CNQ55_RS00005 SM01228 CNQ55_RS00005 CNQ55_RS00050 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS00085 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS00095 SM01061 CAT RNA binding domain CNQ55_RS00185 SM01234 CNQ55_RS00185 CNQ55_RS00205 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS00205 SM00760 Bacterial dnaA protein helix-turn-helix domain CNQ55_RS00210 SM00480 DNA polymerase III beta subunit CNQ55_RS00220 SM00387 Histidine kinase-like ATPases CNQ55_RS00220 SM00433 TopoisomeraseII CNQ55_RS00240 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNQ55_RS00240 SM00895 CNQ55_RS00240 CNQ55_RS00255 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CNQ55_RS00295 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS00365 SM00421 helix_turn_helix, Lux Regulon CNQ55_RS00365 SM00448 cheY-homologous receiver domain CNQ55_RS00370 SM00387 Histidine kinase-like ATPases CNQ55_RS00510 SM00487 DEAD-like helicases superfamily CNQ55_RS00510 SM00490 helicase superfamily c-terminal domain CNQ55_RS00520 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CNQ55_RS00520 SM00954 Region found in RelA / SpoT proteins CNQ55_RS00525 SM01409 CNQ55_RS00525 CNQ55_RS00530 SM00072 Guanylate kinase homologues. CNQ55_RS00535 SM00532 Ligase N family CNQ55_RS00600 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CNQ55_RS00600 SM01232 CNQ55_RS00600 CNQ55_RS00680 SM00829 Enoylreductase CNQ55_RS00710 SM00450 Rhodanese Homology Domain CNQ55_RS00730 SM00971 Serine acetyltransferase, N-terminal CNQ55_RS00745 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNQ55_RS00745 SM00895 CNQ55_RS00745 CNQ55_RS00830 SM01007 Class II Aldolase and Adducin N-terminal domain CNQ55_RS00840 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CNQ55_RS00880 SM00346 helix_turn_helix isocitrate lyase regulation CNQ55_RS00895 SM00642 Alpha-amylase domain CNQ55_RS00900 SM00047 Lysozyme subfamily 2 CNQ55_RS00905 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS00915 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS00970 SM00357 Cold shock protein domain CNQ55_RS00975 SM00530 Helix-turn-helix XRE-family like proteins CNQ55_RS01055 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS01060 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS01125 SM00028 Tetratricopeptide repeats CNQ55_RS01130 SM00052 Putative diguanylate phosphodiesterase CNQ55_RS01130 SM00267 diguanylate cyclase CNQ55_RS01165 SM00052 Putative diguanylate phosphodiesterase CNQ55_RS01190 SM00421 helix_turn_helix, Lux Regulon CNQ55_RS01200 SM01235 CNQ55_RS01200 CNQ55_RS01210 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS01215 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS01265 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS01285 SM00729 Elongator protein 3, MiaB family, Radical SAM CNQ55_RS01315 SM00421 helix_turn_helix, Lux Regulon CNQ55_RS01420 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS01435 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS01440 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS01515 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS01515 SM00962 SRP54-type protein, GTPase domain CNQ55_RS01515 SM00963 SRP54-type protein, helical bundle domain CNQ55_RS01520 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS01565 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS01570 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS01590 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS01650 SM00354 helix_turn _helix lactose operon repressor CNQ55_RS01665 SM00487 DEAD-like helicases superfamily CNQ55_RS01665 SM00490 helicase superfamily c-terminal domain CNQ55_RS01680 SM00859 Semialdehyde dehydrogenase, NAD binding domain CNQ55_RS01685 SM00642 Alpha-amylase domain CNQ55_RS01690 SM00642 Alpha-amylase domain CNQ55_RS01765 SM00450 Rhodanese Homology Domain CNQ55_RS01775 SM00420 helix_turn_helix, Deoxyribose operon repressor CNQ55_RS01775 SM01134 CNQ55_RS01775 CNQ55_RS01780 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS01795 SM00421 helix_turn_helix, Lux Regulon CNQ55_RS01850 SM00899 CNQ55_RS01850 CNQ55_RS01860 SM00316 Ribosomal protein S1-like RNA-binding domain CNQ55_RS01860 SM00732 Likely ribonuclease with RNase H fold. CNQ55_RS01875 SM00448 cheY-homologous receiver domain CNQ55_RS01875 SM00862 Transcriptional regulatory protein, C terminal CNQ55_RS01880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CNQ55_RS01880 SM00387 Histidine kinase-like ATPases CNQ55_RS01880 SM00388 His Kinase A (phosphoacceptor) domain CNQ55_RS01905 SM00363 S4 RNA-binding domain CNQ55_RS01950 SM00965 Secretin and TonB N terminus short domain CNQ55_RS02090 SM00100 Cyclic nucleotide-monophosphate binding domain CNQ55_RS02090 SM00419 helix_turn_helix, cAMP Regulatory protein CNQ55_RS02120 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS02190 SM00838 Elongation factor G C-terminus CNQ55_RS02190 SM00889 Elongation factor G, domain IV CNQ55_RS02205 SM00495 Chitin-binding domain type 3 CNQ55_RS02265 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS02300 SM01403 CNQ55_RS02300 CNQ55_RS02320 SM01382 CNQ55_RS02320 CNQ55_RS02320 SM01383 CNQ55_RS02320 CNQ55_RS02335 SM00322 K homology RNA-binding domain CNQ55_RS02355 SM01374 CNQ55_RS02355 CNQ55_RS02360 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CNQ55_RS02425 SM00363 S4 RNA-binding domain CNQ55_RS02425 SM01390 CNQ55_RS02425 CNQ55_RS02430 SM00662 RNA polymerases D CNQ55_RS02445 SM00422 helix_turn_helix, mercury resistance CNQ55_RS02570 SM00563 Phosphate acyltransferases CNQ55_RS02580 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CNQ55_RS02580 SM00474 3'-5' exonuclease CNQ55_RS02580 SM00475 5'-3' exonuclease CNQ55_RS02580 SM00482 DNA polymerase A domain CNQ55_RS02600 SM00729 Elongator protein 3, MiaB family, Radical SAM CNQ55_RS02610 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS02610 SM00448 cheY-homologous receiver domain CNQ55_RS02615 SM00091 PAS domain CNQ55_RS02615 SM00387 Histidine kinase-like ATPases CNQ55_RS02615 SM00388 His Kinase A (phosphoacceptor) domain CNQ55_RS02620 SM01230 CNQ55_RS02620 CNQ55_RS02635 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNQ55_RS02635 SM00866 CNQ55_RS02635 CNQ55_RS02650 SM00420 helix_turn_helix, Deoxyribose operon repressor CNQ55_RS02650 SM01134 CNQ55_RS02650 CNQ55_RS02665 SM01133 CNQ55_RS02665 CNQ55_RS02670 SM00829 Enoylreductase CNQ55_RS02720 SM00530 Helix-turn-helix XRE-family like proteins CNQ55_RS02780 SM01007 Class II Aldolase and Adducin N-terminal domain CNQ55_RS02795 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS02800 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS02830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CNQ55_RS02830 SM00387 Histidine kinase-like ATPases CNQ55_RS02830 SM00388 His Kinase A (phosphoacceptor) domain CNQ55_RS02835 SM00448 cheY-homologous receiver domain CNQ55_RS02835 SM00862 Transcriptional regulatory protein, C terminal CNQ55_RS02930 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS02930 SM01086 C-terminal, D2-small domain, of ClpB protein CNQ55_RS02945 SM00354 helix_turn _helix lactose operon repressor CNQ55_RS02950 SM00487 DEAD-like helicases superfamily CNQ55_RS02950 SM00490 helicase superfamily c-terminal domain CNQ55_RS03065 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS03085 SM00859 Semialdehyde dehydrogenase, NAD binding domain CNQ55_RS03100 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CNQ55_RS03190 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS03205 SM00062 Bacterial periplasmic substrate-binding proteins CNQ55_RS03285 SM00420 helix_turn_helix, Deoxyribose operon repressor CNQ55_RS03285 SM01134 CNQ55_RS03285 CNQ55_RS03300 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS03320 SM00878 Biotin carboxylase C-terminal domain CNQ55_RS03340 SM00829 Enoylreductase CNQ55_RS03345 SM00052 Putative diguanylate phosphodiesterase CNQ55_RS03345 SM00267 diguanylate cyclase CNQ55_RS03380 SM00316 Ribosomal protein S1-like RNA-binding domain CNQ55_RS03435 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CNQ55_RS03440 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CNQ55_RS03485 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNQ55_RS03485 SM00895 CNQ55_RS03485 CNQ55_RS03490 SM01130 CNQ55_RS03490 CNQ55_RS03540 SM00729 Elongator protein 3, MiaB family, Radical SAM CNQ55_RS03545 SM00073 Histidine Phosphotransfer domain CNQ55_RS03545 SM00091 PAS domain CNQ55_RS03545 SM00387 Histidine kinase-like ATPases CNQ55_RS03545 SM00388 His Kinase A (phosphoacceptor) domain CNQ55_RS03545 SM00448 cheY-homologous receiver domain CNQ55_RS03590 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS03620 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS03695 SM01103 CNQ55_RS03695 CNQ55_RS03705 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS03755 SM00316 Ribosomal protein S1-like RNA-binding domain CNQ55_RS03775 SM01387 CNQ55_RS03775 CNQ55_RS03780 SM00316 Ribosomal protein S1-like RNA-binding domain CNQ55_RS03780 SM00322 K homology RNA-binding domain CNQ55_RS03785 SM00028 Tetratricopeptide repeats CNQ55_RS03795 SM00487 DEAD-like helicases superfamily CNQ55_RS03795 SM00490 helicase superfamily c-terminal domain CNQ55_RS03830 SM00465 GIY-YIG type nucleases (URI domain) CNQ55_RS03845 SM00859 Semialdehyde dehydrogenase, NAD binding domain CNQ55_RS03855 SM00749 bacterial OsmY and nodulation domain CNQ55_RS03945 SM00420 helix_turn_helix, Deoxyribose operon repressor CNQ55_RS03945 SM01134 CNQ55_RS03945 CNQ55_RS03960 SM00858 CNQ55_RS03960 CNQ55_RS04100 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNQ55_RS04100 SM00895 CNQ55_RS04100 CNQ55_RS04135 SM00858 CNQ55_RS04135 CNQ55_RS04180 SM00530 Helix-turn-helix XRE-family like proteins CNQ55_RS04210 SM01038 Beta galactosidase small chain CNQ55_RS04215 SM00354 helix_turn _helix lactose operon repressor CNQ55_RS04240 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CNQ55_RS04240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CNQ55_RS04280 SM00400 zinc finger CNQ55_RS04280 SM00493 CNQ55_RS04280 CNQ55_RS04280 SM00766 DNA primase DnaG DnaB-binding CNQ55_RS04325 SM01207 CNQ55_RS04325 CNQ55_RS04330 SM00905 Dihydroneopterin aldolase CNQ55_RS04345 SM00287 Bacterial SH3 domain homologues CNQ55_RS04355 SM01118 CNQ55_RS04355 CNQ55_RS04375 SM00244 prohibitin homologues CNQ55_RS04470 SM00387 Histidine kinase-like ATPases CNQ55_RS04470 SM00433 TopoisomeraseII CNQ55_RS04505 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNQ55_RS04505 SM00866 CNQ55_RS04505 CNQ55_RS04525 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS04570 SM00387 Histidine kinase-like ATPases CNQ55_RS04570 SM00388 His Kinase A (phosphoacceptor) domain CNQ55_RS04575 SM00448 cheY-homologous receiver domain CNQ55_RS04575 SM00862 Transcriptional regulatory protein, C terminal CNQ55_RS04585 SM00871 Bacterial transcription activator, effector binding domain CNQ55_RS04595 SM00434 DNA Topoisomerase IV CNQ55_RS04600 SM00563 Phosphate acyltransferases CNQ55_RS04640 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNQ55_RS04640 SM00895 CNQ55_RS04640 CNQ55_RS04645 SM00729 Elongator protein 3, MiaB family, Radical SAM CNQ55_RS04670 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS04855 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNQ55_RS04855 SM00895 CNQ55_RS04855 CNQ55_RS04895 SM01276 CNQ55_RS04895 CNQ55_RS04925 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS04975 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS04990 SM00028 Tetratricopeptide repeats CNQ55_RS05105 SM00869 Autotransporter beta-domain CNQ55_RS05180 SM00420 helix_turn_helix, Deoxyribose operon repressor CNQ55_RS05180 SM01134 CNQ55_RS05180 CNQ55_RS05220 SM00354 helix_turn _helix lactose operon repressor CNQ55_RS05230 SM00825 Beta-ketoacyl synthase CNQ55_RS05245 SM00825 Beta-ketoacyl synthase CNQ55_RS05300 SM00563 Phosphate acyltransferases CNQ55_RS05330 SM00710 Parallel beta-helix repeats CNQ55_RS05330 SM00912 haemagglutination activity domain CNQ55_RS05420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CNQ55_RS05420 SM00387 Histidine kinase-like ATPases CNQ55_RS05420 SM00388 His Kinase A (phosphoacceptor) domain CNQ55_RS05425 SM00448 cheY-homologous receiver domain CNQ55_RS05445 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS05505 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS05530 SM00421 helix_turn_helix, Lux Regulon CNQ55_RS05565 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS05615 SM00478 endonuclease III CNQ55_RS05615 SM00525 CNQ55_RS05615 CNQ55_RS05640 SM00870 CNQ55_RS05640 CNQ55_RS05650 SM00729 Elongator protein 3, MiaB family, Radical SAM CNQ55_RS05660 SM01152 CNQ55_RS05660 CNQ55_RS05675 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS05680 SM00732 Likely ribonuclease with RNase H fold. CNQ55_RS05705 SM00731 SprT homologues. CNQ55_RS05755 SM00861 Transketolase, pyrimidine binding domain CNQ55_RS05760 SM00244 prohibitin homologues CNQ55_RS05795 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS05800 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS05825 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CNQ55_RS05925 SM01011 Aminopeptidase P, N-terminal domain CNQ55_RS05960 SM01022 CNQ55_RS05960 CNQ55_RS06060 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CNQ55_RS06065 SM01092 CO dehydrogenase flavoprotein C-terminal domain CNQ55_RS06120 SM00091 PAS domain CNQ55_RS06120 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS06130 SM01092 CO dehydrogenase flavoprotein C-terminal domain CNQ55_RS06135 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CNQ55_RS06145 SM00257 Lysin motif CNQ55_RS06195 SM00354 helix_turn _helix lactose operon repressor CNQ55_RS06200 SM00563 Phosphate acyltransferases CNQ55_RS06225 SM00927 DNA mismatch repair enzyme MutH CNQ55_RS06235 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CNQ55_RS06285 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS06295 SM00646 CNQ55_RS06295 CNQ55_RS06300 SM01061 CAT RNA binding domain CNQ55_RS06380 SM01351 CNQ55_RS06380 CNQ55_RS06390 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS06390 SM01086 C-terminal, D2-small domain, of ClpB protein CNQ55_RS06445 SM00925 MltA specific insert domain CNQ55_RS06485 SM00420 helix_turn_helix, Deoxyribose operon repressor CNQ55_RS06485 SM01134 CNQ55_RS06485 CNQ55_RS06510 SM01007 Class II Aldolase and Adducin N-terminal domain CNQ55_RS06520 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CNQ55_RS06520 SM00475 5'-3' exonuclease CNQ55_RS06570 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CNQ55_RS06575 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CNQ55_RS06580 SM00073 Histidine Phosphotransfer domain CNQ55_RS06580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CNQ55_RS06580 SM00387 Histidine kinase-like ATPases CNQ55_RS06580 SM00388 His Kinase A (phosphoacceptor) domain CNQ55_RS06580 SM00448 cheY-homologous receiver domain CNQ55_RS06590 SM00954 Region found in RelA / SpoT proteins CNQ55_RS06595 SM00966 SpoVT / AbrB like domain CNQ55_RS06615 SM01192 CNQ55_RS06615 CNQ55_RS06615 SM01193 CNQ55_RS06615 CNQ55_RS06645 SM00354 helix_turn _helix lactose operon repressor CNQ55_RS06650 SM00640 Glycosyl hydrolases family 32 CNQ55_RS06695 SM00893 Electron transfer flavoprotein domain CNQ55_RS06805 SM00257 Lysin motif CNQ55_RS06820 SM00849 Metallo-beta-lactamase superfamily CNQ55_RS06835 SM01007 Class II Aldolase and Adducin N-terminal domain CNQ55_RS06850 SM00420 helix_turn_helix, Deoxyribose operon repressor CNQ55_RS06850 SM01134 CNQ55_RS06850 CNQ55_RS06860 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CNQ55_RS06860 SM00534 ATPase domain of DNA mismatch repair MUTS family CNQ55_RS06925 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CNQ55_RS06925 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS07010 SM00530 Helix-turn-helix XRE-family like proteins CNQ55_RS07025 SM00354 helix_turn _helix lactose operon repressor CNQ55_RS07045 SM00849 Metallo-beta-lactamase superfamily CNQ55_RS07050 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CNQ55_RS07050 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS07060 SM00420 helix_turn_helix, Deoxyribose operon repressor CNQ55_RS07060 SM01134 CNQ55_RS07060 CNQ55_RS07100 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS07110 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CNQ55_RS07175 SM00347 helix_turn_helix multiple antibiotic resistance protein CNQ55_RS07205 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS07245 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNQ55_RS07265 SM00528 Domain in histone-like proteins of HNS family CNQ55_RS07275 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CNQ55_RS07285 SM00257 Lysin motif CNQ55_RS07285 SM00749 bacterial OsmY and nodulation domain CNQ55_RS07290 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNQ55_RS07290 SM00895 CNQ55_RS07290 CNQ55_RS07370 SM01091 Transporter associated domain CNQ55_RS07380 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS07380 SM00962 SRP54-type protein, GTPase domain CNQ55_RS07380 SM00963 SRP54-type protein, helical bundle domain CNQ55_RS07410 SM00267 diguanylate cyclase CNQ55_RS07430 SM00830 Chorismate mutase type II CNQ55_RS07435 SM00830 Chorismate mutase type II CNQ55_RS07455 SM00363 S4 RNA-binding domain CNQ55_RS07465 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS07465 SM01086 C-terminal, D2-small domain, of ClpB protein CNQ55_RS07525 SM00155 Phospholipase D. Active site motifs. CNQ55_RS07530 SM00881 CoA binding domain CNQ55_RS07535 SM01144 CNQ55_RS07535 CNQ55_RS07550 SM00967 RNA 2'-O ribose methyltransferase substrate binding CNQ55_RS07555 SM00986 Uracil DNA glycosylase superfamily CNQ55_RS07555 SM00987 UreE urease accessory protein, C-terminal domain CNQ55_RS07575 SM00487 DEAD-like helicases superfamily CNQ55_RS07575 SM00490 helicase superfamily c-terminal domain CNQ55_RS07625 SM00358 Double-stranded RNA binding motif CNQ55_RS07625 SM00535 Ribonuclease III family CNQ55_RS07680 SM00062 Bacterial periplasmic substrate-binding proteins CNQ55_RS07690 SM01211 CNQ55_RS07690 CNQ55_RS07695 SM00387 Histidine kinase-like ATPases CNQ55_RS07695 SM00388 His Kinase A (phosphoacceptor) domain CNQ55_RS07705 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS07705 SM00448 cheY-homologous receiver domain CNQ55_RS07710 SM00938 Nitrogen regulatory protein P-II CNQ55_RS07730 SM00028 Tetratricopeptide repeats CNQ55_RS07740 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS07750 SM00829 Enoylreductase CNQ55_RS07820 SM00271 DnaJ molecular chaperone homology domain CNQ55_RS07850 SM00450 Rhodanese Homology Domain CNQ55_RS07855 SM01359 CNQ55_RS07855 CNQ55_RS07855 SM01360 CNQ55_RS07855 CNQ55_RS07865 SM00562 CNQ55_RS07865 CNQ55_RS07875 SM00530 Helix-turn-helix XRE-family like proteins CNQ55_RS07895 SM00564 beta-propeller repeat CNQ55_RS07930 SM00116 Domain in cystathionine beta-synthase and other proteins. CNQ55_RS07930 SM01240 CNQ55_RS07930 CNQ55_RS07965 SM00052 Putative diguanylate phosphodiesterase CNQ55_RS07965 SM00267 diguanylate cyclase CNQ55_RS08035 SM01130 CNQ55_RS08035 CNQ55_RS08085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CNQ55_RS08085 SM00387 Histidine kinase-like ATPases CNQ55_RS08110 SM00861 Transketolase, pyrimidine binding domain CNQ55_RS08125 SM00919 Malic enzyme, NAD binding domain CNQ55_RS08125 SM01274 CNQ55_RS08125 CNQ55_RS08135 SM00877 CNQ55_RS08135 CNQ55_RS08160 SM00877 CNQ55_RS08160 CNQ55_RS08205 SM00877 CNQ55_RS08205 CNQ55_RS08210 SM00877 CNQ55_RS08210 CNQ55_RS08215 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS08225 SM00646 CNQ55_RS08225 CNQ55_RS08265 SM00822 CNQ55_RS08265 CNQ55_RS08285 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS08330 SM00771 ZipA, C-terminal domain (FtsZ-binding) CNQ55_RS08335 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CNQ55_RS08335 SM00292 breast cancer carboxy-terminal domain CNQ55_RS08335 SM00532 Ligase N family CNQ55_RS08425 SM00052 Putative diguanylate phosphodiesterase CNQ55_RS08425 SM00267 diguanylate cyclase CNQ55_RS08480 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS08485 SM00448 cheY-homologous receiver domain CNQ55_RS08485 SM00850 LytTr DNA-binding domain CNQ55_RS08490 SM00387 Histidine kinase-like ATPases CNQ55_RS08540 SM00062 Bacterial periplasmic substrate-binding proteins CNQ55_RS08540 SM00073 Histidine Phosphotransfer domain CNQ55_RS08540 SM00387 Histidine kinase-like ATPases CNQ55_RS08540 SM00388 His Kinase A (phosphoacceptor) domain CNQ55_RS08540 SM00448 cheY-homologous receiver domain CNQ55_RS08545 SM00421 helix_turn_helix, Lux Regulon CNQ55_RS08545 SM00448 cheY-homologous receiver domain CNQ55_RS08570 SM00354 helix_turn _helix lactose operon repressor CNQ55_RS08575 SM00640 Glycosyl hydrolases family 32 CNQ55_RS08685 SM00463 Small MutS-related domain CNQ55_RS08725 SM00825 Beta-ketoacyl synthase CNQ55_RS08750 SM00859 Semialdehyde dehydrogenase, NAD binding domain CNQ55_RS08795 SM00062 Bacterial periplasmic substrate-binding proteins CNQ55_RS08800 SM00062 Bacterial periplasmic substrate-binding proteins CNQ55_RS08815 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS08830 SM00905 Dihydroneopterin aldolase CNQ55_RS08890 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CNQ55_RS08930 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CNQ55_RS08935 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CNQ55_RS08935 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CNQ55_RS08990 SM00849 Metallo-beta-lactamase superfamily CNQ55_RS09025 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CNQ55_RS09090 SM00852 Probable molybdopterin binding domain CNQ55_RS09095 SM00346 helix_turn_helix isocitrate lyase regulation CNQ55_RS09100 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CNQ55_RS09170 SM00869 Autotransporter beta-domain CNQ55_RS09180 SM00434 DNA Topoisomerase IV CNQ55_RS09195 SM01359 CNQ55_RS09195 CNQ55_RS09195 SM01360 CNQ55_RS09195 CNQ55_RS09220 SM00882 Coenzyme A transferase CNQ55_RS09225 SM00882 Coenzyme A transferase CNQ55_RS09230 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS09230 SM00448 cheY-homologous receiver domain CNQ55_RS09235 SM00091 PAS domain CNQ55_RS09235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CNQ55_RS09235 SM00387 Histidine kinase-like ATPases CNQ55_RS09235 SM00388 His Kinase A (phosphoacceptor) domain CNQ55_RS09240 SM00387 Histidine kinase-like ATPases CNQ55_RS09240 SM00388 His Kinase A (phosphoacceptor) domain CNQ55_RS09240 SM00448 cheY-homologous receiver domain CNQ55_RS09245 SM00421 helix_turn_helix, Lux Regulon CNQ55_RS09245 SM00448 cheY-homologous receiver domain CNQ55_RS09250 SM00387 Histidine kinase-like ATPases CNQ55_RS09275 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS09285 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS09315 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CNQ55_RS09340 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS09380 SM00421 helix_turn_helix, Lux Regulon CNQ55_RS09380 SM00448 cheY-homologous receiver domain CNQ55_RS09415 SM00487 DEAD-like helicases superfamily CNQ55_RS09415 SM00490 helicase superfamily c-terminal domain CNQ55_RS09425 SM00363 S4 RNA-binding domain CNQ55_RS09445 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS09465 SM00052 Putative diguanylate phosphodiesterase CNQ55_RS09475 SM00014 Acid phosphatase homologues CNQ55_RS09480 SM00833 Cobalamin synthesis protein cobW C-terminal domain CNQ55_RS09490 SM00841 Elongation factor P, C-terminal CNQ55_RS09490 SM01185 CNQ55_RS09490 CNQ55_RS09540 SM00100 Cyclic nucleotide-monophosphate binding domain CNQ55_RS09560 SM00518 AP endonuclease family 2 CNQ55_RS09625 SM00354 helix_turn _helix lactose operon repressor CNQ55_RS09635 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS09730 SM01217 CNQ55_RS09730 CNQ55_RS09745 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS09760 SM00422 helix_turn_helix, mercury resistance CNQ55_RS09765 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CNQ55_RS09770 SM00448 cheY-homologous receiver domain CNQ55_RS09770 SM00850 LytTr DNA-binding domain CNQ55_RS09790 SM00327 von Willebrand factor (vWF) type A domain CNQ55_RS09800 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS09815 SM00773 Proposed nucleic acid binding domain CNQ55_RS09885 SM00641 Glycosyl hydrolases family 25 CNQ55_RS09890 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNQ55_RS09890 SM00866 CNQ55_RS09890 CNQ55_RS09910 SM01133 CNQ55_RS09910 CNQ55_RS09950 SM00420 helix_turn_helix, Deoxyribose operon repressor CNQ55_RS09950 SM01134 CNQ55_RS09950 CNQ55_RS09955 SM00046 Diacylglycerol kinase catalytic domain (presumed) CNQ55_RS09970 SM00530 Helix-turn-helix XRE-family like proteins CNQ55_RS10090 SM00954 Region found in RelA / SpoT proteins CNQ55_RS10215 SM00448 cheY-homologous receiver domain CNQ55_RS10215 SM00862 Transcriptional regulatory protein, C terminal CNQ55_RS10220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CNQ55_RS10220 SM00387 Histidine kinase-like ATPases CNQ55_RS10220 SM00388 His Kinase A (phosphoacceptor) domain CNQ55_RS10245 SM00327 von Willebrand factor (vWF) type A domain CNQ55_RS10265 SM00478 endonuclease III CNQ55_RS10265 SM01009 AlkA N-terminal domain CNQ55_RS10270 SM00052 Putative diguanylate phosphodiesterase CNQ55_RS10270 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CNQ55_RS10270 SM00091 PAS domain CNQ55_RS10270 SM00267 diguanylate cyclase CNQ55_RS10290 SM01091 Transporter associated domain CNQ55_RS10300 SM00226 Low molecular weight phosphatase family CNQ55_RS10450 SM01350 CNQ55_RS10450 CNQ55_RS10455 SM00984 UDP binding domain CNQ55_RS10540 SM00479 CNQ55_RS10540 CNQ55_RS10545 SM00936 Penicillin-binding protein 5, C-terminal domain CNQ55_RS10550 SM00871 Bacterial transcription activator, effector binding domain CNQ55_RS10660 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS10705 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS10795 SM00420 helix_turn_helix, Deoxyribose operon repressor CNQ55_RS10830 SM00470 ParB-like nuclease domain CNQ55_RS10905 SM00421 helix_turn_helix, Lux Regulon CNQ55_RS10915 SM00822 CNQ55_RS10915 CNQ55_RS10915 SM00823 Phosphopantetheine attachment site CNQ55_RS10915 SM00825 Beta-ketoacyl synthase CNQ55_RS10915 SM00826 CNQ55_RS10915 CNQ55_RS10915 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CNQ55_RS10915 SM00829 Enoylreductase CNQ55_RS10920 SM00823 Phosphopantetheine attachment site CNQ55_RS10920 SM00825 Beta-ketoacyl synthase CNQ55_RS10940 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CNQ55_RS10945 SM00823 Phosphopantetheine attachment site CNQ55_RS10950 SM00825 Beta-ketoacyl synthase CNQ55_RS10950 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CNQ55_RS10955 SM00823 Phosphopantetheine attachment site CNQ55_RS10960 SM00823 Phosphopantetheine attachment site CNQ55_RS10960 SM00825 Beta-ketoacyl synthase CNQ55_RS10980 SM00825 Beta-ketoacyl synthase CNQ55_RS11070 SM00634 Bacterial Ig-like domain (group 1) CNQ55_RS11110 SM00823 Phosphopantetheine attachment site CNQ55_RS11115 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS11120 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS11125 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS11180 SM00095 Transthyretin CNQ55_RS11185 SM00448 cheY-homologous receiver domain CNQ55_RS11185 SM00862 Transcriptional regulatory protein, C terminal CNQ55_RS11190 SM00387 Histidine kinase-like ATPases CNQ55_RS11190 SM00388 His Kinase A (phosphoacceptor) domain CNQ55_RS11215 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CNQ55_RS11250 SM00267 diguanylate cyclase CNQ55_RS11275 SM00421 helix_turn_helix, Lux Regulon CNQ55_RS11325 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS11370 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS11415 SM00642 Alpha-amylase domain CNQ55_RS11455 SM00062 Bacterial periplasmic substrate-binding proteins CNQ55_RS11455 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CNQ55_RS11470 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS11475 SM00421 helix_turn_helix, Lux Regulon CNQ55_RS11485 SM00421 helix_turn_helix, Lux Regulon CNQ55_RS11485 SM00448 cheY-homologous receiver domain CNQ55_RS11490 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CNQ55_RS11490 SM00465 GIY-YIG type nucleases (URI domain) CNQ55_RS11570 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS11615 SM00073 Histidine Phosphotransfer domain CNQ55_RS11615 SM00260 Two component signalling adaptor domain CNQ55_RS11615 SM00387 Histidine kinase-like ATPases CNQ55_RS11615 SM01231 CNQ55_RS11615 CNQ55_RS11620 SM00260 Two component signalling adaptor domain CNQ55_RS11625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CNQ55_RS11625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CNQ55_RS11625 SM00319 Homologues of the ligand binding domain of Tar CNQ55_RS11635 SM00138 Methyltransferase, chemotaxis proteins CNQ55_RS11640 SM00448 cheY-homologous receiver domain CNQ55_RS11645 SM00448 cheY-homologous receiver domain CNQ55_RS11670 SM00836 DALR anticodon binding domain CNQ55_RS11670 SM01016 Arginyl tRNA synthetase N terminal dom CNQ55_RS11755 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CNQ55_RS11760 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS11770 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS11780 SM00257 Lysin motif CNQ55_RS11840 SM00479 CNQ55_RS11840 CNQ55_RS11900 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CNQ55_RS11905 SM00945 ProQ/FINO family CNQ55_RS11910 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CNQ55_RS11910 SM00245 tail specific protease CNQ55_RS11925 SM00346 helix_turn_helix isocitrate lyase regulation CNQ55_RS11955 SM00357 Cold shock protein domain CNQ55_RS12005 SM01091 Transporter associated domain CNQ55_RS12010 SM00052 Putative diguanylate phosphodiesterase CNQ55_RS12045 SM00487 DEAD-like helicases superfamily CNQ55_RS12045 SM00491 CNQ55_RS12045 CNQ55_RS12065 SM00341 Helicase and RNase D C-terminal CNQ55_RS12065 SM00474 3'-5' exonuclease CNQ55_RS12105 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CNQ55_RS12105 SM00267 diguanylate cyclase CNQ55_RS12125 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS12145 SM00267 diguanylate cyclase CNQ55_RS12150 SM00267 diguanylate cyclase CNQ55_RS12160 SM00763 PrkA AAA domain CNQ55_RS12180 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CNQ55_RS12205 SM00829 Enoylreductase CNQ55_RS12225 SM00420 helix_turn_helix, Deoxyribose operon repressor CNQ55_RS12225 SM01134 CNQ55_RS12225 CNQ55_RS12240 SM00870 CNQ55_RS12240 CNQ55_RS12270 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CNQ55_RS12270 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CNQ55_RS12270 SM00493 CNQ55_RS12270 CNQ55_RS12280 SM00671 Sel1-like repeats. CNQ55_RS12285 SM00671 Sel1-like repeats. CNQ55_RS12290 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CNQ55_RS12310 SM00450 Rhodanese Homology Domain CNQ55_RS12315 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS12395 SM00465 GIY-YIG type nucleases (URI domain) CNQ55_RS12430 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS12445 SM01060 CNQ55_RS12445 CNQ55_RS12505 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CNQ55_RS12535 SM00873 B3/4 domain CNQ55_RS12535 SM00874 tRNA synthetase B5 domain CNQ55_RS12535 SM00896 Ferredoxin-fold anticodon binding domain CNQ55_RS12540 SM00411 bacterial (prokaryotic) histone like domain CNQ55_RS12555 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS12615 SM00893 Electron transfer flavoprotein domain CNQ55_RS12620 SM00893 Electron transfer flavoprotein domain CNQ55_RS12630 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS12640 SM00882 Coenzyme A transferase CNQ55_RS12705 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS12725 SM00257 Lysin motif CNQ55_RS12750 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain CNQ55_RS12825 SM00354 helix_turn _helix lactose operon repressor CNQ55_RS12870 SM00479 CNQ55_RS12870 CNQ55_RS12920 SM00347 helix_turn_helix multiple antibiotic resistance protein CNQ55_RS12945 SM00363 S4 RNA-binding domain CNQ55_RS12970 SM00478 endonuclease III CNQ55_RS12970 SM00525 CNQ55_RS12970 CNQ55_RS12980 SM00900 CNQ55_RS12980 CNQ55_RS13045 SM00354 helix_turn _helix lactose operon repressor CNQ55_RS13100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CNQ55_RS13100 SM00387 Histidine kinase-like ATPases CNQ55_RS13100 SM00388 His Kinase A (phosphoacceptor) domain CNQ55_RS13105 SM00448 cheY-homologous receiver domain CNQ55_RS13105 SM00862 Transcriptional regulatory protein, C terminal CNQ55_RS13135 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CNQ55_RS13135 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CNQ55_RS13250 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CNQ55_RS13275 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNQ55_RS13275 SM00895 CNQ55_RS13275 CNQ55_RS13305 SM00267 diguanylate cyclase CNQ55_RS13325 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNQ55_RS13325 SM00866 CNQ55_RS13325 CNQ55_RS13360 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS13365 SM00347 helix_turn_helix multiple antibiotic resistance protein CNQ55_RS13410 SM00267 diguanylate cyclase CNQ55_RS13440 SM00530 Helix-turn-helix XRE-family like proteins CNQ55_RS13485 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS13540 SM00052 Putative diguanylate phosphodiesterase CNQ55_RS13540 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CNQ55_RS13540 SM00091 PAS domain CNQ55_RS13540 SM00267 diguanylate cyclase CNQ55_RS13565 SM00919 Malic enzyme, NAD binding domain CNQ55_RS13565 SM01274 CNQ55_RS13565 CNQ55_RS13570 SM00829 Enoylreductase CNQ55_RS13580 SM00530 Helix-turn-helix XRE-family like proteins CNQ55_RS13610 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CNQ55_RS13640 SM00903 Flavin reductase like domain CNQ55_RS13670 SM01351 CNQ55_RS13670 CNQ55_RS13775 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS13785 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNQ55_RS13805 SM00530 Helix-turn-helix XRE-family like proteins CNQ55_RS13860 SM01150 CNQ55_RS13860 CNQ55_RS13890 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CNQ55_RS13905 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS13905 SM00487 DEAD-like helicases superfamily CNQ55_RS13905 SM00490 helicase superfamily c-terminal domain CNQ55_RS13905 SM00847 Helicase associated domain (HA2) Add an annotation CNQ55_RS13940 SM00710 Parallel beta-helix repeats CNQ55_RS13975 SM00890 Domain of unknown function CNQ55_RS14015 SM00487 DEAD-like helicases superfamily CNQ55_RS14015 SM00490 helicase superfamily c-terminal domain CNQ55_RS14030 SM00091 PAS domain CNQ55_RS14030 SM00267 diguanylate cyclase CNQ55_RS14035 SM00463 Small MutS-related domain CNQ55_RS14050 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS14070 SM00100 Cyclic nucleotide-monophosphate binding domain CNQ55_RS14070 SM00419 helix_turn_helix, cAMP Regulatory protein CNQ55_RS14115 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CNQ55_RS14125 SM00091 PAS domain CNQ55_RS14125 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS14140 SM00354 helix_turn _helix lactose operon repressor CNQ55_RS14195 SM00642 Alpha-amylase domain CNQ55_RS14200 SM00450 Rhodanese Homology Domain CNQ55_RS14225 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS14255 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS14260 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS14300 SM00357 Cold shock protein domain CNQ55_RS14300 SM00955 CNQ55_RS14300 CNQ55_RS14310 SM00052 Putative diguanylate phosphodiesterase CNQ55_RS14310 SM00091 PAS domain CNQ55_RS14310 SM00267 diguanylate cyclase CNQ55_RS14320 SM00420 helix_turn_helix, Deoxyribose operon repressor CNQ55_RS14320 SM01134 CNQ55_RS14320 CNQ55_RS14335 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CNQ55_RS14340 SM00028 Tetratricopeptide repeats CNQ55_RS14350 SM00014 Acid phosphatase homologues CNQ55_RS14390 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CNQ55_RS14390 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CNQ55_RS14390 SM00493 CNQ55_RS14390 CNQ55_RS14410 SM00822 CNQ55_RS14410 CNQ55_RS14430 SM00363 S4 RNA-binding domain CNQ55_RS14445 SM00481 DNA polymerase alpha chain like domain CNQ55_RS14540 SM00155 Phospholipase D. Active site motifs. CNQ55_RS14550 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS14555 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS14600 SM00528 Domain in histone-like proteins of HNS family CNQ55_RS14610 SM00448 cheY-homologous receiver domain CNQ55_RS14660 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CNQ55_RS14675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CNQ55_RS14675 SM00387 Histidine kinase-like ATPases CNQ55_RS14680 SM00421 helix_turn_helix, Lux Regulon CNQ55_RS14680 SM00448 cheY-homologous receiver domain CNQ55_RS14740 SM00937 CNQ55_RS14740 CNQ55_RS14760 SM01400 CNQ55_RS14760 CNQ55_RS14790 SM00091 PAS domain CNQ55_RS14790 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS14800 SM01120 CNQ55_RS14800 CNQ55_RS14830 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS14875 SM01091 Transporter associated domain CNQ55_RS14880 SM01005 Alanine racemase, C-terminal domain CNQ55_RS14895 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNQ55_RS15060 SM00052 Putative diguanylate phosphodiesterase CNQ55_RS15060 SM01034 Sensors of blue-light using FAD CNQ55_RS15065 SM00422 helix_turn_helix, mercury resistance CNQ55_RS15090 SM00530 Helix-turn-helix XRE-family like proteins CNQ55_RS15105 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS15145 SM00232 JAB/MPN domain CNQ55_RS15175 SM00635 Bacterial Ig-like domain 2 CNQ55_RS15340 SM00530 Helix-turn-helix XRE-family like proteins CNQ55_RS15415 SM01329 CNQ55_RS15415 CNQ55_RS15445 SM00448 cheY-homologous receiver domain CNQ55_RS15445 SM00862 Transcriptional regulatory protein, C terminal CNQ55_RS15450 SM00387 Histidine kinase-like ATPases CNQ55_RS15455 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CNQ55_RS15470 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS15515 SM00232 JAB/MPN domain CNQ55_RS15550 SM00635 Bacterial Ig-like domain 2 CNQ55_RS15695 SM00507 HNH nucleases CNQ55_RS15845 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS15860 SM00487 DEAD-like helicases superfamily CNQ55_RS15860 SM00490 helicase superfamily c-terminal domain CNQ55_RS15860 SM00982 CNQ55_RS15860 CNQ55_RS15860 SM01058 CarD-like/TRCF domain CNQ55_RS15865 SM00257 Lysin motif CNQ55_RS15960 SM00825 Beta-ketoacyl synthase CNQ55_RS15970 SM00822 CNQ55_RS15970 CNQ55_RS15975 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CNQ55_RS16005 SM00363 S4 RNA-binding domain CNQ55_RS16015 SM00316 Ribosomal protein S1-like RNA-binding domain CNQ55_RS16030 SM00047 Lysozyme subfamily 2 CNQ55_RS16075 SM00858 CNQ55_RS16075 CNQ55_RS16155 SM00867 YceI-like domain CNQ55_RS16160 SM00450 Rhodanese Homology Domain CNQ55_RS16210 SM00155 Phospholipase D. Active site motifs. CNQ55_RS16215 SM00506 Appr-1"-p processing enzyme CNQ55_RS16250 SM00421 helix_turn_helix, Lux Regulon CNQ55_RS16280 SM00481 DNA polymerase alpha chain like domain CNQ55_RS16295 SM00267 diguanylate cyclase CNQ55_RS16300 SM00028 Tetratricopeptide repeats CNQ55_RS16395 SM00903 Flavin reductase like domain CNQ55_RS16430 SM00271 DnaJ molecular chaperone homology domain CNQ55_RS16455 SM00448 cheY-homologous receiver domain CNQ55_RS16455 SM00862 Transcriptional regulatory protein, C terminal CNQ55_RS16490 SM00357 Cold shock protein domain CNQ55_RS16495 SM00357 Cold shock protein domain CNQ55_RS16570 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CNQ55_RS16575 SM00992 Hemimethylated DNA-binding protein YccV like CNQ55_RS16580 SM00881 CoA binding domain CNQ55_RS16590 SM00851 MGS-like domain CNQ55_RS16665 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS16670 SM00981 CNQ55_RS16670 CNQ55_RS16700 SM00062 Bacterial periplasmic substrate-binding proteins CNQ55_RS16715 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS16750 SM00849 Metallo-beta-lactamase superfamily CNQ55_RS16820 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS16825 SM00849 Metallo-beta-lactamase superfamily CNQ55_RS16830 SM00411 bacterial (prokaryotic) histone like domain CNQ55_RS16835 SM00316 Ribosomal protein S1-like RNA-binding domain CNQ55_RS16905 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CNQ55_RS16915 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS16925 SM00843 CNQ55_RS16925 CNQ55_RS16930 SM00344 helix_turn_helix ASNC type CNQ55_RS16945 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS16950 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS16965 SM00316 Ribosomal protein S1-like RNA-binding domain CNQ55_RS16975 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS16975 SM01086 C-terminal, D2-small domain, of ClpB protein CNQ55_RS16985 SM00357 Cold shock protein domain CNQ55_RS16990 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS17055 SM00644 CNQ55_RS17055 CNQ55_RS17070 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS17075 SM00062 Bacterial periplasmic substrate-binding proteins CNQ55_RS17075 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CNQ55_RS17090 SM00062 Bacterial periplasmic substrate-binding proteins CNQ55_RS17090 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CNQ55_RS17115 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS17190 SM00014 Acid phosphatase homologues CNQ55_RS17195 SM00420 helix_turn_helix, Deoxyribose operon repressor CNQ55_RS17195 SM01134 CNQ55_RS17195 CNQ55_RS17200 SM00936 Penicillin-binding protein 5, C-terminal domain CNQ55_RS17220 SM00729 Elongator protein 3, MiaB family, Radical SAM CNQ55_RS17225 SM00267 diguanylate cyclase CNQ55_RS17230 SM00052 Putative diguanylate phosphodiesterase CNQ55_RS17250 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS17260 SM00852 Probable molybdopterin binding domain CNQ55_RS17290 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS17305 SM00529 Helix-turn-helix diphteria tox regulatory element CNQ55_RS17350 SM00062 Bacterial periplasmic substrate-binding proteins CNQ55_RS17350 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CNQ55_RS17360 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS17385 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CNQ55_RS17410 SM00487 DEAD-like helicases superfamily CNQ55_RS17410 SM00488 CNQ55_RS17410 CNQ55_RS17410 SM00491 CNQ55_RS17410 CNQ55_RS17420 SM00487 DEAD-like helicases superfamily CNQ55_RS17420 SM00490 helicase superfamily c-terminal domain CNQ55_RS17435 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS17460 SM00155 Phospholipase D. Active site motifs. CNQ55_RS17495 SM00852 Probable molybdopterin binding domain CNQ55_RS17500 SM00729 Elongator protein 3, MiaB family, Radical SAM CNQ55_RS17510 SM00487 DEAD-like helicases superfamily CNQ55_RS17510 SM00490 helicase superfamily c-terminal domain CNQ55_RS17530 SM00729 Elongator protein 3, MiaB family, Radical SAM CNQ55_RS17530 SM00876 Biotin and Thiamin Synthesis associated domain CNQ55_RS17635 SM01252 CNQ55_RS17635 CNQ55_RS17745 SM00530 Helix-turn-helix XRE-family like proteins CNQ55_RS17900 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS17935 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS17960 SM00855 Phosphoglycerate mutase family CNQ55_RS18090 SM00028 Tetratricopeptide repeats CNQ55_RS18095 SM00881 CoA binding domain CNQ55_RS18110 SM00861 Transketolase, pyrimidine binding domain CNQ55_RS18160 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CNQ55_RS18160 SM01232 CNQ55_RS18160 CNQ55_RS18170 SM00797 Allophanate hydrolase subunit 2 CNQ55_RS18175 SM00796 Allophanate hydrolase subunit 1 CNQ55_RS18225 SM00387 Histidine kinase-like ATPases CNQ55_RS18225 SM00388 His Kinase A (phosphoacceptor) domain CNQ55_RS18230 SM00448 cheY-homologous receiver domain CNQ55_RS18230 SM00862 Transcriptional regulatory protein, C terminal CNQ55_RS18300 SM00420 helix_turn_helix, Deoxyribose operon repressor CNQ55_RS18300 SM01134 CNQ55_RS18300 CNQ55_RS18320 SM01130 CNQ55_RS18320 CNQ55_RS18425 SM00729 Elongator protein 3, MiaB family, Radical SAM CNQ55_RS18440 SM00116 Domain in cystathionine beta-synthase and other proteins. CNQ55_RS18440 SM01091 Transporter associated domain CNQ55_RS18455 SM00062 Bacterial periplasmic substrate-binding proteins CNQ55_RS18470 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS18505 SM00855 Phosphoglycerate mutase family CNQ55_RS18535 SM00936 Penicillin-binding protein 5, C-terminal domain CNQ55_RS18565 SM00729 Elongator protein 3, MiaB family, Radical SAM CNQ55_RS18585 SM00357 Cold shock protein domain CNQ55_RS18605 SM00448 cheY-homologous receiver domain CNQ55_RS18610 SM00091 PAS domain CNQ55_RS18610 SM00387 Histidine kinase-like ATPases CNQ55_RS18615 SM00764 Citrate lyase ligase C-terminal domain CNQ55_RS18695 SM00470 ParB-like nuclease domain CNQ55_RS18725 SM00822 CNQ55_RS18725 CNQ55_RS18765 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS18775 SM00823 Phosphopantetheine attachment site CNQ55_RS18775 SM00824 Thioesterase CNQ55_RS18780 SM00923 MbtH-like protein CNQ55_RS18870 SM00448 cheY-homologous receiver domain CNQ55_RS18870 SM00862 Transcriptional regulatory protein, C terminal CNQ55_RS18875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CNQ55_RS18875 SM00387 Histidine kinase-like ATPases CNQ55_RS18875 SM00388 His Kinase A (phosphoacceptor) domain CNQ55_RS18885 SM00028 Tetratricopeptide repeats CNQ55_RS18945 SM00840 CNQ55_RS18945 CNQ55_RS18970 SM01001 AIR carboxylase CNQ55_RS19050 SM00346 helix_turn_helix isocitrate lyase regulation CNQ55_RS19065 SM00450 Rhodanese Homology Domain CNQ55_RS19075 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS19085 SM00822 CNQ55_RS19085 CNQ55_RS19100 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS19105 SM00244 prohibitin homologues CNQ55_RS19120 SM00422 helix_turn_helix, mercury resistance CNQ55_RS19140 SM00530 Helix-turn-helix XRE-family like proteins CNQ55_RS19220 SM00387 Histidine kinase-like ATPases CNQ55_RS19225 SM00493 CNQ55_RS19225 CNQ55_RS19235 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS19300 SM01266 CNQ55_RS19300 CNQ55_RS19310 SM00052 Putative diguanylate phosphodiesterase CNQ55_RS19345 SM00938 Nitrogen regulatory protein P-II CNQ55_RS19350 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS19355 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS19360 SM00344 helix_turn_helix ASNC type CNQ55_RS19385 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CNQ55_RS19395 SM00411 bacterial (prokaryotic) histone like domain CNQ55_RS19400 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS19400 SM00464 Found in ATP-dependent protease La (LON) CNQ55_RS19405 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS19405 SM00994 ClpX C4-type zinc finger CNQ55_RS19405 SM01086 C-terminal, D2-small domain, of ClpB protein CNQ55_RS19490 SM00981 CNQ55_RS19490 CNQ55_RS19505 SM00861 Transketolase, pyrimidine binding domain CNQ55_RS19555 SM00507 HNH nucleases CNQ55_RS19570 SM01323 CNQ55_RS19570 CNQ55_RS19590 SM00642 Alpha-amylase domain CNQ55_RS19605 SM00091 PAS domain CNQ55_RS19605 SM00387 Histidine kinase-like ATPases CNQ55_RS19605 SM00388 His Kinase A (phosphoacceptor) domain CNQ55_RS19610 SM00448 cheY-homologous receiver domain CNQ55_RS19610 SM00862 Transcriptional regulatory protein, C terminal CNQ55_RS19685 SM00267 diguanylate cyclase CNQ55_RS19695 SM00098 Alkaline phosphatase homologues CNQ55_RS19745 SM00869 Autotransporter beta-domain CNQ55_RS19750 SM01004 Delta-aminolevulinic acid dehydratase CNQ55_RS19765 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS19770 SM00062 Bacterial periplasmic substrate-binding proteins CNQ55_RS19805 SM00829 Enoylreductase CNQ55_RS19825 SM00354 helix_turn _helix lactose operon repressor CNQ55_RS19835 SM01038 Beta galactosidase small chain CNQ55_RS19845 SM01266 CNQ55_RS19845 CNQ55_RS19890 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS19910 SM00829 Enoylreductase CNQ55_RS19940 SM00248 ankyrin repeats CNQ55_RS19960 SM00052 Putative diguanylate phosphodiesterase CNQ55_RS19960 SM00421 helix_turn_helix, Lux Regulon CNQ55_RS20010 SM00421 helix_turn_helix, Lux Regulon CNQ55_RS20025 SM00869 Autotransporter beta-domain CNQ55_RS20060 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS20085 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS20085 SM00871 Bacterial transcription activator, effector binding domain CNQ55_RS20090 SM00634 Bacterial Ig-like domain (group 1) CNQ55_RS20155 SM00421 helix_turn_helix, Lux Regulon CNQ55_RS20215 SM00869 Autotransporter beta-domain CNQ55_RS20220 SM00347 helix_turn_helix multiple antibiotic resistance protein CNQ55_RS20285 SM00869 Autotransporter beta-domain CNQ55_RS20320 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS20355 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS20375 SM00833 Cobalamin synthesis protein cobW C-terminal domain CNQ55_RS20435 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS20455 SM00347 helix_turn_helix multiple antibiotic resistance protein CNQ55_RS20465 SM00052 Putative diguanylate phosphodiesterase CNQ55_RS20645 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CNQ55_RS20715 SM01321 CNQ55_RS20715 CNQ55_RS20845 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS20845 SM01086 C-terminal, D2-small domain, of ClpB protein CNQ55_RS20885 SM00479 CNQ55_RS20885 CNQ55_RS20900 SM00849 Metallo-beta-lactamase superfamily CNQ55_RS20905 SM00257 Lysin motif CNQ55_RS20965 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS20965 SM00930 CNQ55_RS20965 CNQ55_RS21010 SM01322 CNQ55_RS21010 CNQ55_RS21025 SM00977 TilS substrate C-terminal domain CNQ55_RS21045 SM00481 DNA polymerase alpha chain like domain CNQ55_RS21075 SM00935 Outer membrane protein (OmpH-like) CNQ55_RS21085 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CNQ55_RS21135 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CNQ55_RS21155 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CNQ55_RS21165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CNQ55_RS21210 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS21225 SM00487 DEAD-like helicases superfamily CNQ55_RS21225 SM00490 helicase superfamily c-terminal domain CNQ55_RS21225 SM00847 Helicase associated domain (HA2) Add an annotation CNQ55_RS21345 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS21350 SM00947 Carbonic anhydrase CNQ55_RS21360 SM00564 beta-propeller repeat CNQ55_RS21430 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNQ55_RS21430 SM00895 CNQ55_RS21430 CNQ55_RS21475 SM00644 CNQ55_RS21475 CNQ55_RS21505 SM01240 CNQ55_RS21505 CNQ55_RS21530 SM00957 SecA DEAD-like domain CNQ55_RS21530 SM00958 SecA preprotein cross-linking domain CNQ55_RS21545 SM00864 Tubulin/FtsZ family, GTPase domain CNQ55_RS21545 SM00865 Tubulin/FtsZ family, C-terminal domain CNQ55_RS21550 SM00842 Cell division protein FtsA CNQ55_RS21625 SM00354 helix_turn _helix lactose operon repressor CNQ55_RS21655 SM00917 LeuA allosteric (dimerisation) domain CNQ55_RS21660 SM01329 CNQ55_RS21660 CNQ55_RS21695 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS21715 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS21735 SM01007 Class II Aldolase and Adducin N-terminal domain CNQ55_RS21740 SM00486 DNA polymerase type-B family CNQ55_RS21745 SM00487 DEAD-like helicases superfamily CNQ55_RS21745 SM00490 helicase superfamily c-terminal domain CNQ55_RS21755 SM00271 DnaJ molecular chaperone homology domain CNQ55_RS21775 SM00650 Ribosomal RNA adenine dimethylases CNQ55_RS21830 SM00893 Electron transfer flavoprotein domain CNQ55_RS21835 SM00893 Electron transfer flavoprotein domain CNQ55_RS21880 SM00851 MGS-like domain CNQ55_RS21880 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CNQ55_RS21885 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CNQ55_RS21925 SM00904 Riboflavin kinase CNQ55_RS21975 SM00271 DnaJ molecular chaperone homology domain CNQ55_RS22000 SM00852 Probable molybdopterin binding domain CNQ55_RS22060 SM00448 cheY-homologous receiver domain CNQ55_RS22060 SM00862 Transcriptional regulatory protein, C terminal CNQ55_RS22070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CNQ55_RS22070 SM00387 Histidine kinase-like ATPases CNQ55_RS22070 SM00388 His Kinase A (phosphoacceptor) domain CNQ55_RS22075 SM00448 cheY-homologous receiver domain CNQ55_RS22075 SM00862 Transcriptional regulatory protein, C terminal CNQ55_RS22085 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS22085 SM00871 Bacterial transcription activator, effector binding domain CNQ55_RS22090 SM00855 Phosphoglycerate mutase family CNQ55_RS22110 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS22115 SM00530 Helix-turn-helix XRE-family like proteins CNQ55_RS22125 SM00530 Helix-turn-helix XRE-family like proteins CNQ55_RS22130 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS22150 SM00530 Helix-turn-helix XRE-family like proteins CNQ55_RS22165 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CNQ55_RS22170 SM01133 CNQ55_RS22170 CNQ55_RS22200 SM00749 bacterial OsmY and nodulation domain CNQ55_RS22255 SM00421 helix_turn_helix, Lux Regulon CNQ55_RS22260 SM00421 helix_turn_helix, Lux Regulon CNQ55_RS22280 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS22295 SM00829 Enoylreductase CNQ55_RS22300 SM00895 CNQ55_RS22300 CNQ55_RS22325 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CNQ55_RS22325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CNQ55_RS22325 SM00319 Homologues of the ligand binding domain of Tar CNQ55_RS22345 SM00833 Cobalamin synthesis protein cobW C-terminal domain CNQ55_RS22355 SM00487 DEAD-like helicases superfamily CNQ55_RS22460 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNQ55_RS22460 SM00895 CNQ55_RS22460 CNQ55_RS22710 SM00528 Domain in histone-like proteins of HNS family CNQ55_RS22720 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CNQ55_RS22740 SM00530 Helix-turn-helix XRE-family like proteins CNQ55_RS22760 SM00487 DEAD-like helicases superfamily CNQ55_RS22815 SM00829 Enoylreductase CNQ55_RS22845 SM00354 helix_turn _helix lactose operon repressor CNQ55_RS22950 SM00831 Cation transporter/ATPase, N-terminus CNQ55_RS22955 SM00354 helix_turn _helix lactose operon repressor CNQ55_RS22965 SM00642 Alpha-amylase domain CNQ55_RS23015 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS23050 SM01091 Transporter associated domain CNQ55_RS23135 SM00882 Coenzyme A transferase CNQ55_RS23160 SM00530 Helix-turn-helix XRE-family like proteins CNQ55_RS23195 SM01007 Class II Aldolase and Adducin N-terminal domain CNQ55_RS23205 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CNQ55_RS23230 SM00420 helix_turn_helix, Deoxyribose operon repressor CNQ55_RS23230 SM01134 CNQ55_RS23230 CNQ55_RS23295 SM00967 RNA 2'-O ribose methyltransferase substrate binding CNQ55_RS23300 SM00316 Ribosomal protein S1-like RNA-binding domain CNQ55_RS23300 SM00357 Cold shock protein domain CNQ55_RS23300 SM00955 CNQ55_RS23300 CNQ55_RS23310 SM00788 Adenylosuccinate synthetase CNQ55_RS23320 SM00244 prohibitin homologues CNQ55_RS23325 SM00244 prohibitin homologues CNQ55_RS23345 SM00853 MutL C terminal dimerisation domain CNQ55_RS23345 SM01340 CNQ55_RS23345 CNQ55_RS23350 SM00646 CNQ55_RS23350 CNQ55_RS23385 SM00479 CNQ55_RS23385 CNQ55_RS23465 SM00841 Elongation factor P, C-terminal CNQ55_RS23465 SM01185 CNQ55_RS23465 CNQ55_RS23490 SM00883 Chaperonin 10 Kd subunit CNQ55_RS23540 SM00028 Tetratricopeptide repeats CNQ55_RS23610 SM00347 helix_turn_helix multiple antibiotic resistance protein CNQ55_RS23680 SM00850 LytTr DNA-binding domain CNQ55_RS23710 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS23820 SM00869 Autotransporter beta-domain CNQ55_RS23900 SM00862 Transcriptional regulatory protein, C terminal CNQ55_RS23950 SM00091 PAS domain CNQ55_RS23950 SM00387 Histidine kinase-like ATPases CNQ55_RS23955 SM00448 cheY-homologous receiver domain CNQ55_RS23990 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS24000 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS24015 SM00448 cheY-homologous receiver domain CNQ55_RS24015 SM00862 Transcriptional regulatory protein, C terminal CNQ55_RS24020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CNQ55_RS24020 SM00387 Histidine kinase-like ATPases CNQ55_RS24020 SM00388 His Kinase A (phosphoacceptor) domain CNQ55_RS24060 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS24075 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNQ55_RS24075 SM00866 CNQ55_RS24075 CNQ55_RS24100 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS24105 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS24115 SM00072 Guanylate kinase homologues. CNQ55_RS24155 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS24175 SM00849 Metallo-beta-lactamase superfamily CNQ55_RS24220 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS24225 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS24230 SM00671 Sel1-like repeats. CNQ55_RS24245 SM00028 Tetratricopeptide repeats CNQ55_RS24345 SM00422 helix_turn_helix, mercury resistance CNQ55_RS24350 SM00342 helix_turn_helix, arabinose operon control protein CNQ55_RS24355 SM00052 Putative diguanylate phosphodiesterase CNQ55_RS24395 SM00387 Histidine kinase-like ATPases CNQ55_RS24400 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS24400 SM00448 cheY-homologous receiver domain CNQ55_RS24415 SM00881 CoA binding domain CNQ55_RS24435 SM00861 Transketolase, pyrimidine binding domain CNQ55_RS24455 SM01005 Alanine racemase, C-terminal domain CNQ55_RS24465 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS24470 SM00829 Enoylreductase CNQ55_RS24510 SM00563 Phosphate acyltransferases CNQ55_RS24540 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS24620 SM00363 S4 RNA-binding domain CNQ55_RS24630 SM00822 CNQ55_RS24630 CNQ55_RS24685 SM01018 B12 binding domain CNQ55_RS24690 SM00346 helix_turn_helix isocitrate lyase regulation CNQ55_RS24790 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CNQ55_RS24835 SM00346 helix_turn_helix isocitrate lyase regulation CNQ55_RS24920 SM00861 Transketolase, pyrimidine binding domain CNQ55_RS24985 SM00341 Helicase and RNase D C-terminal CNQ55_RS24985 SM00487 DEAD-like helicases superfamily CNQ55_RS24985 SM00490 helicase superfamily c-terminal domain CNQ55_RS24985 SM00956 CNQ55_RS24985 CNQ55_RS25065 SM01219 CNQ55_RS25065 CNQ55_RS25175 SM00984 UDP binding domain CNQ55_RS25200 SM00357 Cold shock protein domain CNQ55_RS25200 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS25200 SM00959 Rho termination factor, N-terminal domain CNQ55_RS25215 SM00487 DEAD-like helicases superfamily CNQ55_RS25215 SM00490 helicase superfamily c-terminal domain CNQ55_RS25285 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS25335 SM00798 AICARFT/IMPCHase bienzyme CNQ55_RS25335 SM00851 MGS-like domain CNQ55_RS25340 SM01209 CNQ55_RS25340 CNQ55_RS25340 SM01210 CNQ55_RS25340 CNQ55_RS25345 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS25345 SM00448 cheY-homologous receiver domain CNQ55_RS25350 SM00387 Histidine kinase-like ATPases CNQ55_RS25350 SM00388 His Kinase A (phosphoacceptor) domain CNQ55_RS25370 SM00411 bacterial (prokaryotic) histone like domain CNQ55_RS25425 SM00876 Biotin and Thiamin Synthesis associated domain CNQ55_RS25430 SM00663 RNA polymerase I subunit A N-terminus CNQ55_RS25460 SM00649 Ribosomal protein L11/L12 CNQ55_RS25465 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CNQ55_RS25465 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CNQ55_RS25545 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNQ55_RS25545 SM00895 CNQ55_RS25545 CNQ55_RS25555 SM00354 helix_turn _helix lactose operon repressor CNQ55_RS25575 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS25590 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS25595 SM00327 von Willebrand factor (vWF) type A domain CNQ55_RS25605 SM00344 helix_turn_helix ASNC type CNQ55_RS25705 SM00470 ParB-like nuclease domain CNQ55_RS25970 SM00945 ProQ/FINO family CNQ55_RS26000 SM00857 Resolvase, N terminal domain CNQ55_RS26050 SM00382 ATPases associated with a variety of cellular activities CNQ55_RS26135 SM00470 ParB-like nuclease domain CNQ55_RS26145 SM00421 helix_turn_helix, Lux Regulon CNQ55_RS26160 SM00869 Autotransporter beta-domain CNQ55_RS26200 SM00966 SpoVT / AbrB like domain