23360 PF00936 BMC domain ND05_RS23365 PF01515 Phosphate acetyl/butaryl transferase ND05_RS23370 PF01923 Cobalamin adenosyltransferase ND05_RS23375 PF06249 Ethanolamine utilisation protein EutQ ND05_RS23380 PF10662 Ethanolamine utilisation - propanediol utilisation ND05_RS23385 PF00936 BMC domain ND05_RS23395 PF03949 Malic enzyme, NAD binding domain ND05_RS23395 PF00390 Malic enzyme, N-terminal domain ND05_RS23395 PF01515 Phosphate acetyl/butaryl transferase ND05_RS23400 PF00923 Transaldolase/Fructose-6-phosphate aldolase ND05_RS23405 PF02779 Transketolase, pyrimidine binding domain ND05_RS23405 PF00456 Transketolase, thiamine diphosphate binding domain ND05_RS23405 PF02780 Transketolase, C-terminal domain ND05_RS23410 PF06674 Protein of unknown function (DUF1176) ND05_RS23415 PF00293 NUDIX domain ND05_RS23420 PF13247 4Fe-4S dicluster domain ND05_RS23420 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ND05_RS23420 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND05_RS23425 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ND05_RS23425 PF07730 Histidine kinase ND05_RS23425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS23425 PF00672 HAMP domain ND05_RS23430 PF00873 AcrB/AcrD/AcrF family ND05_RS23445 PF03960 ArsC family ND05_RS23450 PF07687 Peptidase dimerisation domain ND05_RS23450 PF01546 Peptidase family M20/M25/M40 ND05_RS23455 PF13980 Uncharacterised protein family (UPF0370) ND05_RS23465 PF08351 Domain of unknown function (DUF1726) ND05_RS23465 PF13718 GNAT acetyltransferase 2 ND05_RS23465 PF05127 Helicase ND05_RS23465 PF17176 tRNA-binding domain ND05_RS23470 PF04228 Putative neutral zinc metallopeptidase ND05_RS23475 PF01850 PIN domain ND05_RS23480 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ND05_RS23485 PF01259 SAICAR synthetase ND05_RS23490 PF06804 NlpB/DapX lipoprotein ND05_RS23495 PF00701 Dihydrodipicolinate synthetase family ND05_RS23500 PF01842 ACT domain ND05_RS23505 PF00578 AhpC/TSA family ND05_RS23510 PF00037 4Fe-4S binding domain ND05_RS23510 PF12798 4Fe-4S binding domain ND05_RS23520 PF00146 NADH dehydrogenase ND05_RS23525 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ND05_RS23525 PF00361 Proton-conducting membrane transporter ND05_RS23535 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ND05_RS23540 PF00361 Proton-conducting membrane transporter ND05_RS23540 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ND05_RS23545 PF00374 Nickel-dependent hydrogenase ND05_RS23545 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ND05_RS23545 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ND05_RS23550 PF12838 4Fe-4S dicluster domain ND05_RS23555 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ND05_RS23560 PF07450 Formate hydrogenlyase maturation protein HycH ND05_RS23565 PF00158 Sigma-54 interaction domain ND05_RS23565 PF01590 GAF domain ND05_RS23570 PF01226 Formate/nitrite transporter ND05_RS23580 PF01594 AI-2E family transporter ND05_RS23585 PF01435 Peptidase family M48 ND05_RS23590 PF03960 ArsC family ND05_RS23595 PF00308 Bacterial dnaA protein ND05_RS23600 PF00860 Permease family ND05_RS23615 PF02769 AIR synthase related protein, C-terminal domain ND05_RS23615 PF00586 AIR synthase related protein, N-terminal domain ND05_RS23620 PF00551 Formyl transferase ND05_RS23625 PF13089 Polyphosphate kinase N-terminal domain ND05_RS23625 PF17941 Polyphosphate kinase C-terminal domain 1 ND05_RS23625 PF02503 Polyphosphate kinase middle domain ND05_RS23625 PF13090 Polyphosphate kinase C-terminal domain 2 ND05_RS23630 PF02541 Ppx/GppA phosphatase family ND05_RS23635 PF05231 MASE1 ND05_RS23635 PF00563 EAL domain ND05_RS23645 PF11119 Protein of unknown function (DUF2633) ND05_RS23655 PF05433 Glycine zipper 2TM domain ND05_RS23660 PF17358 Family of unknown function (DUF5384) ND05_RS23665 PF00117 Glutamine amidotransferase class-I ND05_RS23665 PF00958 GMP synthase C terminal domain ND05_RS23665 PF02540 NAD synthase ND05_RS23670 PF00478 IMP dehydrogenase / GMP reductase domain ND05_RS23670 PF00571 CBS domain ND05_RS23675 PF02601 Exonuclease VII, large subunit ND05_RS23675 PF13742 OB-fold nucleic acid binding domain ND05_RS23680 PF07191 zinc-ribbons ND05_RS23685 PF01926 50S ribosome-binding GTPase ND05_RS23685 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ND05_RS23690 PF13360 PQQ-like domain ND05_RS23695 PF09976 Tetratricopeptide repeat-like domain ND05_RS23700 PF13393 Histidyl-tRNA synthetase ND05_RS23700 PF03129 Anticodon binding domain ND05_RS23705 PF04551 GcpE protein ND05_RS23710 PF13464 Domain of unknown function (DUF4115) ND05_RS23720 PF04055 Radical SAM superfamily ND05_RS23725 PF00334 Nucleoside diphosphate kinase ND05_RS23730 PF00905 Penicillin binding protein transpeptidase domain ND05_RS23730 PF00912 Transglycosylase ND05_RS23730 PF06832 Penicillin-Binding Protein C-terminus Family ND05_RS23735 PF00207 Alpha-2-macroglobulin family ND05_RS23735 PF07703 Alpha-2-macroglobulin bait region domain ND05_RS23735 PF07678 A-macroglobulin TED domain ND05_RS23735 PF01835 MG2 domain ND05_RS23735 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ND05_RS23735 PF17962 Bacterial macroglobulin domain 6 ND05_RS23735 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ND05_RS23735 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ND05_RS23735 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain ND05_RS23740 PF00581 Rhodanese-like domain ND05_RS23745 PF07179 SseB protein N-terminal domain ND05_RS23745 PF14581 SseB protein C-terminal domain ND05_RS23750 PF00883 Cytosol aminopeptidase family, catalytic domain ND05_RS23750 PF12404 Peptidase ND05_RS23755 PF04384 Iron-sulphur cluster assembly ND05_RS23760 PF00111 2Fe-2S iron-sulfur cluster binding domain ND05_RS23765 PF00012 Hsp70 protein ND05_RS23770 PF07743 HSCB C-terminal oligomerisation domain ND05_RS23775 PF01521 Iron-sulphur cluster biosynthesis ND05_RS23780 PF01592 NifU-like N terminal domain ND05_RS23785 PF00266 Aminotransferase class-V ND05_RS23790 PF02082 Transcriptional regulator ND05_RS23795 PF00588 SpoU rRNA Methylase family ND05_RS23800 PF00459 Inositol monophosphatase family ND05_RS23805 PF12146 Serine aminopeptidase, S33 ND05_RS23810 PF00874 PRD domain ND05_RS23815 PF12832 MFS_1 like family ND05_RS23820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS23820 PF03466 LysR substrate binding domain ND05_RS23825 PF00355 Rieske [2Fe-2S] domain ND05_RS23825 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ND05_RS23830 PF00866 Ring hydroxylating beta subunit ND05_RS23835 PF00355 Rieske [2Fe-2S] domain ND05_RS23840 PF00106 short chain dehydrogenase ND05_RS23845 PF14759 Reductase C-terminal ND05_RS23845 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND05_RS23850 PF07681 DoxX ND05_RS23855 PF01263 Aldose 1-epimerase ND05_RS23860 PF08240 Alcohol dehydrogenase GroES-like domain ND05_RS23860 PF00107 Zinc-binding dehydrogenase ND05_RS23865 PF02653 Branched-chain amino acid transport system / permease component ND05_RS23870 PF00005 ABC transporter ND05_RS23875 PF13407 Periplasmic binding protein domain ND05_RS23880 PF17128 Domain of unknown function (DUF5107) ND05_RS23880 PF13181 Tetratricopeptide repeat ND05_RS23885 PF00480 ROK family ND05_RS23890 PF00464 Serine hydroxymethyltransferase ND05_RS23895 PF00042 Globin ND05_RS23895 PF00970 Oxidoreductase FAD-binding domain ND05_RS23895 PF00175 Oxidoreductase NAD-binding domain ND05_RS23900 PF00543 Nitrogen regulatory protein P-II ND05_RS23905 PF00158 Sigma-54 interaction domain ND05_RS23905 PF00072 Response regulator receiver domain ND05_RS23910 PF13942 YfhG lipoprotein ND05_RS23915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS23915 PF00512 His Kinase A (phospho-acceptor) domain ND05_RS23920 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ND05_RS23920 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ND05_RS23920 PF02769 AIR synthase related protein, C-terminal domain ND05_RS23925 PF01464 Transglycosylase SLT domain ND05_RS23925 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND05_RS23930 PF14437 MafB19-like deaminase ND05_RS23940 PF01418 Helix-turn-helix domain, rpiR family ND05_RS23940 PF01380 SIS domain ND05_RS23945 PF12838 4Fe-4S dicluster domain ND05_RS23965 PF01648 4'-phosphopantetheinyl transferase superfamily ND05_RS23970 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ND05_RS23975 PF02565 Recombination protein O C terminal ND05_RS23975 PF11967 Recombination protein O N terminal ND05_RS23980 PF01926 50S ribosome-binding GTPase ND05_RS23980 PF07650 KH domain ND05_RS23985 PF00035 Double-stranded RNA binding motif ND05_RS23985 PF14622 Ribonuclease-III-like ND05_RS24000 PF06421 GTP-binding protein LepA C-terminus ND05_RS24000 PF00009 Elongation factor Tu GTP binding domain ND05_RS24000 PF00679 Elongation factor G C-terminus ND05_RS24000 PF03144 Elongation factor Tu domain 2 ND05_RS24010 PF17188 MucB/RseB C-terminal domain ND05_RS24010 PF03888 MucB/RseB N-terminal domain ND05_RS24015 PF03873 Anti sigma-E protein RseA, C-terminal domain ND05_RS24015 PF03872 Anti sigma-E protein RseA, N-terminal domain ND05_RS24020 PF04542 Sigma-70 region 2 ND05_RS24020 PF08281 Sigma-70, region 4 ND05_RS24025 PF00890 FAD binding domain ND05_RS24025 PF02910 Fumarate reductase flavoprotein C-term ND05_RS24030 PF05175 Methyltransferase small domain ND05_RS24035 PF00270 DEAD/DEAH box helicase ND05_RS24035 PF00271 Helicase conserved C-terminal domain ND05_RS24040 PF03466 LysR substrate binding domain ND05_RS24040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS24045 PF01810 LysE type translocator ND05_RS24050 PF01228 Glycine radical ND05_RS24055 PF03167 Uracil DNA glycosylase superfamily ND05_RS24060 PF08032 RNA 2'-O ribose methyltransferase substrate binding ND05_RS24060 PF00588 SpoU rRNA Methylase family ND05_RS24070 PF00085 Thioredoxin ND05_RS24075 PF03942 DTW domain ND05_RS24080 PF13607 Succinyl-CoA ligase like flavodoxin domain ND05_RS24080 PF13380 CoA binding domain ND05_RS24080 PF00583 Acetyltransferase (GNAT) family ND05_RS24085 PF13091 PLD-like domain ND05_RS24090 PF10043 Predicted periplasmic lipoprotein (DUF2279) ND05_RS24095 PF00083 Sugar (and other) transporter ND05_RS24125 PF17871 AAA lid domain ND05_RS24125 PF02861 Clp amino terminal domain, pathogenicity island component ND05_RS24125 PF10431 C-terminal, D2-small domain, of ClpB protein ND05_RS24125 PF00004 ATPase family associated with various cellular activities (AAA) ND05_RS24125 PF07724 AAA domain (Cdc48 subfamily) ND05_RS24130 PF02578 Multi-copper polyphenol oxidoreductase laccase ND05_RS24135 PF01479 S4 domain ND05_RS24135 PF00849 RNA pseudouridylate synthase ND05_RS24140 PF13525 Outer membrane lipoprotein ND05_RS24150 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ND05_RS24160 PF01817 Chorismate mutase type II ND05_RS24160 PF00800 Prephenate dehydratase ND05_RS24165 PF01817 Chorismate mutase type II ND05_RS24165 PF02153 Prephenate dehydrogenase ND05_RS24170 PF00793 DAHP synthetase I family ND05_RS24175 PF10973 Protein of unknown function (DUF2799) ND05_RS24180 PF13689 YfiR/HmsC-like ND05_RS24190 PF00691 OmpA family ND05_RS24195 PF01245 Ribosomal protein L19 ND05_RS24200 PF01746 tRNA (Guanine-1)-methyltransferase ND05_RS24205 PF01782 RimM N-terminal domain ND05_RS24205 PF05239 PRC-barrel domain ND05_RS24210 PF00886 Ribosomal protein S16 ND05_RS24215 PF02978 Signal peptide binding domain ND05_RS24215 PF02881 SRP54-type protein, helical bundle domain ND05_RS24215 PF00448 SRP54-type protein, GTPase domain ND05_RS24220 PF01578 Cytochrome C assembly protein ND05_RS24225 PF00571 CBS domain ND05_RS24225 PF01595 Cyclin M transmembrane N-terminal domain ND05_RS24225 PF03471 Transporter associated domain ND05_RS24230 PF01025 GrpE ND05_RS24240 PF01513 ATP-NAD kinase ND05_RS24245 PF02463 RecF/RecN/SMC N terminal domain ND05_RS24250 PF04355 SmpA / OmlA family ND05_RS24255 PF03658 RnfH family Ubiquitin ND05_RS24260 PF03364 Polyketide cyclase / dehydrase and lipid transport ND05_RS24265 PF01668 SmpB protein ND05_RS24280 PF09019 EcoRII C terminal ND05_RS24280 PF09217 Restriction endonuclease EcoRII, N-terminal ND05_RS24285 PF18284 DNA methylase N-terminal domain ND05_RS24285 PF00145 C-5 cytosine-specific DNA methylase ND05_RS24295 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ND05_RS24300 PF07484 Phage Tail Collar Domain ND05_RS24300 PF08400 Prophage tail fibre N-terminal ND05_RS24300 PF03335 Phage tail fibre repeat ND05_RS24305 PF06316 Enterobacterial Ail/Lom protein ND05_RS24375 PF00574 Clp protease ND05_RS24405 PF03245 Bacteriophage Rz lysis protein ND05_RS24410 PF00959 Phage lysozyme ND05_RS24415 PF04971 Bacteriophage P21 holin S ND05_RS24420 PF01555 DNA methylase ND05_RS24435 PF03589 Antitermination protein ND05_RS24455 PF00717 Peptidase S24-like ND05_RS24455 PF01726 LexA DNA binding domain ND05_RS24460 PF06069 PerC transcriptional activator ND05_RS24475 PF09669 Phage regulatory protein Rha (Phage_pRha) ND05_RS24475 PF10549 ORF11CD3 domain ND05_RS24515 PF10065 Uncharacterized conserved protein (DUF2303) ND05_RS24540 PF00589 Phage integrase family ND05_RS24540 PF12167 Arm DNA-binding domain ND05_RS24545 PF09383 NIL domain ND05_RS24545 PF00005 ABC transporter ND05_RS24585 PF03335 Phage tail fibre repeat ND05_RS24585 PF08400 Prophage tail fibre N-terminal ND05_RS24585 PF07484 Phage Tail Collar Domain ND05_RS24590 PF06316 Enterobacterial Ail/Lom protein ND05_RS24600 PF00080 Copper/zinc superoxide dismutase (SODC) ND05_RS24700 PF13132 Domain of unknown function (DUF3950) ND05_RS24710 PF03245 Bacteriophage Rz lysis protein ND05_RS24720 PF00959 Phage lysozyme ND05_RS24725 PF07041 Protein of unknown function (DUF1327) ND05_RS24730 PF04971 Bacteriophage P21 holin S ND05_RS24740 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase ND05_RS24845 PF02899 Phage integrase, N-terminal SAM-like domain ND05_RS24845 PF00589 Phage integrase family ND05_RS24855 PF00589 Phage integrase family ND05_RS24855 PF02899 Phage integrase, N-terminal SAM-like domain ND05_RS24890 PF17621 Family of unknown function (DUF5508) ND05_RS24905 PF00128 Alpha amylase, catalytic domain ND05_RS24910 PF08943 CsiD ND05_RS24915 PF01266 FAD dependent oxidoreductase ND05_RS24920 PF00171 Aldehyde dehydrogenase family ND05_RS24925 PF00202 Aminotransferase class-III ND05_RS24930 PF00324 Amino acid permease ND05_RS24935 PF07729 FCD domain ND05_RS24935 PF00392 Bacterial regulatory proteins, gntR family ND05_RS24940 PF01476 LysM domain ND05_RS24940 PF04972 BON domain ND05_RS24945 PF01679 Proteolipid membrane potential modulator ND05_RS24950 PF01022 Bacterial regulatory protein, arsR family ND05_RS24955 PF11127 Protein of unknown function (DUF2892) ND05_RS24955 PF00581 Rhodanese-like domain ND05_RS24960 PF00816 H-NS histone family ND05_RS24965 PF06610 L-alanine exporter ND05_RS24970 PF09400 Protein of unknown function (DUF2002) ND05_RS24975 PF05957 Bacterial protein of unknown function (DUF883) ND05_RS24980 PF00462 Glutaredoxin ND05_RS24985 PF07972 NrdI Flavodoxin like ND05_RS24990 PF08343 Ribonucleotide reductase N-terminal ND05_RS24990 PF00317 Ribonucleotide reductase, all-alpha domain ND05_RS24990 PF02867 Ribonucleotide reductase, barrel domain ND05_RS24995 PF00268 Ribonucleotide reductase, small chain ND05_RS25000 PF00005 ABC transporter ND05_RS25000 PF00571 CBS domain ND05_RS25005 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS25010 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ND05_RS25015 PF07690 Major Facilitator Superfamily ND05_RS25020 PF03591 AzlC protein ND05_RS25025 PF05437 Branched-chain amino acid transport protein (AzlD) ND05_RS25030 PF01047 MarR family ND05_RS25035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND05_RS25035 PF00529 HlyD membrane-fusion protein of T1SS ND05_RS25040 PF07690 Major Facilitator Superfamily ND05_RS25045 PF02664 S-Ribosylhomocysteinase (LuxS) ND05_RS25050 PF04262 Glutamate-cysteine ligase ND05_RS25055 PF09335 SNARE associated Golgi protein ND05_RS25060 PF13419 Haloacid dehalogenase-like hydrolase ND05_RS25090 PF02599 Global regulator protein family ND05_RS25095 PF02272 DHHA1 domain ND05_RS25095 PF01411 tRNA synthetases class II (A) ND05_RS25095 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ND05_RS25100 PF02631 RecX family ND05_RS25105 PF00154 recA bacterial DNA recombination protein ND05_RS25110 PF02464 Competence-damaged protein ND05_RS25115 PF13406 Transglycosylase SLT domain ND05_RS25120 PF03608 PTS system enzyme II sorbitol-specific factor ND05_RS25125 PF07663 Sorbitol phosphotransferase enzyme II C-terminus ND05_RS25125 PF03612 Sorbitol phosphotransferase enzyme II N-terminus ND05_RS25130 PF03829 PTS system glucitol/sorbitol-specific IIA component ND05_RS25135 PF00106 short chain dehydrogenase ND05_RS25140 PF06923 Glucitol operon activator protein (GutM) ND05_RS25145 PF00455 DeoR C terminal sensor domain ND05_RS25145 PF08220 DeoR-like helix-turn-helix domain ND05_RS25150 PF00571 CBS domain ND05_RS25150 PF01380 SIS domain ND05_RS25155 PF00158 Sigma-54 interaction domain ND05_RS25155 PF01590 GAF domain ND05_RS25160 PF00753 Metallo-beta-lactamase superfamily ND05_RS25160 PF00258 Flavodoxin ND05_RS25160 PF00301 Rubredoxin ND05_RS25165 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND05_RS25165 PF18113 Rubredoxin binding C-terminal domain ND05_RS25170 PF07503 HypF finger ND05_RS25170 PF17788 HypF Kae1-like domain ND05_RS25170 PF00708 Acylphosphatase ND05_RS25170 PF01300 Telomere recombination ND05_RS25175 PF12800 4Fe-4S binding domain ND05_RS25175 PF13247 4Fe-4S dicluster domain ND05_RS25180 PF00356 Bacterial regulatory proteins, lacI family ND05_RS25185 PF00367 phosphotransferase system, EIIB ND05_RS25185 PF02378 Phosphotransferase system, EIIC ND05_RS25190 PF00232 Glycosyl hydrolase family 1 ND05_RS25195 PF01381 Helix-turn-helix ND05_RS25200 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system ND05_RS25210 PF01750 Hydrogenase maturation protease ND05_RS25215 PF07450 Formate hydrogenlyase maturation protein HycH ND05_RS25220 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ND05_RS25225 PF12838 4Fe-4S dicluster domain ND05_RS25230 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ND05_RS25230 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ND05_RS25230 PF00374 Nickel-dependent hydrogenase ND05_RS25235 PF00146 NADH dehydrogenase ND05_RS25240 PF00361 Proton-conducting membrane transporter ND05_RS25245 PF13247 4Fe-4S dicluster domain ND05_RS25250 PF11046 Transcriptional repressor of hyc and hyp operons ND05_RS25255 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ND05_RS25260 PF02492 CobW/HypB/UreG, nucleotide-binding domain ND05_RS25265 PF01455 HupF/HypC family ND05_RS25270 PF01924 Hydrogenase formation hypA family ND05_RS25275 PF00586 AIR synthase related protein, N-terminal domain ND05_RS25275 PF02769 AIR synthase related protein, C-terminal domain ND05_RS25280 PF00158 Sigma-54 interaction domain ND05_RS25280 PF01590 GAF domain ND05_RS25285 PF11756 Nitrous oxide-stimulated promoter ND05_RS25290 PF05188 MutS domain II ND05_RS25290 PF05192 MutS domain III ND05_RS25290 PF00488 MutS domain V ND05_RS25290 PF05190 MutS family domain IV ND05_RS25290 PF01624 MutS domain I ND05_RS25295 PF00149 Calcineurin-like phosphoesterase ND05_RS25300 PF00455 DeoR C terminal sensor domain ND05_RS25300 PF08220 DeoR-like helix-turn-helix domain ND05_RS25305 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ND05_RS25305 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ND05_RS25310 PF07005 Sugar-binding N-terminal domain ND05_RS25310 PF17042 Nucleotide-binding C-terminal domain ND05_RS25315 PF00596 Class II Aldolase and Adducin N-terminal domain ND05_RS25320 PF01261 Xylose isomerase-like TIM barrel ND05_RS25325 PF02447 GntP family permease ND05_RS25335 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ND05_RS25340 PF02441 Flavoprotein ND05_RS25345 PF01047 MarR family ND05_RS25350 PF04545 Sigma-70, region 4 ND05_RS25350 PF04539 Sigma-70 region 3 ND05_RS25350 PF04542 Sigma-70 region 2 ND05_RS25350 PF00140 Sigma-70 factor, region 1.2 ND05_RS25355 PF01476 LysM domain ND05_RS25355 PF01551 Peptidase family M23 ND05_RS25365 PF01975 Survival protein SurE ND05_RS25370 PF01142 tRNA pseudouridine synthase D (TruD) ND05_RS25375 PF02542 YgbB family ND05_RS25380 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ND05_RS25385 PF04977 Septum formation initiator ND05_RS25390 PF12084 Protein of unknown function (DUF3561) ND05_RS25400 PF00009 Elongation factor Tu GTP binding domain ND05_RS25405 PF01507 Phosphoadenosine phosphosulfate reductase family ND05_RS25410 PF04389 Peptidase family M28 ND05_RS25415 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) ND05_RS25420 PF01867 CRISPR associated protein Cas1 ND05_RS25430 PF09704 CRISPR-associated protein (Cas_Cas5) ND05_RS25435 PF09344 CT1975-like protein ND05_RS25445 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) ND05_RS25465 PF01848 Hok/gef family ND05_RS25475 PF01507 Phosphoadenosine phosphosulfate reductase family ND05_RS25480 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ND05_RS25480 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ND05_RS25485 PF00667 FAD binding domain ND05_RS25485 PF00258 Flavodoxin ND05_RS25485 PF00175 Oxidoreductase NAD-binding domain ND05_RS25490 PF01242 6-pyruvoyl tetrahydropterin synthase ND05_RS25495 PF01266 FAD dependent oxidoreductase ND05_RS25505 PF04309 Glycerol-3-phosphate responsive antiterminator ND05_RS25510 PF01012 Electron transfer flavoprotein domain ND05_RS25510 PF00766 Electron transfer flavoprotein FAD-binding domain ND05_RS25515 PF01012 Electron transfer flavoprotein domain ND05_RS25520 PF00083 Sugar (and other) transporter ND05_RS25525 PF01565 FAD binding domain ND05_RS25525 PF02913 FAD linked oxidases, C-terminal domain ND05_RS25535 PF07690 Major Facilitator Superfamily ND05_RS25540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ND05_RS25540 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ND05_RS25545 PF04055 Radical SAM superfamily ND05_RS25560 PF00113 Enolase, C-terminal TIM barrel domain ND05_RS25560 PF03952 Enolase, N-terminal domain ND05_RS25565 PF06418 CTP synthase N-terminus ND05_RS25565 PF00117 Glutamine amidotransferase class-I ND05_RS25570 PF03819 MazG nucleotide pyrophosphohydrolase domain ND05_RS25575 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ND05_RS25580 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ND05_RS25585 PF02824 TGS domain ND05_RS25585 PF13291 ACT domain ND05_RS25585 PF04607 Region found in RelA / SpoT proteins ND05_RS25590 PF05958 tRNA (Uracil-5-)-methyltransferase ND05_RS25590 PF01938 TRAM domain ND05_RS25595 PF01627 Hpt domain ND05_RS25595 PF00072 Response regulator receiver domain ND05_RS25595 PF00512 His Kinase A (phospho-acceptor) domain ND05_RS25595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS25595 PF00672 HAMP domain ND05_RS25595 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ND05_RS25600 PF13378 Enolase C-terminal domain-like ND05_RS25605 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ND05_RS25605 PF13378 Enolase C-terminal domain-like ND05_RS25610 PF07690 Major Facilitator Superfamily ND05_RS25615 PF00258 Flavodoxin ND05_RS25620 PF00849 RNA pseudouridylate synthase ND05_RS25625 PF04287 tRNA pseudouridine synthase C ND05_RS25630 PF07348 Syd protein (SUKH-2) ND05_RS25635 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ND05_RS25635 PF14489 QueF-like protein ND05_RS25640 PF11892 Domain of unknown function (DUF3412) ND05_RS25640 PF03641 Possible lysine decarboxylase ND05_RS25640 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ND05_RS25650 PF03315 Serine dehydratase beta chain ND05_RS25650 PF03313 Serine dehydratase alpha chain ND05_RS25655 PF01367 5'-3' exonuclease, C-terminal SAM fold ND05_RS25655 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ND05_RS25660 PF00465 Iron-containing alcohol dehydrogenase ND05_RS25665 PF00596 Class II Aldolase and Adducin N-terminal domain ND05_RS25670 PF07690 Major Facilitator Superfamily ND05_RS25675 PF07882 L-fucose isomerase, second N-terminal domain ND05_RS25675 PF07881 L-fucose isomerase, first N-terminal domain ND05_RS25675 PF02952 L-fucose isomerase, C-terminal domain ND05_RS25680 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ND05_RS25680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ND05_RS25685 PF05025 RbsD / FucU transport protein family ND05_RS25690 PF08220 DeoR-like helix-turn-helix domain ND05_RS25690 PF00455 DeoR C terminal sensor domain ND05_RS25695 PF18125 RlmM ferredoxin-like domain ND05_RS25695 PF01728 FtsJ-like methyltransferase ND05_RS25700 PF04241 Protein of unknown function (DUF423) ND05_RS25705 PF03466 LysR substrate binding domain ND05_RS25705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS25710 PF06004 Bacterial protein of unknown function (DUF903) ND05_RS25715 PF00266 Aminotransferase class-V ND05_RS25720 PF02657 Fe-S metabolism associated domain ND05_RS25725 PF00899 ThiF family ND05_RS25730 PF03562 MltA specific insert domain ND05_RS25730 PF06725 3D domain ND05_RS25755 PF01520 N-acetylmuramoyl-L-alanine amidase ND05_RS25755 PF11741 AMIN domain ND05_RS25765 PF00583 Acetyltransferase (GNAT) family ND05_RS25765 PF00696 Amino acid kinase family ND05_RS25770 PF13538 UvrD-like helicase C-terminal domain ND05_RS25775 PF13361 UvrD-like helicase C-terminal domain ND05_RS25775 PF12705 PD-(D/E)XK nuclease superfamily ND05_RS25775 PF00580 UvrD/REP helicase N-terminal domain ND05_RS25780 PF16187 Middle or third domain of peptidase_M16 ND05_RS25780 PF00675 Insulinase (Peptidase family M16) ND05_RS25780 PF05193 Peptidase M16 inactive domain ND05_RS25785 PF17946 RecC C-terminal domain ND05_RS25790 PF07963 Prokaryotic N-terminal methylation motif ND05_RS25790 PF12528 Type II secretion prepilin peptidase dependent protein C ND05_RS25795 PF10713 Protein of unknown function (DUF2509) ND05_RS25800 PF07963 Prokaryotic N-terminal methylation motif ND05_RS25805 PF07963 Prokaryotic N-terminal methylation motif ND05_RS25810 PF00303 Thymidylate synthase ND05_RS25815 PF01790 Prolipoprotein diacylglyceryl transferase ND05_RS25820 PF02896 PEP-utilising enzyme, TIM barrel domain ND05_RS25820 PF01590 GAF domain ND05_RS25820 PF05524 PEP-utilising enzyme, N-terminal ND05_RS25820 PF00391 PEP-utilising enzyme, mobile domain ND05_RS25825 PF00293 NUDIX domain ND05_RS25830 PF02976 DNA mismatch repair enzyme MutH ND05_RS25835 PF03741 Integral membrane protein TerC family ND05_RS25840 PF06004 Bacterial protein of unknown function (DUF903) ND05_RS25845 PF00248 Aldo/keto reductase family ND05_RS25850 PF07690 Major Facilitator Superfamily ND05_RS25855 PF01553 Acyltransferase ND05_RS25855 PF00501 AMP-binding enzyme ND05_RS25860 PF00356 Bacterial regulatory proteins, lacI family ND05_RS25865 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ND05_RS25865 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ND05_RS25870 PF03466 LysR substrate binding domain ND05_RS25870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS25875 PF01177 Asp/Glu/Hydantoin racemase ND05_RS25880 PF00083 Sugar (and other) transporter ND05_RS25890 PF04962 KduI/IolB family ND05_RS25895 PF00108 Thiolase, N-terminal domain ND05_RS25895 PF02803 Thiolase, C-terminal domain ND05_RS25900 PF03222 Tryptophan/tyrosine permease family ND05_RS25920 PF01476 LysM domain ND05_RS25920 PF01551 Peptidase family M23 ND05_RS25930 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ND05_RS25930 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ND05_RS25935 PF00941 FAD binding domain in molybdopterin dehydrogenase ND05_RS25935 PF03450 CO dehydrogenase flavoprotein C-terminal domain ND05_RS25940 PF00111 2Fe-2S iron-sulfur cluster binding domain ND05_RS25940 PF01799 [2Fe-2S] binding domain ND05_RS25945 PF00158 Sigma-54 interaction domain ND05_RS25945 PF13188 PAS domain ND05_RS25945 PF02954 Bacterial regulatory protein, Fis family ND05_RS25950 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ND05_RS25950 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ND05_RS25955 PF00291 Pyridoxal-phosphate dependent enzyme ND05_RS25960 PF01546 Peptidase family M20/M25/M40 ND05_RS25960 PF07687 Peptidase dimerisation domain ND05_RS25965 PF01979 Amidohydrolase family ND05_RS25970 PF00696 Amino acid kinase family ND05_RS25975 PF02625 XdhC and CoxI family ND05_RS25975 PF13478 XdhC Rossmann domain ND05_RS25985 PF12804 MobA-like NTP transferase domain ND05_RS25990 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ND05_RS25990 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND05_RS25995 PF01979 Amidohydrolase family ND05_RS26000 PF00941 FAD binding domain in molybdopterin dehydrogenase ND05_RS26005 PF01799 [2Fe-2S] binding domain ND05_RS26005 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ND05_RS26005 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ND05_RS26010 PF00860 Permease family ND05_RS26015 PF01979 Amidohydrolase family ND05_RS26020 PF00860 Permease family ND05_RS26025 PF13247 4Fe-4S dicluster domain ND05_RS26030 PF13247 4Fe-4S dicluster domain ND05_RS26030 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ND05_RS26030 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND05_RS26040 PF00860 Permease family ND05_RS26050 PF00293 NUDIX domain ND05_RS26055 PF01336 OB-fold nucleic acid binding domain ND05_RS26055 PF00152 tRNA synthetases class II (D, K and N) ND05_RS26065 PF17768 RecJ OB domain ND05_RS26065 PF02272 DHHA1 domain ND05_RS26065 PF01368 DHH family ND05_RS26070 PF10411 Disulfide bond isomerase protein N-terminus ND05_RS26070 PF13098 Thioredoxin-like domain ND05_RS26075 PF02899 Phage integrase, N-terminal SAM-like domain ND05_RS26075 PF00589 Phage integrase family ND05_RS26080 PF00258 Flavodoxin ND05_RS26085 PF07254 Membrane-bound toxin component of toxin-antitoxin system ND05_RS26090 PF03937 Flavinator of succinate dehydrogenase ND05_RS26095 PF01571 Aminomethyltransferase folate-binding domain ND05_RS26100 PF03006 Haemolysin-III related ND05_RS26105 PF04266 ASCH domain ND05_RS26110 PF00232 Glycosyl hydrolase family 1 ND05_RS26120 PF02347 Glycine cleavage system P-protein ND05_RS26125 PF01597 Glycine cleavage H-protein ND05_RS26130 PF08669 Glycine cleavage T-protein C-terminal barrel domain ND05_RS26130 PF01571 Aminomethyltransferase folate-binding domain ND05_RS26135 PF01494 FAD binding domain ND05_RS26140 PF01494 FAD binding domain ND05_RS26145 PF00557 Metallopeptidase family M24 ND05_RS26145 PF05195 Aminopeptidase P, N-terminal domain ND05_RS26150 PF03695 Uncharacterised protein family (UPF0149) ND05_RS26160 PF05164 Cell division protein ZapA ND05_RS26170 PF01812 5-formyltetrahydrofolate cyclo-ligase family ND05_RS26190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ND05_RS26190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ND05_RS26190 PF01842 ACT domain ND05_RS26195 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ND05_RS26205 PF03466 LysR substrate binding domain ND05_RS26205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS26210 PF02310 B12 binding domain ND05_RS26210 PF01642 Methylmalonyl-CoA mutase ND05_RS26220 PF00378 Enoyl-CoA hydratase/isomerase ND05_RS26225 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ND05_RS26225 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ND05_RS26230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS26230 PF03466 LysR substrate binding domain ND05_RS26235 PF04402 Protein of unknown function (DUF541) ND05_RS26240 PF01810 LysE type translocator ND05_RS26245 PF00924 Mechanosensitive ion channel ND05_RS26245 PF05552 Conserved TM helix ND05_RS26255 PF01116 Fructose-bisphosphate aldolase class-II ND05_RS26260 PF00162 Phosphoglycerate kinase ND05_RS26265 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ND05_RS26265 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ND05_RS26290 PF00005 ABC transporter ND05_RS26295 PF00005 ABC transporter ND05_RS26305 PF05068 Mannitol repressor ND05_RS26310 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ND05_RS26315 PF08240 Alcohol dehydrogenase GroES-like domain ND05_RS26315 PF00107 Zinc-binding dehydrogenase ND05_RS26320 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ND05_RS26320 PF02378 Phosphotransferase system, EIIC ND05_RS26325 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND05_RS26330 PF02780 Transketolase, C-terminal domain ND05_RS26330 PF02779 Transketolase, pyrimidine binding domain ND05_RS26330 PF00456 Transketolase, thiamine diphosphate binding domain ND05_RS26335 PF01435 Peptidase family M48 ND05_RS26345 PF00491 Arginase family ND05_RS26350 PF17944 Arginine decarboxylase C-terminal helical extension ND05_RS26350 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ND05_RS26350 PF17810 Arginine decarboxylase helical bundle domain ND05_RS26355 PF11036 Virulence promoting factor ND05_RS26360 PF17430 Uncharacterized YqgC-like ND05_RS26370 PF02773 S-adenosylmethionine synthetase, C-terminal domain ND05_RS26370 PF02772 S-adenosylmethionine synthetase, central domain ND05_RS26370 PF00438 S-adenosylmethionine synthetase, N-terminal domain ND05_RS26375 PF00083 Sugar (and other) transporter ND05_RS26380 PF17283 SprT-like zinc ribbon domain ND05_RS26380 PF10263 SprT-like family ND05_RS26385 PF04231 Endonuclease I ND05_RS26390 PF04452 RNA methyltransferase ND05_RS26395 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ND05_RS26395 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ND05_RS26400 PF02622 Uncharacterized ACR, COG1678 ND05_RS26405 PF03652 Holliday junction resolvase ND05_RS26410 PF00437 Type II/IV secretion system protein ND05_RS26415 PF01168 Alanine racemase, N-terminal domain ND05_RS26420 PF02325 YGGT family ND05_RS26425 PF02594 Uncharacterised ACR, YggU family COG1872 ND05_RS26430 PF01725 Ham1 family ND05_RS26435 PF06969 HemN C-terminal domain ND05_RS26435 PF04055 Radical SAM superfamily ND05_RS26440 PF03480 Bacterial extracellular solute-binding protein, family 7 ND05_RS26445 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ND05_RS26450 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ND05_RS26455 PF06717 Protein of unknown function (DUF1202) ND05_RS26460 PF17763 Glutaminase/Asparaginase C-terminal domain ND05_RS26460 PF00710 Asparaginase, N-terminal ND05_RS26465 PF11101 Protein of unknown function (DUF2884) ND05_RS26470 PF04320 Protein with unknown function (DUF469) ND05_RS26475 PF02390 Putative methyltransferase ND05_RS26485 PF14815 NUDIX domain ND05_RS26485 PF00730 HhH-GPD superfamily base excision DNA repair protein ND05_RS26485 PF00633 Helix-hairpin-helix motif ND05_RS26485 PF10576 Iron-sulfur binding domain of endonuclease III ND05_RS26490 PF04362 Bacterial Fe(2+) trafficking ND05_RS26495 PF01464 Transglycosylase SLT domain ND05_RS26495 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ND05_RS26500 PF03825 Nucleoside H+ symporter ND05_RS26505 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ND05_RS26505 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ND05_RS26505 PF01276 Orn/Lys/Arg decarboxylase, major domain ND05_RS26515 PF04474 Protein of unknown function (DUF554) ND05_RS26525 PF00589 Phage integrase family ND05_RS26525 PF13356 Arm DNA-binding domain ND05_RS26530 PF03050 Transposase IS66 family ND05_RS26530 PF13007 Transposase C of IS166 homeodomain ND05_RS26530 PF13005 zinc-finger binding domain of transposase IS66 ND05_RS26530 PF13817 IS66 C-terminal element ND05_RS26540 PF05717 IS66 Orf2 like protein ND05_RS26545 PF13007 Transposase C of IS166 homeodomain ND05_RS26545 PF13005 zinc-finger binding domain of transposase IS66 ND05_RS26545 PF13817 IS66 C-terminal element ND05_RS26545 PF03050 Transposase IS66 family ND05_RS26555 PF02796 Helix-turn-helix domain of resolvase ND05_RS26555 PF00665 Integrase core domain ND05_RS26570 PF05717 IS66 Orf2 like protein ND05_RS26580 PF04002 RadC-like JAB domain ND05_RS26585 PF06174 Protein of unknown function (DUF987) ND05_RS26590 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A ND05_RS26595 PF06755 CbtA_toxin of type IV toxin-antitoxin system ND05_RS26610 PF03050 Transposase IS66 family ND05_RS26610 PF13005 zinc-finger binding domain of transposase IS66 ND05_RS26610 PF13817 IS66 C-terminal element ND05_RS26610 PF13007 Transposase C of IS166 homeodomain ND05_RS26615 PF05717 IS66 Orf2 like protein ND05_RS26680 PF05802 Enterobacterial EspB protein ND05_RS26695 PF07201 HrpJ-like domain ND05_RS26705 PF01476 LysM domain ND05_RS26705 PF11924 Inverse autotransporter, beta-domain ND05_RS26705 PF02369 Bacterial Ig-like domain (group 1) ND05_RS26705 PF07979 Intimin C-type lectin domain ND05_RS26710 PF05932 Tir chaperone protein (CesT) family ND05_RS26715 PF07489 Translocated intimin receptor (Tir) C-terminus ND05_RS26715 PF03549 Translocated intimin receptor (Tir) intimin-binding domain ND05_RS26715 PF07490 Translocated intimin receptor (Tir) N-terminus ND05_RS26750 PF18269 T3SS EscN ATPase C-terminal domain ND05_RS26750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ND05_RS26750 PF02874 ATP synthase alpha/beta family, beta-barrel domain ND05_RS26755 PF00771 FHIPEP family ND05_RS26775 PF01514 Secretory protein of YscJ/FliF family ND05_RS26785 PF00263 Bacterial type II and III secretion system protein ND05_RS26785 PF03958 Bacterial type II/III secretion system short domain ND05_RS26805 PF01464 Transglycosylase SLT domain ND05_RS26810 PF01312 FlhB HrpN YscU SpaS Family ND05_RS26815 PF01311 Bacterial export proteins, family 1 ND05_RS26820 PF01313 Bacterial export proteins, family 3 ND05_RS26825 PF00813 FliP family ND05_RS26885 PF06067 Domain of unknown function (DUF932) ND05_RS26895 PF03230 Antirestriction protein ND05_RS26900 PF04002 RadC-like JAB domain ND05_RS26905 PF06174 Protein of unknown function (DUF987) ND05_RS26910 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A ND05_RS26915 PF06755 CbtA_toxin of type IV toxin-antitoxin system ND05_RS26935 PF04612 Type II secretion system (T2SS), protein M ND05_RS26940 PF12693 GspL periplasmic domain ND05_RS26945 PF03934 Type II secretion system (T2SS), protein K ND05_RS26950 PF07963 Prokaryotic N-terminal methylation motif ND05_RS26950 PF11612 Type II secretion system (T2SS), protein J ND05_RS26955 PF07963 Prokaryotic N-terminal methylation motif ND05_RS26955 PF02501 Type II secretion system (T2SS), protein I ND05_RS26960 PF12019 Type II transport protein GspH ND05_RS26965 PF08334 Type II secretion system (T2SS), protein G ND05_RS26965 PF07963 Prokaryotic N-terminal methylation motif ND05_RS26970 PF00482 Type II secretion system (T2SS), protein F ND05_RS26975 PF00437 Type II/IV secretion system protein ND05_RS26980 PF03958 Bacterial type II/III secretion system short domain ND05_RS26980 PF00263 Bacterial type II and III secretion system protein ND05_RS26985 PF11356 Type II secretion system protein C ND05_RS26990 PF16549 Type II secretion system (T2SS) pilotin, S protein ND05_RS26995 PF06750 Bacterial Peptidase A24 N-terminal domain ND05_RS26995 PF01478 Type IV leader peptidase family ND05_RS27000 PF17291 N-terminal domain of M60-like peptidases ND05_RS27000 PF13402 Peptidase M60, enhancin and enhancin-like ND05_RS27000 PF13322 Domain of unknown function (DUF4092) ND05_RS27010 PF02652 L-lactate permease ND05_RS27015 PF01274 Malate synthase ND05_RS27020 PF03928 Haem-degrading ND05_RS27025 PF02754 Cysteine-rich domain ND05_RS27025 PF13183 4Fe-4S dicluster domain ND05_RS27030 PF01565 FAD binding domain ND05_RS27035 PF02913 FAD linked oxidases, C-terminal domain ND05_RS27035 PF01565 FAD binding domain ND05_RS27040 PF00392 Bacterial regulatory proteins, gntR family ND05_RS27040 PF07729 FCD domain ND05_RS27055 PF00501 AMP-binding enzyme ND05_RS27055 PF14535 AMP-binding enzyme C-terminal domain ND05_RS27095 PF03739 Lipopolysaccharide export system permease LptF/LptG ND05_RS27100 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ND05_RS27110 PF01943 Polysaccharide biosynthesis protein ND05_RS27130 PF01384 Phosphate transporter family ND05_RS27135 PF05257 CHAP domain ND05_RS27135 PF03738 Glutathionylspermidine synthase preATP-grasp ND05_RS27140 PF02798 Glutathione S-transferase, N-terminal domain ND05_RS27145 PF01455 HupF/HypC family ND05_RS27150 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ND05_RS27155 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE ND05_RS27160 PF01750 Hydrogenase maturation protease ND05_RS27165 PF00374 Nickel-dependent hydrogenase ND05_RS27170 PF03916 Polysulphide reductase, NrfD ND05_RS27175 PF13247 4Fe-4S dicluster domain ND05_RS27180 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ND05_RS27180 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ND05_RS27190 PF11115 Protein of unknown function (DUF2623) ND05_RS27195 PF01738 Dienelactone hydrolase family ND05_RS27200 PF00248 Aldo/keto reductase family ND05_RS27205 PF03350 Uncharacterized protein family, UPF0114 ND05_RS27215 PF02472 Biopolymer transport protein ExbD/TolR ND05_RS27220 PF01618 MotA/TolQ/ExbB proton channel family ND05_RS27230 PF01053 Cys/Met metabolism PLP-dependent enzyme ND05_RS27235 PF09335 SNARE associated Golgi protein ND05_RS27240 PF12833 Helix-turn-helix domain ND05_RS27240 PF06719 AraC-type transcriptional regulator N-terminus ND05_RS27245 PF00465 Iron-containing alcohol dehydrogenase ND05_RS27250 PF00248 Aldo/keto reductase family ND05_RS27255 PF12883 Protein of unknown function (DUF3828) ND05_RS27260 PF12883 Protein of unknown function (DUF3828) ND05_RS27265 PF04728 Lipoprotein leucine-zipper ND05_RS27270 PF08497 Radical SAM N-terminal ND05_RS27270 PF04055 Radical SAM superfamily ND05_RS27270 PF11842 Domain of unknown function (DUF3362) ND05_RS27275 PF00394 Multicopper oxidase ND05_RS27275 PF07732 Multicopper oxidase ND05_RS27275 PF07731 Multicopper oxidase ND05_RS27280 PF01553 Acyltransferase ND05_RS27285 PF03989 DNA gyrase C-terminal domain, beta-propeller ND05_RS27285 PF00521 DNA gyrase/topoisomerase IV, subunit A ND05_RS27295 PF06445 GyrI-like small molecule binding domain ND05_RS27300 PF04076 Bacterial OB fold (BOF) protein ND05_RS27305 PF00486 Transcriptional regulatory protein, C terminal ND05_RS27305 PF00072 Response regulator receiver domain ND05_RS27310 PF08521 Two-component sensor kinase N-terminal ND05_RS27310 PF00512 His Kinase A (phospho-acceptor) domain ND05_RS27310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS27315 PF10840 Protein of unknown function (DUF2645) ND05_RS27325 PF02525 Flavodoxin-like fold ND05_RS27330 PF03992 Antibiotic biosynthesis monooxygenase ND05_RS27335 PF00986 DNA gyrase B subunit, carboxyl terminus ND05_RS27335 PF00204 DNA gyrase B ND05_RS27335 PF01751 Toprim domain ND05_RS27335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS27340 PF05728 Uncharacterised protein family (UPF0227) ND05_RS27345 PF00149 Calcineurin-like phosphoesterase ND05_RS27350 PF06853 Protein of unknown function (DUF1249) ND05_RS27355 PF00293 NUDIX domain ND05_RS27360 PF02321 Outer membrane efflux protein ND05_RS27370 PF06693 Protein of unknown function (DUF1190) ND05_RS27375 PF03738 Glutathionylspermidine synthase preATP-grasp ND05_RS27380 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ND05_RS27385 PF02535 ZIP Zinc transporter ND05_RS27395 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ND05_RS27400 PF04380 Membrane fusogenic activity ND05_RS27405 PF00419 Fimbrial protein ND05_RS27410 PF13954 PapC N-terminal domain ND05_RS27410 PF00577 Outer membrane usher protein ND05_RS27410 PF13953 PapC C-terminal domain ND05_RS27425 PF08971 Glycogen synthesis protein ND05_RS27430 PF07290 Protein of unknown function (DUF1449) ND05_RS27435 PF01145 SPFH domain / Band 7 family ND05_RS27435 PF15975 Flotillin ND05_RS27460 PF01467 Cytidylyltransferase-like ND05_RS27460 PF00294 pfkB family carbohydrate kinase ND05_RS27465 PF03710 Glutamate-ammonia ligase adenylyltransferase ND05_RS27465 PF08335 GlnD PII-uridylyltransferase ND05_RS27470 PF01928 CYTH domain ND05_RS27480 PF08239 Bacterial SH3 domain ND05_RS27485 PF01743 Poly A polymerase head domain ND05_RS27485 PF01966 HD domain ND05_RS27485 PF12627 Probable RNA and SrmB- binding site of polymerase A ND05_RS27490 PF02673 Bacitracin resistance protein BacA ND05_RS27495 PF02152 Dihydroneopterin aldolase ND05_RS27500 PF02660 Glycerol-3-phosphate acyltransferase ND05_RS27505 PF03466 LysR substrate binding domain ND05_RS27505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS27515 PF05681 Fumarate hydratase (Fumerase) ND05_RS27520 PF05683 Fumarase C-terminus ND05_RS27525 PF00939 Sodium:sulfate symporter transmembrane region ND05_RS27530 PF00814 Glycoprotease family ND05_RS27540 PF01165 Ribosomal protein S21 ND05_RS27545 PF01807 CHC2 zinc finger ND05_RS27545 PF08275 DNA primase catalytic core, N-terminal domain ND05_RS27545 PF08278 DNA primase DnaG DnaB-binding ND05_RS27545 PF10410 DnaB-helicase binding domain of primase ND05_RS27555 PF04539 Sigma-70 region 3 ND05_RS27555 PF04542 Sigma-70 region 2 ND05_RS27555 PF00140 Sigma-70 factor, region 1.2 ND05_RS27555 PF03979 Sigma-70 factor, region 1.1 ND05_RS27555 PF04546 Sigma-70, non-essential region ND05_RS27555 PF04545 Sigma-70, region 4 ND05_RS27560 PF03167 Uracil DNA glycosylase superfamily ND05_RS27585 PF06755 CbtA_toxin of type IV toxin-antitoxin system ND05_RS27590 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A ND05_RS27595 PF06174 Protein of unknown function (DUF987) ND05_RS27600 PF04002 RadC-like JAB domain ND05_RS27605 PF03230 Antirestriction protein ND05_RS27615 PF06067 Domain of unknown function (DUF932) ND05_RS27620 PF01348 Type II intron maturase ND05_RS27620 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ND05_RS27660 PF13990 YjcZ-like protein ND05_RS27665 PF00350 Dynamin family ND05_RS27695 PF05717 IS66 Orf2 like protein ND05_RS27710 PF02342 TerD domain ND05_RS27715 PF02342 TerD domain ND05_RS27720 PF03741 Integral membrane protein TerC family ND05_RS27725 PF05099 Tellurite resistance protein TerB ND05_RS27730 PF02342 TerD domain ND05_RS27735 PF02342 TerD domain ND05_RS27755 PF11202 Phosphoribosyl transferase (PRTase) ND05_RS27755 PF15608 PELOTA RNA binding domain ND05_RS27790 PF13005 zinc-finger binding domain of transposase IS66 ND05_RS27790 PF13817 IS66 C-terminal element ND05_RS27790 PF03050 Transposase IS66 family ND05_RS27790 PF13007 Transposase C of IS166 homeodomain ND05_RS27835 PF01197 Ribosomal protein L31 ND05_RS27860 PF01219 Prokaryotic diacylglycerol kinase ND05_RS27865 PF08019 Phosphoethanolamine transferase EptA/EptB ND05_RS27865 PF00884 Sulfatase ND05_RS27885 PF04264 YceI-like domain ND05_RS27895 PF00547 Urease, gamma subunit ND05_RS27900 PF00699 Urease beta subunit ND05_RS27905 PF01979 Amidohydrolase family ND05_RS27905 PF00449 Urease alpha-subunit, N-terminal domain ND05_RS27910 PF05194 UreE urease accessory protein, C-terminal domain ND05_RS27910 PF02814 UreE urease accessory protein, N-terminal domain ND05_RS27915 PF01730 UreF ND05_RS27920 PF02492 CobW/HypB/UreG, nucleotide-binding domain ND05_RS27940 PF02395 Immunoglobulin A1 protease ND05_RS27940 PF13018 Extended Signal Peptide of Type V secretion system ND05_RS27940 PF03797 Autotransporter beta-domain ND05_RS27960 PF05717 IS66 Orf2 like protein ND05_RS27965 PF13007 Transposase C of IS166 homeodomain ND05_RS27965 PF03050 Transposase IS66 family ND05_RS27965 PF13817 IS66 C-terminal element ND05_RS27965 PF13005 zinc-finger binding domain of transposase IS66 ND05_RS27970 PF05717 IS66 Orf2 like protein ND05_RS27975 PF03050 Transposase IS66 family ND05_RS27975 PF13817 IS66 C-terminal element ND05_RS27975 PF13007 Transposase C of IS166 homeodomain ND05_RS27975 PF13005 zinc-finger binding domain of transposase IS66 ND05_RS27995 PF13148 Protein of unknown function (DUF3987) ND05_RS28020 PF04954 Siderophore-interacting protein ND05_RS28020 PF08021 Siderophore-interacting FAD-binding domain ND05_RS28030 PF03551 Transcriptional regulator PadR-like family ND05_RS28035 PF08447 PAS fold ND05_RS28035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ND05_RS28045 PF00202 Aminotransferase class-III ND05_RS28050 PF01588 Putative tRNA binding domain ND05_RS28060 PF00356 Bacterial regulatory proteins, lacI family ND05_RS28065 PF16353 Domain of unknown function(DUF4981) ND05_RS28065 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ND05_RS28065 PF02837 Glycosyl hydrolases family 2, sugar binding domain ND05_RS28065 PF02929 Beta galactosidase small chain ND05_RS28065 PF00703 Glycosyl hydrolases family 2 ND05_RS28070 PF04074 YhcH/YjgK/YiaL ND05_RS28075 PF13520 Amino acid permease ND05_RS28085 PF01204 Trehalase ND05_RS28090 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND05_RS28090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ND05_RS28095 PF01381 Helix-turn-helix ND05_RS28100 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system ND05_RS28110 PF05175 Methyltransferase small domain ND05_RS28115 PF01863 Protein of unknown function DUF45 ND05_RS28120 PF02698 DUF218 domain ND05_RS28125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ND05_RS28130 PF03741 Integral membrane protein TerC family ND05_RS28135 PF00375 Sodium:dicarboxylate symporter family ND05_RS28140 PF10688 Bacterial inner membrane protein ND05_RS28145 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ND05_RS28145 PF08666 SAF domain ND05_RS28150 PF02614 Glucuronate isomerase ND05_RS28155 PF07690 Major Facilitator Superfamily ND05_RS28165 PF16967 E-set like domain ND05_RS28165 PF15976 CS1-pili formation C-terminal ND05_RS28165 PF17271 TcfC Usher-like barrel domain ND05_RS28170 PF04449 CS1 type fimbrial major subunit ND05_RS28185 PF00392 Bacterial regulatory proteins, gntR family ND05_RS28185 PF07729 FCD domain ND05_RS28190 PF09335 SNARE associated Golgi protein ND05_RS28195 PF13721 SecD export protein N-terminal TM region ND05_RS28200 PF06476 Protein of unknown function (DUF1090) ND05_RS28205 PF05957 Bacterial protein of unknown function (DUF883) ND05_RS28210 PF07332 Putative Actinobacterial Holin-X, holin superfamily III ND05_RS28215 PF13997 YqjK-like protein ND05_RS28220 PF07681 DoxX ND05_RS28225 PF13409 Glutathione S-transferase, N-terminal domain ND05_RS28230 PF05656 Protein of unknown function (DUF805) ND05_RS28235 PF05656 Protein of unknown function (DUF805) ND05_RS28245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS28245 PF03466 LysR substrate binding domain ND05_RS28250 PF17954 Quercetinase C-terminal cupin domain ND05_RS28250 PF02678 Pirin ND05_RS28260 PF03313 Serine dehydratase alpha chain ND05_RS28275 PF03313 Serine dehydratase alpha chain ND05_RS28275 PF03315 Serine dehydratase beta chain ND05_RS28280 PF01042 Endoribonuclease L-PSP ND05_RS28285 PF02901 Pyruvate formate lyase-like ND05_RS28285 PF01228 Glycine radical ND05_RS28290 PF00871 Acetokinase family ND05_RS28295 PF03222 Tryptophan/tyrosine permease family ND05_RS28300 PF00291 Pyridoxal-phosphate dependent enzyme ND05_RS28310 PF03466 LysR substrate binding domain ND05_RS28310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS28335 PF02595 Glycerate kinase family ND05_RS28340 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ND05_RS28340 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ND05_RS28345 PF03328 HpcH/HpaI aldolase/citrate lyase family ND05_RS28350 PF07690 Major Facilitator Superfamily ND05_RS28355 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ND05_RS28355 PF08666 SAF domain ND05_RS28360 PF15937 prlF antitoxin for toxin YhaV_toxin ND05_RS28365 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system ND05_RS28370 PF00455 DeoR C terminal sensor domain ND05_RS28370 PF08220 DeoR-like helix-turn-helix domain ND05_RS28380 PF08013 Tagatose 6 phosphate kinase ND05_RS28385 PF03830 PTS system sorbose subfamily IIB component ND05_RS28390 PF03609 PTS system sorbose-specific iic component ND05_RS28395 PF03613 PTS system mannose/fructose/sorbose family IID component ND05_RS28400 PF03610 PTS system fructose IIA component ND05_RS28405 PF01979 Amidohydrolase family ND05_RS28410 PF01380 SIS domain ND05_RS28415 PF01116 Fructose-bisphosphate aldolase class-II ND05_RS28420 PF03830 PTS system sorbose subfamily IIB component ND05_RS28425 PF03609 PTS system sorbose-specific iic component ND05_RS28430 PF03613 PTS system mannose/fructose/sorbose family IID component ND05_RS28435 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ND05_RS28440 PF00419 Fimbrial protein ND05_RS28445 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ND05_RS28445 PF02753 Pili assembly chaperone PapD, C-terminal domain ND05_RS28450 PF13954 PapC N-terminal domain ND05_RS28450 PF13953 PapC C-terminal domain ND05_RS28450 PF00577 Outer membrane usher protein ND05_RS28455 PF00419 Fimbrial protein ND05_RS28460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ND05_RS28465 PF04348 LppC putative lipoprotein ND05_RS28470 PF02021 Uncharacterised protein family UPF0102 ND05_RS28475 PF13580 SIS domain ND05_RS28480 PF04972 BON domain ND05_RS28485 PF03773 Predicted permease ND05_RS28490 PF13460 NAD(P)H-binding ND05_RS28495 PF01965 DJ-1/PfpI family ND05_RS28505 PF01541 GIY-YIG catalytic domain ND05_RS28510 PF13508 Acetyltransferase (GNAT) domain ND05_RS28515 PF02036 SCP-2 sterol transfer family ND05_RS28520 PF01136 Peptidase family U32 ND05_RS28525 PF01136 Peptidase family U32 ND05_RS28530 PF00296 Luciferase-like monooxygenase ND05_RS28535 PF03222 Tryptophan/tyrosine permease family ND05_RS28540 PF12343 Cold shock protein DEAD box A ND05_RS28540 PF00271 Helicase conserved C-terminal domain ND05_RS28540 PF03880 DbpA RNA binding domain ND05_RS28540 PF00270 DEAD/DEAH box helicase ND05_RS28550 PF13181 Tetratricopeptide repeat ND05_RS28550 PF07719 Tetratricopeptide repeat ND05_RS28555 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ND05_RS28555 PF03725 3' exoribonuclease family, domain 2 ND05_RS28555 PF01138 3' exoribonuclease family, domain 1 ND05_RS28555 PF00013 KH domain ND05_RS28555 PF00575 S1 RNA binding domain ND05_RS28560 PF00312 Ribosomal protein S15 ND05_RS28565 PF09157 Pseudouridine synthase II TruB, C-terminal ND05_RS28565 PF01509 TruB family pseudouridylate synthase (N terminal domain) ND05_RS28565 PF16198 tRNA pseudouridylate synthase B C-terminal domain ND05_RS28570 PF02033 Ribosome-binding factor A ND05_RS28575 PF04760 Translation initiation factor IF-2, N-terminal region ND05_RS28575 PF08364 Bacterial translation initiation factor IF-2 associated region ND05_RS28575 PF00009 Elongation factor Tu GTP binding domain ND05_RS28575 PF11987 Translation-initiation factor 2 ND05_RS28580 PF08529 NusA N-terminal domain ND05_RS28580 PF00575 S1 RNA binding domain ND05_RS28580 PF13184 NusA-like KH domain ND05_RS28585 PF02576 RimP N-terminal domain ND05_RS28585 PF17384 RimP C-terminal SH3 domain ND05_RS28595 PF00764 Arginosuccinate synthase ND05_RS28600 PF00884 Sulfatase ND05_RS28610 PF03840 Preprotein translocase SecG subunit ND05_RS28615 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ND05_RS28615 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ND05_RS28615 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ND05_RS28615 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ND05_RS28620 PF00809 Pterin binding enzyme ND05_RS28625 PF01434 Peptidase family M41 ND05_RS28625 PF17862 AAA+ lid domain ND05_RS28625 PF06480 FtsH Extracellular ND05_RS28625 PF00004 ATPase family associated with various cellular activities (AAA) ND05_RS28630 PF01728 FtsJ-like methyltransferase ND05_RS28635 PF01985 CRS1 / YhbY (CRM) domain ND05_RS28640 PF03449 Transcription elongation factor, N-terminal ND05_RS28640 PF01272 Transcription elongation factor, GreA/GreB, C-term ND05_RS28645 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ND05_RS28650 PF01018 GTP1/OBG ND05_RS28650 PF01926 50S ribosome-binding GTPase ND05_RS28655 PF00892 EamA-like transporter family ND05_RS28660 PF01016 Ribosomal L27 protein ND05_RS28665 PF00829 Ribosomal prokaryotic L21 protein ND05_RS28670 PF00348 Polyprenyl synthetase ND05_RS28675 PF13693 Winged helix-turn-helix DNA-binding ND05_RS28680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ND05_RS28685 PF01722 BolA-like protein ND05_RS28690 PF13466 STAS domain ND05_RS28695 PF05494 MlaC protein ND05_RS28700 PF02470 MlaD protein ND05_RS28705 PF02405 Permease MlaE ND05_RS28710 PF00005 ABC transporter ND05_RS28715 PF01699 Sodium/calcium exchanger protein ND05_RS28720 PF00571 CBS domain ND05_RS28720 PF01380 SIS domain ND05_RS28730 PF06835 Lipopolysaccharide-assembly, LptC-related ND05_RS28735 PF03968 OstA-like protein ND05_RS28740 PF00005 ABC transporter ND05_RS28740 PF12399 Branched-chain amino acid ATP-binding cassette transporter ND05_RS28745 PF00309 Sigma-54 factor, Activator interacting domain (AID) ND05_RS28745 PF04552 Sigma-54, DNA binding domain ND05_RS28745 PF04963 Sigma-54 factor, core binding domain ND05_RS28750 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ND05_RS28755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ND05_RS28760 PF03668 P-loop ATPase protein family ND05_RS28765 PF00381 PTS HPr component phosphorylation site ND05_RS28770 PF10707 PhoP regulatory network protein YrbL ND05_RS28775 PF00912 Transglycosylase ND05_RS28785 PF00072 Response regulator receiver domain ND05_RS28785 PF00989 PAS fold ND05_RS28785 PF01627 Hpt domain ND05_RS28785 PF18415 Histidine kinase receptor ArcB trans-membrane domain ND05_RS28785 PF00512 His Kinase A (phospho-acceptor) domain ND05_RS28785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ND05_RS28790 PF16199 Radical_SAM C-terminal domain ND05_RS28790 PF04055 Radical SAM superfamily ND05_RS28805 PF01645 Conserved region in glutamate synthase ND05_RS28805 PF01493 GXGXG motif ND05_RS28805 PF00310 Glutamine amidotransferases class-II ND05_RS28805 PF04898 Glutamate synthase central domain ND05_RS28810 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ND05_RS28810 PF07992 Pyridine nucleotide-disulphide oxidoreductase ND05_RS28815 PF17761 DUF1016 N-terminal domain ND05_RS28815 PF06250 YhcG PDDEXK nuclease domain ND05_RS28820 PF04074 YhcH/YjgK/YiaL ND05_RS28825 PF00480 ROK family ND05_RS28830 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ND05_RS28835 PF07690 Major Facilitator Superfamily ND05_RS28840 PF00701 Dihydrodipicolinate synthetase family ND05_RS28845 PF07729 FCD domain ND05_RS28845 PF00392 Bacterial regulatory proteins, gntR family ND05_RS28855 PF03606 C4-dicarboxylate anaerobic carrier ND05_RS28860 PF04386 Stringent starvation protein B ND05_RS28865 PF02798 Glutathione S-transferase, N-terminal domain ND05_RS28865 PF00043 Glutathione S-transferase, C-terminal domain ND05_RS28875 PF00380 Ribosomal protein S9/S16 ND05_RS28880 PF00572 Ribosomal protein L13 ND05_RS28885 PF03969 AFG1-like ATPase ND05_RS28890 PF06295 Protein of unknown function (DUF1043) ND05_RS28895 PF00595 PDZ domain ND05_RS28895 PF13180 PDZ domain ND05_RS28900 PF13180 PDZ domain ND05_RS28905 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ND05_RS28905 PF00056 lactate/malate dehydrogenase, NAD binding domain ND05_RS28910 PF02863 Arginine repressor, C-terminal domain ND05_RS28910 PF01316 Arginine repressor, DNA binding domain ND05_RS28915 PF07338 Protein of unknown function (DUF1471) ND05_RS28920 PF01337 Barstar (barnase inhibitor) ND05_RS28925 PF04632 Fusaric acid resistance protein family ND05_RS28930 PF13533 Biotin-lipoyl like ND05_RS28935 PF07869 Protein of unknown function (DUF1656) ND05_RS28940 PF03466 LysR substrate binding domain ND05_RS28940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ND05_RS28945 PF01523 Putative modulator of DNA gyrase ND05_RS28950 PF13502 AsmA-like C-terminal region ND05_RS28950 PF13116 Protein of unknown function ND05_RS28955 PF10150 Ribonuclease E/G family ND05_RS28955 PF00575 S1 RNA binding domain ND05_RS28960 PF02545 Maf-like protein ND05_RS28965 PF04093 rod shape-determining protein MreD ND05_RS28970 PF04085 rod shape-determining protein MreC ND05_RS28995 PF00107 Zinc-binding dehydrogenase ND05_RS28995 PF08240 Alcohol dehydrogenase GroES-like domain ND05_RS29010 PF00364 Biotin-requiring enzyme ND05_RS29015 PF00289 Biotin carboxylase, N-terminal domain ND05_RS29015 PF02785 Biotin carboxylase C-terminal domain ND05_RS29015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ND05_RS29020 PF06196 Protein of unknown function (DUF997) ND05_RS29025 PF00474 Sodium:solute symporter family ND05_RS29035 PF01207 Dihydrouridine synthase (Dus) ND05_RS29040 PF02954 Bacterial regulatory protein, Fis family ND05_RS29045 PF01555 DNA methylase ND05_RS29050 PF10831 Protein of unknown function (DUF2556) ND05_RS29055 PF08361 MAATS-type transcriptional repressor, C-terminal region ND05_RS29055 PF00440 Bacterial regulatory proteins, tetR family ND05_RS29065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ND05_RS29065 PF00529 HlyD membrane-fusion protein of T1SS ND05_RS29070 PF00873 AcrB/AcrD/AcrF family ND05_RS29085 PF00497 Bacterial extracellular solute-binding proteins, family 3 ND05_RS29090 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS29095 PF00528 Binding-protein-dependent transport system inner membrane component ND05_RS29100 PF00005 ABC transporter ND05_RS29140 PF00132 Bacterial transferase hexapeptide (six repeats) ND05_RS29145 PF07369 Protein of unknown function (DUF1488) ND05_RS29150 PF01488 Shikimate / quinate 5-dehydrogenase ND05_RS29150 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ND05_RS29150 PF08501 Shikimate dehydrogenase substrate binding domain ND05_RS29155 PF01300 Telomere recombination ND05_RS29160 PF01396 Topoisomerase DNA binding C4 zinc finger ND05_RS29165 PF04361 Protein of unknown function (DUF494) ND05_RS29170 PF17782 DprA winged helix domain ND05_RS29170 PF02481 DNA recombination-mediator protein A ND05_RS29175 PF01327 Polypeptide deformylase ND05_RS29180 PF02911 Formyl transferase, C-terminal domain ND05_RS29180 PF00551 Formyl transferase ND05_RS29185 PF01029 NusB family ND05_RS29185 PF01189 16S rRNA methyltransferase RsmB/F ND05_RS29190 PF02080 TrkA-C domain ND05_RS29190 PF02254 TrkA-N domain ND05_RS29195 PF01741 Large-conductance mechanosensitive channel, MscL ND05_RS29200 PF03889 Alternative ribosome-rescue factor A ND05_RS29205 PF13411 MerR HTH family regulatory protein ND05_RS29210 PF09350 Domain of unknown function (DUF1992) ND05_RS29215 PF01196 Ribosomal protein L17 ND05_RS29220 PF01000 RNA polymerase Rpb3/RpoA insert domain ND05_RS29220 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ND05_RS29220 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ND05_RS29225 PF00163 Ribosomal protein S4/S9 N-terminal domain ND05_RS29225 PF01479 S4 domain ND05_RS29230 PF00411 Ribosomal protein S11 ND05_RS29235 PF00416 Ribosomal protein S13/S18 ND05_RS29240 PF00444 Ribosomal protein L36 ND05_RS29245 PF00344 SecY translocase ND05_RS29250 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ND05_RS29255 PF00327 Ribosomal protein L30p/L7e ND05_RS29260 PF03719 Ribosomal protein S5, C-terminal domain ND05_RS29260 PF00333 Ribosomal protein S5, N-terminal domain ND05_RS29265 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ND05_RS29270 PF00347 Ribosomal protein L6 ND05_RS29275 PF00410 Ribosomal protein S8 ND05_RS29280 PF00253 Ribosomal protein S14p/S29e ND05_RS29285 PF00281 Ribosomal protein L5 ND05_RS29285 PF00673 ribosomal L5P family C-terminus ND05_RS29290 PF00467 KOW motif ND05_RS29290 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ND05_RS29295 PF00238 Ribosomal protein L14p/L23e ND05_RS29300 PF00366 Ribosomal protein S17 ND05_RS29305 PF00831 Ribosomal L29 protein ND05_RS29310 PF00252 Ribosomal protein L16p/L10e ND05_RS29315 PF00189 Ribosomal protein S3, C-terminal domain ND05_RS29315 PF07650 KH domain ND05_RS29320 PF00237 Ribosomal protein L22p/L17e ND05_RS29325 PF00203 Ribosomal protein S19 ND05_RS29330 PF03947 Ribosomal Proteins L2, C-terminal domain ND05_RS29330 PF00181 Ribosomal Proteins L2, RNA binding domain ND05_RS29335 PF00276 Ribosomal protein L23 ND05_RS29340 PF00573 Ribosomal protein L4/L1 family ND05_RS29345 PF00297 Ribosomal protein L3 ND05_RS29350 PF00338 Ribosomal protein S10p/S20e ND05_RS29365 PF00210 Ferritin-like domain ND05_RS29370 PF04324 BFD-like [2Fe-2S] binding domain ND05_RS29380 PF03144 Elongation factor Tu domain 2 ND05_RS29380 PF00009 Elongation factor Tu GTP binding domain ND05_RS29380 PF03143 Elongation factor Tu C-terminal domain ND05_RS29385 PF03144 Elongation factor Tu domain 2 ND05_RS29385 PF14492 Elongation Factor G, domain II ND05_RS29385 PF03764 Elongation factor G, domain IV ND05_RS29385 PF00009 Elongation factor Tu GTP binding domain ND05_RS29385 PF00679 Elongation factor G C-terminus ND05_RS29390 PF00177 Ribosomal protein S7p/S5e ND05_RS29395 PF00164 Ribosomal protein S12/S23 ND05_RS29400 PF04077 DsrH like protein ND05_RS29405 PF02635 DsrE/DsrF-like family ND05_RS29410 PF02635 DsrE/DsrF-like family ND05_RS29415 PF13309 HTH domain ND05_RS29415 PF08348 YheO-like PAS domain ND05_RS29420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND05_RS29420 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ND05_RS29425 PF04102 SlyX ND05_RS29430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ND05_RS29435 PF09526 Probable metal-binding protein (DUF2387) ND05_RS29440 PF00999 Sodium/hydrogen exchanger family ND05_RS29440 PF02254 TrkA-N domain ND05_RS29445 PF02525 Flavodoxin-like fold ND05_RS29455 PF12848 ABC transporter ND05_RS29455 PF00005 ABC transporter ND05_RS29460 PF00561 alpha/beta hydrolase fold ND05_RS29465 PF06794 Uncharacterised protein family (UPF0270) ND05_RS29470 PF00485 Phosphoribulokinase / Uridine kinase family ND05_RS29475 PF02566 OsmC-like protein ND05_RS29485 PF13545 Crp-like helix-turn-helix domain ND05_RS29485 PF00027 Cyclic nucleotide-binding domain ND05_RS29490 PF12805 FUSC-like inner membrane protein yccS ND05_RS29495 PF00202 Aminotransferase class-III ND05_RS29500 PF00117 Glutamine amidotransferase class-I ND05_RS29505 PF02661 Fic/DOC family ND05_RS29510 PF10832 Protein of unknown function (DUF2559) ND05_RS29515 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ND05_RS29520 PF07690 Major Facilitator Superfamily