locus-tag	class	description
CNQ55_RS00015	COG3312	ion transport
CNQ55_RS00070	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CNQ55_RS00075	COG0573	inorganic phosphate transmembrane transporter activity
CNQ55_RS00080	COG0581	inorganic phosphate transmembrane transporter activity
CNQ55_RS00085	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CNQ55_RS00090	COG0704	Plays a role in the regulation of phosphate uptake
CNQ55_RS00095	COG3711	transcriptional antiterminator
CNQ55_RS00100	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ55_RS00100	COG1263	PTS System
CNQ55_RS00100	COG2190	(PTS) system
CNQ55_RS00105	COG2723	6-phospho-beta-galactosidase activity
CNQ55_RS00115	COG2382	esterase
CNQ55_RS00120	COG0363	glucosamine-6-phosphate deaminase activity
CNQ55_RS00130	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CNQ55_RS00135	COG2252	PERMEase
CNQ55_RS00140	COG0431	NADPH-dependent FMN reductase
CNQ55_RS00145	COG2091	lysine biosynthetic process via aminoadipic acid
CNQ55_RS00150	COG0583	DNA-binding transcription factor activity
CNQ55_RS00160	COG0814	amino acid
CNQ55_RS00210	COG0592	DNA-directed DNA polymerase activity
CNQ55_RS00220	COG0187	DNA topoisomerase II activity
CNQ55_RS00225	COG3753	Protein conserved in bacteria
CNQ55_RS00230	COG0561	phosphatase activity
CNQ55_RS00240	COG2186	Transcriptional regulator
CNQ55_RS00245	COG3734	2-keto-3-deoxy-galactonokinase
CNQ55_RS00250	COG0800	Aldolase
CNQ55_RS00260	COG2271	Major facilitator Superfamily
CNQ55_RS00270	COG0823	Involved in the tonB-independent uptake of proteins
CNQ55_RS00275	COG5645	(Lipo)protein
CNQ55_RS00295	COG2207	Transcriptional regulator
CNQ55_RS00300	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CNQ55_RS00305	COG3119	arylsulfatase activity
CNQ55_RS00310	COG2149	membrane
CNQ55_RS00320	COG0641	radical SAM
CNQ55_RS00325	COG2814	Major facilitator Superfamily
CNQ55_RS00340	COG0028	Belongs to the TPP enzyme family
CNQ55_RS00345	COG0440	acetolactate synthase activity
CNQ55_RS00365	COG2197	response regulator
CNQ55_RS00370	COG3851	Histidine kinase
CNQ55_RS00375	COG2271	Major facilitator Superfamily
CNQ55_RS00380	COG2271	Major facilitator Superfamily
CNQ55_RS00390	COG2252	PERMEase
CNQ55_RS00415	COG1464	Belongs to the NlpA lipoprotein family
CNQ55_RS00420	COG0697	spore germination
CNQ55_RS00445	COG2211	Major facilitator Superfamily
CNQ55_RS00450	COG1501	Belongs to the glycosyl hydrolase 31 family
CNQ55_RS00455	COG3711	transcriptional antiterminator
CNQ55_RS00460	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ55_RS00460	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ55_RS00460	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ55_RS00465	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ55_RS00470	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ55_RS00470	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ55_RS00480	COG0191	fructose-bisphosphate aldolase activity
CNQ55_RS00485	COG1940	carbohydrate kinase activity
CNQ55_RS00495	COG2982	Protein involved in outer membrane biogenesis
CNQ55_RS00500	COG2233	PERMEase
CNQ55_RS00505	COG0786	glutamate:sodium symporter activity
CNQ55_RS00510	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CNQ55_RS00515	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CNQ55_RS00520	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CNQ55_RS00530	COG0194	GDP metabolic process
CNQ55_RS00540	COG2860	membrane
CNQ55_RS00545	COG3645	SOS response
CNQ55_RS00550	COG1561	YicC-like family, N-terminal region
CNQ55_RS00580	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CNQ55_RS00610	COG1519	Transferase
CNQ55_RS00615	COG0859	PFAM glycosyl transferase family 9
CNQ55_RS00620	COG0438	transferase activity, transferring glycosyl groups
CNQ55_RS00625	COG0515	serine threonine protein kinase
CNQ55_RS00640	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CNQ55_RS00645	COG1442	glycosyl transferase family 8
CNQ55_RS00650	COG1216	Glycosyl transferase, family 2
CNQ55_RS00655	COG3307	-O-antigen
CNQ55_RS00660	COG0859	PFAM glycosyl transferase family 9
CNQ55_RS00665	COG0859	PFAM glycosyl transferase family 9
CNQ55_RS00675	COG0156	8-amino-7-oxononanoate synthase activity
CNQ55_RS00685	COG1216	Glycosyl transferase, family 2
CNQ55_RS00690	COG2861	carbohydrate metabolic process
CNQ55_RS00695	COG4942	peptidase
CNQ55_RS00710	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CNQ55_RS00715	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CNQ55_RS00730	COG1045	serine acetyltransferase
CNQ55_RS00735	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CNQ55_RS00745	COG2186	Transcriptional regulator
CNQ55_RS00750	COG1620	l-lactate permease
CNQ55_RS00760	COG5295	Hep Hag repeat protein
CNQ55_RS00780	COG3722	fumarate hydratase activity
CNQ55_RS00790	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ55_RS00790	COG2213	PTS system mannitol-specific
CNQ55_RS00800	COG1566	PFAM secretion protein HlyD family protein
CNQ55_RS00805	COG0625	glutathione transferase activity
CNQ55_RS00815	COG3276	selenocysteine insertion sequence binding
CNQ55_RS00820	COG1454	alcohol dehydrogenase
CNQ55_RS00825	COG1012	belongs to the aldehyde dehydrogenase family
CNQ55_RS00830	COG0235	Class ii aldolase
CNQ55_RS00835	COG3623	hexulose-6-phosphate isomerase
CNQ55_RS00840	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
CNQ55_RS00850	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CNQ55_RS00855	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CNQ55_RS00860	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
CNQ55_RS00870	COG2731	YhcH YjgK YiaL family protein
CNQ55_RS00880	COG1414	Transcriptional regulator
CNQ55_RS00885	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CNQ55_RS00890	COG3977	Valine--pyruvate aminotransferase
CNQ55_RS00895	COG0366	Alpha amylase catalytic
CNQ55_RS00900	COG2992	FlgJ-related protein
CNQ55_RS00905	COG1609	Transcriptional regulator
CNQ55_RS00905	COG2207	Transcriptional regulator
CNQ55_RS00910	COG4214	carbohydrate transport
CNQ55_RS00920	COG4213	ABC transporter substrate-binding protein
CNQ55_RS00930	COG1070	Carbohydrate kinase
CNQ55_RS00935	COG4682	membrane
CNQ55_RS00940	COG4682	membrane
CNQ55_RS00945	COG3274	enterobacterial common antigen metabolic process
CNQ55_RS00970	COG1278	Cold shock
CNQ55_RS00975	COG2944	sequence-specific DNA binding
CNQ55_RS00990	COG2885	chlorophyll binding
CNQ55_RS00995	COG0243	molybdopterin cofactor binding
CNQ55_RS01000	COG0456	acetyltransferase
CNQ55_RS01005	COG2818	Glycosylase
CNQ55_RS01010	COG5571	outer membrane autotransporter
CNQ55_RS01020	COG2223	nitrite transmembrane transporter activity
CNQ55_RS01025	COG2194	sulfuric ester hydrolase activity
CNQ55_RS01035	COG0747	negative chemotaxis
CNQ55_RS01045	COG0601	transmembrane transport
CNQ55_RS01050	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CNQ55_RS01055	COG0444	Belongs to the ABC transporter superfamily
CNQ55_RS01060	COG4608	Belongs to the ABC transporter superfamily
CNQ55_RS01065	COG0814	amino acid
CNQ55_RS01085	COG2194	sulfuric ester hydrolase activity
CNQ55_RS01110	COG1215	transferase activity, transferring glycosyl groups
CNQ55_RS01115	COG1215	transferase activity, transferring glycosyl groups
CNQ55_RS01120	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CNQ55_RS01125	COG3118	belongs to the thioredoxin family
CNQ55_RS01125	COG0457	Tetratricopeptide repeat
CNQ55_RS01130	COG2200	EAL domain
CNQ55_RS01130	COG2199	diguanylate cyclase activity
CNQ55_RS01150	COG0612	Peptidase, M16
CNQ55_RS01155	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CNQ55_RS01165	COG2200	EAL domain
CNQ55_RS01170	COG2982	Protein involved in outer membrane biogenesis
CNQ55_RS01175	COG0477	Major facilitator Superfamily
CNQ55_RS01180	COG1295	ribonuclease BN
CNQ55_RS01185	COG0583	DNA-binding transcription factor activity
CNQ55_RS01190	COG2197	response regulator
CNQ55_RS01200	COG1858	cytochrome C peroxidase
CNQ55_RS01205	COG0076	glutamate decarboxylase activity
CNQ55_RS01215	COG2207	Transcriptional regulator
CNQ55_RS01225	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CNQ55_RS01230	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CNQ55_RS01240	COG2771	luxR family
CNQ55_RS01245	COG3247	response to pH
CNQ55_RS01260	COG1285	pathogenesis
CNQ55_RS01270	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CNQ55_RS01280	COG3721	Heme iron utilization protein
CNQ55_RS01305	COG4771	TonB-dependent receptor
CNQ55_RS01310	COG3720	iron ion transport
CNQ55_RS01315	COG2197	response regulator
CNQ55_RS01325	COG3065	identical protein binding
CNQ55_RS01335	COG1393	Belongs to the ArsC family
CNQ55_RS01355	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CNQ55_RS01360	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CNQ55_RS01365	COG0339	signal peptide processing
CNQ55_RS01375	COG3104	oligopeptide transport
CNQ55_RS01385	COG0589	response to stress
CNQ55_RS01395	COG0306	phosphate transporter
CNQ55_RS01400	COG2081	HI0933 family
CNQ55_RS01415	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CNQ55_RS01420	COG0842	Transport permease protein
CNQ55_RS01420	COG1129	ABC transporter
CNQ55_RS01425	COG0842	Transport permease protein
CNQ55_RS01445	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CNQ55_RS01450	COG0601	transmembrane transport
CNQ55_RS01455	COG0747	negative chemotaxis
CNQ55_RS01460	COG2091	lysine biosynthetic process via aminoadipic acid
CNQ55_RS01465	COG0628	permease
CNQ55_RS01470	COG0477	Major facilitator Superfamily
CNQ55_RS01480	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CNQ55_RS01495	COG3714	YhhN family
CNQ55_RS01505	COG3776	membrane
CNQ55_RS01510	COG0742	ribosomal rna small subunit methyltransferase
CNQ55_RS01515	COG0552	protein localization to endoplasmic reticulum
CNQ55_RS01520	COG2884	Cell division ATP-binding protein ftsE
CNQ55_RS01525	COG2177	Part of the ABC transporter FtsEX involved in
CNQ55_RS01530	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CNQ55_RS01535	COG0683	leucine binding
CNQ55_RS01540	COG0456	acetyltransferase
CNQ55_RS01550	COG0683	leucine binding
CNQ55_RS01555	COG0559	Belongs to the binding-protein-dependent transport system permease family
CNQ55_RS01560	COG4177	L-phenylalanine transmembrane transporter activity
CNQ55_RS01565	COG0411	ABC transporter
CNQ55_RS01570	COG0410	ABC transporter
CNQ55_RS01595	COG0584	glycerophosphoryl diester phosphodiesterase
CNQ55_RS01605	COG0405	Gamma-glutamyltransferase
CNQ55_RS01625	COG3157	Type VI secretion system effector, Hcp
CNQ55_RS01630	COG1247	-acetyltransferase
CNQ55_RS01640	COG0673	inositol 2-dehydrogenase activity
CNQ55_RS01645	COG1741	Belongs to the pirin family
CNQ55_RS01650	COG1609	Transcriptional regulator
CNQ55_RS01655	COG3265	gluconokinase activity
CNQ55_RS01660	COG2610	gluconate transmembrane transporter activity
CNQ55_RS01665	COG0514	ATP-dependent DNA helicase (RecQ)
CNQ55_RS01675	COG2095	MarC family integral membrane protein
CNQ55_RS01680	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CNQ55_RS01705	COG0058	SHG alpha-glucan phosphorylase activity
CNQ55_RS01715	COG3121	Chaperone
CNQ55_RS01720	COG3188	usher protein
CNQ55_RS01760	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CNQ55_RS01775	COG1349	DNA-binding transcription factor activity
CNQ55_RS01780	COG4650	regulator
CNQ55_RS01785	COG1690	Belongs to the RtcB family
CNQ55_RS01800	COG0058	SHG alpha-glucan phosphorylase activity
CNQ55_RS01805	COG1640	4-alpha-glucanotransferase
CNQ55_RS01810	COG2610	gluconate transmembrane transporter activity
CNQ55_RS01830	COG5464	transposase or invertase
CNQ55_RS01845	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CNQ55_RS01850	COG1918	ferrous iron import across plasma membrane
CNQ55_RS01860	COG2183	response to ionizing radiation
CNQ55_RS01865	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CNQ55_RS01895	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
CNQ55_RS01905	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CNQ55_RS01910	COG1011	Hydrolase
CNQ55_RS01920	COG0494	nUDIX hydrolase
CNQ55_RS01925	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CNQ55_RS01930	COG4972	Pilus assembly protein
CNQ55_RS01935	COG3166	PFAM Fimbrial assembly family protein
CNQ55_RS01950	COG4796	Type ii and iii secretion system protein
CNQ55_RS01965	COG3266	domain, Protein
CNQ55_RS01970	COG0338	D12 class N6 adenine-specific DNA methyltransferase
CNQ55_RS01975	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CNQ55_RS01985	COG0180	Tryptophanyl-tRNA synthetase
CNQ55_RS01990	COG2188	Transcriptional regulator
CNQ55_RS02000	COG3457	Alanine racemase
CNQ55_RS02005	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
CNQ55_RS02010	COG1735	metal-dependent hydrolase with the TIM-barrel fold
CNQ55_RS02025	COG0626	cystathionine gamma-synthase activity
CNQ55_RS02040	COG2116	formate transmembrane transporter activity
CNQ55_RS02045	COG2146	nitrite reductase [NAD(P)H] activity
CNQ55_RS02050	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CNQ55_RS02060	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CNQ55_RS02070	COG2184	nucleotidyltransferase activity
CNQ55_RS02075	COG0512	Glutamine amidotransferase of anthranilate synthase
CNQ55_RS02080	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CNQ55_RS02085	COG1289	transmembrane transporter activity
CNQ55_RS02090	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CNQ55_RS02100	COG1765	OsmC-like protein
CNQ55_RS02105	COG3954	Phosphoribulokinase
CNQ55_RS02115	COG0429	hydrolase of the alpha beta-hydrolase fold
CNQ55_RS02120	COG0488	(ABC) transporter
CNQ55_RS02140	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
CNQ55_RS02145	COG1047	Peptidyl-prolyl cis-trans
CNQ55_RS02155	COG0545	Peptidyl-prolyl cis-trans isomerase
CNQ55_RS02160	COG2964	Protein conserved in bacteria
CNQ55_RS02205	COG3979	chitinase
CNQ55_RS02210	COG2906	2 iron, 2 sulfur cluster binding
CNQ55_RS02215	COG2193	ferroxidase activity
CNQ55_RS02220	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CNQ55_RS02225	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
CNQ55_RS02230	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
CNQ55_RS02235	COG3156	type II secretion system protein K
CNQ55_RS02240	COG4795	General secretion pathway protein
CNQ55_RS02245	COG2165	general secretion pathway protein
CNQ55_RS02250	COG2165	general secretion pathway protein
CNQ55_RS02255	COG2165	general secretion pathway protein
CNQ55_RS02260	COG1459	type II secretion system
CNQ55_RS02265	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CNQ55_RS02270	COG1450	Type ii and iii secretion system protein
CNQ55_RS02275	COG3031	protein transport across the cell outer membrane
CNQ55_RS02280	COG3267	Type II secretory pathway component ExeA
CNQ55_RS02280	COG3409	Peptidoglycan-binding domain 1 protein
CNQ55_RS02285	COG3409	Peptidoglycan-binding domain 1 protein
CNQ55_RS02285	COG3267	Type II secretory pathway component ExeA
CNQ55_RS02315	COG0089	rRNA binding
CNQ55_RS02405	COG0201	protein transport
CNQ55_RS02445	COG0789	Transcriptional regulator
CNQ55_RS02450	COG3036	rescue of stalled ribosome
CNQ55_RS02460	COG0569	domain protein
CNQ55_RS02480	COG0758	DNA mediated transformation
CNQ55_RS02490	COG0551	DNA topoisomerase type I activity
CNQ55_RS02510	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CNQ55_RS02540	COG1763	Mo-molybdopterin cofactor biosynthetic process
CNQ55_RS02545	COG0746	molybdenum cofactor guanylyltransferase activity
CNQ55_RS02550	COG3084	Protein conserved in bacteria
CNQ55_RS02555	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CNQ55_RS02560	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CNQ55_RS02565	COG5339	Protein conserved in bacteria
CNQ55_RS02570	COG0204	Acyl-transferase
CNQ55_RS02580	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CNQ55_RS02580	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CNQ55_RS02600	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CNQ55_RS02610	COG2204	response regulator
CNQ55_RS02615	COG3852	Histidine kinase
CNQ55_RS02620	COG0174	glutamine synthetase
CNQ55_RS02630	COG1217	gtp-binding protein TYPA
CNQ55_RS02635	COG2188	Transcriptional regulator
CNQ55_RS02640	COG1082	Xylose isomerase domain protein TIM barrel
CNQ55_RS02645	COG2271	Major facilitator Superfamily
CNQ55_RS02650	COG1349	DNA-binding transcription factor activity
CNQ55_RS02655	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CNQ55_RS02660	COG2084	Dehydrogenase
CNQ55_RS02665	COG3684	Belongs to the aldolase LacD family
CNQ55_RS02670	COG1063	alcohol dehydrogenase
CNQ55_RS02690	COG1011	Hydrolase
CNQ55_RS02705	COG0456	acetyltransferase
CNQ55_RS02715	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
CNQ55_RS02740	COG2864	formate dehydrogenase
CNQ55_RS02745	COG0437	4 iron, 4 sulfur cluster binding
CNQ55_RS02810	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CNQ55_RS02825	COG2258	MOSC domain
CNQ55_RS02830	COG2205	protein histidine kinase activity
CNQ55_RS02835	COG0745	RESPONSE REGULATOR receiver
CNQ55_RS02840	COG3678	ATP-independent chaperone mediated protein folding
CNQ55_RS02855	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CNQ55_RS02880	COG3152	Membrane
CNQ55_RS02885	COG3691	Protein conserved in bacteria
CNQ55_RS02890	COG0589	response to stress
CNQ55_RS02900	COG1494	fructose-1,6-bisphosphatase
CNQ55_RS02910	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CNQ55_RS02925	COG1575	Belongs to the MenA family. Type 1 subfamily
CNQ55_RS02940	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CNQ55_RS02945	COG1609	Transcriptional regulator
CNQ55_RS02950	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CNQ55_RS02960	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
CNQ55_RS02970	COG0626	cystathionine gamma-synthase activity
CNQ55_RS02975	COG0460	homoserine dehydrogenase
CNQ55_RS02975	COG0527	aspartate kinase activity
CNQ55_RS02985	COG0737	Belongs to the 5'-nucleotidase family
CNQ55_RS02990	COG0737	Belongs to the 5'-nucleotidase family
CNQ55_RS03000	COG0737	Belongs to the 5'-nucleotidase family
CNQ55_RS03005	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CNQ55_RS03015	COG0697	spore germination
CNQ55_RS03020	COG3738	Protein conserved in bacteria
CNQ55_RS03025	COG0371	Dehydrogenase
CNQ55_RS03030	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CNQ55_RS03035	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ55_RS03035	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ55_RS03035	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CNQ55_RS03040	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ55_RS03045	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ55_RS03050	COG1882	Formate acetyltransferase
CNQ55_RS03055	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CNQ55_RS03060	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ55_RS03065	COG2207	Transcriptional regulator
CNQ55_RS03070	COG2194	sulfuric ester hydrolase activity
CNQ55_RS03085	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CNQ55_RS03090	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CNQ55_RS03100	COG4948	Mandelate Racemase Muconate Lactonizing
CNQ55_RS03105	COG2271	Major facilitator Superfamily
CNQ55_RS03115	COG0583	DNA-binding transcription factor activity
CNQ55_RS03125	COG1473	amidohydrolase
CNQ55_RS03130	COG0477	Major facilitator Superfamily
CNQ55_RS03190	COG1126	abc transporter atp-binding protein
CNQ55_RS03195	COG0765	amino acid transport
CNQ55_RS03200	COG4597	amino acid ABC transporter
CNQ55_RS03205	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CNQ55_RS03225	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CNQ55_RS03230	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CNQ55_RS03240	COG1309	transcriptional regulator
CNQ55_RS03250	COG2189	Belongs to the N(4) N(6)-methyltransferase family
CNQ55_RS03260	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CNQ55_RS03270	COG4145	pantothenate transmembrane transporter activity
CNQ55_RS03275	COG3924	membrane
CNQ55_RS03280	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CNQ55_RS03285	COG1349	DNA-binding transcription factor activity
CNQ55_RS03295	COG1879	ABC-type sugar transport system periplasmic component
CNQ55_RS03300	COG1129	ABC transporter
CNQ55_RS03305	COG1172	Belongs to the binding-protein-dependent transport system permease family
CNQ55_RS03310	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CNQ55_RS03320	COG0439	Biotin carboxylase
CNQ55_RS03325	COG0511	ligase activity, forming carbon-carbon bonds
CNQ55_RS03340	COG0604	alcohol dehydrogenase
CNQ55_RS03345	COG2199	diguanylate cyclase activity
CNQ55_RS03345	COG2200	EAL domain
CNQ55_RS03360	COG1077	Cell shape determining protein MreB Mrl
CNQ55_RS03365	COG1792	Involved in formation and maintenance of cell shape
CNQ55_RS03370	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
CNQ55_RS03380	COG1530	ribonuclease E activity
CNQ55_RS03385	COG3164	Protein of unknown function
CNQ55_RS03390	COG0312	modulator of DNA gyrase
CNQ55_RS03395	COG0583	DNA-binding transcription factor activity
CNQ55_RS03415	COG2732	(Barnase) inhibitor
CNQ55_RS03435	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CNQ55_RS03440	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CNQ55_RS03445	COG3105	Protein conserved in bacteria
CNQ55_RS03450	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CNQ55_RS03475	COG0625	glutathione transferase activity
CNQ55_RS03480	COG2969	positive regulation of protein catabolic process
CNQ55_RS03510	COG2731	YhcH YjgK YiaL family protein
CNQ55_RS03515	COG4804	nuclease activity
CNQ55_RS03520	COG0493	'glutamate synthase
CNQ55_RS03525	COG0067	glutamate synthase
CNQ55_RS03525	COG0070	glutamate synthase
CNQ55_RS03525	COG0069	glutamate synthase activity
CNQ55_RS03540	COG1242	4 iron, 4 sulfur cluster binding
CNQ55_RS03545	COG2198	Histidine kinase
CNQ55_RS03545	COG5002	protein histidine kinase activity
CNQ55_RS03545	COG0784	Response regulator, receiver
CNQ55_RS03550	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
CNQ55_RS03560	COG0515	serine threonine protein kinase
CNQ55_RS03565	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ55_RS03580	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CNQ55_RS03585	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CNQ55_RS03590	COG1137	ATPase activity
CNQ55_RS03595	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
CNQ55_RS03600	COG3117	lipopolysaccharide transmembrane transporter activity
CNQ55_RS03605	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CNQ55_RS03610	COG0517	IMP dehydrogenase activity
CNQ55_RS03610	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CNQ55_RS03615	COG0530	calcium, potassium:sodium antiporter activity
CNQ55_RS03620	COG1127	ABC transporter
CNQ55_RS03625	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CNQ55_RS03630	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CNQ55_RS03635	COG2854	intermembrane phospholipid transfer
CNQ55_RS03640	COG3113	response to antibiotic
CNQ55_RS03645	COG5007	Belongs to the BolA IbaG family
CNQ55_RS03655	COG3423	Transcriptional regulator
CNQ55_RS03660	COG0142	geranyltranstransferase activity
CNQ55_RS03675	COG0697	spore germination
CNQ55_RS03685	COG2027	D-alanyl-D-alanine carboxypeptidase
CNQ55_RS03690	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CNQ55_RS03695	COG1534	Rna-binding protein
CNQ55_RS03705	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CNQ55_RS03710	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CNQ55_RS03720	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CNQ55_RS03735	COG2194	sulfuric ester hydrolase activity
CNQ55_RS03755	COG0195	Participates in both transcription termination and antitermination
CNQ55_RS03795	COG0513	Belongs to the DEAD box helicase family
CNQ55_RS03800	COG0814	amino acid
CNQ55_RS03805	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CNQ55_RS03810	COG0826	peptidase U32
CNQ55_RS03815	COG0826	peptidase U32
CNQ55_RS03820	COG3154	lipid carrier protein
CNQ55_RS03825	COG3153	acetyltransferase
CNQ55_RS03840	COG0693	protein deglycase activity
CNQ55_RS03845	COG0702	epimerase
CNQ55_RS03850	COG0701	Predicted permease
CNQ55_RS03855	COG2823	Periplasmic or secreted lipoprotein
CNQ55_RS03870	COG3107	peptidoglycan biosynthetic process
CNQ55_RS03875	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CNQ55_RS03880	COG0363	glucosamine-6-phosphate deaminase activity
CNQ55_RS03885	COG3716	PTS system mannose fructose sorbose family IID component
CNQ55_RS03890	COG3715	PTS system
CNQ55_RS03895	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ55_RS03905	COG2222	sugar isomerase
CNQ55_RS03910	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CNQ55_RS03915	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ55_RS03920	COG3716	PTS system mannose fructose sorbose family IID component
CNQ55_RS03930	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ55_RS03945	COG1349	DNA-binding transcription factor activity
CNQ55_RS03955	COG2002	toxin-antitoxin pair type II binding
CNQ55_RS03960	COG2721	sulfolactate sulfo-lyase activity
CNQ55_RS03965	COG2271	Major facilitator Superfamily
CNQ55_RS03975	COG2084	Dehydrogenase
CNQ55_RS03980	COG1929	Belongs to the glycerate kinase type-1 family
CNQ55_RS03995	COG0583	DNA-binding transcription factor activity
CNQ55_RS04000	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CNQ55_RS04010	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CNQ55_RS04015	COG1882	Formate acetyltransferase
CNQ55_RS04020	COG0251	oxidation-reduction process
CNQ55_RS04025	COG1760	l-serine dehydratase
CNQ55_RS04030	COG0814	amino acid
CNQ55_RS04045	COG1741	Belongs to the pirin family
CNQ55_RS04050	COG0583	DNA-binding transcription factor activity
CNQ55_RS04055	COG3152	Membrane
CNQ55_RS04060	COG0435	Glutathione S-transferase
CNQ55_RS04065	COG2259	Doxx family
CNQ55_RS04075	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
CNQ55_RS04080	COG4575	ribosome binding
CNQ55_RS04085	COG1422	Protein of unknown function (DUF1090)
CNQ55_RS04095	COG0586	Pfam SNARE associated Golgi protein
CNQ55_RS04100	COG2186	Transcriptional regulator
CNQ55_RS04125	COG2271	Major facilitator Superfamily
CNQ55_RS04135	COG2721	sulfolactate sulfo-lyase activity
CNQ55_RS04150	COG0861	Integral membrane protein TerC family
CNQ55_RS04155	COG0673	inositol 2-dehydrogenase activity
CNQ55_RS04160	COG2949	membrane
CNQ55_RS04165	COG1451	nucleotide metabolic process
CNQ55_RS04175	COG4680	protein conserved in bacteria
CNQ55_RS04180	COG5499	transcription regulator containing HTH domain
CNQ55_RS04185	COG0446	pyridine nucleotide-disulphide oxidoreductase
CNQ55_RS04185	COG1902	pentaerythritol trinitrate reductase activity
CNQ55_RS04190	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
CNQ55_RS04190	COG3408	Glycogen debranching enzyme
CNQ55_RS04200	COG0531	amino acid
CNQ55_RS04205	COG2731	YhcH YjgK YiaL family protein
CNQ55_RS04210	COG3250	beta-galactosidase activity
CNQ55_RS04215	COG1609	Transcriptional regulator
CNQ55_RS04225	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CNQ55_RS04240	COG0840	transmembrane signaling receptor activity
CNQ55_RS04245	COG1695	Transcriptional regulator
CNQ55_RS04255	COG2375	cellular response to nickel ion
CNQ55_RS04270	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CNQ55_RS04280	COG0358	DNA primase activity
CNQ55_RS04285	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CNQ55_RS04300	COG0471	metal ion transport
CNQ55_RS04305	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CNQ55_RS04330	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CNQ55_RS04345	COG4991	sh3 domain protein
CNQ55_RS04355	COG3025	triphosphatase activity
CNQ55_RS04360	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
CNQ55_RS04375	COG2268	Band 7 protein
CNQ55_RS04380	COG1585	Membrane protein implicated in regulation of membrane protease activity
CNQ55_RS04410	COG3384	dioxygenase
CNQ55_RS04420	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CNQ55_RS04430	COG0754	glutathionylspermidine amidase activity
CNQ55_RS04445	COG1538	Outer membrane efflux protein
CNQ55_RS04450	COG0494	nUDIX hydrolase
CNQ55_RS04455	COG3151	Protein conserved in bacteria
CNQ55_RS04460	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CNQ55_RS04465	COG3150	esterase
CNQ55_RS04470	COG0187	DNA topoisomerase II activity
CNQ55_RS04490	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CNQ55_RS04515	COG2211	Major facilitator Superfamily
CNQ55_RS04520	COG4774	siderophore transport
CNQ55_RS04525	COG1120	ATPase activity
CNQ55_RS04530	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CNQ55_RS04535	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CNQ55_RS04545	COG1737	Transcriptional regulator
CNQ55_RS04550	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
CNQ55_RS04555	COG2249	NAD(P)H dehydrogenase (quinone) activity
CNQ55_RS04570	COG0642	Histidine kinase
CNQ55_RS04575	COG0745	RESPONSE REGULATOR receiver
CNQ55_RS04580	COG3111	PFAM Bacterial OB fold (BOF) protein
CNQ55_RS04585	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
CNQ55_RS04590	COG4166	transmembrane transport
CNQ55_RS04595	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CNQ55_RS04600	COG0204	Acyl-transferase
CNQ55_RS04605	COG2132	Multicopper oxidase
CNQ55_RS04625	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CNQ55_RS04630	COG1063	alcohol dehydrogenase
CNQ55_RS04640	COG2186	Transcriptional regulator
CNQ55_RS04645	COG1032	radical SAM domain protein
CNQ55_RS04650	COG4238	major outer membrane lipoprotein
CNQ55_RS04660	COG0656	L-ascorbic acid biosynthetic process
CNQ55_RS04665	COG1979	alcohol dehydrogenase
CNQ55_RS04670	COG2207	Transcriptional regulator
CNQ55_RS04675	COG0586	Pfam SNARE associated Golgi protein
CNQ55_RS04680	COG0626	cystathionine gamma-synthase activity
CNQ55_RS04690	COG0811	peptide transport
CNQ55_RS04695	COG0848	biopolymer transport protein
CNQ55_RS04700	COG1028	Short-chain dehydrogenase reductase Sdr
CNQ55_RS04710	COG0667	Aldo Keto reductase
CNQ55_RS04730	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
CNQ55_RS04735	COG0437	4 iron, 4 sulfur cluster binding
CNQ55_RS04740	COG5557	Pfam Polysulphide reductase, NrfD
CNQ55_RS04745	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
CNQ55_RS04750	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
CNQ55_RS04755	COG1773	rubredoxin
CNQ55_RS04760	COG0375	protein maturation
CNQ55_RS04765	COG0298	carbon dioxide binding
CNQ55_RS04770	COG0625	glutathione transferase activity
CNQ55_RS04775	COG0754	glutathionylspermidine amidase activity
CNQ55_RS04785	COG0306	phosphate transporter
CNQ55_RS04790	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CNQ55_RS04795	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CNQ55_RS04800	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CNQ55_RS04805	COG2244	polysaccharide biosynthetic process
CNQ55_RS04815	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
CNQ55_RS04820	COG0795	lipopolysaccharide-transporting ATPase activity
CNQ55_RS04830	COG0156	8-amino-7-oxononanoate synthase activity
CNQ55_RS04835	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CNQ55_RS04850	COG0456	acetyltransferase
CNQ55_RS04855	COG2186	Transcriptional regulator
CNQ55_RS04860	COG0277	FAD linked oxidase domain protein
CNQ55_RS04865	COG0277	FAD linked oxidase domain protein
CNQ55_RS04870	COG0247	lactate metabolic process
CNQ55_RS04875	COG3193	protein, possibly involved in utilization of glycolate and propanediol
CNQ55_RS04880	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CNQ55_RS04885	COG1620	l-lactate permease
CNQ55_RS04895	COG3064	Membrane
CNQ55_RS04925	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CNQ55_RS04930	COG1459	type II secretion system
CNQ55_RS04935	COG2165	general secretion pathway protein
CNQ55_RS04965	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
CNQ55_RS04980	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CNQ55_RS04990	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CNQ55_RS05070	COG2003	Belongs to the UPF0758 family
CNQ55_RS05100	COG2020	methyltransferase activity
CNQ55_RS05105	COG3468	outer membrane autotransporter barrel domain protein
CNQ55_RS05120	COG4983	Phage plasmid primase, P4 family domain protein
CNQ55_RS05175	COG0440	acetolactate synthase activity
CNQ55_RS05180	COG1349	DNA-binding transcription factor activity
CNQ55_RS05190	COG0738	Major facilitator superfamily
CNQ55_RS05205	COG3037	sugar-specific permease SgaT UlaA
CNQ55_RS05215	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ55_RS05230	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CNQ55_RS05235	COG1028	Short-chain dehydrogenase reductase Sdr
CNQ55_RS05245	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CNQ55_RS05270	COG1216	Glycosyl transferase, family 2
CNQ55_RS05275	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CNQ55_RS05290	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CNQ55_RS05300	COG0204	Acyl-transferase
CNQ55_RS05360	COG0673	inositol 2-dehydrogenase activity
CNQ55_RS05365	COG2814	Major facilitator Superfamily
CNQ55_RS05435	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CNQ55_RS05440	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CNQ55_RS05445	COG3842	ATPase activity
CNQ55_RS05575	COG0582	viral genome integration into host DNA
CNQ55_RS05585	COG1811	Na channel or pump
CNQ55_RS05595	COG1982	Orn Lys Arg decarboxylase major
CNQ55_RS05600	COG2211	Major facilitator Superfamily
CNQ55_RS05615	COG1194	a g-specific adenine glycosylase
CNQ55_RS05630	COG3171	Protein conserved in bacteria
CNQ55_RS05640	COG0252	asparaginase activity
CNQ55_RS05650	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CNQ55_RS05655	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CNQ55_RS05665	COG0762	integral membrane protein
CNQ55_RS05670	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CNQ55_RS05675	COG2805	Type II/IV secretion system protein
CNQ55_RS05690	COG0189	ligase activity
CNQ55_RS05695	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CNQ55_RS05700	COG2356	endonuclease I
CNQ55_RS05710	COG2814	Major facilitator Superfamily
CNQ55_RS05735	COG1166	arginine decarboxylase activity
CNQ55_RS05750	COG0501	Belongs to the peptidase M48B family
CNQ55_RS05755	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CNQ55_RS05760	COG0330	HflC and HflK could
CNQ55_RS05765	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ55_RS05770	COG2213	PTS system mannitol-specific
CNQ55_RS05775	COG1063	alcohol dehydrogenase
CNQ55_RS05790	COG1072	(Pantothenic acid kinase))
CNQ55_RS05795	COG1122	ATPase activity
CNQ55_RS05835	COG0191	fructose-bisphosphate aldolase activity
CNQ55_RS05840	COG0668	transmembrane transport
CNQ55_RS05845	COG1279	arginine transmembrane transporter activity
CNQ55_RS05850	COG2968	Membrane
CNQ55_RS05855	COG0583	DNA-binding transcription factor activity
CNQ55_RS05860	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CNQ55_RS05860	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CNQ55_RS05885	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CNQ55_RS05900	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CNQ55_RS05925	COG0006	proline dipeptidase activity
CNQ55_RS05930	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CNQ55_RS05935	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CNQ55_RS05955	COG2723	6-phospho-beta-galactosidase activity
CNQ55_RS05965	COG1272	protein, Hemolysin III
CNQ55_RS05975	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
CNQ55_RS05985	COG0716	FMN binding
CNQ55_RS05990	COG4974	Belongs to the 'phage' integrase family
CNQ55_RS05995	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CNQ55_RS06000	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CNQ55_RS06010	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CNQ55_RS06025	COG2233	PERMEase
CNQ55_RS06035	COG0493	'glutamate synthase
CNQ55_RS06035	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CNQ55_RS06040	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CNQ55_RS06045	COG2252	PERMEase
CNQ55_RS06050	COG0402	S-adenosylhomocysteine deaminase activity
CNQ55_RS06055	COG2233	PERMEase
CNQ55_RS06060	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CNQ55_RS06060	COG2080	2 iron, 2 sulfur cluster binding
CNQ55_RS06065	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
CNQ55_RS06070	COG0402	S-adenosylhomocysteine deaminase activity
CNQ55_RS06075	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CNQ55_RS06075	COG0493	'glutamate synthase
CNQ55_RS06080	COG2068	MobA-Related Protein
CNQ55_RS06085	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CNQ55_RS06090	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
CNQ55_RS06090	COG3608	succinylglutamate desuccinylase aspartoacylase
CNQ55_RS06095	COG0549	Belongs to the carbamate kinase family
CNQ55_RS06105	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CNQ55_RS06110	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CNQ55_RS06115	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CNQ55_RS06120	COG3829	transcription factor binding
CNQ55_RS06125	COG2080	2 iron, 2 sulfur cluster binding
CNQ55_RS06130	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
CNQ55_RS06135	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CNQ55_RS06145	COG4942	peptidase
CNQ55_RS06155	COG0814	amino acid
CNQ55_RS06160	COG0183	Belongs to the thiolase family
CNQ55_RS06170	COG1028	Short-chain dehydrogenase reductase Sdr
CNQ55_RS06175	COG2814	Major facilitator Superfamily
CNQ55_RS06180	COG1794	racemase activity, acting on amino acids and derivatives
CNQ55_RS06185	COG0583	DNA-binding transcription factor activity
CNQ55_RS06195	COG1609	Transcriptional regulator
CNQ55_RS06210	COG0667	Aldo Keto reductase
CNQ55_RS06220	COG0861	Integral membrane protein TerC family
CNQ55_RS06235	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
CNQ55_RS06250	COG2165	general secretion pathway protein
CNQ55_RS06255	COG4795	General secretion pathway protein
CNQ55_RS06265	COG4967	type IV pilus modification protein PilV
CNQ55_RS06270	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
CNQ55_RS06275	COG1025	Belongs to the peptidase M16 family
CNQ55_RS06280	COG1074	ATP-dependent DNA helicase activity
CNQ55_RS06285	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CNQ55_RS06290	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CNQ55_RS06290	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CNQ55_RS06295	COG0860	N-Acetylmuramoyl-L-alanine amidase
CNQ55_RS06300	COG3711	transcriptional antiterminator
CNQ55_RS06305	COG1263	PTS System
CNQ55_RS06305	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ55_RS06310	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CNQ55_RS06400	COG2885	chlorophyll binding
CNQ55_RS06445	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
CNQ55_RS06450	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CNQ55_RS06455	COG2166	iron-sulfur cluster assembly
CNQ55_RS06460	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CNQ55_RS06470	COG0583	DNA-binding transcription factor activity
CNQ55_RS06475	COG2363	Small membrane protein
CNQ55_RS06485	COG1349	DNA-binding transcription factor activity
CNQ55_RS06495	COG1070	Carbohydrate kinase
CNQ55_RS06505	COG0738	Major facilitator superfamily
CNQ55_RS06510	COG0235	Class ii aldolase
CNQ55_RS06515	COG1454	alcohol dehydrogenase
CNQ55_RS06525	COG1760	l-serine dehydratase
CNQ55_RS06530	COG0814	amino acid
CNQ55_RS06535	COG1611	Belongs to the LOG family
CNQ55_RS06550	COG3098	single-species biofilm formation
CNQ55_RS06555	COG0564	pseudouridine synthase activity
CNQ55_RS06560	COG0716	FMN binding
CNQ55_RS06565	COG2271	Major facilitator Superfamily
CNQ55_RS06570	COG4948	Mandelate Racemase Muconate Lactonizing
CNQ55_RS06575	COG4948	Mandelate Racemase Muconate Lactonizing
CNQ55_RS06580	COG4999	Histidine kinase
CNQ55_RS06580	COG3850	Histidine kinase
CNQ55_RS06580	COG2205	protein histidine kinase activity
CNQ55_RS06580	COG3437	response regulator, receiver
CNQ55_RS06590	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CNQ55_RS06595	COG2336	PFAM SpoVT AbrB
CNQ55_RS06600	COG2337	Toxic component of a toxin-antitoxin (TA) module
CNQ55_RS06605	COG3956	TIGRFAM MazG family protein
CNQ55_RS06620	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
CNQ55_RS06630	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
CNQ55_RS06640	COG0602	queuosine metabolic process
CNQ55_RS06670	COG1070	Carbohydrate kinase
CNQ55_RS06675	COG2223	nitrite transmembrane transporter activity
CNQ55_RS06680	COG1028	Short-chain dehydrogenase reductase Sdr
CNQ55_RS06685	COG0277	FAD linked oxidase domain protein
CNQ55_RS06690	COG0477	Major facilitator Superfamily
CNQ55_RS06695	COG2086	electron transfer activity
CNQ55_RS06700	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CNQ55_RS06705	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CNQ55_RS06710	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
CNQ55_RS06715	COG0644	oxidoreductase
CNQ55_RS06720	COG0720	synthase
CNQ55_RS06750	COG2234	aminopeptidase activity
CNQ55_RS06805	COG4942	peptidase
CNQ55_RS06805	COG1388	LysM domain
CNQ55_RS06810	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CNQ55_RS06825	COG2610	gluconate transmembrane transporter activity
CNQ55_RS06830	COG3622	Belongs to the hyi family
CNQ55_RS06835	COG0235	Class ii aldolase
CNQ55_RS06840	COG3395	kinase activity
CNQ55_RS06845	COG2084	Dehydrogenase
CNQ55_RS06850	COG1349	DNA-binding transcription factor activity
CNQ55_RS06855	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CNQ55_RS06885	COG3335	DDE superfamily endonuclease
CNQ55_RS06925	COG3604	Transcriptional regulator
CNQ55_RS06930	COG0309	Hydrogenase expression formation protein (HypE)
CNQ55_RS06935	COG0409	Hydrogenase expression formation protein
CNQ55_RS06940	COG0298	carbon dioxide binding
CNQ55_RS06945	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
CNQ55_RS06950	COG0375	protein maturation
CNQ55_RS06965	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CNQ55_RS06970	COG0651	ATP synthesis coupled electron transport
CNQ55_RS06975	COG0650	Formate hydrogenlyase subunit 4
CNQ55_RS06980	COG3261	NADH dehydrogenase
CNQ55_RS06980	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
CNQ55_RS06985	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CNQ55_RS06990	COG3260	NADH ubiquinone oxidoreductase 20
CNQ55_RS07000	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
CNQ55_RS07010	COG5499	transcription regulator containing HTH domain
CNQ55_RS07015	COG2723	6-phospho-beta-galactosidase activity
CNQ55_RS07020	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ55_RS07020	COG1263	PTS System
CNQ55_RS07025	COG1609	Transcriptional regulator
CNQ55_RS07030	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CNQ55_RS07035	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
CNQ55_RS07055	COG0517	IMP dehydrogenase activity
CNQ55_RS07055	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CNQ55_RS07060	COG1349	DNA-binding transcription factor activity
CNQ55_RS07065	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ55_RS07070	COG1028	Short-chain dehydrogenase reductase Sdr
CNQ55_RS07080	COG3732	PTS system glucitol sorbitol-specific
CNQ55_RS07085	COG3730	PTS system glucitol sorbitol-specific
CNQ55_RS07090	COG2951	lytic endotransglycosylase activity
CNQ55_RS07095	COG1546	Belongs to the CinA family
CNQ55_RS07115	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
CNQ55_RS07145	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CNQ55_RS07150	COG1238	metal cluster binding
CNQ55_RS07165	COG2814	Major facilitator Superfamily
CNQ55_RS07170	COG1566	PFAM secretion protein HlyD family protein
CNQ55_RS07175	COG1846	Transcriptional regulator
CNQ55_RS07185	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
CNQ55_RS07190	COG2814	Major facilitator Superfamily
CNQ55_RS07195	COG2113	Glycine betaine
CNQ55_RS07200	COG4176	ABC-type proline glycine betaine transport system permease component
CNQ55_RS07205	COG4175	Glycine betaine
CNQ55_RS07215	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CNQ55_RS07220	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CNQ55_RS07230	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CNQ55_RS07240	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CNQ55_RS07250	COG4575	ribosome binding
CNQ55_RS07265	COG2916	Histone family protein nucleoid-structuring protein H-NS
CNQ55_RS07275	COG0640	Transcriptional regulator
CNQ55_RS07280	COG0401	homolog of Blt101
CNQ55_RS07285	COG1652	LysM domain
CNQ55_RS07290	COG1802	Transcriptional regulator
CNQ55_RS07295	COG1113	amino acid transport
CNQ55_RS07300	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CNQ55_RS07305	COG1012	belongs to the aldehyde dehydrogenase family
CNQ55_RS07310	COG0579	oxidoreductase
CNQ55_RS07335	COG2867	negative regulation of translational initiation
CNQ55_RS07345	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CNQ55_RS07350	COG0497	DNA recombination
CNQ55_RS07370	COG4536	flavin adenine dinucleotide binding
CNQ55_RS07375	COG4137	Cytochrome C assembly protein
CNQ55_RS07380	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CNQ55_RS07405	COG2885	chlorophyll binding
CNQ55_RS07410	COG2199	diguanylate cyclase activity
CNQ55_RS07425	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CNQ55_RS07430	COG0287	Prephenate dehydrogenase
CNQ55_RS07430	COG1605	Chorismate mutase
CNQ55_RS07435	COG0077	Prephenate dehydratase
CNQ55_RS07435	COG1605	Chorismate mutase
CNQ55_RS07440	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CNQ55_RS07450	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CNQ55_RS07455	COG0564	pseudouridine synthase activity
CNQ55_RS07465	COG0542	response to heat
CNQ55_RS07495	COG2801	Transposase and inactivated derivatives
CNQ55_RS07515	COG0477	Major facilitator Superfamily
CNQ55_RS07520	COG5544	Lipoprotein
CNQ55_RS07525	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CNQ55_RS07530	COG0045	succinate-CoA ligase (ADP-forming) activity
CNQ55_RS07530	COG1042	CoA-binding domain protein
CNQ55_RS07530	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CNQ55_RS07535	COG3148	PFAM DTW domain containing protein
CNQ55_RS07540	COG3118	belongs to the thioredoxin family
CNQ55_RS07550	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CNQ55_RS07570	COG0583	DNA-binding transcription factor activity
CNQ55_RS07575	COG0513	Belongs to the DEAD box helicase family
CNQ55_RS07585	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CNQ55_RS07590	COG1595	DNA-templated transcription, initiation
CNQ55_RS07595	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
CNQ55_RS07600	COG3026	antisigma factor binding
CNQ55_RS07605	COG3086	response to oxidative stress
CNQ55_RS07615	COG0681	Belongs to the peptidase S26 family
CNQ55_RS07640	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CNQ55_RS07660	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CNQ55_RS07665	COG1737	Transcriptional regulator
CNQ55_RS07670	COG0560	Phosphoserine phosphatase
CNQ55_RS07675	COG0590	tRNA wobble adenosine to inosine editing
CNQ55_RS07695	COG2205	protein histidine kinase activity
CNQ55_RS07700	COG3170	Tfp pilus assembly protein FimV
CNQ55_RS07705	COG2204	response regulator
CNQ55_RS07710	COG0347	Belongs to the P(II) protein family
CNQ55_RS07715	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CNQ55_RS07715	COG1017	nitric oxide dioxygenase activity
CNQ55_RS07725	COG1940	carbohydrate kinase activity
CNQ55_RS07730	COG0457	Tetratricopeptide repeat
CNQ55_RS07735	COG1879	ABC-type sugar transport system periplasmic component
CNQ55_RS07740	COG1129	ABC transporter
CNQ55_RS07745	COG1172	Belongs to the binding-protein-dependent transport system permease family
CNQ55_RS07750	COG1063	alcohol dehydrogenase
CNQ55_RS07755	COG2017	converts alpha-aldose to the beta-anomer
CNQ55_RS07760	COG2801	Transposase and inactivated derivatives
CNQ55_RS07770	COG2259	Doxx family
CNQ55_RS07775	COG2814	Major facilitator Superfamily
CNQ55_RS07780	COG3711	transcriptional antiterminator
CNQ55_RS07785	COG1073	alpha beta
CNQ55_RS07790	COG0483	inositol monophosphate 1-phosphatase activity
CNQ55_RS07810	COG0822	iron-sulfur transferase activity
CNQ55_RS07830	COG0633	Ferredoxin
CNQ55_RS07835	COG2975	iron-sulfur cluster assembly
CNQ55_RS07850	COG2897	thiosulfate sulfurtransferase activity
CNQ55_RS07855	COG2373	Large extracellular alpha-helical protein
CNQ55_RS07860	COG4953	penicillin-binding protein 1C
CNQ55_RS07890	COG2976	Protein conserved in bacteria
CNQ55_RS07905	COG1645	bacterial-type flagellum-dependent swarming motility
CNQ55_RS07930	COG0517	IMP dehydrogenase activity
CNQ55_RS07930	COG0516	GMP reductase activity
CNQ55_RS07945	COG3133	Outer membrane lipoprotein
CNQ55_RS07965	COG2200	EAL domain
CNQ55_RS07970	COG0248	Ppx GppA phosphatase
CNQ55_RS07975	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CNQ55_RS07980	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CNQ55_RS08000	COG2233	PERMEase
CNQ55_RS08010	COG1393	Belongs to the ArsC family
CNQ55_RS08015	COG4783	chaperone-mediated protein folding
CNQ55_RS08020	COG0628	permease
CNQ55_RS08025	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CNQ55_RS08030	COG2716	regulation of RNA biosynthetic process
CNQ55_RS08040	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
CNQ55_RS08050	COG2321	neutral zinc metallopeptidase
CNQ55_RS08060	COG0400	carboxylic ester hydrolase activity
CNQ55_RS08075	COG1393	Belongs to the ArsC family
CNQ55_RS08080	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CNQ55_RS08085	COG3850	Histidine kinase
CNQ55_RS08090	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CNQ55_RS08090	COG0493	'glutamate synthase
CNQ55_RS08105	COG5342	invasion associated locus B
CNQ55_RS08110	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CNQ55_RS08115	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CNQ55_RS08125	COG0280	phosphate acetyltransferase
CNQ55_RS08125	COG0281	malic enzyme
CNQ55_RS08135	COG4810	utilization protein
CNQ55_RS08140	COG4917	ethanolamine utilization protein
CNQ55_RS08145	COG4766	ethanolamine catabolic process
CNQ55_RS08150	COG4812	Cobalamin adenosyltransferase
CNQ55_RS08155	COG0280	phosphate acetyltransferase
CNQ55_RS08160	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
CNQ55_RS08165	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
CNQ55_RS08170	COG1012	belongs to the aldehyde dehydrogenase family
CNQ55_RS08175	COG4820	ethanolamine utilization protein (EutJ)
CNQ55_RS08180	COG1454	alcohol dehydrogenase
CNQ55_RS08185	COG3192	ethanolamine utilization protein
CNQ55_RS08190	COG4819	ethanolamine utilization protein
CNQ55_RS08195	COG4303	Ethanolamine ammonia lyase large subunit
CNQ55_RS08205	COG4816	utilization protein
CNQ55_RS08210	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
CNQ55_RS08215	COG2207	Transcriptional regulator
CNQ55_RS08225	COG0860	N-Acetylmuramoyl-L-alanine amidase
CNQ55_RS08245	COG2837	iron assimilation
CNQ55_RS08255	COG1263	PTS System
CNQ55_RS08255	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ55_RS08265	COG1028	Short-chain dehydrogenase reductase Sdr
CNQ55_RS08270	COG4150	thiosulfate binding
CNQ55_RS08275	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CNQ55_RS08280	COG4208	sulfate ABC transporter
CNQ55_RS08285	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CNQ55_RS08290	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CNQ55_RS08305	COG2190	(PTS) system
CNQ55_RS08310	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CNQ55_RS08315	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ55_RS08320	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CNQ55_RS08340	COG3530	Putative quorum-sensing-regulated virulence factor
CNQ55_RS08345	COG0385	Bile acid
CNQ55_RS08350	COG0583	DNA-binding transcription factor activity
CNQ55_RS08360	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
CNQ55_RS08365	COG2211	Major facilitator Superfamily
CNQ55_RS08375	COG0583	DNA-binding transcription factor activity
CNQ55_RS08405	COG3415	Transposase
CNQ55_RS08410	COG3415	Transposase
CNQ55_RS08425	COG2200	EAL domain
CNQ55_RS08425	COG2199	diguanylate cyclase activity
CNQ55_RS08430	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CNQ55_RS08455	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ55_RS08460	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ55_RS08465	COG0006	proline dipeptidase activity
CNQ55_RS08470	COG1363	Peptidase, m42
CNQ55_RS08475	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ55_RS08475	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ55_RS08475	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CNQ55_RS08480	COG2207	Transcriptional regulator
CNQ55_RS08485	COG3279	Response regulator of the LytR AlgR family
CNQ55_RS08490	COG3275	phosphorelay sensor kinase activity
CNQ55_RS08495	COG0436	Aminotransferase
CNQ55_RS08500	COG1560	Kdo2-lipid A biosynthetic process
CNQ55_RS08525	COG0028	Belongs to the TPP enzyme family
CNQ55_RS08530	COG0679	Auxin Efflux Carrier
CNQ55_RS08535	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CNQ55_RS08540	COG2198	Histidine kinase
CNQ55_RS08540	COG2205	protein histidine kinase activity
CNQ55_RS08540	COG0784	Response regulator, receiver
CNQ55_RS08540	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CNQ55_RS08545	COG2197	response regulator
CNQ55_RS08550	COG1566	PFAM secretion protein HlyD family protein
CNQ55_RS08555	COG0477	Major facilitator Superfamily
CNQ55_RS08600	COG2116	formate transmembrane transporter activity
CNQ55_RS08615	COG2067	long-chain fatty acid transport protein
CNQ55_RS08625	COG3691	Protein conserved in bacteria
CNQ55_RS08640	COG2062	phosphohistidine phosphatase, SixA
CNQ55_RS08645	COG3539	Fimbrial protein
CNQ55_RS08650	COG3188	usher protein
CNQ55_RS08655	COG3121	Chaperone
CNQ55_RS08660	COG3539	Fimbrial protein
CNQ55_RS08665	COG3539	Fimbrial protein
CNQ55_RS08670	COG3539	Fimbrial protein
CNQ55_RS08705	COG0730	response to heat
CNQ55_RS08710	COG3101	peptidyl-lysine hydroxylation
CNQ55_RS08725	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CNQ55_RS08735	COG2814	Major facilitator Superfamily
CNQ55_RS08750	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CNQ55_RS08760	COG0586	Pfam SNARE associated Golgi protein
CNQ55_RS08770	COG0285	dihydrofolate synthase activity
CNQ55_RS08775	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
CNQ55_RS08780	COG1286	toxin biosynthetic process
CNQ55_RS08785	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CNQ55_RS08790	COG0163	prenyltransferase activity
CNQ55_RS08795	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CNQ55_RS08800	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CNQ55_RS08805	COG4215	(ABC) transporter
CNQ55_RS08810	COG4160	amino acid transport
CNQ55_RS08815	COG4598	ABC transporter
CNQ55_RS08820	COG5464	transposase or invertase
CNQ55_RS08825	COG1090	epimerase
CNQ55_RS08830	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CNQ55_RS08835	COG0625	glutathione transferase activity
CNQ55_RS08840	COG0625	glutathione transferase activity
CNQ55_RS08845	COG0622	Phosphoesterase
CNQ55_RS08850	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
CNQ55_RS08855	COG1288	antiporter activity
CNQ55_RS08860	COG0857	belongs to the CobB CobQ family
CNQ55_RS08860	COG0280	phosphate acetyltransferase
CNQ55_RS08865	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CNQ55_RS08880	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CNQ55_RS08885	COG0471	metal ion transport
CNQ55_RS08885	COG0490	domain, Protein
CNQ55_RS08895	COG0436	Aminotransferase
CNQ55_RS08905	COG0583	DNA-binding transcription factor activity
CNQ55_RS08925	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
CNQ55_RS08930	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
CNQ55_RS08935	COG1034	ATP synthesis coupled electron transport
CNQ55_RS08950	COG0839	Belongs to the complex I subunit 6 family
CNQ55_RS08960	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CNQ55_RS08965	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CNQ55_RS08980	COG2234	aminopeptidase activity
CNQ55_RS08985	COG5160	protein modification by small protein removal
CNQ55_RS08995	COG2153	protein acetylation
CNQ55_RS09000	COG4575	ribosome binding
CNQ55_RS09005	COG1169	isochorismate synthase
CNQ55_RS09020	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CNQ55_RS09030	COG0318	PFAM AMP-dependent synthetase and ligase
CNQ55_RS09095	COG1414	Transcriptional regulator
CNQ55_RS09105	COG2271	Major facilitator Superfamily
CNQ55_RS09120	COG5464	transposase or invertase
CNQ55_RS09125	COG0247	lactate metabolic process
CNQ55_RS09135	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CNQ55_RS09140	COG2271	Major facilitator Superfamily
CNQ55_RS09145	COG0584	glycerophosphoryl diester phosphodiesterase
CNQ55_RS09150	COG3642	lipopolysaccharide core region biosynthetic process
CNQ55_RS09155	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CNQ55_RS09160	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CNQ55_RS09165	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CNQ55_RS09170	COG3468	outer membrane autotransporter barrel domain protein
CNQ55_RS09180	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CNQ55_RS09185	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
CNQ55_RS09190	COG3234	Protein of unknown function (DUF1175)
CNQ55_RS09195	COG2373	Large extracellular alpha-helical protein
CNQ55_RS09200	COG5445	Predicted secreted protein (DUF2300)
CNQ55_RS09205	COG4676	Protein conserved in bacteria
CNQ55_RS09210	COG0183	Belongs to the thiolase family
CNQ55_RS09215	COG2031	fatty acid transporter
CNQ55_RS09220	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CNQ55_RS09225	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CNQ55_RS09230	COG2204	response regulator
CNQ55_RS09235	COG3852	Histidine kinase
CNQ55_RS09240	COG0784	Response regulator, receiver
CNQ55_RS09240	COG2205	protein histidine kinase activity
CNQ55_RS09245	COG2197	response regulator
CNQ55_RS09250	COG0642	Histidine kinase
CNQ55_RS09250	COG2198	Histidine kinase
CNQ55_RS09265	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CNQ55_RS09270	COG1477	protein flavinylation
CNQ55_RS09275	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CNQ55_RS09275	COG2169	Transcriptional regulator
CNQ55_RS09280	COG3145	DNA-N1-methyladenine dioxygenase activity
CNQ55_RS09285	COG4615	Cyclic peptide transporter
CNQ55_RS09305	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
CNQ55_RS09305	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CNQ55_RS09310	COG3062	negative regulation of establishment of protein localization
CNQ55_RS09320	COG0437	4 iron, 4 sulfur cluster binding
CNQ55_RS09325	COG0348	domain, Protein
CNQ55_RS09330	COG3043	anaerobic respiration
CNQ55_RS09335	COG3005	denitrification pathway
CNQ55_RS09340	COG4133	protoheme IX ABC transporter activity
CNQ55_RS09345	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CNQ55_RS09350	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CNQ55_RS09355	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CNQ55_RS09365	COG1138	Cytochrome C-type biogenesis protein
CNQ55_RS09370	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CNQ55_RS09375	COG4235	cytochrome complex assembly
CNQ55_RS09375	COG3088	subunit of a heme lyase
CNQ55_RS09380	COG2197	response regulator
CNQ55_RS09395	COG3083	sulfuric ester hydrolase activity
CNQ55_RS09415	COG1061	Type III restriction enzyme res subunit
CNQ55_RS09425	COG1187	pseudouridine synthase activity
CNQ55_RS09430	COG2814	Major facilitator Superfamily
CNQ55_RS09445	COG4172	Belongs to the ABC transporter superfamily
CNQ55_RS09450	COG4239	(ABC) transporter, permease
CNQ55_RS09455	COG4174	ABC transporter (Permease)
CNQ55_RS09460	COG4166	transmembrane transport
CNQ55_RS09465	COG2200	EAL domain
CNQ55_RS09470	COG0791	NLP P60 protein
CNQ55_RS09475	COG0671	phosphoesterase, PA-phosphatase related
CNQ55_RS09480	COG0523	cobalamin synthesis protein
CNQ55_RS09485	COG0246	Mannitol dehydrogenase
CNQ55_RS09500	COG2814	Major facilitator Superfamily
CNQ55_RS09505	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ55_RS09505	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ55_RS09510	COG1105	Belongs to the carbohydrate kinase PfkB family
CNQ55_RS09515	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ55_RS09515	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CNQ55_RS09515	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
CNQ55_RS09525	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CNQ55_RS09530	COG2313	pseudouridylate synthase activity
CNQ55_RS09535	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CNQ55_RS09540	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CNQ55_RS09550	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CNQ55_RS09555	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CNQ55_RS09555	COG1522	sequence-specific DNA binding
CNQ55_RS09565	COG2855	membrane
CNQ55_RS09570	COG0583	DNA-binding transcription factor activity
CNQ55_RS09580	COG0833	amino acid
CNQ55_RS09590	COG4771	TonB-dependent receptor
CNQ55_RS09615	COG2311	Membrane
CNQ55_RS09625	COG1609	Transcriptional regulator
CNQ55_RS09630	COG1879	ABC-type sugar transport system periplasmic component
CNQ55_RS09640	COG4211	Belongs to the binding-protein-dependent transport system permease family
CNQ55_RS09645	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
CNQ55_RS09645	COG0167	dihydroorotate dehydrogenase activity
CNQ55_RS09650	COG0493	'glutamate synthase
CNQ55_RS09660	COG2949	membrane
CNQ55_RS09670	COG1346	cytolysis
CNQ55_RS09680	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CNQ55_RS09700	COG1538	Outer membrane efflux protein
CNQ55_RS09705	COG1028	Short-chain dehydrogenase reductase Sdr
CNQ55_RS09710	COG0586	Pfam SNARE associated Golgi protein
CNQ55_RS09720	COG1686	Belongs to the peptidase S11 family
CNQ55_RS09725	COG0277	FAD linked oxidase domain protein
CNQ55_RS09730	COG1472	Belongs to the glycosyl hydrolase 3 family
CNQ55_RS09735	COG1732	Glycine betaine
CNQ55_RS09740	COG1174	glycine betaine transport
CNQ55_RS09745	COG1125	glycine betaine transport
CNQ55_RS09750	COG1174	glycine betaine transport
CNQ55_RS09760	COG0789	Transcriptional regulator
CNQ55_RS09765	COG3275	phosphorelay sensor kinase activity
CNQ55_RS09770	COG3279	Response regulator of the LytR AlgR family
CNQ55_RS09775	COG4807	Protein conserved in bacteria
CNQ55_RS09780	COG4808	Protein conserved in bacteria
CNQ55_RS09785	COG4715	Zinc finger, swim domain protein
CNQ55_RS09790	COG3552	Protein containing von Willebrand factor type A (VWA) domain
CNQ55_RS09795	COG2425	protein containing a von Willebrand factor type A (vWA) domain
CNQ55_RS09800	COG0714	Associated with various cellular activities
CNQ55_RS09810	COG3831	ATPase activity
CNQ55_RS09815	COG3831	ATPase activity
CNQ55_RS09825	COG0489	protein tyrosine kinase activity
CNQ55_RS09840	COG3539	Fimbrial protein
CNQ55_RS09845	COG3121	Chaperone
CNQ55_RS09850	COG3188	usher protein
CNQ55_RS09855	COG3539	Fimbrial protein
CNQ55_RS09860	COG5455	response to cobalt ion
CNQ55_RS09880	COG0351	phosphomethylpyrimidine kinase
CNQ55_RS09885	COG3757	hydrolase, family 25
CNQ55_RS09890	COG2188	Transcriptional regulator
CNQ55_RS09895	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CNQ55_RS09900	COG1397	ADP-ribosylglycohydrolase
CNQ55_RS09905	COG2211	Major facilitator Superfamily
CNQ55_RS09910	COG1830	Aldolase
CNQ55_RS09930	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ55_RS09935	COG3414	Phosphotransferase system galactitol-specific IIB component
CNQ55_RS09940	COG3775	system Galactitol-specific IIC component
CNQ55_RS09965	COG4974	Belongs to the 'phage' integrase family
CNQ55_RS10020	COG4695	Portal protein
CNQ55_RS10115	COG5301	cellulose 1,4-beta-cellobiosidase activity
CNQ55_RS10180	COG0826	peptidase U32
CNQ55_RS10215	COG0745	RESPONSE REGULATOR receiver
CNQ55_RS10220	COG2205	protein histidine kinase activity
CNQ55_RS10245	COG4245	von Willebrand factor, type A
CNQ55_RS10250	COG0631	protein serine/threonine phosphatase activity
CNQ55_RS10255	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
CNQ55_RS10260	COG0443	Heat shock 70 kDa protein
CNQ55_RS10265	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CNQ55_RS10270	COG5001	Diguanylate cyclase
CNQ55_RS10270	COG5002	protein histidine kinase activity
CNQ55_RS10270	COG3447	MASE1 domain protein
CNQ55_RS10275	COG0572	uridine kinase
CNQ55_RS10285	COG2982	Protein involved in outer membrane biogenesis
CNQ55_RS10290	COG1253	flavin adenine dinucleotide binding
CNQ55_RS10295	COG1596	polysaccharide export
CNQ55_RS10300	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CNQ55_RS10305	COG3206	protein involved in exopolysaccharide biosynthesis
CNQ55_RS10305	COG0489	protein tyrosine kinase activity
CNQ55_RS10310	COG0463	Glycosyl transferase, family 2
CNQ55_RS10315	COG1045	serine acetyltransferase
CNQ55_RS10320	COG0438	transferase activity, transferring glycosyl groups
CNQ55_RS10330	COG1216	Glycosyl transferase, family 2
CNQ55_RS10335	COG0110	maltose O-acetyltransferase activity
CNQ55_RS10340	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
CNQ55_RS10345	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CNQ55_RS10350	COG1051	belongs to the nudix hydrolase family
CNQ55_RS10355	COG0297	glycogen (starch) synthase activity
CNQ55_RS10360	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
CNQ55_RS10360	COG0662	Cupin 2, conserved barrel domain protein
CNQ55_RS10365	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CNQ55_RS10370	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CNQ55_RS10375	COG2244	polysaccharide biosynthetic process
CNQ55_RS10380	COG2327	Polysaccharide pyruvyl transferase
CNQ55_RS10385	COG0438	transferase activity, transferring glycosyl groups
CNQ55_RS10395	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CNQ55_RS10415	COG1216	Glycosyl transferase, family 2
CNQ55_RS10430	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CNQ55_RS10445	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CNQ55_RS10450	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CNQ55_RS10455	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CNQ55_RS10460	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
CNQ55_RS10465	COG0140	phosphoribosyl-ATP diphosphatase activity
CNQ55_RS10465	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CNQ55_RS10480	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CNQ55_RS10485	COG0131	Imidazoleglycerol-phosphate dehydratase
CNQ55_RS10485	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CNQ55_RS10495	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CNQ55_RS10515	COG2161	toxin-antitoxin pair type II binding
CNQ55_RS10520	COG4115	mRNA cleavage
CNQ55_RS10525	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CNQ55_RS10530	COG0583	DNA-binding transcription factor activity
CNQ55_RS10535	COG0531	amino acid
CNQ55_RS10540	COG2925	Exonuclease
CNQ55_RS10545	COG1686	Belongs to the peptidase S11 family
CNQ55_RS10555	COG1289	transmembrane transporter activity
CNQ55_RS10595	COG2003	Belongs to the UPF0758 family
CNQ55_RS10655	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CNQ55_RS10660	COG1120	ATPase activity
CNQ55_RS10730	COG3547	Transposase (IS116 IS110 IS902 family)
CNQ55_RS10780	COG1735	metal-dependent hydrolase with the TIM-barrel fold
CNQ55_RS10795	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CNQ55_RS10815	COG1215	transferase activity, transferring glycosyl groups
CNQ55_RS10820	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CNQ55_RS10825	COG3969	phosphoadenosine phosphosulfate
CNQ55_RS10830	COG1475	DNA binding
CNQ55_RS10835	COG4771	TonB-dependent receptor
CNQ55_RS10860	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
CNQ55_RS10875	COG1376	ErfK ybiS ycfS ynhG family protein
CNQ55_RS10905	COG2197	response regulator
CNQ55_RS10925	COG1250	3-hydroxyacyl-CoA dehydrogenase
CNQ55_RS10930	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CNQ55_RS10935	COG1960	acyl-CoA dehydrogenase activity
CNQ55_RS10965	COG0154	amidase activity
CNQ55_RS10990	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
CNQ55_RS11005	COG0582	viral genome integration into host DNA
CNQ55_RS11015	COG0534	Mate efflux family protein
CNQ55_RS11025	COG0583	DNA-binding transcription factor activity
CNQ55_RS11030	COG0583	DNA-binding transcription factor activity
CNQ55_RS11045	COG0217	transcriptional regulatory protein
CNQ55_RS11050	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CNQ55_RS11055	COG0477	Major facilitator Superfamily
CNQ55_RS11070	COG1470	cell adhesion involved in biofilm formation
CNQ55_RS11070	COG1388	LysM domain
CNQ55_RS11075	COG1388	LysM domain
CNQ55_RS11075	COG1470	cell adhesion involved in biofilm formation
CNQ55_RS11080	COG1388	LysM domain
CNQ55_RS11080	COG4932	domain protein
CNQ55_RS11080	COG2373	Large extracellular alpha-helical protein
CNQ55_RS11085	COG4771	TonB-dependent receptor
CNQ55_RS11090	COG1021	2,3-dihydroxybenzoate-AMP ligase
CNQ55_RS11110	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CNQ55_RS11110	COG2226	methyltransferase
CNQ55_RS11110	COG3433	isochorismatase activity
CNQ55_RS11125	COG1132	(ABC) transporter
CNQ55_RS11130	COG2814	Major facilitator Superfamily
CNQ55_RS11135	COG1169	isochorismate synthase
CNQ55_RS11140	COG0582	viral genome integration into host DNA
CNQ55_RS11165	COG3443	Belongs to the bacterial solute-binding protein 9 family
CNQ55_RS11180	COG2351	hydroxyisourate hydrolase activity
CNQ55_RS11185	COG0745	RESPONSE REGULATOR receiver
CNQ55_RS11190	COG2205	protein histidine kinase activity
CNQ55_RS11205	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CNQ55_RS11215	COG1418	mRNA catabolic process
CNQ55_RS11220	COG0270	DNA (cytosine-5-)-methyltransferase activity
CNQ55_RS11225	COG3727	T/G mismatch-specific endonuclease activity
CNQ55_RS11230	COG0697	spore germination
CNQ55_RS11235	COG2354	Protein conserved in bacteria
CNQ55_RS11240	COG5475	Uncharacterized small protein (DUF2158)
CNQ55_RS11275	COG2197	response regulator
CNQ55_RS11280	COG1684	flagellar biosynthetic protein fliR
CNQ55_RS11285	COG1987	bacterial-type flagellum assembly
CNQ55_RS11290	COG1338	Plays a role in the flagellum-specific transport system
CNQ55_RS11295	COG3190	flagellar
CNQ55_RS11300	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CNQ55_RS11305	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CNQ55_RS11310	COG1580	Controls the rotational direction of flagella during chemotaxis
CNQ55_RS11315	COG3144	bacterial-type flagellum assembly
CNQ55_RS11320	COG2882	bacterial-type flagellum organization
CNQ55_RS11325	COG1157	protein secretion by the type III secretion system
CNQ55_RS11330	COG1317	bacterial-type flagellum organization
CNQ55_RS11335	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CNQ55_RS11340	COG1766	The M ring may be actively involved in energy transduction
CNQ55_RS11360	COG2076	Multidrug Resistance protein
CNQ55_RS11365	COG1881	PFAM PEBP family protein
CNQ55_RS11370	COG2207	Transcriptional regulator
CNQ55_RS11390	COG2135	peptidase activity
CNQ55_RS11395	COG0425	Belongs to the sulfur carrier protein TusA family
CNQ55_RS11400	COG2391	methyltransferase activity
CNQ55_RS11415	COG0366	Alpha amylase catalytic
CNQ55_RS11425	COG1516	flagellar protein fliS
CNQ55_RS11430	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CNQ55_RS11445	COG1191	sigma factor activity
CNQ55_RS11455	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CNQ55_RS11465	COG0765	amino acid transport
CNQ55_RS11470	COG1126	abc transporter atp-binding protein
CNQ55_RS11475	COG2197	response regulator
CNQ55_RS11485	COG2197	response regulator
CNQ55_RS11515	COG3012	SEC-C Motif Domain Protein
CNQ55_RS11515	COG3318	Belongs to the UPF0149 family
CNQ55_RS11520	COG0814	amino acid
CNQ55_RS11530	COG1528	Iron-storage protein
CNQ55_RS11555	COG1528	Iron-storage protein
CNQ55_RS11565	COG1879	ABC-type sugar transport system periplasmic component
CNQ55_RS11575	COG1172	Belongs to the binding-protein-dependent transport system permease family
CNQ55_RS11580	COG1877	trehalose-phosphatase activity
CNQ55_RS11590	COG0589	response to stress
CNQ55_RS11605	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CNQ55_RS11610	COG1360	Flagellar Motor Protein
CNQ55_RS11615	COG0643	Histidine kinase
CNQ55_RS11615	COG2198	Histidine kinase
CNQ55_RS11620	COG0835	chemotaxis
CNQ55_RS11625	COG0840	transmembrane signaling receptor activity
CNQ55_RS11635	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CNQ55_RS11645	COG0745	RESPONSE REGULATOR receiver
CNQ55_RS11650	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
CNQ55_RS11655	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CNQ55_RS11660	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CNQ55_RS11680	COG3102	Protein conserved in bacteria
CNQ55_RS11690	COG3005	denitrification pathway
CNQ55_RS11695	COG0243	molybdopterin cofactor binding
CNQ55_RS11710	COG3788	relative of glutathione S-transferase, MAPEG superfamily
CNQ55_RS11715	COG1801	Protein of unknown function DUF72
CNQ55_RS11720	COG1335	isochorismatase
CNQ55_RS11730	COG0494	nUDIX hydrolase
CNQ55_RS11735	COG0217	transcriptional regulatory protein
CNQ55_RS11765	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CNQ55_RS11775	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
CNQ55_RS11780	COG0739	heme binding
CNQ55_RS11785	COG1560	Kdo2-lipid A biosynthetic process
CNQ55_RS11790	COG0469	pyruvate kinase activity
CNQ55_RS11795	COG1737	Transcriptional regulator
CNQ55_RS11800	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CNQ55_RS11805	COG0129	dihydroxy-acid dehydratase activity
CNQ55_RS11810	COG0800	Aldolase
CNQ55_RS11820	COG3141	response to X-ray
CNQ55_RS11830	COG2979	Protein of unknown function (DUF533)
CNQ55_RS11835	COG1770	oligopeptidase
CNQ55_RS11840	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CNQ55_RS11845	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CNQ55_RS11855	COG2372	response to copper ion
CNQ55_RS11860	COG1276	copper resistance
CNQ55_RS11870	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CNQ55_RS11890	COG3008	intermembrane lipid transfer
CNQ55_RS11895	COG2995	paraquat-inducible protein a
CNQ55_RS11900	COG1956	GAF domain-containing protein
CNQ55_RS11910	COG0793	Belongs to the peptidase S41A family
CNQ55_RS11920	COG2814	Major facilitator Superfamily
CNQ55_RS11925	COG1414	Transcriptional regulator
CNQ55_RS11960	COG2226	methyltransferase
CNQ55_RS11980	COG3716	PTS system mannose fructose sorbose family IID component
CNQ55_RS11985	COG3715	PTS system
CNQ55_RS11990	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ55_RS11990	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ55_RS12005	COG1253	flavin adenine dinucleotide binding
CNQ55_RS12010	COG2200	EAL domain
CNQ55_RS12015	COG1760	l-serine dehydratase
CNQ55_RS12025	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CNQ55_RS12040	COG0251	oxidation-reduction process
CNQ55_RS12045	COG1199	ATP-dependent helicase activity
CNQ55_RS12050	COG1214	PFAM Peptidase M22, glycoprotease
CNQ55_RS12055	COG3065	identical protein binding
CNQ55_RS12060	COG0318	PFAM AMP-dependent synthetase and ligase
CNQ55_RS12065	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
CNQ55_RS12070	COG0583	DNA-binding transcription factor activity
CNQ55_RS12080	COG3615	Tellurite resistance protein tehB
CNQ55_RS12090	COG2261	transglycosylase associated protein
CNQ55_RS12105	COG2199	diguanylate cyclase activity
CNQ55_RS12105	COG2203	Gaf domain
CNQ55_RS12110	COG3042	response to heat
CNQ55_RS12115	COG3189	MarR family transcriptional regulator
CNQ55_RS12120	COG2807	transmembrane transport
CNQ55_RS12125	COG2207	Transcriptional regulator
CNQ55_RS12140	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CNQ55_RS12145	COG2199	diguanylate cyclase activity
CNQ55_RS12150	COG2199	diguanylate cyclase activity
CNQ55_RS12160	COG2766	serine protein kinase
CNQ55_RS12165	COG3713	MltA-interacting MipA family protein
CNQ55_RS12170	COG0656	L-ascorbic acid biosynthetic process
CNQ55_RS12175	COG0676	glucose-6-phosphate 1-epimerase activity
CNQ55_RS12180	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CNQ55_RS12190	COG3139	Protein of unknown function (DUF1315)
CNQ55_RS12195	COG1063	alcohol dehydrogenase
CNQ55_RS12200	COG2271	Major facilitator Superfamily
CNQ55_RS12205	COG1063	alcohol dehydrogenase
CNQ55_RS12210	COG0191	fructose-bisphosphate aldolase activity
CNQ55_RS12215	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CNQ55_RS12220	COG0667	Aldo Keto reductase
CNQ55_RS12225	COG1349	DNA-binding transcription factor activity
CNQ55_RS12230	COG2814	Major facilitator Superfamily
CNQ55_RS12235	COG1335	isochorismatase
CNQ55_RS12240	COG0252	asparaginase activity
CNQ55_RS12245	COG0616	signal peptide processing
CNQ55_RS12255	COG0778	Nitroreductase
CNQ55_RS12265	COG0709	Synthesizes selenophosphate from selenide and ATP
CNQ55_RS12270	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CNQ55_RS12275	COG0443	Heat shock 70 kDa protein
CNQ55_RS12290	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CNQ55_RS12300	COG0494	nUDIX hydrolase
CNQ55_RS12305	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CNQ55_RS12310	COG2897	thiosulfate sulfurtransferase activity
CNQ55_RS12315	COG4136	ATPase activity
CNQ55_RS12320	COG4135	transport system, permease component
CNQ55_RS12325	COG4134	Bacterial extracellular solute-binding protein
CNQ55_RS12330	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CNQ55_RS12335	COG0398	Pfam SNARE associated Golgi protein
CNQ55_RS12345	COG0398	Pfam SNARE associated Golgi protein
CNQ55_RS12350	COG0708	Exodeoxyribonuclease III
CNQ55_RS12385	COG3678	ATP-independent chaperone mediated protein folding
CNQ55_RS12395	COG0322	excinuclease ABC activity
CNQ55_RS12405	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CNQ55_RS12415	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CNQ55_RS12420	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CNQ55_RS12425	COG1447	Phosphotransferase system cellobiose-specific component IIA
CNQ55_RS12430	COG2169	Transcriptional regulator
CNQ55_RS12430	COG1917	Cupin 2, conserved barrel domain protein
CNQ55_RS12435	COG1486	melibiose metabolic process
CNQ55_RS12445	COG0753	catalase activity
CNQ55_RS12455	COG1823	symporter activity
CNQ55_RS12460	COG1988	membrane-bound metal-dependent
CNQ55_RS12465	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CNQ55_RS12475	COG3001	Fructosamine kinase
CNQ55_RS12485	COG1105	Belongs to the carbohydrate kinase PfkB family
CNQ55_RS12490	COG3137	Salt-induced outer membrane protein
CNQ55_RS12550	COG0386	Belongs to the glutathione peroxidase family
CNQ55_RS12560	COG0791	NLP P60 protein
CNQ55_RS12565	COG2200	EAL domain
CNQ55_RS12575	COG4256	Hemin uptake protein
CNQ55_RS12580	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CNQ55_RS12595	COG0574	Belongs to the PEP-utilizing enzyme family
CNQ55_RS12595	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CNQ55_RS12600	COG0318	PFAM AMP-dependent synthetase and ligase
CNQ55_RS12605	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
CNQ55_RS12610	COG0644	oxidoreductase
CNQ55_RS12615	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CNQ55_RS12620	COG2086	electron transfer activity
CNQ55_RS12630	COG2207	Transcriptional regulator
CNQ55_RS12630	COG1917	Cupin 2, conserved barrel domain protein
CNQ55_RS12635	COG1960	acyl-CoA dehydrogenase activity
CNQ55_RS12640	COG4670	ketone body catabolic process
CNQ55_RS12655	COG2271	Major facilitator Superfamily
CNQ55_RS12660	COG0738	Major facilitator superfamily
CNQ55_RS12675	COG0628	permease
CNQ55_RS12680	COG0277	FAD linked oxidase domain protein
CNQ55_RS12680	COG0247	lactate metabolic process
CNQ55_RS12685	COG2050	protein possibly involved in aromatic compounds catabolism
CNQ55_RS12695	COG0316	Belongs to the HesB IscA family
CNQ55_RS12700	COG0719	Fe-S assembly protein
CNQ55_RS12705	COG0396	ATPase activity
CNQ55_RS12710	COG0719	Fe-S assembly protein
CNQ55_RS12725	COG1376	ErfK ybiS ycfS ynhG family protein
CNQ55_RS12730	COG4238	major outer membrane lipoprotein
CNQ55_RS12735	COG0469	pyruvate kinase activity
CNQ55_RS12745	COG0437	4 iron, 4 sulfur cluster binding
CNQ55_RS12750	COG2414	aldehyde ferredoxin oxidoreductase
CNQ55_RS12760	COG0437	4 iron, 4 sulfur cluster binding
CNQ55_RS12765	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
CNQ55_RS12775	COG4529	Protein conserved in bacteria
CNQ55_RS12795	COG3468	outer membrane autotransporter barrel domain protein
CNQ55_RS12805	COG0307	riboflavin synthase, alpha
CNQ55_RS12810	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CNQ55_RS12815	COG2814	Major facilitator Superfamily
CNQ55_RS12820	COG0583	DNA-binding transcription factor activity
CNQ55_RS12840	COG2814	Major facilitator Superfamily
CNQ55_RS12845	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CNQ55_RS12850	COG0791	NLP P60 protein
CNQ55_RS12855	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CNQ55_RS12875	COG0346	lactoylglutathione lyase activity
CNQ55_RS12880	COG1902	pentaerythritol trinitrate reductase activity
CNQ55_RS12885	COG1309	transcriptional regulator
CNQ55_RS12890	COG3313	Fe-S protein
CNQ55_RS12895	COG4989	oxidoreductase activity
CNQ55_RS12900	COG2032	superoxide dismutase activity
CNQ55_RS12905	COG1289	transmembrane transporter activity
CNQ55_RS12910	COG1566	PFAM secretion protein HlyD family protein
CNQ55_RS12925	COG3133	Outer membrane lipoprotein
CNQ55_RS12935	COG3895	Periplasmic Protein
CNQ55_RS12955	COG0625	glutathione transferase activity
CNQ55_RS12960	COG3104	oligopeptide transport
CNQ55_RS12970	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CNQ55_RS12980	COG4659	FMN binding
CNQ55_RS13025	COG0673	inositol 2-dehydrogenase activity
CNQ55_RS13035	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CNQ55_RS13040	COG1263	PTS System
CNQ55_RS13040	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ55_RS13045	COG1609	Transcriptional regulator
CNQ55_RS13050	COG1028	Short-chain dehydrogenase reductase Sdr
CNQ55_RS13055	COG1309	transcriptional regulator
CNQ55_RS13060	COG3250	beta-galactosidase activity
CNQ55_RS13075	COG5339	Protein conserved in bacteria
CNQ55_RS13080	COG1482	cell wall glycoprotein biosynthetic process
CNQ55_RS13085	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CNQ55_RS13085	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CNQ55_RS13090	COG0114	fumarate hydratase activity
CNQ55_RS13100	COG2205	protein histidine kinase activity
CNQ55_RS13105	COG0745	RESPONSE REGULATOR receiver
CNQ55_RS13110	COG3136	membrane protein required for alginate biosynthesis
CNQ55_RS13120	COG0531	amino acid
CNQ55_RS13135	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CNQ55_RS13140	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CNQ55_RS13145	COG0628	permease
CNQ55_RS13165	COG3591	Belongs to the peptidase S1B family
CNQ55_RS13185	COG2814	Major facilitator Superfamily
CNQ55_RS13190	COG0583	DNA-binding transcription factor activity
CNQ55_RS13195	COG1940	carbohydrate kinase activity
CNQ55_RS13200	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CNQ55_RS13210	COG3381	protein complex oligomerization
CNQ55_RS13215	COG3302	dmso reductase anchor subunit
CNQ55_RS13230	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CNQ55_RS13250	COG4948	Mandelate Racemase Muconate Lactonizing
CNQ55_RS13255	COG1063	alcohol dehydrogenase
CNQ55_RS13260	COG0477	Major facilitator Superfamily
CNQ55_RS13265	COG0246	Mannitol dehydrogenase
CNQ55_RS13275	COG1802	Transcriptional regulator
CNQ55_RS13280	COG4221	oxidoreductase activity
CNQ55_RS13290	COG0339	signal peptide processing
CNQ55_RS13300	COG3111	PFAM Bacterial OB fold (BOF) protein
CNQ55_RS13305	COG3706	GGDEF domain
CNQ55_RS13315	COG2814	Major facilitator Superfamily
CNQ55_RS13320	COG0697	spore germination
CNQ55_RS13325	COG2188	Transcriptional regulator
CNQ55_RS13335	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CNQ55_RS13340	COG1447	Phosphotransferase system cellobiose-specific component IIA
CNQ55_RS13350	COG2723	6-phospho-beta-galactosidase activity
CNQ55_RS13360	COG4977	sequence-specific DNA binding
CNQ55_RS13365	COG1846	Transcriptional regulator
CNQ55_RS13385	COG0583	DNA-binding transcription factor activity
CNQ55_RS13390	COG1012	belongs to the aldehyde dehydrogenase family
CNQ55_RS13395	COG2066	Belongs to the glutaminase family
CNQ55_RS13410	COG2199	diguanylate cyclase activity
CNQ55_RS13430	COG3781	membrane
CNQ55_RS13440	COG1396	sequence-specific DNA binding
CNQ55_RS13445	COG3550	peptidyl-serine autophosphorylation
CNQ55_RS13455	COG3188	usher protein
CNQ55_RS13460	COG3539	Fimbrial protein
CNQ55_RS13465	COG3539	Fimbrial protein
CNQ55_RS13470	COG3539	Fimbrial protein
CNQ55_RS13475	COG0243	molybdopterin cofactor binding
CNQ55_RS13490	COG3119	arylsulfatase activity
CNQ55_RS13495	COG0641	radical SAM
CNQ55_RS13500	COG4178	(ABC) transporter
CNQ55_RS13505	COG4771	TonB-dependent receptor
CNQ55_RS13510	COG0612	Peptidase, M16
CNQ55_RS13520	COG0076	glutamate decarboxylase activity
CNQ55_RS13525	COG0531	amino acid
CNQ55_RS13530	COG1649	PFAM Uncharacterised BCR, COG1649
CNQ55_RS13535	COG3706	GGDEF domain
CNQ55_RS13535	COG3706	GGDEF domain
CNQ55_RS13540	COG2199	diguanylate cyclase activity
CNQ55_RS13540	COG2202	Pas domain
CNQ55_RS13540	COG2200	EAL domain
CNQ55_RS13545	COG1764	response to oxidative stress
CNQ55_RS13570	COG1064	alcohol dehydrogenase
CNQ55_RS13580	COG3093	addiction module antidote protein HigA
CNQ55_RS13585	COG2864	formate dehydrogenase
CNQ55_RS13590	COG0437	4 iron, 4 sulfur cluster binding
CNQ55_RS13600	COG0697	spore germination
CNQ55_RS13605	COG2223	nitrite transmembrane transporter activity
CNQ55_RS13610	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CNQ55_RS13615	COG1140	nitrate reductase beta subunit
CNQ55_RS13620	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CNQ55_RS13625	COG2181	nitrate reductase activity
CNQ55_RS13630	COG0384	phenazine biosynthesis protein PhzF
CNQ55_RS13635	COG2162	N-hydroxyarylamine O-acetyltransferase activity
CNQ55_RS13640	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CNQ55_RS13655	COG5433	transposase activity
CNQ55_RS13675	COG3501	Rhs element vgr protein
CNQ55_RS13685	COG0625	glutathione transferase activity
CNQ55_RS13690	COG1113	amino acid transport
CNQ55_RS13710	COG4772	TonB-dependent receptor
CNQ55_RS13715	COG1802	Transcriptional regulator
CNQ55_RS13730	COG1247	-acetyltransferase
CNQ55_RS13735	COG3238	Protein conserved in bacteria
CNQ55_RS13765	COG1177	transmembrane transport
CNQ55_RS13770	COG1176	ABC-type spermidine putrescine transport system, permease component I
CNQ55_RS13775	COG3842	ATPase activity
CNQ55_RS13780	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CNQ55_RS13785	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CNQ55_RS13800	COG0826	peptidase U32
CNQ55_RS13805	COG1396	sequence-specific DNA binding
CNQ55_RS13810	COG3135	benzoate transporter
CNQ55_RS13820	COG0500	methyltransferase
CNQ55_RS13825	COG1275	C4-dicarboxylate transporter malic acid transport protein
CNQ55_RS13830	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CNQ55_RS13835	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CNQ55_RS13840	COG2841	Protein conserved in bacteria
CNQ55_RS13860	COG5383	Protein conserved in bacteria
CNQ55_RS13865	COG0583	DNA-binding transcription factor activity
CNQ55_RS13885	COG3038	cytochrome b561
CNQ55_RS13890	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CNQ55_RS13895	COG1012	belongs to the aldehyde dehydrogenase family
CNQ55_RS13900	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CNQ55_RS13905	COG1643	Atp-dependent helicase
CNQ55_RS13920	COG2267	carboxylic ester hydrolase activity
CNQ55_RS13925	COG4589	Belongs to the CDS family
CNQ55_RS13930	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CNQ55_RS13935	COG0667	Aldo Keto reductase
CNQ55_RS13945	COG3784	Protein of unknown function (DUF1318)
CNQ55_RS13955	COG2911	Protein conserved in bacteria
CNQ55_RS13960	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CNQ55_RS13965	COG3187	Heat shock protein
CNQ55_RS13970	COG3042	response to heat
CNQ55_RS13975	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CNQ55_RS13975	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CNQ55_RS13975	COG1013	pyruvate-flavodoxin oxidoreductase activity
CNQ55_RS13975	COG0674	pyruvate-flavodoxin oxidoreductase activity
CNQ55_RS13980	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CNQ55_RS13985	COG0589	response to stress
CNQ55_RS13990	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CNQ55_RS14005	COG0582	viral genome integration into host DNA
CNQ55_RS14015	COG0513	Belongs to the DEAD box helicase family
CNQ55_RS14030	COG3706	GGDEF domain
CNQ55_RS14035	COG2840	Smr protein MutS2
CNQ55_RS14050	COG2207	Transcriptional regulator
CNQ55_RS14060	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
CNQ55_RS14065	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CNQ55_RS14070	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CNQ55_RS14075	COG0589	response to stress
CNQ55_RS14080	COG3182	Iron-regulated membrane protein
CNQ55_RS14085	COG0668	transmembrane transport
CNQ55_RS14090	COG4166	transmembrane transport
CNQ55_RS14095	COG0583	DNA-binding transcription factor activity
CNQ55_RS14100	COG1073	alpha beta
CNQ55_RS14105	COG0702	epimerase
CNQ55_RS14110	COG2866	Carboxypeptidase
CNQ55_RS14115	COG4948	Mandelate Racemase Muconate Lactonizing
CNQ55_RS14120	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CNQ55_RS14125	COG3283	Transcriptional regulator of aromatic amino acids metabolism
CNQ55_RS14135	COG3106	COG3106 Predicted ATPase
CNQ55_RS14140	COG1609	Transcriptional regulator
CNQ55_RS14155	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CNQ55_RS14160	COG1554	hydrolase, family 65, central catalytic
CNQ55_RS14165	COG0673	inositol 2-dehydrogenase activity
CNQ55_RS14170	COG1082	Xylose isomerase domain protein TIM barrel
CNQ55_RS14175	COG1063	alcohol dehydrogenase
CNQ55_RS14180	COG0395	ABC-type sugar transport system, permease component
CNQ55_RS14185	COG1175	transmembrane transport
CNQ55_RS14190	COG1653	transport
CNQ55_RS14195	COG0366	Alpha amylase catalytic
CNQ55_RS14200	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CNQ55_RS14210	COG1983	PspC domain protein
CNQ55_RS14220	COG1842	Phage shock protein A
CNQ55_RS14225	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CNQ55_RS14240	COG4166	transmembrane transport
CNQ55_RS14245	COG4168	peptide transport system, permease
CNQ55_RS14250	COG4171	peptide transport system, permease
CNQ55_RS14255	COG4172	Belongs to the ABC transporter superfamily
CNQ55_RS14260	COG4172	Belongs to the ABC transporter superfamily
CNQ55_RS14265	COG2814	Major facilitator Superfamily
CNQ55_RS14280	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CNQ55_RS14290	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CNQ55_RS14295	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CNQ55_RS14295	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CNQ55_RS14310	COG5001	Diguanylate cyclase
CNQ55_RS14320	COG1349	DNA-binding transcription factor activity
CNQ55_RS14330	COG0023	Translation Initiation Factor
CNQ55_RS14340	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CNQ55_RS14345	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
CNQ55_RS14350	COG0671	phosphoesterase, PA-phosphatase related
CNQ55_RS14360	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CNQ55_RS14380	COG0583	DNA-binding transcription factor activity
CNQ55_RS14390	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CNQ55_RS14405	COG0616	signal peptide processing
CNQ55_RS14410	COG1028	Short-chain dehydrogenase reductase Sdr
CNQ55_RS14415	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
CNQ55_RS14430	COG1187	pseudouridine synthase activity
CNQ55_RS14435	COG4907	membrane protein (DUF2207)
CNQ55_RS14440	COG0009	L-threonylcarbamoyladenylate synthase
CNQ55_RS14445	COG0613	PHP domain protein
CNQ55_RS14455	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CNQ55_RS14460	COG0512	Glutamine amidotransferase of anthranilate synthase
CNQ55_RS14460	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CNQ55_RS14480	COG3729	General stress protein
CNQ55_RS14485	COG3685	Protein conserved in bacteria
CNQ55_RS14490	COG3685	Protein conserved in bacteria
CNQ55_RS14495	COG3047	cAMP biosynthetic process
CNQ55_RS14515	COG1607	acyl-coa hydrolase
CNQ55_RS14525	COG2350	Protein conserved in bacteria
CNQ55_RS14530	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CNQ55_RS14550	COG4608	Belongs to the ABC transporter superfamily
CNQ55_RS14555	COG0444	Belongs to the ABC transporter superfamily
CNQ55_RS14560	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CNQ55_RS14565	COG0601	transmembrane transport
CNQ55_RS14570	COG4166	transmembrane transport
CNQ55_RS14580	COG2095	MarC family integral membrane protein
CNQ55_RS14585	COG1454	alcohol dehydrogenase
CNQ55_RS14585	COG1012	belongs to the aldehyde dehydrogenase family
CNQ55_RS14595	COG1435	thymidine kinase activity
CNQ55_RS14605	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CNQ55_RS14610	COG0745	RESPONSE REGULATOR receiver
CNQ55_RS14615	COG1752	Esterase of the alpha-beta hydrolase superfamily
CNQ55_RS14625	COG0788	formyltetrahydrofolate deformylase activity
CNQ55_RS14645	COG2181	nitrate reductase activity
CNQ55_RS14650	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CNQ55_RS14655	COG1140	nitrate reductase beta subunit
CNQ55_RS14660	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CNQ55_RS14665	COG2223	nitrite transmembrane transporter activity
CNQ55_RS14675	COG3850	Histidine kinase
CNQ55_RS14680	COG2197	response regulator
CNQ55_RS14685	COG4932	domain protein
CNQ55_RS14690	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
CNQ55_RS14695	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
CNQ55_RS14700	COG4572	Cation transport regulator
CNQ55_RS14705	COG0387	Pfam Sodium calcium exchanger
CNQ55_RS14725	COG2912	Transglutaminase-like superfamily
CNQ55_RS14730	COG3094	Invasion gene expression up-regulator, SirB
CNQ55_RS14735	COG2890	protein-(glutamine-N5) methyltransferase activity
CNQ55_RS14760	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CNQ55_RS14765	COG0659	secondary active sulfate transmembrane transporter activity
CNQ55_RS14780	COG0012	GTP binding
CNQ55_RS14790	COG3284	Transcriptional regulator
CNQ55_RS14795	COG2376	Dihydroxyacetone kinase
CNQ55_RS14800	COG1461	Dihydroxyacetone kinase
CNQ55_RS14805	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ55_RS14805	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
CNQ55_RS14805	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CNQ55_RS14820	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CNQ55_RS14825	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CNQ55_RS14830	COG1120	ATPase activity
CNQ55_RS14835	COG0500	methyltransferase
CNQ55_RS14840	COG0157	Belongs to the NadC ModD family
CNQ55_RS14855	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
CNQ55_RS14870	COG1619	proteins homologs of microcin C7 resistance protein MccF
CNQ55_RS14880	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CNQ55_RS14890	COG2719	SpoVR family
CNQ55_RS14910	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CNQ55_RS14915	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CNQ55_RS14930	COG0179	Fumarylacetoacetate (FAA) hydrolase
CNQ55_RS14965	COG2894	cell division
CNQ55_RS15060	COG2200	EAL domain
CNQ55_RS15065	COG0789	Transcriptional regulator
CNQ55_RS15070	COG5562	phage envelope protein
CNQ55_RS15075	COG0538	isocitrate dehydrogenase activity
CNQ55_RS15085	COG0456	acetyltransferase
CNQ55_RS15105	COG1121	(ABC) transporter
CNQ55_RS15110	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CNQ55_RS15115	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CNQ55_RS15130	COG5301	cellulose 1,4-beta-cellobiosidase activity
CNQ55_RS15160	COG1196	nuclear chromosome segregation
CNQ55_RS15210	COG1030	water channel activity
CNQ55_RS15230	COG4220	transposase activity
CNQ55_RS15265	COG3772	lysozyme
CNQ55_RS15410	COG0582	viral genome integration into host DNA
CNQ55_RS15415	COG0538	isocitrate dehydrogenase activity
CNQ55_RS15420	COG1187	pseudouridine synthase activity
CNQ55_RS15440	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CNQ55_RS15450	COG2205	protein histidine kinase activity
CNQ55_RS15455	COG2850	peptidyl-arginine hydroxylation
CNQ55_RS15470	COG3842	ATPase activity
CNQ55_RS15495	COG5301	cellulose 1,4-beta-cellobiosidase activity
CNQ55_RS15535	COG1196	nuclear chromosome segregation
CNQ55_RS15605	COG4220	transposase activity
CNQ55_RS15630	COG3772	lysozyme
CNQ55_RS15690	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
CNQ55_RS15695	COG1403	HNH endonuclease
CNQ55_RS15755	COG4197	protein conserved in bacteria, prophage-related
CNQ55_RS15795	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CNQ55_RS15805	COG0582	viral genome integration into host DNA
CNQ55_RS15810	COG1177	transmembrane transport
CNQ55_RS15815	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CNQ55_RS15825	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
CNQ55_RS15830	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CNQ55_RS15840	COG4591	ABC-type transport system involved in lipoprotein release permease component
CNQ55_RS15850	COG4591	ABC-type transport system involved in lipoprotein release permease component
CNQ55_RS15855	COG4763	Acyl-transferase
CNQ55_RS15860	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CNQ55_RS15865	COG1376	ErfK ybiS ycfS ynhG family protein
CNQ55_RS15865	COG1388	LysM domain
CNQ55_RS15875	COG1309	transcriptional regulator
CNQ55_RS15880	COG3134	Outer membrane lipoprotein
CNQ55_RS15890	COG1252	NADH dehydrogenase
CNQ55_RS15910	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
CNQ55_RS15915	COG5633	Lipoprotein
CNQ55_RS15920	COG0537	adenosine 5'-monophosphoramidase activity
CNQ55_RS15925	COG4773	Receptor
CNQ55_RS15930	COG1263	PTS System
CNQ55_RS15930	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ55_RS15935	COG0084	hydrolase, TatD family'
CNQ55_RS15940	COG0470	DNA polymerase III
CNQ55_RS15950	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CNQ55_RS15955	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CNQ55_RS15960	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CNQ55_RS15970	COG1028	Short-chain dehydrogenase reductase Sdr
CNQ55_RS15975	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CNQ55_RS15995	COG1399	metal-binding, possibly nucleic acid-binding protein
CNQ55_RS16000	COG0424	maF-like protein
CNQ55_RS16005	COG0564	pseudouridine synthase activity
CNQ55_RS16015	COG1530	ribonuclease E activity
CNQ55_RS16020	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CNQ55_RS16025	COG1256	bacterial-type flagellum assembly
CNQ55_RS16030	COG1705	Flagellar rod assembly protein muramidase FlgJ
CNQ55_RS16030	COG3951	Flagellar rod assembly protein muramidase FlgJ
CNQ55_RS16045	COG4786	Flagellar basal body rod
CNQ55_RS16050	COG4787	bacterial-type flagellum-dependent cell motility
CNQ55_RS16055	COG1749	Flagellar hook protein flgE
CNQ55_RS16060	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
CNQ55_RS16065	COG1558	bacterial-type flagellum-dependent cell motility
CNQ55_RS16070	COG1815	bacterial-type flagellum-dependent cell motility
CNQ55_RS16075	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
CNQ55_RS16080	COG2747	anti-sigma28 factor FlgM
CNQ55_RS16085	COG3418	PFAM FlgN family protein
CNQ55_RS16090	COG0728	peptidoglycan biosynthetic process
CNQ55_RS16095	COG0673	inositol 2-dehydrogenase activity
CNQ55_RS16105	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CNQ55_RS16115	COG2999	glutathione oxidoreductase activity
CNQ55_RS16150	COG3038	cytochrome b561
CNQ55_RS16155	COG2353	YceI-like domain
CNQ55_RS16165	COG1560	Kdo2-lipid A biosynthetic process
CNQ55_RS16180	COG5645	(Lipo)protein
CNQ55_RS16210	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CNQ55_RS16215	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
CNQ55_RS16250	COG2197	response regulator
CNQ55_RS16265	COG1462	curli production assembly transport component CsgG
CNQ55_RS16275	COG3381	protein complex oligomerization
CNQ55_RS16295	COG3706	GGDEF domain
CNQ55_RS16300	COG0457	Tetratricopeptide repeat
CNQ55_RS16305	COG0726	polysaccharide deacetylase
CNQ55_RS16305	COG1649	PFAM Uncharacterised BCR, COG1649
CNQ55_RS16310	COG1215	transferase activity, transferring glycosyl groups
CNQ55_RS16315	COG3658	cytochrome
CNQ55_RS16320	COG1702	phosphate starvation-inducible protein PhoH
CNQ55_RS16345	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CNQ55_RS16360	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CNQ55_RS16360	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CNQ55_RS16360	COG0506	proline dehydrogenase activity
CNQ55_RS16365	COG1309	transcriptional regulator
CNQ55_RS16400	COG2233	PERMEase
CNQ55_RS16405	COG3729	General stress protein
CNQ55_RS16445	COG0243	molybdopterin cofactor binding
CNQ55_RS16450	COG3005	denitrification pathway
CNQ55_RS16455	COG0745	RESPONSE REGULATOR receiver
CNQ55_RS16460	COG1879	ABC-type sugar transport system periplasmic component
CNQ55_RS16490	COG1278	Cold shock
CNQ55_RS16495	COG1278	Cold shock
CNQ55_RS16510	COG1294	oxidase, subunit
CNQ55_RS16515	COG1271	oxidase subunit
CNQ55_RS16520	COG1773	rubredoxin
CNQ55_RS16525	COG1999	signal sequence binding
CNQ55_RS16530	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
CNQ55_RS16535	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
CNQ55_RS16540	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
CNQ55_RS16545	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
CNQ55_RS16555	COG0670	Belongs to the BI1 family
CNQ55_RS16560	COG2920	part of a sulfur-relay system
CNQ55_RS16565	COG1254	Belongs to the acylphosphatase family
CNQ55_RS16580	COG1832	CoA-binding protein
CNQ55_RS16595	COG0210	DNA helicase
CNQ55_RS16600	COG3304	Inner membrane component domain
CNQ55_RS16605	COG1289	transmembrane transporter activity
CNQ55_RS16610	COG3070	regulator of competence-specific genes
CNQ55_RS16625	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
CNQ55_RS16625	COG2885	chlorophyll binding
CNQ55_RS16635	COG1067	ATP-dependent peptidase activity
CNQ55_RS16645	COG3130	regulation of translation
CNQ55_RS16650	COG3009	Protein conserved in bacteria
CNQ55_RS16655	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CNQ55_RS16655	COG3008	intermembrane lipid transfer
CNQ55_RS16660	COG2995	paraquat-inducible protein a
CNQ55_RS16665	COG0488	(ABC) transporter
CNQ55_RS16675	COG3217	Mosc domain protein beta barrel domain protein
CNQ55_RS16675	COG0633	Ferredoxin
CNQ55_RS16695	COG0431	NADPH-dependent FMN reductase
CNQ55_RS16700	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CNQ55_RS16710	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CNQ55_RS16720	COG0308	aminopeptidase N
CNQ55_RS16745	COG1448	Aminotransferase
CNQ55_RS16750	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CNQ55_RS16755	COG3108	Peptidase M15
CNQ55_RS16765	COG2989	Protein conserved in bacteria
CNQ55_RS16775	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
CNQ55_RS16785	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CNQ55_RS16790	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CNQ55_RS16795	COG3173	Aminoglycoside phosphotransferase
CNQ55_RS16810	COG3214	Protein conserved in bacteria
CNQ55_RS16825	COG2333	competence protein COMEC
CNQ55_RS16825	COG0658	competence protein
CNQ55_RS16835	COG0539	negative regulation of cytoplasmic translation
CNQ55_RS16845	COG0501	Belongs to the peptidase M48B family
CNQ55_RS16860	COG2323	membrane
CNQ55_RS16865	COG1944	ATP diphosphatase activity
CNQ55_RS16870	COG2116	formate transmembrane transporter activity
CNQ55_RS16875	COG1882	Formate acetyltransferase
CNQ55_RS16880	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CNQ55_RS16890	COG1335	isochorismatase
CNQ55_RS16895	COG3302	dmso reductase anchor subunit
CNQ55_RS16900	COG0437	4 iron, 4 sulfur cluster binding
CNQ55_RS16905	COG0243	molybdopterin cofactor binding
CNQ55_RS16915	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CNQ55_RS16925	COG1674	ftsk spoiiie
CNQ55_RS16925	COG1178	ABC-type Fe3 transport system permease component
CNQ55_RS16930	COG1522	sequence-specific DNA binding
CNQ55_RS16940	COG0492	ferredoxin-NADP+ reductase activity
CNQ55_RS16945	COG4988	ABC transporter
CNQ55_RS16950	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CNQ55_RS16975	COG0542	response to heat
CNQ55_RS16985	COG1278	Cold shock
CNQ55_RS16995	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CNQ55_RS17000	COG2990	Protein conserved in bacteria
CNQ55_RS17005	COG3593	DNA synthesis involved in DNA repair
CNQ55_RS17020	COG2431	L-lysine efflux transmembrane transporter activity
CNQ55_RS17030	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CNQ55_RS17035	COG0028	Belongs to the TPP enzyme family
CNQ55_RS17040	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
CNQ55_RS17045	COG0702	epimerase
CNQ55_RS17050	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CNQ55_RS17055	COG3023	N-Acetylmuramoyl-L-alanine amidase
CNQ55_RS17070	COG1126	abc transporter atp-binding protein
CNQ55_RS17075	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CNQ55_RS17080	COG4215	(ABC) transporter
CNQ55_RS17085	COG4160	amino acid transport
CNQ55_RS17090	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CNQ55_RS17105	COG1177	transmembrane transport
CNQ55_RS17110	COG1176	ABC-type spermidine putrescine transport system, permease component I
CNQ55_RS17115	COG3842	ATPase activity
CNQ55_RS17120	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CNQ55_RS17140	COG0778	Nitroreductase
CNQ55_RS17150	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CNQ55_RS17165	COG3226	Transcriptional regulator
CNQ55_RS17170	COG0738	Major facilitator superfamily
CNQ55_RS17175	COG0561	phosphatase activity
CNQ55_RS17185	COG2814	Major facilitator Superfamily
CNQ55_RS17190	COG0671	phosphoesterase, PA-phosphatase related
CNQ55_RS17195	COG1349	DNA-binding transcription factor activity
CNQ55_RS17200	COG1686	Belongs to the peptidase S11 family
CNQ55_RS17205	COG0625	glutathione transferase activity
CNQ55_RS17210	COG2133	pyrroloquinoline quinone binding
CNQ55_RS17225	COG2199	diguanylate cyclase activity
CNQ55_RS17230	COG2200	EAL domain
CNQ55_RS17255	COG1446	asparaginase
CNQ55_RS17260	COG0303	'Molybdopterin
CNQ55_RS17265	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CNQ55_RS17270	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CNQ55_RS17275	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CNQ55_RS17280	COG1882	Formate acetyltransferase
CNQ55_RS17285	COG0561	phosphatase activity
CNQ55_RS17290	COG0488	(ABC) transporter
CNQ55_RS17295	COG1376	ErfK ybiS ycfS ynhG family protein
CNQ55_RS17300	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CNQ55_RS17305	COG1321	iron dependent repressor
CNQ55_RS17320	COG2194	sulfuric ester hydrolase activity
CNQ55_RS17325	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
CNQ55_RS17330	COG5006	permease, DMT superfamily
CNQ55_RS17350	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CNQ55_RS17355	COG0765	amino acid transport
CNQ55_RS17360	COG1126	abc transporter atp-binding protein
CNQ55_RS17365	COG0668	transmembrane transport
CNQ55_RS17385	COG3128	pkhd-type hydroxylase
CNQ55_RS17390	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CNQ55_RS17400	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CNQ55_RS17405	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CNQ55_RS17410	COG1199	ATP-dependent helicase activity
CNQ55_RS17420	COG0513	Belongs to the DEAD box helicase family
CNQ55_RS17425	COG1309	transcriptional regulator
CNQ55_RS17435	COG1131	(ABC) transporter
CNQ55_RS17440	COG0842	Transport permease protein
CNQ55_RS17445	COG0842	Transport permease protein
CNQ55_RS17455	COG3568	Endonuclease Exonuclease Phosphatase
CNQ55_RS17460	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CNQ55_RS17465	COG0392	lysyltransferase activity
CNQ55_RS17470	COG0670	Belongs to the BI1 family
CNQ55_RS17475	COG0670	Belongs to the BI1 family
CNQ55_RS17480	COG0314	molybdopterin synthase activity
CNQ55_RS17485	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CNQ55_RS17495	COG0521	Mo-molybdopterin cofactor biosynthetic process
CNQ55_RS17505	COG0391	Required for morphogenesis under gluconeogenic growth conditions
CNQ55_RS17515	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CNQ55_RS17520	COG2226	methyltransferase
CNQ55_RS17535	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CNQ55_RS17545	COG1881	PFAM PEBP family protein
CNQ55_RS17620	COG1783	phage Terminase large subunit
CNQ55_RS17645	COG3772	lysozyme
CNQ55_RS17720	COG0305	Participates in initiation and elongation during chromosome replication
CNQ55_RS17780	COG3723	Recombinational DNA repair protein, rece pathway
CNQ55_RS17860	COG0582	viral genome integration into host DNA
CNQ55_RS17865	COG4677	pectinesterase activity
CNQ55_RS17870	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CNQ55_RS17875	COG0471	metal ion transport
CNQ55_RS17880	COG2828	Protein conserved in bacteria
CNQ55_RS17885	COG0583	DNA-binding transcription factor activity
CNQ55_RS17895	COG0561	phosphatase activity
CNQ55_RS17905	COG4149	molybdate abc transporter
CNQ55_RS17910	COG0725	ABC transporter, periplasmic molybdate-binding protein
CNQ55_RS17925	COG3585	molybdate ion transport
CNQ55_RS17925	COG2005	Transcriptional regulator
CNQ55_RS17935	COG1119	ATPase activity
CNQ55_RS17940	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CNQ55_RS17945	COG1085	galactose-1-phosphate uridylyltransferase
CNQ55_RS17955	COG2017	converts alpha-aldose to the beta-anomer
CNQ55_RS17965	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CNQ55_RS17980	COG1230	cation diffusion facilitator family transporter
CNQ55_RS17985	COG3201	nicotinamide mononucleotide transporter
CNQ55_RS18030	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
CNQ55_RS18035	COG2885	chlorophyll binding
CNQ55_RS18045	COG3064	Membrane
CNQ55_RS18050	COG0848	biopolymer transport protein
CNQ55_RS18055	COG0811	peptide transport
CNQ55_RS18060	COG0824	Thioesterase
CNQ55_RS18065	COG3790	cyd operon protein YbgE
CNQ55_RS18070	COG4890	Cyd operon protein YbgT
CNQ55_RS18075	COG1294	oxidase, subunit
CNQ55_RS18080	COG1271	oxidase subunit
CNQ55_RS18095	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CNQ55_RS18105	COG0508	dehydrogenase complex catalyzes the overall conversion of
CNQ55_RS18110	COG0567	Dehydrogenase, E1 component
CNQ55_RS18115	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CNQ55_RS18120	COG1053	succinate dehydrogenase
CNQ55_RS18125	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
CNQ55_RS18130	COG2009	succinate dehydrogenase
CNQ55_RS18145	COG0372	Belongs to the citrate synthase family
CNQ55_RS18155	COG3180	Ammonia monooxygenase
CNQ55_RS18170	COG1984	allophanate hydrolase subunit 2
CNQ55_RS18175	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CNQ55_RS18180	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CNQ55_RS18190	COG0415	Belongs to the DNA photolyase family
CNQ55_RS18195	COG3272	Protein of unknown function (DUF1722)
CNQ55_RS18225	COG2205	protein histidine kinase activity
CNQ55_RS18230	COG0745	RESPONSE REGULATOR receiver
CNQ55_RS18240	COG1982	Orn Lys Arg decarboxylase major
CNQ55_RS18245	COG0531	amino acid
CNQ55_RS18250	COG0033	Phosphoglucomutase
CNQ55_RS18255	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
CNQ55_RS18260	COG0596	Alpha beta hydrolase
CNQ55_RS18270	COG0716	FMN binding
CNQ55_RS18280	COG0735	belongs to the Fur family
CNQ55_RS18300	COG1349	DNA-binding transcription factor activity
CNQ55_RS18305	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CNQ55_RS18310	COG3395	kinase activity
CNQ55_RS18315	COG1454	alcohol dehydrogenase
CNQ55_RS18320	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CNQ55_RS18325	COG0861	Integral membrane protein TerC family
CNQ55_RS18345	COG1263	PTS System
CNQ55_RS18345	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ55_RS18345	COG2190	(PTS) system
CNQ55_RS18355	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CNQ55_RS18360	COG1846	Transcriptional regulator
CNQ55_RS18360	COG1940	carbohydrate kinase activity
CNQ55_RS18365	COG0647	UMP catabolic process
CNQ55_RS18375	COG0367	asparagine synthase
CNQ55_RS18420	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CNQ55_RS18430	COG1702	phosphate starvation-inducible protein PhoH
CNQ55_RS18440	COG4535	Mg2 and Co2 transporter CorC
CNQ55_RS18445	COG0815	Transfers the fatty acyl group on membrane lipoproteins
CNQ55_RS18455	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CNQ55_RS18460	COG0765	amino acid transport
CNQ55_RS18465	COG0765	amino acid transport
CNQ55_RS18470	COG1126	abc transporter atp-binding protein
CNQ55_RS18480	COG2888	peptidyl-tyrosine sulfation
CNQ55_RS18495	COG1466	dna polymerase III delta subunit
CNQ55_RS18505	COG0406	alpha-ribazole phosphatase activity
CNQ55_RS18510	COG0799	negative regulation of ribosome biogenesis
CNQ55_RS18520	COG0768	penicillin binding
CNQ55_RS18525	COG0772	Belongs to the SEDS family
CNQ55_RS18530	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CNQ55_RS18535	COG1686	Belongs to the peptidase S11 family
CNQ55_RS18555	COG0583	DNA-binding transcription factor activity
CNQ55_RS18570	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CNQ55_RS18575	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CNQ55_RS18600	COG3069	C4-dicarboxylate transmembrane transporter activity
CNQ55_RS18605	COG4565	transcriptional regulatory protein
CNQ55_RS18610	COG3290	protein histidine kinase activity
CNQ55_RS18615	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
CNQ55_RS18625	COG2301	Belongs to the HpcH HpaI aldolase family
CNQ55_RS18630	COG3051	citrate lyase alpha subunit
CNQ55_RS18645	COG0471	metal ion transport
CNQ55_RS18650	COG3719	Belongs to the RNase T2 family
CNQ55_RS18660	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CNQ55_RS18665	COG0589	response to stress
CNQ55_RS18670	COG3634	alkyl hydroperoxide reductase activity
CNQ55_RS18675	COG0450	alkyl hydroperoxide reductase
CNQ55_RS18680	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CNQ55_RS18685	COG0583	DNA-binding transcription factor activity
CNQ55_RS18695	COG1475	DNA binding
CNQ55_RS18700	COG0436	Aminotransferase
CNQ55_RS18705	COG0371	Dehydrogenase
CNQ55_RS18710	COG2879	small protein
CNQ55_RS18715	COG1966	Carbon starvation protein
CNQ55_RS18720	COG2050	protein possibly involved in aromatic compounds catabolism
CNQ55_RS18725	COG1028	Short-chain dehydrogenase reductase Sdr
CNQ55_RS18730	COG1535	isochorismatase
CNQ55_RS18730	COG3433	isochorismatase activity
CNQ55_RS18735	COG1021	2,3-dihydroxybenzoate-AMP ligase
CNQ55_RS18740	COG1169	isochorismate synthase
CNQ55_RS18745	COG4592	Periplasmic binding protein
CNQ55_RS18755	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CNQ55_RS18760	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CNQ55_RS18765	COG1120	ATPase activity
CNQ55_RS18770	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
CNQ55_RS18775	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
CNQ55_RS18775	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CNQ55_RS18780	COG3251	PFAM MbtH domain protein
CNQ55_RS18785	COG2382	esterase
CNQ55_RS18790	COG4771	TonB-dependent receptor
CNQ55_RS18795	COG2977	Belongs to the P-Pant transferase superfamily
CNQ55_RS18825	COG2315	Protein conserved in bacteria
CNQ55_RS18830	COG0778	Nitroreductase
CNQ55_RS18835	COG0668	transmembrane transport
CNQ55_RS18840	COG1113	amino acid transport
CNQ55_RS18845	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CNQ55_RS18850	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CNQ55_RS18855	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CNQ55_RS18860	COG1538	Outer membrane efflux protein
CNQ55_RS18870	COG0745	RESPONSE REGULATOR receiver
CNQ55_RS18875	COG5002	protein histidine kinase activity
CNQ55_RS18880	COG1215	transferase activity, transferring glycosyl groups
CNQ55_RS18885	COG4783	chaperone-mediated protein folding
CNQ55_RS18895	COG4571	Outer membrane protease
CNQ55_RS18900	COG0500	methyltransferase
CNQ55_RS18935	COG2501	S4 domain
CNQ55_RS18940	COG1988	membrane-bound metal-dependent
CNQ55_RS18950	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CNQ55_RS18970	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CNQ55_RS18975	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CNQ55_RS18990	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CNQ55_RS18995	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CNQ55_RS19000	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CNQ55_RS19005	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CNQ55_RS19010	COG3257	ureidoglycine aminohydrolase activity
CNQ55_RS19015	COG1929	Belongs to the glycerate kinase type-1 family
CNQ55_RS19020	COG2233	PERMEase
CNQ55_RS19030	COG1953	Uracil, thiamine, allantoin
CNQ55_RS19035	COG2084	Dehydrogenase
CNQ55_RS19040	COG3622	Belongs to the hyi family
CNQ55_RS19045	COG3960	tartronate-semialdehyde synthase activity
CNQ55_RS19050	COG1414	Transcriptional regulator
CNQ55_RS19070	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
CNQ55_RS19075	COG4181	ATPase activity
CNQ55_RS19080	COG2755	lipolytic protein G-D-S-L family
CNQ55_RS19085	COG0300	oxidoreductase activity
CNQ55_RS19090	COG3118	belongs to the thioredoxin family
CNQ55_RS19095	COG0390	transport system, permease component
CNQ55_RS19100	COG4619	ABC transporter
CNQ55_RS19105	COG0330	HflC and HflK could
CNQ55_RS19110	COG1585	Membrane protein implicated in regulation of membrane protease activity
CNQ55_RS19120	COG0789	Transcriptional regulator
CNQ55_RS19125	COG0531	amino acid
CNQ55_RS19135	COG2217	Heavy metal translocating P-type atpase
CNQ55_RS19140	COG3093	addiction module antidote protein HigA
CNQ55_RS19145	COG3549	Plasmid maintenance system killer
CNQ55_RS19150	COG3735	TraB family
CNQ55_RS19160	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CNQ55_RS19175	COG0737	Belongs to the 5'-nucleotidase family
CNQ55_RS19185	COG2223	nitrite transmembrane transporter activity
CNQ55_RS19190	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CNQ55_RS19190	COG4651	solute:proton antiporter activity
CNQ55_RS19195	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CNQ55_RS19235	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CNQ55_RS19250	COG2832	Protein of unknown function (DUF454)
CNQ55_RS19255	COG3923	Primosomal replication protein n
CNQ55_RS19265	COG3264	Mechanosensitive ion channel
CNQ55_RS19265	COG1196	nuclear chromosome segregation
CNQ55_RS19275	COG1309	transcriptional regulator
CNQ55_RS19280	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CNQ55_RS19285	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CNQ55_RS19300	COG0110	maltose O-acetyltransferase activity
CNQ55_RS19310	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CNQ55_RS19315	COG5507	3-demethylubiquinone-9 3-methyltransferase
CNQ55_RS19325	COG3695	enzyme binding
CNQ55_RS19330	COG3126	Type III secretion system lipoprotein chaperone (YscW)
CNQ55_RS19335	COG1946	Acyl-CoA thioesterase
CNQ55_RS19340	COG0004	ammonium transporteR
CNQ55_RS19345	COG0347	Belongs to the P(II) protein family
CNQ55_RS19350	COG1132	(ABC) transporter
CNQ55_RS19355	COG1132	(ABC) transporter
CNQ55_RS19360	COG1522	sequence-specific DNA binding
CNQ55_RS19370	COG4533	DNA binding
CNQ55_RS19380	COG0824	Thioesterase
CNQ55_RS19385	COG1555	photosystem II stabilization
CNQ55_RS19390	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CNQ55_RS19395	COG0776	regulation of translation
CNQ55_RS19400	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CNQ55_RS19425	COG0271	Belongs to the BolA IbaG family
CNQ55_RS19435	COG3056	Lipoprotein
CNQ55_RS19440	COG2223	nitrite transmembrane transporter activity
CNQ55_RS19445	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CNQ55_RS19450	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CNQ55_RS19455	COG1845	cytochrome c oxidase, subunit III
CNQ55_RS19460	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CNQ55_RS19470	COG2814	Major facilitator Superfamily
CNQ55_RS19480	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CNQ55_RS19485	COG0693	protein deglycase activity
CNQ55_RS19500	COG0142	geranyltranstransferase activity
CNQ55_RS19510	COG0667	Aldo Keto reductase
CNQ55_RS19515	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CNQ55_RS19520	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
CNQ55_RS19535	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CNQ55_RS19535	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CNQ55_RS19545	COG4238	major outer membrane lipoprotein
CNQ55_RS19550	COG3248	Nucleoside-binding outer membrane protein
CNQ55_RS19555	COG1403	HNH endonuclease
CNQ55_RS19560	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CNQ55_RS19565	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CNQ55_RS19570	COG1862	Preprotein translocase
CNQ55_RS19590	COG0366	Alpha amylase catalytic
CNQ55_RS19595	COG1113	amino acid transport
CNQ55_RS19600	COG1114	Component of the transport system for branched-chain amino acids
CNQ55_RS19605	COG5002	protein histidine kinase activity
CNQ55_RS19610	COG0745	RESPONSE REGULATOR receiver
CNQ55_RS19615	COG0420	3'-5' exonuclease activity
CNQ55_RS19620	COG0419	ATPase involved in DNA repair
CNQ55_RS19625	COG2814	Major facilitator Superfamily
CNQ55_RS19630	COG1940	carbohydrate kinase activity
CNQ55_RS19655	COG4126	flavin adenine dinucleotide binding
CNQ55_RS19680	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CNQ55_RS19685	COG3706	GGDEF domain
CNQ55_RS19695	COG1785	Belongs to the alkaline phosphatase family
CNQ55_RS19705	COG1181	Belongs to the D-alanine--D-alanine ligase family
CNQ55_RS19725	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
CNQ55_RS19735	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CNQ55_RS19740	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CNQ55_RS19745	COG3468	outer membrane autotransporter barrel domain protein
CNQ55_RS19750	COG0113	porphobilinogen synthase activity
CNQ55_RS19755	COG2175	clavaminate synthase activity
CNQ55_RS19760	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CNQ55_RS19770	COG4521	taurine ABC transporter
CNQ55_RS19780	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CNQ55_RS19785	COG1215	transferase activity, transferring glycosyl groups
CNQ55_RS19815	COG3122	Protein conserved in bacteria
CNQ55_RS19825	COG1609	Transcriptional regulator
CNQ55_RS19840	COG2223	nitrite transmembrane transporter activity
CNQ55_RS19845	COG0110	maltose O-acetyltransferase activity
CNQ55_RS19855	COG2801	Transposase and inactivated derivatives
CNQ55_RS19860	COG0402	S-adenosylhomocysteine deaminase activity
CNQ55_RS19865	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CNQ55_RS19870	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CNQ55_RS19875	COG2079	MmgE PrpD family protein
CNQ55_RS19880	COG0372	Belongs to the citrate synthase family
CNQ55_RS19885	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CNQ55_RS19890	COG3829	transcription factor binding
CNQ55_RS19900	COG1280	lysine exporter protein (LysE YggA)
CNQ55_RS19910	COG1064	alcohol dehydrogenase
CNQ55_RS19915	COG0402	S-adenosylhomocysteine deaminase activity
CNQ55_RS19920	COG0549	Belongs to the carbamate kinase family
CNQ55_RS19925	COG1304	FMN binding
CNQ55_RS19930	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CNQ55_RS19940	COG0666	response to abiotic stimulus
CNQ55_RS19955	COG0583	DNA-binding transcription factor activity
CNQ55_RS19960	COG2200	EAL domain
CNQ55_RS19960	COG2771	luxR family
CNQ55_RS19970	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CNQ55_RS20010	COG2771	luxR family
CNQ55_RS20010	COG2200	EAL domain
CNQ55_RS20025	COG3468	outer membrane autotransporter barrel domain protein
CNQ55_RS20045	COG1556	Lactate utilization protein
CNQ55_RS20050	COG1139	Iron-sulfur cluster binding protein
CNQ55_RS20055	COG0247	lactate metabolic process
CNQ55_RS20060	COG2207	Transcriptional regulator
CNQ55_RS20065	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CNQ55_RS20075	COG3059	membrane
CNQ55_RS20080	COG0656	L-ascorbic acid biosynthetic process
CNQ55_RS20085	COG3708	Transcriptional regulator
CNQ55_RS20085	COG2207	Transcriptional regulator
CNQ55_RS20090	COG1388	LysM domain
CNQ55_RS20090	COG4932	domain protein
CNQ55_RS20090	COG2373	Large extracellular alpha-helical protein
CNQ55_RS20095	COG0656	L-ascorbic acid biosynthetic process
CNQ55_RS20100	COG0667	Aldo Keto reductase
CNQ55_RS20110	COG0583	DNA-binding transcription factor activity
CNQ55_RS20115	COG1073	alpha beta
CNQ55_RS20120	COG1902	pentaerythritol trinitrate reductase activity
CNQ55_RS20185	COG0727	PFAM Uncharacterised protein family (UPF0153)
CNQ55_RS20195	COG3477	response to acidic pH
CNQ55_RS20225	COG0582	viral genome integration into host DNA
CNQ55_RS20265	COG2003	Belongs to the UPF0758 family
CNQ55_RS20285	COG3468	outer membrane autotransporter barrel domain protein
CNQ55_RS20310	COG0531	amino acid
CNQ55_RS20325	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CNQ55_RS20330	COG0583	DNA-binding transcription factor activity
CNQ55_RS20345	COG3436	PFAM IS66 Orf2 family protein
CNQ55_RS20375	COG0523	cobalamin synthesis protein
CNQ55_RS20385	COG4771	TonB-dependent receptor
CNQ55_RS20440	COG2382	esterase
CNQ55_RS20445	COG2819	hydrolase of the alpha beta superfamily
CNQ55_RS20495	COG3539	Fimbrial protein
CNQ55_RS20570	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CNQ55_RS20580	COG4644	lycopene metabolic process
CNQ55_RS20610	COG4983	Phage plasmid primase, P4 family domain protein
CNQ55_RS20650	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CNQ55_RS20670	COG2195	Cleaves the N-terminal amino acid of tripeptides
CNQ55_RS20675	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CNQ55_RS20680	COG1690	Belongs to the RtcB family
CNQ55_RS20685	COG0454	-acetyltransferase
CNQ55_RS20695	COG2161	toxin-antitoxin pair type II binding
CNQ55_RS20715	COG1943	Transposase
CNQ55_RS20720	COG0791	NLP P60 protein
CNQ55_RS20725	COG3034	peptidoglycan biosynthetic process
CNQ55_RS20730	COG0121	glutamine amidotransferase
CNQ55_RS20740	COG1960	acyl-CoA dehydrogenase activity
CNQ55_RS20750	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CNQ55_RS20790	COG3501	Rhs element vgr protein
CNQ55_RS20885	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CNQ55_RS20895	COG2226	methyltransferase
CNQ55_RS20905	COG1388	LysM domain
CNQ55_RS20905	COG0741	lytic transglycosylase activity
CNQ55_RS20910	COG2226	methyltransferase
CNQ55_RS20920	COG0583	DNA-binding transcription factor activity
CNQ55_RS20925	COG0656	L-ascorbic acid biosynthetic process
CNQ55_RS20960	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CNQ55_RS20970	COG2011	ABC-type metal ion transport system permease component
CNQ55_RS20975	COG1464	Belongs to the NlpA lipoprotein family
CNQ55_RS20985	COG1720	tRNA m6t6A37 methyltransferase activity
CNQ55_RS20995	COG0791	NLP P60 protein
CNQ55_RS21000	COG3015	lipoprotein NlpE involved in copper resistance
CNQ55_RS21005	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CNQ55_RS21010	COG4681	YaeQ
CNQ55_RS21020	COG4568	rho-dependent transcription termination
CNQ55_RS21025	COG0037	tRNA processing
CNQ55_RS21030	COG0346	lactoylglutathione lyase activity
CNQ55_RS21035	COG1982	Orn Lys Arg decarboxylase major
CNQ55_RS21045	COG0587	DNA-directed DNA polymerase activity
CNQ55_RS21070	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CNQ55_RS21075	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
CNQ55_RS21085	COG0750	zinc metalloprotease
CNQ55_RS21090	COG0575	Belongs to the CDS family
CNQ55_RS21095	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CNQ55_RS21100	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CNQ55_RS21130	COG0024	Methionine aminopeptidase
CNQ55_RS21150	COG3835	regulator
CNQ55_RS21155	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CNQ55_RS21175	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CNQ55_RS21180	COG2860	membrane
CNQ55_RS21200	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CNQ55_RS21205	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CNQ55_RS21210	COG1120	ATPase activity
CNQ55_RS21215	COG4774	siderophore transport
CNQ55_RS21220	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CNQ55_RS21225	COG1643	Atp-dependent helicase
CNQ55_RS21230	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
CNQ55_RS21240	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CNQ55_RS21245	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CNQ55_RS21250	COG0617	tRNA 3'-terminal CCA addition
CNQ55_RS21255	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CNQ55_RS21260	COG3539	Fimbrial protein
CNQ55_RS21265	COG3121	Chaperone
CNQ55_RS21270	COG3188	usher protein
CNQ55_RS21275	COG3539	Fimbrial protein
CNQ55_RS21280	COG3539	Fimbrial protein
CNQ55_RS21285	COG3539	Fimbrial protein
CNQ55_RS21290	COG3539	Fimbrial protein
CNQ55_RS21310	COG5464	transposase or invertase
CNQ55_RS21330	COG0726	polysaccharide deacetylase
CNQ55_RS21335	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CNQ55_RS21340	COG0842	Transport permease protein
CNQ55_RS21345	COG1131	(ABC) transporter
CNQ55_RS21350	COG0288	reversible hydration of carbon dioxide
CNQ55_RS21355	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
CNQ55_RS21360	COG4993	Dehydrogenase
CNQ55_RS21365	COG2132	Multicopper oxidase
CNQ55_RS21390	COG1049	propionate catabolic process, 2-methylcitrate cycle
CNQ55_RS21405	COG3064	Membrane
CNQ55_RS21410	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CNQ55_RS21415	COG0508	dehydrogenase complex catalyzes the overall conversion of
CNQ55_RS21420	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
CNQ55_RS21430	COG2186	Transcriptional regulator
CNQ55_RS21460	COG3157	Type VI secretion system effector, Hcp
CNQ55_RS21465	COG1113	amino acid transport
CNQ55_RS21470	COG3725	Membrane protein required for beta-lactamase induction
CNQ55_RS21475	COG3023	N-Acetylmuramoyl-L-alanine amidase
CNQ55_RS21480	COG0157	Belongs to the NadC ModD family
CNQ55_RS21490	COG4969	Belongs to the N-Me-Phe pilin family
CNQ55_RS21495	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CNQ55_RS21500	COG1459	type II secretion system
CNQ55_RS21510	COG0237	dephospho-CoA kinase activity
CNQ55_RS21525	COG0494	nUDIX hydrolase
CNQ55_RS21545	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CNQ55_RS21550	COG0849	cell division
CNQ55_RS21555	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CNQ55_RS21560	COG1181	Belongs to the D-alanine--D-alanine ligase family
CNQ55_RS21575	COG0772	Belongs to the SEDS family
CNQ55_RS21590	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CNQ55_RS21595	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CNQ55_RS21600	COG0768	penicillin binding
CNQ55_RS21605	COG3116	cell division
CNQ55_RS21625	COG1609	Transcriptional regulator
CNQ55_RS21635	COG0440	acetolactate synthase activity
CNQ55_RS21640	COG0028	Belongs to the TPP enzyme family
CNQ55_RS21645	COG0583	DNA-binding transcription factor activity
CNQ55_RS21660	COG0473	3-isopropylmalate dehydrogenase activity
CNQ55_RS21685	COG4143	(ABC) transporter
CNQ55_RS21690	COG1178	ABC-type Fe3 transport system permease component
CNQ55_RS21700	COG0586	Pfam SNARE associated Golgi protein
CNQ55_RS21715	COG4977	sequence-specific DNA binding
CNQ55_RS21735	COG0235	Class ii aldolase
CNQ55_RS21740	COG0417	DNA replication proofreading
CNQ55_RS21750	COG0564	pseudouridine synthase activity
CNQ55_RS21755	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CNQ55_RS21765	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CNQ55_RS21800	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CNQ55_RS21815	COG2271	Major facilitator Superfamily
CNQ55_RS21820	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
CNQ55_RS21825	COG0644	oxidoreductase
CNQ55_RS21880	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CNQ55_RS21885	COG0505	Belongs to the CarA family
CNQ55_RS21910	COG1047	Peptidyl-prolyl cis-trans
CNQ55_RS21925	COG0196	riboflavin kinase activity
CNQ55_RS21940	COG0583	DNA-binding transcription factor activity
CNQ55_RS21955	COG3119	arylsulfatase activity
CNQ55_RS21990	COG4735	regulation of single-species biofilm formation
CNQ55_RS21995	COG1584	GPR1 FUN34 yaaH family protein
CNQ55_RS22000	COG0521	Mo-molybdopterin cofactor biosynthetic process
CNQ55_RS22030	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
CNQ55_RS22040	COG0460	homoserine dehydrogenase
CNQ55_RS22040	COG0527	aspartate kinase activity
CNQ55_RS22050	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
CNQ55_RS22060	COG0745	RESPONSE REGULATOR receiver
CNQ55_RS22065	COG4452	Inner membrane protein CreD
CNQ55_RS22070	COG2205	protein histidine kinase activity
CNQ55_RS22075	COG0745	RESPONSE REGULATOR receiver
CNQ55_RS22080	COG3045	CreA protein
CNQ55_RS22085	COG2207	Transcriptional regulator
CNQ55_RS22085	COG3708	Transcriptional regulator
CNQ55_RS22105	COG0741	lytic transglycosylase activity
CNQ55_RS22110	COG0488	(ABC) transporter
CNQ55_RS22120	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
CNQ55_RS22125	COG3172	ATPase kinase involved in NAD metabolism
CNQ55_RS22125	COG1056	cytidyltransferase-related domain
CNQ55_RS22130	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CNQ55_RS22135	COG0560	Phosphoserine phosphatase
CNQ55_RS22140	COG3726	membrane protein affecting hemolysin expression
CNQ55_RS22175	COG1328	CTP reductase activity
CNQ55_RS22180	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CNQ55_RS22185	COG0084	hydrolase, TatD family'
CNQ55_RS22190	COG4667	esterase of the alpha-beta hydrolase superfamily
CNQ55_RS22200	COG2823	Periplasmic or secreted lipoprotein
CNQ55_RS22210	COG1011	Hydrolase
CNQ55_RS22215	COG0456	acetyltransferase
CNQ55_RS22220	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
CNQ55_RS22250	COG4114	ferric iron reductase
CNQ55_RS22255	COG2197	response regulator
CNQ55_RS22260	COG2197	response regulator
CNQ55_RS22265	COG2966	Psort location CytoplasmicMembrane, score
CNQ55_RS22280	COG1484	DNA-dependent DNA replication
CNQ55_RS22295	COG1063	alcohol dehydrogenase
CNQ55_RS22300	COG1802	Transcriptional regulator
CNQ55_RS22305	COG0025	NhaP-type Na H and K H
CNQ55_RS22310	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CNQ55_RS22320	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CNQ55_RS22325	COG0840	transmembrane signaling receptor activity
CNQ55_RS22335	COG1966	Carbon starvation protein
CNQ55_RS22340	COG2879	small protein
CNQ55_RS22345	COG0523	cobalamin synthesis protein
CNQ55_RS22380	COG5457	Domain of unknown function (DUF1127)
CNQ55_RS22390	COG2733	membrane
CNQ55_RS22395	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
CNQ55_RS22400	COG1924	4 iron, 4 sulfur cluster binding
CNQ55_RS22415	COG0477	Major facilitator Superfamily
CNQ55_RS22425	COG3366	ferrous iron transmembrane transporter activity
CNQ55_RS22430	COG0700	Nucleoside recognition
CNQ55_RS22435	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CNQ55_RS22440	COG0583	DNA-binding transcription factor activity
CNQ55_RS22460	COG2186	Transcriptional regulator
CNQ55_RS22465	COG0246	Mannitol dehydrogenase
CNQ55_RS22480	COG3539	Fimbrial protein
CNQ55_RS22485	COG3539	Fimbrial protein
CNQ55_RS22490	COG3539	Fimbrial protein
CNQ55_RS22495	COG3188	usher protein
CNQ55_RS22500	COG3121	Chaperone
CNQ55_RS22505	COG3539	Fimbrial protein
CNQ55_RS22510	COG3539	Fimbrial protein
CNQ55_RS22520	COG4974	Belongs to the 'phage' integrase family
CNQ55_RS22525	COG0582	viral genome integration into host DNA
CNQ55_RS22540	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CNQ55_RS22610	COG2003	Belongs to the UPF0758 family
CNQ55_RS22635	COG2378	regulation of single-species biofilm formation
CNQ55_RS22640	COG3596	GTP binding
CNQ55_RS22720	COG0232	Belongs to the dGTPase family. Type 2 subfamily
CNQ55_RS22760	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
CNQ55_RS22780	COG0582	viral genome integration into host DNA
CNQ55_RS22790	COG2194	sulfuric ester hydrolase activity
CNQ55_RS22795	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CNQ55_RS22795	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
CNQ55_RS22805	COG0582	viral genome integration into host DNA
CNQ55_RS22815	COG1064	alcohol dehydrogenase
CNQ55_RS22820	COG3265	gluconokinase activity
CNQ55_RS22830	COG1063	alcohol dehydrogenase
CNQ55_RS22835	COG1028	Short-chain dehydrogenase reductase Sdr
CNQ55_RS22840	COG2610	gluconate transmembrane transporter activity
CNQ55_RS22845	COG1609	Transcriptional regulator
CNQ55_RS22850	COG0433	COG0433 Predicted ATPase
CNQ55_RS22855	COG0795	lipopolysaccharide-transporting ATPase activity
CNQ55_RS22860	COG0795	lipopolysaccharide-transporting ATPase activity
CNQ55_RS22870	COG2927	DNA polymerase III (CHI subunit)
CNQ55_RS22875	COG0525	valine-tRNA ligase activity
CNQ55_RS22885	COG0456	acetyltransferase
CNQ55_RS22890	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
CNQ55_RS22895	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CNQ55_RS22900	COG2731	YhcH YjgK YiaL family protein
CNQ55_RS22910	COG0549	Belongs to the carbamate kinase family
CNQ55_RS22915	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CNQ55_RS22920	COG1288	antiporter activity
CNQ55_RS22925	COG1438	arginine binding
CNQ55_RS22945	COG0251	oxidation-reduction process
CNQ55_RS22950	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CNQ55_RS22955	COG1609	Transcriptional regulator
CNQ55_RS22960	COG1263	PTS System
CNQ55_RS22960	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ55_RS22965	COG0366	Alpha amylase catalytic
CNQ55_RS22970	COG1328	CTP reductase activity
CNQ55_RS22975	COG0602	queuosine metabolic process
CNQ55_RS22980	COG3783	Cytochrome b(562)
CNQ55_RS22985	COG0312	modulator of DNA gyrase
CNQ55_RS22995	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CNQ55_RS23005	COG1172	Belongs to the binding-protein-dependent transport system permease family
CNQ55_RS23010	COG1172	Belongs to the binding-protein-dependent transport system permease family
CNQ55_RS23015	COG1129	ABC transporter
CNQ55_RS23020	COG1879	ABC-type sugar transport system periplasmic component
CNQ55_RS23025	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CNQ55_RS23030	COG2105	PFAM AIG2 family protein
CNQ55_RS23035	COG2911	Protein conserved in bacteria
CNQ55_RS23040	COG0729	surface antigen
CNQ55_RS23050	COG1253	flavin adenine dinucleotide binding
CNQ55_RS23060	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
CNQ55_RS23065	COG1218	3'(2'),5'-bisphosphate nucleotidase
CNQ55_RS23070	COG0737	Belongs to the 5'-nucleotidase family
CNQ55_RS23075	COG1733	regulation of RNA biosynthetic process
CNQ55_RS23080	COG0702	epimerase
CNQ55_RS23085	COG0697	spore germination
CNQ55_RS23095	COG1113	amino acid transport
CNQ55_RS23100	COG0545	Peptidyl-prolyl cis-trans isomerase
CNQ55_RS23110	COG3061	Opacity-associated protein A
CNQ55_RS23115	COG1309	transcriptional regulator
CNQ55_RS23130	COG1024	Enoyl-CoA hydratase
CNQ55_RS23135	COG4670	ketone body catabolic process
CNQ55_RS23140	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CNQ55_RS23145	COG2271	Major facilitator Superfamily
CNQ55_RS23175	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CNQ55_RS23215	COG3414	Phosphotransferase system galactitol-specific IIB component
CNQ55_RS23220	COG3037	sugar-specific permease SgaT UlaA
CNQ55_RS23235	COG1073	alpha beta
CNQ55_RS23240	COG3650	response to hydrogen peroxide
CNQ55_RS23255	COG1960	acyl-CoA dehydrogenase activity
CNQ55_RS23260	COG0754	glutathionylspermidine amidase activity
CNQ55_RS23265	COG5463	Belongs to the UPF0441 family
CNQ55_RS23270	COG3766	membrane
CNQ55_RS23280	COG1842	Phage shock protein A
CNQ55_RS23285	COG3789	protein conserved in bacteria
CNQ55_RS23295	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CNQ55_RS23300	COG0557	exoribonuclease II activity
CNQ55_RS23315	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
CNQ55_RS23320	COG0330	HflC and HflK could
CNQ55_RS23325	COG0330	HflC and HflK could
CNQ55_RS23330	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CNQ55_RS23350	COG0860	N-Acetylmuramoyl-L-alanine amidase
CNQ55_RS23355	COG0802	atpase or kinase
CNQ55_RS23360	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CNQ55_RS23360	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CNQ55_RS23365	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CNQ55_RS23405	COG1511	domain protein
CNQ55_RS23405	COG3264	Mechanosensitive ion channel
CNQ55_RS23410	COG0531	amino acid
CNQ55_RS23420	COG1053	succinate dehydrogenase
CNQ55_RS23425	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CNQ55_RS23440	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CNQ55_RS23445	COG3040	lipid binding
CNQ55_RS23450	COG2076	Multidrug Resistance protein
CNQ55_RS23455	COG5510	response to toxic substance
CNQ55_RS23460	COG5510	response to toxic substance
CNQ55_RS23470	COG1509	lysine 2,3-aminomutase activity
CNQ55_RS23495	COG0531	amino acid
CNQ55_RS23500	COG3030	protein affecting phage T7 exclusion by the F plasmid
CNQ55_RS23505	COG1027	Aspartate ammonia-lyase
CNQ55_RS23510	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CNQ55_RS23525	COG1309	transcriptional regulator
CNQ55_RS23535	COG0582	viral genome integration into host DNA
CNQ55_RS23550	COG2194	sulfuric ester hydrolase activity
CNQ55_RS23740	COG3547	Transposase (IS116 IS110 IS902 family)
CNQ55_RS23795	COG3385	transposase activity
CNQ55_RS23820	COG3468	outer membrane autotransporter barrel domain protein
CNQ55_RS23860	COG2003	Belongs to the UPF0758 family
CNQ55_RS23900	COG3710	Transcriptional regulator
CNQ55_RS23910	COG0531	amino acid
CNQ55_RS23915	COG1982	Orn Lys Arg decarboxylase major
CNQ55_RS23920	COG3104	oligopeptide transport
CNQ55_RS23925	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CNQ55_RS23940	COG2388	GCN5-related N-acetyl-transferase
CNQ55_RS23945	COG3592	Divergent 4Fe-4S mono-cluster
CNQ55_RS23950	COG3290	protein histidine kinase activity
CNQ55_RS23955	COG4565	transcriptional regulatory protein
CNQ55_RS23965	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CNQ55_RS23970	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CNQ55_RS23970	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CNQ55_RS23975	COG3647	Membrane
CNQ55_RS23980	COG1486	melibiose metabolic process
CNQ55_RS23990	COG2169	Transcriptional regulator
CNQ55_RS23995	COG1982	Orn Lys Arg decarboxylase major
CNQ55_RS24000	COG2207	Transcriptional regulator
CNQ55_RS24005	COG0531	amino acid
CNQ55_RS24010	COG2194	sulfuric ester hydrolase activity
CNQ55_RS24015	COG0745	RESPONSE REGULATOR receiver
CNQ55_RS24020	COG0642	Histidine kinase
CNQ55_RS24030	COG0477	Major facilitator Superfamily
CNQ55_RS24050	COG2824	Alkylphosphonate utilization operon protein PhnA
CNQ55_RS24055	COG2764	glyoxalase bleomycin resistance protein dioxygenase
CNQ55_RS24065	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
CNQ55_RS24070	COG3639	organic phosphonate transmembrane transporter activity
CNQ55_RS24075	COG2188	Transcriptional regulator
CNQ55_RS24080	COG3624	Phosphonate C-P lyase system protein PhnG
CNQ55_RS24085	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
CNQ55_RS24090	COG3626	phosphonate metabolism
CNQ55_RS24095	COG3627	carbon phosphorus lyase activity
CNQ55_RS24100	COG4107	phosphonate C-P lyase system protein PhnK
CNQ55_RS24105	COG4778	phosphonate C-P lyase system protein PhnL
CNQ55_RS24110	COG3454	Phosphonate metabolism
CNQ55_RS24120	COG0456	acetyltransferase
CNQ55_RS24125	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CNQ55_RS24135	COG0698	ribose 5-phosphate isomerase
CNQ55_RS24145	COG1737	Transcriptional regulator
CNQ55_RS24150	COG1879	ABC-type sugar transport system periplasmic component
CNQ55_RS24155	COG1129	ABC transporter
CNQ55_RS24160	COG1172	Belongs to the binding-protein-dependent transport system permease family
CNQ55_RS24165	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CNQ55_RS24170	COG1940	carbohydrate kinase activity
CNQ55_RS24175	COG2015	COG2015, Alkyl sulfatase and related hydrolases
CNQ55_RS24185	COG1566	PFAM secretion protein HlyD family protein
CNQ55_RS24190	COG1289	transmembrane transporter activity
CNQ55_RS24210	COG0601	transmembrane transport
CNQ55_RS24215	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CNQ55_RS24220	COG0444	Belongs to the ABC transporter superfamily
CNQ55_RS24225	COG4608	Belongs to the ABC transporter superfamily
CNQ55_RS24230	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
CNQ55_RS24235	COG1301	dicarboxylic acid transport
CNQ55_RS24245	COG4235	cytochrome complex assembly
CNQ55_RS24250	COG3088	subunit of a heme lyase
CNQ55_RS24255	COG1138	Cytochrome C-type biogenesis protein
CNQ55_RS24260	COG3301	Polysulphide reductase, NrfD
CNQ55_RS24265	COG0437	4 iron, 4 sulfur cluster binding
CNQ55_RS24270	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
CNQ55_RS24290	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CNQ55_RS24295	COG3162	membrane
CNQ55_RS24305	COG1346	cytolysis
CNQ55_RS24310	COG1380	Effector of murein hydrolase LrgA
CNQ55_RS24320	COG0025	NhaP-type Na H and K H
CNQ55_RS24325	COG2252	PERMEase
CNQ55_RS24345	COG0789	Transcriptional regulator
CNQ55_RS24350	COG2207	Transcriptional regulator
CNQ55_RS24355	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CNQ55_RS24370	COG0629	single-stranded DNA binding
CNQ55_RS24375	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CNQ55_RS24380	COG2315	Protein conserved in bacteria
CNQ55_RS24385	COG0432	Pfam Uncharacterised protein family UPF0047
CNQ55_RS24390	COG3700	Belongs to the class B bacterial acid phosphatase family
CNQ55_RS24400	COG2204	response regulator
CNQ55_RS24405	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CNQ55_RS24410	COG0471	metal ion transport
CNQ55_RS24415	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CNQ55_RS24420	COG0045	succinate-CoA ligase (ADP-forming) activity
CNQ55_RS24425	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CNQ55_RS24435	COG0567	Dehydrogenase, E1 component
CNQ55_RS24440	COG1448	Aminotransferase
CNQ55_RS24450	COG3201	nicotinamide mononucleotide transporter
CNQ55_RS24455	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CNQ55_RS24465	COG0305	Participates in initiation and elongation during chromosome replication
CNQ55_RS24470	COG0604	alcohol dehydrogenase
CNQ55_RS24480	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CNQ55_RS24485	COG0735	belongs to the Fur family
CNQ55_RS24490	COG3237	CsbD-like
CNQ55_RS24495	COG0534	Mate efflux family protein
CNQ55_RS24505	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CNQ55_RS24550	COG2182	Extracellular solute-binding protein
CNQ55_RS24555	COG1175	transmembrane transport
CNQ55_RS24560	COG3833	ABC-type maltose transport systems, permease component
CNQ55_RS24575	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CNQ55_RS24610	COG0527	aspartate kinase activity
CNQ55_RS24620	COG1187	pseudouridine synthase activity
CNQ55_RS24670	COG1283	sodium-dependent phosphate transmembrane transporter activity
CNQ55_RS24685	COG0646	methionine synthase
CNQ55_RS24685	COG1410	methionine synthase
CNQ55_RS24690	COG1414	Transcriptional regulator
CNQ55_RS24700	COG2224	Isocitrate lyase
CNQ55_RS24705	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CNQ55_RS24715	COG0456	acetyltransferase
CNQ55_RS24750	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
CNQ55_RS24755	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CNQ55_RS24760	COG1739	Uncharacterized protein family UPF0029
CNQ55_RS24780	COG0543	2 iron, 2 sulfur cluster binding
CNQ55_RS24785	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CNQ55_RS24800	COG0805	protein transport
CNQ55_RS24810	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CNQ55_RS24820	COG3165	ubiquinone biosynthetic process from chorismate
CNQ55_RS24830	COG1322	Protein conserved in bacteria
CNQ55_RS24835	COG1414	Transcriptional regulator
CNQ55_RS24840	COG3734	2-keto-3-deoxy-galactonokinase
CNQ55_RS24845	COG0800	Aldolase
CNQ55_RS24865	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
CNQ55_RS24870	COG0412	Dienelactone hydrolase
CNQ55_RS24875	COG1335	isochorismatase
CNQ55_RS24885	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CNQ55_RS24890	COG1304	FMN binding
CNQ55_RS24895	COG0549	Belongs to the carbamate kinase family
CNQ55_RS24905	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CNQ55_RS24910	COG0583	DNA-binding transcription factor activity
CNQ55_RS24915	COG1737	Transcriptional regulator
CNQ55_RS24920	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CNQ55_RS24925	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CNQ55_RS24925	COG2190	(PTS) system
CNQ55_RS24925	COG1263	PTS System
CNQ55_RS24935	COG3157	Type VI secretion system effector, Hcp
CNQ55_RS24955	COG0583	DNA-binding transcription factor activity
CNQ55_RS24960	COG0697	spore germination
CNQ55_RS24965	COG0561	phosphatase activity
CNQ55_RS24970	COG2267	carboxylic ester hydrolase activity
CNQ55_RS24975	COG1280	lysine exporter protein (LysE YggA)
CNQ55_RS24980	COG1280	lysine exporter protein (LysE YggA)
CNQ55_RS24985	COG0514	ATP-dependent DNA helicase (RecQ)
CNQ55_RS24990	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
CNQ55_RS24995	COG2050	protein possibly involved in aromatic compounds catabolism
CNQ55_RS25000	COG2962	Rard protein
CNQ55_RS25015	COG0598	Magnesium transport protein CorA
CNQ55_RS25020	COG3698	Phosphodiester glycosidase
CNQ55_RS25025	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
CNQ55_RS25030	COG0210	DNA helicase
CNQ55_RS25035	COG1011	Hydrolase
CNQ55_RS25045	COG3159	Protein conserved in bacteria
CNQ55_RS25055	COG5567	small periplasmic lipoprotein
CNQ55_RS25070	COG3072	Adenylate cyclase
CNQ55_RS25080	COG0181	hydroxymethylbilane synthase activity
CNQ55_RS25085	COG1587	Uroporphyrinogen-III synthase
CNQ55_RS25090	COG2959	enzyme of heme biosynthesis
CNQ55_RS25095	COG3071	HemY protein
CNQ55_RS25100	COG3119	arylsulfatase activity
CNQ55_RS25105	COG0641	radical SAM
CNQ55_RS25130	COG1113	amino acid transport
CNQ55_RS25150	COG2244	polysaccharide biosynthetic process
CNQ55_RS25155	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CNQ55_RS25160	COG0456	acetyltransferase
CNQ55_RS25165	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CNQ55_RS25170	COG1088	dTDP-glucose 4,6-dehydratase activity
CNQ55_RS25175	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CNQ55_RS25180	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CNQ55_RS25185	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
CNQ55_RS25190	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CNQ55_RS25200	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CNQ55_RS25210	COG3118	belongs to the thioredoxin family
CNQ55_RS25230	COG0210	DNA helicase
CNQ55_RS25235	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CNQ55_RS25245	COG0583	DNA-binding transcription factor activity
CNQ55_RS25250	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CNQ55_RS25260	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CNQ55_RS25265	COG3978	acetolactate synthase activity
CNQ55_RS25285	COG0606	chelatase, subunit chli
CNQ55_RS25290	COG3085	chromosome segregation
CNQ55_RS25340	COG0151	Belongs to the GarS family
CNQ55_RS25345	COG2204	response regulator
CNQ55_RS25350	COG4191	Histidine kinase
CNQ55_RS25360	COG3678	ATP-independent chaperone mediated protein folding
CNQ55_RS25375	COG3068	Protein conserved in bacteria
CNQ55_RS25410	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CNQ55_RS25415	COG2104	thiamine diphosphate biosynthetic process
CNQ55_RS25425	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CNQ55_RS25465	COG0250	Participates in transcription elongation, termination and antitermination
CNQ55_RS25470	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CNQ55_RS25515	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
CNQ55_RS25515	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
CNQ55_RS25520	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CNQ55_RS25545	COG2186	Transcriptional regulator
CNQ55_RS25550	COG0477	Major facilitator Superfamily
CNQ55_RS25555	COG1609	Transcriptional regulator
CNQ55_RS25560	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CNQ55_RS25565	COG1879	ABC-type sugar transport system periplasmic component
CNQ55_RS25570	COG1172	Belongs to the binding-protein-dependent transport system permease family
CNQ55_RS25575	COG1129	ABC transporter
CNQ55_RS25605	COG1522	sequence-specific DNA binding
CNQ55_RS25610	COG0716	FMN binding
CNQ55_RS25705	COG1475	DNA binding
CNQ55_RS25970	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
CNQ55_RS26030	COG3344	reverse transcriptase
CNQ55_RS26105	COG4591	ABC-type transport system involved in lipoprotein release permease component
CNQ55_RS26135	COG1475	DNA binding
CNQ55_RS26140	COG3969	phosphoadenosine phosphosulfate
CNQ55_RS26145	COG2771	luxR family
CNQ55_RS26155	COG5295	Hep Hag repeat protein
CNQ55_RS26160	COG3210	domain, Protein
CNQ55_RS26160	COG3468	outer membrane autotransporter barrel domain protein
CNQ55_RS26170	COG5295	Hep Hag repeat protein