locus-tag class description CNQ55_RS00005 PF13932 GidA associated domain CNQ55_RS00005 PF01134 Glucose inhibited division protein A CNQ55_RS00010 PF02527 rRNA small subunit methyltransferase G CNQ55_RS00015 PF03899 ATP synthase I chain CNQ55_RS00025 PF00137 ATP synthase subunit C CNQ55_RS00030 PF00430 ATP synthase B/B' CF(0) CNQ55_RS00035 PF00213 ATP synthase delta (OSCP) subunit CNQ55_RS00040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CNQ55_RS00040 PF00306 ATP synthase alpha/beta chain, C terminal domain CNQ55_RS00040 PF02874 ATP synthase alpha/beta family, beta-barrel domain CNQ55_RS00045 PF00231 ATP synthase CNQ55_RS00050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CNQ55_RS00050 PF02874 ATP synthase alpha/beta family, beta-barrel domain CNQ55_RS00055 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CNQ55_RS00055 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CNQ55_RS00060 PF12804 MobA-like NTP transferase domain CNQ55_RS00060 PF00132 Bacterial transferase hexapeptide (six repeats) CNQ55_RS00060 PF14602 Hexapeptide repeat of succinyl-transferase CNQ55_RS00065 PF01380 SIS domain CNQ55_RS00070 PF12849 PBP superfamily domain CNQ55_RS00075 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS00080 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS00085 PF00005 ABC transporter CNQ55_RS00090 PF01895 PhoU domain CNQ55_RS00095 PF03123 CAT RNA binding domain CNQ55_RS00095 PF00874 PRD domain CNQ55_RS00100 PF02378 Phosphotransferase system, EIIC CNQ55_RS00100 PF00367 phosphotransferase system, EIIB CNQ55_RS00100 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CNQ55_RS00105 PF00232 Glycosyl hydrolase family 1 CNQ55_RS00110 PF11471 Maltoporin periplasmic N-terminal extension CNQ55_RS00110 PF02264 LamB porin CNQ55_RS00115 PF00756 Putative esterase CNQ55_RS00115 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CNQ55_RS00120 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CNQ55_RS00130 PF13419 Haloacid dehalogenase-like hydrolase CNQ55_RS00135 PF00860 Permease family CNQ55_RS00140 PF03358 NADPH-dependent FMN reductase CNQ55_RS00150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS00150 PF03466 LysR substrate binding domain CNQ55_RS00155 PF07690 Major Facilitator Superfamily CNQ55_RS00160 PF03222 Tryptophan/tyrosine permease family CNQ55_RS00165 PF01212 Beta-eliminating lyase CNQ55_RS00170 PF08053 Tryptophanase operon leader peptide CNQ55_RS00175 PF12631 MnmE helical domain CNQ55_RS00175 PF01926 50S ribosome-binding GTPase CNQ55_RS00175 PF10396 GTP-binding protein TrmE N-terminus CNQ55_RS00180 PF14849 YidC periplasmic domain CNQ55_RS00180 PF02096 60Kd inner membrane protein CNQ55_RS00185 PF01809 Putative membrane protein insertion efficiency factor CNQ55_RS00190 PF00825 Ribonuclease P CNQ55_RS00195 PF00468 Ribosomal protein L34 CNQ55_RS00205 PF08299 Bacterial dnaA protein helix-turn-helix CNQ55_RS00205 PF00308 Bacterial dnaA protein CNQ55_RS00205 PF11638 DnaA N-terminal domain CNQ55_RS00210 PF02768 DNA polymerase III beta subunit, C-terminal domain CNQ55_RS00210 PF02767 DNA polymerase III beta subunit, central domain CNQ55_RS00210 PF00712 DNA polymerase III beta subunit, N-terminal domain CNQ55_RS00215 PF02463 RecF/RecN/SMC N terminal domain CNQ55_RS00220 PF01751 Toprim domain CNQ55_RS00220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS00220 PF18053 DNA gyrase B subunit insert domain CNQ55_RS00220 PF00204 DNA gyrase B CNQ55_RS00220 PF00986 DNA gyrase B subunit, carboxyl terminus CNQ55_RS00225 PF06078 Bacterial protein of unknown function (DUF937) CNQ55_RS00240 PF07729 FCD domain CNQ55_RS00240 PF00392 Bacterial regulatory proteins, gntR family CNQ55_RS00245 PF05035 2-keto-3-deoxy-galactonokinase CNQ55_RS00250 PF01081 KDPG and KHG aldolase CNQ55_RS00255 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CNQ55_RS00255 PF13378 Enolase C-terminal domain-like CNQ55_RS00260 PF07690 Major Facilitator Superfamily CNQ55_RS00265 PF01494 FAD binding domain CNQ55_RS00270 PF12566 Protein of unknown function (DUF3748) CNQ55_RS00270 PF07676 WD40-like Beta Propeller Repeat CNQ55_RS00275 PF07119 Protein of unknown function (DUF1375) CNQ55_RS00280 PF00011 Hsp20/alpha crystallin family CNQ55_RS00285 PF00011 Hsp20/alpha crystallin family CNQ55_RS00290 PF02080 TrkA-C domain CNQ55_RS00290 PF06826 Predicted Permease Membrane Region CNQ55_RS00295 PF12833 Helix-turn-helix domain CNQ55_RS00295 PF02311 AraC-like ligand binding domain CNQ55_RS00300 PF00474 Sodium:solute symporter family CNQ55_RS00305 PF16347 Domain of unknown function (DUF4976) CNQ55_RS00305 PF00884 Sulfatase CNQ55_RS00310 PF02656 Domain of unknown function (DUF202) CNQ55_RS00315 PF02656 Domain of unknown function (DUF202) CNQ55_RS00325 PF07690 Major Facilitator Superfamily CNQ55_RS00335 PF08049 IlvB leader peptide CNQ55_RS00340 PF00205 Thiamine pyrophosphate enzyme, central domain CNQ55_RS00340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CNQ55_RS00340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CNQ55_RS00345 PF01842 ACT domain CNQ55_RS00365 PF00072 Response regulator receiver domain CNQ55_RS00365 PF00196 Bacterial regulatory proteins, luxR family CNQ55_RS00370 PF07730 Histidine kinase CNQ55_RS00370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS00370 PF05231 MASE1 CNQ55_RS00375 PF07690 Major Facilitator Superfamily CNQ55_RS00380 PF07690 Major Facilitator Superfamily CNQ55_RS00385 PF13382 Adenine deaminase C-terminal domain CNQ55_RS00385 PF01979 Amidohydrolase family CNQ55_RS00390 PF00860 Permease family CNQ55_RS00395 PF06711 Protein of unknown function (DUF1198) CNQ55_RS00405 PF07690 Major Facilitator Superfamily CNQ55_RS00415 PF03180 NLPA lipoprotein CNQ55_RS00420 PF00892 EamA-like transporter family CNQ55_RS00450 PF13802 Galactose mutarotase-like CNQ55_RS00450 PF01055 Glycosyl hydrolases family 31 CNQ55_RS00455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CNQ55_RS00455 PF08279 HTH domain CNQ55_RS00455 PF05043 Mga helix-turn-helix domain CNQ55_RS00455 PF00874 PRD domain CNQ55_RS00455 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CNQ55_RS00460 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CNQ55_RS00460 PF02378 Phosphotransferase system, EIIC CNQ55_RS00460 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CNQ55_RS00465 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CNQ55_RS00470 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CNQ55_RS00475 PF01116 Fructose-bisphosphate aldolase class-II CNQ55_RS00480 PF01116 Fructose-bisphosphate aldolase class-II CNQ55_RS00485 PF00480 ROK family CNQ55_RS00495 PF05170 AsmA family CNQ55_RS00500 PF00860 Permease family CNQ55_RS00505 PF03616 Sodium/glutamate symporter CNQ55_RS00510 PF00270 DEAD/DEAH box helicase CNQ55_RS00510 PF17191 RecG wedge domain CNQ55_RS00510 PF00271 Helicase conserved C-terminal domain CNQ55_RS00515 PF12105 SpoU, rRNA methylase, C-terminal CNQ55_RS00515 PF00588 SpoU rRNA Methylase family CNQ55_RS00520 PF02824 TGS domain CNQ55_RS00520 PF04607 Region found in RelA / SpoT proteins CNQ55_RS00520 PF13291 ACT domain CNQ55_RS00525 PF01192 RNA polymerase Rpb6 CNQ55_RS00530 PF00625 Guanylate kinase CNQ55_RS00535 PF03120 NAD-dependent DNA ligase OB-fold domain CNQ55_RS00535 PF01653 NAD-dependent DNA ligase adenylation domain CNQ55_RS00540 PF03458 UPF0126 domain CNQ55_RS00550 PF03755 YicC-like family, N-terminal region CNQ55_RS00550 PF08340 Domain of unknown function (DUF1732) CNQ55_RS00560 PF03725 3' exoribonuclease family, domain 2 CNQ55_RS00560 PF01138 3' exoribonuclease family, domain 1 CNQ55_RS00565 PF00156 Phosphoribosyl transferase domain CNQ55_RS00570 PF00440 Bacterial regulatory proteins, tetR family CNQ55_RS00575 PF00692 dUTPase CNQ55_RS00580 PF04127 DNA / pantothenate metabolism flavoprotein CNQ55_RS00580 PF02441 Flavoprotein CNQ55_RS00585 PF04002 RadC-like JAB domain CNQ55_RS00590 PF00830 Ribosomal L28 family CNQ55_RS00595 PF00471 Ribosomal protein L33 CNQ55_RS00600 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CNQ55_RS00600 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CNQ55_RS00600 PF06827 Zinc finger found in FPG and IleRS CNQ55_RS00605 PF01467 Cytidylyltransferase-like CNQ55_RS00610 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CNQ55_RS00615 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CNQ55_RS00620 PF00534 Glycosyl transferases group 1 CNQ55_RS00620 PF13439 Glycosyltransferase Family 4 CNQ55_RS00630 PF01501 Glycosyl transferase family 8 CNQ55_RS00630 PF08437 Glycosyl transferase family 8 C-terminal CNQ55_RS00635 PF08437 Glycosyl transferase family 8 C-terminal CNQ55_RS00635 PF01501 Glycosyl transferase family 8 CNQ55_RS00640 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) CNQ55_RS00645 PF08437 Glycosyl transferase family 8 C-terminal CNQ55_RS00645 PF01501 Glycosyl transferase family 8 CNQ55_RS00650 PF00535 Glycosyl transferase family 2 CNQ55_RS00655 PF04932 O-Antigen ligase CNQ55_RS00660 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CNQ55_RS00665 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CNQ55_RS00670 PF01370 NAD dependent epimerase/dehydratase family CNQ55_RS00675 PF00155 Aminotransferase class I and II CNQ55_RS00680 PF00107 Zinc-binding dehydrogenase CNQ55_RS00680 PF08240 Alcohol dehydrogenase GroES-like domain CNQ55_RS00685 PF00535 Glycosyl transferase family 2 CNQ55_RS00690 PF04748 Divergent polysaccharide deacetylase CNQ55_RS00695 PF01551 Peptidase family M23 CNQ55_RS00700 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CNQ55_RS00700 PF01676 Metalloenzyme superfamily CNQ55_RS00710 PF00581 Rhodanese-like domain CNQ55_RS00715 PF00462 Glutaredoxin CNQ55_RS00720 PF02556 Preprotein translocase subunit SecB CNQ55_RS00725 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CNQ55_RS00725 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CNQ55_RS00730 PF00132 Bacterial transferase hexapeptide (six repeats) CNQ55_RS00730 PF06426 Serine acetyltransferase, N-terminal CNQ55_RS00735 PF00588 SpoU rRNA Methylase family CNQ55_RS00740 PF01070 FMN-dependent dehydrogenase CNQ55_RS00745 PF07729 FCD domain CNQ55_RS00745 PF00392 Bacterial regulatory proteins, gntR family CNQ55_RS00750 PF02652 L-lactate permease CNQ55_RS00760 PF05658 Head domain of trimeric autotransporter adhesin CNQ55_RS00760 PF03895 YadA-like membrane anchor domain CNQ55_RS00760 PF13018 Extended Signal Peptide of Type V secretion system CNQ55_RS00760 PF05662 Coiled stalk of trimeric autotransporter adhesin CNQ55_RS00765 PF11622 Protein of unknown function (DUF3251) CNQ55_RS00770 PF10928 Protein of unknown function (DUF2810) CNQ55_RS00780 PF05068 Mannitol repressor CNQ55_RS00785 PF08125 Mannitol dehydrogenase C-terminal domain CNQ55_RS00785 PF01232 Mannitol dehydrogenase Rossmann domain CNQ55_RS00790 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CNQ55_RS00790 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CNQ55_RS00790 PF02378 Phosphotransferase system, EIIC CNQ55_RS00795 PF11742 Protein of unknown function (DUF3302) CNQ55_RS00800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CNQ55_RS00800 PF00529 HlyD membrane-fusion protein of T1SS CNQ55_RS00805 PF13417 Glutathione S-transferase, N-terminal domain CNQ55_RS00805 PF00043 Glutathione S-transferase, C-terminal domain CNQ55_RS00810 PF03841 L-seryl-tRNA selenium transferase CNQ55_RS00810 PF12390 Selenocysteine synthase N terminal CNQ55_RS00815 PF09107 Elongation factor SelB, winged helix CNQ55_RS00815 PF09106 Elongation factor SelB, winged helix CNQ55_RS00815 PF03144 Elongation factor Tu domain 2 CNQ55_RS00815 PF00009 Elongation factor Tu GTP binding domain CNQ55_RS00820 PF00465 Iron-containing alcohol dehydrogenase CNQ55_RS00825 PF00171 Aldehyde dehydrogenase family CNQ55_RS00830 PF00596 Class II Aldolase and Adducin N-terminal domain CNQ55_RS00835 PF01261 Xylose isomerase-like TIM barrel CNQ55_RS00840 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CNQ55_RS00850 PF03480 Bacterial extracellular solute-binding protein, family 7 CNQ55_RS00855 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CNQ55_RS00860 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CNQ55_RS00865 PF16154 Domain of unknown function (DUF4862) CNQ55_RS00870 PF04074 YhcH/YjgK/YiaL CNQ55_RS00875 PF02615 Malate/L-lactate dehydrogenase CNQ55_RS00880 PF01614 Bacterial transcriptional regulator CNQ55_RS00880 PF09339 IclR helix-turn-helix domain CNQ55_RS00885 PF13247 4Fe-4S dicluster domain CNQ55_RS00890 PF00155 Aminotransferase class I and II CNQ55_RS00895 PF00128 Alpha amylase, catalytic domain CNQ55_RS00900 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CNQ55_RS00905 PF12833 Helix-turn-helix domain CNQ55_RS00910 PF02653 Branched-chain amino acid transport system / permease component CNQ55_RS00915 PF00005 ABC transporter CNQ55_RS00920 PF13407 Periplasmic binding protein domain CNQ55_RS00930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CNQ55_RS00930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CNQ55_RS00935 PF05360 yiaA/B two helix domain CNQ55_RS00940 PF05360 yiaA/B two helix domain CNQ55_RS00945 PF01757 Acyltransferase family CNQ55_RS00950 PF13983 YsaB-like lipoprotein CNQ55_RS00955 PF02091 Glycyl-tRNA synthetase alpha subunit CNQ55_RS00960 PF05746 DALR anticodon binding domain CNQ55_RS00960 PF02092 Glycyl-tRNA synthetase beta subunit CNQ55_RS00965 PF01848 Hok/gef family CNQ55_RS00970 PF00313 'Cold-shock' DNA-binding domain CNQ55_RS00975 PF01381 Helix-turn-helix CNQ55_RS00980 PF11254 Protein of unknown function (DUF3053) CNQ55_RS00985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CNQ55_RS00985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CNQ55_RS00990 PF13488 Glycine zipper CNQ55_RS00990 PF00691 OmpA family CNQ55_RS00995 PF00384 Molybdopterin oxidoreductase CNQ55_RS00995 PF18364 Molybdopterin oxidoreductase N-terminal domain CNQ55_RS00995 PF01568 Molydopterin dinucleotide binding domain CNQ55_RS01000 PF00583 Acetyltransferase (GNAT) family CNQ55_RS01005 PF03352 Methyladenine glycosylase CNQ55_RS01010 PF03797 Autotransporter beta-domain CNQ55_RS01020 PF07690 Major Facilitator Superfamily CNQ55_RS01025 PF08019 Phosphoethanolamine transferase EptA/EptB CNQ55_RS01025 PF00884 Sulfatase CNQ55_RS01035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CNQ55_RS01045 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS01050 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS01050 PF12911 N-terminal TM domain of oligopeptide transport permease C CNQ55_RS01055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CNQ55_RS01055 PF00005 ABC transporter CNQ55_RS01060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CNQ55_RS01060 PF00005 ABC transporter CNQ55_RS01065 PF03222 Tryptophan/tyrosine permease family CNQ55_RS01080 PF13940 Toxin Ldr, type I toxin-antitoxin system CNQ55_RS01085 PF11658 Cellulose biosynthesis protein BcsG CNQ55_RS01090 PF11120 Cellulose biosynthesis protein BcsF CNQ55_RS01095 PF10995 Cellulose biosynthesis GIL CNQ55_RS01100 PF10945 Cellulose biosynthesis protein BcsR CNQ55_RS01105 PF06564 Cellulose biosynthesis protein BcsQ CNQ55_RS01110 PF03552 Cellulose synthase CNQ55_RS01110 PF00535 Glycosyl transferase family 2 CNQ55_RS01110 PF07238 PilZ domain CNQ55_RS01115 PF03170 Bacterial cellulose synthase subunit CNQ55_RS01120 PF01270 Glycosyl hydrolases family 8 CNQ55_RS01125 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CNQ55_RS01130 PF00563 EAL domain CNQ55_RS01130 PF00990 Diguanylate cyclase, GGDEF domain CNQ55_RS01130 PF17154 Gammaproteobacterial periplasmic sensor domain CNQ55_RS01130 PF00672 HAMP domain CNQ55_RS01140 PF00375 Sodium:dicarboxylate symporter family CNQ55_RS01150 PF05193 Peptidase M16 inactive domain CNQ55_RS01150 PF00675 Insulinase (Peptidase family M16) CNQ55_RS01155 PF00294 pfkB family carbohydrate kinase CNQ55_RS01165 PF00563 EAL domain CNQ55_RS01170 PF05170 AsmA family CNQ55_RS01175 PF00083 Sugar (and other) transporter CNQ55_RS01175 PF07690 Major Facilitator Superfamily CNQ55_RS01180 PF03631 Virulence factor BrkB CNQ55_RS01185 PF03466 LysR substrate binding domain CNQ55_RS01185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS01190 PF00196 Bacterial regulatory proteins, luxR family CNQ55_RS01195 PF01204 Trehalase CNQ55_RS01200 PF14376 Haem-binding domain CNQ55_RS01200 PF00034 Cytochrome c CNQ55_RS01200 PF03150 Di-haem cytochrome c peroxidase CNQ55_RS01205 PF00282 Pyridoxal-dependent decarboxylase conserved domain CNQ55_RS01210 PF12833 Helix-turn-helix domain CNQ55_RS01215 PF12833 Helix-turn-helix domain CNQ55_RS01225 PF00873 AcrB/AcrD/AcrF family CNQ55_RS01230 PF00529 HlyD membrane-fusion protein of T1SS CNQ55_RS01230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CNQ55_RS01240 PF00196 Bacterial regulatory proteins, luxR family CNQ55_RS01245 PF03729 Short repeat of unknown function (DUF308) CNQ55_RS01250 PF06411 HdeA/HdeB family CNQ55_RS01255 PF06411 HdeA/HdeB family CNQ55_RS01260 PF02308 MgtC family CNQ55_RS01265 PF00005 ABC transporter CNQ55_RS01270 PF01032 FecCD transport family CNQ55_RS01280 PF06228 Haem utilisation ChuX/HutX CNQ55_RS01285 PF04055 Radical SAM superfamily CNQ55_RS01305 PF00593 TonB dependent receptor CNQ55_RS01305 PF07715 TonB-dependent Receptor Plug Domain CNQ55_RS01310 PF05171 Haemin-degrading HemS.ChuX domain CNQ55_RS01315 PF00196 Bacterial regulatory proteins, luxR family CNQ55_RS01325 PF03843 Outer membrane lipoprotein Slp family CNQ55_RS01335 PF03960 ArsC family CNQ55_RS01355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CNQ55_RS01355 PF07992 Pyridine nucleotide-disulphide oxidoreductase CNQ55_RS01360 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CNQ55_RS01365 PF01432 Peptidase family M3 CNQ55_RS01370 PF04445 Putative SAM-dependent methyltransferase CNQ55_RS01375 PF00854 POT family CNQ55_RS01385 PF00582 Universal stress protein family CNQ55_RS01390 PF10625 Universal stress protein B (UspB) CNQ55_RS01395 PF01384 Phosphate transporter family CNQ55_RS01405 PF10951 Protein of unknown function (DUF2776) CNQ55_RS01415 PF13533 Biotin-lipoyl like CNQ55_RS01420 PF00005 ABC transporter CNQ55_RS01430 PF01402 Ribbon-helix-helix protein, copG family CNQ55_RS01430 PF08753 NikR C terminal nickel binding domain CNQ55_RS01435 PF00005 ABC transporter CNQ55_RS01440 PF00005 ABC transporter CNQ55_RS01445 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS01450 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS01455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CNQ55_RS01460 PF01648 4'-phosphopantetheinyl transferase superfamily CNQ55_RS01465 PF01594 AI-2E family transporter CNQ55_RS01470 PF07690 Major Facilitator Superfamily CNQ55_RS01475 PF08786 DcrB CNQ55_RS01480 PF02592 Putative vitamin uptake transporter CNQ55_RS01485 PF01206 Sulfurtransferase TusA CNQ55_RS01490 PF00403 Heavy-metal-associated domain CNQ55_RS01495 PF07947 YhhN family CNQ55_RS01500 PF10694 Protein of unknown function (DUF2500) CNQ55_RS01505 PF06611 Protein of unknown function (DUF1145) CNQ55_RS01515 PF02881 SRP54-type protein, helical bundle domain CNQ55_RS01515 PF00448 SRP54-type protein, GTPase domain CNQ55_RS01520 PF00005 ABC transporter CNQ55_RS01525 PF02687 FtsX-like permease family CNQ55_RS01525 PF18075 FtsX extracellular domain CNQ55_RS01530 PF04542 Sigma-70 region 2 CNQ55_RS01530 PF04545 Sigma-70, region 4 CNQ55_RS01535 PF13458 Periplasmic binding protein CNQ55_RS01540 PF12568 Acetyltransferase (GNAT) domain, PanZ CNQ55_RS01550 PF13458 Periplasmic binding protein CNQ55_RS01555 PF02653 Branched-chain amino acid transport system / permease component CNQ55_RS01560 PF11862 Domain of unknown function (DUF3382) CNQ55_RS01560 PF02653 Branched-chain amino acid transport system / permease component CNQ55_RS01565 PF00005 ABC transporter CNQ55_RS01565 PF12399 Branched-chain amino acid ATP-binding cassette transporter CNQ55_RS01570 PF00005 ABC transporter CNQ55_RS01575 PF13416 Bacterial extracellular solute-binding protein CNQ55_RS01580 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS01585 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS01590 PF17912 MalK OB fold domain CNQ55_RS01590 PF00005 ABC transporter CNQ55_RS01595 PF03009 Glycerophosphoryl diester phosphodiesterase family CNQ55_RS01600 PF10956 Protein of unknown function (DUF2756) CNQ55_RS01610 PF15567 Immunity protein 35 CNQ55_RS01625 PF05638 Type VI secretion system effector, Hcp CNQ55_RS01630 PF00583 Acetyltransferase (GNAT) family CNQ55_RS01640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CNQ55_RS01640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CNQ55_RS01645 PF17954 Quercetinase C-terminal cupin domain CNQ55_RS01645 PF02678 Pirin CNQ55_RS01650 PF00356 Bacterial regulatory proteins, lacI family CNQ55_RS01650 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CNQ55_RS01655 PF01202 Shikimate kinase CNQ55_RS01660 PF02447 GntP family permease CNQ55_RS01665 PF00271 Helicase conserved C-terminal domain CNQ55_RS01665 PF00570 HRDC domain CNQ55_RS01665 PF00270 DEAD/DEAH box helicase CNQ55_RS01665 PF09382 RQC domain CNQ55_RS01665 PF16124 RecQ zinc-binding CNQ55_RS01675 PF01914 MarC family integral membrane protein CNQ55_RS01680 PF01118 Semialdehyde dehydrogenase, NAD binding domain CNQ55_RS01680 PF02774 Semialdehyde dehydrogenase, dimerisation domain CNQ55_RS01685 PF00128 Alpha amylase, catalytic domain CNQ55_RS01685 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CNQ55_RS01685 PF02806 Alpha amylase, C-terminal all-beta domain CNQ55_RS01690 PF18390 Glycogen debranching enzyme C-terminal domain CNQ55_RS01690 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CNQ55_RS01690 PF00128 Alpha amylase, catalytic domain CNQ55_RS01695 PF00483 Nucleotidyl transferase CNQ55_RS01700 PF08323 Starch synthase catalytic domain CNQ55_RS01700 PF00534 Glycosyl transferases group 1 CNQ55_RS01705 PF00343 Carbohydrate phosphorylase CNQ55_RS01715 PF02753 Pili assembly chaperone PapD, C-terminal domain CNQ55_RS01715 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CNQ55_RS01720 PF13954 PapC N-terminal domain CNQ55_RS01720 PF00577 Outer membrane usher protein CNQ55_RS01720 PF13953 PapC C-terminal domain CNQ55_RS01725 PF00419 Fimbrial protein CNQ55_RS01730 PF00419 Fimbrial protein CNQ55_RS01735 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CNQ55_RS01735 PF02753 Pili assembly chaperone PapD, C-terminal domain CNQ55_RS01740 PF00419 Fimbrial protein CNQ55_RS01760 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CNQ55_RS01760 PF01266 FAD dependent oxidoreductase CNQ55_RS01765 PF00581 Rhodanese-like domain CNQ55_RS01770 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CNQ55_RS01770 PF01694 Rhomboid family CNQ55_RS01775 PF08220 DeoR-like helix-turn-helix domain CNQ55_RS01775 PF00455 DeoR C terminal sensor domain CNQ55_RS01780 PF00158 Sigma-54 interaction domain CNQ55_RS01780 PF06956 Regulator of RNA terminal phosphate cyclase CNQ55_RS01785 PF01139 tRNA-splicing ligase RtcB CNQ55_RS01795 PF17874 MalT-like TPR region CNQ55_RS01795 PF00196 Bacterial regulatory proteins, luxR family CNQ55_RS01800 PF00343 Carbohydrate phosphorylase CNQ55_RS01805 PF02446 4-alpha-glucanotransferase CNQ55_RS01810 PF02447 GntP family permease CNQ55_RS01815 PF01106 NifU-like domain CNQ55_RS01815 PF01521 Iron-sulphur cluster biosynthesis CNQ55_RS01820 PF00156 Phosphoribosyl transferase domain CNQ55_RS01825 PF00561 alpha/beta hydrolase fold CNQ55_RS01830 PF04754 Putative transposase, YhgA-like CNQ55_RS01840 PF09012 FeoC like transcriptional regulator CNQ55_RS01845 PF07664 Ferrous iron transport protein B C terminus CNQ55_RS01845 PF02421 Ferrous iron transport protein B CNQ55_RS01845 PF07670 Nucleoside recognition CNQ55_RS01845 PF17910 FeoB cytosolic helical domain CNQ55_RS01850 PF04023 FeoA domain CNQ55_RS01860 PF09371 Tex-like protein N-terminal domain CNQ55_RS01860 PF17674 HHH domain CNQ55_RS01860 PF00575 S1 RNA binding domain CNQ55_RS01860 PF16921 Tex protein YqgF-like domain CNQ55_RS01865 PF03449 Transcription elongation factor, N-terminal CNQ55_RS01865 PF01272 Transcription elongation factor, GreA/GreB, C-term CNQ55_RS01875 PF00072 Response regulator receiver domain CNQ55_RS01875 PF00486 Transcriptional regulatory protein, C terminal CNQ55_RS01880 PF00672 HAMP domain CNQ55_RS01880 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS01880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS01885 PF01293 Phosphoenolpyruvate carboxykinase CNQ55_RS01895 PF13687 Domain of unknown function (DUF4153) CNQ55_RS01900 PF01430 Hsp33 protein CNQ55_RS01905 PF01479 S4 domain CNQ55_RS01910 PF13419 Haloacid dehalogenase-like hydrolase CNQ55_RS01915 PF07095 Intracellular growth attenuator protein IgaA CNQ55_RS01920 PF00293 NUDIX domain CNQ55_RS01925 PF17092 Penicillin-binding protein OB-like domain CNQ55_RS01925 PF00912 Transglycosylase CNQ55_RS01925 PF00905 Penicillin binding protein transpeptidase domain CNQ55_RS01935 PF05137 Fimbrial assembly protein (PilN) CNQ55_RS01945 PF10748 DNA utilization proteins HofP CNQ55_RS01950 PF00263 Bacterial type II and III secretion system protein CNQ55_RS01950 PF03958 Bacterial type II/III secretion system short domain CNQ55_RS01955 PF01202 Shikimate kinase CNQ55_RS01960 PF01761 3-dehydroquinate synthase CNQ55_RS01965 PF05036 Sporulation related domain CNQ55_RS01970 PF02086 D12 class N6 adenine-specific DNA methyltransferase CNQ55_RS01975 PF00834 Ribulose-phosphate 3 epimerase family CNQ55_RS01980 PF13419 Haloacid dehalogenase-like hydrolase CNQ55_RS01985 PF00579 tRNA synthetases class I (W and Y) CNQ55_RS01990 PF14503 YhfZ C-terminal domain CNQ55_RS01990 PF14502 Helix-turn-helix domain CNQ55_RS02000 PF01168 Alanine racemase, N-terminal domain CNQ55_RS02005 PF01676 Metalloenzyme superfamily CNQ55_RS02010 PF02126 Phosphotriesterase family CNQ55_RS02015 PF10941 Protein of unknown function DUF2620 CNQ55_RS02020 PF10797 Protein of unknown function CNQ55_RS02025 PF00155 Aminotransferase class I and II CNQ55_RS02030 PF13978 Protein of unknown function (DUF4223) CNQ55_RS02035 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CNQ55_RS02035 PF14824 Sirohaem biosynthesis protein central CNQ55_RS02035 PF10414 Sirohaem synthase dimerisation region CNQ55_RS02040 PF01226 Formate/nitrite transporter CNQ55_RS02045 PF13806 Rieske-like [2Fe-2S] domain CNQ55_RS02050 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CNQ55_RS02050 PF04324 BFD-like [2Fe-2S] binding domain CNQ55_RS02050 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CNQ55_RS02050 PF07992 Pyridine nucleotide-disulphide oxidoreductase CNQ55_RS02050 PF18267 Rubredoxin NAD+ reductase C-terminal domain CNQ55_RS02055 PF07690 Major Facilitator Superfamily CNQ55_RS02060 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CNQ55_RS02065 PF10832 Protein of unknown function (DUF2559) CNQ55_RS02070 PF02661 Fic/DOC family CNQ55_RS02075 PF00117 Glutamine amidotransferase class-I CNQ55_RS02080 PF00202 Aminotransferase class-III CNQ55_RS02085 PF12805 FUSC-like inner membrane protein yccS CNQ55_RS02090 PF00027 Cyclic nucleotide-binding domain CNQ55_RS02090 PF13545 Crp-like helix-turn-helix domain CNQ55_RS02100 PF02566 OsmC-like protein CNQ55_RS02105 PF00485 Phosphoribulokinase / Uridine kinase family CNQ55_RS02110 PF06794 Uncharacterised protein family (UPF0270) CNQ55_RS02115 PF00561 alpha/beta hydrolase fold CNQ55_RS02120 PF12848 ABC transporter CNQ55_RS02120 PF00005 ABC transporter CNQ55_RS02130 PF02525 Flavodoxin-like fold CNQ55_RS02135 PF00999 Sodium/hydrogen exchanger family CNQ55_RS02135 PF02254 TrkA-N domain CNQ55_RS02140 PF09526 Probable metal-binding protein (DUF2387) CNQ55_RS02145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CNQ55_RS02150 PF04102 SlyX CNQ55_RS02155 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CNQ55_RS02155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CNQ55_RS02160 PF13309 HTH domain CNQ55_RS02160 PF08348 YheO-like PAS domain CNQ55_RS02165 PF02635 DsrE/DsrF-like family CNQ55_RS02170 PF02635 DsrE/DsrF-like family CNQ55_RS02175 PF04077 DsrH like protein CNQ55_RS02180 PF00164 Ribosomal protein S12/S23 CNQ55_RS02185 PF00177 Ribosomal protein S7p/S5e CNQ55_RS02190 PF03144 Elongation factor Tu domain 2 CNQ55_RS02190 PF00679 Elongation factor G C-terminus CNQ55_RS02190 PF00009 Elongation factor Tu GTP binding domain CNQ55_RS02190 PF14492 Elongation Factor G, domain II CNQ55_RS02190 PF03764 Elongation factor G, domain IV CNQ55_RS02195 PF03143 Elongation factor Tu C-terminal domain CNQ55_RS02195 PF00009 Elongation factor Tu GTP binding domain CNQ55_RS02195 PF03144 Elongation factor Tu domain 2 CNQ55_RS02205 PF02839 Carbohydrate binding domain CNQ55_RS02210 PF04324 BFD-like [2Fe-2S] binding domain CNQ55_RS02215 PF00210 Ferritin-like domain CNQ55_RS02220 PF01478 Type IV leader peptidase family CNQ55_RS02225 PF04612 Type II secretion system (T2SS), protein M CNQ55_RS02230 PF12693 GspL periplasmic domain CNQ55_RS02230 PF05134 Type II secretion system (T2SS), protein L CNQ55_RS02235 PF03934 Type II secretion system (T2SS), protein K CNQ55_RS02240 PF11612 Type II secretion system (T2SS), protein J CNQ55_RS02240 PF07963 Prokaryotic N-terminal methylation motif CNQ55_RS02245 PF02501 Type II secretion system (T2SS), protein I CNQ55_RS02245 PF07963 Prokaryotic N-terminal methylation motif CNQ55_RS02250 PF12019 Type II transport protein GspH CNQ55_RS02250 PF07963 Prokaryotic N-terminal methylation motif CNQ55_RS02255 PF07963 Prokaryotic N-terminal methylation motif CNQ55_RS02255 PF08334 Type II secretion system (T2SS), protein G CNQ55_RS02260 PF00482 Type II secretion system (T2SS), protein F CNQ55_RS02265 PF00437 Type II/IV secretion system protein CNQ55_RS02270 PF03958 Bacterial type II/III secretion system short domain CNQ55_RS02270 PF00263 Bacterial type II and III secretion system protein CNQ55_RS02275 PF11356 Type II secretion system protein C CNQ55_RS02280 PF13401 AAA domain CNQ55_RS02280 PF01471 Putative peptidoglycan binding domain CNQ55_RS02285 PF13401 AAA domain CNQ55_RS02285 PF01471 Putative peptidoglycan binding domain CNQ55_RS02300 PF00338 Ribosomal protein S10p/S20e CNQ55_RS02305 PF00297 Ribosomal protein L3 CNQ55_RS02310 PF00573 Ribosomal protein L4/L1 family CNQ55_RS02315 PF00276 Ribosomal protein L23 CNQ55_RS02320 PF00181 Ribosomal Proteins L2, RNA binding domain CNQ55_RS02320 PF03947 Ribosomal Proteins L2, C-terminal domain CNQ55_RS02325 PF00203 Ribosomal protein S19 CNQ55_RS02330 PF00237 Ribosomal protein L22p/L17e CNQ55_RS02335 PF07650 KH domain CNQ55_RS02335 PF00189 Ribosomal protein S3, C-terminal domain CNQ55_RS02340 PF00252 Ribosomal protein L16p/L10e CNQ55_RS02345 PF00831 Ribosomal L29 protein CNQ55_RS02350 PF00366 Ribosomal protein S17 CNQ55_RS02355 PF00238 Ribosomal protein L14p/L23e CNQ55_RS02360 PF00467 KOW motif CNQ55_RS02360 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CNQ55_RS02365 PF00281 Ribosomal protein L5 CNQ55_RS02365 PF00673 ribosomal L5P family C-terminus CNQ55_RS02370 PF00253 Ribosomal protein S14p/S29e CNQ55_RS02375 PF00410 Ribosomal protein S8 CNQ55_RS02380 PF00347 Ribosomal protein L6 CNQ55_RS02385 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CNQ55_RS02390 PF00333 Ribosomal protein S5, N-terminal domain CNQ55_RS02390 PF03719 Ribosomal protein S5, C-terminal domain CNQ55_RS02395 PF00327 Ribosomal protein L30p/L7e CNQ55_RS02400 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CNQ55_RS02405 PF00344 SecY translocase CNQ55_RS02410 PF00444 Ribosomal protein L36 CNQ55_RS02415 PF00416 Ribosomal protein S13/S18 CNQ55_RS02420 PF00411 Ribosomal protein S11 CNQ55_RS02425 PF00163 Ribosomal protein S4/S9 N-terminal domain CNQ55_RS02425 PF01479 S4 domain CNQ55_RS02430 PF01000 RNA polymerase Rpb3/RpoA insert domain CNQ55_RS02430 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CNQ55_RS02430 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CNQ55_RS02435 PF01196 Ribosomal protein L17 CNQ55_RS02440 PF09350 Domain of unknown function (DUF1992) CNQ55_RS02445 PF13411 MerR HTH family regulatory protein CNQ55_RS02450 PF03889 Alternative ribosome-rescue factor A CNQ55_RS02455 PF01741 Large-conductance mechanosensitive channel, MscL CNQ55_RS02460 PF02080 TrkA-C domain CNQ55_RS02460 PF02254 TrkA-N domain CNQ55_RS02465 PF01189 16S rRNA methyltransferase RsmB/F CNQ55_RS02465 PF01029 NusB family CNQ55_RS02470 PF00551 Formyl transferase CNQ55_RS02470 PF02911 Formyl transferase, C-terminal domain CNQ55_RS02475 PF01327 Polypeptide deformylase CNQ55_RS02480 PF17782 DprA winged helix domain CNQ55_RS02480 PF02481 DNA recombination-mediator protein A CNQ55_RS02485 PF04361 Protein of unknown function (DUF494) CNQ55_RS02490 PF01396 Topoisomerase DNA binding C4 zinc finger CNQ55_RS02495 PF01300 Telomere recombination CNQ55_RS02500 PF01488 Shikimate / quinate 5-dehydrogenase CNQ55_RS02500 PF08501 Shikimate dehydrogenase substrate binding domain CNQ55_RS02500 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CNQ55_RS02505 PF07369 Protein of unknown function (DUF1488) CNQ55_RS02510 PF00132 Bacterial transferase hexapeptide (six repeats) CNQ55_RS02540 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CNQ55_RS02545 PF12804 MobA-like NTP transferase domain CNQ55_RS02550 PF06288 Protein of unknown function (DUF1040) CNQ55_RS02555 PF01636 Phosphotransferase enzyme family CNQ55_RS02560 PF01323 DSBA-like thioredoxin domain CNQ55_RS02565 PF06097 Bacterial protein of unknown function (DUF945) CNQ55_RS02570 PF01553 Acyltransferase CNQ55_RS02580 PF01367 5'-3' exonuclease, C-terminal SAM fold CNQ55_RS02580 PF01612 3'-5' exonuclease CNQ55_RS02580 PF00476 DNA polymerase family A CNQ55_RS02580 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CNQ55_RS02585 PF01926 50S ribosome-binding GTPase CNQ55_RS02595 PF04220 Der GTPase activator (YihI) CNQ55_RS02600 PF04055 Radical SAM superfamily CNQ55_RS02600 PF06969 HemN C-terminal domain CNQ55_RS02610 PF02954 Bacterial regulatory protein, Fis family CNQ55_RS02610 PF00072 Response regulator receiver domain CNQ55_RS02610 PF00158 Sigma-54 interaction domain CNQ55_RS02615 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS02615 PF00989 PAS fold CNQ55_RS02615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS02620 PF03951 Glutamine synthetase, beta-Grasp domain CNQ55_RS02620 PF00120 Glutamine synthetase, catalytic domain CNQ55_RS02630 PF03144 Elongation factor Tu domain 2 CNQ55_RS02630 PF00009 Elongation factor Tu GTP binding domain CNQ55_RS02630 PF00679 Elongation factor G C-terminus CNQ55_RS02635 PF00392 Bacterial regulatory proteins, gntR family CNQ55_RS02635 PF07702 UTRA domain CNQ55_RS02640 PF01261 Xylose isomerase-like TIM barrel CNQ55_RS02645 PF07690 Major Facilitator Superfamily CNQ55_RS02650 PF08220 DeoR-like helix-turn-helix domain CNQ55_RS02650 PF00455 DeoR C terminal sensor domain CNQ55_RS02655 PF00294 pfkB family carbohydrate kinase CNQ55_RS02660 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CNQ55_RS02660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CNQ55_RS02665 PF01791 DeoC/LacD family aldolase CNQ55_RS02670 PF08240 Alcohol dehydrogenase GroES-like domain CNQ55_RS02670 PF00107 Zinc-binding dehydrogenase CNQ55_RS02690 PF13419 Haloacid dehalogenase-like hydrolase CNQ55_RS02695 PF03631 Virulence factor BrkB CNQ55_RS02700 PF02580 D-Tyr-tRNA(Tyr) deacylase CNQ55_RS02705 PF09500 Putative thioesterase (yiiD_Cterm) CNQ55_RS02705 PF00583 Acetyltransferase (GNAT) family CNQ55_RS02710 PF07859 alpha/beta hydrolase fold CNQ55_RS02715 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system CNQ55_RS02730 PF01402 Ribbon-helix-helix protein, copG family CNQ55_RS02735 PF04216 Protein involved in formate dehydrogenase formation CNQ55_RS02740 PF01292 Prokaryotic cytochrome b561 CNQ55_RS02745 PF09163 Formate dehydrogenase N, transmembrane CNQ55_RS02745 PF13247 4Fe-4S dicluster domain CNQ55_RS02760 PF02634 FdhD/NarQ family CNQ55_RS02775 PF05336 L-rhamnose mutarotase CNQ55_RS02780 PF00596 Class II Aldolase and Adducin N-terminal domain CNQ55_RS02785 PF06134 L-rhamnose isomerase (RhaA) CNQ55_RS02790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CNQ55_RS02790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CNQ55_RS02795 PF12833 Helix-turn-helix domain CNQ55_RS02795 PF02311 AraC-like ligand binding domain CNQ55_RS02800 PF12833 Helix-turn-helix domain CNQ55_RS02800 PF02311 AraC-like ligand binding domain CNQ55_RS02805 PF06379 L-rhamnose-proton symport protein (RhaT) CNQ55_RS02810 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CNQ55_RS02810 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CNQ55_RS02820 PF03812 2-keto-3-deoxygluconate permease CNQ55_RS02825 PF03475 3-alpha domain CNQ55_RS02825 PF03473 MOSC domain CNQ55_RS02830 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS02830 PF16527 Two-component sensor protein CpxA, periplasmic domain CNQ55_RS02830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS02830 PF00672 HAMP domain CNQ55_RS02835 PF00486 Transcriptional regulatory protein, C terminal CNQ55_RS02835 PF00072 Response regulator receiver domain CNQ55_RS02840 PF07813 LTXXQ motif family protein CNQ55_RS02845 PF16916 Dimerisation domain of Zinc Transporter CNQ55_RS02845 PF01545 Cation efflux family CNQ55_RS02850 PF00365 Phosphofructokinase CNQ55_RS02860 PF02611 CDP-diacylglycerol pyrophosphatase CNQ55_RS02865 PF00121 Triosephosphate isomerase CNQ55_RS02875 PF07305 Protein of unknown function (DUF1454) CNQ55_RS02880 PF05656 Protein of unknown function (DUF805) CNQ55_RS02885 PF04175 Protein of unknown function (DUF406) CNQ55_RS02890 PF00582 Universal stress protein family CNQ55_RS02895 PF00175 Oxidoreductase NAD-binding domain CNQ55_RS02895 PF00970 Oxidoreductase FAD-binding domain CNQ55_RS02900 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CNQ55_RS02905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CNQ55_RS02905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CNQ55_RS02910 PF00230 Major intrinsic protein CNQ55_RS02915 PF06005 Cell division protein ZapB CNQ55_RS02920 PF03737 Aldolase/RraA CNQ55_RS02925 PF01040 UbiA prenyltransferase family CNQ55_RS02930 PF10431 C-terminal, D2-small domain, of ClpB protein CNQ55_RS02930 PF07724 AAA domain (Cdc48 subfamily) CNQ55_RS02930 PF00004 ATPase family associated with various cellular activities (AAA) CNQ55_RS02935 PF00227 Proteasome subunit CNQ55_RS02940 PF05036 Sporulation related domain CNQ55_RS02945 PF00356 Bacterial regulatory proteins, lacI family CNQ55_RS02950 PF00270 DEAD/DEAH box helicase CNQ55_RS02950 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CNQ55_RS02950 PF00271 Helicase conserved C-terminal domain CNQ55_RS02950 PF18074 Primosomal protein N C-terminal domain CNQ55_RS02950 PF17764 3′ DNA-binding domain (3′BD) CNQ55_RS02955 PF01197 Ribosomal protein L31 CNQ55_RS02960 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CNQ55_RS02965 PF01340 Met Apo-repressor, MetJ CNQ55_RS02970 PF01053 Cys/Met metabolism PLP-dependent enzyme CNQ55_RS02975 PF00696 Amino acid kinase family CNQ55_RS02975 PF00742 Homoserine dehydrogenase CNQ55_RS02975 PF03447 Homoserine dehydrogenase, NAD binding domain CNQ55_RS02980 PF03502 Nucleoside-specific channel-forming protein, Tsx CNQ55_RS02985 PF02872 5'-nucleotidase, C-terminal domain CNQ55_RS02985 PF00149 Calcineurin-like phosphoesterase CNQ55_RS02990 PF02872 5'-nucleotidase, C-terminal domain CNQ55_RS02990 PF00149 Calcineurin-like phosphoesterase CNQ55_RS03000 PF02872 5'-nucleotidase, C-terminal domain CNQ55_RS03000 PF00149 Calcineurin-like phosphoesterase CNQ55_RS03005 PF02219 Methylenetetrahydrofolate reductase CNQ55_RS03010 PF00141 Peroxidase CNQ55_RS03015 PF00892 EamA-like transporter family CNQ55_RS03020 PF06940 Domain of unknown function (DUF1287) CNQ55_RS03025 PF00465 Iron-containing alcohol dehydrogenase CNQ55_RS03030 PF00923 Transaldolase/Fructose-6-phosphate aldolase CNQ55_RS03035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CNQ55_RS03035 PF05524 PEP-utilising enzyme, N-terminal CNQ55_RS03035 PF00391 PEP-utilising enzyme, mobile domain CNQ55_RS03035 PF02896 PEP-utilising enzyme, TIM barrel domain CNQ55_RS03035 PF00381 PTS HPr component phosphorylation site CNQ55_RS03045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CNQ55_RS03050 PF01228 Glycine radical CNQ55_RS03050 PF02901 Pyruvate formate lyase-like CNQ55_RS03055 PF04055 Radical SAM superfamily CNQ55_RS03060 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CNQ55_RS03065 PF12833 Helix-turn-helix domain CNQ55_RS03070 PF00884 Sulfatase CNQ55_RS03075 PF00311 Phosphoenolpyruvate carboxylase CNQ55_RS03080 PF01546 Peptidase family M20/M25/M40 CNQ55_RS03080 PF07687 Peptidase dimerisation domain CNQ55_RS03085 PF01118 Semialdehyde dehydrogenase, NAD binding domain CNQ55_RS03085 PF02774 Semialdehyde dehydrogenase, dimerisation domain CNQ55_RS03090 PF00696 Amino acid kinase family CNQ55_RS03095 PF14698 Argininosuccinate lyase C-terminal CNQ55_RS03095 PF00206 Lyase CNQ55_RS03100 PF13378 Enolase C-terminal domain-like CNQ55_RS03100 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CNQ55_RS03105 PF07690 Major Facilitator Superfamily CNQ55_RS03115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS03115 PF03466 LysR substrate binding domain CNQ55_RS03120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CNQ55_RS03120 PF07992 Pyridine nucleotide-disulphide oxidoreductase CNQ55_RS03125 PF07687 Peptidase dimerisation domain CNQ55_RS03125 PF01546 Peptidase family M20/M25/M40 CNQ55_RS03130 PF07690 Major Facilitator Superfamily CNQ55_RS03135 PF00440 Bacterial regulatory proteins, tetR family CNQ55_RS03140 PF07226 Protein of unknown function (DUF1422) CNQ55_RS03145 PF05958 tRNA (Uracil-5-)-methyltransferase CNQ55_RS03150 PF07715 TonB-dependent Receptor Plug Domain CNQ55_RS03150 PF00593 TonB dependent receptor CNQ55_RS03155 PF01177 Asp/Glu/Hydantoin racemase CNQ55_RS03190 PF00005 ABC transporter CNQ55_RS03195 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS03200 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS03205 PF00497 Bacterial extracellular solute-binding proteins, family 3 CNQ55_RS03225 PF00873 AcrB/AcrD/AcrF family CNQ55_RS03230 PF00529 HlyD membrane-fusion protein of T1SS CNQ55_RS03230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CNQ55_RS03240 PF08361 MAATS-type transcriptional repressor, C-terminal region CNQ55_RS03240 PF00440 Bacterial regulatory proteins, tetR family CNQ55_RS03245 PF10831 Protein of unknown function (DUF2556) CNQ55_RS03250 PF01555 DNA methylase CNQ55_RS03255 PF02954 Bacterial regulatory protein, Fis family CNQ55_RS03260 PF01207 Dihydrouridine synthase (Dus) CNQ55_RS03270 PF00474 Sodium:solute symporter family CNQ55_RS03275 PF06196 Protein of unknown function (DUF997) CNQ55_RS03280 PF00294 pfkB family carbohydrate kinase CNQ55_RS03285 PF08220 DeoR-like helix-turn-helix domain CNQ55_RS03285 PF00455 DeoR C terminal sensor domain CNQ55_RS03290 PF01116 Fructose-bisphosphate aldolase class-II CNQ55_RS03295 PF13407 Periplasmic binding protein domain CNQ55_RS03300 PF00005 ABC transporter CNQ55_RS03305 PF02653 Branched-chain amino acid transport system / permease component CNQ55_RS03310 PF00294 pfkB family carbohydrate kinase CNQ55_RS03320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CNQ55_RS03320 PF00289 Biotin carboxylase, N-terminal domain CNQ55_RS03320 PF02785 Biotin carboxylase C-terminal domain CNQ55_RS03325 PF00364 Biotin-requiring enzyme CNQ55_RS03340 PF00107 Zinc-binding dehydrogenase CNQ55_RS03340 PF08240 Alcohol dehydrogenase GroES-like domain CNQ55_RS03345 PF00563 EAL domain CNQ55_RS03345 PF17157 Gammaproteobacterial periplasmic sensor domain CNQ55_RS03345 PF00990 Diguanylate cyclase, GGDEF domain CNQ55_RS03365 PF04085 rod shape-determining protein MreC CNQ55_RS03370 PF04093 rod shape-determining protein MreD CNQ55_RS03375 PF02545 Maf-like protein CNQ55_RS03380 PF00575 S1 RNA binding domain CNQ55_RS03380 PF10150 Ribonuclease E/G family CNQ55_RS03385 PF13502 AsmA-like C-terminal region CNQ55_RS03385 PF13116 Protein of unknown function CNQ55_RS03390 PF01523 Putative modulator of DNA gyrase CNQ55_RS03395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS03395 PF03466 LysR substrate binding domain CNQ55_RS03400 PF07869 Protein of unknown function (DUF1656) CNQ55_RS03405 PF13533 Biotin-lipoyl like CNQ55_RS03410 PF04632 Fusaric acid resistance protein family CNQ55_RS03415 PF01337 Barstar (barnase inhibitor) CNQ55_RS03420 PF07338 Protein of unknown function (DUF1471) CNQ55_RS03425 PF02863 Arginine repressor, C-terminal domain CNQ55_RS03425 PF01316 Arginine repressor, DNA binding domain CNQ55_RS03430 PF00056 lactate/malate dehydrogenase, NAD binding domain CNQ55_RS03430 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CNQ55_RS03435 PF13180 PDZ domain CNQ55_RS03440 PF00595 PDZ domain CNQ55_RS03440 PF13180 PDZ domain CNQ55_RS03445 PF06295 Protein of unknown function (DUF1043) CNQ55_RS03450 PF03969 AFG1-like ATPase CNQ55_RS03460 PF00572 Ribosomal protein L13 CNQ55_RS03465 PF00380 Ribosomal protein S9/S16 CNQ55_RS03475 PF02798 Glutathione S-transferase, N-terminal domain CNQ55_RS03475 PF00043 Glutathione S-transferase, C-terminal domain CNQ55_RS03480 PF04386 Stringent starvation protein B CNQ55_RS03485 PF07729 FCD domain CNQ55_RS03485 PF00392 Bacterial regulatory proteins, gntR family CNQ55_RS03490 PF00701 Dihydrodipicolinate synthetase family CNQ55_RS03495 PF07690 Major Facilitator Superfamily CNQ55_RS03500 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CNQ55_RS03505 PF00480 ROK family CNQ55_RS03510 PF04074 YhcH/YjgK/YiaL CNQ55_RS03515 PF06250 YhcG PDDEXK nuclease domain CNQ55_RS03515 PF17761 DUF1016 N-terminal domain CNQ55_RS03520 PF07992 Pyridine nucleotide-disulphide oxidoreductase CNQ55_RS03520 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CNQ55_RS03525 PF00310 Glutamine amidotransferases class-II CNQ55_RS03525 PF04898 Glutamate synthase central domain CNQ55_RS03525 PF01493 GXGXG motif CNQ55_RS03525 PF01645 Conserved region in glutamate synthase CNQ55_RS03540 PF04055 Radical SAM superfamily CNQ55_RS03540 PF16199 Radical_SAM C-terminal domain CNQ55_RS03545 PF00989 PAS fold CNQ55_RS03545 PF00072 Response regulator receiver domain CNQ55_RS03545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS03545 PF01627 Hpt domain CNQ55_RS03545 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS03545 PF18415 Histidine kinase receptor ArcB trans-membrane domain CNQ55_RS03555 PF00912 Transglycosylase CNQ55_RS03560 PF10707 PhoP regulatory network protein YrbL CNQ55_RS03565 PF00381 PTS HPr component phosphorylation site CNQ55_RS03570 PF03668 P-loop ATPase protein family CNQ55_RS03575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CNQ55_RS03580 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CNQ55_RS03585 PF00309 Sigma-54 factor, Activator interacting domain (AID) CNQ55_RS03585 PF04963 Sigma-54 factor, core binding domain CNQ55_RS03585 PF04552 Sigma-54, DNA binding domain CNQ55_RS03590 PF00005 ABC transporter CNQ55_RS03590 PF12399 Branched-chain amino acid ATP-binding cassette transporter CNQ55_RS03595 PF03968 OstA-like protein CNQ55_RS03600 PF06835 Lipopolysaccharide-assembly, LptC-related CNQ55_RS03610 PF01380 SIS domain CNQ55_RS03610 PF00571 CBS domain CNQ55_RS03615 PF01699 Sodium/calcium exchanger protein CNQ55_RS03620 PF00005 ABC transporter CNQ55_RS03625 PF02405 Permease MlaE CNQ55_RS03630 PF02470 MlaD protein CNQ55_RS03635 PF05494 MlaC protein CNQ55_RS03640 PF13466 STAS domain CNQ55_RS03645 PF01722 BolA-like protein CNQ55_RS03650 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CNQ55_RS03655 PF13693 Winged helix-turn-helix DNA-binding CNQ55_RS03660 PF00348 Polyprenyl synthetase CNQ55_RS03665 PF00829 Ribosomal prokaryotic L21 protein CNQ55_RS03670 PF01016 Ribosomal L27 protein CNQ55_RS03675 PF00892 EamA-like transporter family CNQ55_RS03680 PF01926 50S ribosome-binding GTPase CNQ55_RS03680 PF01018 GTP1/OBG CNQ55_RS03685 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CNQ55_RS03690 PF03449 Transcription elongation factor, N-terminal CNQ55_RS03690 PF01272 Transcription elongation factor, GreA/GreB, C-term CNQ55_RS03695 PF01985 CRS1 / YhbY (CRM) domain CNQ55_RS03700 PF01728 FtsJ-like methyltransferase CNQ55_RS03705 PF00004 ATPase family associated with various cellular activities (AAA) CNQ55_RS03705 PF06480 FtsH Extracellular CNQ55_RS03705 PF01434 Peptidase family M41 CNQ55_RS03705 PF17862 AAA+ lid domain CNQ55_RS03710 PF00809 Pterin binding enzyme CNQ55_RS03715 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CNQ55_RS03715 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CNQ55_RS03715 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CNQ55_RS03715 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CNQ55_RS03720 PF03840 Preprotein translocase SecG subunit CNQ55_RS03735 PF00884 Sulfatase CNQ55_RS03740 PF00764 Arginosuccinate synthase CNQ55_RS03750 PF02576 RimP N-terminal domain CNQ55_RS03750 PF17384 RimP C-terminal SH3 domain CNQ55_RS03755 PF00575 S1 RNA binding domain CNQ55_RS03755 PF08529 NusA N-terminal domain CNQ55_RS03755 PF13184 NusA-like KH domain CNQ55_RS03760 PF11987 Translation-initiation factor 2 CNQ55_RS03760 PF08364 Bacterial translation initiation factor IF-2 associated region CNQ55_RS03760 PF04760 Translation initiation factor IF-2, N-terminal region CNQ55_RS03760 PF00009 Elongation factor Tu GTP binding domain CNQ55_RS03765 PF02033 Ribosome-binding factor A CNQ55_RS03770 PF01509 TruB family pseudouridylate synthase (N terminal domain) CNQ55_RS03770 PF16198 tRNA pseudouridylate synthase B C-terminal domain CNQ55_RS03770 PF09157 Pseudouridine synthase II TruB, C-terminal CNQ55_RS03775 PF00312 Ribosomal protein S15 CNQ55_RS03780 PF00575 S1 RNA binding domain CNQ55_RS03780 PF03725 3' exoribonuclease family, domain 2 CNQ55_RS03780 PF01138 3' exoribonuclease family, domain 1 CNQ55_RS03780 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CNQ55_RS03780 PF00013 KH domain CNQ55_RS03785 PF07719 Tetratricopeptide repeat CNQ55_RS03785 PF13181 Tetratricopeptide repeat CNQ55_RS03795 PF00270 DEAD/DEAH box helicase CNQ55_RS03795 PF12343 Cold shock protein DEAD box A CNQ55_RS03795 PF00271 Helicase conserved C-terminal domain CNQ55_RS03795 PF03880 DbpA RNA binding domain CNQ55_RS03800 PF03222 Tryptophan/tyrosine permease family CNQ55_RS03805 PF00296 Luciferase-like monooxygenase CNQ55_RS03810 PF01136 Peptidase family U32 CNQ55_RS03815 PF01136 Peptidase family U32 CNQ55_RS03820 PF02036 SCP-2 sterol transfer family CNQ55_RS03825 PF13508 Acetyltransferase (GNAT) domain CNQ55_RS03830 PF01541 GIY-YIG catalytic domain CNQ55_RS03840 PF01965 DJ-1/PfpI family CNQ55_RS03845 PF13460 NAD(P)H-binding CNQ55_RS03850 PF03773 Predicted permease CNQ55_RS03855 PF04972 BON domain CNQ55_RS03860 PF13580 SIS domain CNQ55_RS03865 PF02021 Uncharacterised protein family UPF0102 CNQ55_RS03870 PF04348 LppC putative lipoprotein CNQ55_RS03875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CNQ55_RS03880 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CNQ55_RS03885 PF03613 PTS system mannose/fructose/sorbose family IID component CNQ55_RS03890 PF03609 PTS system sorbose-specific iic component CNQ55_RS03895 PF03830 PTS system sorbose subfamily IIB component CNQ55_RS03900 PF01116 Fructose-bisphosphate aldolase class-II CNQ55_RS03905 PF01380 SIS domain CNQ55_RS03910 PF01979 Amidohydrolase family CNQ55_RS03915 PF03610 PTS system fructose IIA component CNQ55_RS03920 PF03613 PTS system mannose/fructose/sorbose family IID component CNQ55_RS03925 PF03609 PTS system sorbose-specific iic component CNQ55_RS03930 PF03830 PTS system sorbose subfamily IIB component CNQ55_RS03935 PF08013 Tagatose 6 phosphate kinase CNQ55_RS03945 PF08220 DeoR-like helix-turn-helix domain CNQ55_RS03945 PF00455 DeoR C terminal sensor domain CNQ55_RS03950 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system CNQ55_RS03955 PF15937 prlF antitoxin for toxin YhaV_toxin CNQ55_RS03960 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CNQ55_RS03960 PF08666 SAF domain CNQ55_RS03965 PF07690 Major Facilitator Superfamily CNQ55_RS03970 PF03328 HpcH/HpaI aldolase/citrate lyase family CNQ55_RS03975 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CNQ55_RS03975 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CNQ55_RS03980 PF02595 Glycerate kinase family CNQ55_RS03995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS03995 PF03466 LysR substrate binding domain CNQ55_RS04000 PF00291 Pyridoxal-phosphate dependent enzyme CNQ55_RS04005 PF03222 Tryptophan/tyrosine permease family CNQ55_RS04010 PF00871 Acetokinase family CNQ55_RS04015 PF01228 Glycine radical CNQ55_RS04015 PF02901 Pyruvate formate lyase-like CNQ55_RS04020 PF01042 Endoribonuclease L-PSP CNQ55_RS04025 PF03313 Serine dehydratase alpha chain CNQ55_RS04025 PF03315 Serine dehydratase beta chain CNQ55_RS04035 PF03313 Serine dehydratase alpha chain CNQ55_RS04045 PF17954 Quercetinase C-terminal cupin domain CNQ55_RS04045 PF02678 Pirin CNQ55_RS04050 PF03466 LysR substrate binding domain CNQ55_RS04050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS04055 PF05656 Protein of unknown function (DUF805) CNQ55_RS04060 PF13409 Glutathione S-transferase, N-terminal domain CNQ55_RS04065 PF07681 DoxX CNQ55_RS04070 PF13997 YqjK-like protein CNQ55_RS04075 PF07332 Putative Actinobacterial Holin-X, holin superfamily III CNQ55_RS04080 PF05957 Bacterial protein of unknown function (DUF883) CNQ55_RS04085 PF06476 Protein of unknown function (DUF1090) CNQ55_RS04090 PF13721 SecD export protein N-terminal TM region CNQ55_RS04095 PF09335 SNARE associated Golgi protein CNQ55_RS04100 PF07729 FCD domain CNQ55_RS04100 PF00392 Bacterial regulatory proteins, gntR family CNQ55_RS04110 PF04449 CS1 type fimbrial major subunit CNQ55_RS04115 PF17271 TcfC Usher-like barrel domain CNQ55_RS04115 PF15976 CS1-pili formation C-terminal CNQ55_RS04115 PF16967 E-set like domain CNQ55_RS04125 PF07690 Major Facilitator Superfamily CNQ55_RS04130 PF02614 Glucuronate isomerase CNQ55_RS04135 PF08666 SAF domain CNQ55_RS04135 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CNQ55_RS04140 PF10688 Bacterial inner membrane protein CNQ55_RS04145 PF00375 Sodium:dicarboxylate symporter family CNQ55_RS04150 PF03741 Integral membrane protein TerC family CNQ55_RS04155 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CNQ55_RS04160 PF02698 DUF218 domain CNQ55_RS04165 PF01863 Protein of unknown function DUF45 CNQ55_RS04170 PF05175 Methyltransferase small domain CNQ55_RS04175 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system CNQ55_RS04180 PF01381 Helix-turn-helix CNQ55_RS04185 PF07992 Pyridine nucleotide-disulphide oxidoreductase CNQ55_RS04185 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CNQ55_RS04190 PF01204 Trehalase CNQ55_RS04200 PF13520 Amino acid permease CNQ55_RS04205 PF04074 YhcH/YjgK/YiaL CNQ55_RS04210 PF00703 Glycosyl hydrolases family 2 CNQ55_RS04210 PF16353 Domain of unknown function(DUF4981) CNQ55_RS04210 PF02837 Glycosyl hydrolases family 2, sugar binding domain CNQ55_RS04210 PF02929 Beta galactosidase small chain CNQ55_RS04210 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CNQ55_RS04215 PF00356 Bacterial regulatory proteins, lacI family CNQ55_RS04225 PF01588 Putative tRNA binding domain CNQ55_RS04240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CNQ55_RS04240 PF08447 PAS fold CNQ55_RS04245 PF03551 Transcriptional regulator PadR-like family CNQ55_RS04255 PF08021 Siderophore-interacting FAD-binding domain CNQ55_RS04255 PF04954 Siderophore-interacting protein CNQ55_RS04265 PF03167 Uracil DNA glycosylase superfamily CNQ55_RS04270 PF04545 Sigma-70, region 4 CNQ55_RS04270 PF04542 Sigma-70 region 2 CNQ55_RS04270 PF00140 Sigma-70 factor, region 1.2 CNQ55_RS04270 PF03979 Sigma-70 factor, region 1.1 CNQ55_RS04270 PF04539 Sigma-70 region 3 CNQ55_RS04270 PF04546 Sigma-70, non-essential region CNQ55_RS04280 PF08275 DNA primase catalytic core, N-terminal domain CNQ55_RS04280 PF01807 CHC2 zinc finger CNQ55_RS04280 PF10410 DnaB-helicase binding domain of primase CNQ55_RS04280 PF08278 DNA primase DnaG DnaB-binding CNQ55_RS04285 PF01165 Ribosomal protein S21 CNQ55_RS04295 PF00814 Glycoprotease family CNQ55_RS04300 PF00939 Sodium:sulfate symporter transmembrane region CNQ55_RS04305 PF05683 Fumarase C-terminus CNQ55_RS04310 PF05681 Fumarate hydratase (Fumerase) CNQ55_RS04320 PF03466 LysR substrate binding domain CNQ55_RS04320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS04325 PF02660 Glycerol-3-phosphate acyltransferase CNQ55_RS04330 PF02152 Dihydroneopterin aldolase CNQ55_RS04335 PF02673 Bacitracin resistance protein BacA CNQ55_RS04340 PF01966 HD domain CNQ55_RS04340 PF12627 Probable RNA and SrmB- binding site of polymerase A CNQ55_RS04340 PF01743 Poly A polymerase head domain CNQ55_RS04345 PF08239 Bacterial SH3 domain CNQ55_RS04355 PF01928 CYTH domain CNQ55_RS04360 PF03710 Glutamate-ammonia ligase adenylyltransferase CNQ55_RS04360 PF08335 GlnD PII-uridylyltransferase CNQ55_RS04365 PF00294 pfkB family carbohydrate kinase CNQ55_RS04365 PF01467 Cytidylyltransferase-like CNQ55_RS04375 PF01145 SPFH domain / Band 7 family CNQ55_RS04375 PF15975 Flotillin CNQ55_RS04380 PF07290 Protein of unknown function (DUF1449) CNQ55_RS04385 PF08971 Glycogen synthesis protein CNQ55_RS04390 PF04380 Membrane fusogenic activity CNQ55_RS04395 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CNQ55_RS04405 PF02535 ZIP Zinc transporter CNQ55_RS04410 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CNQ55_RS04415 PF02600 Disulfide bond formation protein DsbB CNQ55_RS04420 PF01323 DSBA-like thioredoxin domain CNQ55_RS04425 PF05935 Arylsulfotransferase (ASST) CNQ55_RS04425 PF17425 Arylsulfotransferase Ig-like domain CNQ55_RS04430 PF03738 Glutathionylspermidine synthase preATP-grasp CNQ55_RS04435 PF06693 Protein of unknown function (DUF1190) CNQ55_RS04445 PF02321 Outer membrane efflux protein CNQ55_RS04450 PF00293 NUDIX domain CNQ55_RS04455 PF06853 Protein of unknown function (DUF1249) CNQ55_RS04460 PF00149 Calcineurin-like phosphoesterase CNQ55_RS04465 PF05728 Uncharacterised protein family (UPF0227) CNQ55_RS04470 PF00204 DNA gyrase B CNQ55_RS04470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS04470 PF01751 Toprim domain CNQ55_RS04470 PF00986 DNA gyrase B subunit, carboxyl terminus CNQ55_RS04490 PF00294 pfkB family carbohydrate kinase CNQ55_RS04520 PF07715 TonB-dependent Receptor Plug Domain CNQ55_RS04525 PF00005 ABC transporter CNQ55_RS04530 PF01032 FecCD transport family CNQ55_RS04535 PF01032 FecCD transport family CNQ55_RS04545 PF01418 Helix-turn-helix domain, rpiR family CNQ55_RS04545 PF01380 SIS domain CNQ55_RS04550 PF03992 Antibiotic biosynthesis monooxygenase CNQ55_RS04555 PF02525 Flavodoxin-like fold CNQ55_RS04565 PF10840 Protein of unknown function (DUF2645) CNQ55_RS04570 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS04570 PF08521 Two-component sensor kinase N-terminal CNQ55_RS04570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS04575 PF00072 Response regulator receiver domain CNQ55_RS04575 PF00486 Transcriptional regulatory protein, C terminal CNQ55_RS04580 PF04076 Bacterial OB fold (BOF) protein CNQ55_RS04585 PF06445 GyrI-like small molecule binding domain CNQ55_RS04590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CNQ55_RS04595 PF00521 DNA gyrase/topoisomerase IV, subunit A CNQ55_RS04595 PF03989 DNA gyrase C-terminal domain, beta-propeller CNQ55_RS04600 PF01553 Acyltransferase CNQ55_RS04605 PF07731 Multicopper oxidase CNQ55_RS04605 PF00394 Multicopper oxidase CNQ55_RS04605 PF07732 Multicopper oxidase CNQ55_RS04610 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CNQ55_RS04620 PF03480 Bacterial extracellular solute-binding protein, family 7 CNQ55_RS04625 PF02615 Malate/L-lactate dehydrogenase CNQ55_RS04630 PF00107 Zinc-binding dehydrogenase CNQ55_RS04630 PF08240 Alcohol dehydrogenase GroES-like domain CNQ55_RS04640 PF00392 Bacterial regulatory proteins, gntR family CNQ55_RS04640 PF07729 FCD domain CNQ55_RS04645 PF04055 Radical SAM superfamily CNQ55_RS04645 PF08497 Radical SAM N-terminal CNQ55_RS04645 PF11842 Domain of unknown function (DUF3362) CNQ55_RS04650 PF04728 Lipoprotein leucine-zipper CNQ55_RS04655 PF12883 Protein of unknown function (DUF3828) CNQ55_RS04660 PF00248 Aldo/keto reductase family CNQ55_RS04665 PF00465 Iron-containing alcohol dehydrogenase CNQ55_RS04670 PF06719 AraC-type transcriptional regulator N-terminus CNQ55_RS04670 PF12833 Helix-turn-helix domain CNQ55_RS04675 PF09335 SNARE associated Golgi protein CNQ55_RS04680 PF01053 Cys/Met metabolism PLP-dependent enzyme CNQ55_RS04690 PF01618 MotA/TolQ/ExbB proton channel family CNQ55_RS04695 PF02472 Biopolymer transport protein ExbD/TolR CNQ55_RS04705 PF03350 Uncharacterized protein family, UPF0114 CNQ55_RS04710 PF00248 Aldo/keto reductase family CNQ55_RS04715 PF01738 Dienelactone hydrolase family CNQ55_RS04720 PF11115 Protein of unknown function (DUF2623) CNQ55_RS04730 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CNQ55_RS04730 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CNQ55_RS04735 PF13247 4Fe-4S dicluster domain CNQ55_RS04740 PF03916 Polysulphide reductase, NrfD CNQ55_RS04745 PF00374 Nickel-dependent hydrogenase CNQ55_RS04750 PF01750 Hydrogenase maturation protease CNQ55_RS04755 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE CNQ55_RS04760 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CNQ55_RS04765 PF01455 HupF/HypC family CNQ55_RS04770 PF02798 Glutathione S-transferase, N-terminal domain CNQ55_RS04775 PF05257 CHAP domain CNQ55_RS04775 PF03738 Glutathionylspermidine synthase preATP-grasp CNQ55_RS04785 PF01384 Phosphate transporter family CNQ55_RS04805 PF01943 Polysaccharide biosynthesis protein CNQ55_RS04815 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CNQ55_RS04820 PF03739 Lipopolysaccharide export system permease LptF/LptG CNQ55_RS04830 PF00155 Aminotransferase class I and II CNQ55_RS04835 PF00550 Phosphopantetheine attachment site CNQ55_RS04845 PF00501 AMP-binding enzyme CNQ55_RS04855 PF00392 Bacterial regulatory proteins, gntR family CNQ55_RS04855 PF07729 FCD domain CNQ55_RS04860 PF02913 FAD linked oxidases, C-terminal domain CNQ55_RS04860 PF01565 FAD binding domain CNQ55_RS04865 PF01565 FAD binding domain CNQ55_RS04870 PF13183 4Fe-4S dicluster domain CNQ55_RS04870 PF02754 Cysteine-rich domain CNQ55_RS04875 PF03928 Haem-degrading CNQ55_RS04880 PF01274 Malate synthase CNQ55_RS04885 PF02652 L-lactate permease CNQ55_RS04895 PF13322 Domain of unknown function (DUF4092) CNQ55_RS04895 PF13402 Peptidase M60, enhancin and enhancin-like CNQ55_RS04895 PF17291 N-terminal domain of M60-like peptidases CNQ55_RS04905 PF06750 Bacterial Peptidase A24 N-terminal domain CNQ55_RS04905 PF01478 Type IV leader peptidase family CNQ55_RS04910 PF16549 Type II secretion system (T2SS) pilotin, S protein CNQ55_RS04915 PF11356 Type II secretion system protein C CNQ55_RS04920 PF00263 Bacterial type II and III secretion system protein CNQ55_RS04920 PF03958 Bacterial type II/III secretion system short domain CNQ55_RS04925 PF00437 Type II/IV secretion system protein CNQ55_RS04930 PF00482 Type II secretion system (T2SS), protein F CNQ55_RS04935 PF08334 Type II secretion system (T2SS), protein G CNQ55_RS04935 PF07963 Prokaryotic N-terminal methylation motif CNQ55_RS04940 PF07963 Prokaryotic N-terminal methylation motif CNQ55_RS04945 PF07963 Prokaryotic N-terminal methylation motif CNQ55_RS04945 PF02501 Type II secretion system (T2SS), protein I CNQ55_RS04950 PF11612 Type II secretion system (T2SS), protein J CNQ55_RS04950 PF07963 Prokaryotic N-terminal methylation motif CNQ55_RS04955 PF03934 Type II secretion system (T2SS), protein K CNQ55_RS04960 PF12693 GspL periplasmic domain CNQ55_RS04965 PF04612 Type II secretion system (T2SS), protein M CNQ55_RS04970 PF01061 ABC-2 type transporter CNQ55_RS04975 PF00005 ABC transporter CNQ55_RS04980 PF01467 Cytidylyltransferase-like CNQ55_RS04990 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CNQ55_RS05005 PF05159 Capsule polysaccharide biosynthesis protein CNQ55_RS05010 PF05159 Capsule polysaccharide biosynthesis protein CNQ55_RS05015 PF02348 Cytidylyltransferase CNQ55_RS05020 PF02563 Polysaccharide biosynthesis/export protein CNQ55_RS05020 PF10531 SLBB domain CNQ55_RS05030 PF01380 SIS domain CNQ55_RS05030 PF00571 CBS domain CNQ55_RS05055 PF06755 CbtA_toxin of type IV toxin-antitoxin system CNQ55_RS05060 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A CNQ55_RS05065 PF06174 Protein of unknown function (DUF987) CNQ55_RS05070 PF04002 RadC-like JAB domain CNQ55_RS05075 PF03230 Antirestriction protein CNQ55_RS05080 PF06067 Domain of unknown function (DUF932) CNQ55_RS05090 PF06006 Bacterial protein of unknown function (DUF905) CNQ55_RS05105 PF03797 Autotransporter beta-domain CNQ55_RS05105 PF16168 Adhesin of bacterial autotransporter system, probable stalk CNQ55_RS05105 PF13018 Extended Signal Peptide of Type V secretion system CNQ55_RS05120 PF13148 Protein of unknown function (DUF3987) CNQ55_RS05175 PF01842 ACT domain CNQ55_RS05180 PF00455 DeoR C terminal sensor domain CNQ55_RS05180 PF08220 DeoR-like helix-turn-helix domain CNQ55_RS05185 PF00294 pfkB family carbohydrate kinase CNQ55_RS05190 PF07690 Major Facilitator Superfamily CNQ55_RS05205 PF03611 PTS system sugar-specific permease component CNQ55_RS05215 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CNQ55_RS05220 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CNQ55_RS05220 PF00356 Bacterial regulatory proteins, lacI family CNQ55_RS05230 PF00109 Beta-ketoacyl synthase, N-terminal domain CNQ55_RS05230 PF02801 Beta-ketoacyl synthase, C-terminal domain CNQ55_RS05245 PF00109 Beta-ketoacyl synthase, N-terminal domain CNQ55_RS05245 PF02801 Beta-ketoacyl synthase, C-terminal domain CNQ55_RS05270 PF00535 Glycosyl transferase family 2 CNQ55_RS05275 PF07977 FabA-like domain CNQ55_RS05290 PF00550 Phosphopantetheine attachment site CNQ55_RS05295 PF00550 Phosphopantetheine attachment site CNQ55_RS05300 PF01553 Acyltransferase CNQ55_RS05310 PF00891 O-methyltransferase domain CNQ55_RS05325 PF08479 POTRA domain, ShlB-type CNQ55_RS05325 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CNQ55_RS05325 PF17287 POTRA domain CNQ55_RS05330 PF04829 Pre-toxin domain with VENN motif CNQ55_RS05330 PF05860 haemagglutination activity domain CNQ55_RS05330 PF13332 Hemagglutinin repeat CNQ55_RS05330 PF05594 Haemagluttinin repeat CNQ55_RS05350 PF16747 Surface-adhesin protein E CNQ55_RS05360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CNQ55_RS05360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CNQ55_RS05365 PF07690 Major Facilitator Superfamily CNQ55_RS05380 PF13332 Hemagglutinin repeat CNQ55_RS05380 PF05860 haemagglutination activity domain CNQ55_RS05380 PF04829 Pre-toxin domain with VENN motif CNQ55_RS05410 PF07690 Major Facilitator Superfamily CNQ55_RS05420 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS05420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS05420 PF00672 HAMP domain CNQ55_RS05425 PF02954 Bacterial regulatory protein, Fis family CNQ55_RS05425 PF14532 Sigma-54 interaction domain CNQ55_RS05425 PF00072 Response regulator receiver domain CNQ55_RS05435 PF01497 Periplasmic binding protein CNQ55_RS05440 PF01032 FecCD transport family CNQ55_RS05445 PF00005 ABC transporter CNQ55_RS05445 PF08402 TOBE domain CNQ55_RS05450 PF00440 Bacterial regulatory proteins, tetR family CNQ55_RS05450 PF08361 MAATS-type transcriptional repressor, C-terminal region CNQ55_RS05495 PF03333 Adhesin biosynthesis transcription regulatory protein CNQ55_RS05505 PF00664 ABC transporter transmembrane region CNQ55_RS05505 PF00005 ABC transporter CNQ55_RS05505 PF03412 Peptidase C39 family CNQ55_RS05565 PF12833 Helix-turn-helix domain CNQ55_RS05575 PF13356 Arm DNA-binding domain CNQ55_RS05575 PF00589 Phage integrase family CNQ55_RS05585 PF04474 Protein of unknown function (DUF554) CNQ55_RS05595 PF01276 Orn/Lys/Arg decarboxylase, major domain CNQ55_RS05595 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CNQ55_RS05595 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CNQ55_RS05600 PF03825 Nucleoside H+ symporter CNQ55_RS05605 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CNQ55_RS05605 PF01464 Transglycosylase SLT domain CNQ55_RS05610 PF04362 Bacterial Fe(2+) trafficking CNQ55_RS05615 PF10576 Iron-sulfur binding domain of endonuclease III CNQ55_RS05615 PF00633 Helix-hairpin-helix motif CNQ55_RS05615 PF14815 NUDIX domain CNQ55_RS05615 PF00730 HhH-GPD superfamily base excision DNA repair protein CNQ55_RS05625 PF02390 Putative methyltransferase CNQ55_RS05630 PF04320 Protein with unknown function (DUF469) CNQ55_RS05635 PF11101 Protein of unknown function (DUF2884) CNQ55_RS05640 PF17763 Glutaminase/Asparaginase C-terminal domain CNQ55_RS05640 PF00710 Asparaginase, N-terminal CNQ55_RS05645 PF06717 Protein of unknown function (DUF1202) CNQ55_RS05650 PF04055 Radical SAM superfamily CNQ55_RS05650 PF06969 HemN C-terminal domain CNQ55_RS05655 PF01725 Ham1 family CNQ55_RS05660 PF02594 Uncharacterised ACR, YggU family COG1872 CNQ55_RS05665 PF02325 YGGT family CNQ55_RS05670 PF01168 Alanine racemase, N-terminal domain CNQ55_RS05675 PF00437 Type II/IV secretion system protein CNQ55_RS05680 PF03652 Holliday junction resolvase CNQ55_RS05685 PF02622 Uncharacterized ACR, COG1678 CNQ55_RS05690 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CNQ55_RS05690 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CNQ55_RS05695 PF04452 RNA methyltransferase CNQ55_RS05700 PF04231 Endonuclease I CNQ55_RS05705 PF17283 SprT-like zinc ribbon domain CNQ55_RS05705 PF10263 SprT-like family CNQ55_RS05710 PF00083 Sugar (and other) transporter CNQ55_RS05715 PF00438 S-adenosylmethionine synthetase, N-terminal domain CNQ55_RS05715 PF02772 S-adenosylmethionine synthetase, central domain CNQ55_RS05715 PF02773 S-adenosylmethionine synthetase, C-terminal domain CNQ55_RS05725 PF17430 Uncharacterized YqgC-like CNQ55_RS05730 PF11036 Virulence promoting factor CNQ55_RS05735 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CNQ55_RS05735 PF17944 Arginine decarboxylase C-terminal helical extension CNQ55_RS05735 PF17810 Arginine decarboxylase helical bundle domain CNQ55_RS05745 PF00491 Arginase family CNQ55_RS05750 PF01435 Peptidase family M48 CNQ55_RS05755 PF02779 Transketolase, pyrimidine binding domain CNQ55_RS05755 PF00456 Transketolase, thiamine diphosphate binding domain CNQ55_RS05755 PF02780 Transketolase, C-terminal domain CNQ55_RS05760 PF01145 SPFH domain / Band 7 family CNQ55_RS05765 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CNQ55_RS05770 PF02378 Phosphotransferase system, EIIC CNQ55_RS05770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CNQ55_RS05775 PF00107 Zinc-binding dehydrogenase CNQ55_RS05775 PF08240 Alcohol dehydrogenase GroES-like domain CNQ55_RS05785 PF05068 Mannitol repressor CNQ55_RS05795 PF00005 ABC transporter CNQ55_RS05800 PF00005 ABC transporter CNQ55_RS05825 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CNQ55_RS05825 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CNQ55_RS05830 PF00162 Phosphoglycerate kinase CNQ55_RS05835 PF01116 Fructose-bisphosphate aldolase class-II CNQ55_RS05840 PF00924 Mechanosensitive ion channel CNQ55_RS05840 PF05552 Conserved TM helix CNQ55_RS05845 PF01810 LysE type translocator CNQ55_RS05850 PF04402 Protein of unknown function (DUF541) CNQ55_RS05855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS05855 PF03466 LysR substrate binding domain CNQ55_RS05860 PF01642 Methylmalonyl-CoA mutase CNQ55_RS05860 PF02310 B12 binding domain CNQ55_RS05870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS05870 PF03466 LysR substrate binding domain CNQ55_RS05875 PF03466 LysR substrate binding domain CNQ55_RS05880 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CNQ55_RS05885 PF01842 ACT domain CNQ55_RS05885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CNQ55_RS05885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CNQ55_RS05900 PF01812 5-formyltetrahydrofolate cyclo-ligase family CNQ55_RS05910 PF05164 Cell division protein ZapA CNQ55_RS05920 PF03695 Uncharacterised protein family (UPF0149) CNQ55_RS05925 PF05195 Aminopeptidase P, N-terminal domain CNQ55_RS05925 PF00557 Metallopeptidase family M24 CNQ55_RS05930 PF01494 FAD binding domain CNQ55_RS05935 PF01494 FAD binding domain CNQ55_RS05940 PF01571 Aminomethyltransferase folate-binding domain CNQ55_RS05940 PF08669 Glycine cleavage T-protein C-terminal barrel domain CNQ55_RS05945 PF01597 Glycine cleavage H-protein CNQ55_RS05950 PF02347 Glycine cleavage system P-protein CNQ55_RS05955 PF00232 Glycosyl hydrolase family 1 CNQ55_RS05960 PF04266 ASCH domain CNQ55_RS05965 PF03006 Haemolysin-III related CNQ55_RS05970 PF01571 Aminomethyltransferase folate-binding domain CNQ55_RS05975 PF03937 Flavinator of succinate dehydrogenase CNQ55_RS05980 PF07254 Membrane-bound toxin component of toxin-antitoxin system CNQ55_RS05985 PF00258 Flavodoxin CNQ55_RS05990 PF00589 Phage integrase family CNQ55_RS05990 PF02899 Phage integrase, N-terminal SAM-like domain CNQ55_RS05995 PF10411 Disulfide bond isomerase protein N-terminus CNQ55_RS05995 PF13098 Thioredoxin-like domain CNQ55_RS06000 PF01368 DHH family CNQ55_RS06000 PF02272 DHHA1 domain CNQ55_RS06000 PF17768 RecJ OB domain CNQ55_RS06010 PF00152 tRNA synthetases class II (D, K and N) CNQ55_RS06010 PF01336 OB-fold nucleic acid binding domain CNQ55_RS06015 PF00293 NUDIX domain CNQ55_RS06025 PF00860 Permease family CNQ55_RS06035 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CNQ55_RS06035 PF13247 4Fe-4S dicluster domain CNQ55_RS06035 PF07992 Pyridine nucleotide-disulphide oxidoreductase CNQ55_RS06040 PF13247 4Fe-4S dicluster domain CNQ55_RS06045 PF00860 Permease family CNQ55_RS06050 PF01979 Amidohydrolase family CNQ55_RS06055 PF00860 Permease family CNQ55_RS06060 PF01799 [2Fe-2S] binding domain CNQ55_RS06060 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CNQ55_RS06060 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CNQ55_RS06065 PF00941 FAD binding domain in molybdopterin dehydrogenase CNQ55_RS06070 PF01979 Amidohydrolase family CNQ55_RS06075 PF07992 Pyridine nucleotide-disulphide oxidoreductase CNQ55_RS06075 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CNQ55_RS06080 PF12804 MobA-like NTP transferase domain CNQ55_RS06090 PF13478 XdhC Rossmann domain CNQ55_RS06090 PF02625 XdhC and CoxI family CNQ55_RS06095 PF00696 Amino acid kinase family CNQ55_RS06100 PF01979 Amidohydrolase family CNQ55_RS06105 PF01546 Peptidase family M20/M25/M40 CNQ55_RS06105 PF07687 Peptidase dimerisation domain CNQ55_RS06110 PF00291 Pyridoxal-phosphate dependent enzyme CNQ55_RS06115 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CNQ55_RS06115 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CNQ55_RS06120 PF02954 Bacterial regulatory protein, Fis family CNQ55_RS06120 PF13188 PAS domain CNQ55_RS06120 PF00158 Sigma-54 interaction domain CNQ55_RS06125 PF00111 2Fe-2S iron-sulfur cluster binding domain CNQ55_RS06125 PF01799 [2Fe-2S] binding domain CNQ55_RS06130 PF00941 FAD binding domain in molybdopterin dehydrogenase CNQ55_RS06130 PF03450 CO dehydrogenase flavoprotein C-terminal domain CNQ55_RS06135 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CNQ55_RS06135 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CNQ55_RS06145 PF01551 Peptidase family M23 CNQ55_RS06145 PF01476 LysM domain CNQ55_RS06155 PF03222 Tryptophan/tyrosine permease family CNQ55_RS06160 PF02803 Thiolase, C-terminal domain CNQ55_RS06160 PF00108 Thiolase, N-terminal domain CNQ55_RS06165 PF04962 KduI/IolB family CNQ55_RS06175 PF00083 Sugar (and other) transporter CNQ55_RS06180 PF01177 Asp/Glu/Hydantoin racemase CNQ55_RS06185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS06185 PF03466 LysR substrate binding domain CNQ55_RS06190 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CNQ55_RS06190 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CNQ55_RS06195 PF00356 Bacterial regulatory proteins, lacI family CNQ55_RS06200 PF01553 Acyltransferase CNQ55_RS06200 PF00501 AMP-binding enzyme CNQ55_RS06205 PF07690 Major Facilitator Superfamily CNQ55_RS06210 PF00248 Aldo/keto reductase family CNQ55_RS06215 PF06004 Bacterial protein of unknown function (DUF903) CNQ55_RS06220 PF03741 Integral membrane protein TerC family CNQ55_RS06225 PF02976 DNA mismatch repair enzyme MutH CNQ55_RS06230 PF00293 NUDIX domain CNQ55_RS06235 PF02896 PEP-utilising enzyme, TIM barrel domain CNQ55_RS06235 PF00391 PEP-utilising enzyme, mobile domain CNQ55_RS06235 PF05524 PEP-utilising enzyme, N-terminal CNQ55_RS06235 PF01590 GAF domain CNQ55_RS06240 PF01790 Prolipoprotein diacylglyceryl transferase CNQ55_RS06245 PF00303 Thymidylate synthase CNQ55_RS06250 PF07963 Prokaryotic N-terminal methylation motif CNQ55_RS06255 PF07963 Prokaryotic N-terminal methylation motif CNQ55_RS06260 PF10713 Protein of unknown function (DUF2509) CNQ55_RS06265 PF12528 Type II secretion prepilin peptidase dependent protein C CNQ55_RS06265 PF07963 Prokaryotic N-terminal methylation motif CNQ55_RS06270 PF17946 RecC C-terminal domain CNQ55_RS06275 PF16187 Middle or third domain of peptidase_M16 CNQ55_RS06275 PF05193 Peptidase M16 inactive domain CNQ55_RS06275 PF00675 Insulinase (Peptidase family M16) CNQ55_RS06280 PF13361 UvrD-like helicase C-terminal domain CNQ55_RS06280 PF00580 UvrD/REP helicase N-terminal domain CNQ55_RS06280 PF12705 PD-(D/E)XK nuclease superfamily CNQ55_RS06285 PF13538 UvrD-like helicase C-terminal domain CNQ55_RS06290 PF00583 Acetyltransferase (GNAT) family CNQ55_RS06290 PF00696 Amino acid kinase family CNQ55_RS06295 PF11741 AMIN domain CNQ55_RS06295 PF01520 N-acetylmuramoyl-L-alanine amidase CNQ55_RS06300 PF03123 CAT RNA binding domain CNQ55_RS06300 PF00874 PRD domain CNQ55_RS06305 PF02378 Phosphotransferase system, EIIC CNQ55_RS06305 PF00367 phosphotransferase system, EIIB CNQ55_RS06310 PF00155 Aminotransferase class I and II CNQ55_RS06315 PF00571 CBS domain CNQ55_RS06315 PF01380 SIS domain CNQ55_RS06320 PF01842 ACT domain CNQ55_RS06320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CNQ55_RS06320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CNQ55_RS06385 PF13296 Putative type VI secretion system Rhs element Vgr CNQ55_RS06385 PF04717 Type VI secretion system, phage-baseplate injector CNQ55_RS06385 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CNQ55_RS06390 PF10431 C-terminal, D2-small domain, of ClpB protein CNQ55_RS06390 PF17871 AAA lid domain CNQ55_RS06390 PF07724 AAA domain (Cdc48 subfamily) CNQ55_RS06390 PF00004 ATPase family associated with various cellular activities (AAA) CNQ55_RS06400 PF13488 Glycine zipper CNQ55_RS06400 PF00691 OmpA family CNQ55_RS06415 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CNQ55_RS06445 PF03562 MltA specific insert domain CNQ55_RS06445 PF06725 3D domain CNQ55_RS06450 PF00899 ThiF family CNQ55_RS06455 PF02657 Fe-S metabolism associated domain CNQ55_RS06460 PF00266 Aminotransferase class-V CNQ55_RS06465 PF06004 Bacterial protein of unknown function (DUF903) CNQ55_RS06470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS06470 PF03466 LysR substrate binding domain CNQ55_RS06475 PF04241 Protein of unknown function (DUF423) CNQ55_RS06480 PF01728 FtsJ-like methyltransferase CNQ55_RS06480 PF18125 RlmM ferredoxin-like domain CNQ55_RS06485 PF00455 DeoR C terminal sensor domain CNQ55_RS06485 PF08220 DeoR-like helix-turn-helix domain CNQ55_RS06490 PF05025 RbsD / FucU transport protein family CNQ55_RS06495 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CNQ55_RS06495 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CNQ55_RS06500 PF02952 L-fucose isomerase, C-terminal domain CNQ55_RS06500 PF07881 L-fucose isomerase, first N-terminal domain CNQ55_RS06500 PF07882 L-fucose isomerase, second N-terminal domain CNQ55_RS06505 PF07690 Major Facilitator Superfamily CNQ55_RS06510 PF00596 Class II Aldolase and Adducin N-terminal domain CNQ55_RS06515 PF00465 Iron-containing alcohol dehydrogenase CNQ55_RS06520 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CNQ55_RS06520 PF01367 5'-3' exonuclease, C-terminal SAM fold CNQ55_RS06525 PF03313 Serine dehydratase alpha chain CNQ55_RS06525 PF03315 Serine dehydratase beta chain CNQ55_RS06535 PF11892 Domain of unknown function (DUF3412) CNQ55_RS06535 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CNQ55_RS06535 PF03641 Possible lysine decarboxylase CNQ55_RS06540 PF14489 QueF-like protein CNQ55_RS06540 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CNQ55_RS06545 PF07348 Syd protein (SUKH-2) CNQ55_RS06550 PF04287 tRNA pseudouridine synthase C CNQ55_RS06555 PF00849 RNA pseudouridylate synthase CNQ55_RS06560 PF00258 Flavodoxin CNQ55_RS06565 PF07690 Major Facilitator Superfamily CNQ55_RS06570 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CNQ55_RS06570 PF13378 Enolase C-terminal domain-like CNQ55_RS06575 PF13378 Enolase C-terminal domain-like CNQ55_RS06580 PF00072 Response regulator receiver domain CNQ55_RS06580 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CNQ55_RS06580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS06580 PF00672 HAMP domain CNQ55_RS06580 PF01627 Hpt domain CNQ55_RS06580 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS06585 PF05958 tRNA (Uracil-5-)-methyltransferase CNQ55_RS06585 PF01938 TRAM domain CNQ55_RS06590 PF02824 TGS domain CNQ55_RS06590 PF04607 Region found in RelA / SpoT proteins CNQ55_RS06590 PF13291 ACT domain CNQ55_RS06595 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CNQ55_RS06600 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CNQ55_RS06605 PF03819 MazG nucleotide pyrophosphohydrolase domain CNQ55_RS06610 PF06418 CTP synthase N-terminus CNQ55_RS06610 PF00117 Glutamine amidotransferase class-I CNQ55_RS06615 PF03952 Enolase, N-terminal domain CNQ55_RS06615 PF00113 Enolase, C-terminal TIM barrel domain CNQ55_RS06620 PF04536 TPM domain CNQ55_RS06630 PF04536 TPM domain CNQ55_RS06640 PF04055 Radical SAM superfamily CNQ55_RS06645 PF00356 Bacterial regulatory proteins, lacI family CNQ55_RS06645 PF13407 Periplasmic binding protein domain CNQ55_RS06650 PF00251 Glycosyl hydrolases family 32 N-terminal domain CNQ55_RS06650 PF08244 Glycosyl hydrolases family 32 C terminal CNQ55_RS06655 PF02378 Phosphotransferase system, EIIC CNQ55_RS06655 PF00367 phosphotransferase system, EIIB CNQ55_RS06660 PF11471 Maltoporin periplasmic N-terminal extension CNQ55_RS06660 PF02264 LamB porin CNQ55_RS06665 PF00294 pfkB family carbohydrate kinase CNQ55_RS06670 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CNQ55_RS06670 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CNQ55_RS06675 PF07690 Major Facilitator Superfamily CNQ55_RS06685 PF02913 FAD linked oxidases, C-terminal domain CNQ55_RS06685 PF01565 FAD binding domain CNQ55_RS06690 PF00083 Sugar (and other) transporter CNQ55_RS06695 PF01012 Electron transfer flavoprotein domain CNQ55_RS06700 PF01012 Electron transfer flavoprotein domain CNQ55_RS06700 PF00766 Electron transfer flavoprotein FAD-binding domain CNQ55_RS06705 PF04309 Glycerol-3-phosphate responsive antiterminator CNQ55_RS06715 PF01266 FAD dependent oxidoreductase CNQ55_RS06720 PF01242 6-pyruvoyl tetrahydropterin synthase CNQ55_RS06725 PF00175 Oxidoreductase NAD-binding domain CNQ55_RS06725 PF00667 FAD binding domain CNQ55_RS06725 PF00258 Flavodoxin CNQ55_RS06730 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CNQ55_RS06730 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CNQ55_RS06735 PF01507 Phosphoadenosine phosphosulfate reductase family CNQ55_RS06745 PF01848 Hok/gef family CNQ55_RS06750 PF04389 Peptidase family M28 CNQ55_RS06755 PF01507 Phosphoadenosine phosphosulfate reductase family CNQ55_RS06760 PF00009 Elongation factor Tu GTP binding domain CNQ55_RS06770 PF12084 Protein of unknown function (DUF3561) CNQ55_RS06775 PF04977 Septum formation initiator CNQ55_RS06780 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CNQ55_RS06785 PF02542 YgbB family CNQ55_RS06790 PF01142 tRNA pseudouridine synthase D (TruD) CNQ55_RS06795 PF01975 Survival protein SurE CNQ55_RS06805 PF01476 LysM domain CNQ55_RS06805 PF01551 Peptidase family M23 CNQ55_RS06810 PF04542 Sigma-70 region 2 CNQ55_RS06810 PF00140 Sigma-70 factor, region 1.2 CNQ55_RS06810 PF04545 Sigma-70, region 4 CNQ55_RS06810 PF04539 Sigma-70 region 3 CNQ55_RS06815 PF03358 NADPH-dependent FMN reductase CNQ55_RS06825 PF02447 GntP family permease CNQ55_RS06830 PF01261 Xylose isomerase-like TIM barrel CNQ55_RS06835 PF00596 Class II Aldolase and Adducin N-terminal domain CNQ55_RS06840 PF17042 Nucleotide-binding C-terminal domain CNQ55_RS06840 PF07005 Sugar-binding N-terminal domain CNQ55_RS06845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CNQ55_RS06845 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CNQ55_RS06850 PF00455 DeoR C terminal sensor domain CNQ55_RS06850 PF08220 DeoR-like helix-turn-helix domain CNQ55_RS06855 PF00149 Calcineurin-like phosphoesterase CNQ55_RS06860 PF05192 MutS domain III CNQ55_RS06860 PF05190 MutS family domain IV CNQ55_RS06860 PF01624 MutS domain I CNQ55_RS06860 PF00488 MutS domain V CNQ55_RS06860 PF05188 MutS domain II CNQ55_RS06885 PF13358 DDE superfamily endonuclease CNQ55_RS06915 PF11756 Nitrous oxide-stimulated promoter CNQ55_RS06925 PF01590 GAF domain CNQ55_RS06925 PF00158 Sigma-54 interaction domain CNQ55_RS06930 PF02769 AIR synthase related protein, C-terminal domain CNQ55_RS06930 PF00586 AIR synthase related protein, N-terminal domain CNQ55_RS06935 PF01924 Hydrogenase formation hypA family CNQ55_RS06940 PF01455 HupF/HypC family CNQ55_RS06945 PF02492 CobW/HypB/UreG, nucleotide-binding domain CNQ55_RS06950 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CNQ55_RS06955 PF11046 Transcriptional repressor of hyc and hyp operons CNQ55_RS06965 PF13247 4Fe-4S dicluster domain CNQ55_RS06970 PF00361 Proton-conducting membrane transporter CNQ55_RS06975 PF00146 NADH dehydrogenase CNQ55_RS06980 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CNQ55_RS06980 PF00374 Nickel-dependent hydrogenase CNQ55_RS06980 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CNQ55_RS06985 PF12838 4Fe-4S dicluster domain CNQ55_RS06990 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CNQ55_RS06995 PF07450 Formate hydrogenlyase maturation protein HycH CNQ55_RS07000 PF01750 Hydrogenase maturation protease CNQ55_RS07010 PF01381 Helix-turn-helix CNQ55_RS07015 PF00232 Glycosyl hydrolase family 1 CNQ55_RS07020 PF02378 Phosphotransferase system, EIIC CNQ55_RS07020 PF00367 phosphotransferase system, EIIB CNQ55_RS07025 PF00356 Bacterial regulatory proteins, lacI family CNQ55_RS07030 PF12800 4Fe-4S binding domain CNQ55_RS07030 PF13247 4Fe-4S dicluster domain CNQ55_RS07035 PF17788 HypF Kae1-like domain CNQ55_RS07035 PF01300 Telomere recombination CNQ55_RS07035 PF07503 HypF finger CNQ55_RS07035 PF00708 Acylphosphatase CNQ55_RS07040 PF18113 Rubredoxin binding C-terminal domain CNQ55_RS07040 PF07992 Pyridine nucleotide-disulphide oxidoreductase CNQ55_RS07045 PF00258 Flavodoxin CNQ55_RS07045 PF00753 Metallo-beta-lactamase superfamily CNQ55_RS07045 PF00301 Rubredoxin CNQ55_RS07050 PF01590 GAF domain CNQ55_RS07050 PF00158 Sigma-54 interaction domain CNQ55_RS07055 PF00571 CBS domain CNQ55_RS07055 PF01380 SIS domain CNQ55_RS07060 PF00455 DeoR C terminal sensor domain CNQ55_RS07060 PF08220 DeoR-like helix-turn-helix domain CNQ55_RS07065 PF06923 Glucitol operon activator protein (GutM) CNQ55_RS07070 PF00106 short chain dehydrogenase CNQ55_RS07075 PF03829 PTS system glucitol/sorbitol-specific IIA component CNQ55_RS07080 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CNQ55_RS07080 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CNQ55_RS07085 PF03608 PTS system enzyme II sorbitol-specific factor CNQ55_RS07090 PF13406 Transglycosylase SLT domain CNQ55_RS07095 PF02464 Competence-damaged protein CNQ55_RS07100 PF00154 recA bacterial DNA recombination protein CNQ55_RS07105 PF02631 RecX family CNQ55_RS07110 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CNQ55_RS07110 PF01411 tRNA synthetases class II (A) CNQ55_RS07110 PF02272 DHHA1 domain CNQ55_RS07115 PF02599 Global regulator protein family CNQ55_RS07145 PF13419 Haloacid dehalogenase-like hydrolase CNQ55_RS07150 PF09335 SNARE associated Golgi protein CNQ55_RS07155 PF04262 Glutamate-cysteine ligase CNQ55_RS07160 PF02664 S-Ribosylhomocysteinase (LuxS) CNQ55_RS07165 PF07690 Major Facilitator Superfamily CNQ55_RS07170 PF00529 HlyD membrane-fusion protein of T1SS CNQ55_RS07170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CNQ55_RS07175 PF01047 MarR family CNQ55_RS07180 PF05437 Branched-chain amino acid transport protein (AzlD) CNQ55_RS07185 PF03591 AzlC protein CNQ55_RS07190 PF07690 Major Facilitator Superfamily CNQ55_RS07195 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CNQ55_RS07200 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS07205 PF00571 CBS domain CNQ55_RS07205 PF00005 ABC transporter CNQ55_RS07215 PF00268 Ribonucleotide reductase, small chain CNQ55_RS07220 PF08343 Ribonucleotide reductase N-terminal CNQ55_RS07220 PF02867 Ribonucleotide reductase, barrel domain CNQ55_RS07220 PF00317 Ribonucleotide reductase, all-alpha domain CNQ55_RS07225 PF07972 NrdI Flavodoxin like CNQ55_RS07230 PF00462 Glutaredoxin CNQ55_RS07240 PF02627 Carboxymuconolactone decarboxylase family CNQ55_RS07245 PF00155 Aminotransferase class I and II CNQ55_RS07245 PF00392 Bacterial regulatory proteins, gntR family CNQ55_RS07250 PF05957 Bacterial protein of unknown function (DUF883) CNQ55_RS07255 PF09400 Protein of unknown function (DUF2002) CNQ55_RS07260 PF06610 L-alanine exporter CNQ55_RS07265 PF00816 H-NS histone family CNQ55_RS07275 PF01022 Bacterial regulatory protein, arsR family CNQ55_RS07280 PF01679 Proteolipid membrane potential modulator CNQ55_RS07285 PF04972 BON domain CNQ55_RS07285 PF01476 LysM domain CNQ55_RS07290 PF00392 Bacterial regulatory proteins, gntR family CNQ55_RS07290 PF07729 FCD domain CNQ55_RS07295 PF00324 Amino acid permease CNQ55_RS07300 PF00202 Aminotransferase class-III CNQ55_RS07305 PF00171 Aldehyde dehydrogenase family CNQ55_RS07310 PF01266 FAD dependent oxidoreductase CNQ55_RS07315 PF08943 CsiD CNQ55_RS07330 PF01668 SmpB protein CNQ55_RS07335 PF03364 Polyketide cyclase / dehydrase and lipid transport CNQ55_RS07340 PF03658 RnfH family Ubiquitin CNQ55_RS07345 PF04355 SmpA / OmlA family CNQ55_RS07350 PF02463 RecF/RecN/SMC N terminal domain CNQ55_RS07355 PF01513 ATP-NAD kinase CNQ55_RS07365 PF01025 GrpE CNQ55_RS07370 PF00571 CBS domain CNQ55_RS07370 PF01595 Cyclin M transmembrane N-terminal domain CNQ55_RS07370 PF03471 Transporter associated domain CNQ55_RS07375 PF01578 Cytochrome C assembly protein CNQ55_RS07380 PF02881 SRP54-type protein, helical bundle domain CNQ55_RS07380 PF02978 Signal peptide binding domain CNQ55_RS07380 PF00448 SRP54-type protein, GTPase domain CNQ55_RS07385 PF00886 Ribosomal protein S16 CNQ55_RS07390 PF05239 PRC-barrel domain CNQ55_RS07390 PF01782 RimM N-terminal domain CNQ55_RS07395 PF01746 tRNA (Guanine-1)-methyltransferase CNQ55_RS07400 PF01245 Ribosomal protein L19 CNQ55_RS07405 PF00691 OmpA family CNQ55_RS07410 PF17152 Periplasmic sensor domain CNQ55_RS07410 PF00990 Diguanylate cyclase, GGDEF domain CNQ55_RS07415 PF13689 YfiR/HmsC-like CNQ55_RS07420 PF10973 Protein of unknown function (DUF2799) CNQ55_RS07425 PF00793 DAHP synthetase I family CNQ55_RS07430 PF02153 Prephenate dehydrogenase CNQ55_RS07430 PF01817 Chorismate mutase type II CNQ55_RS07435 PF00800 Prephenate dehydratase CNQ55_RS07435 PF01817 Chorismate mutase type II CNQ55_RS07440 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CNQ55_RS07450 PF13525 Outer membrane lipoprotein CNQ55_RS07455 PF00849 RNA pseudouridylate synthase CNQ55_RS07455 PF01479 S4 domain CNQ55_RS07460 PF02578 Multi-copper polyphenol oxidoreductase laccase CNQ55_RS07465 PF00004 ATPase family associated with various cellular activities (AAA) CNQ55_RS07465 PF10431 C-terminal, D2-small domain, of ClpB protein CNQ55_RS07465 PF02861 Clp amino terminal domain, pathogenicity island component CNQ55_RS07465 PF17871 AAA lid domain CNQ55_RS07465 PF07724 AAA domain (Cdc48 subfamily) CNQ55_RS07495 PF00665 Integrase core domain CNQ55_RS07495 PF13333 Integrase core domain CNQ55_RS07495 PF13276 HTH-like domain CNQ55_RS07515 PF00083 Sugar (and other) transporter CNQ55_RS07520 PF10043 Predicted periplasmic lipoprotein (DUF2279) CNQ55_RS07525 PF13091 PLD-like domain CNQ55_RS07530 PF00583 Acetyltransferase (GNAT) family CNQ55_RS07530 PF13380 CoA binding domain CNQ55_RS07530 PF13607 Succinyl-CoA ligase like flavodoxin domain CNQ55_RS07535 PF03942 DTW domain CNQ55_RS07540 PF00085 Thioredoxin CNQ55_RS07550 PF00588 SpoU rRNA Methylase family CNQ55_RS07550 PF08032 RNA 2'-O ribose methyltransferase substrate binding CNQ55_RS07555 PF03167 Uracil DNA glycosylase superfamily CNQ55_RS07560 PF01228 Glycine radical CNQ55_RS07565 PF01810 LysE type translocator CNQ55_RS07570 PF03466 LysR substrate binding domain CNQ55_RS07570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS07575 PF00270 DEAD/DEAH box helicase CNQ55_RS07575 PF00271 Helicase conserved C-terminal domain CNQ55_RS07580 PF05175 Methyltransferase small domain CNQ55_RS07585 PF00890 FAD binding domain CNQ55_RS07585 PF02910 Fumarate reductase flavoprotein C-term CNQ55_RS07590 PF08281 Sigma-70, region 4 CNQ55_RS07590 PF04542 Sigma-70 region 2 CNQ55_RS07595 PF03872 Anti sigma-E protein RseA, N-terminal domain CNQ55_RS07595 PF03873 Anti sigma-E protein RseA, C-terminal domain CNQ55_RS07600 PF03888 MucB/RseB N-terminal domain CNQ55_RS07600 PF17188 MucB/RseB C-terminal domain CNQ55_RS07610 PF00679 Elongation factor G C-terminus CNQ55_RS07610 PF00009 Elongation factor Tu GTP binding domain CNQ55_RS07610 PF03144 Elongation factor Tu domain 2 CNQ55_RS07610 PF06421 GTP-binding protein LepA C-terminus CNQ55_RS07615 PF10502 Signal peptidase, peptidase S26 CNQ55_RS07625 PF14622 Ribonuclease-III-like CNQ55_RS07625 PF00035 Double-stranded RNA binding motif CNQ55_RS07630 PF07650 KH domain CNQ55_RS07630 PF01926 50S ribosome-binding GTPase CNQ55_RS07635 PF02565 Recombination protein O C terminal CNQ55_RS07635 PF11967 Recombination protein O N terminal CNQ55_RS07640 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CNQ55_RS07645 PF01648 4'-phosphopantetheinyl transferase superfamily CNQ55_RS07660 PF12838 4Fe-4S dicluster domain CNQ55_RS07665 PF01380 SIS domain CNQ55_RS07665 PF01418 Helix-turn-helix domain, rpiR family CNQ55_RS07675 PF14437 MafB19-like deaminase CNQ55_RS07680 PF00497 Bacterial extracellular solute-binding proteins, family 3 CNQ55_RS07680 PF01464 Transglycosylase SLT domain CNQ55_RS07690 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CNQ55_RS07690 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CNQ55_RS07690 PF02769 AIR synthase related protein, C-terminal domain CNQ55_RS07695 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS07695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS07700 PF13942 YfhG lipoprotein CNQ55_RS07705 PF00072 Response regulator receiver domain CNQ55_RS07705 PF00158 Sigma-54 interaction domain CNQ55_RS07710 PF00543 Nitrogen regulatory protein P-II CNQ55_RS07715 PF00175 Oxidoreductase NAD-binding domain CNQ55_RS07715 PF00042 Globin CNQ55_RS07715 PF00970 Oxidoreductase FAD-binding domain CNQ55_RS07720 PF00464 Serine hydroxymethyltransferase CNQ55_RS07725 PF00480 ROK family CNQ55_RS07730 PF17128 Domain of unknown function (DUF5107) CNQ55_RS07730 PF13181 Tetratricopeptide repeat CNQ55_RS07735 PF13407 Periplasmic binding protein domain CNQ55_RS07740 PF00005 ABC transporter CNQ55_RS07745 PF02653 Branched-chain amino acid transport system / permease component CNQ55_RS07750 PF00107 Zinc-binding dehydrogenase CNQ55_RS07750 PF08240 Alcohol dehydrogenase GroES-like domain CNQ55_RS07755 PF01263 Aldose 1-epimerase CNQ55_RS07760 PF13276 HTH-like domain CNQ55_RS07760 PF00665 Integrase core domain CNQ55_RS07760 PF13333 Integrase core domain CNQ55_RS07770 PF07681 DoxX CNQ55_RS07775 PF12832 MFS_1 like family CNQ55_RS07780 PF00874 PRD domain CNQ55_RS07785 PF12146 Serine aminopeptidase, S33 CNQ55_RS07790 PF00459 Inositol monophosphatase family CNQ55_RS07795 PF00588 SpoU rRNA Methylase family CNQ55_RS07800 PF02082 Transcriptional regulator CNQ55_RS07805 PF00266 Aminotransferase class-V CNQ55_RS07810 PF01592 NifU-like N terminal domain CNQ55_RS07815 PF01521 Iron-sulphur cluster biosynthesis CNQ55_RS07820 PF07743 HSCB C-terminal oligomerisation domain CNQ55_RS07825 PF00012 Hsp70 protein CNQ55_RS07830 PF00111 2Fe-2S iron-sulfur cluster binding domain CNQ55_RS07835 PF04384 Iron-sulphur cluster assembly CNQ55_RS07840 PF12404 Peptidase CNQ55_RS07840 PF00883 Cytosol aminopeptidase family, catalytic domain CNQ55_RS07845 PF07179 SseB protein N-terminal domain CNQ55_RS07845 PF14581 SseB protein C-terminal domain CNQ55_RS07850 PF00581 Rhodanese-like domain CNQ55_RS07855 PF07703 Alpha-2-macroglobulin bait region domain CNQ55_RS07855 PF00207 Alpha-2-macroglobulin family CNQ55_RS07855 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CNQ55_RS07855 PF17962 Bacterial macroglobulin domain 6 CNQ55_RS07855 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CNQ55_RS07855 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CNQ55_RS07855 PF07678 A-macroglobulin TED domain CNQ55_RS07855 PF01835 MG2 domain CNQ55_RS07855 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CNQ55_RS07860 PF06832 Penicillin-Binding Protein C-terminus Family CNQ55_RS07860 PF00912 Transglycosylase CNQ55_RS07860 PF00905 Penicillin binding protein transpeptidase domain CNQ55_RS07865 PF00334 Nucleoside diphosphate kinase CNQ55_RS07870 PF04055 Radical SAM superfamily CNQ55_RS07875 PF13464 Domain of unknown function (DUF4115) CNQ55_RS07880 PF04551 GcpE protein CNQ55_RS07885 PF13393 Histidyl-tRNA synthetase CNQ55_RS07885 PF03129 Anticodon binding domain CNQ55_RS07890 PF09976 Tetratricopeptide repeat-like domain CNQ55_RS07895 PF13360 PQQ-like domain CNQ55_RS07900 PF01926 50S ribosome-binding GTPase CNQ55_RS07900 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CNQ55_RS07905 PF07191 zinc-ribbons CNQ55_RS07910 PF09134 Invasin, domain 3 CNQ55_RS07910 PF07979 Intimin C-type lectin domain CNQ55_RS07910 PF11924 Inverse autotransporter, beta-domain CNQ55_RS07910 PF02369 Bacterial Ig-like domain (group 1) CNQ55_RS07925 PF02601 Exonuclease VII, large subunit CNQ55_RS07925 PF13742 OB-fold nucleic acid binding domain CNQ55_RS07930 PF00571 CBS domain CNQ55_RS07930 PF00478 IMP dehydrogenase / GMP reductase domain CNQ55_RS07935 PF00958 GMP synthase C terminal domain CNQ55_RS07935 PF02540 NAD synthase CNQ55_RS07935 PF00117 Glutamine amidotransferase class-I CNQ55_RS07940 PF17358 Family of unknown function (DUF5384) CNQ55_RS07945 PF05433 Glycine zipper 2TM domain CNQ55_RS07955 PF11119 Protein of unknown function (DUF2633) CNQ55_RS07965 PF05231 MASE1 CNQ55_RS07965 PF00563 EAL domain CNQ55_RS07970 PF02541 Ppx/GppA phosphatase family CNQ55_RS07975 PF13089 Polyphosphate kinase N-terminal domain CNQ55_RS07975 PF13090 Polyphosphate kinase C-terminal domain 2 CNQ55_RS07975 PF02503 Polyphosphate kinase middle domain CNQ55_RS07975 PF17941 Polyphosphate kinase C-terminal domain 1 CNQ55_RS07980 PF00551 Formyl transferase CNQ55_RS07985 PF00586 AIR synthase related protein, N-terminal domain CNQ55_RS07985 PF02769 AIR synthase related protein, C-terminal domain CNQ55_RS08000 PF00860 Permease family CNQ55_RS08005 PF00308 Bacterial dnaA protein CNQ55_RS08010 PF03960 ArsC family CNQ55_RS08015 PF01435 Peptidase family M48 CNQ55_RS08020 PF01594 AI-2E family transporter CNQ55_RS08025 PF00578 AhpC/TSA family CNQ55_RS08030 PF01842 ACT domain CNQ55_RS08035 PF00701 Dihydrodipicolinate synthetase family CNQ55_RS08040 PF06804 NlpB/DapX lipoprotein CNQ55_RS08045 PF01259 SAICAR synthetase CNQ55_RS08050 PF04228 Putative neutral zinc metallopeptidase CNQ55_RS08055 PF13718 GNAT acetyltransferase 2 CNQ55_RS08055 PF08351 Domain of unknown function (DUF1726) CNQ55_RS08055 PF17176 tRNA-binding domain CNQ55_RS08055 PF05127 Helicase CNQ55_RS08060 PF02230 Phospholipase/Carboxylesterase CNQ55_RS08065 PF13980 Uncharacterised protein family (UPF0370) CNQ55_RS08070 PF07687 Peptidase dimerisation domain CNQ55_RS08070 PF01546 Peptidase family M20/M25/M40 CNQ55_RS08075 PF03960 ArsC family CNQ55_RS08080 PF00873 AcrB/AcrD/AcrF family CNQ55_RS08085 PF07730 Histidine kinase CNQ55_RS08085 PF00672 HAMP domain CNQ55_RS08085 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CNQ55_RS08085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS08090 PF07992 Pyridine nucleotide-disulphide oxidoreductase CNQ55_RS08090 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CNQ55_RS08090 PF13247 4Fe-4S dicluster domain CNQ55_RS08095 PF00293 NUDIX domain CNQ55_RS08105 PF06674 Protein of unknown function (DUF1176) CNQ55_RS08110 PF02780 Transketolase, C-terminal domain CNQ55_RS08110 PF02779 Transketolase, pyrimidine binding domain CNQ55_RS08110 PF00456 Transketolase, thiamine diphosphate binding domain CNQ55_RS08115 PF00923 Transaldolase/Fructose-6-phosphate aldolase CNQ55_RS08125 PF01515 Phosphate acetyl/butaryl transferase CNQ55_RS08125 PF00390 Malic enzyme, N-terminal domain CNQ55_RS08125 PF03949 Malic enzyme, NAD binding domain CNQ55_RS08135 PF00936 BMC domain CNQ55_RS08140 PF10662 Ethanolamine utilisation - propanediol utilisation CNQ55_RS08145 PF06249 Ethanolamine utilisation protein EutQ CNQ55_RS08150 PF01923 Cobalamin adenosyltransferase CNQ55_RS08155 PF01515 Phosphate acetyl/butaryl transferase CNQ55_RS08160 PF00936 BMC domain CNQ55_RS08165 PF03319 Ethanolamine utilisation protein EutN/carboxysome CNQ55_RS08170 PF00171 Aldehyde dehydrogenase family CNQ55_RS08180 PF00465 Iron-containing alcohol dehydrogenase CNQ55_RS08185 PF04346 Ethanolamine utilisation protein, EutH CNQ55_RS08190 PF06277 Ethanolamine utilisation protein EutA CNQ55_RS08195 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CNQ55_RS08200 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CNQ55_RS08205 PF00936 BMC domain CNQ55_RS08210 PF16365 Ethanolamine utilization protein EutK C-terminus CNQ55_RS08210 PF00936 BMC domain CNQ55_RS08215 PF12833 Helix-turn-helix domain CNQ55_RS08220 PF01218 Coproporphyrinogen III oxidase CNQ55_RS08225 PF01520 N-acetylmuramoyl-L-alanine amidase CNQ55_RS08230 PF00583 Acetyltransferase (GNAT) family CNQ55_RS08235 PF11143 Protein of unknown function (DUF2919) CNQ55_RS08240 PF06572 Protein of unknown function (DUF1131) CNQ55_RS08245 PF04261 Dyp-type peroxidase family CNQ55_RS08255 PF00367 phosphotransferase system, EIIB CNQ55_RS08255 PF02378 Phosphotransferase system, EIIC CNQ55_RS08260 PF01380 SIS domain CNQ55_RS08275 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS08280 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS08285 PF00005 ABC transporter CNQ55_RS08290 PF00291 Pyridoxal-phosphate dependent enzyme CNQ55_RS08300 PF08543 Phosphomethylpyrimidine kinase CNQ55_RS08305 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CNQ55_RS08310 PF02896 PEP-utilising enzyme, TIM barrel domain CNQ55_RS08310 PF00391 PEP-utilising enzyme, mobile domain CNQ55_RS08310 PF05524 PEP-utilising enzyme, N-terminal CNQ55_RS08315 PF00381 PTS HPr component phosphorylation site CNQ55_RS08320 PF00291 Pyridoxal-phosphate dependent enzyme CNQ55_RS08330 PF04354 ZipA, C-terminal FtsZ-binding domain CNQ55_RS08335 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CNQ55_RS08335 PF12826 Helix-hairpin-helix motif CNQ55_RS08335 PF00533 BRCA1 C Terminus (BRCT) domain CNQ55_RS08335 PF03120 NAD-dependent DNA ligase OB-fold domain CNQ55_RS08335 PF01653 NAD-dependent DNA ligase adenylation domain CNQ55_RS08340 PF12843 Putative quorum-sensing-regulated virulence factor CNQ55_RS08345 PF13593 SBF-like CPA transporter family (DUF4137) CNQ55_RS08350 PF03466 LysR substrate binding domain CNQ55_RS08350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS08355 PF03502 Nucleoside-specific channel-forming protein, Tsx CNQ55_RS08360 PF01048 Phosphorylase superfamily CNQ55_RS08365 PF03825 Nucleoside H+ symporter CNQ55_RS08375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS08375 PF03466 LysR substrate binding domain CNQ55_RS08400 PF00749 tRNA synthetases class I (E and Q), catalytic domain CNQ55_RS08405 PF07037 Putative transcription regulator (DUF1323) CNQ55_RS08410 PF07037 Putative transcription regulator (DUF1323) CNQ55_RS08425 PF00563 EAL domain CNQ55_RS08425 PF05231 MASE1 CNQ55_RS08430 PF07662 Na+ dependent nucleoside transporter C-terminus CNQ55_RS08430 PF07670 Nucleoside recognition CNQ55_RS08430 PF01773 Na+ dependent nucleoside transporter N-terminus CNQ55_RS08435 PF01566 Natural resistance-associated macrophage protein CNQ55_RS08440 PF10697 Protein of unknown function (DUF2502) CNQ55_RS08445 PF00654 Voltage gated chloride channel CNQ55_RS08450 PF02685 Glucokinase CNQ55_RS08455 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CNQ55_RS08460 PF02378 Phosphotransferase system, EIIC CNQ55_RS08465 PF01321 Creatinase/Prolidase N-terminal domain CNQ55_RS08465 PF00557 Metallopeptidase family M24 CNQ55_RS08470 PF05343 M42 glutamyl aminopeptidase CNQ55_RS08475 PF00391 PEP-utilising enzyme, mobile domain CNQ55_RS08475 PF02896 PEP-utilising enzyme, TIM barrel domain CNQ55_RS08475 PF05524 PEP-utilising enzyme, N-terminal CNQ55_RS08475 PF00381 PTS HPr component phosphorylation site CNQ55_RS08475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CNQ55_RS08480 PF12833 Helix-turn-helix domain CNQ55_RS08485 PF00072 Response regulator receiver domain CNQ55_RS08485 PF04397 LytTr DNA-binding domain CNQ55_RS08490 PF06580 Histidine kinase CNQ55_RS08490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS08490 PF07694 5TMR of 5TMR-LYT CNQ55_RS08495 PF00155 Aminotransferase class I and II CNQ55_RS08500 PF03279 Bacterial lipid A biosynthesis acyltransferase CNQ55_RS08505 PF10810 Protein of unknown function (DUF2545) CNQ55_RS08515 PF10938 YfdX protein CNQ55_RS08520 PF02515 CoA-transferase family III CNQ55_RS08525 PF00205 Thiamine pyrophosphate enzyme, central domain CNQ55_RS08525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CNQ55_RS08525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CNQ55_RS08530 PF03547 Membrane transport protein CNQ55_RS08535 PF02515 CoA-transferase family III CNQ55_RS08540 PF00497 Bacterial extracellular solute-binding proteins, family 3 CNQ55_RS08540 PF00072 Response regulator receiver domain CNQ55_RS08540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS08540 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS08545 PF00072 Response regulator receiver domain CNQ55_RS08545 PF00196 Bacterial regulatory proteins, luxR family CNQ55_RS08550 PF00529 HlyD membrane-fusion protein of T1SS CNQ55_RS08550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CNQ55_RS08555 PF07690 Major Facilitator Superfamily CNQ55_RS08560 PF00291 Pyridoxal-phosphate dependent enzyme CNQ55_RS08570 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CNQ55_RS08570 PF00356 Bacterial regulatory proteins, lacI family CNQ55_RS08575 PF00251 Glycosyl hydrolases family 32 N-terminal domain CNQ55_RS08575 PF08244 Glycosyl hydrolases family 32 C terminal CNQ55_RS08580 PF00294 pfkB family carbohydrate kinase CNQ55_RS08585 PF01306 LacY proton/sugar symporter CNQ55_RS08600 PF01226 Formate/nitrite transporter CNQ55_RS08610 PF04333 MlaA lipoprotein CNQ55_RS08615 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CNQ55_RS08625 PF04175 Protein of unknown function (DUF406) CNQ55_RS08630 PF02803 Thiolase, C-terminal domain CNQ55_RS08630 PF00108 Thiolase, N-terminal domain CNQ55_RS08635 PF00378 Enoyl-CoA hydratase/isomerase CNQ55_RS08635 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CNQ55_RS08635 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CNQ55_RS08640 PF00300 Histidine phosphatase superfamily (branch 1) CNQ55_RS08645 PF00419 Fimbrial protein CNQ55_RS08650 PF13954 PapC N-terminal domain CNQ55_RS08650 PF13953 PapC C-terminal domain CNQ55_RS08650 PF00577 Outer membrane usher protein CNQ55_RS08655 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CNQ55_RS08655 PF02753 Pili assembly chaperone PapD, C-terminal domain CNQ55_RS08660 PF00419 Fimbrial protein CNQ55_RS08665 PF00419 Fimbrial protein CNQ55_RS08670 PF00419 Fimbrial protein CNQ55_RS08675 PF11245 Protein of unknown function (DUF2544) CNQ55_RS08685 PF01713 Smr domain CNQ55_RS08690 PF05175 Methyltransferase small domain CNQ55_RS08695 PF01264 Chorismate synthase CNQ55_RS08700 PF03411 Penicillin-insensitive murein endopeptidase CNQ55_RS08705 PF01925 Sulfite exporter TauE/SafE CNQ55_RS08710 PF04315 Elongation factor P hydroxylase CNQ55_RS08715 PF08891 YfcL protein CNQ55_RS08720 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CNQ55_RS08720 PF01266 FAD dependent oxidoreductase CNQ55_RS08725 PF02801 Beta-ketoacyl synthase, C-terminal domain CNQ55_RS08725 PF00109 Beta-ketoacyl synthase, N-terminal domain CNQ55_RS08735 PF07690 Major Facilitator Superfamily CNQ55_RS08745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CNQ55_RS08745 PF11890 Domain of unknown function (DUF3410) CNQ55_RS08745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CNQ55_RS08750 PF01118 Semialdehyde dehydrogenase, NAD binding domain CNQ55_RS08750 PF02774 Semialdehyde dehydrogenase, dimerisation domain CNQ55_RS08755 PF01416 tRNA pseudouridine synthase CNQ55_RS08760 PF09335 SNARE associated Golgi protein CNQ55_RS08765 PF01039 Carboxyl transferase domain CNQ55_RS08765 PF17848 Acetyl-coA carboxylase zinc finger domain CNQ55_RS08770 PF02875 Mur ligase family, glutamate ligase domain CNQ55_RS08770 PF08245 Mur ligase middle domain CNQ55_RS08775 PF05036 Sporulation related domain CNQ55_RS08780 PF02674 Colicin V production protein CNQ55_RS08785 PF00156 Phosphoribosyl transferase domain CNQ55_RS08790 PF02441 Flavoprotein CNQ55_RS08795 PF00497 Bacterial extracellular solute-binding proteins, family 3 CNQ55_RS08800 PF00497 Bacterial extracellular solute-binding proteins, family 3 CNQ55_RS08805 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS08810 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS08815 PF00005 ABC transporter CNQ55_RS08820 PF04754 Putative transposase, YhgA-like CNQ55_RS08825 PF01370 NAD dependent epimerase/dehydratase family CNQ55_RS08825 PF08338 Domain of unknown function (DUF1731) CNQ55_RS08830 PF02152 Dihydroneopterin aldolase CNQ55_RS08835 PF00043 Glutathione S-transferase, C-terminal domain CNQ55_RS08835 PF02798 Glutathione S-transferase, N-terminal domain CNQ55_RS08840 PF14834 Glutathione S-transferase, C-terminal domain CNQ55_RS08840 PF02798 Glutathione S-transferase, N-terminal domain CNQ55_RS08845 PF12850 Calcineurin-like phosphoesterase superfamily domain CNQ55_RS08850 PF00293 NUDIX domain CNQ55_RS08855 PF03606 C4-dicarboxylate anaerobic carrier CNQ55_RS08860 PF07085 DRTGG domain CNQ55_RS08860 PF01515 Phosphate acetyl/butaryl transferase CNQ55_RS08865 PF00871 Acetokinase family CNQ55_RS08870 PF04217 Protein of unknown function, DUF412 CNQ55_RS08875 PF03887 YfbU domain CNQ55_RS08880 PF13419 Haloacid dehalogenase-like hydrolase CNQ55_RS08885 PF02080 TrkA-C domain CNQ55_RS08885 PF03600 Citrate transporter CNQ55_RS08895 PF00155 Aminotransferase class I and II CNQ55_RS08905 PF03466 LysR substrate binding domain CNQ55_RS08905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS08910 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CNQ55_RS08915 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CNQ55_RS08920 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CNQ55_RS08920 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CNQ55_RS08930 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CNQ55_RS08930 PF10531 SLBB domain CNQ55_RS08930 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CNQ55_RS08935 PF01568 Molydopterin dinucleotide binding domain CNQ55_RS08935 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CNQ55_RS08935 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CNQ55_RS08935 PF00384 Molybdopterin oxidoreductase CNQ55_RS08940 PF00146 NADH dehydrogenase CNQ55_RS08945 PF12838 4Fe-4S dicluster domain CNQ55_RS08950 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CNQ55_RS08955 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CNQ55_RS08960 PF00361 Proton-conducting membrane transporter CNQ55_RS08960 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CNQ55_RS08965 PF00361 Proton-conducting membrane transporter CNQ55_RS08970 PF00361 Proton-conducting membrane transporter CNQ55_RS08975 PF08974 Domain of unknown function (DUF1877) CNQ55_RS08980 PF04389 Peptidase family M28 CNQ55_RS08985 PF02902 Ulp1 protease family, C-terminal catalytic domain CNQ55_RS08990 PF12706 Beta-lactamase superfamily domain CNQ55_RS08995 PF13673 Acetyltransferase (GNAT) domain CNQ55_RS09000 PF05957 Bacterial protein of unknown function (DUF883) CNQ55_RS09005 PF00425 chorismate binding enzyme CNQ55_RS09010 PF16582 Middle domain of thiamine pyrophosphate CNQ55_RS09010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CNQ55_RS09010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CNQ55_RS09015 PF12697 Alpha/beta hydrolase family CNQ55_RS09020 PF00378 Enoyl-CoA hydratase/isomerase CNQ55_RS09025 PF13378 Enolase C-terminal domain-like CNQ55_RS09030 PF00501 AMP-binding enzyme CNQ55_RS09030 PF13193 AMP-binding enzyme C-terminal domain CNQ55_RS09045 PF00892 EamA-like transporter family CNQ55_RS09050 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CNQ55_RS09055 PF01522 Polysaccharide deacetylase CNQ55_RS09060 PF02911 Formyl transferase, C-terminal domain CNQ55_RS09060 PF00551 Formyl transferase CNQ55_RS09060 PF01370 NAD dependent epimerase/dehydratase family CNQ55_RS09065 PF00535 Glycosyl transferase family 2 CNQ55_RS09070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CNQ55_RS09075 PF00300 Histidine phosphatase superfamily (branch 1) CNQ55_RS09080 PF00293 NUDIX domain CNQ55_RS09085 PF07437 YfaZ precursor CNQ55_RS09090 PF00994 Probable molybdopterin binding domain CNQ55_RS09095 PF01614 Bacterial transcriptional regulator CNQ55_RS09095 PF09339 IclR helix-turn-helix domain CNQ55_RS09100 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CNQ55_RS09100 PF13378 Enolase C-terminal domain-like CNQ55_RS09105 PF07690 Major Facilitator Superfamily CNQ55_RS09110 PF03328 HpcH/HpaI aldolase/citrate lyase family CNQ55_RS09120 PF04754 Putative transposase, YhgA-like CNQ55_RS09125 PF02754 Cysteine-rich domain CNQ55_RS09125 PF13183 4Fe-4S dicluster domain CNQ55_RS09130 PF00890 FAD binding domain CNQ55_RS09135 PF01266 FAD dependent oxidoreductase CNQ55_RS09135 PF04324 BFD-like [2Fe-2S] binding domain CNQ55_RS09140 PF07690 Major Facilitator Superfamily CNQ55_RS09145 PF03009 Glycerophosphoryl diester phosphodiesterase family CNQ55_RS09155 PF00111 2Fe-2S iron-sulfur cluster binding domain CNQ55_RS09160 PF00268 Ribonucleotide reductase, small chain CNQ55_RS09165 PF02867 Ribonucleotide reductase, barrel domain CNQ55_RS09165 PF03477 ATP cone domain CNQ55_RS09165 PF00317 Ribonucleotide reductase, all-alpha domain CNQ55_RS09170 PF03797 Autotransporter beta-domain CNQ55_RS09170 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat CNQ55_RS09170 PF12951 Passenger-associated-transport-repeat CNQ55_RS09180 PF00521 DNA gyrase/topoisomerase IV, subunit A CNQ55_RS09180 PF03989 DNA gyrase C-terminal domain, beta-propeller CNQ55_RS09185 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) CNQ55_RS09190 PF06672 Protein of unknown function (DUF1175) CNQ55_RS09195 PF01835 MG2 domain CNQ55_RS09195 PF07703 Alpha-2-macroglobulin bait region domain CNQ55_RS09195 PF00207 Alpha-2-macroglobulin family CNQ55_RS09200 PF08486 Stage II sporulation protein CNQ55_RS09200 PF10062 Predicted secreted protein (DUF2300) CNQ55_RS09205 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) CNQ55_RS09210 PF00108 Thiolase, N-terminal domain CNQ55_RS09210 PF02803 Thiolase, C-terminal domain CNQ55_RS09215 PF02667 Short chain fatty acid transporter CNQ55_RS09220 PF01144 Coenzyme A transferase CNQ55_RS09225 PF01144 Coenzyme A transferase CNQ55_RS09230 PF00072 Response regulator receiver domain CNQ55_RS09230 PF02954 Bacterial regulatory protein, Fis family CNQ55_RS09230 PF00158 Sigma-54 interaction domain CNQ55_RS09235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS09235 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS09235 PF00989 PAS fold CNQ55_RS09240 PF09456 RcsC Alpha-Beta-Loop (ABL) CNQ55_RS09240 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS09240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS09240 PF00072 Response regulator receiver domain CNQ55_RS09245 PF00196 Bacterial regulatory proteins, luxR family CNQ55_RS09245 PF00072 Response regulator receiver domain CNQ55_RS09250 PF16359 RcsD-ABL domain CNQ55_RS09250 PF01627 Hpt domain CNQ55_RS09250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS09265 PF00267 Gram-negative porin CNQ55_RS09270 PF02424 ApbE family CNQ55_RS09275 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CNQ55_RS09275 PF02805 Metal binding domain of Ada CNQ55_RS09275 PF12833 Helix-turn-helix domain CNQ55_RS09275 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CNQ55_RS09280 PF13532 2OG-Fe(II) oxygenase superfamily CNQ55_RS09285 PF00005 ABC transporter CNQ55_RS09290 PF06039 Malate:quinone oxidoreductase (Mqo) CNQ55_RS09295 PF03974 Ecotin CNQ55_RS09305 PF00037 4Fe-4S binding domain CNQ55_RS09305 PF13187 4Fe-4S dicluster domain CNQ55_RS09305 PF12800 4Fe-4S binding domain CNQ55_RS09310 PF03927 NapD protein CNQ55_RS09315 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CNQ55_RS09315 PF00384 Molybdopterin oxidoreductase CNQ55_RS09315 PF01568 Molydopterin dinucleotide binding domain CNQ55_RS09320 PF12800 4Fe-4S binding domain CNQ55_RS09320 PF12838 4Fe-4S dicluster domain CNQ55_RS09325 PF13237 4Fe-4S dicluster domain CNQ55_RS09325 PF12801 4Fe-4S binding domain CNQ55_RS09330 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CNQ55_RS09335 PF03264 NapC/NirT cytochrome c family, N-terminal region CNQ55_RS09340 PF00005 ABC transporter CNQ55_RS09345 PF03379 CcmB protein CNQ55_RS09350 PF01578 Cytochrome C assembly protein CNQ55_RS09355 PF04995 Heme exporter protein D (CcmD) CNQ55_RS09360 PF03100 CcmE CNQ55_RS09365 PF01578 Cytochrome C assembly protein CNQ55_RS09365 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CNQ55_RS09370 PF08534 Redoxin CNQ55_RS09375 PF03918 Cytochrome C biogenesis protein CNQ55_RS09380 PF00196 Bacterial regulatory proteins, luxR family CNQ55_RS09380 PF00072 Response regulator receiver domain CNQ55_RS09395 PF00884 Sulfatase CNQ55_RS09395 PF11893 Domain of unknown function (DUF3413) CNQ55_RS09400 PF07208 Protein of unknown function (DUF1414) CNQ55_RS09405 PF04245 37-kD nucleoid-associated bacterial protein CNQ55_RS09410 PF01386 Ribosomal L25p family CNQ55_RS09415 PF04851 Type III restriction enzyme, res subunit CNQ55_RS09415 PF00271 Helicase conserved C-terminal domain CNQ55_RS09425 PF01479 S4 domain CNQ55_RS09425 PF00849 RNA pseudouridylate synthase CNQ55_RS09430 PF07690 Major Facilitator Superfamily CNQ55_RS09440 PF13989 YejG-like protein CNQ55_RS09445 PF00005 ABC transporter CNQ55_RS09445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CNQ55_RS09450 PF12911 N-terminal TM domain of oligopeptide transport permease C CNQ55_RS09450 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS09455 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS09460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CNQ55_RS09465 PF12792 CSS motif domain associated with EAL CNQ55_RS09465 PF00563 EAL domain CNQ55_RS09470 PF00877 NlpC/P60 family CNQ55_RS09475 PF01569 PAP2 superfamily CNQ55_RS09480 PF02492 CobW/HypB/UreG, nucleotide-binding domain CNQ55_RS09480 PF07683 Cobalamin synthesis protein cobW C-terminal domain CNQ55_RS09485 PF08125 Mannitol dehydrogenase C-terminal domain CNQ55_RS09485 PF01232 Mannitol dehydrogenase Rossmann domain CNQ55_RS09490 PF01132 Elongation factor P (EF-P) OB domain CNQ55_RS09490 PF08207 Elongation factor P (EF-P) KOW-like domain CNQ55_RS09490 PF09285 Elongation factor P, C-terminal CNQ55_RS09495 PF03692 Putative zinc- or iron-chelating domain CNQ55_RS09500 PF07690 Major Facilitator Superfamily CNQ55_RS09505 PF00381 PTS HPr component phosphorylation site CNQ55_RS09505 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CNQ55_RS09510 PF00294 pfkB family carbohydrate kinase CNQ55_RS09515 PF02378 Phosphotransferase system, EIIC CNQ55_RS09515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CNQ55_RS09525 PF00294 pfkB family carbohydrate kinase CNQ55_RS09530 PF04227 Indigoidine synthase A like protein CNQ55_RS09535 PF07662 Na+ dependent nucleoside transporter C-terminus CNQ55_RS09535 PF01773 Na+ dependent nucleoside transporter N-terminus CNQ55_RS09540 PF00027 Cyclic nucleotide-binding domain CNQ55_RS09545 PF01156 Inosine-uridine preferring nucleoside hydrolase CNQ55_RS09550 PF07662 Na+ dependent nucleoside transporter C-terminus CNQ55_RS09550 PF01773 Na+ dependent nucleoside transporter N-terminus CNQ55_RS09555 PF00294 pfkB family carbohydrate kinase CNQ55_RS09560 PF01261 Xylose isomerase-like TIM barrel CNQ55_RS09565 PF03601 Conserved hypothetical protein 698 CNQ55_RS09570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS09570 PF03466 LysR substrate binding domain CNQ55_RS09580 PF00324 Amino acid permease CNQ55_RS09590 PF00593 TonB dependent receptor CNQ55_RS09590 PF07715 TonB-dependent Receptor Plug Domain CNQ55_RS09595 PF00756 Putative esterase CNQ55_RS09610 PF01227 GTP cyclohydrolase I CNQ55_RS09615 PF04235 Protein of unknown function (DUF418) CNQ55_RS09625 PF00356 Bacterial regulatory proteins, lacI family CNQ55_RS09630 PF13407 Periplasmic binding protein domain CNQ55_RS09635 PF00005 ABC transporter CNQ55_RS09640 PF02653 Branched-chain amino acid transport system / permease component CNQ55_RS09645 PF01180 Dihydroorotate dehydrogenase CNQ55_RS09650 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CNQ55_RS09650 PF07992 Pyridine nucleotide-disulphide oxidoreductase CNQ55_RS09655 PF10808 Protein of unknown function (DUF2542) CNQ55_RS09660 PF02698 DUF218 domain CNQ55_RS09665 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CNQ55_RS09665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CNQ55_RS09670 PF04172 LrgB-like family CNQ55_RS09675 PF03788 LrgA family CNQ55_RS09680 PF01207 Dihydrouridine synthase (Dus) CNQ55_RS09700 PF02321 Outer membrane efflux protein CNQ55_RS09710 PF09335 SNARE associated Golgi protein CNQ55_RS09715 PF04893 Yip1 domain CNQ55_RS09720 PF00768 D-alanyl-D-alanine carboxypeptidase CNQ55_RS09725 PF01565 FAD binding domain CNQ55_RS09725 PF09330 D-lactate dehydrogenase, membrane binding CNQ55_RS09730 PF01915 Glycosyl hydrolase family 3 C-terminal domain CNQ55_RS09730 PF00933 Glycosyl hydrolase family 3 N terminal domain CNQ55_RS09730 PF14310 Fibronectin type III-like domain CNQ55_RS09735 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CNQ55_RS09740 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS09745 PF00005 ABC transporter CNQ55_RS09750 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS09760 PF13411 MerR HTH family regulatory protein CNQ55_RS09765 PF07694 5TMR of 5TMR-LYT CNQ55_RS09765 PF06580 Histidine kinase CNQ55_RS09770 PF00072 Response regulator receiver domain CNQ55_RS09770 PF04397 LytTr DNA-binding domain CNQ55_RS09775 PF07308 Protein of unknown function (DUF1456) CNQ55_RS09780 PF06998 Protein of unknown function (DUF1307) CNQ55_RS09785 PF04434 SWIM zinc finger CNQ55_RS09790 PF05762 VWA domain containing CoxE-like protein CNQ55_RS09800 PF07728 AAA domain (dynein-related subfamily) CNQ55_RS09810 PF13569 Domain of unknown function (DUF4132) CNQ55_RS09815 PF13569 Domain of unknown function (DUF4132) CNQ55_RS09820 PF09334 tRNA synthetases class I (M) CNQ55_RS09820 PF01588 Putative tRNA binding domain CNQ55_RS09825 PF10609 NUBPL iron-transfer P-loop NTPase CNQ55_RS09830 PF10836 Protein of unknown function (DUF2574) CNQ55_RS09840 PF00419 Fimbrial protein CNQ55_RS09845 PF02753 Pili assembly chaperone PapD, C-terminal domain CNQ55_RS09845 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CNQ55_RS09850 PF13954 PapC N-terminal domain CNQ55_RS09850 PF00577 Outer membrane usher protein CNQ55_RS09850 PF13953 PapC C-terminal domain CNQ55_RS09855 PF00419 Fimbrial protein CNQ55_RS09860 PF11776 Nickel/cobalt transporter regulator CNQ55_RS09865 PF03824 High-affinity nickel-transport protein CNQ55_RS09870 PF02583 Metal-sensitive transcriptional repressor CNQ55_RS09875 PF02110 Hydroxyethylthiazole kinase family CNQ55_RS09880 PF08543 Phosphomethylpyrimidine kinase CNQ55_RS09885 PF01183 Glycosyl hydrolases family 25 CNQ55_RS09890 PF07702 UTRA domain CNQ55_RS09890 PF00392 Bacterial regulatory proteins, gntR family CNQ55_RS09895 PF00294 pfkB family carbohydrate kinase CNQ55_RS09900 PF03747 ADP-ribosylglycohydrolase CNQ55_RS09905 PF03825 Nucleoside H+ symporter CNQ55_RS09910 PF01791 DeoC/LacD family aldolase CNQ55_RS09920 PF01116 Fructose-bisphosphate aldolase class-II CNQ55_RS09925 PF08013 Tagatose 6 phosphate kinase CNQ55_RS09930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CNQ55_RS09935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CNQ55_RS09940 PF03611 PTS system sugar-specific permease component CNQ55_RS09950 PF08220 DeoR-like helix-turn-helix domain CNQ55_RS09955 PF00781 Diacylglycerol kinase catalytic domain CNQ55_RS09965 PF02899 Phage integrase, N-terminal SAM-like domain CNQ55_RS09965 PF00589 Phage integrase family CNQ55_RS10005 PF05840 Bacteriophage replication gene A protein (GPA) CNQ55_RS10115 PF03335 Phage tail fibre repeat CNQ55_RS10115 PF07484 Phage Tail Collar Domain CNQ55_RS10115 PF08400 Prophage tail fibre N-terminal CNQ55_RS10175 PF04606 Ogr/Delta-like zinc finger CNQ55_RS10180 PF01136 Peptidase family U32 CNQ55_RS10180 PF16325 Peptidase family U32 C-terminal domain CNQ55_RS10210 PF07411 Domain of unknown function (DUF1508) CNQ55_RS10215 PF00486 Transcriptional regulatory protein, C terminal CNQ55_RS10215 PF00072 Response regulator receiver domain CNQ55_RS10220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS10220 PF00672 HAMP domain CNQ55_RS10220 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS10225 PF07690 Major Facilitator Superfamily CNQ55_RS10230 PF00873 AcrB/AcrD/AcrF family CNQ55_RS10235 PF00873 AcrB/AcrD/AcrF family CNQ55_RS10240 PF13533 Biotin-lipoyl like CNQ55_RS10245 PF00092 von Willebrand factor type A domain CNQ55_RS10260 PF00012 Hsp70 protein CNQ55_RS10265 PF06029 AlkA N-terminal domain CNQ55_RS10265 PF00730 HhH-GPD superfamily base excision DNA repair protein CNQ55_RS10270 PF00563 EAL domain CNQ55_RS10270 PF05231 MASE1 CNQ55_RS10270 PF08448 PAS fold CNQ55_RS10270 PF00990 Diguanylate cyclase, GGDEF domain CNQ55_RS10270 PF13426 PAS domain CNQ55_RS10270 PF08447 PAS fold CNQ55_RS10275 PF00485 Phosphoribulokinase / Uridine kinase family CNQ55_RS10280 PF00692 dUTPase CNQ55_RS10285 PF05170 AsmA family CNQ55_RS10290 PF03471 Transporter associated domain CNQ55_RS10290 PF03741 Integral membrane protein TerC family CNQ55_RS10290 PF00571 CBS domain CNQ55_RS10295 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CNQ55_RS10295 PF02563 Polysaccharide biosynthesis/export protein CNQ55_RS10295 PF10531 SLBB domain CNQ55_RS10300 PF01451 Low molecular weight phosphotyrosine protein phosphatase CNQ55_RS10305 PF13807 G-rich domain on putative tyrosine kinase CNQ55_RS10305 PF02706 Chain length determinant protein CNQ55_RS10305 PF13614 AAA domain CNQ55_RS10310 PF00535 Glycosyl transferase family 2 CNQ55_RS10315 PF00132 Bacterial transferase hexapeptide (six repeats) CNQ55_RS10320 PF00534 Glycosyl transferases group 1 CNQ55_RS10320 PF13439 Glycosyltransferase Family 4 CNQ55_RS10330 PF00535 Glycosyl transferase family 2 CNQ55_RS10335 PF00132 Bacterial transferase hexapeptide (six repeats) CNQ55_RS10340 PF16363 GDP-mannose 4,6 dehydratase CNQ55_RS10345 PF01370 NAD dependent epimerase/dehydratase family CNQ55_RS10350 PF00293 NUDIX domain CNQ55_RS10355 PF13579 Glycosyl transferase 4-like domain CNQ55_RS10355 PF00534 Glycosyl transferases group 1 CNQ55_RS10360 PF00483 Nucleotidyl transferase CNQ55_RS10360 PF01050 Mannose-6-phosphate isomerase CNQ55_RS10365 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CNQ55_RS10365 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CNQ55_RS10365 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CNQ55_RS10365 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CNQ55_RS10370 PF02397 Bacterial sugar transferase CNQ55_RS10380 PF04230 Polysaccharide pyruvyl transferase CNQ55_RS10385 PF13439 Glycosyltransferase Family 4 CNQ55_RS10385 PF00534 Glycosyl transferases group 1 CNQ55_RS10395 PF00483 Nucleotidyl transferase CNQ55_RS10415 PF00535 Glycosyl transferase family 2 CNQ55_RS10420 PF13439 Glycosyltransferase Family 4 CNQ55_RS10420 PF00534 Glycosyl transferases group 1 CNQ55_RS10430 PF01370 NAD dependent epimerase/dehydratase family CNQ55_RS10440 PF00483 Nucleotidyl transferase CNQ55_RS10440 PF01050 Mannose-6-phosphate isomerase CNQ55_RS10445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CNQ55_RS10445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CNQ55_RS10445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CNQ55_RS10445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CNQ55_RS10450 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CNQ55_RS10450 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CNQ55_RS10455 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CNQ55_RS10455 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CNQ55_RS10455 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CNQ55_RS10460 PF02706 Chain length determinant protein CNQ55_RS10465 PF01502 Phosphoribosyl-AMP cyclohydrolase CNQ55_RS10465 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CNQ55_RS10470 PF00977 Histidine biosynthesis protein CNQ55_RS10475 PF00977 Histidine biosynthesis protein CNQ55_RS10480 PF00117 Glutamine amidotransferase class-I CNQ55_RS10485 PF00475 Imidazoleglycerol-phosphate dehydratase CNQ55_RS10490 PF00155 Aminotransferase class I and II CNQ55_RS10495 PF00815 Histidinol dehydrogenase CNQ55_RS10500 PF01634 ATP phosphoribosyltransferase CNQ55_RS10500 PF08029 HisG, C-terminal domain CNQ55_RS10515 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CNQ55_RS10520 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system CNQ55_RS10525 PF01370 NAD dependent epimerase/dehydratase family CNQ55_RS10530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS10530 PF03466 LysR substrate binding domain CNQ55_RS10535 PF13520 Amino acid permease CNQ55_RS10540 PF08411 Exonuclease C-terminal CNQ55_RS10540 PF00929 Exonuclease CNQ55_RS10545 PF07943 Penicillin-binding protein 5, C-terminal domain CNQ55_RS10545 PF00768 D-alanyl-D-alanine carboxypeptidase CNQ55_RS10550 PF06445 GyrI-like small molecule binding domain CNQ55_RS10555 PF04632 Fusaric acid resistance protein family CNQ55_RS10560 PF04363 Protein of unknown function (DUF496) CNQ55_RS10565 PF10662 Ethanolamine utilisation - propanediol utilisation CNQ55_RS10580 PF06755 CbtA_toxin of type IV toxin-antitoxin system CNQ55_RS10585 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A CNQ55_RS10590 PF06174 Protein of unknown function (DUF987) CNQ55_RS10595 PF04002 RadC-like JAB domain CNQ55_RS10600 PF03230 Antirestriction protein CNQ55_RS10605 PF06067 Domain of unknown function (DUF932) CNQ55_RS10630 PF13990 YjcZ-like protein CNQ55_RS10635 PF00350 Dynamin family CNQ55_RS10645 PF00593 TonB dependent receptor CNQ55_RS10645 PF07715 TonB-dependent Receptor Plug Domain CNQ55_RS10655 PF01032 FecCD transport family CNQ55_RS10660 PF00005 ABC transporter CNQ55_RS10695 PF00665 Integrase core domain CNQ55_RS10700 PF00665 Integrase core domain CNQ55_RS10700 PF02796 Helix-turn-helix domain of resolvase CNQ55_RS10705 PF01695 IstB-like ATP binding protein CNQ55_RS10730 PF02371 Transposase IS116/IS110/IS902 family CNQ55_RS10730 PF01548 Transposase CNQ55_RS10780 PF02126 Phosphotriesterase family CNQ55_RS10795 PF00294 pfkB family carbohydrate kinase CNQ55_RS10810 PF00132 Bacterial transferase hexapeptide (six repeats) CNQ55_RS10815 PF00535 Glycosyl transferase family 2 CNQ55_RS10820 PF02585 GlcNAc-PI de-N-acetylase CNQ55_RS10825 PF11922 Domain of unknown function (DUF3440) CNQ55_RS10825 PF01507 Phosphoadenosine phosphosulfate reductase family CNQ55_RS10830 PF02195 ParB-like nuclease domain CNQ55_RS10835 PF07715 TonB-dependent Receptor Plug Domain CNQ55_RS10860 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CNQ55_RS10865 PF02654 Cobalamin-5-phosphate synthase CNQ55_RS10870 PF02277 Phosphoribosyltransferase CNQ55_RS10875 PF03734 L,D-transpeptidase catalytic domain CNQ55_RS10875 PF17969 L,D-transpeptidase C-terminal domain CNQ55_RS10890 PF00665 Integrase core domain CNQ55_RS10890 PF13333 Integrase core domain CNQ55_RS10890 PF13276 HTH-like domain CNQ55_RS10900 PF01648 4'-phosphopantetheinyl transferase superfamily CNQ55_RS10905 PF00196 Bacterial regulatory proteins, luxR family CNQ55_RS10905 PF00072 Response regulator receiver domain CNQ55_RS10915 PF00698 Acyl transferase domain CNQ55_RS10915 PF00109 Beta-ketoacyl synthase, N-terminal domain CNQ55_RS10915 PF00668 Condensation domain CNQ55_RS10915 PF16197 Ketoacyl-synthetase C-terminal extension CNQ55_RS10915 PF02801 Beta-ketoacyl synthase, C-terminal domain CNQ55_RS10915 PF00550 Phosphopantetheine attachment site CNQ55_RS10920 PF00550 Phosphopantetheine attachment site CNQ55_RS10920 PF00698 Acyl transferase domain CNQ55_RS10920 PF00109 Beta-ketoacyl synthase, N-terminal domain CNQ55_RS10920 PF00668 Condensation domain CNQ55_RS10920 PF16197 Ketoacyl-synthetase C-terminal extension CNQ55_RS10920 PF02801 Beta-ketoacyl synthase, C-terminal domain CNQ55_RS10925 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CNQ55_RS10925 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CNQ55_RS10930 PF00550 Phosphopantetheine attachment site CNQ55_RS10935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CNQ55_RS10935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CNQ55_RS10935 PF02770 Acyl-CoA dehydrogenase, middle domain CNQ55_RS10940 PF00698 Acyl transferase domain CNQ55_RS10945 PF13193 AMP-binding enzyme C-terminal domain CNQ55_RS10945 PF00501 AMP-binding enzyme CNQ55_RS10945 PF00668 Condensation domain CNQ55_RS10945 PF00550 Phosphopantetheine attachment site CNQ55_RS10950 PF00550 Phosphopantetheine attachment site CNQ55_RS10950 PF00698 Acyl transferase domain CNQ55_RS10950 PF00109 Beta-ketoacyl synthase, N-terminal domain CNQ55_RS10950 PF16197 Ketoacyl-synthetase C-terminal extension CNQ55_RS10950 PF00668 Condensation domain CNQ55_RS10950 PF02801 Beta-ketoacyl synthase, C-terminal domain CNQ55_RS10955 PF00550 Phosphopantetheine attachment site CNQ55_RS10955 PF00668 Condensation domain CNQ55_RS10955 PF13193 AMP-binding enzyme C-terminal domain CNQ55_RS10955 PF00501 AMP-binding enzyme CNQ55_RS10960 PF00668 Condensation domain CNQ55_RS10960 PF13193 AMP-binding enzyme C-terminal domain CNQ55_RS10960 PF00550 Phosphopantetheine attachment site CNQ55_RS10960 PF00501 AMP-binding enzyme CNQ55_RS10960 PF13193 AMP-binding enzyme C-terminal domain CNQ55_RS10960 PF00501 AMP-binding enzyme CNQ55_RS10960 PF00668 Condensation domain CNQ55_RS10960 PF00550 Phosphopantetheine attachment site CNQ55_RS10965 PF01425 Amidase CNQ55_RS10975 PF00501 AMP-binding enzyme CNQ55_RS10975 PF13193 AMP-binding enzyme C-terminal domain CNQ55_RS10975 PF00668 Condensation domain CNQ55_RS10975 PF00550 Phosphopantetheine attachment site CNQ55_RS10980 PF02801 Beta-ketoacyl synthase, C-terminal domain CNQ55_RS10980 PF00109 Beta-ketoacyl synthase, N-terminal domain CNQ55_RS10980 PF00550 Phosphopantetheine attachment site CNQ55_RS10980 PF00698 Acyl transferase domain CNQ55_RS10980 PF00668 Condensation domain CNQ55_RS10980 PF16197 Ketoacyl-synthetase C-terminal extension CNQ55_RS10985 PF00144 Beta-lactamase CNQ55_RS10990 PF00975 Thioesterase domain CNQ55_RS11005 PF00589 Phage integrase family CNQ55_RS11005 PF13356 Arm DNA-binding domain CNQ55_RS11015 PF01554 MatE CNQ55_RS11025 PF03466 LysR substrate binding domain CNQ55_RS11025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS11030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS11030 PF03466 LysR substrate binding domain CNQ55_RS11045 PF01709 Transcriptional regulator CNQ55_RS11050 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CNQ55_RS11050 PF01048 Phosphorylase superfamily CNQ55_RS11055 PF07690 Major Facilitator Superfamily CNQ55_RS11055 PF00083 Sugar (and other) transporter CNQ55_RS11070 PF11924 Inverse autotransporter, beta-domain CNQ55_RS11070 PF02369 Bacterial Ig-like domain (group 1) CNQ55_RS11070 PF09134 Invasin, domain 3 CNQ55_RS11075 PF09134 Invasin, domain 3 CNQ55_RS11075 PF02369 Bacterial Ig-like domain (group 1) CNQ55_RS11075 PF11924 Inverse autotransporter, beta-domain CNQ55_RS11080 PF09134 Invasin, domain 3 CNQ55_RS11080 PF11924 Inverse autotransporter, beta-domain CNQ55_RS11080 PF02369 Bacterial Ig-like domain (group 1) CNQ55_RS11085 PF00593 TonB dependent receptor CNQ55_RS11085 PF07715 TonB-dependent Receptor Plug Domain CNQ55_RS11090 PF13193 AMP-binding enzyme C-terminal domain CNQ55_RS11090 PF00501 AMP-binding enzyme CNQ55_RS11095 PF00975 Thioesterase domain CNQ55_RS11110 PF00501 AMP-binding enzyme CNQ55_RS11110 PF00668 Condensation domain CNQ55_RS11110 PF08242 Methyltransferase domain CNQ55_RS11110 PF00550 Phosphopantetheine attachment site CNQ55_RS11120 PF00005 ABC transporter CNQ55_RS11120 PF00664 ABC transporter transmembrane region CNQ55_RS11120 PF08021 Siderophore-interacting FAD-binding domain CNQ55_RS11120 PF04954 Siderophore-interacting protein CNQ55_RS11125 PF00005 ABC transporter CNQ55_RS11125 PF00664 ABC transporter transmembrane region CNQ55_RS11130 PF07690 Major Facilitator Superfamily CNQ55_RS11135 PF00425 chorismate binding enzyme CNQ55_RS11140 PF13356 Arm DNA-binding domain CNQ55_RS11140 PF00589 Phage integrase family CNQ55_RS11150 PF06167 Glucose-regulated metallo-peptidase M90 CNQ55_RS11165 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CNQ55_RS11170 PF01794 Ferric reductase like transmembrane component CNQ55_RS11175 PF00174 Oxidoreductase molybdopterin binding domain CNQ55_RS11180 PF00576 HIUase/Transthyretin family CNQ55_RS11185 PF00486 Transcriptional regulatory protein, C terminal CNQ55_RS11185 PF00072 Response regulator receiver domain CNQ55_RS11190 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS11190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS11205 PF00267 Gram-negative porin CNQ55_RS11215 PF01966 HD domain CNQ55_RS11220 PF18284 DNA methylase N-terminal domain CNQ55_RS11220 PF00145 C-5 cytosine-specific DNA methylase CNQ55_RS11225 PF03852 DNA mismatch endonuclease Vsr CNQ55_RS11230 PF00892 EamA-like transporter family CNQ55_RS11235 PF05661 Protein of unknown function (DUF808) CNQ55_RS11240 PF09926 Uncharacterized small protein (DUF2158) CNQ55_RS11250 PF00990 Diguanylate cyclase, GGDEF domain CNQ55_RS11250 PF17151 Periplasmic sensor domain CNQ55_RS11260 PF10733 Protein of unknown function (DUF2525) CNQ55_RS11270 PF10781 Dextransucrase DSRB CNQ55_RS11275 PF00196 Bacterial regulatory proteins, luxR family CNQ55_RS11280 PF01311 Bacterial export proteins, family 1 CNQ55_RS11285 PF01313 Bacterial export proteins, family 3 CNQ55_RS11290 PF00813 FliP family CNQ55_RS11295 PF04347 Flagellar biosynthesis protein, FliO CNQ55_RS11300 PF16973 Flagellar motor switch protein FliN N-terminal CNQ55_RS11300 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CNQ55_RS11305 PF02154 Flagellar motor switch protein FliM CNQ55_RS11305 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CNQ55_RS11310 PF03748 Flagellar basal body-associated protein FliL CNQ55_RS11315 PF02120 Flagellar hook-length control protein FliK CNQ55_RS11320 PF02050 Flagellar FliJ protein CNQ55_RS11325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CNQ55_RS11325 PF18269 T3SS EscN ATPase C-terminal domain CNQ55_RS11330 PF02108 Flagellar assembly protein FliH CNQ55_RS11335 PF01706 FliG C-terminal domain CNQ55_RS11335 PF14842 FliG N-terminal domain CNQ55_RS11335 PF14841 FliG middle domain CNQ55_RS11340 PF08345 Flagellar M-ring protein C-terminal CNQ55_RS11340 PF01514 Secretory protein of YscJ/FliF family CNQ55_RS11345 PF02049 Flagellar hook-basal body complex protein FliE CNQ55_RS11360 PF00893 Small Multidrug Resistance protein CNQ55_RS11365 PF01161 Phosphatidylethanolamine-binding protein CNQ55_RS11370 PF12833 Helix-turn-helix domain CNQ55_RS11380 PF00267 Gram-negative porin CNQ55_RS11390 PF02586 SOS response associated peptidase (SRAP) CNQ55_RS11395 PF01206 Sulfurtransferase TusA CNQ55_RS11400 PF04143 Sulphur transport CNQ55_RS11410 PF13987 YedD-like protein CNQ55_RS11415 PF02806 Alpha amylase, C-terminal all-beta domain CNQ55_RS11415 PF00128 Alpha amylase, catalytic domain CNQ55_RS11420 PF05400 Flagellar protein FliT CNQ55_RS11425 PF02561 Flagellar protein FliS CNQ55_RS11430 PF02465 Flagellar hook-associated protein 2 N-terminus CNQ55_RS11430 PF07195 Flagellar hook-associated protein 2 C-terminus CNQ55_RS11440 PF00669 Bacterial flagellin N-terminal helical region CNQ55_RS11440 PF12445 Flagellin protein CNQ55_RS11440 PF00700 Bacterial flagellin C-terminal helical region CNQ55_RS11445 PF04542 Sigma-70 region 2 CNQ55_RS11445 PF04539 Sigma-70 region 3 CNQ55_RS11445 PF04545 Sigma-70, region 4 CNQ55_RS11450 PF02899 Phage integrase, N-terminal SAM-like domain CNQ55_RS11455 PF00497 Bacterial extracellular solute-binding proteins, family 3 CNQ55_RS11460 PF00291 Pyridoxal-phosphate dependent enzyme CNQ55_RS11465 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS11470 PF00005 ABC transporter CNQ55_RS11475 PF00196 Bacterial regulatory proteins, luxR family CNQ55_RS11475 PF03472 Autoinducer binding domain CNQ55_RS11480 PF10769 Protein of unknown function (DUF2594) CNQ55_RS11485 PF00196 Bacterial regulatory proteins, luxR family CNQ55_RS11485 PF00072 Response regulator receiver domain CNQ55_RS11490 PF01541 GIY-YIG catalytic domain CNQ55_RS11490 PF08459 UvrC Helix-hairpin-helix N-terminal CNQ55_RS11490 PF02151 UvrB/uvrC motif CNQ55_RS11495 PF01066 CDP-alcohol phosphatidyltransferase CNQ55_RS11515 PF03695 Uncharacterised protein family (UPF0149) CNQ55_RS11515 PF02810 SEC-C motif CNQ55_RS11520 PF03222 Tryptophan/tyrosine permease family CNQ55_RS11525 PF10678 Protein of unknown function (DUF2492) CNQ55_RS11530 PF00210 Ferritin-like domain CNQ55_RS11535 PF13992 YecR-like lipoprotein CNQ55_RS11550 PF10964 Protein of unknown function (DUF2766) CNQ55_RS11555 PF00210 Ferritin-like domain CNQ55_RS11565 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CNQ55_RS11570 PF00005 ABC transporter CNQ55_RS11575 PF02653 Branched-chain amino acid transport system / permease component CNQ55_RS11580 PF02358 Trehalose-phosphatase CNQ55_RS11585 PF00982 Glycosyltransferase family 20 CNQ55_RS11590 PF00582 Universal stress protein family CNQ55_RS11595 PF05247 Flagellar transcriptional activator (FlhD) CNQ55_RS11600 PF05280 Flagellar transcriptional activator (FlhC) CNQ55_RS11605 PF01618 MotA/TolQ/ExbB proton channel family CNQ55_RS11610 PF00691 OmpA family CNQ55_RS11610 PF13677 Membrane MotB of proton-channel complex MotA/MotB CNQ55_RS11615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS11615 PF01627 Hpt domain CNQ55_RS11615 PF09078 CheY binding CNQ55_RS11615 PF01584 CheW-like domain CNQ55_RS11615 PF02895 Signal transducing histidine kinase, homodimeric domain CNQ55_RS11620 PF01584 CheW-like domain CNQ55_RS11625 PF02203 Tar ligand binding domain homologue CNQ55_RS11625 PF00672 HAMP domain CNQ55_RS11625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CNQ55_RS11635 PF03705 CheR methyltransferase, all-alpha domain CNQ55_RS11635 PF01739 CheR methyltransferase, SAM binding domain CNQ55_RS11640 PF01339 CheB methylesterase CNQ55_RS11640 PF00072 Response regulator receiver domain CNQ55_RS11645 PF00072 Response regulator receiver domain CNQ55_RS11650 PF04344 Chemotaxis phosphatase, CheZ CNQ55_RS11655 PF01312 FlhB HrpN YscU SpaS Family CNQ55_RS11660 PF00771 FHIPEP family CNQ55_RS11665 PF06366 Flagellar protein FlhE CNQ55_RS11670 PF05746 DALR anticodon binding domain CNQ55_RS11670 PF03485 Arginyl tRNA synthetase N terminal domain CNQ55_RS11670 PF00750 tRNA synthetases class I (R) CNQ55_RS11680 PF06185 YecM protein CNQ55_RS11685 PF03932 CutC family CNQ55_RS11690 PF03264 NapC/NirT cytochrome c family, N-terminal region CNQ55_RS11695 PF18364 Molybdopterin oxidoreductase N-terminal domain CNQ55_RS11695 PF01568 Molydopterin dinucleotide binding domain CNQ55_RS11695 PF00384 Molybdopterin oxidoreductase CNQ55_RS11700 PF08003 Protein of unknown function (DUF1698) CNQ55_RS11705 PF13649 Methyltransferase domain CNQ55_RS11710 PF01124 MAPEG family CNQ55_RS11715 PF01904 Protein of unknown function DUF72 CNQ55_RS11720 PF00857 Isochorismatase family CNQ55_RS11725 PF02938 GAD domain CNQ55_RS11725 PF00152 tRNA synthetases class II (D, K and N) CNQ55_RS11725 PF01336 OB-fold nucleic acid binding domain CNQ55_RS11730 PF00293 NUDIX domain CNQ55_RS11735 PF01709 Transcriptional regulator CNQ55_RS11740 PF02075 Crossover junction endodeoxyribonuclease RuvC CNQ55_RS11745 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CNQ55_RS11755 PF07499 RuvA, C-terminal domain CNQ55_RS11755 PF01330 RuvA N terminal domain CNQ55_RS11760 PF05496 Holliday junction DNA helicase RuvB P-loop domain CNQ55_RS11760 PF17864 RuvB AAA lid domain CNQ55_RS11760 PF05491 RuvB C-terminal winged helix domain CNQ55_RS11765 PF00950 ABC 3 transport family CNQ55_RS11770 PF00005 ABC transporter CNQ55_RS11775 PF01297 Zinc-uptake complex component A periplasmic CNQ55_RS11780 PF08525 Opacity-associated protein A N-terminal motif CNQ55_RS11780 PF01476 LysM domain CNQ55_RS11780 PF01551 Peptidase family M23 CNQ55_RS11785 PF03279 Bacterial lipid A biosynthesis acyltransferase CNQ55_RS11790 PF00224 Pyruvate kinase, barrel domain CNQ55_RS11790 PF02887 Pyruvate kinase, alpha/beta domain CNQ55_RS11795 PF01380 SIS domain CNQ55_RS11795 PF01418 Helix-turn-helix domain, rpiR family CNQ55_RS11800 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CNQ55_RS11800 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CNQ55_RS11805 PF00920 Dehydratase family CNQ55_RS11810 PF01081 KDPG and KHG aldolase CNQ55_RS11815 PF02222 ATP-grasp domain CNQ55_RS11820 PF07130 YebG protein CNQ55_RS11825 PF13995 YebF-like protein CNQ55_RS11830 PF04391 Protein of unknown function (DUF533) CNQ55_RS11835 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CNQ55_RS11835 PF00326 Prolyl oligopeptidase family CNQ55_RS11840 PF00929 Exonuclease CNQ55_RS11845 PF00795 Carbon-nitrogen hydrolase CNQ55_RS11850 PF06440 DNA polymerase III, theta subunit CNQ55_RS11855 PF04234 CopC domain CNQ55_RS11860 PF05425 Copper resistance protein D CNQ55_RS11865 PF10709 Protein of unknown function (DUF2511) CNQ55_RS11870 PF00149 Calcineurin-like phosphoesterase CNQ55_RS11875 PF07358 Protein of unknown function (DUF1482) CNQ55_RS11880 PF07351 Protein of unknown function (DUF1480) CNQ55_RS11885 PF01189 16S rRNA methyltransferase RsmB/F CNQ55_RS11885 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CNQ55_RS11885 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CNQ55_RS11890 PF02470 MlaD protein CNQ55_RS11895 PF04403 Paraquat-inducible protein A CNQ55_RS11900 PF13185 GAF domain CNQ55_RS11905 PF04352 ProQ/FINO family CNQ55_RS11905 PF17516 ProQ C-terminal domain CNQ55_RS11910 PF17804 Tail specific protease N-terminal domain CNQ55_RS11910 PF00595 PDZ domain CNQ55_RS11910 PF03572 Peptidase family S41 CNQ55_RS11910 PF11818 C-terminal domain of tail specific protease (DUF3340) CNQ55_RS11915 PF01435 Peptidase family M48 CNQ55_RS11920 PF07690 Major Facilitator Superfamily CNQ55_RS11925 PF09339 IclR helix-turn-helix domain CNQ55_RS11925 PF01614 Bacterial transcriptional regulator CNQ55_RS11930 PF13996 YobH-like protein CNQ55_RS11935 PF13998 MgrB protein CNQ55_RS11940 PF13974 YebO-like protein CNQ55_RS11950 PF10736 Protein of unknown function (DUF2627) CNQ55_RS11955 PF00313 'Cold-shock' DNA-binding domain CNQ55_RS11960 PF13847 Methyltransferase domain CNQ55_RS11965 PF02659 Putative manganese efflux pump CNQ55_RS11975 PF06173 Protein of unknown function (DUF986) CNQ55_RS11980 PF03613 PTS system mannose/fructose/sorbose family IID component CNQ55_RS11985 PF03609 PTS system sorbose-specific iic component CNQ55_RS11990 PF03610 PTS system fructose IIA component CNQ55_RS11990 PF03830 PTS system sorbose subfamily IIB component CNQ55_RS12005 PF03741 Integral membrane protein TerC family CNQ55_RS12005 PF03471 Transporter associated domain CNQ55_RS12010 PF00563 EAL domain CNQ55_RS12010 PF12792 CSS motif domain associated with EAL CNQ55_RS12015 PF03315 Serine dehydratase beta chain CNQ55_RS12015 PF03313 Serine dehydratase alpha chain CNQ55_RS12020 PF00293 NUDIX domain CNQ55_RS12025 PF04715 Anthranilate synthase component I, N terminal region CNQ55_RS12025 PF00425 chorismate binding enzyme CNQ55_RS12030 PF03701 Uncharacterised protein family (UPF0181) CNQ55_RS12035 PF08986 Domain of unknown function (DUF1889) CNQ55_RS12040 PF01042 Endoribonuclease L-PSP CNQ55_RS12045 PF13307 Helicase C-terminal domain CNQ55_RS12045 PF04851 Type III restriction enzyme, res subunit CNQ55_RS12050 PF00814 Glycoprotease family CNQ55_RS12055 PF03843 Outer membrane lipoprotein Slp family CNQ55_RS12060 PF13193 AMP-binding enzyme C-terminal domain CNQ55_RS12060 PF00501 AMP-binding enzyme CNQ55_RS12065 PF00570 HRDC domain CNQ55_RS12065 PF01612 3'-5' exonuclease CNQ55_RS12070 PF03466 LysR substrate binding domain CNQ55_RS12070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS12075 PF01810 LysE type translocator CNQ55_RS12080 PF09313 Domain of unknown function (DUF1971) CNQ55_RS12085 PF08956 Domain of unknown function (DUF1869) CNQ55_RS12090 PF04226 Transglycosylase associated protein CNQ55_RS12105 PF13185 GAF domain CNQ55_RS12105 PF00990 Diguanylate cyclase, GGDEF domain CNQ55_RS12110 PF03891 Domain of unknown function (DUF333) CNQ55_RS12115 PF04343 Protein of unknown function, DUF488 CNQ55_RS12120 PF07690 Major Facilitator Superfamily CNQ55_RS12125 PF02311 AraC-like ligand binding domain CNQ55_RS12125 PF12833 Helix-turn-helix domain CNQ55_RS12130 PF04284 Protein of unknown function (DUF441) CNQ55_RS12140 PF04073 Aminoacyl-tRNA editing domain CNQ55_RS12145 PF17155 Gammaproteobacterial periplasmic sensor domain CNQ55_RS12145 PF00990 Diguanylate cyclase, GGDEF domain CNQ55_RS12150 PF00990 Diguanylate cyclase, GGDEF domain CNQ55_RS12150 PF17158 Membrane-associated sensor, integral membrane domain CNQ55_RS12155 PF04285 Protein of unknown function (DUF444) CNQ55_RS12160 PF08298 PrkA AAA domain CNQ55_RS12160 PF06798 PrkA serine protein kinase C-terminal domain CNQ55_RS12165 PF06629 MltA-interacting protein MipA CNQ55_RS12170 PF00248 Aldo/keto reductase family CNQ55_RS12175 PF01263 Aldose 1-epimerase CNQ55_RS12180 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CNQ55_RS12180 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CNQ55_RS12185 PF01641 SelR domain CNQ55_RS12190 PF07023 Protein of unknown function (DUF1315) CNQ55_RS12195 PF00107 Zinc-binding dehydrogenase CNQ55_RS12195 PF08240 Alcohol dehydrogenase GroES-like domain CNQ55_RS12200 PF00083 Sugar (and other) transporter CNQ55_RS12205 PF00107 Zinc-binding dehydrogenase CNQ55_RS12205 PF08240 Alcohol dehydrogenase GroES-like domain CNQ55_RS12210 PF01116 Fructose-bisphosphate aldolase class-II CNQ55_RS12215 PF00294 pfkB family carbohydrate kinase CNQ55_RS12220 PF00248 Aldo/keto reductase family CNQ55_RS12225 PF08220 DeoR-like helix-turn-helix domain CNQ55_RS12225 PF00455 DeoR C terminal sensor domain CNQ55_RS12230 PF00083 Sugar (and other) transporter CNQ55_RS12235 PF00857 Isochorismatase family CNQ55_RS12240 PF00710 Asparaginase, N-terminal CNQ55_RS12240 PF17763 Glutaminase/Asparaginase C-terminal domain CNQ55_RS12245 PF01343 Peptidase family S49 CNQ55_RS12255 PF00881 Nitroreductase family CNQ55_RS12265 PF00586 AIR synthase related protein, N-terminal domain CNQ55_RS12265 PF02769 AIR synthase related protein, C-terminal domain CNQ55_RS12270 PF01131 DNA topoisomerase CNQ55_RS12270 PF01751 Toprim domain CNQ55_RS12275 PF00012 Hsp70 protein CNQ55_RS12290 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CNQ55_RS12290 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CNQ55_RS12295 PF07383 Protein of unknown function (DUF1496) CNQ55_RS12300 PF00293 NUDIX domain CNQ55_RS12305 PF01066 CDP-alcohol phosphatidyltransferase CNQ55_RS12310 PF00581 Rhodanese-like domain CNQ55_RS12315 PF00005 ABC transporter CNQ55_RS12320 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS12325 PF13416 Bacterial extracellular solute-binding protein CNQ55_RS12330 PF02627 Carboxymuconolactone decarboxylase family CNQ55_RS12335 PF09335 SNARE associated Golgi protein CNQ55_RS12345 PF09335 SNARE associated Golgi protein CNQ55_RS12350 PF03372 Endonuclease/Exonuclease/phosphatase family CNQ55_RS12360 PF00202 Aminotransferase class-III CNQ55_RS12365 PF04958 Arginine N-succinyltransferase beta subunit CNQ55_RS12370 PF00171 Aldehyde dehydrogenase family CNQ55_RS12375 PF04996 Succinylarginine dihydrolase CNQ55_RS12380 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CNQ55_RS12385 PF07813 LTXXQ motif family protein CNQ55_RS12390 PF05962 HutD CNQ55_RS12400 PF02540 NAD synthase CNQ55_RS12405 PF04355 SmpA / OmlA family CNQ55_RS12415 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CNQ55_RS12420 PF02378 Phosphotransferase system, EIIC CNQ55_RS12425 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CNQ55_RS12430 PF12833 Helix-turn-helix domain CNQ55_RS12430 PF07883 Cupin domain CNQ55_RS12435 PF11975 Family 4 glycosyl hydrolase C-terminal domain CNQ55_RS12435 PF02056 Family 4 glycosyl hydrolase CNQ55_RS12440 PF04794 YdjC-like protein CNQ55_RS12445 PF00199 Catalase CNQ55_RS12445 PF18011 C-terminal domain found in long catalases CNQ55_RS12445 PF06628 Catalase-related immune-responsive CNQ55_RS12450 PF10729 Cell division activator CedA CNQ55_RS12455 PF00375 Sodium:dicarboxylate symporter family CNQ55_RS12460 PF04307 LexA-binding, inner membrane-associated putative hydrolase CNQ55_RS12465 PF13419 Haloacid dehalogenase-like hydrolase CNQ55_RS12470 PF14002 YniB-like protein CNQ55_RS12475 PF03881 Fructosamine kinase CNQ55_RS12480 PF11080 Endoribonuclease GhoS CNQ55_RS12485 PF00294 pfkB family carbohydrate kinase CNQ55_RS12490 PF04338 Protein of unknown function, DUF481 CNQ55_RS12505 PF03129 Anticodon binding domain CNQ55_RS12505 PF02824 TGS domain CNQ55_RS12505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CNQ55_RS12505 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CNQ55_RS12510 PF00707 Translation initiation factor IF-3, C-terminal domain CNQ55_RS12510 PF05198 Translation initiation factor IF-3, N-terminal domain CNQ55_RS12515 PF01632 Ribosomal protein L35 CNQ55_RS12520 PF00453 Ribosomal protein L20 CNQ55_RS12530 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CNQ55_RS12530 PF01409 tRNA synthetases class II core domain (F) CNQ55_RS12535 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CNQ55_RS12535 PF01588 Putative tRNA binding domain CNQ55_RS12535 PF03147 Ferredoxin-fold anticodon binding domain CNQ55_RS12535 PF03484 tRNA synthetase B5 domain CNQ55_RS12535 PF03483 B3/4 domain CNQ55_RS12540 PF00216 Bacterial DNA-binding protein CNQ55_RS12545 PF01032 FecCD transport family CNQ55_RS12550 PF00255 Glutathione peroxidase CNQ55_RS12555 PF00005 ABC transporter CNQ55_RS12560 PF00877 NlpC/P60 family CNQ55_RS12565 PF00563 EAL domain CNQ55_RS12570 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CNQ55_RS12575 PF10636 Hemin uptake protein hemP CNQ55_RS12580 PF00793 DAHP synthetase I family CNQ55_RS12585 PF03618 Kinase/pyrophosphorylase CNQ55_RS12595 PF00391 PEP-utilising enzyme, mobile domain CNQ55_RS12595 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CNQ55_RS12595 PF02896 PEP-utilising enzyme, TIM barrel domain CNQ55_RS12600 PF13193 AMP-binding enzyme C-terminal domain CNQ55_RS12600 PF00501 AMP-binding enzyme CNQ55_RS12610 PF01494 FAD binding domain CNQ55_RS12615 PF01012 Electron transfer flavoprotein domain CNQ55_RS12615 PF00766 Electron transfer flavoprotein FAD-binding domain CNQ55_RS12620 PF01012 Electron transfer flavoprotein domain CNQ55_RS12630 PF02311 AraC-like ligand binding domain CNQ55_RS12630 PF12833 Helix-turn-helix domain CNQ55_RS12635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CNQ55_RS12635 PF02770 Acyl-CoA dehydrogenase, middle domain CNQ55_RS12635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CNQ55_RS12640 PF01144 Coenzyme A transferase CNQ55_RS12645 PF01487 Type I 3-dehydroquinase CNQ55_RS12650 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CNQ55_RS12650 PF08501 Shikimate dehydrogenase substrate binding domain CNQ55_RS12655 PF07690 Major Facilitator Superfamily CNQ55_RS12660 PF07690 Major Facilitator Superfamily CNQ55_RS12665 PF08965 Domain of unknown function (DUF1870) CNQ55_RS12675 PF01594 AI-2E family transporter CNQ55_RS12680 PF13183 4Fe-4S dicluster domain CNQ55_RS12680 PF01565 FAD binding domain CNQ55_RS12680 PF02913 FAD linked oxidases, C-terminal domain CNQ55_RS12685 PF03061 Thioesterase superfamily CNQ55_RS12690 PF15930 Domain of unknown function CNQ55_RS12695 PF01521 Iron-sulphur cluster biosynthesis CNQ55_RS12700 PF01458 Uncharacterized protein family (UPF0051) CNQ55_RS12705 PF00005 ABC transporter CNQ55_RS12710 PF01458 Uncharacterized protein family (UPF0051) CNQ55_RS12715 PF00266 Aminotransferase class-V CNQ55_RS12720 PF02657 Fe-S metabolism associated domain CNQ55_RS12725 PF17969 L,D-transpeptidase C-terminal domain CNQ55_RS12725 PF01476 LysM domain CNQ55_RS12725 PF03734 L,D-transpeptidase catalytic domain CNQ55_RS12730 PF04728 Lipoprotein leucine-zipper CNQ55_RS12735 PF02887 Pyruvate kinase, alpha/beta domain CNQ55_RS12735 PF00224 Pyruvate kinase, barrel domain CNQ55_RS12740 PF10965 Protein of unknown function (DUF2767) CNQ55_RS12745 PF12800 4Fe-4S binding domain CNQ55_RS12745 PF13247 4Fe-4S dicluster domain CNQ55_RS12750 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain CNQ55_RS12750 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CNQ55_RS12760 PF13247 4Fe-4S dicluster domain CNQ55_RS12765 PF01292 Prokaryotic cytochrome b561 CNQ55_RS12775 PF13454 FAD-NAD(P)-binding CNQ55_RS12780 PF08803 Putative mono-oxygenase ydhR CNQ55_RS12795 PF03212 Pertactin CNQ55_RS12795 PF16168 Adhesin of bacterial autotransporter system, probable stalk CNQ55_RS12800 PF01554 MatE CNQ55_RS12805 PF00677 Lumazine binding domain CNQ55_RS12815 PF07690 Major Facilitator Superfamily CNQ55_RS12820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS12820 PF03466 LysR substrate binding domain CNQ55_RS12825 PF00356 Bacterial regulatory proteins, lacI family CNQ55_RS12840 PF07690 Major Facilitator Superfamily CNQ55_RS12845 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CNQ55_RS12845 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CNQ55_RS12850 PF00877 NlpC/P60 family CNQ55_RS12855 PF00462 Glutaredoxin CNQ55_RS12870 PF00929 Exonuclease CNQ55_RS12875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CNQ55_RS12880 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CNQ55_RS12885 PF00440 Bacterial regulatory proteins, tetR family CNQ55_RS12885 PF16925 Tetracyclin repressor-like, C-terminal domain CNQ55_RS12890 PF06945 Protein of unknown function (DUF1289) CNQ55_RS12895 PF00248 Aldo/keto reductase family CNQ55_RS12900 PF00080 Copper/zinc superoxide dismutase (SODC) CNQ55_RS12905 PF04632 Fusaric acid resistance protein family CNQ55_RS12910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CNQ55_RS12910 PF00529 HlyD membrane-fusion protein of T1SS CNQ55_RS12915 PF07869 Protein of unknown function (DUF1656) CNQ55_RS12920 PF01047 MarR family CNQ55_RS12925 PF05433 Glycine zipper 2TM domain CNQ55_RS12930 PF03702 Anhydro-N-acetylmuramic acid kinase CNQ55_RS12935 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CNQ55_RS12940 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CNQ55_RS12940 PF01243 Pyridoxamine 5'-phosphate oxidase CNQ55_RS12945 PF01479 S4 domain CNQ55_RS12945 PF00579 tRNA synthetases class I (W and Y) CNQ55_RS12950 PF08543 Phosphomethylpyrimidine kinase CNQ55_RS12955 PF00043 Glutathione S-transferase, C-terminal domain CNQ55_RS12955 PF02798 Glutathione S-transferase, N-terminal domain CNQ55_RS12960 PF00854 POT family CNQ55_RS12970 PF10576 Iron-sulfur binding domain of endonuclease III CNQ55_RS12970 PF00730 HhH-GPD superfamily base excision DNA repair protein CNQ55_RS12970 PF00633 Helix-hairpin-helix motif CNQ55_RS12975 PF02508 Rnf-Nqr subunit, membrane protein CNQ55_RS12980 PF04205 FMN-binding domain CNQ55_RS12985 PF03116 NQR2, RnfD, RnfE family CNQ55_RS12990 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CNQ55_RS12990 PF12838 4Fe-4S dicluster domain CNQ55_RS12990 PF13375 RnfC Barrel sandwich hybrid domain CNQ55_RS12990 PF10531 SLBB domain CNQ55_RS12995 PF04060 Putative Fe-S cluster CNQ55_RS13000 PF02508 Rnf-Nqr subunit, membrane protein CNQ55_RS13005 PF10754 Protein of unknown function (DUF2569) CNQ55_RS13010 PF05321 Haemolysin expression modulating protein CNQ55_RS13025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CNQ55_RS13025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CNQ55_RS13030 PF00962 Adenosine/AMP deaminase CNQ55_RS13035 PF00155 Aminotransferase class I and II CNQ55_RS13040 PF00367 phosphotransferase system, EIIB CNQ55_RS13040 PF02378 Phosphotransferase system, EIIC CNQ55_RS13045 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CNQ55_RS13045 PF00356 Bacterial regulatory proteins, lacI family CNQ55_RS13055 PF00440 Bacterial regulatory proteins, tetR family CNQ55_RS13060 PF02837 Glycosyl hydrolases family 2, sugar binding domain CNQ55_RS13060 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CNQ55_RS13060 PF00703 Glycosyl hydrolases family 2 CNQ55_RS13070 PF03573 outer membrane porin, OprD family CNQ55_RS13075 PF06097 Bacterial protein of unknown function (DUF945) CNQ55_RS13080 PF01238 Phosphomannose isomerase type I CNQ55_RS13085 PF05681 Fumarate hydratase (Fumerase) CNQ55_RS13085 PF05683 Fumarase C-terminus CNQ55_RS13090 PF10415 Fumarase C C-terminus CNQ55_RS13090 PF00206 Lyase CNQ55_RS13095 PF05472 DNA replication terminus site-binding protein (Ter protein) CNQ55_RS13100 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS13100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS13100 PF00672 HAMP domain CNQ55_RS13105 PF00486 Transcriptional regulatory protein, C terminal CNQ55_RS13105 PF00072 Response regulator receiver domain CNQ55_RS13110 PF06942 GlpM protein CNQ55_RS13120 PF13520 Amino acid permease CNQ55_RS13130 PF07338 Protein of unknown function (DUF1471) CNQ55_RS13135 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CNQ55_RS13135 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CNQ55_RS13135 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CNQ55_RS13140 PF02233 NAD(P) transhydrogenase beta subunit CNQ55_RS13145 PF01594 AI-2E family transporter CNQ55_RS13155 PF00893 Small Multidrug Resistance protein CNQ55_RS13160 PF00893 Small Multidrug Resistance protein CNQ55_RS13165 PF00089 Trypsin CNQ55_RS13185 PF07690 Major Facilitator Superfamily CNQ55_RS13190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS13190 PF03466 LysR substrate binding domain CNQ55_RS13195 PF00480 ROK family CNQ55_RS13205 PF00654 Voltage gated chloride channel CNQ55_RS13210 PF02613 Nitrate reductase delta subunit CNQ55_RS13215 PF04976 DMSO reductase anchor subunit (DmsC) CNQ55_RS13220 PF06649 Protein of unknown function (DUF1161) CNQ55_RS13225 PF06788 Uncharacterised protein family (UPF0257) CNQ55_RS13230 PF13302 Acetyltransferase (GNAT) domain CNQ55_RS13235 PF06932 Protein of unknown function (DUF1283) CNQ55_RS13240 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CNQ55_RS13250 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CNQ55_RS13250 PF13378 Enolase C-terminal domain-like CNQ55_RS13255 PF00107 Zinc-binding dehydrogenase CNQ55_RS13255 PF08240 Alcohol dehydrogenase GroES-like domain CNQ55_RS13260 PF00083 Sugar (and other) transporter CNQ55_RS13260 PF07690 Major Facilitator Superfamily CNQ55_RS13265 PF01232 Mannitol dehydrogenase Rossmann domain CNQ55_RS13265 PF08125 Mannitol dehydrogenase C-terminal domain CNQ55_RS13270 PF14001 YdfZ protein CNQ55_RS13275 PF07729 FCD domain CNQ55_RS13275 PF00392 Bacterial regulatory proteins, gntR family CNQ55_RS13280 PF00106 short chain dehydrogenase CNQ55_RS13290 PF01432 Peptidase family M3 CNQ55_RS13300 PF04076 Bacterial OB fold (BOF) protein CNQ55_RS13305 PF00990 Diguanylate cyclase, GGDEF domain CNQ55_RS13315 PF07690 Major Facilitator Superfamily CNQ55_RS13320 PF00892 EamA-like transporter family CNQ55_RS13325 PF00392 Bacterial regulatory proteins, gntR family CNQ55_RS13325 PF07702 UTRA domain CNQ55_RS13330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CNQ55_RS13335 PF02378 Phosphotransferase system, EIIC CNQ55_RS13340 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CNQ55_RS13345 PF11471 Maltoporin periplasmic N-terminal extension CNQ55_RS13345 PF02264 LamB porin CNQ55_RS13350 PF00232 Glycosyl hydrolase family 1 CNQ55_RS13355 PF13999 MarB protein CNQ55_RS13360 PF12833 Helix-turn-helix domain CNQ55_RS13365 PF01047 MarR family CNQ55_RS13370 PF01914 MarC family integral membrane protein CNQ55_RS13375 PF07690 Major Facilitator Superfamily CNQ55_RS13385 PF03466 LysR substrate binding domain CNQ55_RS13385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS13390 PF00171 Aldehyde dehydrogenase family CNQ55_RS13395 PF04960 Glutaminase CNQ55_RS13400 PF13811 Domain of unknown function (DUF4186) CNQ55_RS13410 PF00990 Diguanylate cyclase, GGDEF domain CNQ55_RS13420 PF08125 Mannitol dehydrogenase C-terminal domain CNQ55_RS13420 PF01232 Mannitol dehydrogenase Rossmann domain CNQ55_RS13430 PF01062 Bestrophin, RFP-TM, chloride channel CNQ55_RS13435 PF13649 Methyltransferase domain CNQ55_RS13440 PF01381 Helix-turn-helix CNQ55_RS13445 PF07804 HipA-like C-terminal domain CNQ55_RS13445 PF13657 HipA N-terminal domain CNQ55_RS13455 PF13953 PapC C-terminal domain CNQ55_RS13455 PF00577 Outer membrane usher protein CNQ55_RS13460 PF00419 Fimbrial protein CNQ55_RS13465 PF00419 Fimbrial protein CNQ55_RS13470 PF09160 FimH, mannose binding CNQ55_RS13475 PF00384 Molybdopterin oxidoreductase CNQ55_RS13480 PF17073 Two-component-system connector protein CNQ55_RS13485 PF12833 Helix-turn-helix domain CNQ55_RS13490 PF00884 Sulfatase CNQ55_RS13495 PF13186 Iron-sulfur cluster-binding domain CNQ55_RS13495 PF04055 Radical SAM superfamily CNQ55_RS13500 PF06472 ABC transporter transmembrane region 2 CNQ55_RS13500 PF00005 ABC transporter CNQ55_RS13505 PF07715 TonB-dependent Receptor Plug Domain CNQ55_RS13510 PF00675 Insulinase (Peptidase family M16) CNQ55_RS13510 PF05193 Peptidase M16 inactive domain CNQ55_RS13520 PF00282 Pyridoxal-dependent decarboxylase conserved domain CNQ55_RS13525 PF13520 Amino acid permease CNQ55_RS13530 PF02638 Glycosyl hydrolase-like 10 CNQ55_RS13535 PF00990 Diguanylate cyclase, GGDEF domain CNQ55_RS13535 PF00990 Diguanylate cyclase, GGDEF domain CNQ55_RS13540 PF00563 EAL domain CNQ55_RS13540 PF00990 Diguanylate cyclase, GGDEF domain CNQ55_RS13540 PF13426 PAS domain CNQ55_RS13545 PF02566 OsmC-like protein CNQ55_RS13555 PF10684 Putative biofilm-dependent modulation protein CNQ55_RS13560 PF08136 30S ribosomal protein subunit S22 family CNQ55_RS13565 PF03949 Malic enzyme, NAD binding domain CNQ55_RS13565 PF00390 Malic enzyme, N-terminal domain CNQ55_RS13570 PF08240 Alcohol dehydrogenase GroES-like domain CNQ55_RS13570 PF00107 Zinc-binding dehydrogenase CNQ55_RS13575 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB CNQ55_RS13580 PF01381 Helix-turn-helix CNQ55_RS13585 PF01292 Prokaryotic cytochrome b561 CNQ55_RS13590 PF09163 Formate dehydrogenase N, transmembrane CNQ55_RS13590 PF12800 4Fe-4S binding domain CNQ55_RS13590 PF13247 4Fe-4S dicluster domain CNQ55_RS13600 PF00892 EamA-like transporter family CNQ55_RS13605 PF07690 Major Facilitator Superfamily CNQ55_RS13610 PF00384 Molybdopterin oxidoreductase CNQ55_RS13610 PF01568 Molydopterin dinucleotide binding domain CNQ55_RS13610 PF14710 Respiratory nitrate reductase alpha N-terminal CNQ55_RS13615 PF14711 Respiratory nitrate reductase beta C-terminal CNQ55_RS13615 PF13247 4Fe-4S dicluster domain CNQ55_RS13620 PF02613 Nitrate reductase delta subunit CNQ55_RS13625 PF02665 Nitrate reductase gamma subunit CNQ55_RS13630 PF02567 Phenazine biosynthesis-like protein CNQ55_RS13635 PF00797 N-acetyltransferase CNQ55_RS13640 PF01613 Flavin reductase like domain CNQ55_RS13655 PF01609 Transposase DDE domain CNQ55_RS13655 PF13808 DDE_Tnp_1-associated CNQ55_RS13675 PF04717 Type VI secretion system, phage-baseplate injector CNQ55_RS13685 PF13417 Glutathione S-transferase, N-terminal domain CNQ55_RS13690 PF00324 Amino acid permease CNQ55_RS13710 PF00593 TonB dependent receptor CNQ55_RS13710 PF07715 TonB-dependent Receptor Plug Domain CNQ55_RS13715 PF07729 FCD domain CNQ55_RS13715 PF00392 Bacterial regulatory proteins, gntR family CNQ55_RS13730 PF00583 Acetyltransferase (GNAT) family CNQ55_RS13735 PF04657 Putative inner membrane exporter, YdcZ CNQ55_RS13740 PF10735 Protein of unknown function (DUF2526) CNQ55_RS13745 PF10753 Toxin GhoT_OrtT CNQ55_RS13760 PF00171 Aldehyde dehydrogenase family CNQ55_RS13765 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS13770 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS13775 PF00005 ABC transporter CNQ55_RS13775 PF08402 TOBE domain CNQ55_RS13780 PF13416 Bacterial extracellular solute-binding protein CNQ55_RS13785 PF00155 Aminotransferase class I and II CNQ55_RS13785 PF00392 Bacterial regulatory proteins, gntR family CNQ55_RS13795 PF10829 Protein of unknown function (DUF2554) CNQ55_RS13800 PF12392 Collagenase CNQ55_RS13800 PF01136 Peptidase family U32 CNQ55_RS13805 PF01381 Helix-turn-helix CNQ55_RS13805 PF07883 Cupin domain CNQ55_RS13810 PF03594 Benzoate membrane transport protein CNQ55_RS13815 PF11769 Protein of unknown function (DUF3313) CNQ55_RS13820 PF03848 Tellurite resistance protein TehB CNQ55_RS13825 PF03595 Voltage-dependent anion channel CNQ55_RS13830 PF18836 Beta solenoid repeat from YDCK CNQ55_RS13835 PF13302 Acetyltransferase (GNAT) domain CNQ55_RS13840 PF04325 Protein of unknown function (DUF465) CNQ55_RS13850 PF04349 Periplasmic glucan biosynthesis protein, MdoG CNQ55_RS13860 PF07063 Domain of unknown function (DUF1338) CNQ55_RS13865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS13865 PF03466 LysR substrate binding domain CNQ55_RS13875 PF01848 Hok/gef family CNQ55_RS13885 PF01292 Prokaryotic cytochrome b561 CNQ55_RS13890 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CNQ55_RS13890 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CNQ55_RS13895 PF00171 Aldehyde dehydrogenase family CNQ55_RS13900 PF02698 DUF218 domain CNQ55_RS13905 PF04408 Helicase associated domain (HA2) CNQ55_RS13905 PF00270 DEAD/DEAH box helicase CNQ55_RS13905 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CNQ55_RS13905 PF00271 Helicase conserved C-terminal domain CNQ55_RS13905 PF11898 Domain of unknown function (DUF3418) CNQ55_RS13910 PF02525 Flavodoxin-like fold CNQ55_RS13920 PF12146 Serine aminopeptidase, S33 CNQ55_RS13920 PF12147 Putative methyltransferase CNQ55_RS13930 PF01066 CDP-alcohol phosphatidyltransferase CNQ55_RS13935 PF00248 Aldo/keto reductase family CNQ55_RS13945 PF07027 Protein of unknown function (DUF1318) CNQ55_RS13950 PF13617 YnbE-like lipoprotein CNQ55_RS13955 PF11739 Dicarboxylate transport CNQ55_RS13960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CNQ55_RS13960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CNQ55_RS13965 PF03724 META domain CNQ55_RS13970 PF03891 Domain of unknown function (DUF333) CNQ55_RS13975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CNQ55_RS13975 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CNQ55_RS13975 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CNQ55_RS13975 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CNQ55_RS13975 PF10371 Domain of unknown function CNQ55_RS13980 PF00267 Gram-negative porin CNQ55_RS13985 PF00582 Universal stress protein family CNQ55_RS13990 PF00950 ABC 3 transport family CNQ55_RS14005 PF00589 Phage integrase family CNQ55_RS14005 PF12167 Arm DNA-binding domain CNQ55_RS14010 PF01171 PP-loop family CNQ55_RS14015 PF00271 Helicase conserved C-terminal domain CNQ55_RS14015 PF03880 DbpA RNA binding domain CNQ55_RS14015 PF00270 DEAD/DEAH box helicase CNQ55_RS14025 PF01544 CorA-like Mg2+ transporter protein CNQ55_RS14030 PF00990 Diguanylate cyclase, GGDEF domain CNQ55_RS14030 PF08448 PAS fold CNQ55_RS14035 PF01713 Smr domain CNQ55_RS14040 PF07690 Major Facilitator Superfamily CNQ55_RS14045 PF13533 Biotin-lipoyl like CNQ55_RS14050 PF02311 AraC-like ligand binding domain CNQ55_RS14050 PF12833 Helix-turn-helix domain CNQ55_RS14060 PF03806 AbgT putative transporter family CNQ55_RS14065 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CNQ55_RS14065 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CNQ55_RS14070 PF00027 Cyclic nucleotide-binding domain CNQ55_RS14070 PF00325 Bacterial regulatory proteins, crp family CNQ55_RS14075 PF00582 Universal stress protein family CNQ55_RS14080 PF10749 Protein of unknown function (DUF2534) CNQ55_RS14085 PF00924 Mechanosensitive ion channel CNQ55_RS14090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CNQ55_RS14095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS14095 PF03466 LysR substrate binding domain CNQ55_RS14100 PF12146 Serine aminopeptidase, S33 CNQ55_RS14110 PF00246 Zinc carboxypeptidase CNQ55_RS14115 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CNQ55_RS14115 PF13378 Enolase C-terminal domain-like CNQ55_RS14120 PF08534 Redoxin CNQ55_RS14125 PF00158 Sigma-54 interaction domain CNQ55_RS14125 PF13188 PAS domain CNQ55_RS14125 PF18024 Helix-turn-helix domain CNQ55_RS14130 PF05128 Domain of unknown function (DUF697) CNQ55_RS14135 PF04317 YcjX-like family, DUF463 CNQ55_RS14140 PF00356 Bacterial regulatory proteins, lacI family CNQ55_RS14140 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CNQ55_RS14145 PF09381 Outer membrane protein G (OmpG) CNQ55_RS14155 PF13419 Haloacid dehalogenase-like hydrolase CNQ55_RS14160 PF03632 Glycosyl hydrolase family 65 central catalytic domain CNQ55_RS14160 PF03636 Glycosyl hydrolase family 65, N-terminal domain CNQ55_RS14160 PF03633 Glycosyl hydrolase family 65, C-terminal domain CNQ55_RS14165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CNQ55_RS14165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CNQ55_RS14170 PF01261 Xylose isomerase-like TIM barrel CNQ55_RS14175 PF00107 Zinc-binding dehydrogenase CNQ55_RS14180 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS14185 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS14190 PF01547 Bacterial extracellular solute-binding protein CNQ55_RS14195 PF00128 Alpha amylase, catalytic domain CNQ55_RS14200 PF00581 Rhodanese-like domain CNQ55_RS14205 PF09584 Phage shock protein PspD (Phageshock_PspD) CNQ55_RS14210 PF04024 PspC domain CNQ55_RS14215 PF06667 Phage shock protein B CNQ55_RS14220 PF04012 PspA/IM30 family CNQ55_RS14225 PF02954 Bacterial regulatory protein, Fis family CNQ55_RS14225 PF00158 Sigma-54 interaction domain CNQ55_RS14235 PF10820 Protein of unknown function (DUF2543) CNQ55_RS14240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CNQ55_RS14245 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS14250 PF12911 N-terminal TM domain of oligopeptide transport permease C CNQ55_RS14250 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS14255 PF00005 ABC transporter CNQ55_RS14255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CNQ55_RS14260 PF00005 ABC transporter CNQ55_RS14265 PF07690 Major Facilitator Superfamily CNQ55_RS14270 PF02321 Outer membrane efflux protein CNQ55_RS14280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CNQ55_RS14280 PF00529 HlyD membrane-fusion protein of T1SS CNQ55_RS14285 PF00440 Bacterial regulatory proteins, tetR family CNQ55_RS14285 PF16295 Tetracyclin repressor-like, C-terminal domain CNQ55_RS14300 PF00575 S1 RNA binding domain CNQ55_RS14300 PF17876 Cold shock domain CNQ55_RS14300 PF08206 Ribonuclease B OB domain CNQ55_RS14300 PF00773 RNB domain CNQ55_RS14310 PF00990 Diguanylate cyclase, GGDEF domain CNQ55_RS14310 PF00563 EAL domain CNQ55_RS14310 PF13426 PAS domain CNQ55_RS14320 PF00455 DeoR C terminal sensor domain CNQ55_RS14320 PF08220 DeoR-like helix-turn-helix domain CNQ55_RS14325 PF05433 Glycine zipper 2TM domain CNQ55_RS14330 PF01253 Translation initiation factor SUI1 CNQ55_RS14335 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CNQ55_RS14340 PF18073 Rubredoxin metal binding domain CNQ55_RS14345 PF06305 Lipopolysaccharide assembly protein A domain CNQ55_RS14350 PF01569 PAP2 superfamily CNQ55_RS14355 PF00925 GTP cyclohydrolase II CNQ55_RS14360 PF00694 Aconitase C-terminal domain CNQ55_RS14360 PF00330 Aconitase family (aconitate hydratase) CNQ55_RS14380 PF03466 LysR substrate binding domain CNQ55_RS14380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS14390 PF08272 Topoisomerase I zinc-ribbon-like CNQ55_RS14390 PF01131 DNA topoisomerase CNQ55_RS14390 PF01751 Toprim domain CNQ55_RS14390 PF01396 Topoisomerase DNA binding C4 zinc finger CNQ55_RS14400 PF10692 Protein of unknown function (DUF2498) CNQ55_RS14405 PF08496 Peptidase family S49 N-terminal CNQ55_RS14405 PF01343 Peptidase family S49 CNQ55_RS14410 PF00106 short chain dehydrogenase CNQ55_RS14415 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CNQ55_RS14415 PF12557 Cob(I)alamin adenosyltransferase N terminal CNQ55_RS14430 PF00849 RNA pseudouridylate synthase CNQ55_RS14430 PF01479 S4 domain CNQ55_RS14435 PF09972 Predicted membrane protein (DUF2207) CNQ55_RS14440 PF01300 Telomere recombination CNQ55_RS14445 PF02811 PHP domain CNQ55_RS14450 PF08255 Trp-operon Leader Peptide CNQ55_RS14455 PF00425 chorismate binding enzyme CNQ55_RS14455 PF04715 Anthranilate synthase component I, N terminal region CNQ55_RS14460 PF00117 Glutamine amidotransferase class-I CNQ55_RS14460 PF00591 Glycosyl transferase family, a/b domain CNQ55_RS14460 PF02885 Glycosyl transferase family, helical bundle domain CNQ55_RS14470 PF00291 Pyridoxal-phosphate dependent enzyme CNQ55_RS14475 PF00290 Tryptophan synthase alpha chain CNQ55_RS14480 PF10685 Stress-induced bacterial acidophilic repeat motif CNQ55_RS14485 PF05974 Domain of unknown function (DUF892) CNQ55_RS14490 PF05974 Domain of unknown function (DUF892) CNQ55_RS14495 PF03922 OmpW family CNQ55_RS14510 PF04279 Intracellular septation protein A CNQ55_RS14515 PF03061 Thioesterase superfamily CNQ55_RS14520 PF03544 Gram-negative bacterial TonB protein C-terminal CNQ55_RS14525 PF03795 YCII-related domain CNQ55_RS14530 PF02254 TrkA-N domain CNQ55_RS14530 PF07885 Ion channel CNQ55_RS14540 PF13091 PLD-like domain CNQ55_RS14540 PF13396 Phospholipase_D-nuclease N-terminal CNQ55_RS14545 PF04269 Protein of unknown function, DUF440 CNQ55_RS14550 PF00005 ABC transporter CNQ55_RS14550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CNQ55_RS14555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CNQ55_RS14555 PF00005 ABC transporter CNQ55_RS14560 PF12911 N-terminal TM domain of oligopeptide transport permease C CNQ55_RS14560 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS14565 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS14570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CNQ55_RS14580 PF01914 MarC family integral membrane protein CNQ55_RS14585 PF00171 Aldehyde dehydrogenase family CNQ55_RS14585 PF00465 Iron-containing alcohol dehydrogenase CNQ55_RS14595 PF00265 Thymidine kinase CNQ55_RS14600 PF00816 H-NS histone family CNQ55_RS14605 PF00483 Nucleotidyl transferase CNQ55_RS14610 PF00072 Response regulator receiver domain CNQ55_RS14615 PF01734 Patatin-like phospholipase CNQ55_RS14620 PF02810 SEC-C motif CNQ55_RS14625 PF00551 Formyl transferase CNQ55_RS14625 PF01842 ACT domain CNQ55_RS14645 PF02665 Nitrate reductase gamma subunit CNQ55_RS14650 PF02613 Nitrate reductase delta subunit CNQ55_RS14655 PF13247 4Fe-4S dicluster domain CNQ55_RS14655 PF14711 Respiratory nitrate reductase beta C-terminal CNQ55_RS14660 PF01568 Molydopterin dinucleotide binding domain CNQ55_RS14660 PF00384 Molybdopterin oxidoreductase CNQ55_RS14660 PF14710 Respiratory nitrate reductase alpha N-terminal CNQ55_RS14665 PF07690 Major Facilitator Superfamily CNQ55_RS14675 PF07730 Histidine kinase CNQ55_RS14675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS14675 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CNQ55_RS14675 PF00672 HAMP domain CNQ55_RS14680 PF00072 Response regulator receiver domain CNQ55_RS14680 PF00196 Bacterial regulatory proteins, luxR family CNQ55_RS14685 PF11924 Inverse autotransporter, beta-domain CNQ55_RS14690 PF02635 DsrE/DsrF-like family CNQ55_RS14695 PF04752 ChaC-like protein CNQ55_RS14700 PF06150 ChaB CNQ55_RS14705 PF01699 Sodium/calcium exchanger protein CNQ55_RS14715 PF13940 Toxin Ldr, type I toxin-antitoxin system CNQ55_RS14720 PF00793 DAHP synthetase I family CNQ55_RS14725 PF13369 Transglutaminase-like superfamily CNQ55_RS14730 PF04247 Invasion gene expression up-regulator, SirB CNQ55_RS14735 PF13847 Methyltransferase domain CNQ55_RS14735 PF17827 PrmC N-terminal domain CNQ55_RS14740 PF03462 PCRF domain CNQ55_RS14740 PF00472 RF-1 domain CNQ55_RS14745 PF01488 Shikimate / quinate 5-dehydrogenase CNQ55_RS14745 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CNQ55_RS14745 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CNQ55_RS14750 PF03550 Outer membrane lipoprotein LolB CNQ55_RS14755 PF00288 GHMP kinases N terminal domain CNQ55_RS14755 PF08544 GHMP kinases C terminal CNQ55_RS14760 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CNQ55_RS14760 PF14572 Phosphoribosyl synthetase-associated domain CNQ55_RS14765 PF01740 STAS domain CNQ55_RS14765 PF00916 Sulfate permease family CNQ55_RS14770 PF10762 Protein of unknown function (DUF2583) CNQ55_RS14775 PF01195 Peptidyl-tRNA hydrolase CNQ55_RS14780 PF06071 Protein of unknown function (DUF933) CNQ55_RS14780 PF01926 50S ribosome-binding GTPase CNQ55_RS14790 PF00158 Sigma-54 interaction domain CNQ55_RS14790 PF02954 Bacterial regulatory protein, Fis family CNQ55_RS14790 PF00989 PAS fold CNQ55_RS14795 PF02733 Dak1 domain CNQ55_RS14800 PF02734 DAK2 domain CNQ55_RS14805 PF03610 PTS system fructose IIA component CNQ55_RS14805 PF05524 PEP-utilising enzyme, N-terminal CNQ55_RS14805 PF00381 PTS HPr component phosphorylation site CNQ55_RS14805 PF00391 PEP-utilising enzyme, mobile domain CNQ55_RS14810 PF01204 Trehalase CNQ55_RS14820 PF01497 Periplasmic binding protein CNQ55_RS14825 PF01032 FecCD transport family CNQ55_RS14830 PF00005 ABC transporter CNQ55_RS14835 PF13649 Methyltransferase domain CNQ55_RS14840 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CNQ55_RS14840 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CNQ55_RS14850 PF04226 Transglycosylase associated protein CNQ55_RS14855 PF07317 Flagellar regulator YcgR CNQ55_RS14855 PF07238 PilZ domain CNQ55_RS14860 PF01464 Transglycosylase SLT domain CNQ55_RS14870 PF17676 LD-carboxypeptidase C-terminal domain CNQ55_RS14870 PF02016 LD-carboxypeptidase N-terminal domain CNQ55_RS14875 PF02080 TrkA-C domain CNQ55_RS14875 PF00999 Sodium/hydrogen exchanger family CNQ55_RS14875 PF03471 Transporter associated domain CNQ55_RS14880 PF00842 Alanine racemase, C-terminal domain CNQ55_RS14880 PF01168 Alanine racemase, N-terminal domain CNQ55_RS14885 PF01266 FAD dependent oxidoreductase CNQ55_RS14890 PF04293 SpoVR like protein CNQ55_RS14895 PF00392 Bacterial regulatory proteins, gntR family CNQ55_RS14895 PF07840 FadR C-terminal domain CNQ55_RS14900 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CNQ55_RS14905 PF02600 Disulfide bond formation protein DsbB CNQ55_RS14910 PF11798 IMS family HHH motif CNQ55_RS14910 PF13438 Domain of unknown function (DUF4113) CNQ55_RS14910 PF00817 impB/mucB/samB family CNQ55_RS14910 PF11799 impB/mucB/samB family C-terminal domain CNQ55_RS14915 PF00717 Peptidase S24-like CNQ55_RS14925 PF03692 Putative zinc- or iron-chelating domain CNQ55_RS14930 PF01557 Fumarylacetoacetate (FAA) hydrolase family CNQ55_RS14935 PF05166 YcgL domain CNQ55_RS14945 PF04151 Bacterial pre-peptidase C-terminal domain CNQ55_RS14950 PF05666 Fels-1 Prophage Protein-like CNQ55_RS14960 PF05209 Septum formation inhibitor MinC, N-terminal domain CNQ55_RS14960 PF03775 Septum formation inhibitor MinC, C-terminal domain CNQ55_RS14965 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CNQ55_RS14970 PF03776 Septum formation topological specificity factor MinE CNQ55_RS14995 PF13436 Glycine-zipper domain CNQ55_RS15000 PF16456 YmgD protein CNQ55_RS15005 PF03797 Autotransporter beta-domain CNQ55_RS15045 PF10798 Biofilm development protein YmgB/AriR CNQ55_RS15055 PF10798 Biofilm development protein YmgB/AriR CNQ55_RS15060 PF04940 Sensors of blue-light using FAD CNQ55_RS15060 PF00563 EAL domain CNQ55_RS15065 PF13411 MerR HTH family regulatory protein CNQ55_RS15070 PF07166 Protein of unknown function (DUF1398) CNQ55_RS15075 PF00180 Isocitrate/isopropylmalate dehydrogenase CNQ55_RS15085 PF13673 Acetyltransferase (GNAT) domain CNQ55_RS15100 PF01297 Zinc-uptake complex component A periplasmic CNQ55_RS15105 PF00005 ABC transporter CNQ55_RS15110 PF00950 ABC 3 transport family CNQ55_RS15115 PF00950 ABC 3 transport family CNQ55_RS15130 PF08400 Prophage tail fibre N-terminal CNQ55_RS15130 PF03335 Phage tail fibre repeat CNQ55_RS15130 PF07484 Phage Tail Collar Domain CNQ55_RS15160 PF06791 Prophage tail length tape measure protein CNQ55_RS15200 PF03864 Phage major capsid protein E CNQ55_RS15210 PF01957 NfeD-like C-terminal, partner-binding CNQ55_RS15210 PF01972 Serine dehydrogenase proteinase CNQ55_RS15220 PF02831 gpW CNQ55_RS15225 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CNQ55_RS15230 PF07471 Phage DNA packaging protein Nu1 CNQ55_RS15255 PF06291 Bor protein CNQ55_RS15260 PF03245 Bacteriophage Rz lysis protein CNQ55_RS15265 PF00959 Phage lysozyme CNQ55_RS15270 PF04971 Bacteriophage P21 holin S CNQ55_RS15275 PF00267 Gram-negative porin CNQ55_RS15280 PF06530 Phage antitermination protein Q CNQ55_RS15290 PF05866 Endodeoxyribonuclease RusA CNQ55_RS15295 PF07102 Protein of unknown function (DUF1364) CNQ55_RS15340 PF00717 Peptidase S24-like CNQ55_RS15340 PF01381 Helix-turn-helix CNQ55_RS15410 PF00589 Phage integrase family CNQ55_RS15410 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain CNQ55_RS15415 PF00180 Isocitrate/isopropylmalate dehydrogenase CNQ55_RS15420 PF00849 RNA pseudouridylate synthase CNQ55_RS15425 PF00293 NUDIX domain CNQ55_RS15435 PF04356 Protein of unknown function (DUF489) CNQ55_RS15440 PF08328 Adenylosuccinate lyase C-terminal CNQ55_RS15440 PF00206 Lyase CNQ55_RS15445 PF00072 Response regulator receiver domain CNQ55_RS15445 PF00486 Transcriptional regulatory protein, C terminal CNQ55_RS15450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS15450 PF08918 PhoQ Sensor CNQ55_RS15455 PF08007 Cupin superfamily protein CNQ55_RS15460 PF01546 Peptidase family M20/M25/M40 CNQ55_RS15460 PF07687 Peptidase dimerisation domain CNQ55_RS15470 PF08402 TOBE domain CNQ55_RS15470 PF00005 ABC transporter CNQ55_RS15475 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS15495 PF03335 Phage tail fibre repeat CNQ55_RS15495 PF08400 Prophage tail fibre N-terminal CNQ55_RS15495 PF07484 Phage Tail Collar Domain CNQ55_RS15525 PF00267 Gram-negative porin CNQ55_RS15535 PF06791 Prophage tail length tape measure protein CNQ55_RS15575 PF03864 Phage major capsid protein E CNQ55_RS15585 PF01343 Peptidase family S49 CNQ55_RS15595 PF02831 gpW CNQ55_RS15600 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CNQ55_RS15605 PF07471 Phage DNA packaging protein Nu1 CNQ55_RS15620 PF03245 Bacteriophage Rz lysis protein CNQ55_RS15630 PF00959 Phage lysozyme CNQ55_RS15635 PF04971 Bacteriophage P21 holin S CNQ55_RS15650 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase CNQ55_RS15665 PF01555 DNA methylase CNQ55_RS15690 PF05866 Endodeoxyribonuclease RusA CNQ55_RS15695 PF06147 Protein of unknown function (DUF968) CNQ55_RS15755 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT CNQ55_RS15765 PF07151 Protein of unknown function (DUF1391) CNQ55_RS15785 PF05358 DicB protein CNQ55_RS15790 PF07358 Protein of unknown function (DUF1482) CNQ55_RS15805 PF00589 Phage integrase family CNQ55_RS15805 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain CNQ55_RS15810 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS15815 PF13416 Bacterial extracellular solute-binding protein CNQ55_RS15820 PF12158 Protein of unknown function (DUF3592) CNQ55_RS15825 PF04536 TPM domain CNQ55_RS15830 PF02146 Sir2 family CNQ55_RS15835 PF00480 ROK family CNQ55_RS15840 PF02687 FtsX-like permease family CNQ55_RS15840 PF12704 MacB-like periplasmic core domain CNQ55_RS15845 PF00005 ABC transporter CNQ55_RS15850 PF12704 MacB-like periplasmic core domain CNQ55_RS15850 PF02687 FtsX-like permease family CNQ55_RS15855 PF01757 Acyltransferase family CNQ55_RS15860 PF00270 DEAD/DEAH box helicase CNQ55_RS15860 PF00271 Helicase conserved C-terminal domain CNQ55_RS15860 PF03461 TRCF domain CNQ55_RS15860 PF17757 UvrB interaction domain CNQ55_RS15860 PF02559 CarD-like/TRCF domain CNQ55_RS15865 PF03734 L,D-transpeptidase catalytic domain CNQ55_RS15865 PF17969 L,D-transpeptidase C-terminal domain CNQ55_RS15865 PF01476 LysM domain CNQ55_RS15870 PF07338 Protein of unknown function (DUF1471) CNQ55_RS15875 PF00440 Bacterial regulatory proteins, tetR family CNQ55_RS15880 PF05433 Glycine zipper 2TM domain CNQ55_RS15890 PF07992 Pyridine nucleotide-disulphide oxidoreductase CNQ55_RS15895 PF05728 Uncharacterised protein family (UPF0227) CNQ55_RS15900 PF00933 Glycosyl hydrolase family 3 N terminal domain CNQ55_RS15905 PF01636 Phosphotransferase enzyme family CNQ55_RS15910 PF13036 Peptidoglycan-synthase activator LpoB CNQ55_RS15915 PF07233 Protein of unknown function (DUF1425) CNQ55_RS15920 PF01230 HIT domain CNQ55_RS15925 PF07715 TonB-dependent Receptor Plug Domain CNQ55_RS15925 PF00593 TonB dependent receptor CNQ55_RS15930 PF00367 phosphotransferase system, EIIB CNQ55_RS15930 PF02378 Phosphotransferase system, EIIC CNQ55_RS15935 PF01026 TatD related DNase CNQ55_RS15940 PF09115 DNA polymerase III, delta subunit, C terminal CNQ55_RS15945 PF02223 Thymidylate kinase CNQ55_RS15950 PF02618 YceG-like family CNQ55_RS15955 PF01063 Amino-transferase class IV CNQ55_RS15960 PF00109 Beta-ketoacyl synthase, N-terminal domain CNQ55_RS15960 PF02801 Beta-ketoacyl synthase, C-terminal domain CNQ55_RS15965 PF00550 Phosphopantetheine attachment site CNQ55_RS15975 PF00698 Acyl transferase domain CNQ55_RS15980 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CNQ55_RS15980 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CNQ55_RS15985 PF02504 Fatty acid synthesis protein CNQ55_RS15990 PF01783 Ribosomal L32p protein family CNQ55_RS15995 PF02620 Large ribosomal RNA subunit accumulation protein YceD CNQ55_RS16000 PF02545 Maf-like protein CNQ55_RS16005 PF01479 S4 domain CNQ55_RS16005 PF00849 RNA pseudouridylate synthase CNQ55_RS16015 PF00575 S1 RNA binding domain CNQ55_RS16015 PF10150 Ribonuclease E/G family CNQ55_RS16015 PF12111 Polyribonucleotide phosphorylase C terminal CNQ55_RS16020 PF00669 Bacterial flagellin N-terminal helical region CNQ55_RS16025 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CNQ55_RS16025 PF00460 Flagella basal body rod protein CNQ55_RS16030 PF10135 Rod binding protein CNQ55_RS16030 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CNQ55_RS16035 PF02119 Flagellar P-ring protein CNQ55_RS16040 PF02107 Flagellar L-ring protein CNQ55_RS16045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CNQ55_RS16045 PF00460 Flagella basal body rod protein CNQ55_RS16050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CNQ55_RS16050 PF00460 Flagella basal body rod protein CNQ55_RS16055 PF00460 Flagella basal body rod protein CNQ55_RS16055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CNQ55_RS16055 PF07559 Flagellar basal body protein FlaE CNQ55_RS16060 PF13861 FlgD Tudor-like domain CNQ55_RS16060 PF13860 FlgD Ig-like domain CNQ55_RS16060 PF03963 Flagellar hook capping protein - N-terminal region CNQ55_RS16065 PF00460 Flagella basal body rod protein CNQ55_RS16065 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CNQ55_RS16070 PF00460 Flagella basal body rod protein CNQ55_RS16075 PF13144 Chaperone for flagella basal body P-ring formation CNQ55_RS16080 PF04316 Anti-sigma-28 factor, FlgM CNQ55_RS16085 PF05130 FlgN protein CNQ55_RS16090 PF03023 Lipid II flippase MurJ CNQ55_RS16095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CNQ55_RS16100 PF04337 Protein of unknown function, DUF480 CNQ55_RS16105 PF13302 Acetyltransferase (GNAT) domain CNQ55_RS16110 PF07690 Major Facilitator Superfamily CNQ55_RS16115 PF13417 Glutathione S-transferase, N-terminal domain CNQ55_RS16115 PF04399 Glutaredoxin 2, C terminal domain CNQ55_RS16120 PF07273 Protein of unknown function (DUF1439) CNQ55_RS16125 PF01979 Amidohydrolase family CNQ55_RS16130 PF06183 DinI-like family CNQ55_RS16135 PF13991 BssS protein family CNQ55_RS16140 PF01266 FAD dependent oxidoreductase CNQ55_RS16145 PF10968 Protein of unknown function (DUF2770) CNQ55_RS16150 PF01292 Prokaryotic cytochrome b561 CNQ55_RS16155 PF04264 YceI-like domain CNQ55_RS16160 PF17773 UPF0176 acylphosphatase like domain CNQ55_RS16160 PF12368 Rhodanase C-terminal CNQ55_RS16160 PF00581 Rhodanese-like domain CNQ55_RS16165 PF03279 Bacterial lipid A biosynthesis acyltransferase CNQ55_RS16170 PF07690 Major Facilitator Superfamily CNQ55_RS16175 PF13984 MsyB protein CNQ55_RS16180 PF07119 Protein of unknown function (DUF1375) CNQ55_RS16190 PF04349 Periplasmic glucan biosynthesis protein, MdoG CNQ55_RS16205 PF01757 Acyltransferase family CNQ55_RS16210 PF13091 PLD-like domain CNQ55_RS16215 PF01661 Macro domain CNQ55_RS16225 PF10610 Thin aggregative fimbriae synthesis protein CNQ55_RS16230 PF07012 Curlin associated repeat CNQ55_RS16235 PF07012 Curlin associated repeat CNQ55_RS16250 PF00196 Bacterial regulatory proteins, luxR family CNQ55_RS16255 PF10627 Curli assembly protein CsgE CNQ55_RS16260 PF10614 Type VIII secretion system (T8SS), CsgF protein CNQ55_RS16265 PF03783 Curli production assembly/transport component CsgG CNQ55_RS16270 PF06496 Protein of unknown function (DUF1097) CNQ55_RS16275 PF02613 Nitrate reductase delta subunit CNQ55_RS16280 PF02811 PHP domain CNQ55_RS16285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CNQ55_RS16295 PF00990 Diguanylate cyclase, GGDEF domain CNQ55_RS16295 PF17158 Membrane-associated sensor, integral membrane domain CNQ55_RS16305 PF01522 Polysaccharide deacetylase CNQ55_RS16305 PF14883 Hypothetical glycosyl hydrolase family 13 CNQ55_RS16310 PF00535 Glycosyl transferase family 2 CNQ55_RS16315 PF13994 PgaD-like protein CNQ55_RS16320 PF02562 PhoH-like protein CNQ55_RS16330 PF04261 Dyp-type peroxidase family CNQ55_RS16335 PF13473 Cupredoxin-like domain CNQ55_RS16335 PF09375 Imelysin CNQ55_RS16340 PF03239 Iron permease FTR1 family CNQ55_RS16345 PF00474 Sodium:solute symporter family CNQ55_RS16360 PF14850 DNA-binding domain of Proline dehydrogenase CNQ55_RS16360 PF01619 Proline dehydrogenase CNQ55_RS16360 PF00171 Aldehyde dehydrogenase family CNQ55_RS16360 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CNQ55_RS16365 PF08362 YcdC-like protein, C-terminal region CNQ55_RS16365 PF00440 Bacterial regulatory proteins, tetR family CNQ55_RS16370 PF00296 Luciferase-like monooxygenase CNQ55_RS16375 PF00857 Isochorismatase family CNQ55_RS16380 PF01042 Endoribonuclease L-PSP CNQ55_RS16385 PF12697 Alpha/beta hydrolase family CNQ55_RS16390 PF00881 Nitroreductase family CNQ55_RS16395 PF01613 Flavin reductase like domain CNQ55_RS16400 PF00860 Permease family CNQ55_RS16405 PF10685 Stress-induced bacterial acidophilic repeat motif CNQ55_RS16415 PF03358 NADPH-dependent FMN reductase CNQ55_RS16420 PF13993 YccJ-like protein CNQ55_RS16425 PF00328 Histidine phosphatase superfamily (branch 2) CNQ55_RS16430 PF00226 DnaJ domain CNQ55_RS16430 PF01556 DnaJ C terminal domain CNQ55_RS16440 PF02613 Nitrate reductase delta subunit CNQ55_RS16445 PF01568 Molydopterin dinucleotide binding domain CNQ55_RS16445 PF18364 Molybdopterin oxidoreductase N-terminal domain CNQ55_RS16445 PF00384 Molybdopterin oxidoreductase CNQ55_RS16450 PF03264 NapC/NirT cytochrome c family, N-terminal region CNQ55_RS16455 PF00072 Response regulator receiver domain CNQ55_RS16455 PF00486 Transcriptional regulatory protein, C terminal CNQ55_RS16460 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CNQ55_RS16475 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system CNQ55_RS16480 PF15939 Putative antitoxin of bacterial toxin-antitoxin system CNQ55_RS16490 PF00313 'Cold-shock' DNA-binding domain CNQ55_RS16495 PF00313 'Cold-shock' DNA-binding domain CNQ55_RS16500 PF00328 Histidine phosphatase superfamily (branch 2) CNQ55_RS16505 PF08173 Membrane bound YbgT-like protein CNQ55_RS16510 PF02322 Cytochrome bd terminal oxidase subunit II CNQ55_RS16515 PF01654 Cytochrome bd terminal oxidase subunit I CNQ55_RS16520 PF04809 HupH hydrogenase expression protein, C-terminal conserved region CNQ55_RS16525 PF07449 Hydrogenase-1 expression protein HyaE CNQ55_RS16530 PF01750 Hydrogenase maturation protease CNQ55_RS16535 PF01292 Prokaryotic cytochrome b561 CNQ55_RS16540 PF00374 Nickel-dependent hydrogenase CNQ55_RS16545 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CNQ55_RS16545 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CNQ55_RS16555 PF01027 Inhibitor of apoptosis-promoting Bax1 CNQ55_RS16560 PF04358 DsrC like protein CNQ55_RS16565 PF00708 Acylphosphatase CNQ55_RS16570 PF17785 PUA-like domain CNQ55_RS16570 PF10672 S-adenosylmethionine-dependent methyltransferase CNQ55_RS16575 PF08755 Hemimethylated DNA-binding protein YccV like CNQ55_RS16580 PF13380 CoA binding domain CNQ55_RS16585 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CNQ55_RS16590 PF02142 MGS-like domain CNQ55_RS16595 PF13361 UvrD-like helicase C-terminal domain CNQ55_RS16595 PF00580 UvrD/REP helicase N-terminal domain CNQ55_RS16595 PF12462 DNA helicase IV / RNA helicase N terminal CNQ55_RS16600 PF03733 Inner membrane component domain CNQ55_RS16605 PF12805 FUSC-like inner membrane protein yccS CNQ55_RS16610 PF04993 TfoX N-terminal domain CNQ55_RS16610 PF04994 TfoX C-terminal domain CNQ55_RS16615 PF03846 Cell division inhibitor SulA CNQ55_RS16625 PF01389 OmpA-like transmembrane domain CNQ55_RS16625 PF00691 OmpA family CNQ55_RS16630 PF06303 MatP N-terminal domain CNQ55_RS16630 PF17414 MatP C-terminal ribbon-helix-helix domain CNQ55_RS16635 PF13654 AAA domain CNQ55_RS16635 PF05362 Lon protease (S16) C-terminal proteolytic domain CNQ55_RS16640 PF07977 FabA-like domain CNQ55_RS16645 PF04957 Ribosome modulation factor CNQ55_RS16650 PF03886 ABC-type transport auxiliary lipoprotein component CNQ55_RS16655 PF02470 MlaD protein CNQ55_RS16660 PF04403 Paraquat-inducible protein A CNQ55_RS16665 PF00005 ABC transporter CNQ55_RS16665 PF16326 ABC transporter C-terminal domain CNQ55_RS16665 PF12848 ABC transporter CNQ55_RS16670 PF02926 THUMP domain CNQ55_RS16670 PF01170 Putative RNA methylase family UPF0020 CNQ55_RS16670 PF10672 S-adenosylmethionine-dependent methyltransferase CNQ55_RS16675 PF03476 MOSC N-terminal beta barrel domain CNQ55_RS16675 PF03473 MOSC domain CNQ55_RS16675 PF00111 2Fe-2S iron-sulfur cluster binding domain CNQ55_RS16680 PF07126 Cell-division protein ZapC CNQ55_RS16685 PF01180 Dihydroorotate dehydrogenase CNQ55_RS16695 PF03358 NADPH-dependent FMN reductase CNQ55_RS16700 PF09084 NMT1/THI5 like CNQ55_RS16705 PF00296 Luciferase-like monooxygenase CNQ55_RS16710 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS16715 PF00005 ABC transporter CNQ55_RS16720 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CNQ55_RS16720 PF11940 Domain of unknown function (DUF3458) Ig-like fold CNQ55_RS16720 PF01433 Peptidase family M1 domain CNQ55_RS16725 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CNQ55_RS16725 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CNQ55_RS16730 PF00152 tRNA synthetases class II (D, K and N) CNQ55_RS16730 PF01336 OB-fold nucleic acid binding domain CNQ55_RS16735 PF00267 Gram-negative porin CNQ55_RS16745 PF00155 Aminotransferase class I and II CNQ55_RS16750 PF00753 Metallo-beta-lactamase superfamily CNQ55_RS16755 PF05951 Bacterial protein of unknown function (DUF882) CNQ55_RS16765 PF03734 L,D-transpeptidase catalytic domain CNQ55_RS16765 PF01471 Putative peptidoglycan binding domain CNQ55_RS16770 PF16330 MukB hinge domain CNQ55_RS16770 PF04310 MukB N-terminal CNQ55_RS16775 PF04288 MukE-like family CNQ55_RS16780 PF03882 MukF winged-helix domain CNQ55_RS16780 PF17193 MukF C-terminal domain CNQ55_RS16780 PF17192 MukF middle domain CNQ55_RS16785 PF13847 Methyltransferase domain CNQ55_RS16790 PF02698 DUF218 domain CNQ55_RS16795 PF01636 Phosphotransferase enzyme family CNQ55_RS16800 PF02348 Cytidylyltransferase CNQ55_RS16805 PF03966 Trm112p-like protein CNQ55_RS16810 PF06224 Winged helix DNA-binding domain CNQ55_RS16815 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CNQ55_RS16820 PF00664 ABC transporter transmembrane region CNQ55_RS16820 PF00005 ABC transporter CNQ55_RS16825 PF03772 Competence protein CNQ55_RS16825 PF00753 Metallo-beta-lactamase superfamily CNQ55_RS16830 PF00216 Bacterial DNA-binding protein CNQ55_RS16835 PF00575 S1 RNA binding domain CNQ55_RS16840 PF02224 Cytidylate kinase CNQ55_RS16845 PF01435 Peptidase family M48 CNQ55_RS16850 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CNQ55_RS16855 PF00266 Aminotransferase class-V CNQ55_RS16860 PF04239 Protein of unknown function (DUF421) CNQ55_RS16865 PF18381 YcaO cyclodehydratase C-terminal domain CNQ55_RS16865 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CNQ55_RS16870 PF01226 Formate/nitrite transporter CNQ55_RS16875 PF01228 Glycine radical CNQ55_RS16875 PF02901 Pyruvate formate lyase-like CNQ55_RS16880 PF04055 Radical SAM superfamily CNQ55_RS16885 PF07690 Major Facilitator Superfamily CNQ55_RS16890 PF00857 Isochorismatase family CNQ55_RS16895 PF04976 DMSO reductase anchor subunit (DmsC) CNQ55_RS16900 PF13247 4Fe-4S dicluster domain CNQ55_RS16900 PF12800 4Fe-4S binding domain CNQ55_RS16905 PF01568 Molydopterin dinucleotide binding domain CNQ55_RS16905 PF00384 Molybdopterin oxidoreductase CNQ55_RS16905 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CNQ55_RS16910 PF02403 Seryl-tRNA synthetase N-terminal domain CNQ55_RS16910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CNQ55_RS16915 PF12002 MgsA AAA+ ATPase C terminal CNQ55_RS16915 PF00004 ATPase family associated with various cellular activities (AAA) CNQ55_RS16915 PF16193 AAA C-terminal domain CNQ55_RS16920 PF03548 Outer membrane lipoprotein carrier protein LolA CNQ55_RS16925 PF09397 Ftsk gamma domain CNQ55_RS16925 PF01580 FtsK/SpoIIIE family CNQ55_RS16925 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CNQ55_RS16925 PF17854 FtsK alpha domain CNQ55_RS16930 PF01037 Lrp/AsnC ligand binding domain CNQ55_RS16940 PF07992 Pyridine nucleotide-disulphide oxidoreductase CNQ55_RS16945 PF00664 ABC transporter transmembrane region CNQ55_RS16945 PF00005 ABC transporter CNQ55_RS16950 PF00664 ABC transporter transmembrane region CNQ55_RS16950 PF00005 ABC transporter CNQ55_RS16955 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CNQ55_RS16965 PF01176 Translation initiation factor 1A / IF-1 CNQ55_RS16975 PF02861 Clp amino terminal domain, pathogenicity island component CNQ55_RS16975 PF10431 C-terminal, D2-small domain, of ClpB protein CNQ55_RS16975 PF00004 ATPase family associated with various cellular activities (AAA) CNQ55_RS16975 PF17871 AAA lid domain CNQ55_RS16975 PF07724 AAA domain (Cdc48 subfamily) CNQ55_RS16980 PF02617 ATP-dependent Clp protease adaptor protein ClpS CNQ55_RS16985 PF00313 'Cold-shock' DNA-binding domain CNQ55_RS16990 PF12704 MacB-like periplasmic core domain CNQ55_RS16990 PF02687 FtsX-like permease family CNQ55_RS16990 PF00005 ABC transporter CNQ55_RS16995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CNQ55_RS17000 PF04393 Protein of unknown function (DUF535) CNQ55_RS17005 PF11398 Protein of unknown function (DUF2813) CNQ55_RS17010 PF00230 Major intrinsic protein CNQ55_RS17020 PF03956 Lysine exporter LysO CNQ55_RS17025 PF03063 Prismane/CO dehydrogenase family CNQ55_RS17030 PF00175 Oxidoreductase NAD-binding domain CNQ55_RS17030 PF00111 2Fe-2S iron-sulfur cluster binding domain CNQ55_RS17030 PF00970 Oxidoreductase FAD-binding domain CNQ55_RS17035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CNQ55_RS17035 PF00205 Thiamine pyrophosphate enzyme, central domain CNQ55_RS17035 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CNQ55_RS17040 PF01212 Beta-eliminating lyase CNQ55_RS17045 PF11066 Protein of unknown function (DUF2867) CNQ55_RS17045 PF13460 NAD(P)H-binding CNQ55_RS17050 PF01370 NAD dependent epimerase/dehydratase family CNQ55_RS17055 PF01510 N-acetylmuramoyl-L-alanine amidase CNQ55_RS17060 PF01906 Putative heavy-metal-binding CNQ55_RS17065 PF12883 Protein of unknown function (DUF3828) CNQ55_RS17070 PF00005 ABC transporter CNQ55_RS17075 PF00497 Bacterial extracellular solute-binding proteins, family 3 CNQ55_RS17080 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS17085 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS17090 PF00497 Bacterial extracellular solute-binding proteins, family 3 CNQ55_RS17095 PF05958 tRNA (Uracil-5-)-methyltransferase CNQ55_RS17100 PF10767 Protein of unknown function (DUF2593) CNQ55_RS17105 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS17110 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS17115 PF08402 TOBE domain CNQ55_RS17115 PF00005 ABC transporter CNQ55_RS17120 PF13416 Bacterial extracellular solute-binding protein CNQ55_RS17130 PF10722 Putative bacterial sensory transduction regulator CNQ55_RS17135 PF08443 RimK-like ATP-grasp domain CNQ55_RS17135 PF18030 RimK PreATP-grasp domain CNQ55_RS17140 PF00881 Nitroreductase family CNQ55_RS17145 PF07214 Protein of unknown function (DUF1418) CNQ55_RS17150 PF00462 Glutaredoxin CNQ55_RS17155 PF11045 Putative inner membrane protein of Enterobacteriaceae CNQ55_RS17160 PF02080 TrkA-C domain CNQ55_RS17160 PF06826 Predicted Permease Membrane Region CNQ55_RS17165 PF00440 Bacterial regulatory proteins, tetR family CNQ55_RS17170 PF07690 Major Facilitator Superfamily CNQ55_RS17185 PF07690 Major Facilitator Superfamily CNQ55_RS17190 PF01569 PAP2 superfamily CNQ55_RS17195 PF00455 DeoR C terminal sensor domain CNQ55_RS17195 PF08220 DeoR-like helix-turn-helix domain CNQ55_RS17200 PF07943 Penicillin-binding protein 5, C-terminal domain CNQ55_RS17200 PF00768 D-alanyl-D-alanine carboxypeptidase CNQ55_RS17205 PF13417 Glutathione S-transferase, N-terminal domain CNQ55_RS17205 PF00043 Glutathione S-transferase, C-terminal domain CNQ55_RS17210 PF07995 Glucose / Sorbosone dehydrogenase CNQ55_RS17215 PF10799 Biofilm formation protein (YliH/bssR) CNQ55_RS17220 PF04055 Radical SAM superfamily CNQ55_RS17220 PF00919 Uncharacterized protein family UPF0004 CNQ55_RS17220 PF18693 TRAM domain CNQ55_RS17225 PF17156 Gammaproteobacterial periplasmic sensor domain CNQ55_RS17225 PF00990 Diguanylate cyclase, GGDEF domain CNQ55_RS17230 PF00563 EAL domain CNQ55_RS17230 PF17153 Periplasmic sensor domain, extracellular CNQ55_RS17235 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS17235 PF12911 N-terminal TM domain of oligopeptide transport permease C CNQ55_RS17240 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS17245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CNQ55_RS17250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CNQ55_RS17250 PF00005 ABC transporter CNQ55_RS17255 PF01112 Asparaginase CNQ55_RS17260 PF03453 MoeA N-terminal region (domain I and II) CNQ55_RS17260 PF03454 MoeA C-terminal region (domain IV) CNQ55_RS17260 PF00994 Probable molybdopterin binding domain CNQ55_RS17265 PF00899 ThiF family CNQ55_RS17270 PF00923 Transaldolase/Fructose-6-phosphate aldolase CNQ55_RS17275 PF04055 Radical SAM superfamily CNQ55_RS17280 PF01228 Glycine radical CNQ55_RS17280 PF02901 Pyruvate formate lyase-like CNQ55_RS17290 PF00005 ABC transporter CNQ55_RS17290 PF12848 ABC transporter CNQ55_RS17295 PF17969 L,D-transpeptidase C-terminal domain CNQ55_RS17295 PF03734 L,D-transpeptidase catalytic domain CNQ55_RS17300 PF03600 Citrate transporter CNQ55_RS17305 PF02742 Iron dependent repressor, metal binding and dimerisation domain CNQ55_RS17305 PF01325 Iron dependent repressor, N-terminal DNA binding domain CNQ55_RS17320 PF00884 Sulfatase CNQ55_RS17325 PF13505 Outer membrane protein beta-barrel domain CNQ55_RS17330 PF00892 EamA-like transporter family CNQ55_RS17335 PF00210 Ferritin-like domain CNQ55_RS17350 PF00497 Bacterial extracellular solute-binding proteins, family 3 CNQ55_RS17355 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS17360 PF00005 ABC transporter CNQ55_RS17365 PF00924 Mechanosensitive ion channel CNQ55_RS17370 PF05971 RNA methyltransferase CNQ55_RS17375 PF07338 Protein of unknown function (DUF1471) CNQ55_RS17380 PF07715 TonB-dependent Receptor Plug Domain CNQ55_RS17380 PF00593 TonB dependent receptor CNQ55_RS17385 PF13640 2OG-Fe(II) oxygenase superfamily CNQ55_RS17385 PF18331 PKHD-type hydroxylase C-terminal domain CNQ55_RS17390 PF01258 Prokaryotic dksA/traR C4-type zinc finger CNQ55_RS17395 PF07338 Protein of unknown function (DUF1471) CNQ55_RS17400 PF02615 Malate/L-lactate dehydrogenase CNQ55_RS17405 PF02885 Glycosyl transferase family, helical bundle domain CNQ55_RS17410 PF00270 DEAD/DEAH box helicase CNQ55_RS17410 PF06733 DEAD_2 CNQ55_RS17410 PF13307 Helicase C-terminal domain CNQ55_RS17415 PF08719 Domain of unknown function (DUF1768) CNQ55_RS17420 PF00270 DEAD/DEAH box helicase CNQ55_RS17420 PF00271 Helicase conserved C-terminal domain CNQ55_RS17425 PF00440 Bacterial regulatory proteins, tetR family CNQ55_RS17425 PF09209 Tetracyclin repressor-like, C-terminal domain CNQ55_RS17430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CNQ55_RS17435 PF00005 ABC transporter CNQ55_RS17450 PF11076 Putative inner membrane protein YbhQ CNQ55_RS17455 PF03372 Endonuclease/Exonuclease/phosphatase family CNQ55_RS17460 PF13091 PLD-like domain CNQ55_RS17465 PF03706 Lysylphosphatidylglycerol synthase TM region CNQ55_RS17470 PF01027 Inhibitor of apoptosis-promoting Bax1 CNQ55_RS17475 PF01027 Inhibitor of apoptosis-promoting Bax1 CNQ55_RS17480 PF02391 MoaE protein CNQ55_RS17485 PF02597 ThiS family CNQ55_RS17490 PF01967 MoaC family CNQ55_RS17495 PF00994 Probable molybdopterin binding domain CNQ55_RS17500 PF06463 Molybdenum Cofactor Synthesis C CNQ55_RS17500 PF04055 Radical SAM superfamily CNQ55_RS17505 PF01933 Uncharacterised protein family UPF0052 CNQ55_RS17510 PF02151 UvrB/uvrC motif CNQ55_RS17510 PF12344 Ultra-violet resistance protein B CNQ55_RS17510 PF17757 UvrB interaction domain CNQ55_RS17510 PF04851 Type III restriction enzyme, res subunit CNQ55_RS17510 PF00271 Helicase conserved C-terminal domain CNQ55_RS17520 PF08241 Methyltransferase domain CNQ55_RS17525 PF00155 Aminotransferase class I and II CNQ55_RS17530 PF04055 Radical SAM superfamily CNQ55_RS17530 PF06968 Biotin and Thiamin Synthesis associated domain CNQ55_RS17535 PF00202 Aminotransferase class-III CNQ55_RS17540 PF12323 Helix-turn-helix domain CNQ55_RS17540 PF07282 Putative transposase DNA-binding domain CNQ55_RS17540 PF01385 Probable transposase CNQ55_RS17545 PF01161 Phosphatidylethanolamine-binding protein CNQ55_RS17620 PF17288 Terminase RNAseH like domain CNQ55_RS17620 PF04466 Phage terminase large subunit CNQ55_RS17640 PF03245 Bacteriophage Rz lysis protein CNQ55_RS17645 PF00959 Phage lysozyme CNQ55_RS17680 PF07102 Protein of unknown function (DUF1364) CNQ55_RS17720 PF00772 DnaB-like helicase N terminal domain CNQ55_RS17720 PF03796 DnaB-like helicase C terminal domain CNQ55_RS17780 PF03837 RecT family CNQ55_RS17860 PF00589 Phage integrase family CNQ55_RS17860 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain CNQ55_RS17865 PF01095 Pectinesterase CNQ55_RS17870 PF00330 Aconitase family (aconitate hydratase) CNQ55_RS17870 PF00694 Aconitase C-terminal domain CNQ55_RS17875 PF00939 Sodium:sulfate symporter transmembrane region CNQ55_RS17880 PF04303 PrpF protein CNQ55_RS17885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS17885 PF03466 LysR substrate binding domain CNQ55_RS17890 PF10282 Lactonase, 7-bladed beta-propeller CNQ55_RS17900 PF03459 TOBE domain CNQ55_RS17900 PF00005 ABC transporter CNQ55_RS17905 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS17920 PF10766 Multidrug efflux pump-associated protein AcrZ CNQ55_RS17925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS17925 PF03459 TOBE domain CNQ55_RS17935 PF00005 ABC transporter CNQ55_RS17940 PF16363 GDP-mannose 4,6 dehydratase CNQ55_RS17945 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CNQ55_RS17945 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CNQ55_RS17950 PF00288 GHMP kinases N terminal domain CNQ55_RS17950 PF08544 GHMP kinases C terminal CNQ55_RS17950 PF10509 Galactokinase galactose-binding signature CNQ55_RS17955 PF01263 Aldose 1-epimerase CNQ55_RS17960 PF00300 Histidine phosphatase superfamily (branch 1) CNQ55_RS17965 PF00793 DAHP synthetase I family CNQ55_RS17975 PF13985 YbgS-like protein CNQ55_RS17980 PF01545 Cation efflux family CNQ55_RS17985 PF04973 Nicotinamide mononucleotide transporter CNQ55_RS17990 PF02445 Quinolinate synthetase A protein CNQ55_RS18030 PF13174 Tetratricopeptide repeat CNQ55_RS18030 PF16331 TolA binding protein trimerisation CNQ55_RS18035 PF00691 OmpA family CNQ55_RS18040 PF07676 WD40-like Beta Propeller Repeat CNQ55_RS18040 PF04052 TolB amino-terminal domain CNQ55_RS18045 PF06519 TolA C-terminal CNQ55_RS18050 PF02472 Biopolymer transport protein ExbD/TolR CNQ55_RS18055 PF01618 MotA/TolQ/ExbB proton channel family CNQ55_RS18060 PF03061 Thioesterase superfamily CNQ55_RS18065 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CNQ55_RS18070 PF08173 Membrane bound YbgT-like protein CNQ55_RS18075 PF02322 Cytochrome bd terminal oxidase subunit II CNQ55_RS18080 PF01654 Cytochrome bd terminal oxidase subunit I CNQ55_RS18095 PF02629 CoA binding domain CNQ55_RS18095 PF00549 CoA-ligase CNQ55_RS18100 PF00549 CoA-ligase CNQ55_RS18100 PF08442 ATP-grasp domain CNQ55_RS18105 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CNQ55_RS18105 PF02817 e3 binding domain CNQ55_RS18105 PF00364 Biotin-requiring enzyme CNQ55_RS18110 PF16078 2-oxoglutarate dehydrogenase N-terminus CNQ55_RS18110 PF02779 Transketolase, pyrimidine binding domain CNQ55_RS18110 PF16870 2-oxoglutarate dehydrogenase C-terminal CNQ55_RS18110 PF00676 Dehydrogenase E1 component CNQ55_RS18115 PF13085 2Fe-2S iron-sulfur cluster binding domain CNQ55_RS18120 PF02910 Fumarate reductase flavoprotein C-term CNQ55_RS18120 PF00890 FAD binding domain CNQ55_RS18125 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CNQ55_RS18130 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CNQ55_RS18145 PF00285 Citrate synthase, C-terminal domain CNQ55_RS18155 PF05145 Transition state regulatory protein AbrB CNQ55_RS18160 PF06827 Zinc finger found in FPG and IleRS CNQ55_RS18160 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CNQ55_RS18160 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CNQ55_RS18165 PF03746 LamB/YcsF family CNQ55_RS18170 PF02626 Carboxyltransferase domain, subdomain A and B CNQ55_RS18175 PF02682 Carboxyltransferase domain, subdomain C and D CNQ55_RS18180 PF01784 NIF3 (NGG1p interacting factor 3) CNQ55_RS18185 PF00854 POT family CNQ55_RS18190 PF00875 DNA photolyase CNQ55_RS18190 PF03441 FAD binding domain of DNA photolyase CNQ55_RS18195 PF08349 Protein of unknown function (DUF1722) CNQ55_RS18200 PF10725 Protein of unknown function (DUF2517) CNQ55_RS18205 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) CNQ55_RS18210 PF03814 Potassium-transporting ATPase A subunit CNQ55_RS18220 PF02669 K+-transporting ATPase, c chain CNQ55_RS18225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS18225 PF13493 Domain of unknown function (DUF4118) CNQ55_RS18225 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS18225 PF13492 GAF domain CNQ55_RS18225 PF02702 Osmosensitive K+ channel His kinase sensor domain CNQ55_RS18230 PF00486 Transcriptional regulatory protein, C terminal CNQ55_RS18230 PF00072 Response regulator receiver domain CNQ55_RS18240 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CNQ55_RS18240 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CNQ55_RS18240 PF01276 Orn/Lys/Arg decarboxylase, major domain CNQ55_RS18245 PF13520 Amino acid permease CNQ55_RS18250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CNQ55_RS18250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CNQ55_RS18250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CNQ55_RS18250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CNQ55_RS18255 PF03925 SeqA protein C-terminal domain CNQ55_RS18255 PF17206 SeqA protein N-terminal domain CNQ55_RS18260 PF12697 Alpha/beta hydrolase family CNQ55_RS18265 PF01402 Ribbon-helix-helix protein, copG family CNQ55_RS18270 PF00258 Flavodoxin CNQ55_RS18280 PF01475 Ferric uptake regulator family CNQ55_RS18285 PF13982 YbfN-like lipoprotein CNQ55_RS18290 PF03573 outer membrane porin, OprD family CNQ55_RS18295 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CNQ55_RS18295 PF00749 tRNA synthetases class I (E and Q), catalytic domain CNQ55_RS18300 PF08220 DeoR-like helix-turn-helix domain CNQ55_RS18300 PF00455 DeoR C terminal sensor domain CNQ55_RS18305 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CNQ55_RS18310 PF17042 Nucleotide-binding C-terminal domain CNQ55_RS18310 PF07005 Sugar-binding N-terminal domain CNQ55_RS18315 PF00465 Iron-containing alcohol dehydrogenase CNQ55_RS18320 PF00701 Dihydrodipicolinate synthetase family CNQ55_RS18325 PF03741 Integral membrane protein TerC family CNQ55_RS18345 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CNQ55_RS18345 PF00367 phosphotransferase system, EIIB CNQ55_RS18345 PF02378 Phosphotransferase system, EIIC CNQ55_RS18350 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CNQ55_RS18355 PF01979 Amidohydrolase family CNQ55_RS18360 PF00480 ROK family CNQ55_RS18360 PF01047 MarR family CNQ55_RS18365 PF13344 Haloacid dehalogenase-like hydrolase CNQ55_RS18375 PF13537 Glutamine amidotransferase domain CNQ55_RS18375 PF00733 Asparagine synthase CNQ55_RS18420 PF01494 FAD binding domain CNQ55_RS18425 PF04055 Radical SAM superfamily CNQ55_RS18425 PF00919 Uncharacterized protein family UPF0004 CNQ55_RS18425 PF01938 TRAM domain CNQ55_RS18430 PF02562 PhoH-like protein CNQ55_RS18435 PF02130 Uncharacterized protein family UPF0054 CNQ55_RS18440 PF03471 Transporter associated domain CNQ55_RS18440 PF00571 CBS domain CNQ55_RS18445 PF00795 Carbon-nitrogen hydrolase CNQ55_RS18450 PF01694 Rhomboid family CNQ55_RS18455 PF00497 Bacterial extracellular solute-binding proteins, family 3 CNQ55_RS18460 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS18465 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS18470 PF00005 ABC transporter CNQ55_RS18475 PF01156 Inosine-uridine preferring nucleoside hydrolase CNQ55_RS18480 PF07295 Zinc-ribbon containing domain CNQ55_RS18485 PF08264 Anticodon-binding domain of tRNA CNQ55_RS18485 PF00133 tRNA synthetases class I (I, L, M and V) CNQ55_RS18485 PF13603 Leucyl-tRNA synthetase, Domain 2 CNQ55_RS18490 PF04390 Lipopolysaccharide-assembly CNQ55_RS18495 PF06144 DNA polymerase III, delta subunit CNQ55_RS18495 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CNQ55_RS18500 PF01467 Cytidylyltransferase-like CNQ55_RS18505 PF00300 Histidine phosphatase superfamily (branch 1) CNQ55_RS18515 PF02590 Predicted SPOUT methyltransferase CNQ55_RS18520 PF03717 Penicillin-binding Protein dimerisation domain CNQ55_RS18520 PF00905 Penicillin binding protein transpeptidase domain CNQ55_RS18525 PF01098 Cell cycle protein CNQ55_RS18530 PF03330 Lytic transglycolase CNQ55_RS18530 PF05036 Sporulation related domain CNQ55_RS18535 PF07943 Penicillin-binding protein 5, C-terminal domain CNQ55_RS18535 PF00768 D-alanyl-D-alanine carboxypeptidase CNQ55_RS18540 PF04359 Protein of unknown function (DUF493) CNQ55_RS18545 PF03099 Biotin/lipoate A/B protein ligase family CNQ55_RS18555 PF03466 LysR substrate binding domain CNQ55_RS18555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS18565 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CNQ55_RS18565 PF04055 Radical SAM superfamily CNQ55_RS18570 PF02416 mttA/Hcf106 family CNQ55_RS18575 PF00795 Carbon-nitrogen hydrolase CNQ55_RS18580 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CNQ55_RS18585 PF00313 'Cold-shock' DNA-binding domain CNQ55_RS18590 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CNQ55_RS18600 PF03606 C4-dicarboxylate anaerobic carrier CNQ55_RS18605 PF00072 Response regulator receiver domain CNQ55_RS18605 PF12431 Transcriptional regulator CNQ55_RS18610 PF00989 PAS fold CNQ55_RS18610 PF17203 Single cache domain 3 CNQ55_RS18610 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CNQ55_RS18610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS18615 PF08218 Citrate lyase ligase C-terminal domain CNQ55_RS18620 PF06857 Malonate decarboxylase delta subunit (MdcD) CNQ55_RS18625 PF03328 HpcH/HpaI aldolase/citrate lyase family CNQ55_RS18630 PF04223 Citrate lyase, alpha subunit (CitF) CNQ55_RS18635 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CNQ55_RS18640 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CNQ55_RS18645 PF00939 Sodium:sulfate symporter transmembrane region CNQ55_RS18650 PF00445 Ribonuclease T2 family CNQ55_RS18660 PF14760 Rnk N-terminus CNQ55_RS18660 PF01272 Transcription elongation factor, GreA/GreB, C-term CNQ55_RS18665 PF00582 Universal stress protein family CNQ55_RS18670 PF13192 Thioredoxin domain CNQ55_RS18670 PF07992 Pyridine nucleotide-disulphide oxidoreductase CNQ55_RS18675 PF10417 C-terminal domain of 1-Cys peroxiredoxin CNQ55_RS18675 PF00578 AhpC/TSA family CNQ55_RS18680 PF13098 Thioredoxin-like domain CNQ55_RS18685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS18685 PF03466 LysR substrate binding domain CNQ55_RS18695 PF02195 ParB-like nuclease domain CNQ55_RS18700 PF00155 Aminotransferase class I and II CNQ55_RS18705 PF00465 Iron-containing alcohol dehydrogenase CNQ55_RS18710 PF04328 Selenoprotein, putative CNQ55_RS18715 PF02554 Carbon starvation protein CstA CNQ55_RS18715 PF13722 5TM C-terminal transporter carbon starvation CstA CNQ55_RS18720 PF03061 Thioesterase superfamily CNQ55_RS18730 PF00550 Phosphopantetheine attachment site CNQ55_RS18730 PF00857 Isochorismatase family CNQ55_RS18735 PF00501 AMP-binding enzyme CNQ55_RS18735 PF13193 AMP-binding enzyme C-terminal domain CNQ55_RS18740 PF00425 chorismate binding enzyme CNQ55_RS18745 PF01497 Periplasmic binding protein CNQ55_RS18750 PF05977 Transmembrane secretion effector CNQ55_RS18755 PF01032 FecCD transport family CNQ55_RS18760 PF01032 FecCD transport family CNQ55_RS18765 PF00005 ABC transporter CNQ55_RS18770 PF02706 Chain length determinant protein CNQ55_RS18775 PF00550 Phosphopantetheine attachment site CNQ55_RS18775 PF00975 Thioesterase domain CNQ55_RS18775 PF00501 AMP-binding enzyme CNQ55_RS18775 PF00668 Condensation domain CNQ55_RS18775 PF13193 AMP-binding enzyme C-terminal domain CNQ55_RS18780 PF03621 MbtH-like protein CNQ55_RS18785 PF00756 Putative esterase CNQ55_RS18785 PF11806 Domain of unknown function (DUF3327) CNQ55_RS18790 PF07715 TonB-dependent Receptor Plug Domain CNQ55_RS18790 PF00593 TonB dependent receptor CNQ55_RS18795 PF01648 4'-phosphopantetheinyl transferase superfamily CNQ55_RS18795 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CNQ55_RS18800 PF01848 Hok/gef family CNQ55_RS18815 PF04107 Glutamate-cysteine ligase family 2(GCS2) CNQ55_RS18820 PF06643 Protein of unknown function (DUF1158) CNQ55_RS18825 PF04237 YjbR CNQ55_RS18830 PF00881 Nitroreductase family CNQ55_RS18835 PF00924 Mechanosensitive ion channel CNQ55_RS18840 PF00324 Amino acid permease CNQ55_RS18845 PF00873 AcrB/AcrD/AcrF family CNQ55_RS18850 PF00529 HlyD membrane-fusion protein of T1SS CNQ55_RS18850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CNQ55_RS18855 PF11604 Copper binding periplasmic protein CusF CNQ55_RS18860 PF02321 Outer membrane efflux protein CNQ55_RS18870 PF00486 Transcriptional regulatory protein, C terminal CNQ55_RS18870 PF00072 Response regulator receiver domain CNQ55_RS18875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS18875 PF00672 HAMP domain CNQ55_RS18875 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS18880 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CNQ55_RS18880 PF13632 Glycosyl transferase family group 2 CNQ55_RS18885 PF13283 Bacteriophage N adsorption protein A C-term CNQ55_RS18890 PF14488 Domain of unknown function (DUF4434) CNQ55_RS18895 PF01278 Omptin family CNQ55_RS18900 PF08242 Methyltransferase domain CNQ55_RS18930 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CNQ55_RS18930 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CNQ55_RS18940 PF04307 LexA-binding, inner membrane-associated putative hydrolase CNQ55_RS18945 PF01406 tRNA synthetases class I (C) catalytic domain CNQ55_RS18945 PF09190 DALR domain CNQ55_RS18950 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CNQ55_RS18955 PF12850 Calcineurin-like phosphoesterase superfamily domain CNQ55_RS18970 PF00731 AIR carboxylase CNQ55_RS18975 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CNQ55_RS18975 PF02222 ATP-grasp domain CNQ55_RS18985 PF11392 Protein of unknown function (DUF2877) CNQ55_RS18990 PF06545 Protein of unknown function (DUF1116) CNQ55_RS18995 PF00549 CoA-ligase CNQ55_RS18995 PF02629 CoA binding domain CNQ55_RS19000 PF02615 Malate/L-lactate dehydrogenase CNQ55_RS19005 PF01546 Peptidase family M20/M25/M40 CNQ55_RS19010 PF05899 Protein of unknown function (DUF861) CNQ55_RS19010 PF07883 Cupin domain CNQ55_RS19015 PF02595 Glycerate kinase family CNQ55_RS19020 PF00860 Permease family CNQ55_RS19025 PF01979 Amidohydrolase family CNQ55_RS19030 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CNQ55_RS19035 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CNQ55_RS19035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CNQ55_RS19040 PF01261 Xylose isomerase-like TIM barrel CNQ55_RS19045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CNQ55_RS19045 PF00205 Thiamine pyrophosphate enzyme, central domain CNQ55_RS19045 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CNQ55_RS19050 PF09339 IclR helix-turn-helix domain CNQ55_RS19050 PF01614 Bacterial transcriptional regulator CNQ55_RS19055 PF04115 Ureidoglycolate lyase CNQ55_RS19060 PF03466 LysR substrate binding domain CNQ55_RS19060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS19075 PF00005 ABC transporter CNQ55_RS19080 PF13472 GDSL-like Lipase/Acylhydrolase family CNQ55_RS19085 PF00106 short chain dehydrogenase CNQ55_RS19090 PF00085 Thioredoxin CNQ55_RS19095 PF03649 Uncharacterised protein family (UPF0014) CNQ55_RS19100 PF00005 ABC transporter CNQ55_RS19105 PF01145 SPFH domain / Band 7 family CNQ55_RS19105 PF16200 C-terminal region of band_7 CNQ55_RS19110 PF01957 NfeD-like C-terminal, partner-binding CNQ55_RS19120 PF13411 MerR HTH family regulatory protein CNQ55_RS19125 PF13520 Amino acid permease CNQ55_RS19130 PF04960 Glutaminase CNQ55_RS19135 PF00403 Heavy-metal-associated domain CNQ55_RS19140 PF01381 Helix-turn-helix CNQ55_RS19145 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB CNQ55_RS19150 PF01963 TraB family CNQ55_RS19160 PF04073 Aminoacyl-tRNA editing domain CNQ55_RS19175 PF02872 5'-nucleotidase, C-terminal domain CNQ55_RS19175 PF00149 Calcineurin-like phosphoesterase CNQ55_RS19185 PF07690 Major Facilitator Superfamily CNQ55_RS19190 PF00999 Sodium/hydrogen exchanger family CNQ55_RS19190 PF02254 TrkA-N domain CNQ55_RS19195 PF00294 pfkB family carbohydrate kinase CNQ55_RS19200 PF07859 alpha/beta hydrolase fold CNQ55_RS19205 PF00762 Ferrochelatase CNQ55_RS19210 PF05191 Adenylate kinase, active site lid CNQ55_RS19220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS19220 PF00183 Hsp90 protein CNQ55_RS19225 PF02132 RecR protein CNQ55_RS19225 PF13662 Toprim domain CNQ55_RS19230 PF02575 YbaB/EbfC DNA-binding family CNQ55_RS19235 PF12170 DNA polymerase III tau subunit V interacting with alpha CNQ55_RS19235 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CNQ55_RS19235 PF12169 DNA polymerase III subunits gamma and tau domain III CNQ55_RS19240 PF00156 Phosphoribosyl transferase domain CNQ55_RS19250 PF04304 Protein of unknown function (DUF454) CNQ55_RS19255 PF07445 Primosomal replication protein priC CNQ55_RS19260 PF10689 Protein of unknown function (DUF2496) CNQ55_RS19265 PF12795 Mechanosensitive ion channel porin domain CNQ55_RS19265 PF00924 Mechanosensitive ion channel CNQ55_RS19265 PF12794 Mechanosensitive ion channel inner membrane domain 1 CNQ55_RS19275 PF00440 Bacterial regulatory proteins, tetR family CNQ55_RS19275 PF08361 MAATS-type transcriptional repressor, C-terminal region CNQ55_RS19280 PF00529 HlyD membrane-fusion protein of T1SS CNQ55_RS19280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CNQ55_RS19285 PF00873 AcrB/AcrD/AcrF family CNQ55_RS19290 PF10757 Biofilm formation regulator YbaJ CNQ55_RS19295 PF05321 Haemolysin expression modulating protein CNQ55_RS19300 PF14602 Hexapeptide repeat of succinyl-transferase CNQ55_RS19300 PF12464 Maltose acetyltransferase CNQ55_RS19305 PF10777 Inner membrane protein YlaC CNQ55_RS19310 PF12792 CSS motif domain associated with EAL CNQ55_RS19310 PF00563 EAL domain CNQ55_RS19315 PF07237 Protein of unknown function (DUF1428) CNQ55_RS19325 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CNQ55_RS19330 PF09619 Type III secretion system lipoprotein chaperone (YscW) CNQ55_RS19340 PF00909 Ammonium Transporter Family CNQ55_RS19345 PF00543 Nitrogen regulatory protein P-II CNQ55_RS19350 PF00664 ABC transporter transmembrane region CNQ55_RS19350 PF00005 ABC transporter CNQ55_RS19355 PF00005 ABC transporter CNQ55_RS19355 PF00664 ABC transporter transmembrane region CNQ55_RS19360 PF01037 Lrp/AsnC ligand binding domain CNQ55_RS19360 PF13404 AsnC-type helix-turn-helix domain CNQ55_RS19370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CNQ55_RS19370 PF12793 Sugar transport-related sRNA regulator N-term CNQ55_RS19375 PF06508 Queuosine biosynthesis protein QueC CNQ55_RS19390 PF13145 PPIC-type PPIASE domain CNQ55_RS19395 PF00216 Bacterial DNA-binding protein CNQ55_RS19400 PF02190 ATP-dependent protease La (LON) substrate-binding domain CNQ55_RS19400 PF05362 Lon protease (S16) C-terminal proteolytic domain CNQ55_RS19400 PF00004 ATPase family associated with various cellular activities (AAA) CNQ55_RS19405 PF06689 ClpX C4-type zinc finger CNQ55_RS19405 PF10431 C-terminal, D2-small domain, of ClpB protein CNQ55_RS19405 PF07724 AAA domain (Cdc48 subfamily) CNQ55_RS19410 PF00574 Clp protease CNQ55_RS19415 PF05697 Bacterial trigger factor protein (TF) CNQ55_RS19415 PF05698 Bacterial trigger factor protein (TF) C-terminus CNQ55_RS19415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CNQ55_RS19425 PF01722 BolA-like protein CNQ55_RS19435 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CNQ55_RS19435 PF03923 Uncharacterized lipoprotein CNQ55_RS19440 PF07690 Major Facilitator Superfamily CNQ55_RS19445 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CNQ55_RS19445 PF06481 COX Aromatic Rich Motif CNQ55_RS19450 PF00115 Cytochrome C and Quinol oxidase polypeptide I CNQ55_RS19455 PF00510 Cytochrome c oxidase subunit III CNQ55_RS19460 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CNQ55_RS19465 PF01040 UbiA prenyltransferase family CNQ55_RS19470 PF07690 Major Facilitator Superfamily CNQ55_RS19475 PF04461 Protein of unknown function (DUF520) CNQ55_RS19480 PF08546 Ketopantoate reductase PanE/ApbA C terminal CNQ55_RS19480 PF02558 Ketopantoate reductase PanE/ApbA CNQ55_RS19485 PF01965 DJ-1/PfpI family CNQ55_RS19490 PF02568 Thiamine biosynthesis protein (ThiI) CNQ55_RS19490 PF02926 THUMP domain CNQ55_RS19495 PF02609 Exonuclease VII small subunit CNQ55_RS19500 PF00348 Polyprenyl synthetase CNQ55_RS19505 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CNQ55_RS19505 PF02779 Transketolase, pyrimidine binding domain CNQ55_RS19505 PF02780 Transketolase, C-terminal domain CNQ55_RS19510 PF00248 Aldo/keto reductase family CNQ55_RS19515 PF04608 Phosphatidylglycerophosphatase A CNQ55_RS19520 PF00586 AIR synthase related protein, N-terminal domain CNQ55_RS19520 PF02769 AIR synthase related protein, C-terminal domain CNQ55_RS19525 PF01029 NusB family CNQ55_RS19530 PF00885 6,7-dimethyl-8-ribityllumazine synthase CNQ55_RS19535 PF01872 RibD C-terminal domain CNQ55_RS19535 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CNQ55_RS19540 PF03477 ATP cone domain CNQ55_RS19545 PF11622 Protein of unknown function (DUF3251) CNQ55_RS19550 PF03502 Nucleoside-specific channel-forming protein, Tsx CNQ55_RS19555 PF01844 HNH endonuclease CNQ55_RS19560 PF07549 SecD/SecF GG Motif CNQ55_RS19560 PF02355 Protein export membrane protein CNQ55_RS19565 PF02355 Protein export membrane protein CNQ55_RS19565 PF07549 SecD/SecF GG Motif CNQ55_RS19565 PF13721 SecD export protein N-terminal TM region CNQ55_RS19570 PF02699 Preprotein translocase subunit CNQ55_RS19575 PF01702 Queuine tRNA-ribosyltransferase CNQ55_RS19580 PF02547 Queuosine biosynthesis protein CNQ55_RS19585 PF04336 Acyl carrier protein phosphodiesterase CNQ55_RS19590 PF00128 Alpha amylase, catalytic domain CNQ55_RS19590 PF02903 Alpha amylase, N-terminal ig-like domain CNQ55_RS19595 PF00324 Amino acid permease CNQ55_RS19600 PF05525 Branched-chain amino acid transport protein CNQ55_RS19605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS19605 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS19605 PF11808 Phosphate regulon sensor protein PhoR CNQ55_RS19605 PF00989 PAS fold CNQ55_RS19610 PF00486 Transcriptional regulatory protein, C terminal CNQ55_RS19610 PF00072 Response regulator receiver domain CNQ55_RS19615 PF00149 Calcineurin-like phosphoesterase CNQ55_RS19615 PF12320 Type 5 capsule protein repressor C-terminal domain CNQ55_RS19620 PF13476 AAA domain CNQ55_RS19625 PF07690 Major Facilitator Superfamily CNQ55_RS19630 PF00480 ROK family CNQ55_RS19635 PF04381 Putative exonuclease, RdgC CNQ55_RS19640 PF10971 Protein of unknown function (DUF2773) CNQ55_RS19650 PF06865 Pyrimidine/purine nucleoside phosphorylase CNQ55_RS19655 PF07302 AroM protein CNQ55_RS19665 PF16362 YaiA protein CNQ55_RS19670 PF01202 Shikimate kinase CNQ55_RS19675 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CNQ55_RS19680 PF14748 Pyrroline-5-carboxylate reductase dimerisation CNQ55_RS19680 PF03807 NADP oxidoreductase coenzyme F420-dependent CNQ55_RS19685 PF05230 MASE2 domain CNQ55_RS19685 PF00990 Diguanylate cyclase, GGDEF domain CNQ55_RS19690 PF07769 psiF repeat CNQ55_RS19695 PF00245 Alkaline phosphatase CNQ55_RS19700 PF10796 Sigma-S stabilisation anti-adaptor protein CNQ55_RS19705 PF07478 D-ala D-ala ligase C-terminus CNQ55_RS19705 PF01820 D-ala D-ala ligase N-terminus CNQ55_RS19710 PF10953 Protein of unknown function (DUF2754) CNQ55_RS19715 PF10954 Protein of unknown function (DUF2755) CNQ55_RS19720 PF07759 Protein of unknown function (DUF1615) CNQ55_RS19725 PF05992 SbmA/BacA-like family CNQ55_RS19735 PF00144 Beta-lactamase CNQ55_RS19740 PF15977 Winged helix-turn-helix DNA binding CNQ55_RS19745 PF03797 Autotransporter beta-domain CNQ55_RS19745 PF03212 Pertactin CNQ55_RS19750 PF00490 Delta-aminolevulinic acid dehydratase CNQ55_RS19755 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CNQ55_RS19760 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS19765 PF00005 ABC transporter CNQ55_RS19770 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CNQ55_RS19780 PF02585 GlcNAc-PI de-N-acetylase CNQ55_RS19785 PF00535 Glycosyl transferase family 2 CNQ55_RS19790 PF00132 Bacterial transferase hexapeptide (six repeats) CNQ55_RS19800 PF02583 Metal-sensitive transcriptional repressor CNQ55_RS19805 PF00107 Zinc-binding dehydrogenase CNQ55_RS19805 PF08240 Alcohol dehydrogenase GroES-like domain CNQ55_RS19810 PF00756 Putative esterase CNQ55_RS19815 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CNQ55_RS19825 PF00356 Bacterial regulatory proteins, lacI family CNQ55_RS19835 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CNQ55_RS19835 PF02837 Glycosyl hydrolases family 2, sugar binding domain CNQ55_RS19835 PF02929 Beta galactosidase small chain CNQ55_RS19835 PF16353 Domain of unknown function(DUF4981) CNQ55_RS19835 PF00703 Glycosyl hydrolases family 2 CNQ55_RS19840 PF01306 LacY proton/sugar symporter CNQ55_RS19845 PF12464 Maltose acetyltransferase CNQ55_RS19845 PF00132 Bacterial transferase hexapeptide (six repeats) CNQ55_RS19855 PF13333 Integrase core domain CNQ55_RS19855 PF00665 Integrase core domain CNQ55_RS19855 PF13276 HTH-like domain CNQ55_RS19860 PF07969 Amidohydrolase family CNQ55_RS19865 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CNQ55_RS19870 PF13193 AMP-binding enzyme C-terminal domain CNQ55_RS19870 PF00501 AMP-binding enzyme CNQ55_RS19870 PF16177 Acetyl-coenzyme A synthetase N-terminus CNQ55_RS19875 PF03972 MmgE/PrpD family CNQ55_RS19880 PF00285 Citrate synthase, C-terminal domain CNQ55_RS19890 PF06506 Propionate catabolism activator CNQ55_RS19890 PF02954 Bacterial regulatory protein, Fis family CNQ55_RS19890 PF00158 Sigma-54 interaction domain CNQ55_RS19895 PF07338 Protein of unknown function (DUF1471) CNQ55_RS19900 PF01810 LysE type translocator CNQ55_RS19910 PF08240 Alcohol dehydrogenase GroES-like domain CNQ55_RS19910 PF00107 Zinc-binding dehydrogenase CNQ55_RS19915 PF07969 Amidohydrolase family CNQ55_RS19920 PF00696 Amino acid kinase family CNQ55_RS19925 PF06545 Protein of unknown function (DUF1116) CNQ55_RS19930 PF00549 CoA-ligase CNQ55_RS19930 PF02629 CoA binding domain CNQ55_RS19935 PF11392 Protein of unknown function (DUF2877) CNQ55_RS19940 PF12796 Ankyrin repeats (3 copies) CNQ55_RS19950 PF06496 Protein of unknown function (DUF1097) CNQ55_RS19955 PF03466 LysR substrate binding domain CNQ55_RS19955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS19960 PF00196 Bacterial regulatory proteins, luxR family CNQ55_RS19960 PF00563 EAL domain CNQ55_RS19970 PF02028 BCCT, betaine/carnitine/choline family transporter CNQ55_RS19980 PF00440 Bacterial regulatory proteins, tetR family CNQ55_RS19980 PF13977 BetI-type transcriptional repressor, C-terminal CNQ55_RS19985 PF00171 Aldehyde dehydrogenase family CNQ55_RS19990 PF05199 GMC oxidoreductase CNQ55_RS19990 PF00732 GMC oxidoreductase CNQ55_RS20010 PF00196 Bacterial regulatory proteins, luxR family CNQ55_RS20010 PF00563 EAL domain CNQ55_RS20025 PF03797 Autotransporter beta-domain CNQ55_RS20025 PF03212 Pertactin CNQ55_RS20045 PF02589 LUD domain CNQ55_RS20050 PF13183 4Fe-4S dicluster domain CNQ55_RS20050 PF11870 Domain of unknown function (DUF3390) CNQ55_RS20050 PF02589 LUD domain CNQ55_RS20055 PF02754 Cysteine-rich domain CNQ55_RS20060 PF12852 Cupin CNQ55_RS20060 PF12833 Helix-turn-helix domain CNQ55_RS20065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CNQ55_RS20065 PF07992 Pyridine nucleotide-disulphide oxidoreductase CNQ55_RS20070 PF07338 Protein of unknown function (DUF1471) CNQ55_RS20075 PF04224 Protein of unknown function, DUF417 CNQ55_RS20080 PF00248 Aldo/keto reductase family CNQ55_RS20085 PF12833 Helix-turn-helix domain CNQ55_RS20090 PF09134 Invasin, domain 3 CNQ55_RS20090 PF02369 Bacterial Ig-like domain (group 1) CNQ55_RS20090 PF11924 Inverse autotransporter, beta-domain CNQ55_RS20095 PF00248 Aldo/keto reductase family CNQ55_RS20100 PF00248 Aldo/keto reductase family CNQ55_RS20105 PF03466 LysR substrate binding domain CNQ55_RS20105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS20110 PF03466 LysR substrate binding domain CNQ55_RS20110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS20115 PF12146 Serine aminopeptidase, S33 CNQ55_RS20120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CNQ55_RS20135 PF01197 Ribosomal protein L31 CNQ55_RS20140 PF00444 Ribosomal protein L36 CNQ55_RS20155 PF00196 Bacterial regulatory proteins, luxR family CNQ55_RS20160 PF16449 Fimbrillin MatB CNQ55_RS20165 PF18649 EcpB C-terminal domain CNQ55_RS20185 PF03692 Putative zinc- or iron-chelating domain CNQ55_RS20195 PF07274 Protein of unknown function (DUF1440) CNQ55_RS20215 PF03797 Autotransporter beta-domain CNQ55_RS20215 PF02395 Immunoglobulin A1 protease CNQ55_RS20220 PF01047 MarR family CNQ55_RS20225 PF13356 Arm DNA-binding domain CNQ55_RS20225 PF00589 Phage integrase family CNQ55_RS20250 PF06755 CbtA_toxin of type IV toxin-antitoxin system CNQ55_RS20255 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A CNQ55_RS20260 PF06174 Protein of unknown function (DUF987) CNQ55_RS20265 PF04002 RadC-like JAB domain CNQ55_RS20270 PF03230 Antirestriction protein CNQ55_RS20275 PF06067 Domain of unknown function (DUF932) CNQ55_RS20285 PF03797 Autotransporter beta-domain CNQ55_RS20285 PF13018 Extended Signal Peptide of Type V secretion system CNQ55_RS20285 PF16168 Adhesin of bacterial autotransporter system, probable stalk CNQ55_RS20310 PF13520 Amino acid permease CNQ55_RS20325 PF01336 OB-fold nucleic acid binding domain CNQ55_RS20325 PF00152 tRNA synthetases class II (D, K and N) CNQ55_RS20330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS20330 PF03466 LysR substrate binding domain CNQ55_RS20345 PF05717 IS66 Orf2 like protein CNQ55_RS20355 PF01695 IstB-like ATP binding protein CNQ55_RS20375 PF02492 CobW/HypB/UreG, nucleotide-binding domain CNQ55_RS20375 PF07683 Cobalamin synthesis protein cobW C-terminal domain CNQ55_RS20385 PF07715 TonB-dependent Receptor Plug Domain CNQ55_RS20385 PF00593 TonB dependent receptor CNQ55_RS20430 PF06722 Protein of unknown function (DUF1205) CNQ55_RS20435 PF00005 ABC transporter CNQ55_RS20435 PF00664 ABC transporter transmembrane region CNQ55_RS20440 PF11806 Domain of unknown function (DUF3327) CNQ55_RS20440 PF00756 Putative esterase CNQ55_RS20445 PF00756 Putative esterase CNQ55_RS20455 PF01047 MarR family CNQ55_RS20470 PF00419 Fimbrial protein CNQ55_RS20470 PF09160 FimH, mannose binding CNQ55_RS20475 PF00419 Fimbrial protein CNQ55_RS20480 PF00419 Fimbrial protein CNQ55_RS20485 PF13953 PapC C-terminal domain CNQ55_RS20485 PF13954 PapC N-terminal domain CNQ55_RS20485 PF00577 Outer membrane usher protein CNQ55_RS20490 PF02753 Pili assembly chaperone PapD, C-terminal domain CNQ55_RS20490 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CNQ55_RS20495 PF00419 Fimbrial protein CNQ55_RS20500 PF00419 Fimbrial protein CNQ55_RS20505 PF03333 Adhesin biosynthesis transcription regulatory protein CNQ55_RS20510 PF04703 FaeA-like protein CNQ55_RS20535 PF02517 CPBP intramembrane metalloprotease CNQ55_RS20570 PF00793 DAHP synthetase I family CNQ55_RS20580 PF01526 Tn3 transposase DDE domain CNQ55_RS20580 PF13700 Domain of unknown function (DUF4158) CNQ55_RS20590 PF07693 KAP family P-loop domain CNQ55_RS20610 PF13148 Protein of unknown function (DUF3987) CNQ55_RS20640 PF00171 Aldehyde dehydrogenase family CNQ55_RS20645 PF01472 PUA domain CNQ55_RS20645 PF00696 Amino acid kinase family CNQ55_RS20650 PF00267 Gram-negative porin CNQ55_RS20655 PF07417 Sigma factor-binding transcriptional regulator Crl CNQ55_RS20660 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) CNQ55_RS20665 PF00156 Phosphoribosyl transferase domain CNQ55_RS20670 PF07687 Peptidase dimerisation domain CNQ55_RS20670 PF01546 Peptidase family M20/M25/M40 CNQ55_RS20675 PF00472 RF-1 domain CNQ55_RS20685 PF13673 Acetyltransferase (GNAT) domain CNQ55_RS20700 PF11798 IMS family HHH motif CNQ55_RS20700 PF11799 impB/mucB/samB family C-terminal domain CNQ55_RS20700 PF00817 impB/mucB/samB family CNQ55_RS20705 PF00691 OmpA family CNQ55_RS20705 PF13677 Membrane MotB of proton-channel complex MotA/MotB CNQ55_RS20710 PF00771 FHIPEP family CNQ55_RS20720 PF00877 NlpC/P60 family CNQ55_RS20725 PF03734 L,D-transpeptidase catalytic domain CNQ55_RS20730 PF13230 Glutamine amidotransferases class-II CNQ55_RS20735 PF13580 SIS domain CNQ55_RS20740 PF02770 Acyl-CoA dehydrogenase, middle domain CNQ55_RS20740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CNQ55_RS20740 PF09317 Domain of unknown function (DUF1974) CNQ55_RS20740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CNQ55_RS20750 PF00795 Carbon-nitrogen hydrolase CNQ55_RS20790 PF04717 Type VI secretion system, phage-baseplate injector CNQ55_RS20795 PF05638 Type VI secretion system effector, Hcp CNQ55_RS20805 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CNQ55_RS20835 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CNQ55_RS20845 PF10431 C-terminal, D2-small domain, of ClpB protein CNQ55_RS20845 PF17871 AAA lid domain CNQ55_RS20845 PF07724 AAA domain (Cdc48 subfamily) CNQ55_RS20845 PF00004 ATPase family associated with various cellular activities (AAA) CNQ55_RS20860 PF06761 Intracellular multiplication and human macrophage-killing CNQ55_RS20860 PF06744 Type VI secretion protein IcmF C-terminal CNQ55_RS20860 PF14331 ImcF-related N-terminal domain CNQ55_RS20885 PF00929 Exonuclease CNQ55_RS20890 PF00075 RNase H CNQ55_RS20895 PF08241 Methyltransferase domain CNQ55_RS20900 PF16123 Hydroxyacylglutathione hydrolase C-terminus CNQ55_RS20900 PF00753 Metallo-beta-lactamase superfamily CNQ55_RS20905 PF01476 LysM domain CNQ55_RS20905 PF01464 Transglycosylase SLT domain CNQ55_RS20910 PF08241 Methyltransferase domain CNQ55_RS20915 PF03372 Endonuclease/Exonuclease/phosphatase family CNQ55_RS20920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS20920 PF03466 LysR substrate binding domain CNQ55_RS20925 PF00248 Aldo/keto reductase family CNQ55_RS20965 PF00005 ABC transporter CNQ55_RS20965 PF09383 NIL domain CNQ55_RS20970 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS20975 PF03180 NLPA lipoprotein CNQ55_RS20980 PF16358 RcsF lipoprotein CNQ55_RS20985 PF01980 tRNA-methyltransferase O CNQ55_RS20985 PF18389 TrmO C-terminal domain CNQ55_RS20990 PF03129 Anticodon binding domain CNQ55_RS20990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CNQ55_RS20990 PF04073 Aminoacyl-tRNA editing domain CNQ55_RS20995 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CNQ55_RS21000 PF17185 NlpE C-terminal OB domain CNQ55_RS21000 PF04170 NlpE N-terminal domain CNQ55_RS21005 PF00472 RF-1 domain CNQ55_RS21010 PF07152 YaeQ protein CNQ55_RS21015 PF06786 Uncharacterised protein family (UPF0253) CNQ55_RS21020 PF07073 Modulator of Rho-dependent transcription termination (ROF) CNQ55_RS21025 PF11734 TilS substrate C-terminal domain CNQ55_RS21025 PF01171 PP-loop family CNQ55_RS21025 PF09179 TilS substrate binding domain CNQ55_RS21030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CNQ55_RS21035 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CNQ55_RS21035 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CNQ55_RS21035 PF01276 Orn/Lys/Arg decarboxylase, major domain CNQ55_RS21040 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CNQ55_RS21045 PF07733 Bacterial DNA polymerase III alpha NTPase domain CNQ55_RS21045 PF01336 OB-fold nucleic acid binding domain CNQ55_RS21045 PF02811 PHP domain CNQ55_RS21045 PF14579 Helix-hairpin-helix motif CNQ55_RS21045 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CNQ55_RS21050 PF01351 Ribonuclease HII CNQ55_RS21055 PF02684 Lipid-A-disaccharide synthetase CNQ55_RS21060 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CNQ55_RS21060 PF00132 Bacterial transferase hexapeptide (six repeats) CNQ55_RS21065 PF07977 FabA-like domain CNQ55_RS21070 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CNQ55_RS21070 PF00132 Bacterial transferase hexapeptide (six repeats) CNQ55_RS21075 PF03938 Outer membrane protein (OmpH-like) CNQ55_RS21080 PF01103 Surface antigen CNQ55_RS21080 PF07244 Surface antigen variable number repeat CNQ55_RS21085 PF02163 Peptidase family M50 CNQ55_RS21085 PF17820 PDZ domain CNQ55_RS21095 PF01255 Putative undecaprenyl diphosphate synthase CNQ55_RS21100 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CNQ55_RS21100 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CNQ55_RS21100 PF13288 DXP reductoisomerase C-terminal domain CNQ55_RS21105 PF01765 Ribosome recycling factor CNQ55_RS21110 PF00696 Amino acid kinase family CNQ55_RS21115 PF00889 Elongation factor TS CNQ55_RS21120 PF00318 Ribosomal protein S2 CNQ55_RS21130 PF00557 Metallopeptidase family M24 CNQ55_RS21135 PF01909 Nucleotidyltransferase domain CNQ55_RS21135 PF08335 GlnD PII-uridylyltransferase CNQ55_RS21135 PF01842 ACT domain CNQ55_RS21135 PF01966 HD domain CNQ55_RS21140 PF14602 Hexapeptide repeat of succinyl-transferase CNQ55_RS21140 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CNQ55_RS21140 PF00132 Bacterial transferase hexapeptide (six repeats) CNQ55_RS21145 PF11944 Protein of unknown function (DUF3461) CNQ55_RS21150 PF05651 Putative sugar diacid recognition CNQ55_RS21150 PF13556 PucR C-terminal helix-turn-helix domain CNQ55_RS21150 PF17853 GGDEF-like domain CNQ55_RS21155 PF00595 PDZ domain CNQ55_RS21165 PF01966 HD domain CNQ55_RS21170 PF01048 Phosphorylase superfamily CNQ55_RS21175 PF01497 Periplasmic binding protein CNQ55_RS21180 PF03458 UPF0126 domain CNQ55_RS21185 PF01521 Iron-sulphur cluster biosynthesis CNQ55_RS21190 PF00654 Voltage gated chloride channel CNQ55_RS21195 PF00202 Aminotransferase class-III CNQ55_RS21200 PF01032 FecCD transport family CNQ55_RS21205 PF01497 Periplasmic binding protein CNQ55_RS21210 PF00005 ABC transporter CNQ55_RS21215 PF00593 TonB dependent receptor CNQ55_RS21215 PF07715 TonB-dependent Receptor Plug Domain CNQ55_RS21220 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal CNQ55_RS21220 PF14814 Bifunctional transglycosylase second domain CNQ55_RS21220 PF00912 Transglycosylase CNQ55_RS21220 PF00905 Penicillin binding protein transpeptidase domain CNQ55_RS21225 PF00270 DEAD/DEAH box helicase CNQ55_RS21225 PF08482 ATP-dependent helicase C-terminal CNQ55_RS21225 PF00271 Helicase conserved C-terminal domain CNQ55_RS21225 PF04408 Helicase associated domain (HA2) CNQ55_RS21230 PF02834 LigT like Phosphoesterase CNQ55_RS21235 PF17746 SfsA N-terminal OB domain CNQ55_RS21235 PF03749 Sugar fermentation stimulation protein RE domain CNQ55_RS21240 PF01258 Prokaryotic dksA/traR C4-type zinc finger CNQ55_RS21245 PF00749 tRNA synthetases class I (E and Q), catalytic domain CNQ55_RS21250 PF12626 Polymerase A arginine-rich C-terminus CNQ55_RS21250 PF12627 Probable RNA and SrmB- binding site of polymerase A CNQ55_RS21250 PF01743 Poly A polymerase head domain CNQ55_RS21255 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CNQ55_RS21260 PF00419 Fimbrial protein CNQ55_RS21265 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CNQ55_RS21265 PF02753 Pili assembly chaperone PapD, C-terminal domain CNQ55_RS21270 PF13954 PapC N-terminal domain CNQ55_RS21270 PF13953 PapC C-terminal domain CNQ55_RS21270 PF00577 Outer membrane usher protein CNQ55_RS21275 PF00419 Fimbrial protein CNQ55_RS21280 PF00419 Fimbrial protein CNQ55_RS21285 PF00419 Fimbrial protein CNQ55_RS21290 PF00419 Fimbrial protein CNQ55_RS21295 PF02548 Ketopantoate hydroxymethyltransferase CNQ55_RS21300 PF02569 Pantoate-beta-alanine ligase CNQ55_RS21310 PF04754 Putative transposase, YhgA-like CNQ55_RS21325 PF02261 Aspartate decarboxylase CNQ55_RS21330 PF01522 Polysaccharide deacetylase CNQ55_RS21335 PF03610 PTS system fructose IIA component CNQ55_RS21340 PF01061 ABC-2 type transporter CNQ55_RS21345 PF00005 ABC transporter CNQ55_RS21350 PF00484 Carbonic anhydrase CNQ55_RS21355 PF00156 Phosphoribosyl transferase domain CNQ55_RS21360 PF01011 PQQ enzyme repeat CNQ55_RS21365 PF00394 Multicopper oxidase CNQ55_RS21365 PF07731 Multicopper oxidase CNQ55_RS21365 PF07732 Multicopper oxidase CNQ55_RS21370 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CNQ55_RS21375 PF17284 Spermidine synthase tetramerisation domain CNQ55_RS21380 PF02675 S-adenosylmethionine decarboxylase CNQ55_RS21385 PF06062 Uncharacterised protein family (UPF0231) CNQ55_RS21390 PF06434 Aconitate hydratase 2 N-terminus CNQ55_RS21390 PF00330 Aconitase family (aconitate hydratase) CNQ55_RS21390 PF11791 Aconitate B N-terminal domain CNQ55_RS21405 PF11737 Protein of unknown function (DUF3300) CNQ55_RS21410 PF07992 Pyridine nucleotide-disulphide oxidoreductase CNQ55_RS21410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CNQ55_RS21415 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CNQ55_RS21415 PF02817 e3 binding domain CNQ55_RS21415 PF00364 Biotin-requiring enzyme CNQ55_RS21420 PF00456 Transketolase, thiamine diphosphate binding domain CNQ55_RS21420 PF17831 Pyruvate dehydrogenase E1 component middle domain CNQ55_RS21430 PF00392 Bacterial regulatory proteins, gntR family CNQ55_RS21430 PF07729 FCD domain CNQ55_RS21435 PF01320 Colicin immunity protein / pyocin immunity protein CNQ55_RS21445 PF01320 Colicin immunity protein / pyocin immunity protein CNQ55_RS21455 PF01320 Colicin immunity protein / pyocin immunity protein CNQ55_RS21460 PF05638 Type VI secretion system effector, Hcp CNQ55_RS21465 PF00324 Amino acid permease CNQ55_RS21470 PF17113 Regulatory signalling modulator protein AmpE CNQ55_RS21475 PF01510 N-acetylmuramoyl-L-alanine amidase CNQ55_RS21480 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CNQ55_RS21480 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CNQ55_RS21490 PF07963 Prokaryotic N-terminal methylation motif CNQ55_RS21495 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CNQ55_RS21495 PF00437 Type II/IV secretion system protein CNQ55_RS21500 PF00482 Type II secretion system (T2SS), protein F CNQ55_RS21505 PF00478 IMP dehydrogenase / GMP reductase domain CNQ55_RS21510 PF01121 Dephospho-CoA kinase CNQ55_RS21515 PF07072 Cell division protein CNQ55_RS21520 PF03884 DNA gyrase inhibitor YacG CNQ55_RS21525 PF00293 NUDIX domain CNQ55_RS21530 PF07516 SecA Wing and Scaffold domain CNQ55_RS21530 PF01043 SecA preprotein cross-linking domain CNQ55_RS21530 PF07517 SecA DEAD-like domain CNQ55_RS21530 PF02810 SEC-C motif CNQ55_RS21535 PF06558 Secretion monitor precursor protein (SecM) CNQ55_RS21540 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CNQ55_RS21545 PF12327 FtsZ family, C-terminal domain CNQ55_RS21545 PF00091 Tubulin/FtsZ family, GTPase domain CNQ55_RS21550 PF02491 SHS2 domain inserted in FTSA CNQ55_RS21555 PF08478 POTRA domain, FtsQ-type CNQ55_RS21555 PF03799 Cell division protein FtsQ CNQ55_RS21560 PF01820 D-ala D-ala ligase N-terminus CNQ55_RS21560 PF07478 D-ala D-ala ligase C-terminus CNQ55_RS21565 PF02875 Mur ligase family, glutamate ligase domain CNQ55_RS21565 PF08245 Mur ligase middle domain CNQ55_RS21565 PF01225 Mur ligase family, catalytic domain CNQ55_RS21570 PF04101 Glycosyltransferase family 28 C-terminal domain CNQ55_RS21570 PF03033 Glycosyltransferase family 28 N-terminal domain CNQ55_RS21575 PF01098 Cell cycle protein CNQ55_RS21580 PF02875 Mur ligase family, glutamate ligase domain CNQ55_RS21580 PF08245 Mur ligase middle domain CNQ55_RS21585 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CNQ55_RS21585 PF00953 Glycosyl transferase family 4 CNQ55_RS21590 PF08245 Mur ligase middle domain CNQ55_RS21590 PF02875 Mur ligase family, glutamate ligase domain CNQ55_RS21590 PF01225 Mur ligase family, catalytic domain CNQ55_RS21595 PF08245 Mur ligase middle domain CNQ55_RS21595 PF02875 Mur ligase family, glutamate ligase domain CNQ55_RS21595 PF01225 Mur ligase family, catalytic domain CNQ55_RS21600 PF03717 Penicillin-binding Protein dimerisation domain CNQ55_RS21600 PF00905 Penicillin binding protein transpeptidase domain CNQ55_RS21605 PF04999 Cell division protein FtsL CNQ55_RS21610 PF01795 MraW methylase family CNQ55_RS21615 PF02381 MraZ protein, putative antitoxin-like CNQ55_RS21625 PF00356 Bacterial regulatory proteins, lacI family CNQ55_RS21625 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CNQ55_RS21635 PF10369 Small subunit of acetolactate synthase CNQ55_RS21640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CNQ55_RS21640 PF00205 Thiamine pyrophosphate enzyme, central domain CNQ55_RS21640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CNQ55_RS21645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS21645 PF03466 LysR substrate binding domain CNQ55_RS21650 PF08054 Leucine operon leader peptide CNQ55_RS21655 PF00682 HMGL-like CNQ55_RS21655 PF08502 LeuA allosteric (dimerisation) domain CNQ55_RS21660 PF00180 Isocitrate/isopropylmalate dehydrogenase CNQ55_RS21665 PF00330 Aconitase family (aconitate hydratase) CNQ55_RS21670 PF00694 Aconitase C-terminal domain CNQ55_RS21680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CNQ55_RS21680 PF12793 Sugar transport-related sRNA regulator N-term CNQ55_RS21690 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS21695 PF00005 ABC transporter CNQ55_RS21700 PF09335 SNARE associated Golgi protein CNQ55_RS21715 PF12833 Helix-turn-helix domain CNQ55_RS21715 PF02311 AraC-like ligand binding domain CNQ55_RS21725 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CNQ55_RS21730 PF02610 L-arabinose isomerase CNQ55_RS21730 PF11762 L-arabinose isomerase C-terminal domain CNQ55_RS21735 PF00596 Class II Aldolase and Adducin N-terminal domain CNQ55_RS21740 PF03104 DNA polymerase family B, exonuclease domain CNQ55_RS21740 PF00136 DNA polymerase family B CNQ55_RS21745 PF00271 Helicase conserved C-terminal domain CNQ55_RS21745 PF18337 RapA N-terminal Tudor like domain CNQ55_RS21745 PF12137 RNA polymerase recycling family C-terminal CNQ55_RS21745 PF00176 SNF2 family N-terminal domain CNQ55_RS21745 PF18339 RapA N-terminal Tudor like domain 1 CNQ55_RS21750 PF00849 RNA pseudouridylate synthase CNQ55_RS21755 PF05099 Tellurite resistance protein TerB CNQ55_RS21755 PF00226 DnaJ domain CNQ55_RS21760 PF03968 OstA-like protein CNQ55_RS21760 PF04453 LPS transport system D CNQ55_RS21765 PF09312 SurA N-terminal domain CNQ55_RS21765 PF00639 PPIC-type PPIASE domain CNQ55_RS21770 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CNQ55_RS21775 PF00398 Ribosomal RNA adenine dimethylase CNQ55_RS21780 PF04379 ApaG domain CNQ55_RS21785 PF00149 Calcineurin-like phosphoesterase CNQ55_RS21800 PF00186 Dihydrofolate reductase CNQ55_RS21805 PF00999 Sodium/hydrogen exchanger family CNQ55_RS21805 PF02254 TrkA-N domain CNQ55_RS21810 PF02525 Flavodoxin-like fold CNQ55_RS21815 PF00083 Sugar (and other) transporter CNQ55_RS21825 PF01494 FAD binding domain CNQ55_RS21830 PF01012 Electron transfer flavoprotein domain CNQ55_RS21830 PF00766 Electron transfer flavoprotein FAD-binding domain CNQ55_RS21835 PF01012 Electron transfer flavoprotein domain CNQ55_RS21840 PF02028 BCCT, betaine/carnitine/choline family transporter CNQ55_RS21845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CNQ55_RS21845 PF02770 Acyl-CoA dehydrogenase, middle domain CNQ55_RS21845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CNQ55_RS21850 PF02515 CoA-transferase family III CNQ55_RS21855 PF00501 AMP-binding enzyme CNQ55_RS21855 PF13193 AMP-binding enzyme C-terminal domain CNQ55_RS21860 PF00378 Enoyl-CoA hydratase/isomerase CNQ55_RS21865 PF00132 Bacterial transferase hexapeptide (six repeats) CNQ55_RS21870 PF07180 CaiF/GrlA transcriptional regulator CNQ55_RS21880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CNQ55_RS21880 PF02142 MGS-like domain CNQ55_RS21880 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CNQ55_RS21885 PF00117 Glutamine amidotransferase class-I CNQ55_RS21885 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CNQ55_RS21895 PF01113 Dihydrodipicolinate reductase, N-terminus CNQ55_RS21895 PF05173 Dihydrodipicolinate reductase, C-terminus CNQ55_RS21900 PF01156 Inosine-uridine preferring nucleoside hydrolase CNQ55_RS21905 PF02401 LytB protein CNQ55_RS21910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CNQ55_RS21915 PF01252 Signal peptidase (SPase) II CNQ55_RS21920 PF08264 Anticodon-binding domain of tRNA CNQ55_RS21920 PF00133 tRNA synthetases class I (I, L, M and V) CNQ55_RS21920 PF06827 Zinc finger found in FPG and IleRS CNQ55_RS21925 PF01687 Riboflavin kinase CNQ55_RS21925 PF06574 FAD synthetase CNQ55_RS21930 PF10837 Protein of unknown function (DUF2575) CNQ55_RS21935 PF01649 Ribosomal protein S20 CNQ55_RS21940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS21940 PF03466 LysR substrate binding domain CNQ55_RS21945 PF06965 Na+/H+ antiporter 1 CNQ55_RS21955 PF16385 Domain of unknown function CNQ55_RS21955 PF00884 Sulfatase CNQ55_RS21970 PF01848 Hok/gef family CNQ55_RS21975 PF01556 DnaJ C terminal domain CNQ55_RS21975 PF00226 DnaJ domain CNQ55_RS21975 PF00684 DnaJ central domain CNQ55_RS21980 PF00012 Hsp70 protein CNQ55_RS21985 PF10807 Protein of unknown function (DUF2541) CNQ55_RS21990 PF13099 Domain of unknown function (DUF3944) CNQ55_RS21990 PF03981 Ubiquinol-cytochrome C chaperone CNQ55_RS21995 PF01184 GPR1/FUN34/yaaH family CNQ55_RS22000 PF00994 Probable molybdopterin binding domain CNQ55_RS22005 PF00923 Transaldolase/Fructose-6-phosphate aldolase CNQ55_RS22015 PF03883 Peroxide stress protein YaaA CNQ55_RS22020 PF10697 Protein of unknown function (DUF2502) CNQ55_RS22030 PF14821 Threonine synthase N terminus CNQ55_RS22030 PF00291 Pyridoxal-phosphate dependent enzyme CNQ55_RS22035 PF08544 GHMP kinases C terminal CNQ55_RS22035 PF00288 GHMP kinases N terminal domain CNQ55_RS22040 PF01842 ACT domain CNQ55_RS22040 PF03447 Homoserine dehydrogenase, NAD binding domain CNQ55_RS22040 PF00742 Homoserine dehydrogenase CNQ55_RS22040 PF13840 ACT domain CNQ55_RS22040 PF00696 Amino acid kinase family CNQ55_RS22045 PF08254 Threonine leader peptide CNQ55_RS22050 PF00588 SpoU rRNA Methylase family CNQ55_RS22060 PF00486 Transcriptional regulatory protein, C terminal CNQ55_RS22060 PF00072 Response regulator receiver domain CNQ55_RS22065 PF06123 Inner membrane protein CreD CNQ55_RS22070 PF00672 HAMP domain CNQ55_RS22070 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS22070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS22075 PF00072 Response regulator receiver domain CNQ55_RS22075 PF00486 Transcriptional regulatory protein, C terminal CNQ55_RS22080 PF05981 CreA protein CNQ55_RS22085 PF06445 GyrI-like small molecule binding domain CNQ55_RS22085 PF12833 Helix-turn-helix domain CNQ55_RS22090 PF00300 Histidine phosphatase superfamily (branch 1) CNQ55_RS22095 PF01931 Protein of unknown function DUF84 CNQ55_RS22100 PF01371 Trp repressor protein CNQ55_RS22105 PF14718 Soluble lytic murein transglycosylase L domain CNQ55_RS22105 PF01464 Transglycosylase SLT domain CNQ55_RS22110 PF00005 ABC transporter CNQ55_RS22110 PF12848 ABC transporter CNQ55_RS22120 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system CNQ55_RS22125 PF01381 Helix-turn-helix CNQ55_RS22125 PF13521 AAA domain CNQ55_RS22130 PF18073 Rubredoxin metal binding domain CNQ55_RS22135 PF18429 Domain of unknown function (DUF5609) CNQ55_RS22140 PF10144 Bacterial virulence factor haemolysin CNQ55_RS22145 PF10437 Bacterial lipoate protein ligase C-terminus CNQ55_RS22145 PF03099 Biotin/lipoate A/B protein ligase family CNQ55_RS22155 PF01048 Phosphorylase superfamily CNQ55_RS22160 PF01676 Metalloenzyme superfamily CNQ55_RS22165 PF02885 Glycosyl transferase family, helical bundle domain CNQ55_RS22165 PF00591 Glycosyl transferase family, a/b domain CNQ55_RS22165 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CNQ55_RS22170 PF01791 DeoC/LacD family aldolase CNQ55_RS22175 PF11230 Protein of unknown function (DUF3029) CNQ55_RS22180 PF04055 Radical SAM superfamily CNQ55_RS22185 PF01026 TatD related DNase CNQ55_RS22190 PF01734 Patatin-like phospholipase CNQ55_RS22195 PF07043 Protein of unknown function (DUF1328) CNQ55_RS22200 PF04972 BON domain CNQ55_RS22205 PF00009 Elongation factor Tu GTP binding domain CNQ55_RS22205 PF16658 Class II release factor RF3, C-terminal domain CNQ55_RS22205 PF03144 Elongation factor Tu domain 2 CNQ55_RS22210 PF13419 Haloacid dehalogenase-like hydrolase CNQ55_RS22215 PF00583 Acetyltransferase (GNAT) family CNQ55_RS22220 PF03603 DNA polymerase III psi subunit CNQ55_RS22225 PF08468 Methyltransferase small domain N-terminal CNQ55_RS22225 PF05175 Methyltransferase small domain CNQ55_RS22245 PF07256 Protein of unknown function (DUF1435) CNQ55_RS22250 PF06276 Ferric iron reductase FhuF-like transporter CNQ55_RS22250 PF11575 FhuF 2Fe-2S C-terminal domain CNQ55_RS22255 PF00196 Bacterial regulatory proteins, luxR family CNQ55_RS22260 PF00196 Bacterial regulatory proteins, luxR family CNQ55_RS22265 PF06738 Putative threonine/serine exporter CNQ55_RS22270 PF12821 Threonine/Serine exporter, ThrE CNQ55_RS22275 PF17948 DnaT DNA-binding domain CNQ55_RS22280 PF01695 IstB-like ATP binding protein CNQ55_RS22285 PF10696 Protein of unknown function (DUF2501) CNQ55_RS22290 PF00884 Sulfatase CNQ55_RS22295 PF08240 Alcohol dehydrogenase GroES-like domain CNQ55_RS22295 PF00107 Zinc-binding dehydrogenase CNQ55_RS22300 PF00392 Bacterial regulatory proteins, gntR family CNQ55_RS22300 PF07729 FCD domain CNQ55_RS22305 PF00999 Sodium/hydrogen exchanger family CNQ55_RS22310 PF03480 Bacterial extracellular solute-binding protein, family 7 CNQ55_RS22320 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CNQ55_RS22325 PF02203 Tar ligand binding domain homologue CNQ55_RS22325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CNQ55_RS22325 PF00672 HAMP domain CNQ55_RS22335 PF13722 5TM C-terminal transporter carbon starvation CstA CNQ55_RS22335 PF02554 Carbon starvation protein CstA CNQ55_RS22340 PF04328 Selenoprotein, putative CNQ55_RS22345 PF07683 Cobalamin synthesis protein cobW C-terminal domain CNQ55_RS22345 PF02492 CobW/HypB/UreG, nucleotide-binding domain CNQ55_RS22355 PF08463 EcoEI R protein C-terminal CNQ55_RS22355 PF00271 Helicase conserved C-terminal domain CNQ55_RS22355 PF04851 Type III restriction enzyme, res subunit CNQ55_RS22355 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CNQ55_RS22360 PF02384 N-6 DNA Methylase CNQ55_RS22360 PF12161 HsdM N-terminal domain CNQ55_RS22365 PF01420 Type I restriction modification DNA specificity domain CNQ55_RS22370 PF08845 Toxin SymE, type I toxin-antitoxin system CNQ55_RS22380 PF06568 Domain of unknown function (DUF1127) CNQ55_RS22385 PF04754 Putative transposase, YhgA-like CNQ55_RS22390 PF04286 Protein of unknown function (DUF445) CNQ55_RS22395 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CNQ55_RS22400 PF01869 BadF/BadG/BcrA/BcrD ATPase family CNQ55_RS22405 PF11823 Protein of unknown function (DUF3343) CNQ55_RS22410 PF06977 SdiA-regulated CNQ55_RS22415 PF06779 Uncharacterised MFS-type transporter YbfB CNQ55_RS22420 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family CNQ55_RS22425 PF07670 Nucleoside recognition CNQ55_RS22430 PF07670 Nucleoside recognition CNQ55_RS22435 PF01979 Amidohydrolase family CNQ55_RS22440 PF03466 LysR substrate binding domain CNQ55_RS22440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS22450 PF04965 Gene 25-like lysozyme CNQ55_RS22460 PF00392 Bacterial regulatory proteins, gntR family CNQ55_RS22460 PF07729 FCD domain CNQ55_RS22465 PF08125 Mannitol dehydrogenase C-terminal domain CNQ55_RS22465 PF01232 Mannitol dehydrogenase Rossmann domain CNQ55_RS22470 PF03786 D-mannonate dehydratase (UxuA) CNQ55_RS22480 PF00419 Fimbrial protein CNQ55_RS22480 PF09160 FimH, mannose binding CNQ55_RS22490 PF00419 Fimbrial protein CNQ55_RS22495 PF00577 Outer membrane usher protein CNQ55_RS22495 PF13954 PapC N-terminal domain CNQ55_RS22495 PF13953 PapC C-terminal domain CNQ55_RS22500 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CNQ55_RS22500 PF02753 Pili assembly chaperone PapD, C-terminal domain CNQ55_RS22505 PF00419 Fimbrial protein CNQ55_RS22510 PF00419 Fimbrial protein CNQ55_RS22520 PF00589 Phage integrase family CNQ55_RS22525 PF00589 Phage integrase family CNQ55_RS22540 PF06178 Oligogalacturonate-specific porin protein (KdgM) CNQ55_RS22550 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase CNQ55_RS22595 PF06755 CbtA_toxin of type IV toxin-antitoxin system CNQ55_RS22600 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A CNQ55_RS22605 PF06174 Protein of unknown function (DUF987) CNQ55_RS22610 PF04002 RadC-like JAB domain CNQ55_RS22615 PF03230 Antirestriction protein CNQ55_RS22620 PF06067 Domain of unknown function (DUF932) CNQ55_RS22625 PF06006 Bacterial protein of unknown function (DUF905) CNQ55_RS22635 PF13280 WYL domain CNQ55_RS22635 PF08220 DeoR-like helix-turn-helix domain CNQ55_RS22640 PF01926 50S ribosome-binding GTPase CNQ55_RS22720 PF13286 Phosphohydrolase-associated domain CNQ55_RS22720 PF01966 HD domain CNQ55_RS22760 PF04851 Type III restriction enzyme, res subunit CNQ55_RS22760 PF00271 Helicase conserved C-terminal domain CNQ55_RS22760 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CNQ55_RS22760 PF08463 EcoEI R protein C-terminal CNQ55_RS22765 PF02384 N-6 DNA Methylase CNQ55_RS22765 PF12161 HsdM N-terminal domain CNQ55_RS22770 PF01420 Type I restriction modification DNA specificity domain CNQ55_RS22780 PF13356 Arm DNA-binding domain CNQ55_RS22780 PF00589 Phage integrase family CNQ55_RS22785 PF13505 Outer membrane protein beta-barrel domain CNQ55_RS22790 PF00884 Sulfatase CNQ55_RS22795 PF13087 AAA domain CNQ55_RS22795 PF13091 PLD-like domain CNQ55_RS22805 PF13356 Arm DNA-binding domain CNQ55_RS22805 PF00589 Phage integrase family CNQ55_RS22815 PF08240 Alcohol dehydrogenase GroES-like domain CNQ55_RS22815 PF00107 Zinc-binding dehydrogenase CNQ55_RS22820 PF01202 Shikimate kinase CNQ55_RS22830 PF08240 Alcohol dehydrogenase GroES-like domain CNQ55_RS22830 PF00107 Zinc-binding dehydrogenase CNQ55_RS22835 PF00106 short chain dehydrogenase CNQ55_RS22840 PF02447 GntP family permease CNQ55_RS22845 PF00356 Bacterial regulatory proteins, lacI family CNQ55_RS22850 PF05872 Bacterial protein of unknown function (DUF853) CNQ55_RS22855 PF03739 Lipopolysaccharide export system permease LptF/LptG CNQ55_RS22860 PF03739 Lipopolysaccharide export system permease LptF/LptG CNQ55_RS22865 PF02789 Cytosol aminopeptidase family, N-terminal domain CNQ55_RS22865 PF00883 Cytosol aminopeptidase family, catalytic domain CNQ55_RS22870 PF04364 DNA polymerase III chi subunit, HolC CNQ55_RS22875 PF10458 Valyl tRNA synthetase tRNA binding arm CNQ55_RS22875 PF00133 tRNA synthetases class I (I, L, M and V) CNQ55_RS22875 PF08264 Anticodon-binding domain of tRNA CNQ55_RS22880 PF05987 Bacterial protein of unknown function (DUF898) CNQ55_RS22885 PF00583 Acetyltransferase (GNAT) family CNQ55_RS22890 PF06877 Regulator of ribonuclease activity B CNQ55_RS22895 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CNQ55_RS22895 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CNQ55_RS22900 PF04074 YhcH/YjgK/YiaL CNQ55_RS22910 PF00696 Amino acid kinase family CNQ55_RS22915 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CNQ55_RS22915 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CNQ55_RS22920 PF03606 C4-dicarboxylate anaerobic carrier CNQ55_RS22925 PF02863 Arginine repressor, C-terminal domain CNQ55_RS22925 PF01316 Arginine repressor, DNA binding domain CNQ55_RS22930 PF08052 PyrBI operon leader peptide CNQ55_RS22935 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CNQ55_RS22935 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CNQ55_RS22940 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CNQ55_RS22940 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CNQ55_RS22945 PF01042 Endoribonuclease L-PSP CNQ55_RS22950 PF00689 Cation transporting ATPase, C-terminus CNQ55_RS22950 PF00690 Cation transporter/ATPase, N-terminus CNQ55_RS22955 PF00356 Bacterial regulatory proteins, lacI family CNQ55_RS22960 PF00367 phosphotransferase system, EIIB CNQ55_RS22960 PF02378 Phosphotransferase system, EIIC CNQ55_RS22965 PF00128 Alpha amylase, catalytic domain CNQ55_RS22965 PF11941 Domain of unknown function (DUF3459) CNQ55_RS22970 PF13597 Anaerobic ribonucleoside-triphosphate reductase CNQ55_RS22970 PF03477 ATP cone domain CNQ55_RS22980 PF07361 Cytochrome b562 CNQ55_RS22985 PF01523 Putative modulator of DNA gyrase CNQ55_RS22990 PF04751 Protein of unknown function (DUF615) CNQ55_RS22995 PF02875 Mur ligase family, glutamate ligase domain CNQ55_RS22995 PF08245 Mur ligase middle domain CNQ55_RS22995 PF01225 Mur ligase family, catalytic domain CNQ55_RS23000 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CNQ55_RS23005 PF02653 Branched-chain amino acid transport system / permease component CNQ55_RS23010 PF02653 Branched-chain amino acid transport system / permease component CNQ55_RS23015 PF00005 ABC transporter CNQ55_RS23020 PF13407 Periplasmic binding protein domain CNQ55_RS23025 PF00719 Inorganic pyrophosphatase CNQ55_RS23030 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CNQ55_RS23035 PF04357 TamB, inner membrane protein subunit of TAM complex CNQ55_RS23040 PF01103 Surface antigen CNQ55_RS23040 PF17243 POTRA domain TamA domain 1 CNQ55_RS23040 PF07244 Surface antigen variable number repeat CNQ55_RS23045 PF01625 Peptide methionine sulfoxide reductase CNQ55_RS23050 PF01595 Cyclin M transmembrane N-terminal domain CNQ55_RS23050 PF03471 Transporter associated domain CNQ55_RS23050 PF00571 CBS domain CNQ55_RS23055 PF06526 Protein of unknown function (DUF1107) CNQ55_RS23060 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CNQ55_RS23065 PF00459 Inositol monophosphatase family CNQ55_RS23070 PF02872 5'-nucleotidase, C-terminal domain CNQ55_RS23070 PF00149 Calcineurin-like phosphoesterase CNQ55_RS23075 PF01638 HxlR-like helix-turn-helix CNQ55_RS23080 PF05368 NmrA-like family CNQ55_RS23085 PF00892 EamA-like transporter family CNQ55_RS23090 PF04405 Domain of Unknown function (DUF542) CNQ55_RS23090 PF01814 Hemerythrin HHE cation binding domain CNQ55_RS23095 PF00324 Amino acid permease CNQ55_RS23100 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CNQ55_RS23100 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CNQ55_RS23110 PF04225 Opacity-associated protein A LysM-like domain CNQ55_RS23110 PF08525 Opacity-associated protein A N-terminal motif CNQ55_RS23115 PF17938 Tetracyclin repressor-like, C-terminal domain CNQ55_RS23130 PF00378 Enoyl-CoA hydratase/isomerase CNQ55_RS23135 PF01144 Coenzyme A transferase CNQ55_RS23140 PF00890 FAD binding domain CNQ55_RS23140 PF02910 Fumarate reductase flavoprotein C-term CNQ55_RS23145 PF07690 Major Facilitator Superfamily CNQ55_RS23170 PF03948 Ribosomal protein L9, C-terminal domain CNQ55_RS23170 PF01281 Ribosomal protein L9, N-terminal domain CNQ55_RS23175 PF01084 Ribosomal protein S18 CNQ55_RS23180 PF00436 Single-strand binding protein family CNQ55_RS23185 PF01250 Ribosomal protein S6 CNQ55_RS23190 PF07338 Protein of unknown function (DUF1471) CNQ55_RS23195 PF00596 Class II Aldolase and Adducin N-terminal domain CNQ55_RS23200 PF01261 Xylose isomerase-like TIM barrel CNQ55_RS23205 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CNQ55_RS23210 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CNQ55_RS23215 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CNQ55_RS23220 PF03611 PTS system sugar-specific permease component CNQ55_RS23230 PF00455 DeoR C terminal sensor domain CNQ55_RS23230 PF08220 DeoR-like helix-turn-helix domain CNQ55_RS23235 PF00326 Prolyl oligopeptidase family CNQ55_RS23240 PF07338 Protein of unknown function (DUF1471) CNQ55_RS23245 PF07338 Protein of unknown function (DUF1471) CNQ55_RS23255 PF18158 Adaptive response protein AidB N-terminal domain CNQ55_RS23255 PF02770 Acyl-CoA dehydrogenase, middle domain CNQ55_RS23255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CNQ55_RS23260 PF03738 Glutathionylspermidine synthase preATP-grasp CNQ55_RS23265 PF06693 Protein of unknown function (DUF1190) CNQ55_RS23270 PF03994 Domain of Unknown Function (DUF350) CNQ55_RS23275 PF10679 Protein of unknown function (DUF2491) CNQ55_RS23280 PF04012 PspA/IM30 family CNQ55_RS23285 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) CNQ55_RS23295 PF00588 SpoU rRNA Methylase family CNQ55_RS23295 PF08032 RNA 2'-O ribose methyltransferase substrate binding CNQ55_RS23300 PF17876 Cold shock domain CNQ55_RS23300 PF08461 Ribonuclease R winged-helix domain CNQ55_RS23300 PF00773 RNB domain CNQ55_RS23300 PF08206 Ribonuclease B OB domain CNQ55_RS23300 PF00575 S1 RNA binding domain CNQ55_RS23305 PF02082 Transcriptional regulator CNQ55_RS23310 PF00709 Adenylosuccinate synthetase CNQ55_RS23315 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CNQ55_RS23320 PF01145 SPFH domain / Band 7 family CNQ55_RS23325 PF01145 SPFH domain / Band 7 family CNQ55_RS23325 PF12221 Bacterial membrane protein N terminal CNQ55_RS23330 PF16360 GTP-binding GTPase Middle Region CNQ55_RS23330 PF01926 50S ribosome-binding GTPase CNQ55_RS23330 PF13167 GTP-binding GTPase N-terminal CNQ55_RS23335 PF17209 Hfq protein CNQ55_RS23345 PF01119 DNA mismatch repair protein, C-terminal domain CNQ55_RS23345 PF08676 MutL C terminal dimerisation domain CNQ55_RS23350 PF01520 N-acetylmuramoyl-L-alanine amidase CNQ55_RS23355 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CNQ55_RS23360 PF03853 YjeF-related protein N-terminus CNQ55_RS23360 PF01256 Carbohydrate kinase CNQ55_RS23365 PF08331 Domain of unknown function (DUF1730) CNQ55_RS23385 PF00929 Exonuclease CNQ55_RS23395 PF03193 RsgA GTPase CNQ55_RS23400 PF02666 Phosphatidylserine decarboxylase CNQ55_RS23405 PF00924 Mechanosensitive ion channel CNQ55_RS23405 PF12795 Mechanosensitive ion channel porin domain CNQ55_RS23405 PF12794 Mechanosensitive ion channel inner membrane domain 1 CNQ55_RS23410 PF13520 Amino acid permease CNQ55_RS23415 PF00152 tRNA synthetases class II (D, K and N) CNQ55_RS23420 PF02910 Fumarate reductase flavoprotein C-term CNQ55_RS23420 PF00890 FAD binding domain CNQ55_RS23425 PF13085 2Fe-2S iron-sulfur cluster binding domain CNQ55_RS23425 PF13183 4Fe-4S dicluster domain CNQ55_RS23430 PF02300 Fumarate reductase subunit C CNQ55_RS23435 PF02313 Fumarate reductase subunit D CNQ55_RS23440 PF00144 Beta-lactamase CNQ55_RS23445 PF08212 Lipocalin-like domain CNQ55_RS23450 PF00893 Small Multidrug Resistance protein CNQ55_RS23455 PF08085 Entericidin EcnA/B family CNQ55_RS23460 PF08085 Entericidin EcnA/B family CNQ55_RS23465 PF09285 Elongation factor P, C-terminal CNQ55_RS23465 PF01132 Elongation factor P (EF-P) OB domain CNQ55_RS23465 PF08207 Elongation factor P (EF-P) KOW-like domain CNQ55_RS23470 PF04055 Radical SAM superfamily CNQ55_RS23475 PF15922 YjeJ-like CNQ55_RS23480 PF13698 Domain of unknown function (DUF4156) CNQ55_RS23485 PF00118 TCP-1/cpn60 chaperonin family CNQ55_RS23490 PF00166 Chaperonin 10 Kd subunit CNQ55_RS23495 PF13520 Amino acid permease CNQ55_RS23500 PF04186 FxsA cytoplasmic membrane protein CNQ55_RS23505 PF10415 Fumarase C C-terminus CNQ55_RS23505 PF00206 Lyase CNQ55_RS23510 PF03605 Anaerobic c4-dicarboxylate membrane transporter CNQ55_RS23515 PF03091 CutA1 divalent ion tolerance protein CNQ55_RS23520 PF11412 Disulphide bond corrector protein DsbC CNQ55_RS23520 PF02683 Cytochrome C biogenesis protein transmembrane region CNQ55_RS23535 PF00589 Phage integrase family CNQ55_RS23535 PF13356 Arm DNA-binding domain CNQ55_RS23550 PF00884 Sulfatase CNQ55_RS23560 PF13505 Outer membrane protein beta-barrel domain CNQ55_RS23610 PF01047 MarR family CNQ55_RS23620 PF03628 PapG chaperone-binding domain CNQ55_RS23620 PF03627 PapG carbohydrate binding domain CNQ55_RS23625 PF00419 Fimbrial protein CNQ55_RS23630 PF00419 Fimbrial protein CNQ55_RS23635 PF00419 Fimbrial protein CNQ55_RS23640 PF14855 Pilus-assembly fibrillin subunit, chaperone CNQ55_RS23645 PF02753 Pili assembly chaperone PapD, C-terminal domain CNQ55_RS23645 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CNQ55_RS23650 PF00577 Outer membrane usher protein CNQ55_RS23650 PF13953 PapC C-terminal domain CNQ55_RS23650 PF13954 PapC N-terminal domain CNQ55_RS23660 PF00419 Fimbrial protein CNQ55_RS23665 PF03333 Adhesin biosynthesis transcription regulatory protein CNQ55_RS23670 PF04703 FaeA-like protein CNQ55_RS23710 PF00005 ABC transporter CNQ55_RS23710 PF00664 ABC transporter transmembrane region CNQ55_RS23710 PF03412 Peptidase C39 family CNQ55_RS23715 PF08339 RTX C-terminal domain CNQ55_RS23715 PF02382 N-terminal domain in RTX protein CNQ55_RS23715 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CNQ55_RS23720 PF02794 RTX toxin acyltransferase family CNQ55_RS23740 PF01548 Transposase CNQ55_RS23740 PF02371 Transposase IS116/IS110/IS902 family CNQ55_RS23775 PF05321 Haemolysin expression modulating protein CNQ55_RS23795 PF13006 Insertion element 4 transposase N-terminal CNQ55_RS23795 PF01609 Transposase DDE domain CNQ55_RS23820 PF13018 Extended Signal Peptide of Type V secretion system CNQ55_RS23820 PF03797 Autotransporter beta-domain CNQ55_RS23820 PF16168 Adhesin of bacterial autotransporter system, probable stalk CNQ55_RS23825 PF00350 Dynamin family CNQ55_RS23830 PF13990 YjcZ-like protein CNQ55_RS23850 PF06067 Domain of unknown function (DUF932) CNQ55_RS23855 PF03230 Antirestriction protein CNQ55_RS23860 PF04002 RadC-like JAB domain CNQ55_RS23865 PF06174 Protein of unknown function (DUF987) CNQ55_RS23870 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A CNQ55_RS23875 PF06755 CbtA_toxin of type IV toxin-antitoxin system CNQ55_RS23900 PF00486 Transcriptional regulatory protein, C terminal CNQ55_RS23900 PF18500 CadC C-terminal domain 1 CNQ55_RS23910 PF13520 Amino acid permease CNQ55_RS23915 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CNQ55_RS23915 PF01276 Orn/Lys/Arg decarboxylase, major domain CNQ55_RS23915 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CNQ55_RS23920 PF00854 POT family CNQ55_RS23925 PF00152 tRNA synthetases class II (D, K and N) CNQ55_RS23925 PF01336 OB-fold nucleic acid binding domain CNQ55_RS23930 PF10753 Toxin GhoT_OrtT CNQ55_RS23935 PF11080 Endoribonuclease GhoS CNQ55_RS23940 PF14542 GCN5-related N-acetyl-transferase CNQ55_RS23945 PF06902 Divergent 4Fe-4S mono-cluster CNQ55_RS23950 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CNQ55_RS23950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS23950 PF00989 PAS fold CNQ55_RS23950 PF17203 Single cache domain 3 CNQ55_RS23955 PF00072 Response regulator receiver domain CNQ55_RS23965 PF03605 Anaerobic c4-dicarboxylate membrane transporter CNQ55_RS23970 PF05683 Fumarase C-terminus CNQ55_RS23970 PF05681 Fumarate hydratase (Fumerase) CNQ55_RS23975 PF09997 Predicted membrane protein (DUF2238) CNQ55_RS23980 PF11975 Family 4 glycosyl hydrolase C-terminal domain CNQ55_RS23980 PF02056 Family 4 glycosyl hydrolase CNQ55_RS23990 PF12833 Helix-turn-helix domain CNQ55_RS23995 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CNQ55_RS23995 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CNQ55_RS23995 PF01276 Orn/Lys/Arg decarboxylase, major domain CNQ55_RS24000 PF12833 Helix-turn-helix domain CNQ55_RS24005 PF13520 Amino acid permease CNQ55_RS24010 PF08019 Phosphoethanolamine transferase EptA/EptB CNQ55_RS24010 PF00884 Sulfatase CNQ55_RS24015 PF00486 Transcriptional regulatory protein, C terminal CNQ55_RS24015 PF00072 Response regulator receiver domain CNQ55_RS24020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS24020 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS24030 PF08946 Osmosensory transporter coiled coil CNQ55_RS24030 PF00083 Sugar (and other) transporter CNQ55_RS24035 PF13990 YjcZ-like protein CNQ55_RS24040 PF00350 Dynamin family CNQ55_RS24050 PF08274 PhnA Zinc-Ribbon CNQ55_RS24050 PF03831 PhnA domain CNQ55_RS24055 PF06983 3-demethylubiquinone-9 3-methyltransferase CNQ55_RS24060 PF00005 ABC transporter CNQ55_RS24070 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS24075 PF00392 Bacterial regulatory proteins, gntR family CNQ55_RS24075 PF07702 UTRA domain CNQ55_RS24080 PF06754 Phosphonate metabolism protein PhnG CNQ55_RS24085 PF05845 Bacterial phosphonate metabolism protein (PhnH) CNQ55_RS24090 PF05861 Bacterial phosphonate metabolism protein (PhnI) CNQ55_RS24095 PF06007 Phosphonate metabolism protein PhnJ CNQ55_RS24100 PF00005 ABC transporter CNQ55_RS24105 PF00005 ABC transporter CNQ55_RS24110 PF07969 Amidohydrolase family CNQ55_RS24120 PF00583 Acetyltransferase (GNAT) family CNQ55_RS24125 PF12706 Beta-lactamase superfamily domain CNQ55_RS24135 PF02502 Ribose/Galactose Isomerase CNQ55_RS24145 PF01418 Helix-turn-helix domain, rpiR family CNQ55_RS24145 PF01380 SIS domain CNQ55_RS24150 PF13407 Periplasmic binding protein domain CNQ55_RS24155 PF00005 ABC transporter CNQ55_RS24160 PF02653 Branched-chain amino acid transport system / permease component CNQ55_RS24165 PF00834 Ribulose-phosphate 3 epimerase family CNQ55_RS24170 PF00480 ROK family CNQ55_RS24175 PF14864 Alkyl sulfatase C-terminal CNQ55_RS24175 PF14863 Alkyl sulfatase dimerisation CNQ55_RS24175 PF00753 Metallo-beta-lactamase superfamily CNQ55_RS24180 PF17090 Uncharacterised protein family CNQ55_RS24185 PF00529 HlyD membrane-fusion protein of T1SS CNQ55_RS24185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CNQ55_RS24190 PF04632 Fusaric acid resistance protein family CNQ55_RS24195 PF02321 Outer membrane efflux protein CNQ55_RS24210 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS24215 PF12911 N-terminal TM domain of oligopeptide transport permease C CNQ55_RS24215 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS24220 PF00005 ABC transporter CNQ55_RS24220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CNQ55_RS24225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CNQ55_RS24225 PF00005 ABC transporter CNQ55_RS24230 PF08238 Sel1 repeat CNQ55_RS24235 PF00375 Sodium:dicarboxylate symporter family CNQ55_RS24250 PF03918 Cytochrome C biogenesis protein CNQ55_RS24255 PF01578 Cytochrome C assembly protein CNQ55_RS24255 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CNQ55_RS24260 PF03916 Polysulphide reductase, NrfD CNQ55_RS24265 PF13247 4Fe-4S dicluster domain CNQ55_RS24265 PF00037 4Fe-4S binding domain CNQ55_RS24270 PF13435 Cytochrome c554 and c-prime CNQ55_RS24270 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) CNQ55_RS24275 PF02335 Cytochrome c552 CNQ55_RS24290 PF13193 AMP-binding enzyme C-terminal domain CNQ55_RS24290 PF16177 Acetyl-coenzyme A synthetase N-terminus CNQ55_RS24290 PF00501 AMP-binding enzyme CNQ55_RS24295 PF04341 Protein of unknown function, DUF485 CNQ55_RS24300 PF00474 Sodium:solute symporter family CNQ55_RS24305 PF04172 LrgB-like family CNQ55_RS24310 PF03788 LrgA family CNQ55_RS24320 PF00999 Sodium/hydrogen exchanger family CNQ55_RS24325 PF00860 Permease family CNQ55_RS24345 PF09278 MerR, DNA binding CNQ55_RS24345 PF00376 MerR family regulatory protein CNQ55_RS24350 PF12833 Helix-turn-helix domain CNQ55_RS24355 PF00563 EAL domain CNQ55_RS24355 PF12792 CSS motif domain associated with EAL CNQ55_RS24365 PF15940 Family of unknown function CNQ55_RS24370 PF00436 Single-strand binding protein family CNQ55_RS24375 PF17755 UvrA DNA-binding domain CNQ55_RS24375 PF00005 ABC transporter CNQ55_RS24375 PF17760 UvrA interaction domain CNQ55_RS24380 PF04237 YjbR CNQ55_RS24385 PF01894 Uncharacterised protein family UPF0047 CNQ55_RS24390 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CNQ55_RS24395 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS24395 PF02743 Cache domain CNQ55_RS24395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS24400 PF00158 Sigma-54 interaction domain CNQ55_RS24400 PF02954 Bacterial regulatory protein, Fis family CNQ55_RS24400 PF00072 Response regulator receiver domain CNQ55_RS24405 PF02615 Malate/L-lactate dehydrogenase CNQ55_RS24410 PF00939 Sodium:sulfate symporter transmembrane region CNQ55_RS24415 PF00549 CoA-ligase CNQ55_RS24415 PF02629 CoA binding domain CNQ55_RS24420 PF00549 CoA-ligase CNQ55_RS24420 PF08442 ATP-grasp domain CNQ55_RS24425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CNQ55_RS24425 PF07992 Pyridine nucleotide-disulphide oxidoreductase CNQ55_RS24430 PF00364 Biotin-requiring enzyme CNQ55_RS24430 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CNQ55_RS24430 PF02817 e3 binding domain CNQ55_RS24435 PF00676 Dehydrogenase E1 component CNQ55_RS24435 PF16078 2-oxoglutarate dehydrogenase N-terminus CNQ55_RS24435 PF02779 Transketolase, pyrimidine binding domain CNQ55_RS24435 PF16870 2-oxoglutarate dehydrogenase C-terminal CNQ55_RS24440 PF00155 Aminotransferase class I and II CNQ55_RS24445 PF01381 Helix-turn-helix CNQ55_RS24445 PF13521 AAA domain CNQ55_RS24450 PF04973 Nicotinamide mononucleotide transporter CNQ55_RS24455 PF01168 Alanine racemase, N-terminal domain CNQ55_RS24455 PF00842 Alanine racemase, C-terminal domain CNQ55_RS24465 PF00772 DnaB-like helicase N terminal domain CNQ55_RS24465 PF03796 DnaB-like helicase C terminal domain CNQ55_RS24470 PF08240 Alcohol dehydrogenase GroES-like domain CNQ55_RS24470 PF00107 Zinc-binding dehydrogenase CNQ55_RS24475 PF09583 Phage shock protein G (Phageshock_PspG) CNQ55_RS24480 PF01207 Dihydrouridine synthase (Dus) CNQ55_RS24485 PF01475 Ferric uptake regulator family CNQ55_RS24490 PF05532 CsbD-like CNQ55_RS24495 PF01554 MatE CNQ55_RS24500 PF01726 LexA DNA binding domain CNQ55_RS24500 PF00717 Peptidase S24-like CNQ55_RS24505 PF01219 Prokaryotic diacylglycerol kinase CNQ55_RS24510 PF01553 Acyltransferase CNQ55_RS24515 PF01040 UbiA prenyltransferase family CNQ55_RS24520 PF04345 Chorismate lyase CNQ55_RS24530 PF07148 Maltose operon periplasmic protein precursor (MalM) CNQ55_RS24535 PF02264 LamB porin CNQ55_RS24540 PF00005 ABC transporter CNQ55_RS24540 PF17912 MalK OB fold domain CNQ55_RS24550 PF01547 Bacterial extracellular solute-binding protein CNQ55_RS24555 PF14785 Maltose transport system permease protein MalF P2 domain CNQ55_RS24555 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS24560 PF00528 Binding-protein-dependent transport system inner membrane component CNQ55_RS24565 PF06146 Phosphate-starvation-inducible E CNQ55_RS24570 PF17089 Uncharacterised protein family CNQ55_RS24575 PF06082 Exopolysaccharide biosynthesis protein YbjH CNQ55_RS24580 PF06251 Capsule biosynthesis GfcC CNQ55_RS24585 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF CNQ55_RS24590 PF11106 Exopolysaccharide production protein YjbE CNQ55_RS24595 PF00342 Phosphoglucose isomerase CNQ55_RS24610 PF01842 ACT domain CNQ55_RS24610 PF00696 Amino acid kinase family CNQ55_RS24615 PF11656 YjbD family (DUF3811) CNQ55_RS24620 PF01479 S4 domain CNQ55_RS24620 PF00849 RNA pseudouridylate synthase CNQ55_RS24625 PF13936 Helix-turn-helix domain CNQ55_RS24625 PF04198 Putative sugar-binding domain CNQ55_RS24630 PF00106 short chain dehydrogenase CNQ55_RS24635 PF03610 PTS system fructose IIA component CNQ55_RS24640 PF03830 PTS system sorbose subfamily IIB component CNQ55_RS24645 PF03609 PTS system sorbose-specific iic component CNQ55_RS24650 PF03613 PTS system mannose/fructose/sorbose family IID component CNQ55_RS24655 PF08240 Alcohol dehydrogenase GroES-like domain CNQ55_RS24655 PF00107 Zinc-binding dehydrogenase CNQ55_RS24665 PF03575 Peptidase family S51 CNQ55_RS24670 PF02690 Na+/Pi-cotransporter CNQ55_RS24685 PF00809 Pterin binding enzyme CNQ55_RS24685 PF02574 Homocysteine S-methyltransferase CNQ55_RS24685 PF02965 Vitamin B12 dependent methionine synthase, activation domain CNQ55_RS24685 PF02607 B12 binding domain CNQ55_RS24685 PF02310 B12 binding domain CNQ55_RS24690 PF09339 IclR helix-turn-helix domain CNQ55_RS24690 PF01614 Bacterial transcriptional regulator CNQ55_RS24695 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CNQ55_RS24700 PF00463 Isocitrate lyase family CNQ55_RS24705 PF01274 Malate synthase CNQ55_RS24710 PF04204 Homoserine O-succinyltransferase CNQ55_RS24715 PF13673 Acetyltransferase (GNAT) domain CNQ55_RS24750 PF12724 Flavodoxin domain CNQ55_RS24755 PF02386 Cation transport protein CNQ55_RS24760 PF01205 Uncharacterized protein family UPF0029 CNQ55_RS24760 PF09186 Domain of unknown function (DUF1949) CNQ55_RS24765 PF00557 Metallopeptidase family M24 CNQ55_RS24770 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CNQ55_RS24770 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CNQ55_RS24770 PF00378 Enoyl-CoA hydratase/isomerase CNQ55_RS24775 PF00108 Thiolase, N-terminal domain CNQ55_RS24775 PF02803 Thiolase, C-terminal domain CNQ55_RS24780 PF00175 Oxidoreductase NAD-binding domain CNQ55_RS24780 PF00970 Oxidoreductase FAD-binding domain CNQ55_RS24785 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CNQ55_RS24790 PF02357 Transcription termination factor nusG CNQ55_RS24795 PF01026 TatD related DNase CNQ55_RS24800 PF00902 Sec-independent protein translocase protein (TatC) CNQ55_RS24810 PF02416 mttA/Hcf106 family CNQ55_RS24815 PF03109 ABC1 family CNQ55_RS24820 PF02036 SCP-2 sterol transfer family CNQ55_RS24825 PF01209 ubiE/COQ5 methyltransferase family CNQ55_RS24830 PF02646 RmuC family CNQ55_RS24835 PF01614 Bacterial transcriptional regulator CNQ55_RS24835 PF09339 IclR helix-turn-helix domain CNQ55_RS24840 PF05035 2-keto-3-deoxy-galactonokinase CNQ55_RS24845 PF01081 KDPG and KHG aldolase CNQ55_RS24850 PF03401 Tripartite tricarboxylate transporter family receptor CNQ55_RS24865 PF01048 Phosphorylase superfamily CNQ55_RS24870 PF01738 Dienelactone hydrolase family CNQ55_RS24875 PF00857 Isochorismatase family CNQ55_RS24885 PF02629 CoA binding domain CNQ55_RS24885 PF00549 CoA-ligase CNQ55_RS24890 PF06545 Protein of unknown function (DUF1116) CNQ55_RS24895 PF00696 Amino acid kinase family CNQ55_RS24905 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CNQ55_RS24910 PF03466 LysR substrate binding domain CNQ55_RS24910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS24915 PF01380 SIS domain CNQ55_RS24915 PF01418 Helix-turn-helix domain, rpiR family CNQ55_RS24920 PF02779 Transketolase, pyrimidine binding domain CNQ55_RS24920 PF00456 Transketolase, thiamine diphosphate binding domain CNQ55_RS24920 PF02780 Transketolase, C-terminal domain CNQ55_RS24925 PF00367 phosphotransferase system, EIIB CNQ55_RS24925 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CNQ55_RS24925 PF02378 Phosphotransferase system, EIIC CNQ55_RS24935 PF05638 Type VI secretion system effector, Hcp CNQ55_RS24950 PF08267 Cobalamin-independent synthase, N-terminal domain CNQ55_RS24950 PF01717 Cobalamin-independent synthase, Catalytic domain CNQ55_RS24955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS24955 PF03466 LysR substrate binding domain CNQ55_RS24960 PF00892 EamA-like transporter family CNQ55_RS24970 PF12146 Serine aminopeptidase, S33 CNQ55_RS24975 PF01810 LysE type translocator CNQ55_RS24980 PF01810 LysE type translocator CNQ55_RS24985 PF00570 HRDC domain CNQ55_RS24985 PF16124 RecQ zinc-binding CNQ55_RS24985 PF09382 RQC domain CNQ55_RS24985 PF00271 Helicase conserved C-terminal domain CNQ55_RS24985 PF00270 DEAD/DEAH box helicase CNQ55_RS24990 PF02253 Phospholipase A1 CNQ55_RS24995 PF03061 Thioesterase superfamily CNQ55_RS25000 PF00892 EamA-like transporter family CNQ55_RS25015 PF01544 CorA-like Mg2+ transporter protein CNQ55_RS25020 PF09992 Phosphodiester glycosidase CNQ55_RS25025 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase CNQ55_RS25030 PF00580 UvrD/REP helicase N-terminal domain CNQ55_RS25030 PF13361 UvrD-like helicase C-terminal domain CNQ55_RS25035 PF13419 Haloacid dehalogenase-like hydrolase CNQ55_RS25040 PF00589 Phage integrase family CNQ55_RS25040 PF02899 Phage integrase, N-terminal SAM-like domain CNQ55_RS25045 PF04340 Protein of unknown function, DUF484 CNQ55_RS25050 PF01678 Diaminopimelate epimerase CNQ55_RS25055 PF13627 Prokaryotic lipoprotein-attachment site CNQ55_RS25065 PF01491 Frataxin-like domain CNQ55_RS25070 PF12633 Adenylate cyclase NT domain CNQ55_RS25070 PF01295 Adenylate cyclase, class-I CNQ55_RS25080 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CNQ55_RS25080 PF03900 Porphobilinogen deaminase, C-terminal domain CNQ55_RS25085 PF02602 Uroporphyrinogen-III synthase HemD CNQ55_RS25090 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CNQ55_RS25095 PF07719 Tetratricopeptide repeat CNQ55_RS25095 PF07219 HemY protein N-terminus CNQ55_RS25100 PF00884 Sulfatase CNQ55_RS25105 PF13186 Iron-sulfur cluster-binding domain CNQ55_RS25105 PF04055 Radical SAM superfamily CNQ55_RS25130 PF00324 Amino acid permease CNQ55_RS25135 PF03808 Glycosyl transferase WecB/TagA/CpsF family CNQ55_RS25140 PF06899 WzyE protein, O-antigen assembly polymerase CNQ55_RS25145 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CNQ55_RS25150 PF01943 Polysaccharide biosynthesis protein CNQ55_RS25155 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CNQ55_RS25165 PF00483 Nucleotidyl transferase CNQ55_RS25170 PF16363 GDP-mannose 4,6 dehydratase CNQ55_RS25175 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CNQ55_RS25175 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CNQ55_RS25175 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CNQ55_RS25180 PF02350 UDP-N-acetylglucosamine 2-epimerase CNQ55_RS25185 PF02706 Chain length determinant protein CNQ55_RS25190 PF00953 Glycosyl transferase family 4 CNQ55_RS25200 PF07497 Rho termination factor, RNA-binding domain CNQ55_RS25200 PF07498 Rho termination factor, N-terminal domain CNQ55_RS25200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CNQ55_RS25210 PF00085 Thioredoxin CNQ55_RS25215 PF00271 Helicase conserved C-terminal domain CNQ55_RS25215 PF00270 DEAD/DEAH box helicase CNQ55_RS25225 PF02541 Ppx/GppA phosphatase family CNQ55_RS25230 PF00580 UvrD/REP helicase N-terminal domain CNQ55_RS25230 PF13361 UvrD-like helicase C-terminal domain CNQ55_RS25240 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CNQ55_RS25240 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CNQ55_RS25245 PF03466 LysR substrate binding domain CNQ55_RS25245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS25250 PF00291 Pyridoxal-phosphate dependent enzyme CNQ55_RS25250 PF00585 C-terminal regulatory domain of Threonine dehydratase CNQ55_RS25255 PF00920 Dehydratase family CNQ55_RS25260 PF01063 Amino-transferase class IV CNQ55_RS25270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CNQ55_RS25270 PF00205 Thiamine pyrophosphate enzyme, central domain CNQ55_RS25270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CNQ55_RS25275 PF08046 IlvGEDA operon leader peptide CNQ55_RS25285 PF01078 Magnesium chelatase, subunit ChlI CNQ55_RS25285 PF13335 Magnesium chelatase, subunit ChlI C-terminal CNQ55_RS25290 PF04219 Protein of unknown function, DUF CNQ55_RS25295 PF03466 LysR substrate binding domain CNQ55_RS25295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CNQ55_RS25335 PF02142 MGS-like domain CNQ55_RS25335 PF01808 AICARFT/IMPCHase bienzyme CNQ55_RS25340 PF02844 Phosphoribosylglycinamide synthetase, N domain CNQ55_RS25340 PF02843 Phosphoribosylglycinamide synthetase, C domain CNQ55_RS25340 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CNQ55_RS25345 PF02954 Bacterial regulatory protein, Fis family CNQ55_RS25345 PF00072 Response regulator receiver domain CNQ55_RS25345 PF00158 Sigma-54 interaction domain CNQ55_RS25350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CNQ55_RS25350 PF00512 His Kinase A (phospho-acceptor) domain CNQ55_RS25360 PF13801 Heavy-metal resistance CNQ55_RS25365 PF07356 Protein of unknown function (DUF1481) CNQ55_RS25370 PF00216 Bacterial DNA-binding protein CNQ55_RS25375 PF04222 Protein of unknown function (DUF416) CNQ55_RS25380 PF04493 Endonuclease V CNQ55_RS25385 PF01208 Uroporphyrinogen decarboxylase (URO-D) CNQ55_RS25390 PF00293 NUDIX domain CNQ55_RS25390 PF09297 NADH pyrophosphatase zinc ribbon domain CNQ55_RS25395 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CNQ55_RS25400 PF01964 Radical SAM ThiC family CNQ55_RS25400 PF13667 ThiC-associated domain CNQ55_RS25405 PF02581 Thiamine monophosphate synthase CNQ55_RS25410 PF00899 ThiF family CNQ55_RS25415 PF02597 ThiS family CNQ55_RS25420 PF05690 Thiazole biosynthesis protein ThiG CNQ55_RS25425 PF06968 Biotin and Thiamin Synthesis associated domain CNQ55_RS25425 PF04055 Radical SAM superfamily CNQ55_RS25430 PF04983 RNA polymerase Rpb1, domain 3 CNQ55_RS25430 PF00623 RNA polymerase Rpb1, domain 2 CNQ55_RS25430 PF05000 RNA polymerase Rpb1, domain 4 CNQ55_RS25430 PF04997 RNA polymerase Rpb1, domain 1 CNQ55_RS25430 PF04998 RNA polymerase Rpb1, domain 5 CNQ55_RS25435 PF04565 RNA polymerase Rpb2, domain 3 CNQ55_RS25435 PF10385 RNA polymerase beta subunit external 1 domain CNQ55_RS25435 PF00562 RNA polymerase Rpb2, domain 6 CNQ55_RS25435 PF04563 RNA polymerase beta subunit CNQ55_RS25435 PF04561 RNA polymerase Rpb2, domain 2 CNQ55_RS25435 PF04560 RNA polymerase Rpb2, domain 7 CNQ55_RS25440 PF00542 Ribosomal protein L7/L12 C-terminal domain CNQ55_RS25440 PF16320 Ribosomal protein L7/L12 dimerisation domain CNQ55_RS25445 PF00466 Ribosomal protein L10 CNQ55_RS25455 PF00687 Ribosomal protein L1p/L10e family CNQ55_RS25460 PF00298 Ribosomal protein L11, RNA binding domain CNQ55_RS25460 PF03946 Ribosomal protein L11, N-terminal domain CNQ55_RS25465 PF02357 Transcription termination factor nusG CNQ55_RS25465 PF00467 KOW motif CNQ55_RS25470 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CNQ55_RS25475 PF03143 Elongation factor Tu C-terminal domain CNQ55_RS25475 PF03144 Elongation factor Tu domain 2 CNQ55_RS25475 PF00009 Elongation factor Tu GTP binding domain CNQ55_RS25510 PF00485 Phosphoribulokinase / Uridine kinase family CNQ55_RS25515 PF02237 Biotin protein ligase C terminal domain CNQ55_RS25515 PF08279 HTH domain CNQ55_RS25515 PF03099 Biotin/lipoate A/B protein ligase family CNQ55_RS25520 PF01565 FAD binding domain CNQ55_RS25520 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CNQ55_RS25545 PF00392 Bacterial regulatory proteins, gntR family CNQ55_RS25545 PF07729 FCD domain CNQ55_RS25550 PF07690 Major Facilitator Superfamily CNQ55_RS25555 PF00356 Bacterial regulatory proteins, lacI family CNQ55_RS25560 PF00294 pfkB family carbohydrate kinase CNQ55_RS25565 PF13407 Periplasmic binding protein domain CNQ55_RS25570 PF02653 Branched-chain amino acid transport system / permease component CNQ55_RS25575 PF00005 ABC transporter CNQ55_RS25580 PF05025 RbsD / FucU transport protein family CNQ55_RS25585 PF02705 K+ potassium transporter CNQ55_RS25590 PF07728 AAA domain (dynein-related subfamily) CNQ55_RS25590 PF17868 AAA lid domain CNQ55_RS25590 PF12592 Protein of unknown function (DUF3763) CNQ55_RS25595 PF05762 VWA domain containing CoxE-like protein CNQ55_RS25600 PF03590 Aspartate-ammonia ligase CNQ55_RS25605 PF01037 Lrp/AsnC ligand binding domain CNQ55_RS25610 PF00258 Flavodoxin CNQ55_RS25615 PF01051 Initiator Replication protein CNQ55_RS25635 PF06406 StbA protein CNQ55_RS25645 PF06183 DinI-like family CNQ55_RS25695 PF00436 Single-strand binding protein family CNQ55_RS25700 PF06006 Bacterial protein of unknown function (DUF905) CNQ55_RS25705 PF02195 ParB-like nuclease domain CNQ55_RS25710 PF06290 Plasmid SOS inhibition protein (PsiB) CNQ55_RS25715 PF06952 PsiA protein CNQ55_RS25720 PF01848 Hok/gef family CNQ55_RS25745 PF06067 Domain of unknown function (DUF932) CNQ55_RS25750 PF01464 Transglycosylase SLT domain CNQ55_RS25755 PF05261 TraM protein, DNA-binding CNQ55_RS25760 PF00989 PAS fold CNQ55_RS25765 PF05509 TraY domain CNQ55_RS25770 PF05513 TraA CNQ55_RS25775 PF07178 TraL protein CNQ55_RS25780 PF05309 TraE protein CNQ55_RS25785 PF06586 TraK protein CNQ55_RS25790 PF03743 Bacterial conjugation TrbI-like protein CNQ55_RS25795 PF07296 TraP protein CNQ55_RS25800 PF10894 Protein of unknown function (DUF2689) CNQ55_RS25805 PF09676 Type IV conjugative transfer system lipoprotein (TraV) CNQ55_RS25810 PF01258 Prokaryotic dksA/traR C4-type zinc finger CNQ55_RS25845 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer CNQ55_RS25850 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) CNQ55_RS25855 PF12477 Sex factor F TraW protein N terminal CNQ55_RS25860 PF06834 TraU protein CNQ55_RS25875 PF09673 Type-F conjugative transfer system pilin assembly protein CNQ55_RS25890 PF06986 Type-1V conjugative transfer system mating pair stabilisation CNQ55_RS25895 PF11100 Conjugal transfer protein TrbE CNQ55_RS25900 PF13728 F plasmid transfer operon protein CNQ55_RS25915 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) CNQ55_RS25920 PF13728 F plasmid transfer operon protein CNQ55_RS25930 PF06122 Conjugative relaxosome accessory transposon protein CNQ55_RS25935 PF07916 TraG-like protein, N-terminal region CNQ55_RS25945 PF05818 Enterobacterial TraT complement resistance protein CNQ55_RS25955 PF10412 Type IV secretion-system coupling protein DNA-binding domain CNQ55_RS25955 PF12615 F sex factor protein N terminal CNQ55_RS25965 PF05857 TraX protein CNQ55_RS25970 PF12602 Fertility inhibition protein N terminal CNQ55_RS25970 PF04352 ProQ/FINO family CNQ55_RS26000 PF00239 Resolvase, N terminal domain CNQ55_RS26000 PF02796 Helix-turn-helix domain of resolvase CNQ55_RS26005 PF05321 Haemolysin expression modulating protein CNQ55_RS26020 PF02796 Helix-turn-helix domain of resolvase CNQ55_RS26020 PF00239 Resolvase, N terminal domain CNQ55_RS26030 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CNQ55_RS26045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CNQ55_RS26045 PF00529 HlyD membrane-fusion protein of T1SS CNQ55_RS26050 PF03412 Peptidase C39 family CNQ55_RS26050 PF00005 ABC transporter CNQ55_RS26050 PF00664 ABC transporter transmembrane region CNQ55_RS26070 PF10723 Replication regulatory protein RepB CNQ55_RS26080 PF08048 Tap RepA1 leader peptide CNQ55_RS26085 PF02387 IncFII RepA protein family CNQ55_RS26105 PF02687 FtsX-like permease family CNQ55_RS26105 PF12704 MacB-like periplasmic core domain CNQ55_RS26135 PF02195 ParB-like nuclease domain CNQ55_RS26140 PF11922 Domain of unknown function (DUF3440) CNQ55_RS26140 PF01507 Phosphoadenosine phosphosulfate reductase family CNQ55_RS26145 PF03472 Autoinducer binding domain CNQ55_RS26145 PF00196 Bacterial regulatory proteins, luxR family CNQ55_RS26150 PF00691 OmpA family CNQ55_RS26150 PF01389 OmpA-like transmembrane domain CNQ55_RS26155 PF03895 YadA-like membrane anchor domain CNQ55_RS26155 PF05662 Coiled stalk of trimeric autotransporter adhesin CNQ55_RS26155 PF05658 Head domain of trimeric autotransporter adhesin CNQ55_RS26155 PF13018 Extended Signal Peptide of Type V secretion system CNQ55_RS26160 PF03797 Autotransporter beta-domain CNQ55_RS26160 PF02395 Immunoglobulin A1 protease CNQ55_RS26160 PF13018 Extended Signal Peptide of Type V secretion system CNQ55_RS26165 PF03333 Adhesin biosynthesis transcription regulatory protein CNQ55_RS26170 PF05662 Coiled stalk of trimeric autotransporter adhesin CNQ55_RS26170 PF13018 Extended Signal Peptide of Type V secretion system CNQ55_RS26170 PF03895 YadA-like membrane anchor domain CNQ55_RS26170 PF05658 Head domain of trimeric autotransporter adhesin CNQ55_RS26180 PF03895 YadA-like membrane anchor domain CNQ55_RS26180 PF05658 Head domain of trimeric autotransporter adhesin CNQ55_RS26195 PF01850 PIN domain CNQ55_RS26200 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CNQ55_RS26210 PF07362 Post-segregation antitoxin CcdA CNQ55_RS26215 PF01845 CcdB protein CNQ55_RS26220 PF00589 Phage integrase family