A9C00_RS00045	SM00857	Resolvase, N terminal domain
A9C00_RS00050	SM00507	HNH nucleases
A9C00_RS00070	SM00422	helix_turn_helix, mercury resistance
A9C00_RS00075	SM00052	Putative diguanylate phosphodiesterase
A9C00_RS00075	SM01034	Sensors of blue-light using FAD
A9C00_RS00100	SM00052	Putative diguanylate phosphodiesterase
A9C00_RS00215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9C00_RS00230	SM01005	Alanine racemase, C-terminal domain
A9C00_RS00235	SM01091	Transporter associated domain
A9C00_RS00275	SM01120	A9C00_RS00275
A9C00_RS00285	SM00091	PAS domain
A9C00_RS00285	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS00290	SM00869	Autotransporter beta-domain
A9C00_RS00320	SM01400	A9C00_RS00320
A9C00_RS00340	SM00937	A9C00_RS00340
A9C00_RS00405	SM00421	helix_turn_helix, Lux Regulon
A9C00_RS00405	SM00448	cheY-homologous receiver domain
A9C00_RS00410	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9C00_RS00410	SM00387	Histidine kinase-like ATPases
A9C00_RS00425	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A9C00_RS00475	SM00448	cheY-homologous receiver domain
A9C00_RS00485	SM00528	Domain in histone-like proteins of HNS family
A9C00_RS00530	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS00535	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS00545	SM00155	Phospholipase D. Active site motifs.
A9C00_RS00635	SM00481	DNA polymerase alpha chain like domain
A9C00_RS00645	SM00363	S4 RNA-binding domain
A9C00_RS00655	SM00822	A9C00_RS00655
A9C00_RS00680	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A9C00_RS00680	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A9C00_RS00680	SM00493	A9C00_RS00680
A9C00_RS00715	SM00014	Acid phosphatase homologues
A9C00_RS00725	SM00028	Tetratricopeptide repeats
A9C00_RS00730	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A9C00_RS00745	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9C00_RS00745	SM01134	A9C00_RS00745
A9C00_RS00755	SM00052	Putative diguanylate phosphodiesterase
A9C00_RS00755	SM00091	PAS domain
A9C00_RS00755	SM00267	diguanylate cyclase
A9C00_RS00765	SM00357	Cold shock protein domain
A9C00_RS00765	SM00955	A9C00_RS00765
A9C00_RS00790	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS00795	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS00830	SM01230	A9C00_RS00830
A9C00_RS00840	SM00530	Helix-turn-helix XRE-family like proteins 
A9C00_RS00860	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS00885	SM00450	Rhodanese Homology Domain
A9C00_RS00890	SM00642	Alpha-amylase domain
A9C00_RS00935	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS00945	SM00354	helix_turn _helix lactose operon repressor
A9C00_RS00960	SM00091	PAS domain
A9C00_RS00960	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS00970	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A9C00_RS01025	SM00100	Cyclic nucleotide-monophosphate binding domain
A9C00_RS01025	SM00419	helix_turn_helix, cAMP Regulatory protein
A9C00_RS01060	SM00463	Small MutS-related domain
A9C00_RS01065	SM00091	PAS domain
A9C00_RS01065	SM00267	diguanylate cyclase
A9C00_RS01080	SM00487	DEAD-like helicases superfamily
A9C00_RS01080	SM00490	helicase superfamily c-terminal domain
A9C00_RS01260	SM00470	ParB-like nuclease domain
A9C00_RS01355	SM00232	JAB/MPN domain
A9C00_RS01365	SM00060	Fibronectin type 3 domain
A9C00_RS01395	SM00857	Resolvase, N terminal domain
A9C00_RS01415	SM00890	Domain of unknown function
A9C00_RS01450	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS01570	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS01570	SM00487	DEAD-like helicases superfamily
A9C00_RS01570	SM00490	helicase superfamily c-terminal domain
A9C00_RS01570	SM00847	Helicase associated domain (HA2)  Add an annotation
A9C00_RS01585	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A9C00_RS01615	SM01150	A9C00_RS01615
A9C00_RS01675	SM00530	Helix-turn-helix XRE-family like proteins 
A9C00_RS01695	SM00530	Helix-turn-helix XRE-family like proteins 
A9C00_RS01700	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9C00_RS01710	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS01760	SM00829	Enoylreductase
A9C00_RS01765	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9C00_RS01765	SM00895	A9C00_RS01765
A9C00_RS01860	SM00903	Flavin reductase like domain
A9C00_RS01890	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A9C00_RS01915	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A9C00_RS01935	SM00530	Helix-turn-helix XRE-family like proteins 
A9C00_RS01940	SM00829	Enoylreductase
A9C00_RS01945	SM00919	Malic enzyme, NAD binding domain
A9C00_RS01945	SM01274	A9C00_RS01945
A9C00_RS01965	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS01970	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS01995	SM00052	Putative diguanylate phosphodiesterase
A9C00_RS01995	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9C00_RS01995	SM00091	PAS domain
A9C00_RS01995	SM00267	diguanylate cyclase
A9C00_RS02000	SM00267	diguanylate cyclase
A9C00_RS02035	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS02050	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS02105	SM00530	Helix-turn-helix XRE-family like proteins 
A9C00_RS02110	SM00869	Autotransporter beta-domain
A9C00_RS02125	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS02145	SM01133	A9C00_RS02145
A9C00_RS02170	SM00267	diguanylate cyclase
A9C00_RS02215	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9C00_RS02220	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS02260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9C00_RS02260	SM00866	A9C00_RS02260
A9C00_RS02280	SM00267	diguanylate cyclase
A9C00_RS02365	SM00232	JAB/MPN domain
A9C00_RS02555	SM00530	Helix-turn-helix XRE-family like proteins 
A9C00_RS02615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9C00_RS02615	SM00895	A9C00_RS02615
A9C00_RS02640	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A9C00_RS02670	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A9C00_RS02675	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A9C00_RS02755	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
A9C00_RS02755	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
A9C00_RS02780	SM00448	cheY-homologous receiver domain
A9C00_RS02780	SM00862	Transcriptional regulatory protein, C terminal
A9C00_RS02785	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9C00_RS02785	SM00387	Histidine kinase-like ATPases
A9C00_RS02785	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS02840	SM00354	helix_turn _helix lactose operon repressor
A9C00_RS02900	SM00900	A9C00_RS02900
A9C00_RS02910	SM00478	endonuclease III
A9C00_RS02910	SM00525	A9C00_RS02910
A9C00_RS02935	SM00363	S4 RNA-binding domain
A9C00_RS02960	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9C00_RS03010	SM00479	A9C00_RS03010
A9C00_RS03045	SM00354	helix_turn _helix lactose operon repressor
A9C00_RS03120	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
A9C00_RS03145	SM00257	Lysin motif
A9C00_RS03165	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS03230	SM00882	Coenzyme A transferase
A9C00_RS03240	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS03250	SM00893	Electron transfer flavoprotein domain
A9C00_RS03255	SM00893	Electron transfer flavoprotein domain
A9C00_RS03315	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS03330	SM00411	bacterial (prokaryotic) histone like domain
A9C00_RS03335	SM00873	B3/4 domain
A9C00_RS03335	SM00874	tRNA synthetase B5 domain
A9C00_RS03335	SM00896	Ferredoxin-fold anticodon binding domain
A9C00_RS03365	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A9C00_RS03435	SM01060	A9C00_RS03435
A9C00_RS03450	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS03485	SM00465	GIY-YIG type nucleases (URI domain)
A9C00_RS03560	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS03565	SM00450	Rhodanese Homology Domain
A9C00_RS03585	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A9C00_RS03595	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A9C00_RS03595	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A9C00_RS03595	SM00493	A9C00_RS03595
A9C00_RS03625	SM00870	A9C00_RS03625
A9C00_RS03640	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9C00_RS03640	SM01134	A9C00_RS03640
A9C00_RS03660	SM00829	Enoylreductase
A9C00_RS03685	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A9C00_RS03705	SM00763	PrkA AAA domain
A9C00_RS03715	SM00267	diguanylate cyclase
A9C00_RS03720	SM00267	diguanylate cyclase
A9C00_RS03740	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS03760	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9C00_RS03760	SM00267	diguanylate cyclase
A9C00_RS03780	SM01321	A9C00_RS03780
A9C00_RS03805	SM01329	A9C00_RS03805
A9C00_RS03825	SM00341	Helicase and RNase D C-terminal
A9C00_RS03825	SM00474	3'-5' exonuclease
A9C00_RS03845	SM00487	DEAD-like helicases superfamily
A9C00_RS03845	SM00491	A9C00_RS03845
A9C00_RS03880	SM00052	Putative diguanylate phosphodiesterase
A9C00_RS03885	SM01091	Transporter associated domain
A9C00_RS03930	SM00357	Cold shock protein domain
A9C00_RS03960	SM00346	helix_turn_helix isocitrate lyase regulation
A9C00_RS03975	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9C00_RS03975	SM00245	tail specific protease
A9C00_RS03980	SM00945	ProQ/FINO family
A9C00_RS03985	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9C00_RS04050	SM00479	A9C00_RS04050
A9C00_RS04120	SM00257	Lysin motif
A9C00_RS04130	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS04140	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS04145	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A9C00_RS04220	SM00836	DALR anticodon binding domain
A9C00_RS04220	SM01016	Arginyl tRNA synthetase N terminal dom
A9C00_RS04250	SM00448	cheY-homologous receiver domain
A9C00_RS04255	SM00448	cheY-homologous receiver domain
A9C00_RS04260	SM00138	Methyltransferase, chemotaxis proteins 
A9C00_RS04265	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9C00_RS04265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9C00_RS04265	SM00319	Homologues of the ligand binding domain of Tar
A9C00_RS04270	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9C00_RS04270	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9C00_RS04270	SM00319	Homologues of the ligand binding domain of Tar
A9C00_RS04275	SM00260	Two component signalling adaptor domain
A9C00_RS04280	SM00073	Histidine Phosphotransfer domain
A9C00_RS04280	SM00260	Two component signalling adaptor domain
A9C00_RS04280	SM00387	Histidine kinase-like ATPases
A9C00_RS04280	SM01231	A9C00_RS04280
A9C00_RS04325	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS04395	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A9C00_RS04395	SM00465	GIY-YIG type nucleases (URI domain)
A9C00_RS04400	SM00421	helix_turn_helix, Lux Regulon
A9C00_RS04400	SM00448	cheY-homologous receiver domain
A9C00_RS04415	SM00421	helix_turn_helix, Lux Regulon
A9C00_RS04420	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS04435	SM00062	Bacterial periplasmic substrate-binding proteins
A9C00_RS04435	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A9C00_RS04470	SM00642	Alpha-amylase domain
A9C00_RS04525	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS04575	SM00421	helix_turn_helix, Lux Regulon
A9C00_RS04625	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9C00_RS04650	SM00387	Histidine kinase-like ATPases
A9C00_RS04650	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS04655	SM00448	cheY-homologous receiver domain
A9C00_RS04655	SM00862	Transcriptional regulatory protein, C terminal
A9C00_RS04660	SM00095	Transthyretin
A9C00_RS04885	SM00869	Autotransporter beta-domain
A9C00_RS04965	SM00871	Bacterial transcription activator, effector binding domain
A9C00_RS04970	SM00936	Penicillin-binding protein 5, C-terminal domain 
A9C00_RS04975	SM00479	A9C00_RS04975
A9C00_RS05060	SM00984	UDP binding domain
A9C00_RS05075	SM01350	A9C00_RS05075
A9C00_RS05210	SM00226	Low molecular weight phosphatase family
A9C00_RS05220	SM01091	Transporter associated domain
A9C00_RS05240	SM00052	Putative diguanylate phosphodiesterase
A9C00_RS05240	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9C00_RS05240	SM00091	PAS domain
A9C00_RS05240	SM00267	diguanylate cyclase
A9C00_RS05245	SM00478	endonuclease III
A9C00_RS05245	SM01009	AlkA N-terminal domain
A9C00_RS05265	SM00327	von Willebrand factor (vWF) type A domain
A9C00_RS05290	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9C00_RS05290	SM00387	Histidine kinase-like ATPases
A9C00_RS05290	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS05295	SM00448	cheY-homologous receiver domain
A9C00_RS05295	SM00862	Transcriptional regulatory protein, C terminal
A9C00_RS05330	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A9C00_RS05335	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9C00_RS05335	SM01134	A9C00_RS05335
A9C00_RS05340	SM00829	Enoylreductase
A9C00_RS05370	SM01133	A9C00_RS05370
A9C00_RS05390	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9C00_RS05390	SM00866	A9C00_RS05390
A9C00_RS05395	SM00641	Glycosyl hydrolases family 25
A9C00_RS05465	SM00773	Proposed nucleic acid binding domain
A9C00_RS05490	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS05500	SM00327	von Willebrand factor (vWF) type A domain
A9C00_RS05520	SM00448	cheY-homologous receiver domain
A9C00_RS05520	SM00850	LytTr DNA-binding domain
A9C00_RS05525	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9C00_RS05530	SM00422	helix_turn_helix, mercury resistance
A9C00_RS05545	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS05560	SM01217	A9C00_RS05560
A9C00_RS05645	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS05655	SM00354	helix_turn _helix lactose operon repressor
A9C00_RS05710	SM00518	AP endonuclease family 2
A9C00_RS05760	SM00100	Cyclic nucleotide-monophosphate binding domain
A9C00_RS05805	SM00841	Elongation factor P, C-terminal
A9C00_RS05805	SM01185	A9C00_RS05805
A9C00_RS05815	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A9C00_RS05820	SM00014	Acid phosphatase homologues
A9C00_RS05830	SM00052	Putative diguanylate phosphodiesterase
A9C00_RS05850	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS05865	SM00363	S4 RNA-binding domain
A9C00_RS05870	SM00487	DEAD-like helicases superfamily
A9C00_RS05870	SM00490	helicase superfamily c-terminal domain
A9C00_RS05915	SM00421	helix_turn_helix, Lux Regulon
A9C00_RS05915	SM00448	cheY-homologous receiver domain
A9C00_RS05955	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS05980	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A9C00_RS06010	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS06020	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS06045	SM00387	Histidine kinase-like ATPases
A9C00_RS06050	SM00421	helix_turn_helix, Lux Regulon
A9C00_RS06050	SM00448	cheY-homologous receiver domain
A9C00_RS06055	SM00387	Histidine kinase-like ATPases
A9C00_RS06055	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS06055	SM00448	cheY-homologous receiver domain
A9C00_RS06070	SM01359	A9C00_RS06070
A9C00_RS06070	SM01360	A9C00_RS06070
A9C00_RS06090	SM00434	DNA Topoisomerase IV
A9C00_RS06100	SM00869	Autotransporter beta-domain
A9C00_RS06170	SM00852	Probable molybdopterin binding domain
A9C00_RS06235	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A9C00_RS06270	SM00849	Metallo-beta-lactamase superfamily
A9C00_RS06280	SM00327	von Willebrand factor (vWF) type A domain
A9C00_RS06330	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A9C00_RS06330	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
A9C00_RS06335	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
A9C00_RS06370	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9C00_RS06435	SM00905	Dihydroneopterin aldolase
A9C00_RS06450	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS06465	SM00062	Bacterial periplasmic substrate-binding proteins
A9C00_RS06515	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A9C00_RS06695	SM00506	Appr-1"-p processing enzyme
A9C00_RS06780	SM00825	Beta-ketoacyl synthase
A9C00_RS06820	SM00463	Small MutS-related domain
A9C00_RS06915	SM00640	Glycosyl hydrolases family 32
A9C00_RS06920	SM00354	helix_turn _helix lactose operon repressor
A9C00_RS06945	SM00421	helix_turn_helix, Lux Regulon
A9C00_RS06945	SM00448	cheY-homologous receiver domain
A9C00_RS06950	SM00062	Bacterial periplasmic substrate-binding proteins
A9C00_RS06950	SM00073	Histidine Phosphotransfer domain
A9C00_RS06950	SM00387	Histidine kinase-like ATPases
A9C00_RS06950	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS06950	SM00448	cheY-homologous receiver domain
A9C00_RS07005	SM00387	Histidine kinase-like ATPases
A9C00_RS07010	SM00448	cheY-homologous receiver domain
A9C00_RS07010	SM00850	LytTr DNA-binding domain
A9C00_RS07015	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS07075	SM00052	Putative diguanylate phosphodiesterase
A9C00_RS07075	SM00267	diguanylate cyclase
A9C00_RS07170	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A9C00_RS07170	SM00292	breast cancer carboxy-terminal domain
A9C00_RS07170	SM00532	Ligase N family
A9C00_RS07175	SM00771	ZipA, C-terminal domain (FtsZ-binding)
A9C00_RS07220	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS07240	SM00822	A9C00_RS07240
A9C00_RS07285	SM00646	A9C00_RS07285
A9C00_RS07295	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS07300	SM00877	A9C00_RS07300
A9C00_RS07305	SM00877	A9C00_RS07305
A9C00_RS07350	SM00877	A9C00_RS07350
A9C00_RS07375	SM00877	A9C00_RS07375
A9C00_RS07380	SM00919	Malic enzyme, NAD binding domain
A9C00_RS07380	SM01274	A9C00_RS07380
A9C00_RS07390	SM00861	Transketolase, pyrimidine binding domain
A9C00_RS07410	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9C00_RS07410	SM00387	Histidine kinase-like ATPases
A9C00_RS07480	SM01130	A9C00_RS07480
A9C00_RS07550	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9C00_RS07550	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS07610	SM00052	Putative diguanylate phosphodiesterase
A9C00_RS07610	SM00267	diguanylate cyclase
A9C00_RS07760	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9C00_RS07760	SM01240	A9C00_RS07760
A9C00_RS07780	SM00564	beta-propeller repeat
A9C00_RS07800	SM00530	Helix-turn-helix XRE-family like proteins 
A9C00_RS07810	SM00562	A9C00_RS07810
A9C00_RS07820	SM01359	A9C00_RS07820
A9C00_RS07820	SM01360	A9C00_RS07820
A9C00_RS07825	SM00450	Rhodanese Homology Domain
A9C00_RS07855	SM00271	DnaJ molecular chaperone homology domain
A9C00_RS07945	SM00829	Enoylreductase
A9C00_RS07955	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS07965	SM00028	Tetratricopeptide repeats
A9C00_RS07985	SM00938	Nitrogen regulatory protein P-II
A9C00_RS07990	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS07990	SM00448	cheY-homologous receiver domain
A9C00_RS08000	SM00387	Histidine kinase-like ATPases
A9C00_RS08000	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS08005	SM01211	A9C00_RS08005
A9C00_RS08010	SM00062	Bacterial periplasmic substrate-binding proteins
A9C00_RS08070	SM00358	Double-stranded RNA binding motif
A9C00_RS08070	SM00535	Ribonuclease III family
A9C00_RS08120	SM00487	DEAD-like helicases superfamily
A9C00_RS08120	SM00490	helicase superfamily c-terminal domain
A9C00_RS08145	SM00986	Uracil DNA glycosylase superfamily
A9C00_RS08145	SM00987	UreE urease accessory protein, C-terminal domain 
A9C00_RS08150	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A9C00_RS08165	SM01144	A9C00_RS08165
A9C00_RS08170	SM00881	CoA binding domain
A9C00_RS08175	SM00155	Phospholipase D. Active site motifs.
A9C00_RS08215	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS08215	SM01086	C-terminal, D2-small domain, of ClpB protein
A9C00_RS08225	SM00363	S4 RNA-binding domain
A9C00_RS08245	SM00830	Chorismate mutase type II
A9C00_RS08250	SM00830	Chorismate mutase type II
A9C00_RS08270	SM00267	diguanylate cyclase
A9C00_RS08300	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS08300	SM00962	SRP54-type protein, GTPase domain
A9C00_RS08300	SM00963	SRP54-type protein, helical bundle domain
A9C00_RS08310	SM01091	Transporter associated domain
A9C00_RS08410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9C00_RS08410	SM00895	A9C00_RS08410
A9C00_RS08415	SM00257	Lysin motif
A9C00_RS08415	SM00749	bacterial OsmY and nodulation domain
A9C00_RS08425	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A9C00_RS08430	SM00450	Rhodanese Homology Domain
A9C00_RS08435	SM00528	Domain in histone-like proteins of HNS family
A9C00_RS08475	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS08505	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9C00_RS08570	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A9C00_RS08585	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS08625	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9C00_RS08625	SM01134	A9C00_RS08625
A9C00_RS08635	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9C00_RS08635	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS08640	SM00849	Metallo-beta-lactamase superfamily
A9C00_RS08660	SM00354	helix_turn _helix lactose operon repressor
A9C00_RS08750	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9C00_RS08750	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS08760	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A9C00_RS08760	SM00534	ATPase domain of DNA mismatch repair MUTS family
A9C00_RS08770	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9C00_RS08770	SM01134	A9C00_RS08770
A9C00_RS08785	SM01007	Class II Aldolase and Adducin N-terminal domain
A9C00_RS08815	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9C00_RS08825	SM00257	Lysin motif
A9C00_RS08895	SM01101	A9C00_RS08895
A9C00_RS08920	SM00487	DEAD-like helicases superfamily
A9C00_RS08970	SM00893	Electron transfer flavoprotein domain
A9C00_RS09015	SM01192	A9C00_RS09015
A9C00_RS09015	SM01193	A9C00_RS09015
A9C00_RS09035	SM00966	SpoVT / AbrB like domain 
A9C00_RS09040	SM00954	Region found in RelA / SpoT proteins
A9C00_RS09050	SM00073	Histidine Phosphotransfer domain
A9C00_RS09050	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9C00_RS09050	SM00387	Histidine kinase-like ATPases
A9C00_RS09050	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS09050	SM00448	cheY-homologous receiver domain
A9C00_RS09055	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A9C00_RS09060	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A9C00_RS09115	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A9C00_RS09115	SM00475	5'-3' exonuclease
A9C00_RS09125	SM01007	Class II Aldolase and Adducin N-terminal domain
A9C00_RS09150	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9C00_RS09150	SM01134	A9C00_RS09150
A9C00_RS09190	SM00925	MltA specific insert domain
A9C00_RS09210	SM00646	A9C00_RS09210
A9C00_RS09220	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS09270	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9C00_RS09290	SM00927	DNA mismatch repair enzyme MutH
A9C00_RS09315	SM00563	Phosphate acyltransferases
A9C00_RS09320	SM00354	helix_turn _helix lactose operon repressor
A9C00_RS09370	SM00862	Transcriptional regulatory protein, C terminal
A9C00_RS09395	SM00028	Tetratricopeptide repeats
A9C00_RS09395	SM00862	Transcriptional regulatory protein, C terminal
A9C00_RS09410	SM00421	helix_turn_helix, Lux Regulon
A9C00_RS09455	SM00421	helix_turn_helix, Lux Regulon
A9C00_RS09510	SM00257	Lysin motif
A9C00_RS09515	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
A9C00_RS09520	SM01092	CO dehydrogenase flavoprotein C-terminal domain
A9C00_RS09530	SM00091	PAS domain
A9C00_RS09530	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS09585	SM01092	CO dehydrogenase flavoprotein C-terminal domain
A9C00_RS09590	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
A9C00_RS09645	SM00937	A9C00_RS09645
A9C00_RS09695	SM01022	A9C00_RS09695
A9C00_RS09735	SM01011	Aminopeptidase P, N-terminal domain
A9C00_RS09835	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A9C00_RS09855	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS09860	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS09895	SM00861	Transketolase, pyrimidine binding domain
A9C00_RS09935	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS09980	SM00731	SprT homologues.
A9C00_RS10005	SM00732	Likely ribonuclease with RNase H fold.
A9C00_RS10010	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS10025	SM01152	A9C00_RS10025
A9C00_RS10035	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9C00_RS10045	SM00870	A9C00_RS10045
A9C00_RS10070	SM00478	endonuclease III
A9C00_RS10070	SM00525	A9C00_RS10070
A9C00_RS10145	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS10170	SM01276	A9C00_RS10170
A9C00_RS10210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9C00_RS10210	SM00895	A9C00_RS10210
A9C00_RS10395	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS10425	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9C00_RS10435	SM00563	Phosphate acyltransferases
A9C00_RS10440	SM00434	DNA Topoisomerase IV
A9C00_RS10445	SM00871	Bacterial transcription activator, effector binding domain
A9C00_RS10455	SM00448	cheY-homologous receiver domain
A9C00_RS10455	SM00862	Transcriptional regulatory protein, C terminal
A9C00_RS10460	SM00387	Histidine kinase-like ATPases
A9C00_RS10460	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS10480	SM00387	Histidine kinase-like ATPases
A9C00_RS10480	SM00433	TopoisomeraseII
A9C00_RS10580	SM00244	prohibitin homologues
A9C00_RS10605	SM01118	A9C00_RS10605
A9C00_RS10615	SM00287	Bacterial SH3 domain homologues
A9C00_RS10630	SM00905	Dihydroneopterin aldolase
A9C00_RS10635	SM01207	A9C00_RS10635
A9C00_RS10675	SM00400	zinc finger
A9C00_RS10675	SM00493	A9C00_RS10675
A9C00_RS10675	SM00766	DNA primase DnaG DnaB-binding
A9C00_RS10705	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A9C00_RS10705	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9C00_RS10720	SM00354	helix_turn _helix lactose operon repressor
A9C00_RS10725	SM01038	Beta galactosidase small chain
A9C00_RS10790	SM00858	A9C00_RS10790
A9C00_RS10835	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9C00_RS10835	SM00895	A9C00_RS10835
A9C00_RS11000	SM00858	A9C00_RS11000
A9C00_RS11015	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9C00_RS11015	SM01134	A9C00_RS11015
A9C00_RS11120	SM00749	bacterial OsmY and nodulation domain
A9C00_RS11130	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A9C00_RS11145	SM00465	GIY-YIG type nucleases (URI domain)
A9C00_RS11185	SM00487	DEAD-like helicases superfamily
A9C00_RS11185	SM00490	helicase superfamily c-terminal domain
A9C00_RS11190	SM00028	Tetratricopeptide repeats
A9C00_RS11195	SM00316	Ribosomal protein S1-like RNA-binding domain
A9C00_RS11195	SM00322	K homology RNA-binding domain
A9C00_RS11200	SM01387	A9C00_RS11200
A9C00_RS11220	SM00316	Ribosomal protein S1-like RNA-binding domain
A9C00_RS11265	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS11275	SM01103	A9C00_RS11275
A9C00_RS11350	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS11380	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS11425	SM00073	Histidine Phosphotransfer domain
A9C00_RS11425	SM00091	PAS domain
A9C00_RS11425	SM00387	Histidine kinase-like ATPases
A9C00_RS11425	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS11425	SM00448	cheY-homologous receiver domain
A9C00_RS11430	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9C00_RS11475	SM01130	A9C00_RS11475
A9C00_RS11480	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9C00_RS11480	SM00895	A9C00_RS11480
A9C00_RS11520	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9C00_RS11525	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9C00_RS11580	SM00316	Ribosomal protein S1-like RNA-binding domain
A9C00_RS11610	SM00052	Putative diguanylate phosphodiesterase
A9C00_RS11610	SM00267	diguanylate cyclase
A9C00_RS11615	SM00829	Enoylreductase
A9C00_RS11640	SM00878	Biotin carboxylase C-terminal domain
A9C00_RS11705	SM00062	Bacterial periplasmic substrate-binding proteins
A9C00_RS11720	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS11825	SM00422	helix_turn_helix, mercury resistance
A9C00_RS11840	SM00662	RNA polymerases D
A9C00_RS11845	SM00363	S4 RNA-binding domain
A9C00_RS11845	SM01390	A9C00_RS11845
A9C00_RS11910	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A9C00_RS11915	SM01374	A9C00_RS11915
A9C00_RS11935	SM00322	K homology RNA-binding domain
A9C00_RS11950	SM01382	A9C00_RS11950
A9C00_RS11950	SM01383	A9C00_RS11950
A9C00_RS11970	SM01403	A9C00_RS11970
A9C00_RS12000	SM00838	Elongation factor G C-terminus
A9C00_RS12000	SM00889	Elongation factor G, domain IV
A9C00_RS12065	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS12095	SM00100	Cyclic nucleotide-monophosphate binding domain
A9C00_RS12095	SM00419	helix_turn_helix, cAMP Regulatory protein
A9C00_RS12235	SM00965	Secretin and TonB N terminus short domain
A9C00_RS12280	SM00363	S4 RNA-binding domain
A9C00_RS12315	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9C00_RS12315	SM00387	Histidine kinase-like ATPases
A9C00_RS12315	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS12320	SM00448	cheY-homologous receiver domain
A9C00_RS12320	SM00862	Transcriptional regulatory protein, C terminal
A9C00_RS12330	SM00316	Ribosomal protein S1-like RNA-binding domain
A9C00_RS12330	SM00732	Likely ribonuclease with RNase H fold.
A9C00_RS12335	SM00899	A9C00_RS12335
A9C00_RS12385	SM00421	helix_turn_helix, Lux Regulon
A9C00_RS12400	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS12405	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9C00_RS12405	SM01134	A9C00_RS12405
A9C00_RS12415	SM00450	Rhodanese Homology Domain
A9C00_RS12460	SM00642	Alpha-amylase domain
A9C00_RS12465	SM00642	Alpha-amylase domain
A9C00_RS12470	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A9C00_RS12485	SM00487	DEAD-like helicases superfamily
A9C00_RS12485	SM00490	helicase superfamily c-terminal domain
A9C00_RS12500	SM00354	helix_turn _helix lactose operon repressor
A9C00_RS12550	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS12575	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS12580	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS12630	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS12635	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS12635	SM00962	SRP54-type protein, GTPase domain
A9C00_RS12635	SM00963	SRP54-type protein, helical bundle domain
A9C00_RS12710	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS12715	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS12740	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS12780	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9C00_RS12780	SM00387	Histidine kinase-like ATPases
A9C00_RS12780	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS12785	SM00448	cheY-homologous receiver domain
A9C00_RS12785	SM00862	Transcriptional regulatory protein, C terminal
A9C00_RS12840	SM00746	metallochaperone-like domain
A9C00_RS12870	SM00448	cheY-homologous receiver domain
A9C00_RS12870	SM00862	Transcriptional regulatory protein, C terminal
A9C00_RS12875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9C00_RS12875	SM00387	Histidine kinase-like ATPases
A9C00_RS12875	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS12905	SM00530	Helix-turn-helix XRE-family like proteins 
A9C00_RS12920	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS12990	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A9C00_RS13005	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A9C00_RS13030	SM00421	helix_turn_helix, Lux Regulon
A9C00_RS13075	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS13090	SM01235	A9C00_RS13090
A9C00_RS13100	SM00421	helix_turn_helix, Lux Regulon
A9C00_RS13125	SM00052	Putative diguanylate phosphodiesterase
A9C00_RS13150	SM00052	Putative diguanylate phosphodiesterase
A9C00_RS13150	SM00267	diguanylate cyclase
A9C00_RS13155	SM00028	Tetratricopeptide repeats
A9C00_RS13225	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS13230	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS13325	SM00530	Helix-turn-helix XRE-family like proteins 
A9C00_RS13330	SM00357	Cold shock protein domain
A9C00_RS13395	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS13405	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS13410	SM00047	Lysozyme subfamily 2
A9C00_RS13415	SM00642	Alpha-amylase domain
A9C00_RS13435	SM00346	helix_turn_helix isocitrate lyase regulation
A9C00_RS13470	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A9C00_RS13480	SM01007	Class II Aldolase and Adducin N-terminal domain
A9C00_RS13615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9C00_RS13615	SM00895	A9C00_RS13615
A9C00_RS13630	SM00971	Serine acetyltransferase, N-terminal
A9C00_RS13650	SM00450	Rhodanese Homology Domain
A9C00_RS13675	SM00829	Enoylreductase
A9C00_RS13755	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A9C00_RS13755	SM01232	A9C00_RS13755
A9C00_RS13825	SM00532	Ligase N family
A9C00_RS13830	SM00072	Guanylate kinase homologues.
A9C00_RS13835	SM01409	A9C00_RS13835
A9C00_RS13840	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9C00_RS13840	SM00954	Region found in RelA / SpoT proteins
A9C00_RS13850	SM00487	DEAD-like helicases superfamily
A9C00_RS13850	SM00490	helicase superfamily c-terminal domain
A9C00_RS13950	SM00387	Histidine kinase-like ATPases
A9C00_RS13955	SM00421	helix_turn_helix, Lux Regulon
A9C00_RS13955	SM00448	cheY-homologous receiver domain
A9C00_RS14025	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS14040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9C00_RS14040	SM00866	A9C00_RS14040
A9C00_RS14080	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A9C00_RS14095	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9C00_RS14095	SM00895	A9C00_RS14095
A9C00_RS14120	SM00387	Histidine kinase-like ATPases
A9C00_RS14120	SM00433	TopoisomeraseII
A9C00_RS14130	SM00480	DNA polymerase III beta subunit
A9C00_RS14135	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS14135	SM00760	Bacterial dnaA protein helix-turn-helix domain
A9C00_RS14150	SM01234	A9C00_RS14150
A9C00_RS14255	SM01061	CAT RNA binding domain
A9C00_RS14265	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS14320	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS14365	SM01228	A9C00_RS14365
A9C00_RS14375	SM00344	helix_turn_helix ASNC type
A9C00_RS14385	SM00327	von Willebrand factor (vWF) type A domain
A9C00_RS14390	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS14405	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS14425	SM00354	helix_turn _helix lactose operon repressor
A9C00_RS14435	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9C00_RS14435	SM00895	A9C00_RS14435
A9C00_RS14480	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS14545	SM00487	DEAD-like helicases superfamily
A9C00_RS14545	SM00490	helicase superfamily c-terminal domain
A9C00_RS14560	SM00357	Cold shock protein domain
A9C00_RS14560	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS14560	SM00959	Rho termination factor, N-terminal domain
A9C00_RS14585	SM00984	UDP binding domain
A9C00_RS14690	SM01219	A9C00_RS14690
A9C00_RS14775	SM00341	Helicase and RNase D C-terminal
A9C00_RS14775	SM00487	DEAD-like helicases superfamily
A9C00_RS14775	SM00490	helicase superfamily c-terminal domain
A9C00_RS14775	SM00956	A9C00_RS14775
A9C00_RS14865	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A9C00_RS14965	SM00563	Phosphate acyltransferases
A9C00_RS14980	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A9C00_RS14980	SM00474	3'-5' exonuclease
A9C00_RS14980	SM00475	5'-3' exonuclease
A9C00_RS14980	SM00482	DNA polymerase A domain
A9C00_RS14995	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9C00_RS15005	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS15005	SM00448	cheY-homologous receiver domain
A9C00_RS15010	SM00091	PAS domain
A9C00_RS15010	SM00387	Histidine kinase-like ATPases
A9C00_RS15010	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS15015	SM01230	A9C00_RS15015
A9C00_RS15030	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9C00_RS15030	SM00866	A9C00_RS15030
A9C00_RS15075	SM01133	A9C00_RS15075
A9C00_RS15090	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9C00_RS15090	SM01134	A9C00_RS15090
A9C00_RS15125	SM00530	Helix-turn-helix XRE-family like proteins 
A9C00_RS15165	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A9C00_RS15205	SM01007	Class II Aldolase and Adducin N-terminal domain
A9C00_RS15225	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS15230	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS15260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9C00_RS15260	SM00387	Histidine kinase-like ATPases
A9C00_RS15260	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS15265	SM00448	cheY-homologous receiver domain
A9C00_RS15265	SM00862	Transcriptional regulatory protein, C terminal
A9C00_RS15360	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS15360	SM01086	C-terminal, D2-small domain, of ClpB protein
A9C00_RS15375	SM00354	helix_turn _helix lactose operon repressor
A9C00_RS15380	SM00487	DEAD-like helicases superfamily
A9C00_RS15380	SM00490	helicase superfamily c-terminal domain
A9C00_RS15515	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS15535	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A9C00_RS15550	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A9C00_RS15665	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A9C00_RS15665	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A9C00_RS15670	SM00649	Ribosomal protein L11/L12
A9C00_RS15695	SM00663	RNA polymerase I subunit A N-terminus
A9C00_RS15705	SM00876	Biotin and Thiamin Synthesis associated domain
A9C00_RS15760	SM00411	bacterial (prokaryotic) histone like domain
A9C00_RS15775	SM00387	Histidine kinase-like ATPases
A9C00_RS15775	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS15780	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS15780	SM00448	cheY-homologous receiver domain
A9C00_RS15785	SM01209	A9C00_RS15785
A9C00_RS15785	SM01210	A9C00_RS15785
A9C00_RS15790	SM00798	AICARFT/IMPCHase bienzyme
A9C00_RS15790	SM00851	MGS-like domain
A9C00_RS15860	SM00346	helix_turn_helix isocitrate lyase regulation
A9C00_RS15865	SM01018	B12 binding domain
A9C00_RS15880	SM00363	S4 RNA-binding domain
A9C00_RS15890	SM00244	prohibitin homologues
A9C00_RS15975	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS16010	SM00563	Phosphate acyltransferases
A9C00_RS16060	SM00829	Enoylreductase
A9C00_RS16065	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS16070	SM01005	Alanine racemase, C-terminal domain
A9C00_RS16125	SM00052	Putative diguanylate phosphodiesterase
A9C00_RS16130	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS16135	SM00422	helix_turn_helix, mercury resistance
A9C00_RS16200	SM00028	Tetratricopeptide repeats
A9C00_RS16210	SM00671	Sel1-like repeats.
A9C00_RS16220	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A9C00_RS16245	SM00849	Metallo-beta-lactamase superfamily
A9C00_RS16270	SM00072	Guanylate kinase homologues.
A9C00_RS16280	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS16285	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS16310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9C00_RS16310	SM00866	A9C00_RS16310
A9C00_RS16325	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS16360	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9C00_RS16360	SM00387	Histidine kinase-like ATPases
A9C00_RS16360	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS16365	SM00448	cheY-homologous receiver domain
A9C00_RS16365	SM00862	Transcriptional regulatory protein, C terminal
A9C00_RS16380	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS16390	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS16445	SM00448	cheY-homologous receiver domain
A9C00_RS16450	SM00091	PAS domain
A9C00_RS16450	SM00387	Histidine kinase-like ATPases
A9C00_RS16500	SM00862	Transcriptional regulatory protein, C terminal
A9C00_RS16550	SM00883	Chaperonin 10 Kd subunit
A9C00_RS16575	SM00841	Elongation factor P, C-terminal
A9C00_RS16575	SM01185	A9C00_RS16575
A9C00_RS16650	SM00479	A9C00_RS16650
A9C00_RS16685	SM00646	A9C00_RS16685
A9C00_RS16690	SM00853	MutL C terminal dimerisation domain
A9C00_RS16690	SM01340	A9C00_RS16690
A9C00_RS16710	SM00244	prohibitin homologues
A9C00_RS16715	SM00244	prohibitin homologues
A9C00_RS16725	SM00788	Adenylosuccinate synthetase
A9C00_RS16735	SM00316	Ribosomal protein S1-like RNA-binding domain
A9C00_RS16735	SM00357	Cold shock protein domain
A9C00_RS16735	SM00955	A9C00_RS16735
A9C00_RS16740	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A9C00_RS16795	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9C00_RS16795	SM01134	A9C00_RS16795
A9C00_RS16820	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A9C00_RS16830	SM01007	Class II Aldolase and Adducin N-terminal domain
A9C00_RS16890	SM00882	Coenzyme A transferase
A9C00_RS16975	SM01091	Transporter associated domain
A9C00_RS17005	SM00966	SpoVT / AbrB like domain 
A9C00_RS17025	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS17075	SM00642	Alpha-amylase domain
A9C00_RS17085	SM00354	helix_turn _helix lactose operon repressor
A9C00_RS17090	SM00831	Cation transporter/ATPase, N-terminus
A9C00_RS17125	SM00822	A9C00_RS17125
A9C00_RS17195	SM00829	Enoylreductase
A9C00_RS17225	SM00487	DEAD-like helicases superfamily
A9C00_RS17225	SM00490	helicase superfamily c-terminal domain
A9C00_RS17375	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9C00_RS17375	SM00895	A9C00_RS17375
A9C00_RS17465	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9C00_RS17495	SM00487	DEAD-like helicases superfamily
A9C00_RS17515	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A9C00_RS17535	SM00903	Flavin reductase like domain
A9C00_RS17545	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS17585	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9C00_RS17590	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A9C00_RS17590	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9C00_RS17590	SM00319	Homologues of the ligand binding domain of Tar
A9C00_RS17600	SM00895	A9C00_RS17600
A9C00_RS17605	SM00829	Enoylreductase
A9C00_RS17620	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS17645	SM00421	helix_turn_helix, Lux Regulon
A9C00_RS17725	SM00530	Helix-turn-helix XRE-family like proteins 
A9C00_RS17730	SM00530	Helix-turn-helix XRE-family like proteins 
A9C00_RS17775	SM01252	A9C00_RS17775
A9C00_RS17780	SM00507	HNH nucleases
A9C00_RS17875	SM00635	Bacterial Ig-like domain 2
A9C00_RS17955	SM00749	bacterial OsmY and nodulation domain
A9C00_RS17990	SM01133	A9C00_RS17990
A9C00_RS17995	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
A9C00_RS18030	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS18035	SM00530	Helix-turn-helix XRE-family like proteins 
A9C00_RS18045	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS18065	SM00855	Phosphoglycerate mutase family
A9C00_RS18070	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS18070	SM00871	Bacterial transcription activator, effector binding domain
A9C00_RS18080	SM00448	cheY-homologous receiver domain
A9C00_RS18080	SM00862	Transcriptional regulatory protein, C terminal
A9C00_RS18085	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9C00_RS18085	SM00387	Histidine kinase-like ATPases
A9C00_RS18085	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS18095	SM00448	cheY-homologous receiver domain
A9C00_RS18095	SM00862	Transcriptional regulatory protein, C terminal
A9C00_RS18155	SM00852	Probable molybdopterin binding domain
A9C00_RS18180	SM00271	DnaJ molecular chaperone homology domain
A9C00_RS18230	SM00904	Riboflavin kinase
A9C00_RS18275	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A9C00_RS18280	SM00851	MGS-like domain
A9C00_RS18280	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A9C00_RS18325	SM00893	Electron transfer flavoprotein domain
A9C00_RS18330	SM00893	Electron transfer flavoprotein domain
A9C00_RS18375	SM00650	Ribosomal RNA adenine dimethylases
A9C00_RS18395	SM00271	DnaJ molecular chaperone homology domain
A9C00_RS18410	SM00487	DEAD-like helicases superfamily
A9C00_RS18410	SM00490	helicase superfamily c-terminal domain
A9C00_RS18415	SM00486	DNA polymerase type-B family
A9C00_RS18420	SM01007	Class II Aldolase and Adducin N-terminal domain
A9C00_RS18435	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS18445	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS18485	SM01329	A9C00_RS18485
A9C00_RS18490	SM00917	LeuA allosteric (dimerisation) domain
A9C00_RS18520	SM00354	helix_turn _helix lactose operon repressor
A9C00_RS18590	SM00842	Cell division protein FtsA
A9C00_RS18595	SM00864	Tubulin/FtsZ family, GTPase domain
A9C00_RS18595	SM00865	Tubulin/FtsZ family, C-terminal domain
A9C00_RS18610	SM00957	SecA DEAD-like domain
A9C00_RS18610	SM00958	SecA preprotein cross-linking domain
A9C00_RS18640	SM01240	A9C00_RS18640
A9C00_RS18670	SM00644	A9C00_RS18670
A9C00_RS18685	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9C00_RS18685	SM00895	A9C00_RS18685
A9C00_RS18745	SM00564	beta-propeller repeat
A9C00_RS18755	SM00947	Carbonic anhydrase
A9C00_RS18760	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS18865	SM00487	DEAD-like helicases superfamily
A9C00_RS18865	SM00490	helicase superfamily c-terminal domain
A9C00_RS18865	SM00847	Helicase associated domain (HA2)  Add an annotation
A9C00_RS18885	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS18930	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9C00_RS18935	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9C00_RS18955	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9C00_RS19000	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9C00_RS19010	SM00935	Outer membrane protein (OmpH-like)
A9C00_RS19040	SM00481	DNA polymerase alpha chain like domain
A9C00_RS19060	SM00977	TilS substrate C-terminal domain
A9C00_RS19075	SM01322	A9C00_RS19075
A9C00_RS19130	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS19130	SM00930	A9C00_RS19130
A9C00_RS19190	SM00257	Lysin motif
A9C00_RS19195	SM00849	Metallo-beta-lactamase superfamily
A9C00_RS19210	SM00479	A9C00_RS19210
A9C00_RS19260	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS19260	SM01086	C-terminal, D2-small domain, of ClpB protein
A9C00_RS19500	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A9C00_RS19525	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
A9C00_RS19530	SM01092	CO dehydrogenase flavoprotein C-terminal domain
A9C00_RS19575	SM00421	helix_turn_helix, Lux Regulon
A9C00_RS19600	SM00634	Bacterial Ig-like domain (group 1)
A9C00_RS19605	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS19605	SM00871	Bacterial transcription activator, effector binding domain
A9C00_RS19630	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS19675	SM00869	Autotransporter beta-domain
A9C00_RS19680	SM00052	Putative diguanylate phosphodiesterase
A9C00_RS19680	SM00421	helix_turn_helix, Lux Regulon
A9C00_RS19695	SM00248	ankyrin repeats
A9C00_RS19730	SM01022	A9C00_RS19730
A9C00_RS19740	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS19755	SM00829	Enoylreductase
A9C00_RS19780	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS19825	SM00947	Carbonic anhydrase
A9C00_RS19830	SM01116	A9C00_RS19830
A9C00_RS19840	SM01266	A9C00_RS19840
A9C00_RS19850	SM01038	Beta galactosidase small chain
A9C00_RS19860	SM00346	helix_turn_helix isocitrate lyase regulation
A9C00_RS19885	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A9C00_RS19910	SM00829	Enoylreductase
A9C00_RS19940	SM00062	Bacterial periplasmic substrate-binding proteins
A9C00_RS19945	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS19960	SM01004	Delta-aminolevulinic acid dehydratase
A9C00_RS19965	SM00869	Autotransporter beta-domain
A9C00_RS20020	SM00098	Alkaline phosphatase homologues
A9C00_RS20030	SM00267	diguanylate cyclase
A9C00_RS20100	SM00448	cheY-homologous receiver domain
A9C00_RS20100	SM00862	Transcriptional regulatory protein, C terminal
A9C00_RS20105	SM00091	PAS domain
A9C00_RS20105	SM00387	Histidine kinase-like ATPases
A9C00_RS20105	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS20120	SM00642	Alpha-amylase domain
A9C00_RS20140	SM01323	A9C00_RS20140
A9C00_RS20155	SM00507	HNH nucleases
A9C00_RS20210	SM00861	Transketolase, pyrimidine binding domain
A9C00_RS20225	SM00981	A9C00_RS20225
A9C00_RS20250	SM00671	Sel1-like repeats.
A9C00_RS20320	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS20320	SM00994	ClpX C4-type zinc finger
A9C00_RS20320	SM01086	C-terminal, D2-small domain, of ClpB protein
A9C00_RS20325	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS20325	SM00464	Found in ATP-dependent protease La (LON)
A9C00_RS20330	SM00411	bacterial (prokaryotic) histone like domain
A9C00_RS20340	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A9C00_RS20365	SM00344	helix_turn_helix ASNC type
A9C00_RS20370	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS20375	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS20380	SM00938	Nitrogen regulatory protein P-II
A9C00_RS20415	SM00052	Putative diguanylate phosphodiesterase
A9C00_RS20425	SM01266	A9C00_RS20425
A9C00_RS20485	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS20495	SM00493	A9C00_RS20495
A9C00_RS20500	SM00387	Histidine kinase-like ATPases
A9C00_RS20550	SM00530	Helix-turn-helix XRE-family like proteins 
A9C00_RS20570	SM00422	helix_turn_helix, mercury resistance
A9C00_RS20580	SM00244	prohibitin homologues
A9C00_RS20585	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS20600	SM00822	A9C00_RS20600
A9C00_RS20610	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS20645	SM00450	Rhodanese Homology Domain
A9C00_RS20660	SM00346	helix_turn_helix isocitrate lyase regulation
A9C00_RS20740	SM01001	AIR carboxylase
A9C00_RS20755	SM00840	A9C00_RS20755
A9C00_RS20800	SM00421	helix_turn_helix, Lux Regulon
A9C00_RS20800	SM00448	cheY-homologous receiver domain
A9C00_RS20810	SM00342	helix_turn_helix, arabinose operon control protein
A9C00_RS20820	SM00028	Tetratricopeptide repeats
A9C00_RS20875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9C00_RS20875	SM00387	Histidine kinase-like ATPases
A9C00_RS20875	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS20880	SM00448	cheY-homologous receiver domain
A9C00_RS20880	SM00862	Transcriptional regulatory protein, C terminal
A9C00_RS20970	SM00923	MbtH-like protein
A9C00_RS20975	SM00823	Phosphopantetheine attachment site
A9C00_RS20975	SM00824	Thioesterase
A9C00_RS20985	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS21025	SM00822	A9C00_RS21025
A9C00_RS21055	SM00470	ParB-like nuclease domain
A9C00_RS21140	SM00764	Citrate lyase ligase C-terminal domain
A9C00_RS21145	SM00091	PAS domain
A9C00_RS21145	SM00387	Histidine kinase-like ATPases
A9C00_RS21150	SM00448	cheY-homologous receiver domain
A9C00_RS21165	SM00357	Cold shock protein domain
A9C00_RS21185	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9C00_RS21210	SM00936	Penicillin-binding protein 5, C-terminal domain 
A9C00_RS21240	SM00855	Phosphoglycerate mutase family
A9C00_RS21270	SM00671	Sel1-like repeats.
A9C00_RS21280	SM00271	DnaJ molecular chaperone homology domain
A9C00_RS21285	SM00671	Sel1-like repeats.
A9C00_RS21315	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS21330	SM00062	Bacterial periplasmic substrate-binding proteins
A9C00_RS21345	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9C00_RS21345	SM01091	Transporter associated domain
A9C00_RS21360	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9C00_RS21505	SM00448	cheY-homologous receiver domain
A9C00_RS21505	SM00862	Transcriptional regulatory protein, C terminal
A9C00_RS21510	SM00387	Histidine kinase-like ATPases
A9C00_RS21510	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS21590	SM00796	Allophanate hydrolase subunit 1
A9C00_RS21595	SM00797	Allophanate hydrolase subunit 2
A9C00_RS21605	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A9C00_RS21605	SM01232	A9C00_RS21605
A9C00_RS21670	SM00861	Transketolase, pyrimidine binding domain
A9C00_RS21685	SM00881	CoA binding domain
A9C00_RS21690	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9C00_RS21690	SM00866	A9C00_RS21690
A9C00_RS21700	SM00872	Alpha mannosidase, middle domain
A9C00_RS21850	SM00855	Phosphoglycerate mutase family
A9C00_RS21875	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS21900	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS22010	SM00530	Helix-turn-helix XRE-family like proteins 
A9C00_RS22070	SM00857	Resolvase, N terminal domain
A9C00_RS22230	SM00885	D5 N terminal like
A9C00_RS22310	SM00635	Bacterial Ig-like domain 2
A9C00_RS22340	SM00232	JAB/MPN domain
A9C00_RS22395	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9C00_RS22395	SM00876	Biotin and Thiamin Synthesis associated domain
A9C00_RS22415	SM00487	DEAD-like helicases superfamily
A9C00_RS22415	SM00490	helicase superfamily c-terminal domain
A9C00_RS22425	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9C00_RS22430	SM00852	Probable molybdopterin binding domain
A9C00_RS22465	SM00155	Phospholipase D. Active site motifs.
A9C00_RS22490	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS22505	SM00487	DEAD-like helicases superfamily
A9C00_RS22505	SM00490	helicase superfamily c-terminal domain
A9C00_RS22520	SM00487	DEAD-like helicases superfamily
A9C00_RS22520	SM00488	A9C00_RS22520
A9C00_RS22520	SM00491	A9C00_RS22520
A9C00_RS22545	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
A9C00_RS22575	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS22585	SM00062	Bacterial periplasmic substrate-binding proteins
A9C00_RS22585	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A9C00_RS22620	SM00529	Helix-turn-helix diphteria tox regulatory element
A9C00_RS22635	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS22675	SM00852	Probable molybdopterin binding domain
A9C00_RS22685	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS22705	SM00052	Putative diguanylate phosphodiesterase
A9C00_RS22710	SM00267	diguanylate cyclase
A9C00_RS22715	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9C00_RS22735	SM00936	Penicillin-binding protein 5, C-terminal domain 
A9C00_RS22740	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9C00_RS22740	SM01134	A9C00_RS22740
A9C00_RS22745	SM00014	Acid phosphatase homologues
A9C00_RS22955	SM00857	Resolvase, N terminal domain
A9C00_RS23045	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS23070	SM00062	Bacterial periplasmic substrate-binding proteins
A9C00_RS23070	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A9C00_RS23085	SM00062	Bacterial periplasmic substrate-binding proteins
A9C00_RS23085	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A9C00_RS23090	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS23105	SM00644	A9C00_RS23105
A9C00_RS23170	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS23175	SM00357	Cold shock protein domain
A9C00_RS23185	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS23185	SM01086	C-terminal, D2-small domain, of ClpB protein
A9C00_RS23195	SM00316	Ribosomal protein S1-like RNA-binding domain
A9C00_RS23205	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS23210	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS23220	SM00344	helix_turn_helix ASNC type
A9C00_RS23225	SM00843	A9C00_RS23225
A9C00_RS23235	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS23245	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A9C00_RS23330	SM00316	Ribosomal protein S1-like RNA-binding domain
A9C00_RS23335	SM00411	bacterial (prokaryotic) histone like domain
A9C00_RS23340	SM00849	Metallo-beta-lactamase superfamily
A9C00_RS23345	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS23410	SM00849	Metallo-beta-lactamase superfamily
A9C00_RS23445	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS23460	SM00062	Bacterial periplasmic substrate-binding proteins
A9C00_RS23520	SM00981	A9C00_RS23520
A9C00_RS23525	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS23600	SM00851	MGS-like domain
A9C00_RS23615	SM00881	CoA binding domain
A9C00_RS23620	SM00992	Hemimethylated DNA-binding protein YccV like
A9C00_RS23625	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A9C00_RS23705	SM00226	Low molecular weight phosphatase family
A9C00_RS23735	SM00357	Cold shock protein domain
A9C00_RS23740	SM00357	Cold shock protein domain
A9C00_RS23760	SM00073	Histidine Phosphotransfer domain
A9C00_RS23760	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9C00_RS23760	SM00387	Histidine kinase-like ATPases
A9C00_RS23760	SM00388	His Kinase A (phosphoacceptor) domain
A9C00_RS23760	SM00448	cheY-homologous receiver domain
A9C00_RS23770	SM00448	cheY-homologous receiver domain
A9C00_RS23770	SM00862	Transcriptional regulatory protein, C terminal
A9C00_RS23795	SM00271	DnaJ molecular chaperone homology domain
A9C00_RS23835	SM00903	Flavin reductase like domain
A9C00_RS23930	SM00028	Tetratricopeptide repeats
A9C00_RS23935	SM00267	diguanylate cyclase
A9C00_RS24005	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS24020	SM00267	diguanylate cyclase
A9C00_RS24055	SM00354	helix_turn _helix lactose operon repressor
A9C00_RS24070	SM00640	Glycosyl hydrolases family 32
A9C00_RS24195	SM00487	DEAD-like helicases superfamily
A9C00_RS24295	SM00481	DNA polymerase alpha chain like domain
A9C00_RS24325	SM00421	helix_turn_helix, Lux Regulon
A9C00_RS24355	SM00506	Appr-1"-p processing enzyme
A9C00_RS24360	SM00155	Phospholipase D. Active site motifs.
A9C00_RS24415	SM00450	Rhodanese Homology Domain
A9C00_RS24420	SM00867	YceI-like domain 
A9C00_RS24500	SM00858	A9C00_RS24500
A9C00_RS24545	SM00047	Lysozyme subfamily 2
A9C00_RS24560	SM00316	Ribosomal protein S1-like RNA-binding domain
A9C00_RS24570	SM00363	S4 RNA-binding domain
A9C00_RS24600	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A9C00_RS24605	SM00822	A9C00_RS24605
A9C00_RS24615	SM00825	Beta-ketoacyl synthase
A9C00_RS24715	SM00257	Lysin motif
A9C00_RS24720	SM00487	DEAD-like helicases superfamily
A9C00_RS24720	SM00490	helicase superfamily c-terminal domain
A9C00_RS24720	SM00982	A9C00_RS24720
A9C00_RS24720	SM01058	CarD-like/TRCF domain
A9C00_RS24735	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS24780	SM00382	ATPases associated with a variety of cellular activities
A9C00_RS24795	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
A9C00_RS24800	SM00387	Histidine kinase-like ATPases
A9C00_RS24805	SM00448	cheY-homologous receiver domain
A9C00_RS24805	SM00862	Transcriptional regulatory protein, C terminal
A9C00_RS24835	SM01329	A9C00_RS24835
A9C00_RS26015	SM00052	Putative diguanylate phosphodiesterase
