locus-tag class description JR895_RS00005 PF00308 Bacterial dnaA protein JR895_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix JR895_RS00005 PF11638 DnaA N-terminal domain JR895_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JR895_RS00010 PF02767 DNA polymerase III beta subunit, central domain JR895_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JR895_RS00015 PF02463 RecF/RecN/SMC N terminal domain JR895_RS00020 PF00204 DNA gyrase B JR895_RS00020 PF18053 DNA gyrase B subunit insert domain JR895_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus JR895_RS00020 PF01751 Toprim domain JR895_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS00025 PF06078 Bacterial protein of unknown function (DUF937) JR895_RS00040 PF07729 FCD domain JR895_RS00040 PF00392 Bacterial regulatory proteins, gntR family JR895_RS00045 PF05035 2-keto-3-deoxy-galactonokinase JR895_RS00050 PF01081 KDPG and KHG aldolase JR895_RS00055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JR895_RS00055 PF13378 Enolase C-terminal domain-like JR895_RS00060 PF07690 Major Facilitator Superfamily JR895_RS00065 PF01494 FAD binding domain JR895_RS00070 PF07676 WD40-like Beta Propeller Repeat JR895_RS00070 PF12566 Protein of unknown function (DUF3748) JR895_RS00075 PF07119 Protein of unknown function (DUF1375) JR895_RS00080 PF00011 Hsp20/alpha crystallin family JR895_RS00085 PF00011 Hsp20/alpha crystallin family JR895_RS00090 PF06826 Predicted Permease Membrane Region JR895_RS00090 PF02080 TrkA-C domain JR895_RS00095 PF07702 UTRA domain JR895_RS00095 PF00392 Bacterial regulatory proteins, gntR family JR895_RS00100 PF00367 phosphotransferase system, EIIB JR895_RS00100 PF02378 Phosphotransferase system, EIIC JR895_RS00110 PF12833 Helix-turn-helix domain JR895_RS00110 PF02311 AraC-like ligand binding domain JR895_RS00115 PF00474 Sodium:solute symporter family JR895_RS00120 PF16347 Domain of unknown function (DUF4976) JR895_RS00120 PF00884 Sulfatase JR895_RS00130 PF02656 Domain of unknown function (DUF202) JR895_RS00135 PF02656 Domain of unknown function (DUF202) JR895_RS00145 PF07690 Major Facilitator Superfamily JR895_RS00150 PF13939 Toxin TisB, type I toxin-antitoxin system JR895_RS00160 PF08049 IlvB leader peptide JR895_RS00165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JR895_RS00165 PF00205 Thiamine pyrophosphate enzyme, central domain JR895_RS00165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JR895_RS00170 PF01842 ACT domain JR895_RS00175 PF00196 Bacterial regulatory proteins, luxR family JR895_RS00175 PF00072 Response regulator receiver domain JR895_RS00180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS00180 PF05231 MASE1 JR895_RS00180 PF07730 Histidine kinase JR895_RS00185 PF07690 Major Facilitator Superfamily JR895_RS00190 PF07690 Major Facilitator Superfamily JR895_RS00195 PF01979 Amidohydrolase family JR895_RS00195 PF13382 Adenine deaminase C-terminal domain JR895_RS00200 PF00860 Permease family JR895_RS00205 PF06711 Protein of unknown function (DUF1198) JR895_RS00210 PF07690 Major Facilitator Superfamily JR895_RS00220 PF03180 NLPA lipoprotein JR895_RS00225 PF00892 EamA-like transporter family JR895_RS00230 PF07690 Major Facilitator Superfamily JR895_RS00250 PF06755 CbtA_toxin of type IV toxin-antitoxin system JR895_RS00255 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A JR895_RS00265 PF04002 RadC-like JAB domain JR895_RS00295 PF13286 Phosphohydrolase-associated domain JR895_RS00295 PF01966 HD domain JR895_RS00305 PF05717 IS66 Orf2 like protein JR895_RS00310 PF13007 Transposase C of IS166 homeodomain JR895_RS00310 PF13817 IS66 C-terminal element JR895_RS00310 PF03050 Transposase IS66 family JR895_RS00310 PF13005 zinc-finger binding domain of transposase IS66 JR895_RS00315 PF05717 IS66 Orf2 like protein JR895_RS00335 PF03797 Autotransporter beta-domain JR895_RS00345 PF14659 Phage integrase, N-terminal SAM-like domain JR895_RS00345 PF13356 Arm DNA-binding domain JR895_RS00345 PF00589 Phage integrase family JR895_RS00360 PF13802 Galactose mutarotase-like JR895_RS00360 PF01055 Glycosyl hydrolases family 31 JR895_RS00365 PF05170 AsmA family JR895_RS00370 PF00860 Permease family JR895_RS00375 PF03616 Sodium/glutamate symporter JR895_RS00380 PF17191 RecG wedge domain JR895_RS00380 PF00271 Helicase conserved C-terminal domain JR895_RS00380 PF00270 DEAD/DEAH box helicase JR895_RS00385 PF12105 SpoU, rRNA methylase, C-terminal JR895_RS00385 PF00588 SpoU rRNA Methylase family JR895_RS00390 PF13291 ACT domain JR895_RS00390 PF04607 Region found in RelA / SpoT proteins JR895_RS00390 PF02824 TGS domain JR895_RS00395 PF01192 RNA polymerase Rpb6 JR895_RS00400 PF00625 Guanylate kinase JR895_RS00405 PF03120 NAD-dependent DNA ligase OB-fold domain JR895_RS00405 PF01653 NAD-dependent DNA ligase adenylation domain JR895_RS00410 PF03458 UPF0126 domain JR895_RS00420 PF08340 Domain of unknown function (DUF1732) JR895_RS00420 PF03755 YicC-like family, N-terminal region JR895_RS00425 PF03725 3' exoribonuclease family, domain 2 JR895_RS00425 PF01138 3' exoribonuclease family, domain 1 JR895_RS00430 PF00156 Phosphoribosyl transferase domain JR895_RS00435 PF00440 Bacterial regulatory proteins, tetR family JR895_RS00440 PF00692 dUTPase JR895_RS00445 PF02441 Flavoprotein JR895_RS00445 PF04127 DNA / pantothenate metabolism flavoprotein JR895_RS00450 PF04002 RadC-like JAB domain JR895_RS00455 PF00830 Ribosomal L28 family JR895_RS00460 PF00471 Ribosomal protein L33 JR895_RS00465 PF06827 Zinc finger found in FPG and IleRS JR895_RS00465 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JR895_RS00465 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JR895_RS00470 PF01467 Cytidylyltransferase-like JR895_RS00475 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JR895_RS00480 PF13936 Helix-turn-helix domain JR895_RS00480 PF00665 Integrase core domain JR895_RS00485 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JR895_RS00490 PF00534 Glycosyl transferases group 1 JR895_RS00490 PF13439 Glycosyltransferase Family 4 JR895_RS00500 PF01501 Glycosyl transferase family 8 JR895_RS00500 PF08437 Glycosyl transferase family 8 C-terminal JR895_RS00505 PF01501 Glycosyl transferase family 8 JR895_RS00505 PF08437 Glycosyl transferase family 8 C-terminal JR895_RS00510 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) JR895_RS00515 PF08437 Glycosyl transferase family 8 C-terminal JR895_RS00515 PF01501 Glycosyl transferase family 8 JR895_RS00530 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JR895_RS00535 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JR895_RS00540 PF01370 NAD dependent epimerase/dehydratase family JR895_RS00545 PF00155 Aminotransferase class I and II JR895_RS00550 PF00107 Zinc-binding dehydrogenase JR895_RS00550 PF08240 Alcohol dehydrogenase GroES-like domain JR895_RS00555 PF00535 Glycosyl transferase family 2 JR895_RS00560 PF04748 Divergent polysaccharide deacetylase JR895_RS00565 PF01551 Peptidase family M23 JR895_RS00570 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JR895_RS00570 PF01676 Metalloenzyme superfamily JR895_RS00575 PF00581 Rhodanese-like domain JR895_RS00580 PF00462 Glutaredoxin JR895_RS00585 PF02556 Preprotein translocase subunit SecB JR895_RS00590 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JR895_RS00590 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JR895_RS00595 PF00132 Bacterial transferase hexapeptide (six repeats) JR895_RS00595 PF06426 Serine acetyltransferase, N-terminal JR895_RS00600 PF00588 SpoU rRNA Methylase family JR895_RS00605 PF01070 FMN-dependent dehydrogenase JR895_RS00610 PF07729 FCD domain JR895_RS00610 PF00392 Bacterial regulatory proteins, gntR family JR895_RS00615 PF02652 L-lactate permease JR895_RS00620 PF10928 Protein of unknown function (DUF2810) JR895_RS00630 PF05068 Mannitol repressor JR895_RS00635 PF08125 Mannitol dehydrogenase C-terminal domain JR895_RS00635 PF01232 Mannitol dehydrogenase Rossmann domain JR895_RS00640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JR895_RS00640 PF02378 Phosphotransferase system, EIIC JR895_RS00640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JR895_RS00645 PF11742 Protein of unknown function (DUF3302) JR895_RS00650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JR895_RS00650 PF00529 HlyD membrane-fusion protein of T1SS JR895_RS00655 PF15596 Immunity protein 57 JR895_RS00670 PF03130 PBS lyase HEAT-like repeat JR895_RS00680 PF13417 Glutathione S-transferase, N-terminal domain JR895_RS00680 PF00043 Glutathione S-transferase, C-terminal domain JR895_RS00685 PF12390 Selenocysteine synthase N terminal JR895_RS00685 PF03841 L-seryl-tRNA selenium transferase JR895_RS00690 PF00009 Elongation factor Tu GTP binding domain JR895_RS00690 PF09107 Elongation factor SelB, winged helix JR895_RS00690 PF09106 Elongation factor SelB, winged helix JR895_RS00690 PF03144 Elongation factor Tu domain 2 JR895_RS00695 PF00465 Iron-containing alcohol dehydrogenase JR895_RS00700 PF00171 Aldehyde dehydrogenase family JR895_RS00710 PF11742 Protein of unknown function (DUF3302) JR895_RS00715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JR895_RS00715 PF00529 HlyD membrane-fusion protein of T1SS JR895_RS00720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS00720 PF03466 LysR substrate binding domain JR895_RS00725 PF06629 MltA-interacting protein MipA JR895_RS00735 PF00596 Class II Aldolase and Adducin N-terminal domain JR895_RS00740 PF01261 Xylose isomerase-like TIM barrel JR895_RS00745 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JR895_RS00750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JR895_RS00750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JR895_RS00755 PF03480 Bacterial extracellular solute-binding protein, family 7 JR895_RS00760 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JR895_RS00765 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JR895_RS00770 PF04074 YhcH/YjgK/YiaL JR895_RS00775 PF02615 Malate/L-lactate dehydrogenase JR895_RS00780 PF01614 Bacterial transcriptional regulator JR895_RS00780 PF09339 IclR helix-turn-helix domain JR895_RS00785 PF13247 4Fe-4S dicluster domain JR895_RS00790 PF00155 Aminotransferase class I and II JR895_RS00795 PF00128 Alpha amylase, catalytic domain JR895_RS00800 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JR895_RS00805 PF12833 Helix-turn-helix domain JR895_RS00810 PF02653 Branched-chain amino acid transport system / permease component JR895_RS00815 PF00005 ABC transporter JR895_RS00820 PF13407 Periplasmic binding protein domain JR895_RS00830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JR895_RS00830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JR895_RS00835 PF05360 yiaA/B two helix domain JR895_RS00840 PF05360 yiaA/B two helix domain JR895_RS00845 PF01757 Acyltransferase family JR895_RS00850 PF13983 YsaB-like lipoprotein JR895_RS00855 PF02091 Glycyl-tRNA synthetase alpha subunit JR895_RS00860 PF05746 DALR anticodon binding domain JR895_RS00860 PF02092 Glycyl-tRNA synthetase beta subunit JR895_RS00870 PF01848 Hok/gef family JR895_RS00875 PF00313 'Cold-shock' DNA-binding domain JR895_RS00880 PF01381 Helix-turn-helix JR895_RS00885 PF11254 Protein of unknown function (DUF3053) JR895_RS00890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JR895_RS00890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JR895_RS00895 PF00691 OmpA family JR895_RS00895 PF13488 Glycine zipper JR895_RS00900 PF18364 Molybdopterin oxidoreductase N-terminal domain JR895_RS00900 PF01568 Molydopterin dinucleotide binding domain JR895_RS00900 PF00384 Molybdopterin oxidoreductase JR895_RS00905 PF00583 Acetyltransferase (GNAT) family JR895_RS00910 PF03352 Methyladenine glycosylase JR895_RS00915 PF03797 Autotransporter beta-domain JR895_RS00920 PF07690 Major Facilitator Superfamily JR895_RS00925 PF00884 Sulfatase JR895_RS00925 PF08019 Phosphoethanolamine transferase EptA/EptB JR895_RS00940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JR895_RS00945 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS00950 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS00950 PF12911 N-terminal TM domain of oligopeptide transport permease C JR895_RS00955 PF00005 ABC transporter JR895_RS00955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JR895_RS00960 PF00005 ABC transporter JR895_RS00960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JR895_RS00965 PF03222 Tryptophan/tyrosine permease family JR895_RS00970 PF13940 Toxin Ldr, type I toxin-antitoxin system JR895_RS00975 PF11658 Cellulose biosynthesis protein BcsG JR895_RS00980 PF11120 Cellulose biosynthesis protein BcsF JR895_RS00985 PF10995 Cellulose biosynthesis GIL JR895_RS00990 PF10945 Cellulose biosynthesis protein BcsR JR895_RS00995 PF06564 Cellulose biosynthesis protein BcsQ JR895_RS01000 PF03552 Cellulose synthase JR895_RS01000 PF00535 Glycosyl transferase family 2 JR895_RS01000 PF07238 PilZ domain JR895_RS01005 PF03170 Bacterial cellulose synthase subunit JR895_RS01010 PF01270 Glycosyl hydrolases family 8 JR895_RS01015 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) JR895_RS01020 PF00990 Diguanylate cyclase, GGDEF domain JR895_RS01020 PF00672 HAMP domain JR895_RS01020 PF17154 Gammaproteobacterial periplasmic sensor domain JR895_RS01020 PF00563 EAL domain JR895_RS01025 PF00375 Sodium:dicarboxylate symporter family JR895_RS01030 PF05193 Peptidase M16 inactive domain JR895_RS01030 PF00675 Insulinase (Peptidase family M16) JR895_RS01035 PF00294 pfkB family carbohydrate kinase JR895_RS01040 PF00563 EAL domain JR895_RS01045 PF05170 AsmA family JR895_RS01050 PF07690 Major Facilitator Superfamily JR895_RS01050 PF00083 Sugar (and other) transporter JR895_RS01055 PF03631 Virulence factor BrkB JR895_RS01060 PF03466 LysR substrate binding domain JR895_RS01060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS01065 PF00196 Bacterial regulatory proteins, luxR family JR895_RS01070 PF01204 Trehalase JR895_RS01075 PF03150 Di-haem cytochrome c peroxidase JR895_RS01075 PF00034 Cytochrome c JR895_RS01075 PF14376 Haem-binding domain JR895_RS01080 PF00282 Pyridoxal-dependent decarboxylase conserved domain JR895_RS01085 PF12833 Helix-turn-helix domain JR895_RS01090 PF12833 Helix-turn-helix domain JR895_RS01095 PF00873 AcrB/AcrD/AcrF family JR895_RS01100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JR895_RS01100 PF00529 HlyD membrane-fusion protein of T1SS JR895_RS01110 PF00196 Bacterial regulatory proteins, luxR family JR895_RS01115 PF03729 Short repeat of unknown function (DUF308) JR895_RS01120 PF06411 HdeA/HdeB family JR895_RS01125 PF06411 HdeA/HdeB family JR895_RS01130 PF02308 MgtC family JR895_RS01135 PF00196 Bacterial regulatory proteins, luxR family JR895_RS01140 PF03843 Outer membrane lipoprotein Slp family JR895_RS01160 PF03960 ArsC family JR895_RS01165 PF02040 Arsenical pump membrane protein JR895_RS01170 PF01022 Bacterial regulatory protein, arsR family JR895_RS01180 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR895_RS01180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JR895_RS01185 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JR895_RS01190 PF01432 Peptidase family M3 JR895_RS01195 PF04445 Putative SAM-dependent methyltransferase JR895_RS01200 PF00854 POT family JR895_RS01205 PF00582 Universal stress protein family JR895_RS01210 PF10625 Universal stress protein B (UspB) JR895_RS01215 PF01384 Phosphate transporter family JR895_RS01225 PF10951 Protein of unknown function (DUF2776) JR895_RS01230 PF13258 Domain of unknown function (DUF4049) JR895_RS01235 PF13258 Domain of unknown function (DUF4049) JR895_RS01240 PF13533 Biotin-lipoyl like JR895_RS01245 PF00005 ABC transporter JR895_RS01255 PF01609 Transposase DDE domain JR895_RS01255 PF13808 DDE_Tnp_1-associated JR895_RS01265 PF15631 NTF2 fold immunity protein JR895_RS01270 PF14220 Domain of unknown function (DUF4329) JR895_RS01270 PF05593 RHS Repeat JR895_RS01270 PF03527 RHS protein JR895_RS01275 PF01402 Ribbon-helix-helix protein, copG family JR895_RS01275 PF08753 NikR C terminal nickel binding domain JR895_RS01280 PF00005 ABC transporter JR895_RS01285 PF00005 ABC transporter JR895_RS01290 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS01295 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS01300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JR895_RS01305 PF01648 4'-phosphopantetheinyl transferase superfamily JR895_RS01310 PF01594 AI-2E family transporter JR895_RS01315 PF07690 Major Facilitator Superfamily JR895_RS01320 PF08786 DcrB JR895_RS01325 PF02592 Putative vitamin uptake transporter JR895_RS01330 PF01206 Sulfurtransferase TusA JR895_RS01335 PF00403 Heavy-metal-associated domain JR895_RS01340 PF07947 YhhN family JR895_RS01345 PF10694 Protein of unknown function (DUF2500) JR895_RS01350 PF06611 Protein of unknown function (DUF1145) JR895_RS01360 PF02881 SRP54-type protein, helical bundle domain JR895_RS01360 PF00448 SRP54-type protein, GTPase domain JR895_RS01365 PF00005 ABC transporter JR895_RS01370 PF18075 FtsX extracellular domain JR895_RS01370 PF02687 FtsX-like permease family JR895_RS01375 PF04542 Sigma-70 region 2 JR895_RS01375 PF04545 Sigma-70, region 4 JR895_RS01380 PF13458 Periplasmic binding protein JR895_RS01385 PF12568 Acetyltransferase (GNAT) domain, PanZ JR895_RS01390 PF13458 Periplasmic binding protein JR895_RS01395 PF02653 Branched-chain amino acid transport system / permease component JR895_RS01400 PF11862 Domain of unknown function (DUF3382) JR895_RS01400 PF02653 Branched-chain amino acid transport system / permease component JR895_RS01405 PF12399 Branched-chain amino acid ATP-binding cassette transporter JR895_RS01405 PF00005 ABC transporter JR895_RS01410 PF00005 ABC transporter JR895_RS01415 PF13416 Bacterial extracellular solute-binding protein JR895_RS01420 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS01425 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS01430 PF00005 ABC transporter JR895_RS01430 PF17912 MalK OB fold domain JR895_RS01435 PF03009 Glycerophosphoryl diester phosphodiesterase family JR895_RS01440 PF10956 Protein of unknown function (DUF2756) JR895_RS01450 PF15567 Immunity protein 35 JR895_RS01465 PF05638 Type VI secretion system effector, Hcp JR895_RS01470 PF00583 Acetyltransferase (GNAT) family JR895_RS01475 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JR895_RS01475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JR895_RS01480 PF02678 Pirin JR895_RS01480 PF17954 Quercetinase C-terminal cupin domain JR895_RS01485 PF00356 Bacterial regulatory proteins, lacI family JR895_RS01485 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JR895_RS01490 PF01202 Shikimate kinase JR895_RS01495 PF02447 GntP family permease JR895_RS01500 PF01914 MarC family integral membrane protein JR895_RS01505 PF01118 Semialdehyde dehydrogenase, NAD binding domain JR895_RS01505 PF02774 Semialdehyde dehydrogenase, dimerisation domain JR895_RS01510 PF00128 Alpha amylase, catalytic domain JR895_RS01510 PF02806 Alpha amylase, C-terminal all-beta domain JR895_RS01510 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JR895_RS01515 PF18390 Glycogen debranching enzyme C-terminal domain JR895_RS01515 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JR895_RS01515 PF00128 Alpha amylase, catalytic domain JR895_RS01520 PF00483 Nucleotidyl transferase JR895_RS01525 PF08323 Starch synthase catalytic domain JR895_RS01525 PF00534 Glycosyl transferases group 1 JR895_RS01530 PF00343 Carbohydrate phosphorylase JR895_RS01555 PF01266 FAD dependent oxidoreductase JR895_RS01555 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JR895_RS01560 PF00581 Rhodanese-like domain JR895_RS01565 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease JR895_RS01565 PF01694 Rhomboid family JR895_RS01570 PF08220 DeoR-like helix-turn-helix domain JR895_RS01570 PF00455 DeoR C terminal sensor domain JR895_RS01575 PF00158 Sigma-54 interaction domain JR895_RS01575 PF06956 Regulator of RNA terminal phosphate cyclase JR895_RS01580 PF01139 tRNA-splicing ligase RtcB JR895_RS01585 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain JR895_RS01585 PF01137 RNA 3'-terminal phosphate cyclase JR895_RS01590 PF00196 Bacterial regulatory proteins, luxR family JR895_RS01590 PF17874 MalT-like TPR region JR895_RS01595 PF00343 Carbohydrate phosphorylase JR895_RS01600 PF02446 4-alpha-glucanotransferase JR895_RS01605 PF02447 GntP family permease JR895_RS01610 PF01521 Iron-sulphur cluster biosynthesis JR895_RS01610 PF01106 NifU-like domain JR895_RS01615 PF00156 Phosphoribosyl transferase domain JR895_RS01620 PF00561 alpha/beta hydrolase fold JR895_RS01625 PF04754 Putative transposase, YhgA-like JR895_RS01630 PF09012 FeoC like transcriptional regulator JR895_RS01635 PF07664 Ferrous iron transport protein B C terminus JR895_RS01635 PF02421 Ferrous iron transport protein B JR895_RS01635 PF07670 Nucleoside recognition JR895_RS01635 PF17910 FeoB cytosolic helical domain JR895_RS01640 PF04023 FeoA domain JR895_RS01645 PF17674 HHH domain JR895_RS01645 PF09371 Tex-like protein N-terminal domain JR895_RS01645 PF00575 S1 RNA binding domain JR895_RS01645 PF16921 Tex protein YqgF-like domain JR895_RS01650 PF03449 Transcription elongation factor, N-terminal JR895_RS01650 PF01272 Transcription elongation factor, GreA/GreB, C-term JR895_RS01655 PF00486 Transcriptional regulatory protein, C terminal JR895_RS01655 PF00072 Response regulator receiver domain JR895_RS01660 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS01660 PF00672 HAMP domain JR895_RS01660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS01665 PF01293 Phosphoenolpyruvate carboxykinase JR895_RS01670 PF13687 Domain of unknown function (DUF4153) JR895_RS01675 PF01430 Hsp33 protein JR895_RS01680 PF01479 S4 domain JR895_RS01685 PF13419 Haloacid dehalogenase-like hydrolase JR895_RS01690 PF07095 Intracellular growth attenuator protein IgaA JR895_RS01695 PF00293 NUDIX domain JR895_RS01700 PF00912 Transglycosylase JR895_RS01700 PF00905 Penicillin binding protein transpeptidase domain JR895_RS01700 PF17092 Penicillin-binding protein OB-like domain JR895_RS01710 PF05137 Fimbrial assembly protein (PilN) JR895_RS01720 PF10748 DNA utilization proteins HofP JR895_RS01725 PF00263 Bacterial type II and III secretion system protein JR895_RS01725 PF03958 Bacterial type II/III secretion system short domain JR895_RS01730 PF01202 Shikimate kinase JR895_RS01735 PF01761 3-dehydroquinate synthase JR895_RS01740 PF05036 Sporulation related domain JR895_RS01745 PF02086 D12 class N6 adenine-specific DNA methyltransferase JR895_RS01750 PF00834 Ribulose-phosphate 3 epimerase family JR895_RS01755 PF13419 Haloacid dehalogenase-like hydrolase JR895_RS01760 PF00579 tRNA synthetases class I (W and Y) JR895_RS01765 PF14502 Helix-turn-helix domain JR895_RS01765 PF14503 YhfZ C-terminal domain JR895_RS01775 PF01168 Alanine racemase, N-terminal domain JR895_RS01780 PF01676 Metalloenzyme superfamily JR895_RS01785 PF02126 Phosphotriesterase family JR895_RS01790 PF10941 Protein of unknown function DUF2620 JR895_RS01795 PF10797 Protein of unknown function JR895_RS01800 PF00155 Aminotransferase class I and II JR895_RS01805 PF00392 Bacterial regulatory proteins, gntR family JR895_RS01805 PF07702 UTRA domain JR895_RS01810 PF00294 pfkB family carbohydrate kinase JR895_RS01815 PF01261 Xylose isomerase-like TIM barrel JR895_RS01820 PF01380 SIS domain JR895_RS01825 PF13520 Amino acid permease JR895_RS01830 PF13978 Protein of unknown function (DUF4223) JR895_RS01835 PF14824 Sirohaem biosynthesis protein central JR895_RS01835 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JR895_RS01835 PF10414 Sirohaem synthase dimerisation region JR895_RS01840 PF01226 Formate/nitrite transporter JR895_RS01845 PF13806 Rieske-like [2Fe-2S] domain JR895_RS01850 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JR895_RS01850 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR895_RS01850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JR895_RS01850 PF04324 BFD-like [2Fe-2S] binding domain JR895_RS01850 PF18267 Rubredoxin NAD+ reductase C-terminal domain JR895_RS01855 PF07690 Major Facilitator Superfamily JR895_RS01860 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JR895_RS01865 PF10832 Protein of unknown function (DUF2559) JR895_RS01870 PF02661 Fic/DOC family JR895_RS01875 PF00117 Glutamine amidotransferase class-I JR895_RS01880 PF00202 Aminotransferase class-III JR895_RS01885 PF12805 FUSC-like inner membrane protein yccS JR895_RS01890 PF00027 Cyclic nucleotide-binding domain JR895_RS01890 PF13545 Crp-like helix-turn-helix domain JR895_RS01895 PF02566 OsmC-like protein JR895_RS01900 PF00485 Phosphoribulokinase / Uridine kinase family JR895_RS01905 PF06794 Uncharacterised protein family (UPF0270) JR895_RS01910 PF00561 alpha/beta hydrolase fold JR895_RS01915 PF12848 ABC transporter JR895_RS01915 PF00005 ABC transporter JR895_RS01920 PF02525 Flavodoxin-like fold JR895_RS01925 PF00999 Sodium/hydrogen exchanger family JR895_RS01925 PF02254 TrkA-N domain JR895_RS01930 PF09526 Probable metal-binding protein (DUF2387) JR895_RS01935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JR895_RS01940 PF04102 SlyX JR895_RS01945 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JR895_RS01945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JR895_RS01950 PF08348 YheO-like PAS domain JR895_RS01950 PF13309 HTH domain JR895_RS01955 PF02635 DsrE/DsrF-like family JR895_RS01960 PF02635 DsrE/DsrF-like family JR895_RS01965 PF04077 DsrH like protein JR895_RS01970 PF00164 Ribosomal protein S12/S23 JR895_RS01975 PF00177 Ribosomal protein S7p/S5e JR895_RS01980 PF00679 Elongation factor G C-terminus JR895_RS01980 PF03764 Elongation factor G, domain IV JR895_RS01980 PF14492 Elongation Factor G, domain II JR895_RS01980 PF03144 Elongation factor Tu domain 2 JR895_RS01980 PF00009 Elongation factor Tu GTP binding domain JR895_RS01985 PF03144 Elongation factor Tu domain 2 JR895_RS01985 PF03143 Elongation factor Tu C-terminal domain JR895_RS01985 PF00009 Elongation factor Tu GTP binding domain JR895_RS01990 PF02839 Carbohydrate binding domain JR895_RS01995 PF04324 BFD-like [2Fe-2S] binding domain JR895_RS02000 PF00210 Ferritin-like domain JR895_RS02005 PF01478 Type IV leader peptidase family JR895_RS02010 PF04612 Type II secretion system (T2SS), protein M JR895_RS02015 PF05134 Type II secretion system (T2SS), protein L JR895_RS02015 PF12693 GspL periplasmic domain JR895_RS02020 PF03934 Type II secretion system (T2SS), protein K JR895_RS02025 PF07963 Prokaryotic N-terminal methylation motif JR895_RS02025 PF11612 Type II secretion system (T2SS), protein J JR895_RS02030 PF02501 Type II secretion system (T2SS), protein I JR895_RS02030 PF07963 Prokaryotic N-terminal methylation motif JR895_RS02035 PF12019 Type II transport protein GspH JR895_RS02035 PF07963 Prokaryotic N-terminal methylation motif JR895_RS02040 PF08334 Type II secretion system (T2SS), protein G JR895_RS02040 PF07963 Prokaryotic N-terminal methylation motif JR895_RS02050 PF00437 Type II/IV secretion system protein JR895_RS02055 PF00263 Bacterial type II and III secretion system protein JR895_RS02055 PF03958 Bacterial type II/III secretion system short domain JR895_RS02060 PF11356 Type II secretion system protein C JR895_RS02065 PF01471 Putative peptidoglycan binding domain JR895_RS02065 PF13401 AAA domain JR895_RS02075 PF00338 Ribosomal protein S10p/S20e JR895_RS02080 PF00297 Ribosomal protein L3 JR895_RS02085 PF00573 Ribosomal protein L4/L1 family JR895_RS02090 PF00276 Ribosomal protein L23 JR895_RS02095 PF00181 Ribosomal Proteins L2, RNA binding domain JR895_RS02095 PF03947 Ribosomal Proteins L2, C-terminal domain JR895_RS02100 PF00203 Ribosomal protein S19 JR895_RS02105 PF00237 Ribosomal protein L22p/L17e JR895_RS02110 PF07650 KH domain JR895_RS02110 PF00189 Ribosomal protein S3, C-terminal domain JR895_RS02115 PF00252 Ribosomal protein L16p/L10e JR895_RS02120 PF00831 Ribosomal L29 protein JR895_RS02125 PF00366 Ribosomal protein S17 JR895_RS02130 PF00238 Ribosomal protein L14p/L23e JR895_RS02135 PF00467 KOW motif JR895_RS02135 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JR895_RS02140 PF00673 ribosomal L5P family C-terminus JR895_RS02140 PF00281 Ribosomal protein L5 JR895_RS02145 PF00253 Ribosomal protein S14p/S29e JR895_RS02150 PF00410 Ribosomal protein S8 JR895_RS02155 PF00347 Ribosomal protein L6 JR895_RS02160 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JR895_RS02165 PF00333 Ribosomal protein S5, N-terminal domain JR895_RS02165 PF03719 Ribosomal protein S5, C-terminal domain JR895_RS02170 PF00327 Ribosomal protein L30p/L7e JR895_RS02175 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JR895_RS02180 PF00344 SecY translocase JR895_RS02185 PF00444 Ribosomal protein L36 JR895_RS02190 PF00416 Ribosomal protein S13/S18 JR895_RS02195 PF00411 Ribosomal protein S11 JR895_RS02200 PF01479 S4 domain JR895_RS02200 PF00163 Ribosomal protein S4/S9 N-terminal domain JR895_RS02205 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JR895_RS02205 PF01000 RNA polymerase Rpb3/RpoA insert domain JR895_RS02205 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JR895_RS02210 PF01196 Ribosomal protein L17 JR895_RS02215 PF09350 Domain of unknown function (DUF1992) JR895_RS02220 PF13411 MerR HTH family regulatory protein JR895_RS02225 PF03889 Alternative ribosome-rescue factor A JR895_RS02230 PF01741 Large-conductance mechanosensitive channel, MscL JR895_RS02235 PF02080 TrkA-C domain JR895_RS02235 PF02254 TrkA-N domain JR895_RS02240 PF01029 NusB family JR895_RS02240 PF01189 16S rRNA methyltransferase RsmB/F JR895_RS02245 PF02911 Formyl transferase, C-terminal domain JR895_RS02245 PF00551 Formyl transferase JR895_RS02250 PF01327 Polypeptide deformylase JR895_RS02255 PF02481 DNA recombination-mediator protein A JR895_RS02255 PF17782 DprA winged helix domain JR895_RS02260 PF04361 Protein of unknown function (DUF494) JR895_RS02265 PF01396 Topoisomerase DNA binding C4 zinc finger JR895_RS02270 PF01300 Telomere recombination JR895_RS02275 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JR895_RS02275 PF01488 Shikimate / quinate 5-dehydrogenase JR895_RS02275 PF08501 Shikimate dehydrogenase substrate binding domain JR895_RS02280 PF07369 Protein of unknown function (DUF1488) JR895_RS02285 PF00132 Bacterial transferase hexapeptide (six repeats) JR895_RS02325 PF00005 ABC transporter JR895_RS02330 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS02335 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS02340 PF00497 Bacterial extracellular solute-binding proteins, family 3 JR895_RS02350 PF00873 AcrB/AcrD/AcrF family JR895_RS02355 PF00529 HlyD membrane-fusion protein of T1SS JR895_RS02355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JR895_RS02360 PF00440 Bacterial regulatory proteins, tetR family JR895_RS02360 PF08361 MAATS-type transcriptional repressor, C-terminal region JR895_RS02365 PF10831 Protein of unknown function (DUF2556) JR895_RS02370 PF01555 DNA methylase JR895_RS02375 PF02954 Bacterial regulatory protein, Fis family JR895_RS02380 PF01207 Dihydrouridine synthase (Dus) JR895_RS02390 PF00474 Sodium:solute symporter family JR895_RS02395 PF06196 Protein of unknown function (DUF997) JR895_RS02400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JR895_RS02400 PF02785 Biotin carboxylase C-terminal domain JR895_RS02400 PF00289 Biotin carboxylase, N-terminal domain JR895_RS02405 PF00364 Biotin-requiring enzyme JR895_RS02410 PF08240 Alcohol dehydrogenase GroES-like domain JR895_RS02410 PF00107 Zinc-binding dehydrogenase JR895_RS02415 PF00563 EAL domain JR895_RS02415 PF17157 Gammaproteobacterial periplasmic sensor domain JR895_RS02415 PF00990 Diguanylate cyclase, GGDEF domain JR895_RS02425 PF04085 rod shape-determining protein MreC JR895_RS02430 PF04093 rod shape-determining protein MreD JR895_RS02435 PF02545 Maf-like protein JR895_RS02440 PF00575 S1 RNA binding domain JR895_RS02440 PF10150 Ribonuclease E/G family JR895_RS02445 PF13116 Protein of unknown function JR895_RS02445 PF13502 AsmA-like C-terminal region JR895_RS02450 PF01523 Putative modulator of DNA gyrase JR895_RS02455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS02455 PF03466 LysR substrate binding domain JR895_RS02460 PF07869 Protein of unknown function (DUF1656) JR895_RS02465 PF13533 Biotin-lipoyl like JR895_RS02470 PF04632 Fusaric acid resistance protein family JR895_RS02475 PF01337 Barstar (barnase inhibitor) JR895_RS02480 PF07338 Protein of unknown function (DUF1471) JR895_RS02485 PF02863 Arginine repressor, C-terminal domain JR895_RS02485 PF01316 Arginine repressor, DNA binding domain JR895_RS02490 PF00056 lactate/malate dehydrogenase, NAD binding domain JR895_RS02490 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JR895_RS02495 PF13180 PDZ domain JR895_RS02500 PF00595 PDZ domain JR895_RS02500 PF13180 PDZ domain JR895_RS02505 PF06295 Protein of unknown function (DUF1043) JR895_RS02510 PF03969 AFG1-like ATPase JR895_RS02515 PF00572 Ribosomal protein L13 JR895_RS02520 PF00380 Ribosomal protein S9/S16 JR895_RS02525 PF02798 Glutathione S-transferase, N-terminal domain JR895_RS02525 PF00043 Glutathione S-transferase, C-terminal domain JR895_RS02530 PF04386 Stringent starvation protein B JR895_RS02535 PF03606 C4-dicarboxylate anaerobic carrier JR895_RS02540 PF00392 Bacterial regulatory proteins, gntR family JR895_RS02540 PF07729 FCD domain JR895_RS02545 PF00701 Dihydrodipicolinate synthetase family JR895_RS02550 PF07690 Major Facilitator Superfamily JR895_RS02555 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JR895_RS02560 PF00480 ROK family JR895_RS02565 PF04074 YhcH/YjgK/YiaL JR895_RS02570 PF06250 YhcG PDDEXK nuclease domain JR895_RS02570 PF17761 DUF1016 N-terminal domain JR895_RS02575 PF06551 Protein of unknown function (DUF1120) JR895_RS02585 PF13954 PapC N-terminal domain JR895_RS02585 PF00577 Outer membrane usher protein JR895_RS02585 PF13953 PapC C-terminal domain JR895_RS02590 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JR895_RS02595 PF06551 Protein of unknown function (DUF1120) JR895_RS02600 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JR895_RS02600 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR895_RS02605 PF01493 GXGXG motif JR895_RS02605 PF01645 Conserved region in glutamate synthase JR895_RS02605 PF04898 Glutamate synthase central domain JR895_RS02605 PF00310 Glutamine amidotransferases class-II JR895_RS02610 PF04055 Radical SAM superfamily JR895_RS02610 PF16199 Radical_SAM C-terminal domain JR895_RS02615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS02615 PF18415 Histidine kinase receptor ArcB trans-membrane domain JR895_RS02615 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS02615 PF01627 Hpt domain JR895_RS02615 PF00989 PAS fold JR895_RS02615 PF00072 Response regulator receiver domain JR895_RS02625 PF00912 Transglycosylase JR895_RS02630 PF10707 PhoP regulatory network protein YrbL JR895_RS02635 PF00381 PTS HPr component phosphorylation site JR895_RS02640 PF03668 P-loop ATPase protein family JR895_RS02645 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JR895_RS02650 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JR895_RS02655 PF04552 Sigma-54, DNA binding domain JR895_RS02655 PF00309 Sigma-54 factor, Activator interacting domain (AID) JR895_RS02655 PF04963 Sigma-54 factor, core binding domain JR895_RS02660 PF00005 ABC transporter JR895_RS02660 PF12399 Branched-chain amino acid ATP-binding cassette transporter JR895_RS02665 PF03968 OstA-like protein JR895_RS02670 PF06835 Lipopolysaccharide-assembly, LptC-related JR895_RS02680 PF00571 CBS domain JR895_RS02680 PF01380 SIS domain JR895_RS02685 PF01699 Sodium/calcium exchanger protein JR895_RS02690 PF00005 ABC transporter JR895_RS02695 PF02405 Permease MlaE JR895_RS02700 PF02470 MlaD protein JR895_RS02705 PF05494 MlaC protein JR895_RS02710 PF13466 STAS domain JR895_RS02715 PF01722 BolA-like protein JR895_RS02720 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JR895_RS02725 PF13693 Winged helix-turn-helix DNA-binding JR895_RS02730 PF00348 Polyprenyl synthetase JR895_RS02735 PF00829 Ribosomal prokaryotic L21 protein JR895_RS02740 PF01016 Ribosomal L27 protein JR895_RS02745 PF00892 EamA-like transporter family JR895_RS02750 PF01926 50S ribosome-binding GTPase JR895_RS02750 PF01018 GTP1/OBG JR895_RS02755 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JR895_RS02760 PF01272 Transcription elongation factor, GreA/GreB, C-term JR895_RS02760 PF03449 Transcription elongation factor, N-terminal JR895_RS02765 PF01985 CRS1 / YhbY (CRM) domain JR895_RS02770 PF01728 FtsJ-like methyltransferase JR895_RS02775 PF17862 AAA+ lid domain JR895_RS02775 PF06480 FtsH Extracellular JR895_RS02775 PF01434 Peptidase family M41 JR895_RS02775 PF00004 ATPase family associated with various cellular activities (AAA) JR895_RS02780 PF00809 Pterin binding enzyme JR895_RS02785 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JR895_RS02785 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JR895_RS02785 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JR895_RS02785 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JR895_RS02790 PF03840 Preprotein translocase SecG subunit JR895_RS02800 PF00884 Sulfatase JR895_RS02805 PF00764 Arginosuccinate synthase JR895_RS02815 PF17384 RimP C-terminal SH3 domain JR895_RS02815 PF02576 RimP N-terminal domain JR895_RS02820 PF00575 S1 RNA binding domain JR895_RS02820 PF08529 NusA N-terminal domain JR895_RS02820 PF13184 NusA-like KH domain JR895_RS02825 PF00009 Elongation factor Tu GTP binding domain JR895_RS02825 PF08364 Bacterial translation initiation factor IF-2 associated region JR895_RS02825 PF04760 Translation initiation factor IF-2, N-terminal region JR895_RS02825 PF11987 Translation-initiation factor 2 JR895_RS02830 PF02033 Ribosome-binding factor A JR895_RS02835 PF09157 Pseudouridine synthase II TruB, C-terminal JR895_RS02835 PF16198 tRNA pseudouridylate synthase B C-terminal domain JR895_RS02835 PF01509 TruB family pseudouridylate synthase (N terminal domain) JR895_RS02840 PF00312 Ribosomal protein S15 JR895_RS02845 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JR895_RS02845 PF01138 3' exoribonuclease family, domain 1 JR895_RS02845 PF03725 3' exoribonuclease family, domain 2 JR895_RS02845 PF00575 S1 RNA binding domain JR895_RS02845 PF00013 KH domain JR895_RS02850 PF07719 Tetratricopeptide repeat JR895_RS02850 PF13181 Tetratricopeptide repeat JR895_RS02860 PF00271 Helicase conserved C-terminal domain JR895_RS02860 PF00270 DEAD/DEAH box helicase JR895_RS02860 PF03880 DbpA RNA binding domain JR895_RS02860 PF12343 Cold shock protein DEAD box A JR895_RS02865 PF03222 Tryptophan/tyrosine permease family JR895_RS02870 PF00296 Luciferase-like monooxygenase JR895_RS02875 PF01136 Peptidase family U32 JR895_RS02880 PF01136 Peptidase family U32 JR895_RS02885 PF02036 SCP-2 sterol transfer family JR895_RS02890 PF13508 Acetyltransferase (GNAT) domain JR895_RS02895 PF01541 GIY-YIG catalytic domain JR895_RS02905 PF01965 DJ-1/PfpI family JR895_RS02910 PF13460 NAD(P)H-binding JR895_RS02915 PF03773 Predicted permease JR895_RS02920 PF04972 BON domain JR895_RS02925 PF13580 SIS domain JR895_RS02930 PF02021 Uncharacterised protein family UPF0102 JR895_RS02935 PF04348 LppC putative lipoprotein JR895_RS02940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JR895_RS02945 PF00419 Fimbrial protein JR895_RS02950 PF13953 PapC C-terminal domain JR895_RS02950 PF13954 PapC N-terminal domain JR895_RS02950 PF00577 Outer membrane usher protein JR895_RS02955 PF02753 Pili assembly chaperone PapD, C-terminal domain JR895_RS02955 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JR895_RS02960 PF00419 Fimbrial protein JR895_RS02965 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JR895_RS02970 PF03613 PTS system mannose/fructose/sorbose family IID component JR895_RS02980 PF03830 PTS system sorbose subfamily IIB component JR895_RS02985 PF01116 Fructose-bisphosphate aldolase class-II JR895_RS02990 PF01380 SIS domain JR895_RS02995 PF01979 Amidohydrolase family JR895_RS03000 PF03610 PTS system fructose IIA component JR895_RS03005 PF03613 PTS system mannose/fructose/sorbose family IID component JR895_RS03010 PF03609 PTS system sorbose-specific iic component JR895_RS03015 PF03830 PTS system sorbose subfamily IIB component JR895_RS03020 PF08013 Tagatose 6 phosphate kinase JR895_RS03025 PF00455 DeoR C terminal sensor domain JR895_RS03025 PF08220 DeoR-like helix-turn-helix domain JR895_RS03030 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system JR895_RS03035 PF15937 prlF antitoxin for toxin YhaV_toxin JR895_RS03040 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JR895_RS03040 PF08666 SAF domain JR895_RS03045 PF07690 Major Facilitator Superfamily JR895_RS03050 PF03328 HpcH/HpaI aldolase/citrate lyase family JR895_RS03055 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JR895_RS03055 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JR895_RS03060 PF02595 Glycerate kinase family JR895_RS03085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS03085 PF03466 LysR substrate binding domain JR895_RS03090 PF00291 Pyridoxal-phosphate dependent enzyme JR895_RS03095 PF03222 Tryptophan/tyrosine permease family JR895_RS03100 PF00871 Acetokinase family JR895_RS03105 PF01228 Glycine radical JR895_RS03105 PF02901 Pyruvate formate lyase-like JR895_RS03110 PF01042 Endoribonuclease L-PSP JR895_RS03115 PF03315 Serine dehydratase beta chain JR895_RS03115 PF03313 Serine dehydratase alpha chain JR895_RS03125 PF03313 Serine dehydratase alpha chain JR895_RS03135 PF17954 Quercetinase C-terminal cupin domain JR895_RS03135 PF02678 Pirin JR895_RS03140 PF03466 LysR substrate binding domain JR895_RS03140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS03145 PF05656 Protein of unknown function (DUF805) JR895_RS03150 PF05656 Protein of unknown function (DUF805) JR895_RS03155 PF13409 Glutathione S-transferase, N-terminal domain JR895_RS03160 PF07681 DoxX JR895_RS03165 PF13997 YqjK-like protein JR895_RS03170 PF07332 Putative Actinobacterial Holin-X, holin superfamily III JR895_RS03175 PF05957 Bacterial protein of unknown function (DUF883) JR895_RS03180 PF06476 Protein of unknown function (DUF1090) JR895_RS03185 PF13721 SecD export protein N-terminal TM region JR895_RS03190 PF09335 SNARE associated Golgi protein JR895_RS03195 PF07729 FCD domain JR895_RS03195 PF00392 Bacterial regulatory proteins, gntR family JR895_RS03200 PF07690 Major Facilitator Superfamily JR895_RS03205 PF02614 Glucuronate isomerase JR895_RS03210 PF08666 SAF domain JR895_RS03210 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JR895_RS03215 PF10688 Bacterial inner membrane protein JR895_RS03220 PF00375 Sodium:dicarboxylate symporter family JR895_RS03225 PF03741 Integral membrane protein TerC family JR895_RS03230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JR895_RS03235 PF02698 DUF218 domain JR895_RS03240 PF01863 Protein of unknown function DUF45 JR895_RS03245 PF05175 Methyltransferase small domain JR895_RS03250 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system JR895_RS03255 PF01381 Helix-turn-helix JR895_RS03260 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR895_RS03260 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JR895_RS03265 PF01204 Trehalase JR895_RS03275 PF13520 Amino acid permease JR895_RS03280 PF04074 YhcH/YjgK/YiaL JR895_RS03285 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JR895_RS03285 PF00703 Glycosyl hydrolases family 2 JR895_RS03285 PF02837 Glycosyl hydrolases family 2, sugar binding domain JR895_RS03285 PF02929 Beta galactosidase small chain JR895_RS03285 PF16353 Domain of unknown function(DUF4981) JR895_RS03290 PF00356 Bacterial regulatory proteins, lacI family JR895_RS03295 PF01588 Putative tRNA binding domain JR895_RS03300 PF00202 Aminotransferase class-III JR895_RS03305 PF08447 PAS fold JR895_RS03305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JR895_RS03310 PF03551 Transcriptional regulator PadR-like family JR895_RS03315 PF04954 Siderophore-interacting protein JR895_RS03315 PF08021 Siderophore-interacting FAD-binding domain JR895_RS03325 PF03167 Uracil DNA glycosylase superfamily JR895_RS03330 PF04546 Sigma-70, non-essential region JR895_RS03330 PF03979 Sigma-70 factor, region 1.1 JR895_RS03330 PF00140 Sigma-70 factor, region 1.2 JR895_RS03330 PF04542 Sigma-70 region 2 JR895_RS03330 PF04539 Sigma-70 region 3 JR895_RS03330 PF04545 Sigma-70, region 4 JR895_RS03335 PF08278 DNA primase DnaG DnaB-binding JR895_RS03335 PF08275 DNA primase catalytic core, N-terminal domain JR895_RS03335 PF01807 CHC2 zinc finger JR895_RS03335 PF10410 DnaB-helicase binding domain of primase JR895_RS03340 PF01165 Ribosomal protein S21 JR895_RS03345 PF00814 Glycoprotease family JR895_RS03350 PF00939 Sodium:sulfate symporter transmembrane region JR895_RS03355 PF05683 Fumarase C-terminus JR895_RS03360 PF05681 Fumarate hydratase (Fumerase) JR895_RS03365 PF03466 LysR substrate binding domain JR895_RS03365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS03370 PF02660 Glycerol-3-phosphate acyltransferase JR895_RS03375 PF02152 Dihydroneopterin aldolase JR895_RS03380 PF02673 Bacitracin resistance protein BacA JR895_RS03385 PF01966 HD domain JR895_RS03385 PF12627 Probable RNA and SrmB- binding site of polymerase A JR895_RS03385 PF01743 Poly A polymerase head domain JR895_RS03390 PF08239 Bacterial SH3 domain JR895_RS03395 PF01928 CYTH domain JR895_RS03400 PF03710 Glutamate-ammonia ligase adenylyltransferase JR895_RS03400 PF08335 GlnD PII-uridylyltransferase JR895_RS03405 PF00294 pfkB family carbohydrate kinase JR895_RS03405 PF01467 Cytidylyltransferase-like JR895_RS03420 PF15975 Flotillin JR895_RS03420 PF01145 SPFH domain / Band 7 family JR895_RS03425 PF07290 Protein of unknown function (DUF1449) JR895_RS03430 PF08971 Glycogen synthesis protein JR895_RS03445 PF00577 Outer membrane usher protein JR895_RS03445 PF13954 PapC N-terminal domain JR895_RS03445 PF13953 PapC C-terminal domain JR895_RS03450 PF00419 Fimbrial protein JR895_RS03455 PF04380 Membrane fusogenic activity JR895_RS03460 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JR895_RS03470 PF02535 ZIP Zinc transporter JR895_RS03475 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JR895_RS03480 PF03738 Glutathionylspermidine synthase preATP-grasp JR895_RS03485 PF06693 Protein of unknown function (DUF1190) JR895_RS03490 PF02321 Outer membrane efflux protein JR895_RS03495 PF00293 NUDIX domain JR895_RS03500 PF06853 Protein of unknown function (DUF1249) JR895_RS03505 PF00149 Calcineurin-like phosphoesterase JR895_RS03510 PF05728 Uncharacterised protein family (UPF0227) JR895_RS03515 PF00986 DNA gyrase B subunit, carboxyl terminus JR895_RS03515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS03515 PF01751 Toprim domain JR895_RS03515 PF00204 DNA gyrase B JR895_RS03520 PF03992 Antibiotic biosynthesis monooxygenase JR895_RS03525 PF02525 Flavodoxin-like fold JR895_RS03530 PF10840 Protein of unknown function (DUF2645) JR895_RS03535 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS03535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS03535 PF08521 Two-component sensor kinase N-terminal JR895_RS03540 PF00486 Transcriptional regulatory protein, C terminal JR895_RS03540 PF00072 Response regulator receiver domain JR895_RS03545 PF04076 Bacterial OB fold (BOF) protein JR895_RS03550 PF06445 GyrI-like small molecule binding domain JR895_RS03555 PF15723 Motility quorum-sensing regulator, toxin of MqsA JR895_RS03560 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA JR895_RS03565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JR895_RS03570 PF00521 DNA gyrase/topoisomerase IV, subunit A JR895_RS03570 PF03989 DNA gyrase C-terminal domain, beta-propeller JR895_RS03575 PF01553 Acyltransferase JR895_RS03580 PF00394 Multicopper oxidase JR895_RS03580 PF07731 Multicopper oxidase JR895_RS03580 PF07732 Multicopper oxidase JR895_RS03585 PF11842 Domain of unknown function (DUF3362) JR895_RS03585 PF04055 Radical SAM superfamily JR895_RS03585 PF08497 Radical SAM N-terminal JR895_RS03590 PF04728 Lipoprotein leucine-zipper JR895_RS03595 PF12883 Protein of unknown function (DUF3828) JR895_RS03600 PF00248 Aldo/keto reductase family JR895_RS03605 PF00465 Iron-containing alcohol dehydrogenase JR895_RS03610 PF12833 Helix-turn-helix domain JR895_RS03610 PF06719 AraC-type transcriptional regulator N-terminus JR895_RS03615 PF09335 SNARE associated Golgi protein JR895_RS03620 PF01053 Cys/Met metabolism PLP-dependent enzyme JR895_RS03625 PF01618 MotA/TolQ/ExbB proton channel family JR895_RS03630 PF02472 Biopolymer transport protein ExbD/TolR JR895_RS03640 PF03350 Uncharacterized protein family, UPF0114 JR895_RS03645 PF00248 Aldo/keto reductase family JR895_RS03650 PF01738 Dienelactone hydrolase family JR895_RS03655 PF11115 Protein of unknown function (DUF2623) JR895_RS03660 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JR895_RS03660 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal JR895_RS03665 PF13247 4Fe-4S dicluster domain JR895_RS03670 PF03916 Polysulphide reductase, NrfD JR895_RS03675 PF00374 Nickel-dependent hydrogenase JR895_RS03680 PF01750 Hydrogenase maturation protease JR895_RS03685 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE JR895_RS03690 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA JR895_RS03695 PF01455 HupF/HypC family JR895_RS03700 PF02798 Glutathione S-transferase, N-terminal domain JR895_RS03705 PF05257 CHAP domain JR895_RS03705 PF03738 Glutathionylspermidine synthase preATP-grasp JR895_RS03710 PF01384 Phosphate transporter family JR895_RS03730 PF01943 Polysaccharide biosynthesis protein JR895_RS03740 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) JR895_RS03745 PF03739 Lipopolysaccharide export system permease LptF/LptG JR895_RS03755 PF00155 Aminotransferase class I and II JR895_RS03760 PF00550 Phosphopantetheine attachment site JR895_RS03770 PF14535 AMP-binding enzyme C-terminal domain JR895_RS03770 PF00501 AMP-binding enzyme JR895_RS03780 PF07729 FCD domain JR895_RS03780 PF00392 Bacterial regulatory proteins, gntR family JR895_RS03785 PF02913 FAD linked oxidases, C-terminal domain JR895_RS03785 PF01565 FAD binding domain JR895_RS03790 PF01565 FAD binding domain JR895_RS03795 PF02754 Cysteine-rich domain JR895_RS03795 PF13183 4Fe-4S dicluster domain JR895_RS03800 PF03928 Haem-degrading JR895_RS03805 PF01274 Malate synthase JR895_RS03810 PF02652 L-lactate permease JR895_RS03820 PF11356 Type II secretion system protein C JR895_RS03825 PF12693 GspL periplasmic domain JR895_RS03830 PF04612 Type II secretion system (T2SS), protein M JR895_RS03840 PF04474 Protein of unknown function (DUF554) JR895_RS03845 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JR895_RS03845 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JR895_RS03845 PF01276 Orn/Lys/Arg decarboxylase, major domain JR895_RS03850 PF03825 Nucleoside H+ symporter JR895_RS03855 PF01464 Transglycosylase SLT domain JR895_RS03855 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JR895_RS03860 PF04362 Bacterial Fe(2+) trafficking JR895_RS03865 PF00730 HhH-GPD superfamily base excision DNA repair protein JR895_RS03865 PF14815 NUDIX domain JR895_RS03865 PF00633 Helix-hairpin-helix motif JR895_RS03865 PF10576 Iron-sulfur binding domain of endonuclease III JR895_RS03870 PF02390 Putative methyltransferase JR895_RS03875 PF04320 Protein with unknown function (DUF469) JR895_RS03880 PF11101 Protein of unknown function (DUF2884) JR895_RS03885 PF00710 Asparaginase, N-terminal JR895_RS03885 PF17763 Glutaminase/Asparaginase C-terminal domain JR895_RS03890 PF06717 Protein of unknown function (DUF1202) JR895_RS03895 PF06969 HemN C-terminal domain JR895_RS03895 PF04055 Radical SAM superfamily JR895_RS03900 PF01725 Ham1 family JR895_RS03905 PF02594 Uncharacterised ACR, YggU family COG1872 JR895_RS03910 PF02325 YGGT family JR895_RS03915 PF01168 Alanine racemase, N-terminal domain JR895_RS03920 PF00437 Type II/IV secretion system protein JR895_RS03925 PF03652 Holliday junction resolvase JR895_RS03930 PF02622 Uncharacterized ACR, COG1678 JR895_RS03935 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JR895_RS03935 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JR895_RS03940 PF04452 RNA methyltransferase JR895_RS03945 PF04231 Endonuclease I JR895_RS03950 PF10263 SprT-like family JR895_RS03950 PF17283 SprT-like zinc ribbon domain JR895_RS03955 PF00083 Sugar (and other) transporter JR895_RS03960 PF00438 S-adenosylmethionine synthetase, N-terminal domain JR895_RS03960 PF02772 S-adenosylmethionine synthetase, central domain JR895_RS03960 PF02773 S-adenosylmethionine synthetase, C-terminal domain JR895_RS03965 PF17430 Uncharacterized YqgC-like JR895_RS03970 PF11036 Virulence promoting factor JR895_RS03975 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JR895_RS03975 PF17944 Arginine decarboxylase C-terminal helical extension JR895_RS03975 PF17810 Arginine decarboxylase helical bundle domain JR895_RS03980 PF00491 Arginase family JR895_RS03985 PF01435 Peptidase family M48 JR895_RS03990 PF02779 Transketolase, pyrimidine binding domain JR895_RS03990 PF02780 Transketolase, C-terminal domain JR895_RS03990 PF00456 Transketolase, thiamine diphosphate binding domain JR895_RS03995 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JR895_RS04000 PF02378 Phosphotransferase system, EIIC JR895_RS04000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JR895_RS04005 PF08240 Alcohol dehydrogenase GroES-like domain JR895_RS04005 PF00107 Zinc-binding dehydrogenase JR895_RS04010 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JR895_RS04015 PF05068 Mannitol repressor JR895_RS04025 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JR895_RS04025 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JR895_RS04030 PF00162 Phosphoglycerate kinase JR895_RS04035 PF01116 Fructose-bisphosphate aldolase class-II JR895_RS04040 PF00665 Integrase core domain JR895_RS04040 PF13936 Helix-turn-helix domain JR895_RS04045 PF05552 Conserved TM helix JR895_RS04045 PF00924 Mechanosensitive ion channel JR895_RS04055 PF04402 Protein of unknown function (DUF541) JR895_RS04060 PF03466 LysR substrate binding domain JR895_RS04060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS04065 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JR895_RS04065 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JR895_RS04070 PF00378 Enoyl-CoA hydratase/isomerase JR895_RS04080 PF01642 Methylmalonyl-CoA mutase JR895_RS04080 PF02310 B12 binding domain JR895_RS04085 PF03466 LysR substrate binding domain JR895_RS04085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS04090 PF03466 LysR substrate binding domain JR895_RS04095 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JR895_RS04100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JR895_RS04100 PF01842 ACT domain JR895_RS04100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JR895_RS04110 PF01812 5-formyltetrahydrofolate cyclo-ligase family JR895_RS04120 PF05164 Cell division protein ZapA JR895_RS04125 PF03695 Uncharacterised protein family (UPF0149) JR895_RS04130 PF05195 Aminopeptidase P, N-terminal domain JR895_RS04130 PF00557 Metallopeptidase family M24 JR895_RS04135 PF01494 FAD binding domain JR895_RS04140 PF01494 FAD binding domain JR895_RS04150 PF01571 Aminomethyltransferase folate-binding domain JR895_RS04150 PF08669 Glycine cleavage T-protein C-terminal barrel domain JR895_RS04155 PF01597 Glycine cleavage H-protein JR895_RS04160 PF02347 Glycine cleavage system P-protein JR895_RS04170 PF00232 Glycosyl hydrolase family 1 JR895_RS04175 PF04266 ASCH domain JR895_RS04180 PF03006 Haemolysin-III related JR895_RS04185 PF01571 Aminomethyltransferase folate-binding domain JR895_RS04190 PF03937 Flavinator of succinate dehydrogenase JR895_RS04195 PF07254 Membrane-bound toxin component of toxin-antitoxin system JR895_RS04200 PF00258 Flavodoxin JR895_RS04205 PF00589 Phage integrase family JR895_RS04205 PF02899 Phage integrase, N-terminal SAM-like domain JR895_RS04210 PF13098 Thioredoxin-like domain JR895_RS04210 PF10411 Disulfide bond isomerase protein N-terminus JR895_RS04215 PF01368 DHH family JR895_RS04215 PF02272 DHHA1 domain JR895_RS04215 PF17768 RecJ OB domain JR895_RS04225 PF01336 OB-fold nucleic acid binding domain JR895_RS04225 PF00152 tRNA synthetases class II (D, K and N) JR895_RS04230 PF00293 NUDIX domain JR895_RS04245 PF00860 Permease family JR895_RS04250 PF13247 4Fe-4S dicluster domain JR895_RS04250 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JR895_RS04250 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR895_RS04255 PF13247 4Fe-4S dicluster domain JR895_RS04260 PF00860 Permease family JR895_RS04265 PF01979 Amidohydrolase family JR895_RS04270 PF00860 Permease family JR895_RS04275 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JR895_RS04275 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JR895_RS04275 PF01799 [2Fe-2S] binding domain JR895_RS04280 PF00941 FAD binding domain in molybdopterin dehydrogenase JR895_RS04285 PF01979 Amidohydrolase family JR895_RS04290 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR895_RS04290 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JR895_RS04295 PF12804 MobA-like NTP transferase domain JR895_RS04305 PF13478 XdhC Rossmann domain JR895_RS04305 PF02625 XdhC and CoxI family JR895_RS04310 PF00696 Amino acid kinase family JR895_RS04315 PF01979 Amidohydrolase family JR895_RS04320 PF01546 Peptidase family M20/M25/M40 JR895_RS04320 PF07687 Peptidase dimerisation domain JR895_RS04325 PF00291 Pyridoxal-phosphate dependent enzyme JR895_RS04330 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JR895_RS04330 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JR895_RS04335 PF13188 PAS domain JR895_RS04335 PF00158 Sigma-54 interaction domain JR895_RS04335 PF02954 Bacterial regulatory protein, Fis family JR895_RS04340 PF00111 2Fe-2S iron-sulfur cluster binding domain JR895_RS04340 PF01799 [2Fe-2S] binding domain JR895_RS04350 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JR895_RS04350 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JR895_RS04355 PF01551 Peptidase family M23 JR895_RS04355 PF01476 LysM domain JR895_RS04375 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JR895_RS04380 PF00813 FliP family JR895_RS04385 PF01313 Bacterial export proteins, family 3 JR895_RS04390 PF01311 Bacterial export proteins, family 1 JR895_RS04400 PF01312 FlhB HrpN YscU SpaS Family JR895_RS04415 PF09480 Type III secretion system protein PrgH-EprH (PrgH) JR895_RS04420 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF JR895_RS04430 PF01514 Secretory protein of YscJ/FliF family JR895_RS04450 PF00196 Bacterial regulatory proteins, luxR family JR895_RS04450 PF00072 Response regulator receiver domain JR895_RS04455 PF01464 Transglycosylase SLT domain JR895_RS04465 PF00486 Transcriptional regulatory protein, C terminal JR895_RS04470 PF07720 Tetratricopeptide repeat JR895_RS04495 PF00486 Transcriptional regulatory protein, C terminal JR895_RS04500 PF00196 Bacterial regulatory proteins, luxR family JR895_RS04505 PF03222 Tryptophan/tyrosine permease family JR895_RS04510 PF00108 Thiolase, N-terminal domain JR895_RS04510 PF02803 Thiolase, C-terminal domain JR895_RS04515 PF04962 KduI/IolB family JR895_RS04525 PF00083 Sugar (and other) transporter JR895_RS04530 PF01177 Asp/Glu/Hydantoin racemase JR895_RS04535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS04535 PF03466 LysR substrate binding domain JR895_RS04540 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JR895_RS04540 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JR895_RS04545 PF00356 Bacterial regulatory proteins, lacI family JR895_RS04550 PF00501 AMP-binding enzyme JR895_RS04550 PF01553 Acyltransferase JR895_RS04555 PF07690 Major Facilitator Superfamily JR895_RS04560 PF00248 Aldo/keto reductase family JR895_RS04565 PF06004 Bacterial protein of unknown function (DUF903) JR895_RS04570 PF03741 Integral membrane protein TerC family JR895_RS04575 PF02976 DNA mismatch repair enzyme MutH JR895_RS04580 PF00293 NUDIX domain JR895_RS04585 PF02896 PEP-utilising enzyme, TIM barrel domain JR895_RS04585 PF00391 PEP-utilising enzyme, mobile domain JR895_RS04585 PF01590 GAF domain JR895_RS04585 PF05524 PEP-utilising enzyme, N-terminal JR895_RS04590 PF01790 Prolipoprotein diacylglyceryl transferase JR895_RS04595 PF00303 Thymidylate synthase JR895_RS04600 PF07963 Prokaryotic N-terminal methylation motif JR895_RS04605 PF07963 Prokaryotic N-terminal methylation motif JR895_RS04610 PF10713 Protein of unknown function (DUF2509) JR895_RS04615 PF12528 Type II secretion prepilin peptidase dependent protein C JR895_RS04615 PF07963 Prokaryotic N-terminal methylation motif JR895_RS04620 PF17946 RecC C-terminal domain JR895_RS04625 PF00675 Insulinase (Peptidase family M16) JR895_RS04625 PF16187 Middle or third domain of peptidase_M16 JR895_RS04625 PF05193 Peptidase M16 inactive domain JR895_RS04630 PF00580 UvrD/REP helicase N-terminal domain JR895_RS04630 PF12705 PD-(D/E)XK nuclease superfamily JR895_RS04630 PF13361 UvrD-like helicase C-terminal domain JR895_RS04635 PF13538 UvrD-like helicase C-terminal domain JR895_RS04640 PF00696 Amino acid kinase family JR895_RS04640 PF00583 Acetyltransferase (GNAT) family JR895_RS04645 PF01520 N-acetylmuramoyl-L-alanine amidase JR895_RS04645 PF11741 AMIN domain JR895_RS04665 PF03562 MltA specific insert domain JR895_RS04665 PF06725 3D domain JR895_RS04670 PF00899 ThiF family JR895_RS04675 PF02657 Fe-S metabolism associated domain JR895_RS04680 PF00266 Aminotransferase class-V JR895_RS04685 PF06004 Bacterial protein of unknown function (DUF903) JR895_RS04690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS04690 PF03466 LysR substrate binding domain JR895_RS04695 PF04241 Protein of unknown function (DUF423) JR895_RS04700 PF01728 FtsJ-like methyltransferase JR895_RS04700 PF18125 RlmM ferredoxin-like domain JR895_RS04705 PF00455 DeoR C terminal sensor domain JR895_RS04705 PF08220 DeoR-like helix-turn-helix domain JR895_RS04710 PF05025 RbsD / FucU transport protein family JR895_RS04715 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JR895_RS04715 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JR895_RS04720 PF07882 L-fucose isomerase, second N-terminal domain JR895_RS04720 PF02952 L-fucose isomerase, C-terminal domain JR895_RS04720 PF07881 L-fucose isomerase, first N-terminal domain JR895_RS04725 PF07690 Major Facilitator Superfamily JR895_RS04730 PF00596 Class II Aldolase and Adducin N-terminal domain JR895_RS04735 PF00465 Iron-containing alcohol dehydrogenase JR895_RS04740 PF01367 5'-3' exonuclease, C-terminal SAM fold JR895_RS04740 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JR895_RS04745 PF03315 Serine dehydratase beta chain JR895_RS04745 PF03313 Serine dehydratase alpha chain JR895_RS04755 PF11892 Domain of unknown function (DUF3412) JR895_RS04755 PF03641 Possible lysine decarboxylase JR895_RS04755 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases JR895_RS04760 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JR895_RS04760 PF14489 QueF-like protein JR895_RS04765 PF07348 Syd protein (SUKH-2) JR895_RS04770 PF04287 tRNA pseudouridine synthase C JR895_RS04775 PF00849 RNA pseudouridylate synthase JR895_RS04780 PF00258 Flavodoxin JR895_RS04785 PF07690 Major Facilitator Superfamily JR895_RS04790 PF13378 Enolase C-terminal domain-like JR895_RS04790 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JR895_RS04795 PF13378 Enolase C-terminal domain-like JR895_RS04800 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS04800 PF01627 Hpt domain JR895_RS04800 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JR895_RS04800 PF00072 Response regulator receiver domain JR895_RS04800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS04800 PF00672 HAMP domain JR895_RS04805 PF01938 TRAM domain JR895_RS04805 PF05958 tRNA (Uracil-5-)-methyltransferase JR895_RS04810 PF13291 ACT domain JR895_RS04810 PF04607 Region found in RelA / SpoT proteins JR895_RS04810 PF02824 TGS domain JR895_RS04815 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JR895_RS04820 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JR895_RS04825 PF03819 MazG nucleotide pyrophosphohydrolase domain JR895_RS04830 PF00117 Glutamine amidotransferase class-I JR895_RS04830 PF06418 CTP synthase N-terminus JR895_RS04835 PF00113 Enolase, C-terminal TIM barrel domain JR895_RS04835 PF03952 Enolase, N-terminal domain JR895_RS04840 PF04536 TPM domain JR895_RS04850 PF04055 Radical SAM superfamily JR895_RS04855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JR895_RS04855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JR895_RS04860 PF07690 Major Facilitator Superfamily JR895_RS04870 PF01565 FAD binding domain JR895_RS04870 PF02913 FAD linked oxidases, C-terminal domain JR895_RS04875 PF00083 Sugar (and other) transporter JR895_RS04880 PF01012 Electron transfer flavoprotein domain JR895_RS04885 PF01012 Electron transfer flavoprotein domain JR895_RS04885 PF00766 Electron transfer flavoprotein FAD-binding domain JR895_RS04890 PF04309 Glycerol-3-phosphate responsive antiterminator JR895_RS04900 PF01266 FAD dependent oxidoreductase JR895_RS04905 PF01242 6-pyruvoyl tetrahydropterin synthase JR895_RS04910 PF00175 Oxidoreductase NAD-binding domain JR895_RS04910 PF00258 Flavodoxin JR895_RS04910 PF00667 FAD binding domain JR895_RS04915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JR895_RS04915 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JR895_RS04920 PF01507 Phosphoadenosine phosphosulfate reductase family JR895_RS04925 PF00270 DEAD/DEAH box helicase JR895_RS04925 PF00271 Helicase conserved C-terminal domain JR895_RS04925 PF18019 HD domain JR895_RS04930 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) JR895_RS04935 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) JR895_RS04940 PF09344 CT1975-like protein JR895_RS04945 PF09704 CRISPR-associated protein (Cas_Cas5) JR895_RS04950 PF08798 CRISPR associated protein JR895_RS04955 PF01867 CRISPR associated protein Cas1 JR895_RS04960 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) JR895_RS04965 PF04389 Peptidase family M28 JR895_RS04970 PF01507 Phosphoadenosine phosphosulfate reductase family JR895_RS04975 PF00009 Elongation factor Tu GTP binding domain JR895_RS04985 PF12084 Protein of unknown function (DUF3561) JR895_RS04990 PF04977 Septum formation initiator JR895_RS04995 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JR895_RS05000 PF02542 YgbB family JR895_RS05005 PF01142 tRNA pseudouridine synthase D (TruD) JR895_RS05010 PF01975 Survival protein SurE JR895_RS05020 PF01551 Peptidase family M23 JR895_RS05020 PF01476 LysM domain JR895_RS05025 PF04545 Sigma-70, region 4 JR895_RS05025 PF04542 Sigma-70 region 2 JR895_RS05025 PF00140 Sigma-70 factor, region 1.2 JR895_RS05025 PF04539 Sigma-70 region 3 JR895_RS05030 PF02447 GntP family permease JR895_RS05035 PF01261 Xylose isomerase-like TIM barrel JR895_RS05040 PF00596 Class II Aldolase and Adducin N-terminal domain JR895_RS05045 PF17042 Nucleotide-binding C-terminal domain JR895_RS05045 PF07005 Sugar-binding N-terminal domain JR895_RS05050 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JR895_RS05050 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JR895_RS05055 PF00455 DeoR C terminal sensor domain JR895_RS05055 PF08220 DeoR-like helix-turn-helix domain JR895_RS05060 PF00149 Calcineurin-like phosphoesterase JR895_RS05065 PF01624 MutS domain I JR895_RS05065 PF05190 MutS family domain IV JR895_RS05065 PF05188 MutS domain II JR895_RS05065 PF05192 MutS domain III JR895_RS05065 PF00488 MutS domain V JR895_RS05075 PF11756 Nitrous oxide-stimulated promoter JR895_RS05080 PF01590 GAF domain JR895_RS05080 PF00158 Sigma-54 interaction domain JR895_RS05085 PF02769 AIR synthase related protein, C-terminal domain JR895_RS05085 PF00586 AIR synthase related protein, N-terminal domain JR895_RS05090 PF01924 Hydrogenase formation hypA family JR895_RS05095 PF01455 HupF/HypC family JR895_RS05100 PF02492 CobW/HypB/UreG, nucleotide-binding domain JR895_RS05105 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA JR895_RS05110 PF11046 Transcriptional repressor of hyc and hyp operons JR895_RS05115 PF13247 4Fe-4S dicluster domain JR895_RS05120 PF00361 Proton-conducting membrane transporter JR895_RS05125 PF00146 NADH dehydrogenase JR895_RS05130 PF00374 Nickel-dependent hydrogenase JR895_RS05130 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JR895_RS05130 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JR895_RS05135 PF12838 4Fe-4S dicluster domain JR895_RS05140 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JR895_RS05145 PF07450 Formate hydrogenlyase maturation protein HycH JR895_RS05150 PF01750 Hydrogenase maturation protease JR895_RS05155 PF00232 Glycosyl hydrolase family 1 JR895_RS05160 PF02378 Phosphotransferase system, EIIC JR895_RS05160 PF00367 phosphotransferase system, EIIB JR895_RS05165 PF00356 Bacterial regulatory proteins, lacI family JR895_RS05170 PF12800 4Fe-4S binding domain JR895_RS05170 PF13247 4Fe-4S dicluster domain JR895_RS05175 PF07503 HypF finger JR895_RS05175 PF17788 HypF Kae1-like domain JR895_RS05175 PF00708 Acylphosphatase JR895_RS05175 PF01300 Telomere recombination JR895_RS05180 PF18113 Rubredoxin binding C-terminal domain JR895_RS05180 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR895_RS05185 PF00258 Flavodoxin JR895_RS05185 PF00753 Metallo-beta-lactamase superfamily JR895_RS05185 PF00301 Rubredoxin JR895_RS05190 PF01590 GAF domain JR895_RS05190 PF00158 Sigma-54 interaction domain JR895_RS05195 PF01380 SIS domain JR895_RS05195 PF00571 CBS domain JR895_RS05200 PF00455 DeoR C terminal sensor domain JR895_RS05200 PF08220 DeoR-like helix-turn-helix domain JR895_RS05205 PF06923 Glucitol operon activator protein (GutM) JR895_RS05210 PF00106 short chain dehydrogenase JR895_RS05215 PF03829 PTS system glucitol/sorbitol-specific IIA component JR895_RS05220 PF07663 Sorbitol phosphotransferase enzyme II C-terminus JR895_RS05220 PF03612 Sorbitol phosphotransferase enzyme II N-terminus JR895_RS05225 PF03608 PTS system enzyme II sorbitol-specific factor JR895_RS05230 PF13406 Transglycosylase SLT domain JR895_RS05235 PF02464 Competence-damaged protein JR895_RS05240 PF00154 recA bacterial DNA recombination protein JR895_RS05245 PF02631 RecX family JR895_RS05250 PF02272 DHHA1 domain JR895_RS05250 PF01411 tRNA synthetases class II (A) JR895_RS05250 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JR895_RS05255 PF02599 Global regulator protein family JR895_RS05285 PF13419 Haloacid dehalogenase-like hydrolase JR895_RS05290 PF09335 SNARE associated Golgi protein JR895_RS05295 PF04262 Glutamate-cysteine ligase JR895_RS05300 PF02664 S-Ribosylhomocysteinase (LuxS) JR895_RS05305 PF07690 Major Facilitator Superfamily JR895_RS05310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JR895_RS05310 PF00529 HlyD membrane-fusion protein of T1SS JR895_RS05315 PF01047 MarR family JR895_RS05320 PF05437 Branched-chain amino acid transport protein (AzlD) JR895_RS05325 PF03591 AzlC protein JR895_RS05330 PF07690 Major Facilitator Superfamily JR895_RS05340 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JR895_RS05345 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS05350 PF00571 CBS domain JR895_RS05350 PF00005 ABC transporter JR895_RS05355 PF00268 Ribonucleotide reductase, small chain JR895_RS05360 PF00317 Ribonucleotide reductase, all-alpha domain JR895_RS05360 PF08343 Ribonucleotide reductase N-terminal JR895_RS05360 PF02867 Ribonucleotide reductase, barrel domain JR895_RS05365 PF07972 NrdI Flavodoxin like JR895_RS05370 PF00462 Glutaredoxin JR895_RS05375 PF05957 Bacterial protein of unknown function (DUF883) JR895_RS05380 PF09400 Protein of unknown function (DUF2002) JR895_RS05385 PF06610 L-alanine exporter JR895_RS05390 PF00816 H-NS histone family JR895_RS05395 PF00581 Rhodanese-like domain JR895_RS05395 PF11127 Protein of unknown function (DUF2892) JR895_RS05400 PF01022 Bacterial regulatory protein, arsR family JR895_RS05405 PF01679 Proteolipid membrane potential modulator JR895_RS05410 PF01476 LysM domain JR895_RS05410 PF04972 BON domain JR895_RS05415 PF07729 FCD domain JR895_RS05415 PF00392 Bacterial regulatory proteins, gntR family JR895_RS05420 PF00324 Amino acid permease JR895_RS05425 PF00202 Aminotransferase class-III JR895_RS05430 PF00171 Aldehyde dehydrogenase family JR895_RS05435 PF01266 FAD dependent oxidoreductase JR895_RS05440 PF08943 CsiD JR895_RS05470 PF03212 Pertactin JR895_RS05470 PF03797 Autotransporter beta-domain JR895_RS05470 PF16168 Adhesin of bacterial autotransporter system, probable stalk JR895_RS05480 PF00580 UvrD/REP helicase N-terminal domain JR895_RS05480 PF13361 UvrD-like helicase C-terminal domain JR895_RS05570 PF18766 SWI2/SNF2 ATPase JR895_RS05570 PF11867 Domain of unknown function (DUF3387) JR895_RS05570 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JR895_RS05580 PF02384 N-6 DNA Methylase JR895_RS05590 PF13356 Arm DNA-binding domain JR895_RS05590 PF00589 Phage integrase family JR895_RS05600 PF01668 SmpB protein JR895_RS05605 PF03364 Polyketide cyclase / dehydrase and lipid transport JR895_RS05610 PF03658 RnfH family Ubiquitin JR895_RS05615 PF04355 SmpA / OmlA family JR895_RS05620 PF02463 RecF/RecN/SMC N terminal domain JR895_RS05625 PF01513 ATP-NAD kinase JR895_RS05630 PF01025 GrpE JR895_RS05635 PF00571 CBS domain JR895_RS05635 PF01595 Cyclin M transmembrane N-terminal domain JR895_RS05635 PF03471 Transporter associated domain JR895_RS05640 PF01578 Cytochrome C assembly protein JR895_RS05645 PF00448 SRP54-type protein, GTPase domain JR895_RS05645 PF02881 SRP54-type protein, helical bundle domain JR895_RS05645 PF02978 Signal peptide binding domain JR895_RS05650 PF00886 Ribosomal protein S16 JR895_RS05655 PF05239 PRC-barrel domain JR895_RS05655 PF01782 RimM N-terminal domain JR895_RS05660 PF01746 tRNA (Guanine-1)-methyltransferase JR895_RS05665 PF01245 Ribosomal protein L19 JR895_RS05670 PF00691 OmpA family JR895_RS05675 PF00990 Diguanylate cyclase, GGDEF domain JR895_RS05675 PF17152 Periplasmic sensor domain JR895_RS05680 PF13689 YfiR/HmsC-like JR895_RS05685 PF10973 Protein of unknown function (DUF2799) JR895_RS05690 PF00793 DAHP synthetase I family JR895_RS05695 PF01817 Chorismate mutase type II JR895_RS05695 PF02153 Prephenate dehydrogenase JR895_RS05700 PF00800 Prephenate dehydratase JR895_RS05700 PF01817 Chorismate mutase type II JR895_RS05710 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JR895_RS05715 PF13525 Outer membrane lipoprotein JR895_RS05720 PF00849 RNA pseudouridylate synthase JR895_RS05720 PF01479 S4 domain JR895_RS05725 PF02578 Multi-copper polyphenol oxidoreductase laccase JR895_RS05730 PF00004 ATPase family associated with various cellular activities (AAA) JR895_RS05730 PF07724 AAA domain (Cdc48 subfamily) JR895_RS05730 PF17871 AAA lid domain JR895_RS05730 PF02861 Clp amino terminal domain, pathogenicity island component JR895_RS05730 PF10431 C-terminal, D2-small domain, of ClpB protein JR895_RS05755 PF00083 Sugar (and other) transporter JR895_RS05760 PF10043 Predicted periplasmic lipoprotein (DUF2279) JR895_RS05765 PF13091 PLD-like domain JR895_RS05770 PF13380 CoA binding domain JR895_RS05770 PF13607 Succinyl-CoA ligase like flavodoxin domain JR895_RS05770 PF00583 Acetyltransferase (GNAT) family JR895_RS05775 PF03942 DTW domain JR895_RS05780 PF00085 Thioredoxin JR895_RS05785 PF08032 RNA 2'-O ribose methyltransferase substrate binding JR895_RS05785 PF00588 SpoU rRNA Methylase family JR895_RS05790 PF03167 Uracil DNA glycosylase superfamily JR895_RS05795 PF01228 Glycine radical JR895_RS05800 PF01810 LysE type translocator JR895_RS05805 PF03466 LysR substrate binding domain JR895_RS05805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS05810 PF00270 DEAD/DEAH box helicase JR895_RS05810 PF00271 Helicase conserved C-terminal domain JR895_RS05815 PF05175 Methyltransferase small domain JR895_RS05820 PF00890 FAD binding domain JR895_RS05820 PF02910 Fumarate reductase flavoprotein C-term JR895_RS05830 PF04542 Sigma-70 region 2 JR895_RS05830 PF08281 Sigma-70, region 4 JR895_RS05835 PF03873 Anti sigma-E protein RseA, C-terminal domain JR895_RS05835 PF03872 Anti sigma-E protein RseA, N-terminal domain JR895_RS05840 PF17188 MucB/RseB C-terminal domain JR895_RS05840 PF03888 MucB/RseB N-terminal domain JR895_RS05850 PF06421 GTP-binding protein LepA C-terminus JR895_RS05850 PF00679 Elongation factor G C-terminus JR895_RS05850 PF00009 Elongation factor Tu GTP binding domain JR895_RS05850 PF03144 Elongation factor Tu domain 2 JR895_RS05855 PF10502 Signal peptidase, peptidase S26 JR895_RS05860 PF00035 Double-stranded RNA binding motif JR895_RS05860 PF14622 Ribonuclease-III-like JR895_RS05865 PF07650 KH domain JR895_RS05865 PF01926 50S ribosome-binding GTPase JR895_RS05870 PF02565 Recombination protein O C terminal JR895_RS05870 PF11967 Recombination protein O N terminal JR895_RS05875 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JR895_RS05880 PF01648 4'-phosphopantetheinyl transferase superfamily JR895_RS05890 PF12838 4Fe-4S dicluster domain JR895_RS05895 PF01380 SIS domain JR895_RS05895 PF01418 Helix-turn-helix domain, rpiR family JR895_RS05905 PF14437 MafB19-like deaminase JR895_RS05910 PF00497 Bacterial extracellular solute-binding proteins, family 3 JR895_RS05910 PF01464 Transglycosylase SLT domain JR895_RS05915 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JR895_RS05915 PF02769 AIR synthase related protein, C-terminal domain JR895_RS05915 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JR895_RS05920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS05920 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS05925 PF13942 YfhG lipoprotein JR895_RS05930 PF00072 Response regulator receiver domain JR895_RS05930 PF00158 Sigma-54 interaction domain JR895_RS05935 PF00543 Nitrogen regulatory protein P-II JR895_RS05940 PF00175 Oxidoreductase NAD-binding domain JR895_RS05940 PF00970 Oxidoreductase FAD-binding domain JR895_RS05940 PF00042 Globin JR895_RS05945 PF00464 Serine hydroxymethyltransferase JR895_RS05950 PF00480 ROK family JR895_RS05955 PF13181 Tetratricopeptide repeat JR895_RS05955 PF17128 Domain of unknown function (DUF5107) JR895_RS05960 PF13407 Periplasmic binding protein domain JR895_RS05965 PF00005 ABC transporter JR895_RS05970 PF02653 Branched-chain amino acid transport system / permease component JR895_RS05975 PF08240 Alcohol dehydrogenase GroES-like domain JR895_RS05975 PF00107 Zinc-binding dehydrogenase JR895_RS05980 PF01263 Aldose 1-epimerase JR895_RS05985 PF07681 DoxX JR895_RS05990 PF00665 Integrase core domain JR895_RS05990 PF13936 Helix-turn-helix domain JR895_RS05995 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR895_RS05995 PF14759 Reductase C-terminal JR895_RS06000 PF00106 short chain dehydrogenase JR895_RS06005 PF00355 Rieske [2Fe-2S] domain JR895_RS06010 PF00866 Ring hydroxylating beta subunit JR895_RS06015 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JR895_RS06015 PF00355 Rieske [2Fe-2S] domain JR895_RS06020 PF03466 LysR substrate binding domain JR895_RS06020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS06025 PF12832 MFS_1 like family JR895_RS06030 PF00874 PRD domain JR895_RS06035 PF12146 Serine aminopeptidase, S33 JR895_RS06040 PF00459 Inositol monophosphatase family JR895_RS06045 PF00588 SpoU rRNA Methylase family JR895_RS06050 PF02082 Transcriptional regulator JR895_RS06055 PF00266 Aminotransferase class-V JR895_RS06060 PF01592 NifU-like N terminal domain JR895_RS06065 PF01521 Iron-sulphur cluster biosynthesis JR895_RS06070 PF07743 HSCB C-terminal oligomerisation domain JR895_RS06075 PF00012 Hsp70 protein JR895_RS06080 PF00111 2Fe-2S iron-sulfur cluster binding domain JR895_RS06085 PF04384 Iron-sulphur cluster assembly JR895_RS06090 PF12404 Peptidase JR895_RS06090 PF00883 Cytosol aminopeptidase family, catalytic domain JR895_RS06095 PF07179 SseB protein N-terminal domain JR895_RS06095 PF14581 SseB protein C-terminal domain JR895_RS06100 PF00581 Rhodanese-like domain JR895_RS06105 PF01835 MG2 domain JR895_RS06105 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain JR895_RS06105 PF07703 Alpha-2-macroglobulin bait region domain JR895_RS06105 PF00207 Alpha-2-macroglobulin family JR895_RS06105 PF17962 Bacterial macroglobulin domain 6 JR895_RS06105 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain JR895_RS06105 PF07678 A-macroglobulin TED domain JR895_RS06105 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain JR895_RS06105 PF11974 Bacterial alpha-2-macroglobulin MG3 domain JR895_RS06110 PF00912 Transglycosylase JR895_RS06110 PF06832 Penicillin-Binding Protein C-terminus Family JR895_RS06110 PF00905 Penicillin binding protein transpeptidase domain JR895_RS06115 PF00334 Nucleoside diphosphate kinase JR895_RS06120 PF04055 Radical SAM superfamily JR895_RS06125 PF13464 Domain of unknown function (DUF4115) JR895_RS06130 PF04551 GcpE protein JR895_RS06135 PF03129 Anticodon binding domain JR895_RS06135 PF13393 Histidyl-tRNA synthetase JR895_RS06140 PF09976 Tetratricopeptide repeat-like domain JR895_RS06145 PF13360 PQQ-like domain JR895_RS06150 PF01926 50S ribosome-binding GTPase JR895_RS06150 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JR895_RS06155 PF07191 zinc-ribbons JR895_RS06160 PF13742 OB-fold nucleic acid binding domain JR895_RS06160 PF02601 Exonuclease VII, large subunit JR895_RS06165 PF00478 IMP dehydrogenase / GMP reductase domain JR895_RS06165 PF00571 CBS domain JR895_RS06170 PF00117 Glutamine amidotransferase class-I JR895_RS06170 PF02540 NAD synthase JR895_RS06170 PF00958 GMP synthase C terminal domain JR895_RS06175 PF17358 Family of unknown function (DUF5384) JR895_RS06180 PF05433 Glycine zipper 2TM domain JR895_RS06185 PF11119 Protein of unknown function (DUF2633) JR895_RS06195 PF05231 MASE1 JR895_RS06195 PF00563 EAL domain JR895_RS06200 PF02541 Ppx/GppA phosphatase family JR895_RS06205 PF13090 Polyphosphate kinase C-terminal domain 2 JR895_RS06205 PF13089 Polyphosphate kinase N-terminal domain JR895_RS06205 PF02503 Polyphosphate kinase middle domain JR895_RS06205 PF17941 Polyphosphate kinase C-terminal domain 1 JR895_RS06210 PF00551 Formyl transferase JR895_RS06215 PF00586 AIR synthase related protein, N-terminal domain JR895_RS06215 PF02769 AIR synthase related protein, C-terminal domain JR895_RS06225 PF00860 Permease family JR895_RS06230 PF00308 Bacterial dnaA protein JR895_RS06235 PF03960 ArsC family JR895_RS06240 PF01435 Peptidase family M48 JR895_RS06245 PF01594 AI-2E family transporter JR895_RS06250 PF01226 Formate/nitrite transporter JR895_RS06255 PF01590 GAF domain JR895_RS06255 PF00158 Sigma-54 interaction domain JR895_RS06260 PF07450 Formate hydrogenlyase maturation protein HycH JR895_RS06265 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JR895_RS06270 PF12838 4Fe-4S dicluster domain JR895_RS06275 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JR895_RS06275 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JR895_RS06275 PF00374 Nickel-dependent hydrogenase JR895_RS06280 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JR895_RS06280 PF00361 Proton-conducting membrane transporter JR895_RS06285 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JR895_RS06290 PF00361 Proton-conducting membrane transporter JR895_RS06290 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JR895_RS06295 PF00146 NADH dehydrogenase JR895_RS06305 PF12798 4Fe-4S binding domain JR895_RS06305 PF00037 4Fe-4S binding domain JR895_RS06310 PF00578 AhpC/TSA family JR895_RS06315 PF01842 ACT domain JR895_RS06320 PF00701 Dihydrodipicolinate synthetase family JR895_RS06325 PF06804 NlpB/DapX lipoprotein JR895_RS06330 PF01259 SAICAR synthetase JR895_RS06335 PF04228 Putative neutral zinc metallopeptidase JR895_RS06340 PF05127 Helicase JR895_RS06340 PF17176 tRNA-binding domain JR895_RS06340 PF08351 Domain of unknown function (DUF1726) JR895_RS06340 PF13718 GNAT acetyltransferase 2 JR895_RS06345 PF02230 Phospholipase/Carboxylesterase JR895_RS06350 PF13980 Uncharacterised protein family (UPF0370) JR895_RS06355 PF01546 Peptidase family M20/M25/M40 JR895_RS06355 PF07687 Peptidase dimerisation domain JR895_RS06360 PF03960 ArsC family JR895_RS06370 PF00873 AcrB/AcrD/AcrF family JR895_RS06375 PF00672 HAMP domain JR895_RS06375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS06375 PF07730 Histidine kinase JR895_RS06375 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JR895_RS06380 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JR895_RS06380 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR895_RS06380 PF13247 4Fe-4S dicluster domain JR895_RS06385 PF00293 NUDIX domain JR895_RS06390 PF06674 Protein of unknown function (DUF1176) JR895_RS06395 PF00456 Transketolase, thiamine diphosphate binding domain JR895_RS06395 PF02780 Transketolase, C-terminal domain JR895_RS06395 PF02779 Transketolase, pyrimidine binding domain JR895_RS06400 PF00923 Transaldolase/Fructose-6-phosphate aldolase JR895_RS06405 PF01515 Phosphate acetyl/butaryl transferase JR895_RS06405 PF03949 Malic enzyme, NAD binding domain JR895_RS06405 PF00390 Malic enzyme, N-terminal domain JR895_RS06410 PF00936 BMC domain JR895_RS06415 PF10662 Ethanolamine utilisation - propanediol utilisation JR895_RS06420 PF06249 Ethanolamine utilisation protein EutQ JR895_RS06425 PF01923 Cobalamin adenosyltransferase JR895_RS06430 PF01515 Phosphate acetyl/butaryl transferase JR895_RS06435 PF00936 BMC domain JR895_RS06440 PF03319 Ethanolamine utilisation protein EutN/carboxysome JR895_RS06445 PF00171 Aldehyde dehydrogenase family JR895_RS06455 PF00465 Iron-containing alcohol dehydrogenase JR895_RS06460 PF04346 Ethanolamine utilisation protein, EutH JR895_RS06465 PF06277 Ethanolamine utilisation protein EutA JR895_RS06475 PF01177 Asp/Glu/Hydantoin racemase JR895_RS06480 PF13520 Amino acid permease JR895_RS06485 PF00282 Pyridoxal-dependent decarboxylase conserved domain JR895_RS06490 PF00282 Pyridoxal-dependent decarboxylase conserved domain JR895_RS06530 PF12833 Helix-turn-helix domain JR895_RS06535 PF01218 Coproporphyrinogen III oxidase JR895_RS06540 PF01520 N-acetylmuramoyl-L-alanine amidase JR895_RS06545 PF00583 Acetyltransferase (GNAT) family JR895_RS06550 PF11143 Protein of unknown function (DUF2919) JR895_RS06555 PF06572 Protein of unknown function (DUF1131) JR895_RS06560 PF04261 Dyp-type peroxidase family JR895_RS06565 PF00144 Beta-lactamase JR895_RS06570 PF00367 phosphotransferase system, EIIB JR895_RS06570 PF02378 Phosphotransferase system, EIIC JR895_RS06575 PF01380 SIS domain JR895_RS06580 PF01380 SIS domain JR895_RS06580 PF01418 Helix-turn-helix domain, rpiR family JR895_RS06595 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS06600 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS06605 PF00005 ABC transporter JR895_RS06610 PF00291 Pyridoxal-phosphate dependent enzyme JR895_RS06615 PF17263 Family of unknown function (DUF5329) JR895_RS06620 PF08543 Phosphomethylpyrimidine kinase JR895_RS06625 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JR895_RS06630 PF00391 PEP-utilising enzyme, mobile domain JR895_RS06630 PF05524 PEP-utilising enzyme, N-terminal JR895_RS06630 PF02896 PEP-utilising enzyme, TIM barrel domain JR895_RS06635 PF00381 PTS HPr component phosphorylation site JR895_RS06640 PF00291 Pyridoxal-phosphate dependent enzyme JR895_RS06650 PF04354 ZipA, C-terminal FtsZ-binding domain JR895_RS06655 PF12826 Helix-hairpin-helix motif JR895_RS06655 PF00533 BRCA1 C Terminus (BRCT) domain JR895_RS06655 PF01653 NAD-dependent DNA ligase adenylation domain JR895_RS06655 PF03120 NAD-dependent DNA ligase OB-fold domain JR895_RS06655 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JR895_RS06660 PF12843 Putative quorum-sensing-regulated virulence factor JR895_RS06665 PF13593 SBF-like CPA transporter family (DUF4137) JR895_RS06670 PF03466 LysR substrate binding domain JR895_RS06670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS06675 PF03502 Nucleoside-specific channel-forming protein, Tsx JR895_RS06680 PF01048 Phosphorylase superfamily JR895_RS06685 PF03825 Nucleoside H+ symporter JR895_RS06695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS06695 PF03466 LysR substrate binding domain JR895_RS06725 PF00749 tRNA synthetases class I (E and Q), catalytic domain JR895_RS06730 PF07037 Putative transcription regulator (DUF1323) JR895_RS06735 PF07037 Putative transcription regulator (DUF1323) JR895_RS06750 PF05231 MASE1 JR895_RS06750 PF00563 EAL domain JR895_RS06755 PF01609 Transposase DDE domain JR895_RS06760 PF07670 Nucleoside recognition JR895_RS06760 PF07662 Na+ dependent nucleoside transporter C-terminus JR895_RS06760 PF01773 Na+ dependent nucleoside transporter N-terminus JR895_RS06765 PF01566 Natural resistance-associated macrophage protein JR895_RS06770 PF10697 Protein of unknown function (DUF2502) JR895_RS06775 PF00654 Voltage gated chloride channel JR895_RS06780 PF02685 Glucokinase JR895_RS06785 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JR895_RS06790 PF02378 Phosphotransferase system, EIIC JR895_RS06795 PF01321 Creatinase/Prolidase N-terminal domain JR895_RS06795 PF00557 Metallopeptidase family M24 JR895_RS06800 PF05343 M42 glutamyl aminopeptidase JR895_RS06805 PF00391 PEP-utilising enzyme, mobile domain JR895_RS06805 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JR895_RS06805 PF00381 PTS HPr component phosphorylation site JR895_RS06805 PF02896 PEP-utilising enzyme, TIM barrel domain JR895_RS06805 PF05524 PEP-utilising enzyme, N-terminal JR895_RS06810 PF12833 Helix-turn-helix domain JR895_RS06815 PF04397 LytTr DNA-binding domain JR895_RS06815 PF00072 Response regulator receiver domain JR895_RS06820 PF06580 Histidine kinase JR895_RS06820 PF07694 5TMR of 5TMR-LYT JR895_RS06820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS06825 PF00155 Aminotransferase class I and II JR895_RS06835 PF03279 Bacterial lipid A biosynthesis acyltransferase JR895_RS06840 PF10810 Protein of unknown function (DUF2545) JR895_RS06850 PF10938 YfdX protein JR895_RS06855 PF02515 CoA-transferase family III JR895_RS06860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JR895_RS06860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JR895_RS06860 PF00205 Thiamine pyrophosphate enzyme, central domain JR895_RS06865 PF03547 Membrane transport protein JR895_RS06870 PF02515 CoA-transferase family III JR895_RS06875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS06875 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS06875 PF01627 Hpt domain JR895_RS06875 PF00072 Response regulator receiver domain JR895_RS06875 PF00497 Bacterial extracellular solute-binding proteins, family 3 JR895_RS06880 PF00196 Bacterial regulatory proteins, luxR family JR895_RS06880 PF00072 Response regulator receiver domain JR895_RS06885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JR895_RS06885 PF00529 HlyD membrane-fusion protein of T1SS JR895_RS06890 PF07690 Major Facilitator Superfamily JR895_RS06895 PF00291 Pyridoxal-phosphate dependent enzyme JR895_RS06905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS06905 PF03466 LysR substrate binding domain JR895_RS06915 PF01226 Formate/nitrite transporter JR895_RS06920 PF04333 MlaA lipoprotein JR895_RS06930 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JR895_RS06935 PF04175 Protein of unknown function (DUF406) JR895_RS06940 PF00108 Thiolase, N-terminal domain JR895_RS06940 PF02803 Thiolase, C-terminal domain JR895_RS06945 PF00378 Enoyl-CoA hydratase/isomerase JR895_RS06945 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JR895_RS06945 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JR895_RS06950 PF00300 Histidine phosphatase superfamily (branch 1) JR895_RS06955 PF00419 Fimbrial protein JR895_RS06960 PF13953 PapC C-terminal domain JR895_RS06960 PF13954 PapC N-terminal domain JR895_RS06960 PF00577 Outer membrane usher protein JR895_RS06965 PF02753 Pili assembly chaperone PapD, C-terminal domain JR895_RS06965 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JR895_RS06970 PF00419 Fimbrial protein JR895_RS06975 PF00419 Fimbrial protein JR895_RS06980 PF00419 Fimbrial protein JR895_RS06985 PF11245 Protein of unknown function (DUF2544) JR895_RS06990 PF01713 Smr domain JR895_RS06995 PF05175 Methyltransferase small domain JR895_RS07000 PF01264 Chorismate synthase JR895_RS07005 PF03411 Penicillin-insensitive murein endopeptidase JR895_RS07010 PF01925 Sulfite exporter TauE/SafE JR895_RS07015 PF04315 Elongation factor P hydroxylase JR895_RS07020 PF08891 YfcL protein JR895_RS07025 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JR895_RS07025 PF01266 FAD dependent oxidoreductase JR895_RS07030 PF00109 Beta-ketoacyl synthase, N-terminal domain JR895_RS07030 PF02801 Beta-ketoacyl synthase, C-terminal domain JR895_RS07035 PF07690 Major Facilitator Superfamily JR895_RS07045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JR895_RS07045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JR895_RS07045 PF11890 Domain of unknown function (DUF3410) JR895_RS07050 PF02774 Semialdehyde dehydrogenase, dimerisation domain JR895_RS07050 PF01118 Semialdehyde dehydrogenase, NAD binding domain JR895_RS07055 PF01416 tRNA pseudouridine synthase JR895_RS07060 PF09335 SNARE associated Golgi protein JR895_RS07065 PF01039 Carboxyl transferase domain JR895_RS07065 PF17848 Acetyl-coA carboxylase zinc finger domain JR895_RS07070 PF08245 Mur ligase middle domain JR895_RS07070 PF02875 Mur ligase family, glutamate ligase domain JR895_RS07075 PF05036 Sporulation related domain JR895_RS07080 PF02674 Colicin V production protein JR895_RS07085 PF00156 Phosphoribosyl transferase domain JR895_RS07090 PF02441 Flavoprotein JR895_RS07095 PF00497 Bacterial extracellular solute-binding proteins, family 3 JR895_RS07100 PF00497 Bacterial extracellular solute-binding proteins, family 3 JR895_RS07105 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS07110 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS07115 PF00005 ABC transporter JR895_RS07120 PF04754 Putative transposase, YhgA-like JR895_RS07125 PF01370 NAD dependent epimerase/dehydratase family JR895_RS07125 PF08338 Domain of unknown function (DUF1731) JR895_RS07130 PF02152 Dihydroneopterin aldolase JR895_RS07135 PF00043 Glutathione S-transferase, C-terminal domain JR895_RS07135 PF02798 Glutathione S-transferase, N-terminal domain JR895_RS07140 PF02798 Glutathione S-transferase, N-terminal domain JR895_RS07140 PF14834 Glutathione S-transferase, C-terminal domain JR895_RS07145 PF12850 Calcineurin-like phosphoesterase superfamily domain JR895_RS07150 PF00293 NUDIX domain JR895_RS07155 PF03606 C4-dicarboxylate anaerobic carrier JR895_RS07160 PF07085 DRTGG domain JR895_RS07160 PF01515 Phosphate acetyl/butaryl transferase JR895_RS07165 PF00871 Acetokinase family JR895_RS07170 PF04217 Protein of unknown function, DUF412 JR895_RS07175 PF03887 YfbU domain JR895_RS07180 PF13419 Haloacid dehalogenase-like hydrolase JR895_RS07185 PF03600 Citrate transporter JR895_RS07185 PF02080 TrkA-C domain JR895_RS07195 PF00155 Aminotransferase class I and II JR895_RS07200 PF03466 LysR substrate binding domain JR895_RS07200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS07205 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JR895_RS07210 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JR895_RS07215 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JR895_RS07215 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JR895_RS07225 PF10531 SLBB domain JR895_RS07225 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JR895_RS07225 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JR895_RS07230 PF01568 Molydopterin dinucleotide binding domain JR895_RS07230 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JR895_RS07230 PF00384 Molybdopterin oxidoreductase JR895_RS07230 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JR895_RS07235 PF00146 NADH dehydrogenase JR895_RS07240 PF12838 4Fe-4S dicluster domain JR895_RS07245 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JR895_RS07250 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JR895_RS07255 PF00361 Proton-conducting membrane transporter JR895_RS07255 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JR895_RS07260 PF00361 Proton-conducting membrane transporter JR895_RS07265 PF00361 Proton-conducting membrane transporter JR895_RS07270 PF08974 Domain of unknown function (DUF1877) JR895_RS07280 PF02902 Ulp1 protease family, C-terminal catalytic domain JR895_RS07285 PF12706 Beta-lactamase superfamily domain JR895_RS07290 PF13673 Acetyltransferase (GNAT) domain JR895_RS07295 PF05957 Bacterial protein of unknown function (DUF883) JR895_RS07300 PF00425 chorismate binding enzyme JR895_RS07305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JR895_RS07305 PF16582 Middle domain of thiamine pyrophosphate JR895_RS07305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JR895_RS07310 PF12697 Alpha/beta hydrolase family JR895_RS07315 PF00378 Enoyl-CoA hydratase/isomerase JR895_RS07320 PF13378 Enolase C-terminal domain-like JR895_RS07325 PF00501 AMP-binding enzyme JR895_RS07325 PF13193 AMP-binding enzyme C-terminal domain JR895_RS07340 PF00892 EamA-like transporter family JR895_RS07345 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JR895_RS07350 PF01522 Polysaccharide deacetylase JR895_RS07355 PF00551 Formyl transferase JR895_RS07355 PF01370 NAD dependent epimerase/dehydratase family JR895_RS07355 PF02911 Formyl transferase, C-terminal domain JR895_RS07360 PF00535 Glycosyl transferase family 2 JR895_RS07365 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JR895_RS07370 PF00300 Histidine phosphatase superfamily (branch 1) JR895_RS07375 PF00293 NUDIX domain JR895_RS07380 PF07437 YfaZ precursor JR895_RS07385 PF00994 Probable molybdopterin binding domain JR895_RS07390 PF09339 IclR helix-turn-helix domain JR895_RS07390 PF01614 Bacterial transcriptional regulator JR895_RS07395 PF13378 Enolase C-terminal domain-like JR895_RS07395 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JR895_RS07400 PF07690 Major Facilitator Superfamily JR895_RS07405 PF03328 HpcH/HpaI aldolase/citrate lyase family JR895_RS07415 PF04754 Putative transposase, YhgA-like JR895_RS07420 PF13183 4Fe-4S dicluster domain JR895_RS07420 PF02754 Cysteine-rich domain JR895_RS07425 PF00890 FAD binding domain JR895_RS07430 PF01266 FAD dependent oxidoreductase JR895_RS07430 PF04324 BFD-like [2Fe-2S] binding domain JR895_RS07435 PF07690 Major Facilitator Superfamily JR895_RS07440 PF03009 Glycerophosphoryl diester phosphodiesterase family JR895_RS07455 PF00111 2Fe-2S iron-sulfur cluster binding domain JR895_RS07460 PF00268 Ribonucleotide reductase, small chain JR895_RS07465 PF03477 ATP cone domain JR895_RS07465 PF02867 Ribonucleotide reductase, barrel domain JR895_RS07465 PF00317 Ribonucleotide reductase, all-alpha domain JR895_RS07470 PF12951 Passenger-associated-transport-repeat JR895_RS07470 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat JR895_RS07470 PF03797 Autotransporter beta-domain JR895_RS07480 PF00521 DNA gyrase/topoisomerase IV, subunit A JR895_RS07480 PF03989 DNA gyrase C-terminal domain, beta-propeller JR895_RS07485 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) JR895_RS07490 PF06672 Protein of unknown function (DUF1175) JR895_RS07495 PF07703 Alpha-2-macroglobulin bait region domain JR895_RS07495 PF00207 Alpha-2-macroglobulin family JR895_RS07495 PF01835 MG2 domain JR895_RS07500 PF10062 Predicted secreted protein (DUF2300) JR895_RS07500 PF08486 Stage II sporulation protein JR895_RS07505 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) JR895_RS07510 PF00108 Thiolase, N-terminal domain JR895_RS07510 PF02803 Thiolase, C-terminal domain JR895_RS07515 PF02667 Short chain fatty acid transporter JR895_RS07520 PF01144 Coenzyme A transferase JR895_RS07525 PF01144 Coenzyme A transferase JR895_RS07530 PF00158 Sigma-54 interaction domain JR895_RS07530 PF02954 Bacterial regulatory protein, Fis family JR895_RS07530 PF00072 Response regulator receiver domain JR895_RS07535 PF00989 PAS fold JR895_RS07535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS07535 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS07540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS07540 PF09456 RcsC Alpha-Beta-Loop (ABL) JR895_RS07540 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS07540 PF00072 Response regulator receiver domain JR895_RS07545 PF00196 Bacterial regulatory proteins, luxR family JR895_RS07545 PF00072 Response regulator receiver domain JR895_RS07550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS07550 PF16359 RcsD-ABL domain JR895_RS07550 PF01627 Hpt domain JR895_RS07555 PF00267 Gram-negative porin JR895_RS07560 PF02424 ApbE family JR895_RS07565 PF12833 Helix-turn-helix domain JR895_RS07565 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JR895_RS07565 PF02805 Metal binding domain of Ada JR895_RS07565 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JR895_RS07570 PF13532 2OG-Fe(II) oxygenase superfamily JR895_RS07575 PF00005 ABC transporter JR895_RS07580 PF06039 Malate:quinone oxidoreductase (Mqo) JR895_RS07585 PF03974 Ecotin JR895_RS07590 PF12800 4Fe-4S binding domain JR895_RS07590 PF00037 4Fe-4S binding domain JR895_RS07590 PF13187 4Fe-4S dicluster domain JR895_RS07595 PF03927 NapD protein JR895_RS07600 PF00384 Molybdopterin oxidoreductase JR895_RS07600 PF01568 Molydopterin dinucleotide binding domain JR895_RS07600 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JR895_RS07605 PF12800 4Fe-4S binding domain JR895_RS07605 PF12838 4Fe-4S dicluster domain JR895_RS07610 PF13237 4Fe-4S dicluster domain JR895_RS07610 PF12801 4Fe-4S binding domain JR895_RS07615 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) JR895_RS07620 PF03264 NapC/NirT cytochrome c family, N-terminal region JR895_RS07625 PF00005 ABC transporter JR895_RS07630 PF03379 CcmB protein JR895_RS07635 PF01578 Cytochrome C assembly protein JR895_RS07640 PF04995 Heme exporter protein D (CcmD) JR895_RS07645 PF03100 CcmE JR895_RS07650 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JR895_RS07650 PF01578 Cytochrome C assembly protein JR895_RS07655 PF08534 Redoxin JR895_RS07660 PF03918 Cytochrome C biogenesis protein JR895_RS07665 PF00072 Response regulator receiver domain JR895_RS07665 PF00196 Bacterial regulatory proteins, luxR family JR895_RS07670 PF03797 Autotransporter beta-domain JR895_RS07670 PF03212 Pertactin JR895_RS07670 PF16168 Adhesin of bacterial autotransporter system, probable stalk JR895_RS07680 PF00884 Sulfatase JR895_RS07680 PF11893 Domain of unknown function (DUF3413) JR895_RS07685 PF07208 Protein of unknown function (DUF1414) JR895_RS07690 PF04245 37-kD nucleoid-associated bacterial protein JR895_RS07695 PF01386 Ribosomal L25p family JR895_RS07700 PF00271 Helicase conserved C-terminal domain JR895_RS07700 PF04851 Type III restriction enzyme, res subunit JR895_RS07705 PF00849 RNA pseudouridylate synthase JR895_RS07705 PF01479 S4 domain JR895_RS07710 PF07690 Major Facilitator Superfamily JR895_RS07715 PF13989 YejG-like protein JR895_RS07720 PF00005 ABC transporter JR895_RS07720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JR895_RS07725 PF12911 N-terminal TM domain of oligopeptide transport permease C JR895_RS07725 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS07730 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS07735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JR895_RS07740 PF00563 EAL domain JR895_RS07740 PF12792 CSS motif domain associated with EAL JR895_RS07745 PF00877 NlpC/P60 family JR895_RS07750 PF01569 PAP2 superfamily JR895_RS07755 PF02492 CobW/HypB/UreG, nucleotide-binding domain JR895_RS07755 PF07683 Cobalamin synthesis protein cobW C-terminal domain JR895_RS07760 PF01232 Mannitol dehydrogenase Rossmann domain JR895_RS07760 PF08125 Mannitol dehydrogenase C-terminal domain JR895_RS07765 PF08207 Elongation factor P (EF-P) KOW-like domain JR895_RS07765 PF09285 Elongation factor P, C-terminal JR895_RS07765 PF01132 Elongation factor P (EF-P) OB domain JR895_RS07770 PF03692 Putative zinc- or iron-chelating domain JR895_RS07775 PF07690 Major Facilitator Superfamily JR895_RS07780 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JR895_RS07780 PF00381 PTS HPr component phosphorylation site JR895_RS07785 PF00294 pfkB family carbohydrate kinase JR895_RS07790 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JR895_RS07790 PF02378 Phosphotransferase system, EIIC JR895_RS07795 PF00294 pfkB family carbohydrate kinase JR895_RS07800 PF04227 Indigoidine synthase A like protein JR895_RS07805 PF07662 Na+ dependent nucleoside transporter C-terminus JR895_RS07805 PF01773 Na+ dependent nucleoside transporter N-terminus JR895_RS07810 PF00027 Cyclic nucleotide-binding domain JR895_RS07815 PF01156 Inosine-uridine preferring nucleoside hydrolase JR895_RS07820 PF07662 Na+ dependent nucleoside transporter C-terminus JR895_RS07820 PF01773 Na+ dependent nucleoside transporter N-terminus JR895_RS07825 PF00294 pfkB family carbohydrate kinase JR895_RS07830 PF01261 Xylose isomerase-like TIM barrel JR895_RS07835 PF03601 Conserved hypothetical protein 698 JR895_RS07840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS07840 PF03466 LysR substrate binding domain JR895_RS07845 PF00324 Amino acid permease JR895_RS07850 PF07715 TonB-dependent Receptor Plug Domain JR895_RS07850 PF00593 TonB dependent receptor JR895_RS07855 PF00756 Putative esterase JR895_RS07860 PF01227 GTP cyclohydrolase I JR895_RS07865 PF04235 Protein of unknown function (DUF418) JR895_RS07870 PF00356 Bacterial regulatory proteins, lacI family JR895_RS07875 PF13407 Periplasmic binding protein domain JR895_RS07880 PF00005 ABC transporter JR895_RS07885 PF02653 Branched-chain amino acid transport system / permease component JR895_RS07890 PF01180 Dihydroorotate dehydrogenase JR895_RS07895 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR895_RS07895 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JR895_RS07900 PF10808 Protein of unknown function (DUF2542) JR895_RS07905 PF02698 DUF218 domain JR895_RS07910 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region JR895_RS07910 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JR895_RS07915 PF04172 LrgB-like family JR895_RS07920 PF03788 LrgA family JR895_RS07925 PF01207 Dihydrouridine synthase (Dus) JR895_RS07945 PF09335 SNARE associated Golgi protein JR895_RS07950 PF04893 Yip1 domain JR895_RS07955 PF00768 D-alanyl-D-alanine carboxypeptidase JR895_RS07960 PF01565 FAD binding domain JR895_RS07960 PF09330 D-lactate dehydrogenase, membrane binding JR895_RS07965 PF00933 Glycosyl hydrolase family 3 N terminal domain JR895_RS07965 PF14310 Fibronectin type III-like domain JR895_RS07965 PF01915 Glycosyl hydrolase family 3 C-terminal domain JR895_RS07970 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JR895_RS07975 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS07980 PF00005 ABC transporter JR895_RS07985 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS07995 PF13411 MerR HTH family regulatory protein JR895_RS08000 PF06580 Histidine kinase JR895_RS08000 PF07694 5TMR of 5TMR-LYT JR895_RS08005 PF00072 Response regulator receiver domain JR895_RS08005 PF04397 LytTr DNA-binding domain JR895_RS08010 PF07308 Protein of unknown function (DUF1456) JR895_RS08015 PF06998 Protein of unknown function (DUF1307) JR895_RS08020 PF04434 SWIM zinc finger JR895_RS08025 PF05762 VWA domain containing CoxE-like protein JR895_RS08035 PF07728 AAA domain (dynein-related subfamily) JR895_RS08045 PF13569 Domain of unknown function (DUF4132) JR895_RS08050 PF13569 Domain of unknown function (DUF4132) JR895_RS08055 PF09334 tRNA synthetases class I (M) JR895_RS08055 PF01588 Putative tRNA binding domain JR895_RS08060 PF10609 NUBPL iron-transfer P-loop NTPase JR895_RS08065 PF10836 Protein of unknown function (DUF2574) JR895_RS08070 PF00419 Fimbrial protein JR895_RS08075 PF02753 Pili assembly chaperone PapD, C-terminal domain JR895_RS08075 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JR895_RS08080 PF13953 PapC C-terminal domain JR895_RS08080 PF13954 PapC N-terminal domain JR895_RS08080 PF00577 Outer membrane usher protein JR895_RS08100 PF11776 Nickel/cobalt transporter regulator JR895_RS08105 PF03824 High-affinity nickel-transport protein JR895_RS08110 PF02583 Metal-sensitive transcriptional repressor JR895_RS08115 PF02110 Hydroxyethylthiazole kinase family JR895_RS08120 PF08543 Phosphomethylpyrimidine kinase JR895_RS08125 PF01183 Glycosyl hydrolases family 25 JR895_RS08130 PF00392 Bacterial regulatory proteins, gntR family JR895_RS08130 PF07702 UTRA domain JR895_RS08135 PF00294 pfkB family carbohydrate kinase JR895_RS08140 PF03747 ADP-ribosylglycohydrolase JR895_RS08145 PF03825 Nucleoside H+ symporter JR895_RS08150 PF01791 DeoC/LacD family aldolase JR895_RS08155 PF01116 Fructose-bisphosphate aldolase class-II JR895_RS08160 PF08013 Tagatose 6 phosphate kinase JR895_RS08165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JR895_RS08170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JR895_RS08175 PF03611 PTS system sugar-specific permease component JR895_RS08180 PF00107 Zinc-binding dehydrogenase JR895_RS08180 PF08240 Alcohol dehydrogenase GroES-like domain JR895_RS08185 PF08220 DeoR-like helix-turn-helix domain JR895_RS08190 PF00781 Diacylglycerol kinase catalytic domain JR895_RS08200 PF16325 Peptidase family U32 C-terminal domain JR895_RS08200 PF01136 Peptidase family U32 JR895_RS08210 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH JR895_RS08215 PF07411 Domain of unknown function (DUF1508) JR895_RS08220 PF00072 Response regulator receiver domain JR895_RS08220 PF00486 Transcriptional regulatory protein, C terminal JR895_RS08225 PF00672 HAMP domain JR895_RS08225 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS08225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS08230 PF07690 Major Facilitator Superfamily JR895_RS08235 PF00873 AcrB/AcrD/AcrF family JR895_RS08240 PF00873 AcrB/AcrD/AcrF family JR895_RS08245 PF13533 Biotin-lipoyl like JR895_RS08265 PF00092 von Willebrand factor type A domain JR895_RS08280 PF00012 Hsp70 protein JR895_RS08285 PF06029 AlkA N-terminal domain JR895_RS08285 PF00730 HhH-GPD superfamily base excision DNA repair protein JR895_RS08290 PF00990 Diguanylate cyclase, GGDEF domain JR895_RS08290 PF08448 PAS fold JR895_RS08290 PF05231 MASE1 JR895_RS08290 PF00563 EAL domain JR895_RS08290 PF08447 PAS fold JR895_RS08290 PF13426 PAS domain JR895_RS08295 PF00485 Phosphoribulokinase / Uridine kinase family JR895_RS08300 PF00692 dUTPase JR895_RS08305 PF05170 AsmA family JR895_RS08310 PF03741 Integral membrane protein TerC family JR895_RS08310 PF00571 CBS domain JR895_RS08310 PF03471 Transporter associated domain JR895_RS08315 PF18412 Outer-membrane lipoprotein Wza C-terminal domain JR895_RS08315 PF10531 SLBB domain JR895_RS08315 PF02563 Polysaccharide biosynthesis/export protein JR895_RS08320 PF01451 Low molecular weight phosphotyrosine protein phosphatase JR895_RS08325 PF02706 Chain length determinant protein JR895_RS08325 PF13807 G-rich domain on putative tyrosine kinase JR895_RS08325 PF13614 AAA domain JR895_RS08330 PF00535 Glycosyl transferase family 2 JR895_RS08335 PF00132 Bacterial transferase hexapeptide (six repeats) JR895_RS08340 PF13439 Glycosyltransferase Family 4 JR895_RS08340 PF00534 Glycosyl transferases group 1 JR895_RS08350 PF00535 Glycosyl transferase family 2 JR895_RS08355 PF00132 Bacterial transferase hexapeptide (six repeats) JR895_RS08360 PF16363 GDP-mannose 4,6 dehydratase JR895_RS08365 PF01370 NAD dependent epimerase/dehydratase family JR895_RS08370 PF00293 NUDIX domain JR895_RS08375 PF00534 Glycosyl transferases group 1 JR895_RS08375 PF13579 Glycosyl transferase 4-like domain JR895_RS08380 PF00483 Nucleotidyl transferase JR895_RS08380 PF01050 Mannose-6-phosphate isomerase JR895_RS08385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JR895_RS08385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JR895_RS08385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JR895_RS08385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JR895_RS08390 PF02397 Bacterial sugar transferase JR895_RS08400 PF04230 Polysaccharide pyruvyl transferase JR895_RS08405 PF13439 Glycosyltransferase Family 4 JR895_RS08405 PF00534 Glycosyl transferases group 1 JR895_RS08415 PF01370 NAD dependent epimerase/dehydratase family JR895_RS08420 PF00483 Nucleotidyl transferase JR895_RS08450 PF00535 Glycosyl transferase family 2 JR895_RS08455 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JR895_RS08455 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JR895_RS08460 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JR895_RS08460 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JR895_RS08460 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JR895_RS08465 PF02706 Chain length determinant protein JR895_RS08470 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JR895_RS08470 PF01502 Phosphoribosyl-AMP cyclohydrolase JR895_RS08475 PF00977 Histidine biosynthesis protein JR895_RS08480 PF00977 Histidine biosynthesis protein JR895_RS08485 PF00117 Glutamine amidotransferase class-I JR895_RS08490 PF00475 Imidazoleglycerol-phosphate dehydratase JR895_RS08490 PF08645 Polynucleotide kinase 3 phosphatase JR895_RS08495 PF00155 Aminotransferase class I and II JR895_RS08500 PF00815 Histidinol dehydrogenase JR895_RS08505 PF08029 HisG, C-terminal domain JR895_RS08505 PF01634 ATP phosphoribosyltransferase JR895_RS08515 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system JR895_RS08520 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system JR895_RS08525 PF01370 NAD dependent epimerase/dehydratase family JR895_RS08530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS08530 PF03466 LysR substrate binding domain JR895_RS08540 PF13520 Amino acid permease JR895_RS08545 PF04143 Sulphur transport JR895_RS08550 PF01206 Sulfurtransferase TusA JR895_RS08555 PF08411 Exonuclease C-terminal JR895_RS08555 PF00929 Exonuclease JR895_RS08560 PF00768 D-alanyl-D-alanine carboxypeptidase JR895_RS08560 PF07943 Penicillin-binding protein 5, C-terminal domain JR895_RS08565 PF06445 GyrI-like small molecule binding domain JR895_RS08570 PF04632 Fusaric acid resistance protein family JR895_RS08575 PF04363 Protein of unknown function (DUF496) JR895_RS08580 PF10662 Ethanolamine utilisation - propanediol utilisation JR895_RS08605 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A JR895_RS08610 PF06174 Protein of unknown function (DUF987) JR895_RS08615 PF04002 RadC-like JAB domain JR895_RS08620 PF03230 Antirestriction protein JR895_RS08625 PF06067 Domain of unknown function (DUF932) JR895_RS08645 PF13990 YjcZ-like protein JR895_RS08650 PF00350 Dynamin family JR895_RS08680 PF05717 IS66 Orf2 like protein JR895_RS08725 PF02126 Phosphotriesterase family JR895_RS08745 PF00294 pfkB family carbohydrate kinase JR895_RS08755 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JR895_RS08760 PF02654 Cobalamin-5-phosphate synthase JR895_RS08765 PF02277 Phosphoribosyltransferase JR895_RS08770 PF17969 L,D-transpeptidase C-terminal domain JR895_RS08770 PF03734 L,D-transpeptidase catalytic domain JR895_RS08780 PF03466 LysR substrate binding domain JR895_RS08780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS08785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS08785 PF03466 LysR substrate binding domain JR895_RS08795 PF01554 MatE JR895_RS08805 PF01709 Transcriptional regulator JR895_RS08810 PF01048 Phosphorylase superfamily JR895_RS08810 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus JR895_RS08815 PF07690 Major Facilitator Superfamily JR895_RS08815 PF00083 Sugar (and other) transporter JR895_RS08835 PF06167 Glucose-regulated metallo-peptidase M90 JR895_RS08845 PF01292 Prokaryotic cytochrome b561 JR895_RS08850 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JR895_RS08855 PF01794 Ferric reductase like transmembrane component JR895_RS08860 PF00174 Oxidoreductase molybdopterin binding domain JR895_RS08865 PF00576 HIUase/Transthyretin family JR895_RS08870 PF00486 Transcriptional regulatory protein, C terminal JR895_RS08870 PF00072 Response regulator receiver domain JR895_RS08875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS08875 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS08890 PF13936 Helix-turn-helix domain JR895_RS08890 PF00665 Integrase core domain JR895_RS08910 PF01966 HD domain JR895_RS08915 PF18284 DNA methylase N-terminal domain JR895_RS08915 PF00145 C-5 cytosine-specific DNA methylase JR895_RS08920 PF03852 DNA mismatch endonuclease Vsr JR895_RS08925 PF00892 EamA-like transporter family JR895_RS08930 PF05661 Protein of unknown function (DUF808) JR895_RS08935 PF09926 Uncharacterized small protein (DUF2158) JR895_RS08940 PF00990 Diguanylate cyclase, GGDEF domain JR895_RS08940 PF17151 Periplasmic sensor domain JR895_RS08950 PF10733 Protein of unknown function (DUF2525) JR895_RS08955 PF10781 Dextransucrase DSRB JR895_RS08960 PF00196 Bacterial regulatory proteins, luxR family JR895_RS08965 PF01311 Bacterial export proteins, family 1 JR895_RS08970 PF00665 Integrase core domain JR895_RS08970 PF13936 Helix-turn-helix domain JR895_RS08980 PF08019 Phosphoethanolamine transferase EptA/EptB JR895_RS08980 PF00884 Sulfatase JR895_RS08985 PF13936 Helix-turn-helix domain JR895_RS08985 PF00665 Integrase core domain JR895_RS08995 PF08019 Phosphoethanolamine transferase EptA/EptB JR895_RS08995 PF00884 Sulfatase JR895_RS09000 PF13936 Helix-turn-helix domain JR895_RS09000 PF00665 Integrase core domain JR895_RS09005 PF01313 Bacterial export proteins, family 3 JR895_RS09010 PF00813 FliP family JR895_RS09015 PF04347 Flagellar biosynthesis protein, FliO JR895_RS09020 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JR895_RS09020 PF16973 Flagellar motor switch protein FliN N-terminal JR895_RS09025 PF02154 Flagellar motor switch protein FliM JR895_RS09025 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JR895_RS09030 PF03748 Flagellar basal body-associated protein FliL JR895_RS09035 PF02120 Flagellar hook-length control protein FliK JR895_RS09040 PF02050 Flagellar FliJ protein JR895_RS09045 PF18269 T3SS EscN ATPase C-terminal domain JR895_RS09045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JR895_RS09050 PF02108 Flagellar assembly protein FliH JR895_RS09055 PF14842 FliG N-terminal domain JR895_RS09055 PF14841 FliG middle domain JR895_RS09055 PF01706 FliG C-terminal domain JR895_RS09060 PF01514 Secretory protein of YscJ/FliF family JR895_RS09060 PF08345 Flagellar M-ring protein C-terminal JR895_RS09065 PF02049 Flagellar hook-basal body complex protein FliE JR895_RS09070 PF02586 SOS response associated peptidase (SRAP) JR895_RS09075 PF01206 Sulfurtransferase TusA JR895_RS09080 PF04143 Sulphur transport JR895_RS09085 PF13987 YedD-like protein JR895_RS09090 PF02806 Alpha amylase, C-terminal all-beta domain JR895_RS09090 PF00128 Alpha amylase, catalytic domain JR895_RS09095 PF05400 Flagellar protein FliT JR895_RS09100 PF02561 Flagellar protein FliS JR895_RS09105 PF02465 Flagellar hook-associated protein 2 N-terminus JR895_RS09105 PF07195 Flagellar hook-associated protein 2 C-terminus JR895_RS09110 PF12445 Flagellin protein JR895_RS09110 PF00669 Bacterial flagellin N-terminal helical region JR895_RS09110 PF00700 Bacterial flagellin C-terminal helical region JR895_RS09115 PF04542 Sigma-70 region 2 JR895_RS09115 PF04539 Sigma-70 region 3 JR895_RS09115 PF04545 Sigma-70, region 4 JR895_RS09120 PF02899 Phage integrase, N-terminal SAM-like domain JR895_RS09125 PF00497 Bacterial extracellular solute-binding proteins, family 3 JR895_RS09130 PF00291 Pyridoxal-phosphate dependent enzyme JR895_RS09135 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS09140 PF00005 ABC transporter JR895_RS09145 PF00196 Bacterial regulatory proteins, luxR family JR895_RS09145 PF03472 Autoinducer binding domain JR895_RS09150 PF10769 Protein of unknown function (DUF2594) JR895_RS09160 PF00072 Response regulator receiver domain JR895_RS09160 PF00196 Bacterial regulatory proteins, luxR family JR895_RS09165 PF01541 GIY-YIG catalytic domain JR895_RS09165 PF02151 UvrB/uvrC motif JR895_RS09165 PF08459 UvrC Helix-hairpin-helix N-terminal JR895_RS09170 PF01066 CDP-alcohol phosphatidyltransferase JR895_RS09260 PF02899 Phage integrase, N-terminal SAM-like domain JR895_RS09260 PF00589 Phage integrase family JR895_RS09275 PF02384 N-6 DNA Methylase JR895_RS09275 PF12161 HsdM N-terminal domain JR895_RS09285 PF02810 SEC-C motif JR895_RS09285 PF03695 Uncharacterised protein family (UPF0149) JR895_RS09295 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JR895_RS09295 PF11867 Domain of unknown function (DUF3387) JR895_RS09295 PF18766 SWI2/SNF2 ATPase JR895_RS09325 PF13195 Protein of unknown function (DUF4011) JR895_RS09325 PF13086 AAA domain JR895_RS09325 PF13086 AAA domain JR895_RS09325 PF13087 AAA domain JR895_RS09325 PF13087 AAA domain JR895_RS09325 PF13195 Protein of unknown function (DUF4011) JR895_RS09335 PF03695 Uncharacterised protein family (UPF0149) JR895_RS09335 PF02810 SEC-C motif JR895_RS09340 PF03222 Tryptophan/tyrosine permease family JR895_RS09345 PF10678 Protein of unknown function (DUF2492) JR895_RS09350 PF00210 Ferritin-like domain JR895_RS09355 PF13992 YecR-like lipoprotein JR895_RS09365 PF10964 Protein of unknown function (DUF2766) JR895_RS09370 PF00210 Ferritin-like domain JR895_RS09375 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JR895_RS09380 PF00005 ABC transporter JR895_RS09385 PF02653 Branched-chain amino acid transport system / permease component JR895_RS09390 PF02358 Trehalose-phosphatase JR895_RS09395 PF00982 Glycosyltransferase family 20 JR895_RS09400 PF00582 Universal stress protein family JR895_RS09405 PF05247 Flagellar transcriptional activator (FlhD) JR895_RS09410 PF05280 Flagellar transcriptional activator (FlhC) JR895_RS09415 PF01618 MotA/TolQ/ExbB proton channel family JR895_RS09420 PF00691 OmpA family JR895_RS09420 PF13677 Membrane MotB of proton-channel complex MotA/MotB JR895_RS09425 PF01627 Hpt domain JR895_RS09425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS09425 PF02895 Signal transducing histidine kinase, homodimeric domain JR895_RS09425 PF01584 CheW-like domain JR895_RS09425 PF09078 CheY binding JR895_RS09430 PF01584 CheW-like domain JR895_RS09435 PF02203 Tar ligand binding domain homologue JR895_RS09435 PF00672 HAMP domain JR895_RS09435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JR895_RS09440 PF02203 Tar ligand binding domain homologue JR895_RS09440 PF00672 HAMP domain JR895_RS09440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JR895_RS09445 PF03705 CheR methyltransferase, all-alpha domain JR895_RS09445 PF01739 CheR methyltransferase, SAM binding domain JR895_RS09450 PF01339 CheB methylesterase JR895_RS09450 PF00072 Response regulator receiver domain JR895_RS09455 PF00072 Response regulator receiver domain JR895_RS09460 PF04344 Chemotaxis phosphatase, CheZ JR895_RS09465 PF01312 FlhB HrpN YscU SpaS Family JR895_RS09470 PF00771 FHIPEP family JR895_RS09475 PF06366 Flagellar protein FlhE JR895_RS09480 PF07007 Lysozyme inhibitor LprI JR895_RS09485 PF03485 Arginyl tRNA synthetase N terminal domain JR895_RS09485 PF05746 DALR anticodon binding domain JR895_RS09485 PF00750 tRNA synthetases class I (R) JR895_RS09490 PF06185 YecM protein JR895_RS09495 PF03932 CutC family JR895_RS09500 PF03264 NapC/NirT cytochrome c family, N-terminal region JR895_RS09505 PF01568 Molydopterin dinucleotide binding domain JR895_RS09505 PF18364 Molybdopterin oxidoreductase N-terminal domain JR895_RS09505 PF00384 Molybdopterin oxidoreductase JR895_RS09510 PF08003 Protein of unknown function (DUF1698) JR895_RS09515 PF13649 Methyltransferase domain JR895_RS09520 PF01124 MAPEG family JR895_RS09525 PF01904 Protein of unknown function DUF72 JR895_RS09530 PF00857 Isochorismatase family JR895_RS09535 PF00152 tRNA synthetases class II (D, K and N) JR895_RS09535 PF02938 GAD domain JR895_RS09535 PF01336 OB-fold nucleic acid binding domain JR895_RS09540 PF00293 NUDIX domain JR895_RS09545 PF01709 Transcriptional regulator JR895_RS09550 PF02075 Crossover junction endodeoxyribonuclease RuvC JR895_RS09555 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family JR895_RS09565 PF01330 RuvA N terminal domain JR895_RS09565 PF07499 RuvA, C-terminal domain JR895_RS09570 PF05496 Holliday junction DNA helicase RuvB P-loop domain JR895_RS09570 PF17864 RuvB AAA lid domain JR895_RS09570 PF05491 RuvB C-terminal winged helix domain JR895_RS09575 PF00950 ABC 3 transport family JR895_RS09580 PF00005 ABC transporter JR895_RS09585 PF01297 Zinc-uptake complex component A periplasmic JR895_RS09590 PF01551 Peptidase family M23 JR895_RS09590 PF08525 Opacity-associated protein A N-terminal motif JR895_RS09590 PF01476 LysM domain JR895_RS09595 PF03279 Bacterial lipid A biosynthesis acyltransferase JR895_RS09600 PF00224 Pyruvate kinase, barrel domain JR895_RS09600 PF02887 Pyruvate kinase, alpha/beta domain JR895_RS09605 PF01380 SIS domain JR895_RS09605 PF01418 Helix-turn-helix domain, rpiR family JR895_RS09610 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JR895_RS09610 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JR895_RS09615 PF00920 Dehydratase family JR895_RS09620 PF01081 KDPG and KHG aldolase JR895_RS09625 PF02222 ATP-grasp domain JR895_RS09630 PF07130 YebG protein JR895_RS09635 PF13995 YebF-like protein JR895_RS09640 PF04391 Protein of unknown function (DUF533) JR895_RS09645 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JR895_RS09645 PF00326 Prolyl oligopeptidase family JR895_RS09650 PF00929 Exonuclease JR895_RS09655 PF00795 Carbon-nitrogen hydrolase JR895_RS09660 PF06440 DNA polymerase III, theta subunit JR895_RS09665 PF04234 CopC domain JR895_RS09670 PF05425 Copper resistance protein D JR895_RS09675 PF10709 Protein of unknown function (DUF2511) JR895_RS09680 PF00149 Calcineurin-like phosphoesterase JR895_RS09685 PF07358 Protein of unknown function (DUF1482) JR895_RS09690 PF07351 Protein of unknown function (DUF1480) JR895_RS09695 PF01189 16S rRNA methyltransferase RsmB/F JR895_RS09695 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF JR895_RS09695 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JR895_RS09700 PF02470 MlaD protein JR895_RS09705 PF04403 Paraquat-inducible protein A JR895_RS09710 PF13185 GAF domain JR895_RS09715 PF04352 ProQ/FINO family JR895_RS09715 PF17516 ProQ C-terminal domain JR895_RS09720 PF03572 Peptidase family S41 JR895_RS09720 PF00595 PDZ domain JR895_RS09720 PF11818 C-terminal domain of tail specific protease (DUF3340) JR895_RS09720 PF17804 Tail specific protease N-terminal domain JR895_RS09725 PF01435 Peptidase family M48 JR895_RS09730 PF07690 Major Facilitator Superfamily JR895_RS09735 PF09339 IclR helix-turn-helix domain JR895_RS09735 PF01614 Bacterial transcriptional regulator JR895_RS09740 PF13996 YobH-like protein JR895_RS09745 PF13998 MgrB protein JR895_RS09750 PF13974 YebO-like protein JR895_RS09755 PF10736 Protein of unknown function (DUF2627) JR895_RS09760 PF00313 'Cold-shock' DNA-binding domain JR895_RS09765 PF13847 Methyltransferase domain JR895_RS09770 PF02659 Putative manganese efflux pump JR895_RS09775 PF06173 Protein of unknown function (DUF986) JR895_RS09780 PF03613 PTS system mannose/fructose/sorbose family IID component JR895_RS09785 PF03609 PTS system sorbose-specific iic component JR895_RS09790 PF03830 PTS system sorbose subfamily IIB component JR895_RS09790 PF03610 PTS system fructose IIA component JR895_RS09795 PF03741 Integral membrane protein TerC family JR895_RS09795 PF03471 Transporter associated domain JR895_RS09800 PF00563 EAL domain JR895_RS09800 PF12792 CSS motif domain associated with EAL JR895_RS09805 PF03313 Serine dehydratase alpha chain JR895_RS09805 PF03315 Serine dehydratase beta chain JR895_RS09810 PF00293 NUDIX domain JR895_RS09815 PF00425 chorismate binding enzyme JR895_RS09815 PF04715 Anthranilate synthase component I, N terminal region JR895_RS09820 PF03701 Uncharacterised protein family (UPF0181) JR895_RS09825 PF08986 Domain of unknown function (DUF1889) JR895_RS09830 PF01042 Endoribonuclease L-PSP JR895_RS09835 PF13307 Helicase C-terminal domain JR895_RS09835 PF04851 Type III restriction enzyme, res subunit JR895_RS09840 PF00814 Glycoprotease family JR895_RS09845 PF03843 Outer membrane lipoprotein Slp family JR895_RS09850 PF13193 AMP-binding enzyme C-terminal domain JR895_RS09850 PF00501 AMP-binding enzyme JR895_RS09855 PF00570 HRDC domain JR895_RS09855 PF01612 3'-5' exonuclease JR895_RS09860 PF00970 Oxidoreductase FAD-binding domain JR895_RS09860 PF00111 2Fe-2S iron-sulfur cluster binding domain JR895_RS09860 PF00175 Oxidoreductase NAD-binding domain JR895_RS09865 PF00355 Rieske [2Fe-2S] domain JR895_RS09865 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JR895_RS09875 PF00180 Isocitrate/isopropylmalate dehydrogenase JR895_RS09880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS09880 PF03466 LysR substrate binding domain JR895_RS09885 PF01810 LysE type translocator JR895_RS09890 PF09313 Domain of unknown function (DUF1971) JR895_RS09895 PF08956 Domain of unknown function (DUF1869) JR895_RS09900 PF04226 Transglycosylase associated protein JR895_RS09915 PF00990 Diguanylate cyclase, GGDEF domain JR895_RS09915 PF13185 GAF domain JR895_RS09920 PF03891 Domain of unknown function (DUF333) JR895_RS09925 PF04343 Protein of unknown function, DUF488 JR895_RS09930 PF07690 Major Facilitator Superfamily JR895_RS09935 PF12833 Helix-turn-helix domain JR895_RS09935 PF02311 AraC-like ligand binding domain JR895_RS09940 PF04284 Protein of unknown function (DUF441) JR895_RS09950 PF04073 Aminoacyl-tRNA editing domain JR895_RS09955 PF00990 Diguanylate cyclase, GGDEF domain JR895_RS09955 PF17155 Gammaproteobacterial periplasmic sensor domain JR895_RS09960 PF17158 Membrane-associated sensor, integral membrane domain JR895_RS09960 PF00990 Diguanylate cyclase, GGDEF domain JR895_RS09965 PF04285 Protein of unknown function (DUF444) JR895_RS09970 PF06798 PrkA serine protein kinase C-terminal domain JR895_RS09970 PF08298 PrkA AAA domain JR895_RS09975 PF06629 MltA-interacting protein MipA JR895_RS09980 PF00248 Aldo/keto reductase family JR895_RS09985 PF01263 Aldose 1-epimerase JR895_RS09990 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JR895_RS09990 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JR895_RS09995 PF01641 SelR domain JR895_RS10000 PF07023 Protein of unknown function (DUF1315) JR895_RS10005 PF08240 Alcohol dehydrogenase GroES-like domain JR895_RS10005 PF00107 Zinc-binding dehydrogenase JR895_RS10010 PF00083 Sugar (and other) transporter JR895_RS10015 PF00107 Zinc-binding dehydrogenase JR895_RS10015 PF08240 Alcohol dehydrogenase GroES-like domain JR895_RS10020 PF01116 Fructose-bisphosphate aldolase class-II JR895_RS10025 PF00294 pfkB family carbohydrate kinase JR895_RS10030 PF00248 Aldo/keto reductase family JR895_RS10035 PF00455 DeoR C terminal sensor domain JR895_RS10035 PF08220 DeoR-like helix-turn-helix domain JR895_RS10040 PF00083 Sugar (and other) transporter JR895_RS10045 PF00857 Isochorismatase family JR895_RS10050 PF00710 Asparaginase, N-terminal JR895_RS10050 PF17763 Glutaminase/Asparaginase C-terminal domain JR895_RS10055 PF01343 Peptidase family S49 JR895_RS10060 PF00881 Nitroreductase family JR895_RS10065 PF02769 AIR synthase related protein, C-terminal domain JR895_RS10065 PF00586 AIR synthase related protein, N-terminal domain JR895_RS10070 PF01131 DNA topoisomerase JR895_RS10070 PF01751 Toprim domain JR895_RS10075 PF06889 Protein of unknown function (DUF1266) JR895_RS10080 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JR895_RS10080 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JR895_RS10085 PF07383 Protein of unknown function (DUF1496) JR895_RS10090 PF00293 NUDIX domain JR895_RS10095 PF01066 CDP-alcohol phosphatidyltransferase JR895_RS10100 PF00581 Rhodanese-like domain JR895_RS10105 PF00005 ABC transporter JR895_RS10110 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS10115 PF13416 Bacterial extracellular solute-binding protein JR895_RS10120 PF02627 Carboxymuconolactone decarboxylase family JR895_RS10125 PF09335 SNARE associated Golgi protein JR895_RS10135 PF09335 SNARE associated Golgi protein JR895_RS10140 PF03372 Endonuclease/Exonuclease/phosphatase family JR895_RS10145 PF00202 Aminotransferase class-III JR895_RS10150 PF04958 Arginine N-succinyltransferase beta subunit JR895_RS10155 PF00171 Aldehyde dehydrogenase family JR895_RS10160 PF04996 Succinylarginine dihydrolase JR895_RS10165 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JR895_RS10170 PF07813 LTXXQ motif family protein JR895_RS10175 PF05962 HutD JR895_RS10185 PF02540 NAD synthase JR895_RS10190 PF04355 SmpA / OmlA family JR895_RS10195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JR895_RS10210 PF12833 Helix-turn-helix domain JR895_RS10215 PF00440 Bacterial regulatory proteins, tetR family JR895_RS10220 PF07690 Major Facilitator Superfamily JR895_RS10225 PF00440 Bacterial regulatory proteins, tetR family JR895_RS10225 PF02909 Tetracyclin repressor-like, C-terminal domain JR895_RS10245 PF03616 Sodium/glutamate symporter JR895_RS10265 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JR895_RS10270 PF07883 Cupin domain JR895_RS10270 PF12833 Helix-turn-helix domain JR895_RS10275 PF02056 Family 4 glycosyl hydrolase JR895_RS10275 PF11975 Family 4 glycosyl hydrolase C-terminal domain JR895_RS10280 PF04794 YdjC-like protein JR895_RS10285 PF00199 Catalase JR895_RS10285 PF18011 C-terminal domain found in long catalases JR895_RS10285 PF06628 Catalase-related immune-responsive JR895_RS10290 PF10729 Cell division activator CedA JR895_RS10300 PF00375 Sodium:dicarboxylate symporter family JR895_RS10305 PF04307 LexA-binding, inner membrane-associated putative hydrolase JR895_RS10310 PF13419 Haloacid dehalogenase-like hydrolase JR895_RS10315 PF14002 YniB-like protein JR895_RS10320 PF03881 Fructosamine kinase JR895_RS10325 PF11080 Endoribonuclease GhoS JR895_RS10330 PF00294 pfkB family carbohydrate kinase JR895_RS10335 PF04338 Protein of unknown function, DUF481 JR895_RS10350 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JR895_RS10350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JR895_RS10350 PF02824 TGS domain JR895_RS10350 PF03129 Anticodon binding domain JR895_RS10355 PF00707 Translation initiation factor IF-3, C-terminal domain JR895_RS10355 PF05198 Translation initiation factor IF-3, N-terminal domain JR895_RS10360 PF01632 Ribosomal protein L35 JR895_RS10365 PF00453 Ribosomal protein L20 JR895_RS10375 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JR895_RS10375 PF01409 tRNA synthetases class II core domain (F) JR895_RS10380 PF03147 Ferredoxin-fold anticodon binding domain JR895_RS10380 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JR895_RS10380 PF01588 Putative tRNA binding domain JR895_RS10380 PF03483 B3/4 domain JR895_RS10380 PF03484 tRNA synthetase B5 domain JR895_RS10385 PF00216 Bacterial DNA-binding protein JR895_RS10390 PF01032 FecCD transport family JR895_RS10395 PF00255 Glutathione peroxidase JR895_RS10400 PF00005 ABC transporter JR895_RS10405 PF00877 NlpC/P60 family JR895_RS10410 PF00563 EAL domain JR895_RS10415 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JR895_RS10420 PF10636 Hemin uptake protein hemP JR895_RS10425 PF00793 DAHP synthetase I family JR895_RS10430 PF03618 Kinase/pyrophosphorylase JR895_RS10435 PF00391 PEP-utilising enzyme, mobile domain JR895_RS10435 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JR895_RS10435 PF02896 PEP-utilising enzyme, TIM barrel domain JR895_RS10440 PF00501 AMP-binding enzyme JR895_RS10440 PF13193 AMP-binding enzyme C-terminal domain JR895_RS10450 PF01494 FAD binding domain JR895_RS10455 PF01012 Electron transfer flavoprotein domain JR895_RS10455 PF00766 Electron transfer flavoprotein FAD-binding domain JR895_RS10460 PF01012 Electron transfer flavoprotein domain JR895_RS10465 PF02311 AraC-like ligand binding domain JR895_RS10465 PF12833 Helix-turn-helix domain JR895_RS10470 PF12833 Helix-turn-helix domain JR895_RS10470 PF02311 AraC-like ligand binding domain JR895_RS10475 PF02770 Acyl-CoA dehydrogenase, middle domain JR895_RS10475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JR895_RS10475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JR895_RS10480 PF01144 Coenzyme A transferase JR895_RS10485 PF01487 Type I 3-dehydroquinase JR895_RS10490 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JR895_RS10490 PF08501 Shikimate dehydrogenase substrate binding domain JR895_RS10495 PF07690 Major Facilitator Superfamily JR895_RS10500 PF07690 Major Facilitator Superfamily JR895_RS10505 PF08965 Domain of unknown function (DUF1870) JR895_RS10515 PF01594 AI-2E family transporter JR895_RS10520 PF01565 FAD binding domain JR895_RS10520 PF02913 FAD linked oxidases, C-terminal domain JR895_RS10520 PF13183 4Fe-4S dicluster domain JR895_RS10525 PF03061 Thioesterase superfamily JR895_RS10530 PF15930 Domain of unknown function JR895_RS10535 PF01521 Iron-sulphur cluster biosynthesis JR895_RS10540 PF01458 Uncharacterized protein family (UPF0051) JR895_RS10545 PF00005 ABC transporter JR895_RS10550 PF01458 Uncharacterized protein family (UPF0051) JR895_RS10555 PF00266 Aminotransferase class-V JR895_RS10560 PF02657 Fe-S metabolism associated domain JR895_RS10565 PF17969 L,D-transpeptidase C-terminal domain JR895_RS10565 PF01476 LysM domain JR895_RS10565 PF03734 L,D-transpeptidase catalytic domain JR895_RS10570 PF04728 Lipoprotein leucine-zipper JR895_RS10575 PF02887 Pyruvate kinase, alpha/beta domain JR895_RS10575 PF00224 Pyruvate kinase, barrel domain JR895_RS10580 PF10965 Protein of unknown function (DUF2767) JR895_RS10585 PF12800 4Fe-4S binding domain JR895_RS10585 PF13247 4Fe-4S dicluster domain JR895_RS10590 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain JR895_RS10590 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 JR895_RS10600 PF13247 4Fe-4S dicluster domain JR895_RS10605 PF01292 Prokaryotic cytochrome b561 JR895_RS10615 PF13454 FAD-NAD(P)-binding JR895_RS10620 PF08803 Putative mono-oxygenase ydhR JR895_RS10635 PF16168 Adhesin of bacterial autotransporter system, probable stalk JR895_RS10635 PF03212 Pertactin JR895_RS10640 PF01554 MatE JR895_RS10645 PF00677 Lumazine binding domain JR895_RS10655 PF07690 Major Facilitator Superfamily JR895_RS10660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS10660 PF03466 LysR substrate binding domain JR895_RS10665 PF00356 Bacterial regulatory proteins, lacI family JR895_RS10675 PF07690 Major Facilitator Superfamily JR895_RS10680 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JR895_RS10680 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JR895_RS10685 PF00877 NlpC/P60 family JR895_RS10690 PF00462 Glutaredoxin JR895_RS10700 PF00929 Exonuclease JR895_RS10705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JR895_RS10710 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JR895_RS10715 PF16925 Tetracyclin repressor-like, C-terminal domain JR895_RS10715 PF00440 Bacterial regulatory proteins, tetR family JR895_RS10720 PF06945 Protein of unknown function (DUF1289) JR895_RS10725 PF00248 Aldo/keto reductase family JR895_RS10730 PF00080 Copper/zinc superoxide dismutase (SODC) JR895_RS10735 PF04632 Fusaric acid resistance protein family JR895_RS10740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JR895_RS10740 PF00529 HlyD membrane-fusion protein of T1SS JR895_RS10745 PF07869 Protein of unknown function (DUF1656) JR895_RS10750 PF01047 MarR family JR895_RS10755 PF05433 Glycine zipper 2TM domain JR895_RS10760 PF03702 Anhydro-N-acetylmuramic acid kinase JR895_RS10765 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme JR895_RS10770 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JR895_RS10770 PF01243 Pyridoxamine 5'-phosphate oxidase JR895_RS10775 PF00579 tRNA synthetases class I (W and Y) JR895_RS10775 PF01479 S4 domain JR895_RS10780 PF08543 Phosphomethylpyrimidine kinase JR895_RS10785 PF00043 Glutathione S-transferase, C-terminal domain JR895_RS10785 PF02798 Glutathione S-transferase, N-terminal domain JR895_RS10790 PF00854 POT family JR895_RS10795 PF10576 Iron-sulfur binding domain of endonuclease III JR895_RS10795 PF00633 Helix-hairpin-helix motif JR895_RS10795 PF00730 HhH-GPD superfamily base excision DNA repair protein JR895_RS10800 PF02508 Rnf-Nqr subunit, membrane protein JR895_RS10805 PF04205 FMN-binding domain JR895_RS10810 PF03116 NQR2, RnfD, RnfE family JR895_RS10815 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JR895_RS10815 PF10531 SLBB domain JR895_RS10815 PF13375 RnfC Barrel sandwich hybrid domain JR895_RS10815 PF12838 4Fe-4S dicluster domain JR895_RS10820 PF04060 Putative Fe-S cluster JR895_RS10825 PF02508 Rnf-Nqr subunit, membrane protein JR895_RS10830 PF10754 Protein of unknown function (DUF2569) JR895_RS10835 PF05321 Haemolysin expression modulating protein JR895_RS10845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JR895_RS10845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JR895_RS10850 PF00962 Adenosine/AMP deaminase JR895_RS10855 PF00155 Aminotransferase class I and II JR895_RS10860 PF02378 Phosphotransferase system, EIIC JR895_RS10860 PF00367 phosphotransferase system, EIIB JR895_RS10865 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JR895_RS10865 PF00356 Bacterial regulatory proteins, lacI family JR895_RS10875 PF00440 Bacterial regulatory proteins, tetR family JR895_RS10880 PF00703 Glycosyl hydrolases family 2 JR895_RS10880 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JR895_RS10880 PF02837 Glycosyl hydrolases family 2, sugar binding domain JR895_RS10890 PF03573 outer membrane porin, OprD family JR895_RS10895 PF06097 Bacterial protein of unknown function (DUF945) JR895_RS10900 PF01238 Phosphomannose isomerase type I JR895_RS10905 PF05683 Fumarase C-terminus JR895_RS10905 PF05681 Fumarate hydratase (Fumerase) JR895_RS10910 PF00206 Lyase JR895_RS10910 PF10415 Fumarase C C-terminus JR895_RS10915 PF05472 DNA replication terminus site-binding protein (Ter protein) JR895_RS10920 PF00672 HAMP domain JR895_RS10920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS10920 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS10925 PF00072 Response regulator receiver domain JR895_RS10925 PF00486 Transcriptional regulatory protein, C terminal JR895_RS10930 PF06942 GlpM protein JR895_RS10940 PF13520 Amino acid permease JR895_RS10945 PF07338 Protein of unknown function (DUF1471) JR895_RS10950 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JR895_RS10950 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JR895_RS10950 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JR895_RS10955 PF02233 NAD(P) transhydrogenase beta subunit JR895_RS10960 PF01594 AI-2E family transporter JR895_RS10965 PF00893 Small Multidrug Resistance protein JR895_RS10970 PF00893 Small Multidrug Resistance protein JR895_RS10975 PF00089 Trypsin JR895_RS10990 PF07690 Major Facilitator Superfamily JR895_RS10995 PF03466 LysR substrate binding domain JR895_RS10995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS11000 PF00480 ROK family JR895_RS11010 PF00654 Voltage gated chloride channel JR895_RS11015 PF02613 Nitrate reductase delta subunit JR895_RS11020 PF04976 DMSO reductase anchor subunit (DmsC) JR895_RS11025 PF12800 4Fe-4S binding domain JR895_RS11025 PF13247 4Fe-4S dicluster domain JR895_RS11030 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JR895_RS11030 PF00384 Molybdopterin oxidoreductase JR895_RS11030 PF01568 Molydopterin dinucleotide binding domain JR895_RS11035 PF01568 Molydopterin dinucleotide binding domain JR895_RS11035 PF00384 Molybdopterin oxidoreductase JR895_RS11035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JR895_RS11040 PF06649 Protein of unknown function (DUF1161) JR895_RS11045 PF06788 Uncharacterised protein family (UPF0257) JR895_RS11050 PF13302 Acetyltransferase (GNAT) domain JR895_RS11055 PF06932 Protein of unknown function (DUF1283) JR895_RS11060 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JR895_RS11065 PF13378 Enolase C-terminal domain-like JR895_RS11065 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JR895_RS11070 PF08240 Alcohol dehydrogenase GroES-like domain JR895_RS11070 PF00107 Zinc-binding dehydrogenase JR895_RS11080 PF12167 Arm DNA-binding domain JR895_RS11080 PF00589 Phage integrase family JR895_RS11090 PF12684 PDDEXK-like domain of unknown function (DUF3799) JR895_RS11090 PF06630 Enterobacterial exodeoxyribonuclease VIII JR895_RS11095 PF07358 Protein of unknown function (DUF1482) JR895_RS11100 PF05358 DicB protein JR895_RS11110 PF07151 Protein of unknown function (DUF1391) JR895_RS11160 PF01848 Hok/gef family JR895_RS11170 PF06147 Protein of unknown function (DUF968) JR895_RS11175 PF03589 Antitermination protein JR895_RS11185 PF00313 'Cold-shock' DNA-binding domain JR895_RS11190 PF04971 Bacteriophage P21 holin S JR895_RS11195 PF07041 Protein of unknown function (DUF1327) JR895_RS11200 PF00959 Phage lysozyme JR895_RS11205 PF10721 Protein of unknown function (DUF2514) JR895_RS11210 PF00313 'Cold-shock' DNA-binding domain JR895_RS11230 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system JR895_RS11235 PF07166 Protein of unknown function (DUF1398) JR895_RS11265 PF00574 Clp protease JR895_RS11335 PF06316 Enterobacterial Ail/Lom protein JR895_RS11340 PF07484 Phage Tail Collar Domain JR895_RS11340 PF08400 Prophage tail fibre N-terminal JR895_RS11340 PF03335 Phage tail fibre repeat JR895_RS11345 PF02413 Caudovirales tail fibre assembly protein, lambda gpK JR895_RS11350 PF02796 Helix-turn-helix domain of resolvase JR895_RS11350 PF00239 Resolvase, N terminal domain JR895_RS11370 PF01232 Mannitol dehydrogenase Rossmann domain JR895_RS11370 PF08125 Mannitol dehydrogenase C-terminal domain JR895_RS11375 PF14001 YdfZ protein JR895_RS11380 PF07729 FCD domain JR895_RS11380 PF00392 Bacterial regulatory proteins, gntR family JR895_RS11385 PF00106 short chain dehydrogenase JR895_RS11390 PF01432 Peptidase family M3 JR895_RS11395 PF02464 Competence-damaged protein JR895_RS11400 PF04076 Bacterial OB fold (BOF) protein JR895_RS11405 PF00990 Diguanylate cyclase, GGDEF domain JR895_RS11415 PF07690 Major Facilitator Superfamily JR895_RS11420 PF00892 EamA-like transporter family JR895_RS11425 PF00392 Bacterial regulatory proteins, gntR family JR895_RS11425 PF07702 UTRA domain JR895_RS11430 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JR895_RS11435 PF02378 Phosphotransferase system, EIIC JR895_RS11440 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JR895_RS11445 PF11471 Maltoporin periplasmic N-terminal extension JR895_RS11445 PF02264 LamB porin JR895_RS11450 PF00232 Glycosyl hydrolase family 1 JR895_RS11455 PF13999 MarB protein JR895_RS11460 PF12833 Helix-turn-helix domain JR895_RS11465 PF01047 MarR family JR895_RS11470 PF01914 MarC family integral membrane protein JR895_RS11475 PF07690 Major Facilitator Superfamily JR895_RS11485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS11485 PF03466 LysR substrate binding domain JR895_RS11490 PF00171 Aldehyde dehydrogenase family JR895_RS11495 PF04960 Glutaminase JR895_RS11500 PF13811 Domain of unknown function (DUF4186) JR895_RS11505 PF00990 Diguanylate cyclase, GGDEF domain JR895_RS11510 PF01232 Mannitol dehydrogenase Rossmann domain JR895_RS11510 PF08125 Mannitol dehydrogenase C-terminal domain JR895_RS11515 PF01062 Bestrophin, RFP-TM, chloride channel JR895_RS11520 PF13649 Methyltransferase domain JR895_RS11525 PF03992 Antibiotic biosynthesis monooxygenase JR895_RS11530 PF01791 DeoC/LacD family aldolase JR895_RS11535 PF13407 Periplasmic binding protein domain JR895_RS11540 PF02653 Branched-chain amino acid transport system / permease component JR895_RS11545 PF02653 Branched-chain amino acid transport system / permease component JR895_RS11550 PF00005 ABC transporter JR895_RS11555 PF04198 Putative sugar-binding domain JR895_RS11560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JR895_RS11560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JR895_RS11575 PF01381 Helix-turn-helix JR895_RS11580 PF07804 HipA-like C-terminal domain JR895_RS11580 PF13657 HipA N-terminal domain JR895_RS11595 PF00419 Fimbrial protein JR895_RS11600 PF00419 Fimbrial protein JR895_RS11605 PF09160 FimH, mannose binding JR895_RS11610 PF00384 Molybdopterin oxidoreductase JR895_RS11615 PF17073 Two-component-system connector protein JR895_RS11620 PF12833 Helix-turn-helix domain JR895_RS11625 PF00884 Sulfatase JR895_RS11630 PF04055 Radical SAM superfamily JR895_RS11630 PF13186 Iron-sulfur cluster-binding domain JR895_RS11640 PF00005 ABC transporter JR895_RS11640 PF06472 ABC transporter transmembrane region 2 JR895_RS11645 PF07715 TonB-dependent Receptor Plug Domain JR895_RS11650 PF00675 Insulinase (Peptidase family M16) JR895_RS11650 PF05193 Peptidase M16 inactive domain JR895_RS11655 PF00282 Pyridoxal-dependent decarboxylase conserved domain JR895_RS11660 PF13520 Amino acid permease JR895_RS11665 PF02638 Glycosyl hydrolase-like 10 JR895_RS11675 PF00990 Diguanylate cyclase, GGDEF domain JR895_RS11680 PF00990 Diguanylate cyclase, GGDEF domain JR895_RS11680 PF13426 PAS domain JR895_RS11680 PF00563 EAL domain JR895_RS11685 PF01427 D-ala-D-ala dipeptidase JR895_RS11690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JR895_RS11695 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS11700 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS11700 PF12911 N-terminal TM domain of oligopeptide transport permease C JR895_RS11705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JR895_RS11705 PF00005 ABC transporter JR895_RS11710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JR895_RS11710 PF00005 ABC transporter JR895_RS11715 PF02566 OsmC-like protein JR895_RS11720 PF10684 Putative biofilm-dependent modulation protein JR895_RS11725 PF08136 30S ribosomal protein subunit S22 family JR895_RS11730 PF00390 Malic enzyme, N-terminal domain JR895_RS11730 PF03949 Malic enzyme, NAD binding domain JR895_RS11735 PF00107 Zinc-binding dehydrogenase JR895_RS11735 PF08240 Alcohol dehydrogenase GroES-like domain JR895_RS11740 PF01381 Helix-turn-helix JR895_RS11745 PF01292 Prokaryotic cytochrome b561 JR895_RS11750 PF12800 4Fe-4S binding domain JR895_RS11750 PF13247 4Fe-4S dicluster domain JR895_RS11750 PF09163 Formate dehydrogenase N, transmembrane JR895_RS11760 PF00892 EamA-like transporter family JR895_RS11765 PF00267 Gram-negative porin JR895_RS11775 PF07690 Major Facilitator Superfamily JR895_RS11780 PF01568 Molydopterin dinucleotide binding domain JR895_RS11780 PF14710 Respiratory nitrate reductase alpha N-terminal JR895_RS11780 PF00384 Molybdopterin oxidoreductase JR895_RS11785 PF13247 4Fe-4S dicluster domain JR895_RS11785 PF14711 Respiratory nitrate reductase beta C-terminal JR895_RS11790 PF02613 Nitrate reductase delta subunit JR895_RS11795 PF02665 Nitrate reductase gamma subunit JR895_RS11800 PF02567 Phenazine biosynthesis-like protein JR895_RS11805 PF00797 N-acetyltransferase JR895_RS11810 PF01613 Flavin reductase like domain JR895_RS11815 PF01361 Tautomerase enzyme JR895_RS11820 PF13808 DDE_Tnp_1-associated JR895_RS11820 PF01609 Transposase DDE domain JR895_RS11840 PF03527 RHS protein JR895_RS11845 PF17520 Family of unknown function (DUF5445) JR895_RS11850 PF13417 Glutathione S-transferase, N-terminal domain JR895_RS11855 PF00324 Amino acid permease JR895_RS11865 PF07715 TonB-dependent Receptor Plug Domain JR895_RS11865 PF00593 TonB dependent receptor JR895_RS11870 PF00392 Bacterial regulatory proteins, gntR family JR895_RS11870 PF07729 FCD domain JR895_RS11875 PF00107 Zinc-binding dehydrogenase JR895_RS11875 PF16884 N-terminal domain of oxidoreductase JR895_RS11880 PF00583 Acetyltransferase (GNAT) family JR895_RS11885 PF04657 Putative inner membrane exporter, YdcZ JR895_RS11890 PF10735 Protein of unknown function (DUF2526) JR895_RS11895 PF10753 Toxin GhoT_OrtT JR895_RS11905 PF00132 Bacterial transferase hexapeptide (six repeats) JR895_RS11910 PF00171 Aldehyde dehydrogenase family JR895_RS11915 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS11920 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS11925 PF00005 ABC transporter JR895_RS11925 PF08402 TOBE domain JR895_RS11930 PF13416 Bacterial extracellular solute-binding protein JR895_RS11935 PF00392 Bacterial regulatory proteins, gntR family JR895_RS11935 PF00155 Aminotransferase class I and II JR895_RS11940 PF01381 Helix-turn-helix JR895_RS11940 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system JR895_RS11945 PF07927 HicA toxin of bacterial toxin-antitoxin, JR895_RS11950 PF10829 Protein of unknown function (DUF2554) JR895_RS11955 PF12392 Collagenase JR895_RS11955 PF01136 Peptidase family U32 JR895_RS11960 PF01381 Helix-turn-helix JR895_RS11960 PF07883 Cupin domain JR895_RS11965 PF03594 Benzoate membrane transport protein JR895_RS11970 PF12323 Helix-turn-helix domain JR895_RS11970 PF01385 Probable transposase JR895_RS11970 PF07282 Putative transposase DNA-binding domain JR895_RS11980 PF11769 Protein of unknown function (DUF3313) JR895_RS11985 PF03848 Tellurite resistance protein TehB JR895_RS11990 PF03595 Voltage-dependent anion channel JR895_RS11995 PF18836 Beta solenoid repeat from YDCK JR895_RS12000 PF13302 Acetyltransferase (GNAT) domain JR895_RS12005 PF04325 Protein of unknown function (DUF465) JR895_RS12010 PF04349 Periplasmic glucan biosynthesis protein, MdoG JR895_RS12015 PF07063 Domain of unknown function (DUF1338) JR895_RS12020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS12020 PF03466 LysR substrate binding domain JR895_RS12025 PF02203 Tar ligand binding domain homologue JR895_RS12025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JR895_RS12025 PF00672 HAMP domain JR895_RS12035 PF01848 Hok/gef family JR895_RS12045 PF01292 Prokaryotic cytochrome b561 JR895_RS12055 PF00171 Aldehyde dehydrogenase family JR895_RS12060 PF02698 DUF218 domain JR895_RS12065 PF00271 Helicase conserved C-terminal domain JR895_RS12065 PF11898 Domain of unknown function (DUF3418) JR895_RS12065 PF00270 DEAD/DEAH box helicase JR895_RS12065 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JR895_RS12065 PF04408 Helicase associated domain (HA2) JR895_RS12070 PF02525 Flavodoxin-like fold JR895_RS12075 PF00782 Dual specificity phosphatase, catalytic domain JR895_RS12090 PF10971 Protein of unknown function (DUF2773) JR895_RS12095 PF00248 Aldo/keto reductase family JR895_RS12100 PF00132 Bacterial transferase hexapeptide (six repeats) JR895_RS12105 PF08223 PaaX-like protein C-terminal domain JR895_RS12105 PF07848 PaaX-like protein JR895_RS12110 PF14535 AMP-binding enzyme C-terminal domain JR895_RS12110 PF00501 AMP-binding enzyme JR895_RS12115 PF00108 Thiolase, N-terminal domain JR895_RS12115 PF02803 Thiolase, C-terminal domain JR895_RS12120 PF03061 Thioesterase superfamily JR895_RS12125 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JR895_RS12125 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JR895_RS12125 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JR895_RS12130 PF00378 Enoyl-CoA hydratase/isomerase JR895_RS12135 PF00378 Enoyl-CoA hydratase/isomerase JR895_RS12140 PF00970 Oxidoreductase FAD-binding domain JR895_RS12140 PF00175 Oxidoreductase NAD-binding domain JR895_RS12140 PF00111 2Fe-2S iron-sulfur cluster binding domain JR895_RS12145 PF01883 Iron-sulfur cluster assembly protein JR895_RS12150 PF05138 Phenylacetic acid catabolic protein JR895_RS12155 PF06243 Phenylacetic acid degradation B JR895_RS12160 PF05138 Phenylacetic acid catabolic protein JR895_RS12165 PF01575 MaoC like domain JR895_RS12165 PF00171 Aldehyde dehydrogenase family JR895_RS12170 PF07833 Copper amine oxidase N-terminal domain JR895_RS12170 PF02727 Copper amine oxidase, N2 domain JR895_RS12170 PF02728 Copper amine oxidase, N3 domain JR895_RS12170 PF01179 Copper amine oxidase, enzyme domain JR895_RS12175 PF00171 Aldehyde dehydrogenase family JR895_RS12180 PF14525 AraC-binding-like domain JR895_RS12180 PF12833 Helix-turn-helix domain JR895_RS12185 PF07027 Protein of unknown function (DUF1318) JR895_RS12190 PF13617 YnbE-like lipoprotein JR895_RS12195 PF11739 Dicarboxylate transport JR895_RS12200 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JR895_RS12200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JR895_RS12205 PF03724 META domain JR895_RS12210 PF03891 Domain of unknown function (DUF333) JR895_RS12215 PF10371 Domain of unknown function JR895_RS12215 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JR895_RS12215 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JR895_RS12215 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JR895_RS12215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JR895_RS12220 PF00267 Gram-negative porin JR895_RS12225 PF00582 Universal stress protein family JR895_RS12230 PF01171 PP-loop family JR895_RS12235 PF00270 DEAD/DEAH box helicase JR895_RS12235 PF03880 DbpA RNA binding domain JR895_RS12235 PF00271 Helicase conserved C-terminal domain JR895_RS12240 PF01544 CorA-like Mg2+ transporter protein JR895_RS12245 PF08448 PAS fold JR895_RS12245 PF00990 Diguanylate cyclase, GGDEF domain JR895_RS12250 PF01713 Smr domain JR895_RS12255 PF03466 LysR substrate binding domain JR895_RS12255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS12260 PF07687 Peptidase dimerisation domain JR895_RS12260 PF01546 Peptidase family M20/M25/M40 JR895_RS12270 PF03806 AbgT putative transporter family JR895_RS12275 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JR895_RS12275 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JR895_RS12280 PF00027 Cyclic nucleotide-binding domain JR895_RS12280 PF00325 Bacterial regulatory proteins, crp family JR895_RS12285 PF00582 Universal stress protein family JR895_RS12290 PF10749 Protein of unknown function (DUF2534) JR895_RS12295 PF00924 Mechanosensitive ion channel JR895_RS12300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JR895_RS12305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS12305 PF03466 LysR substrate binding domain JR895_RS12310 PF12146 Serine aminopeptidase, S33 JR895_RS12320 PF00246 Zinc carboxypeptidase JR895_RS12325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JR895_RS12325 PF13378 Enolase C-terminal domain-like JR895_RS12330 PF08534 Redoxin JR895_RS12335 PF00158 Sigma-54 interaction domain JR895_RS12335 PF13188 PAS domain JR895_RS12335 PF18024 Helix-turn-helix domain JR895_RS12340 PF05128 Domain of unknown function (DUF697) JR895_RS12345 PF04317 YcjX-like family, DUF463 JR895_RS12350 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JR895_RS12350 PF00356 Bacterial regulatory proteins, lacI family JR895_RS12360 PF00005 ABC transporter JR895_RS12360 PF17912 MalK OB fold domain JR895_RS12360 PF03459 TOBE domain JR895_RS12370 PF03636 Glycosyl hydrolase family 65, N-terminal domain JR895_RS12370 PF03633 Glycosyl hydrolase family 65, C-terminal domain JR895_RS12370 PF03632 Glycosyl hydrolase family 65 central catalytic domain JR895_RS12375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JR895_RS12375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JR895_RS12380 PF01261 Xylose isomerase-like TIM barrel JR895_RS12390 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS12395 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS12400 PF01547 Bacterial extracellular solute-binding protein JR895_RS12405 PF00128 Alpha amylase, catalytic domain JR895_RS12410 PF00581 Rhodanese-like domain JR895_RS12415 PF09584 Phage shock protein PspD (Phageshock_PspD) JR895_RS12420 PF04024 PspC domain JR895_RS12425 PF06667 Phage shock protein B JR895_RS12430 PF04012 PspA/IM30 family JR895_RS12435 PF00158 Sigma-54 interaction domain JR895_RS12435 PF02954 Bacterial regulatory protein, Fis family JR895_RS12445 PF01266 FAD dependent oxidoreductase JR895_RS12450 PF00171 Aldehyde dehydrogenase family JR895_RS12455 PF01381 Helix-turn-helix JR895_RS12455 PF07883 Cupin domain JR895_RS12460 PF07722 Peptidase C26 JR895_RS12475 PF00324 Amino acid permease JR895_RS12480 PF10820 Protein of unknown function (DUF2543) JR895_RS12485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JR895_RS12490 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS12495 PF12911 N-terminal TM domain of oligopeptide transport permease C JR895_RS12495 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS12500 PF00005 ABC transporter JR895_RS12500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JR895_RS12505 PF00005 ABC transporter JR895_RS12510 PF04480 Protein of unknown function (DUF559) JR895_RS12525 PF17876 Cold shock domain JR895_RS12525 PF08206 Ribonuclease B OB domain JR895_RS12525 PF00773 RNB domain JR895_RS12525 PF00575 S1 RNA binding domain JR895_RS12535 PF13426 PAS domain JR895_RS12535 PF00563 EAL domain JR895_RS12535 PF00990 Diguanylate cyclase, GGDEF domain JR895_RS12545 PF08220 DeoR-like helix-turn-helix domain JR895_RS12545 PF00455 DeoR C terminal sensor domain JR895_RS12550 PF05433 Glycine zipper 2TM domain JR895_RS12555 PF01253 Translation initiation factor SUI1 JR895_RS12560 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JR895_RS12565 PF18073 Rubredoxin metal binding domain JR895_RS12570 PF06305 Lipopolysaccharide assembly protein A domain JR895_RS12575 PF01569 PAP2 superfamily JR895_RS12580 PF00925 GTP cyclohydrolase II JR895_RS12585 PF00694 Aconitase C-terminal domain JR895_RS12585 PF00330 Aconitase family (aconitate hydratase) JR895_RS12605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS12605 PF03466 LysR substrate binding domain JR895_RS12610 PF08272 Topoisomerase I zinc-ribbon-like JR895_RS12610 PF01396 Topoisomerase DNA binding C4 zinc finger JR895_RS12610 PF01131 DNA topoisomerase JR895_RS12610 PF01751 Toprim domain JR895_RS12615 PF10692 Protein of unknown function (DUF2498) JR895_RS12620 PF08496 Peptidase family S49 N-terminal JR895_RS12620 PF01343 Peptidase family S49 JR895_RS12625 PF00106 short chain dehydrogenase JR895_RS12630 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JR895_RS12630 PF12557 Cob(I)alamin adenosyltransferase N terminal JR895_RS12635 PF00849 RNA pseudouridylate synthase JR895_RS12635 PF01479 S4 domain JR895_RS12640 PF09972 Predicted membrane protein (DUF2207) JR895_RS12645 PF01300 Telomere recombination JR895_RS12650 PF02811 PHP domain JR895_RS12655 PF08255 Trp-operon Leader Peptide JR895_RS12660 PF00425 chorismate binding enzyme JR895_RS12660 PF04715 Anthranilate synthase component I, N terminal region JR895_RS12665 PF00117 Glutamine amidotransferase class-I JR895_RS12665 PF02885 Glycosyl transferase family, helical bundle domain JR895_RS12665 PF00591 Glycosyl transferase family, a/b domain JR895_RS12670 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JR895_RS12670 PF00218 Indole-3-glycerol phosphate synthase JR895_RS12675 PF00291 Pyridoxal-phosphate dependent enzyme JR895_RS12680 PF00290 Tryptophan synthase alpha chain JR895_RS12685 PF10685 Stress-induced bacterial acidophilic repeat motif JR895_RS12690 PF05974 Domain of unknown function (DUF892) JR895_RS12695 PF05974 Domain of unknown function (DUF892) JR895_RS12700 PF03922 OmpW family JR895_RS12715 PF04279 Intracellular septation protein A JR895_RS12720 PF03061 Thioesterase superfamily JR895_RS12725 PF03544 Gram-negative bacterial TonB protein C-terminal JR895_RS12730 PF03795 YCII-related domain JR895_RS12735 PF07885 Ion channel JR895_RS12735 PF02254 TrkA-N domain JR895_RS12745 PF13396 Phospholipase_D-nuclease N-terminal JR895_RS12745 PF13091 PLD-like domain JR895_RS12750 PF04269 Protein of unknown function, DUF440 JR895_RS12755 PF00005 ABC transporter JR895_RS12755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JR895_RS12760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JR895_RS12760 PF00005 ABC transporter JR895_RS12765 PF12911 N-terminal TM domain of oligopeptide transport permease C JR895_RS12765 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS12770 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS12775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JR895_RS12785 PF01914 MarC family integral membrane protein JR895_RS12790 PF00171 Aldehyde dehydrogenase family JR895_RS12790 PF00465 Iron-containing alcohol dehydrogenase JR895_RS12800 PF00265 Thymidine kinase JR895_RS12805 PF00816 H-NS histone family JR895_RS12810 PF00483 Nucleotidyl transferase JR895_RS12815 PF00072 Response regulator receiver domain JR895_RS12820 PF01734 Patatin-like phospholipase JR895_RS12825 PF02810 SEC-C motif JR895_RS12830 PF00551 Formyl transferase JR895_RS12830 PF01842 ACT domain JR895_RS12895 PF02665 Nitrate reductase gamma subunit JR895_RS12900 PF02613 Nitrate reductase delta subunit JR895_RS12905 PF13247 4Fe-4S dicluster domain JR895_RS12905 PF14711 Respiratory nitrate reductase beta C-terminal JR895_RS12910 PF01568 Molydopterin dinucleotide binding domain JR895_RS12910 PF00384 Molybdopterin oxidoreductase JR895_RS12910 PF14710 Respiratory nitrate reductase alpha N-terminal JR895_RS12915 PF07690 Major Facilitator Superfamily JR895_RS12920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS12920 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JR895_RS12920 PF07730 Histidine kinase JR895_RS12920 PF00672 HAMP domain JR895_RS12925 PF00196 Bacterial regulatory proteins, luxR family JR895_RS12925 PF00072 Response regulator receiver domain JR895_RS12930 PF11924 Inverse autotransporter, beta-domain JR895_RS12935 PF02635 DsrE/DsrF-like family JR895_RS12940 PF04752 ChaC-like protein JR895_RS12945 PF06150 ChaB JR895_RS12950 PF01699 Sodium/calcium exchanger protein JR895_RS12960 PF13940 Toxin Ldr, type I toxin-antitoxin system JR895_RS12965 PF13940 Toxin Ldr, type I toxin-antitoxin system JR895_RS12970 PF00793 DAHP synthetase I family JR895_RS12975 PF13369 Transglutaminase-like superfamily JR895_RS12980 PF04247 Invasion gene expression up-regulator, SirB JR895_RS12985 PF13847 Methyltransferase domain JR895_RS12985 PF17827 PrmC N-terminal domain JR895_RS12990 PF00472 RF-1 domain JR895_RS12990 PF03462 PCRF domain JR895_RS12995 PF01488 Shikimate / quinate 5-dehydrogenase JR895_RS12995 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JR895_RS12995 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JR895_RS13000 PF03550 Outer membrane lipoprotein LolB JR895_RS13005 PF08544 GHMP kinases C terminal JR895_RS13005 PF00288 GHMP kinases N terminal domain JR895_RS13010 PF14572 Phosphoribosyl synthetase-associated domain JR895_RS13010 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JR895_RS13015 PF00916 Sulfate permease family JR895_RS13015 PF01740 STAS domain JR895_RS13020 PF10762 Protein of unknown function (DUF2583) JR895_RS13025 PF01195 Peptidyl-tRNA hydrolase JR895_RS13030 PF06071 Protein of unknown function (DUF933) JR895_RS13030 PF01926 50S ribosome-binding GTPase JR895_RS13035 PF03797 Autotransporter beta-domain JR895_RS13035 PF03212 Pertactin JR895_RS13040 PF02954 Bacterial regulatory protein, Fis family JR895_RS13040 PF00989 PAS fold JR895_RS13040 PF00158 Sigma-54 interaction domain JR895_RS13045 PF02733 Dak1 domain JR895_RS13050 PF02734 DAK2 domain JR895_RS13055 PF00381 PTS HPr component phosphorylation site JR895_RS13055 PF03610 PTS system fructose IIA component JR895_RS13055 PF05524 PEP-utilising enzyme, N-terminal JR895_RS13055 PF00391 PEP-utilising enzyme, mobile domain JR895_RS13060 PF01204 Trehalase JR895_RS13070 PF04226 Transglycosylase associated protein JR895_RS13075 PF07317 Flagellar regulator YcgR JR895_RS13075 PF07238 PilZ domain JR895_RS13080 PF01464 Transglycosylase SLT domain JR895_RS13085 PF02016 LD-carboxypeptidase N-terminal domain JR895_RS13085 PF17676 LD-carboxypeptidase C-terminal domain JR895_RS13090 PF02080 TrkA-C domain JR895_RS13090 PF00999 Sodium/hydrogen exchanger family JR895_RS13090 PF03471 Transporter associated domain JR895_RS13095 PF01168 Alanine racemase, N-terminal domain JR895_RS13095 PF00842 Alanine racemase, C-terminal domain JR895_RS13100 PF01266 FAD dependent oxidoreductase JR895_RS13105 PF04293 SpoVR like protein JR895_RS13110 PF00392 Bacterial regulatory proteins, gntR family JR895_RS13110 PF07840 FadR C-terminal domain JR895_RS13115 PF06450 Bacterial Na+/H+ antiporter B (NhaB) JR895_RS13120 PF02600 Disulfide bond formation protein DsbB JR895_RS13125 PF11799 impB/mucB/samB family C-terminal domain JR895_RS13125 PF00817 impB/mucB/samB family JR895_RS13125 PF11798 IMS family HHH motif JR895_RS13125 PF13438 Domain of unknown function (DUF4113) JR895_RS13130 PF00717 Peptidase S24-like JR895_RS13140 PF03692 Putative zinc- or iron-chelating domain JR895_RS13145 PF01557 Fumarylacetoacetate (FAA) hydrolase family JR895_RS13150 PF05166 YcgL domain JR895_RS13155 PF04151 Bacterial pre-peptidase C-terminal domain JR895_RS13160 PF05666 Fels-1 Prophage Protein-like JR895_RS13165 PF05209 Septum formation inhibitor MinC, N-terminal domain JR895_RS13165 PF03775 Septum formation inhibitor MinC, C-terminal domain JR895_RS13170 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JR895_RS13175 PF03776 Septum formation topological specificity factor MinE JR895_RS13200 PF13436 Glycine-zipper domain JR895_RS13205 PF16456 YmgD protein JR895_RS13220 PF00563 EAL domain JR895_RS13220 PF12792 CSS motif domain associated with EAL JR895_RS13230 PF10798 Biofilm development protein YmgB/AriR JR895_RS13240 PF10798 Biofilm development protein YmgB/AriR JR895_RS13250 PF13411 MerR HTH family regulatory protein JR895_RS13255 PF07166 Protein of unknown function (DUF1398) JR895_RS13275 PF00180 Isocitrate/isopropylmalate dehydrogenase JR895_RS13280 PF00849 RNA pseudouridylate synthase JR895_RS13285 PF00293 NUDIX domain JR895_RS13295 PF04356 Protein of unknown function (DUF489) JR895_RS13300 PF08328 Adenylosuccinate lyase C-terminal JR895_RS13300 PF00206 Lyase JR895_RS13305 PF00072 Response regulator receiver domain JR895_RS13305 PF00486 Transcriptional regulatory protein, C terminal JR895_RS13310 PF08918 PhoQ Sensor JR895_RS13310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS13315 PF08007 Cupin superfamily protein JR895_RS13320 PF07687 Peptidase dimerisation domain JR895_RS13320 PF01546 Peptidase family M20/M25/M40 JR895_RS13325 PF08402 TOBE domain JR895_RS13325 PF00005 ABC transporter JR895_RS13330 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS13335 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS13340 PF13416 Bacterial extracellular solute-binding protein JR895_RS13345 PF12158 Protein of unknown function (DUF3592) JR895_RS13350 PF04536 TPM domain JR895_RS13355 PF02146 Sir2 family JR895_RS13360 PF00480 ROK family JR895_RS13365 PF12704 MacB-like periplasmic core domain JR895_RS13365 PF02687 FtsX-like permease family JR895_RS13370 PF00005 ABC transporter JR895_RS13375 PF12704 MacB-like periplasmic core domain JR895_RS13375 PF02687 FtsX-like permease family JR895_RS13380 PF01757 Acyltransferase family JR895_RS13385 PF00271 Helicase conserved C-terminal domain JR895_RS13385 PF17757 UvrB interaction domain JR895_RS13385 PF00270 DEAD/DEAH box helicase JR895_RS13385 PF02559 CarD-like/TRCF domain JR895_RS13385 PF03461 TRCF domain JR895_RS13390 PF01476 LysM domain JR895_RS13390 PF17969 L,D-transpeptidase C-terminal domain JR895_RS13390 PF03734 L,D-transpeptidase catalytic domain JR895_RS13395 PF07338 Protein of unknown function (DUF1471) JR895_RS13400 PF00440 Bacterial regulatory proteins, tetR family JR895_RS13405 PF05433 Glycine zipper 2TM domain JR895_RS13410 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR895_RS13415 PF05728 Uncharacterised protein family (UPF0227) JR895_RS13420 PF00933 Glycosyl hydrolase family 3 N terminal domain JR895_RS13425 PF01636 Phosphotransferase enzyme family JR895_RS13430 PF13036 Peptidoglycan-synthase activator LpoB JR895_RS13435 PF07233 Protein of unknown function (DUF1425) JR895_RS13440 PF01230 HIT domain JR895_RS13445 PF00593 TonB dependent receptor JR895_RS13445 PF07715 TonB-dependent Receptor Plug Domain JR895_RS13450 PF02378 Phosphotransferase system, EIIC JR895_RS13450 PF00367 phosphotransferase system, EIIB JR895_RS13455 PF01026 TatD related DNase JR895_RS13460 PF09115 DNA polymerase III, delta subunit, C terminal JR895_RS13465 PF02223 Thymidylate kinase JR895_RS13470 PF02618 YceG-like family JR895_RS13475 PF01063 Amino-transferase class IV JR895_RS13480 PF02801 Beta-ketoacyl synthase, C-terminal domain JR895_RS13480 PF00109 Beta-ketoacyl synthase, N-terminal domain JR895_RS13485 PF00550 Phosphopantetheine attachment site JR895_RS13495 PF00698 Acyl transferase domain JR895_RS13500 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JR895_RS13500 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JR895_RS13505 PF02504 Fatty acid synthesis protein JR895_RS13510 PF01783 Ribosomal L32p protein family JR895_RS13515 PF02620 Large ribosomal RNA subunit accumulation protein YceD JR895_RS13520 PF02545 Maf-like protein JR895_RS13525 PF01479 S4 domain JR895_RS13525 PF00849 RNA pseudouridylate synthase JR895_RS13530 PF00575 S1 RNA binding domain JR895_RS13530 PF10150 Ribonuclease E/G family JR895_RS13530 PF12111 Polyribonucleotide phosphorylase C terminal JR895_RS13535 PF00669 Bacterial flagellin N-terminal helical region JR895_RS13540 PF00460 Flagella basal body rod protein JR895_RS13540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JR895_RS13545 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JR895_RS13545 PF10135 Rod binding protein JR895_RS13550 PF02119 Flagellar P-ring protein JR895_RS13555 PF02107 Flagellar L-ring protein JR895_RS13560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JR895_RS13560 PF00460 Flagella basal body rod protein JR895_RS13565 PF00460 Flagella basal body rod protein JR895_RS13565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JR895_RS13570 PF07559 Flagellar basal body protein FlaE JR895_RS13570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JR895_RS13570 PF00460 Flagella basal body rod protein JR895_RS13575 PF13861 FlgD Tudor-like domain JR895_RS13575 PF13860 FlgD Ig-like domain JR895_RS13575 PF03963 Flagellar hook capping protein - N-terminal region JR895_RS13580 PF00460 Flagella basal body rod protein JR895_RS13580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JR895_RS13585 PF00460 Flagella basal body rod protein JR895_RS13590 PF13144 Chaperone for flagella basal body P-ring formation JR895_RS13595 PF04316 Anti-sigma-28 factor, FlgM JR895_RS13600 PF05130 FlgN protein JR895_RS13605 PF03023 Lipid II flippase MurJ JR895_RS13610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JR895_RS13615 PF04337 Protein of unknown function, DUF480 JR895_RS13620 PF13302 Acetyltransferase (GNAT) domain JR895_RS13625 PF07690 Major Facilitator Superfamily JR895_RS13630 PF04399 Glutaredoxin 2, C terminal domain JR895_RS13630 PF13417 Glutathione S-transferase, N-terminal domain JR895_RS13635 PF07273 Protein of unknown function (DUF1439) JR895_RS13640 PF01979 Amidohydrolase family JR895_RS13645 PF06183 DinI-like family JR895_RS13650 PF13991 BssS protein family JR895_RS13655 PF01266 FAD dependent oxidoreductase JR895_RS13660 PF10968 Protein of unknown function (DUF2770) JR895_RS13665 PF01292 Prokaryotic cytochrome b561 JR895_RS13670 PF04264 YceI-like domain JR895_RS13675 PF17773 UPF0176 acylphosphatase like domain JR895_RS13675 PF12368 Rhodanase C-terminal JR895_RS13675 PF00581 Rhodanese-like domain JR895_RS13680 PF03279 Bacterial lipid A biosynthesis acyltransferase JR895_RS13685 PF07690 Major Facilitator Superfamily JR895_RS13690 PF13984 MsyB protein JR895_RS13695 PF07119 Protein of unknown function (DUF1375) JR895_RS13700 PF00535 Glycosyl transferase family 2 JR895_RS13705 PF04349 Periplasmic glucan biosynthesis protein, MdoG JR895_RS13710 PF01757 Acyltransferase family JR895_RS13715 PF13091 PLD-like domain JR895_RS13720 PF01661 Macro domain JR895_RS13730 PF10610 Thin aggregative fimbriae synthesis protein JR895_RS13735 PF07012 Curlin associated repeat JR895_RS13740 PF07012 Curlin associated repeat JR895_RS13745 PF00196 Bacterial regulatory proteins, luxR family JR895_RS13750 PF10627 Curli assembly protein CsgE JR895_RS13755 PF10614 Type VIII secretion system (T8SS), CsgF protein JR895_RS13760 PF03783 Curli production assembly/transport component CsgG JR895_RS13765 PF06496 Protein of unknown function (DUF1097) JR895_RS13770 PF02613 Nitrate reductase delta subunit JR895_RS13775 PF02811 PHP domain JR895_RS13780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JR895_RS13795 PF02562 PhoH-like protein JR895_RS13800 PF04261 Dyp-type peroxidase family JR895_RS13805 PF09375 Imelysin JR895_RS13805 PF13473 Cupredoxin-like domain JR895_RS13815 PF00474 Sodium:solute symporter family JR895_RS13825 PF00171 Aldehyde dehydrogenase family JR895_RS13825 PF14850 DNA-binding domain of Proline dehydrogenase JR895_RS13825 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JR895_RS13825 PF01619 Proline dehydrogenase JR895_RS13830 PF00440 Bacterial regulatory proteins, tetR family JR895_RS13830 PF08362 YcdC-like protein, C-terminal region JR895_RS13835 PF00296 Luciferase-like monooxygenase JR895_RS13840 PF00857 Isochorismatase family JR895_RS13845 PF01042 Endoribonuclease L-PSP JR895_RS13850 PF12697 Alpha/beta hydrolase family JR895_RS13855 PF00881 Nitroreductase family JR895_RS13860 PF01613 Flavin reductase like domain JR895_RS13865 PF00860 Permease family JR895_RS13870 PF10685 Stress-induced bacterial acidophilic repeat motif JR895_RS13875 PF03358 NADPH-dependent FMN reductase JR895_RS13880 PF13993 YccJ-like protein JR895_RS13885 PF00328 Histidine phosphatase superfamily (branch 2) JR895_RS13895 PF00226 DnaJ domain JR895_RS13895 PF01556 DnaJ C terminal domain JR895_RS13905 PF02613 Nitrate reductase delta subunit JR895_RS13910 PF01568 Molydopterin dinucleotide binding domain JR895_RS13910 PF18364 Molybdopterin oxidoreductase N-terminal domain JR895_RS13910 PF00384 Molybdopterin oxidoreductase JR895_RS13915 PF03264 NapC/NirT cytochrome c family, N-terminal region JR895_RS13920 PF00072 Response regulator receiver domain JR895_RS13920 PF00486 Transcriptional regulatory protein, C terminal JR895_RS13925 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JR895_RS13930 PF01627 Hpt domain JR895_RS13930 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS13930 PF00672 HAMP domain JR895_RS13930 PF00072 Response regulator receiver domain JR895_RS13930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS13935 PF12801 4Fe-4S binding domain JR895_RS13940 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system JR895_RS13945 PF15939 Putative antitoxin of bacterial toxin-antitoxin system JR895_RS13955 PF00313 'Cold-shock' DNA-binding domain JR895_RS13960 PF00313 'Cold-shock' DNA-binding domain JR895_RS13970 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF JR895_RS13975 PF06251 Capsule biosynthesis GfcC JR895_RS13980 PF06082 Exopolysaccharide biosynthesis protein YbjH JR895_RS13985 PF02563 Polysaccharide biosynthesis/export protein JR895_RS13985 PF10531 SLBB domain JR895_RS13985 PF18412 Outer-membrane lipoprotein Wza C-terminal domain JR895_RS13990 PF01451 Low molecular weight phosphotyrosine protein phosphatase JR895_RS13995 PF13614 AAA domain JR895_RS13995 PF13807 G-rich domain on putative tyrosine kinase JR895_RS13995 PF02706 Chain length determinant protein JR895_RS14000 PF00328 Histidine phosphatase superfamily (branch 2) JR895_RS14005 PF08173 Membrane bound YbgT-like protein JR895_RS14010 PF02322 Cytochrome bd terminal oxidase subunit II JR895_RS14015 PF01654 Cytochrome bd terminal oxidase subunit I JR895_RS14020 PF04809 HupH hydrogenase expression protein, C-terminal conserved region JR895_RS14025 PF07449 Hydrogenase-1 expression protein HyaE JR895_RS14030 PF01750 Hydrogenase maturation protease JR895_RS14035 PF01292 Prokaryotic cytochrome b561 JR895_RS14040 PF00374 Nickel-dependent hydrogenase JR895_RS14045 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal JR895_RS14045 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JR895_RS14055 PF01027 Inhibitor of apoptosis-promoting Bax1 JR895_RS14060 PF04358 DsrC like protein JR895_RS14065 PF00708 Acylphosphatase JR895_RS14070 PF17785 PUA-like domain JR895_RS14070 PF10672 S-adenosylmethionine-dependent methyltransferase JR895_RS14075 PF08755 Hemimethylated DNA-binding protein YccV like JR895_RS14080 PF13380 CoA binding domain JR895_RS14085 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) JR895_RS14090 PF02142 MGS-like domain JR895_RS14095 PF12462 DNA helicase IV / RNA helicase N terminal JR895_RS14095 PF00580 UvrD/REP helicase N-terminal domain JR895_RS14095 PF13361 UvrD-like helicase C-terminal domain JR895_RS14100 PF03733 Inner membrane component domain JR895_RS14105 PF12805 FUSC-like inner membrane protein yccS JR895_RS14110 PF04994 TfoX C-terminal domain JR895_RS14110 PF04993 TfoX N-terminal domain JR895_RS14115 PF03846 Cell division inhibitor SulA JR895_RS14120 PF00691 OmpA family JR895_RS14120 PF01389 OmpA-like transmembrane domain JR895_RS14125 PF17414 MatP C-terminal ribbon-helix-helix domain JR895_RS14125 PF06303 MatP N-terminal domain JR895_RS14130 PF05362 Lon protease (S16) C-terminal proteolytic domain JR895_RS14130 PF13654 AAA domain JR895_RS14135 PF07977 FabA-like domain JR895_RS14140 PF04957 Ribosome modulation factor JR895_RS14145 PF03886 ABC-type transport auxiliary lipoprotein component JR895_RS14150 PF02470 MlaD protein JR895_RS14155 PF04403 Paraquat-inducible protein A JR895_RS14160 PF00005 ABC transporter JR895_RS14160 PF16326 ABC transporter C-terminal domain JR895_RS14160 PF12848 ABC transporter JR895_RS14165 PF02926 THUMP domain JR895_RS14165 PF10672 S-adenosylmethionine-dependent methyltransferase JR895_RS14165 PF01170 Putative RNA methylase family UPF0020 JR895_RS14170 PF00111 2Fe-2S iron-sulfur cluster binding domain JR895_RS14170 PF03473 MOSC domain JR895_RS14170 PF03476 MOSC N-terminal beta barrel domain JR895_RS14175 PF07126 Cell-division protein ZapC JR895_RS14180 PF01180 Dihydroorotate dehydrogenase JR895_RS14185 PF02753 Pili assembly chaperone PapD, C-terminal domain JR895_RS14185 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JR895_RS14190 PF00419 Fimbrial protein JR895_RS14195 PF00419 Fimbrial protein JR895_RS14200 PF00419 Fimbrial protein JR895_RS14205 PF13954 PapC N-terminal domain JR895_RS14205 PF13953 PapC C-terminal domain JR895_RS14205 PF00577 Outer membrane usher protein JR895_RS14210 PF02753 Pili assembly chaperone PapD, C-terminal domain JR895_RS14210 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JR895_RS14215 PF00419 Fimbrial protein JR895_RS14220 PF03358 NADPH-dependent FMN reductase JR895_RS14225 PF09084 NMT1/THI5 like JR895_RS14230 PF00296 Luciferase-like monooxygenase JR895_RS14235 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS14240 PF00005 ABC transporter JR895_RS14245 PF01433 Peptidase family M1 domain JR895_RS14245 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JR895_RS14245 PF11940 Domain of unknown function (DUF3458) Ig-like fold JR895_RS14250 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JR895_RS14250 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JR895_RS14255 PF00152 tRNA synthetases class II (D, K and N) JR895_RS14255 PF01336 OB-fold nucleic acid binding domain JR895_RS14260 PF00267 Gram-negative porin JR895_RS14265 PF00155 Aminotransferase class I and II JR895_RS14270 PF00753 Metallo-beta-lactamase superfamily JR895_RS14275 PF05951 Bacterial protein of unknown function (DUF882) JR895_RS14280 PF03734 L,D-transpeptidase catalytic domain JR895_RS14280 PF01471 Putative peptidoglycan binding domain JR895_RS14285 PF04310 MukB N-terminal JR895_RS14285 PF16330 MukB hinge domain JR895_RS14290 PF04288 MukE-like family JR895_RS14295 PF03882 MukF winged-helix domain JR895_RS14295 PF17192 MukF middle domain JR895_RS14295 PF17193 MukF C-terminal domain JR895_RS14300 PF13847 Methyltransferase domain JR895_RS14305 PF02698 DUF218 domain JR895_RS14310 PF01636 Phosphotransferase enzyme family JR895_RS14315 PF02348 Cytidylyltransferase JR895_RS14320 PF03966 Trm112p-like protein JR895_RS14325 PF06224 Winged helix DNA-binding domain JR895_RS14330 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JR895_RS14335 PF00664 ABC transporter transmembrane region JR895_RS14335 PF00005 ABC transporter JR895_RS14340 PF00753 Metallo-beta-lactamase superfamily JR895_RS14340 PF03772 Competence protein JR895_RS14345 PF00216 Bacterial DNA-binding protein JR895_RS14350 PF00575 S1 RNA binding domain JR895_RS14355 PF02224 Cytidylate kinase JR895_RS14360 PF01435 Peptidase family M48 JR895_RS14365 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JR895_RS14370 PF00266 Aminotransferase class-V JR895_RS14375 PF04239 Protein of unknown function (DUF421) JR895_RS14380 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding JR895_RS14380 PF18381 YcaO cyclodehydratase C-terminal domain JR895_RS14385 PF01226 Formate/nitrite transporter JR895_RS14390 PF01228 Glycine radical JR895_RS14390 PF02901 Pyruvate formate lyase-like JR895_RS14395 PF04055 Radical SAM superfamily JR895_RS14400 PF02525 Flavodoxin-like fold JR895_RS14405 PF03466 LysR substrate binding domain JR895_RS14405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS14410 PF13520 Amino acid permease JR895_RS14415 PF07690 Major Facilitator Superfamily JR895_RS14420 PF00857 Isochorismatase family JR895_RS14425 PF04976 DMSO reductase anchor subunit (DmsC) JR895_RS14430 PF13247 4Fe-4S dicluster domain JR895_RS14430 PF12800 4Fe-4S binding domain JR895_RS14435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JR895_RS14435 PF00384 Molybdopterin oxidoreductase JR895_RS14435 PF01568 Molydopterin dinucleotide binding domain JR895_RS14440 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JR895_RS14440 PF02403 Seryl-tRNA synthetase N-terminal domain JR895_RS14445 PF00004 ATPase family associated with various cellular activities (AAA) JR895_RS14445 PF16193 AAA C-terminal domain JR895_RS14445 PF12002 MgsA AAA+ ATPase C terminal JR895_RS14450 PF03548 Outer membrane lipoprotein carrier protein LolA JR895_RS14455 PF17854 FtsK alpha domain JR895_RS14455 PF01580 FtsK/SpoIIIE family JR895_RS14455 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JR895_RS14455 PF09397 Ftsk gamma domain JR895_RS14460 PF01037 Lrp/AsnC ligand binding domain JR895_RS14465 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR895_RS14470 PF00005 ABC transporter JR895_RS14470 PF00664 ABC transporter transmembrane region JR895_RS14475 PF00664 ABC transporter transmembrane region JR895_RS14475 PF00005 ABC transporter JR895_RS14480 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JR895_RS14485 PF01176 Translation initiation factor 1A / IF-1 JR895_RS14495 PF07724 AAA domain (Cdc48 subfamily) JR895_RS14495 PF02861 Clp amino terminal domain, pathogenicity island component JR895_RS14495 PF10431 C-terminal, D2-small domain, of ClpB protein JR895_RS14495 PF17871 AAA lid domain JR895_RS14495 PF00004 ATPase family associated with various cellular activities (AAA) JR895_RS14500 PF02617 ATP-dependent Clp protease adaptor protein ClpS JR895_RS14505 PF00313 'Cold-shock' DNA-binding domain JR895_RS14510 PF12704 MacB-like periplasmic core domain JR895_RS14510 PF00005 ABC transporter JR895_RS14510 PF02687 FtsX-like permease family JR895_RS14515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JR895_RS14520 PF04393 Protein of unknown function (DUF535) JR895_RS14525 PF11398 Protein of unknown function (DUF2813) JR895_RS14530 PF00230 Major intrinsic protein JR895_RS14535 PF03956 Lysine exporter LysO JR895_RS14540 PF03063 Prismane/CO dehydrogenase family JR895_RS14545 PF00970 Oxidoreductase FAD-binding domain JR895_RS14545 PF00111 2Fe-2S iron-sulfur cluster binding domain JR895_RS14545 PF00175 Oxidoreductase NAD-binding domain JR895_RS14550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JR895_RS14550 PF00205 Thiamine pyrophosphate enzyme, central domain JR895_RS14550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JR895_RS14555 PF01212 Beta-eliminating lyase JR895_RS14560 PF13460 NAD(P)H-binding JR895_RS14560 PF11066 Protein of unknown function (DUF2867) JR895_RS14565 PF01370 NAD dependent epimerase/dehydratase family JR895_RS14570 PF01510 N-acetylmuramoyl-L-alanine amidase JR895_RS14575 PF01906 Putative heavy-metal-binding JR895_RS14580 PF12883 Protein of unknown function (DUF3828) JR895_RS14585 PF00005 ABC transporter JR895_RS14590 PF00497 Bacterial extracellular solute-binding proteins, family 3 JR895_RS14595 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS14600 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS14605 PF00497 Bacterial extracellular solute-binding proteins, family 3 JR895_RS14610 PF05958 tRNA (Uracil-5-)-methyltransferase JR895_RS14615 PF10767 Protein of unknown function (DUF2593) JR895_RS14620 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS14625 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS14630 PF00005 ABC transporter JR895_RS14630 PF08402 TOBE domain JR895_RS14635 PF13416 Bacterial extracellular solute-binding protein JR895_RS14640 PF10722 Putative bacterial sensory transduction regulator JR895_RS14645 PF18030 RimK PreATP-grasp domain JR895_RS14645 PF08443 RimK-like ATP-grasp domain JR895_RS14650 PF00881 Nitroreductase family JR895_RS14655 PF07214 Protein of unknown function (DUF1418) JR895_RS14660 PF00462 Glutaredoxin JR895_RS14665 PF11045 Putative inner membrane protein of Enterobacteriaceae JR895_RS14670 PF02080 TrkA-C domain JR895_RS14670 PF06826 Predicted Permease Membrane Region JR895_RS14675 PF00440 Bacterial regulatory proteins, tetR family JR895_RS14680 PF07690 Major Facilitator Superfamily JR895_RS14695 PF07690 Major Facilitator Superfamily JR895_RS14700 PF01569 PAP2 superfamily JR895_RS14705 PF00455 DeoR C terminal sensor domain JR895_RS14705 PF08220 DeoR-like helix-turn-helix domain JR895_RS14710 PF00768 D-alanyl-D-alanine carboxypeptidase JR895_RS14710 PF07943 Penicillin-binding protein 5, C-terminal domain JR895_RS14715 PF00043 Glutathione S-transferase, C-terminal domain JR895_RS14715 PF13417 Glutathione S-transferase, N-terminal domain JR895_RS14720 PF07995 Glucose / Sorbosone dehydrogenase JR895_RS14725 PF10799 Biofilm formation protein (YliH/bssR) JR895_RS14730 PF18693 TRAM domain JR895_RS14730 PF00919 Uncharacterized protein family UPF0004 JR895_RS14730 PF04055 Radical SAM superfamily JR895_RS14735 PF00990 Diguanylate cyclase, GGDEF domain JR895_RS14735 PF17156 Gammaproteobacterial periplasmic sensor domain JR895_RS14740 PF17153 Periplasmic sensor domain, extracellular JR895_RS14740 PF00563 EAL domain JR895_RS14745 PF12911 N-terminal TM domain of oligopeptide transport permease C JR895_RS14745 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS14750 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS14755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JR895_RS14760 PF00005 ABC transporter JR895_RS14760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JR895_RS14765 PF01112 Asparaginase JR895_RS14770 PF03453 MoeA N-terminal region (domain I and II) JR895_RS14770 PF03454 MoeA C-terminal region (domain IV) JR895_RS14770 PF00994 Probable molybdopterin binding domain JR895_RS14775 PF00899 ThiF family JR895_RS14780 PF00923 Transaldolase/Fructose-6-phosphate aldolase JR895_RS14785 PF04055 Radical SAM superfamily JR895_RS14790 PF02901 Pyruvate formate lyase-like JR895_RS14790 PF01228 Glycine radical JR895_RS14800 PF07350 Protein of unknown function (DUF1479) JR895_RS14805 PF00005 ABC transporter JR895_RS14805 PF12848 ABC transporter JR895_RS14810 PF17969 L,D-transpeptidase C-terminal domain JR895_RS14810 PF03734 L,D-transpeptidase catalytic domain JR895_RS14815 PF03600 Citrate transporter JR895_RS14820 PF02742 Iron dependent repressor, metal binding and dimerisation domain JR895_RS14820 PF01325 Iron dependent repressor, N-terminal DNA binding domain JR895_RS14830 PF00884 Sulfatase JR895_RS14835 PF13505 Outer membrane protein beta-barrel domain JR895_RS14845 PF00892 EamA-like transporter family JR895_RS14850 PF00210 Ferritin-like domain JR895_RS14855 PF00497 Bacterial extracellular solute-binding proteins, family 3 JR895_RS14860 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS14865 PF00005 ABC transporter JR895_RS14870 PF00924 Mechanosensitive ion channel JR895_RS14875 PF05971 RNA methyltransferase JR895_RS14880 PF07338 Protein of unknown function (DUF1471) JR895_RS14890 PF13936 Helix-turn-helix domain JR895_RS14890 PF00665 Integrase core domain JR895_RS14900 PF13640 2OG-Fe(II) oxygenase superfamily JR895_RS14900 PF18331 PKHD-type hydroxylase C-terminal domain JR895_RS14905 PF01258 Prokaryotic dksA/traR C4-type zinc finger JR895_RS14910 PF07338 Protein of unknown function (DUF1471) JR895_RS14915 PF02615 Malate/L-lactate dehydrogenase JR895_RS14920 PF02885 Glycosyl transferase family, helical bundle domain JR895_RS14925 PF13307 Helicase C-terminal domain JR895_RS14925 PF00270 DEAD/DEAH box helicase JR895_RS14925 PF06733 DEAD_2 JR895_RS14930 PF08719 Domain of unknown function (DUF1768) JR895_RS14935 PF00270 DEAD/DEAH box helicase JR895_RS14935 PF00271 Helicase conserved C-terminal domain JR895_RS14940 PF09209 Tetracyclin repressor-like, C-terminal domain JR895_RS14940 PF00440 Bacterial regulatory proteins, tetR family JR895_RS14945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JR895_RS14950 PF00005 ABC transporter JR895_RS14965 PF11076 Putative inner membrane protein YbhQ JR895_RS14970 PF03372 Endonuclease/Exonuclease/phosphatase family JR895_RS14975 PF13091 PLD-like domain JR895_RS14980 PF03706 Lysylphosphatidylglycerol synthase TM region JR895_RS14985 PF01027 Inhibitor of apoptosis-promoting Bax1 JR895_RS14990 PF01027 Inhibitor of apoptosis-promoting Bax1 JR895_RS14995 PF02391 MoaE protein JR895_RS15000 PF02597 ThiS family JR895_RS15005 PF01967 MoaC family JR895_RS15010 PF00994 Probable molybdopterin binding domain JR895_RS15015 PF06463 Molybdenum Cofactor Synthesis C JR895_RS15015 PF04055 Radical SAM superfamily JR895_RS15020 PF01933 Uncharacterised protein family UPF0052 JR895_RS15025 PF00271 Helicase conserved C-terminal domain JR895_RS15025 PF02151 UvrB/uvrC motif JR895_RS15025 PF04851 Type III restriction enzyme, res subunit JR895_RS15025 PF17757 UvrB interaction domain JR895_RS15025 PF12344 Ultra-violet resistance protein B JR895_RS15035 PF08241 Methyltransferase domain JR895_RS15040 PF00155 Aminotransferase class I and II JR895_RS15045 PF04055 Radical SAM superfamily JR895_RS15045 PF06968 Biotin and Thiamin Synthesis associated domain JR895_RS15050 PF00202 Aminotransferase class-III JR895_RS15055 PF01161 Phosphatidylethanolamine-binding protein JR895_RS15060 PF01095 Pectinesterase JR895_RS15065 PF00694 Aconitase C-terminal domain JR895_RS15065 PF00330 Aconitase family (aconitate hydratase) JR895_RS15070 PF00939 Sodium:sulfate symporter transmembrane region JR895_RS15075 PF04303 PrpF protein JR895_RS15080 PF03466 LysR substrate binding domain JR895_RS15080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS15085 PF10282 Lactonase, 7-bladed beta-propeller JR895_RS15095 PF00005 ABC transporter JR895_RS15095 PF03459 TOBE domain JR895_RS15100 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS15110 PF10766 Multidrug efflux pump-associated protein AcrZ JR895_RS15115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS15115 PF03459 TOBE domain JR895_RS15120 PF00005 ABC transporter JR895_RS15125 PF16363 GDP-mannose 4,6 dehydratase JR895_RS15130 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JR895_RS15130 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JR895_RS15135 PF00288 GHMP kinases N terminal domain JR895_RS15135 PF08544 GHMP kinases C terminal JR895_RS15135 PF10509 Galactokinase galactose-binding signature JR895_RS15140 PF01263 Aldose 1-epimerase JR895_RS15145 PF00300 Histidine phosphatase superfamily (branch 1) JR895_RS15150 PF00793 DAHP synthetase I family JR895_RS15155 PF13985 YbgS-like protein JR895_RS15160 PF01545 Cation efflux family JR895_RS15165 PF04973 Nicotinamide mononucleotide transporter JR895_RS15170 PF02445 Quinolinate synthetase A protein JR895_RS15210 PF13174 Tetratricopeptide repeat JR895_RS15210 PF16331 TolA binding protein trimerisation JR895_RS15215 PF00691 OmpA family JR895_RS15220 PF07676 WD40-like Beta Propeller Repeat JR895_RS15220 PF04052 TolB amino-terminal domain JR895_RS15225 PF06519 TolA C-terminal JR895_RS15230 PF02472 Biopolymer transport protein ExbD/TolR JR895_RS15235 PF01618 MotA/TolQ/ExbB proton channel family JR895_RS15240 PF03061 Thioesterase superfamily JR895_RS15245 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) JR895_RS15250 PF08173 Membrane bound YbgT-like protein JR895_RS15255 PF02322 Cytochrome bd terminal oxidase subunit II JR895_RS15260 PF01654 Cytochrome bd terminal oxidase subunit I JR895_RS15265 PF01074 Glycosyl hydrolases family 38 N-terminal domain JR895_RS15265 PF07748 Glycosyl hydrolases family 38 C-terminal domain JR895_RS15265 PF09261 Alpha mannosidase middle domain JR895_RS15270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JR895_RS15270 PF02378 Phosphotransferase system, EIIC JR895_RS15270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JR895_RS15275 PF07702 UTRA domain JR895_RS15275 PF00392 Bacterial regulatory proteins, gntR family JR895_RS15280 PF00549 CoA-ligase JR895_RS15280 PF02629 CoA binding domain JR895_RS15285 PF00549 CoA-ligase JR895_RS15285 PF08442 ATP-grasp domain JR895_RS15290 PF00364 Biotin-requiring enzyme JR895_RS15290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JR895_RS15290 PF02817 e3 binding domain JR895_RS15295 PF02779 Transketolase, pyrimidine binding domain JR895_RS15295 PF16078 2-oxoglutarate dehydrogenase N-terminus JR895_RS15295 PF00676 Dehydrogenase E1 component JR895_RS15295 PF16870 2-oxoglutarate dehydrogenase C-terminal JR895_RS15300 PF13085 2Fe-2S iron-sulfur cluster binding domain JR895_RS15305 PF00890 FAD binding domain JR895_RS15305 PF02910 Fumarate reductase flavoprotein C-term JR895_RS15310 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JR895_RS15315 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JR895_RS15325 PF00285 Citrate synthase, C-terminal domain JR895_RS15330 PF00419 Fimbrial protein JR895_RS15335 PF13953 PapC C-terminal domain JR895_RS15335 PF13954 PapC N-terminal domain JR895_RS15335 PF00577 Outer membrane usher protein JR895_RS15340 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JR895_RS15340 PF02753 Pili assembly chaperone PapD, C-terminal domain JR895_RS15345 PF00419 Fimbrial protein JR895_RS15350 PF05145 Transition state regulatory protein AbrB JR895_RS15355 PF06827 Zinc finger found in FPG and IleRS JR895_RS15355 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JR895_RS15355 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JR895_RS15360 PF03746 LamB/YcsF family JR895_RS15365 PF02626 Carboxyltransferase domain, subdomain A and B JR895_RS15370 PF02682 Carboxyltransferase domain, subdomain C and D JR895_RS15375 PF01784 NIF3 (NGG1p interacting factor 3) JR895_RS15380 PF00854 POT family JR895_RS15385 PF00875 DNA photolyase JR895_RS15385 PF03441 FAD binding domain of DNA photolyase JR895_RS15390 PF08349 Protein of unknown function (DUF1722) JR895_RS15425 PF05593 RHS Repeat JR895_RS15425 PF03527 RHS protein JR895_RS15430 PF10725 Protein of unknown function (DUF2517) JR895_RS15435 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) JR895_RS15440 PF03814 Potassium-transporting ATPase A subunit JR895_RS15450 PF02669 K+-transporting ATPase, c chain JR895_RS15455 PF13492 GAF domain JR895_RS15455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS15455 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS15455 PF02702 Osmosensitive K+ channel His kinase sensor domain JR895_RS15455 PF13493 Domain of unknown function (DUF4118) JR895_RS15460 PF00072 Response regulator receiver domain JR895_RS15460 PF00486 Transcriptional regulatory protein, C terminal JR895_RS15470 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JR895_RS15470 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JR895_RS15470 PF01276 Orn/Lys/Arg decarboxylase, major domain JR895_RS15475 PF13520 Amino acid permease JR895_RS15490 PF10946 Protein of unknown function DUF2625 JR895_RS15500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JR895_RS15500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JR895_RS15500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JR895_RS15500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JR895_RS15505 PF03925 SeqA protein C-terminal domain JR895_RS15505 PF17206 SeqA protein N-terminal domain JR895_RS15510 PF12697 Alpha/beta hydrolase family JR895_RS15515 PF01402 Ribbon-helix-helix protein, copG family JR895_RS15520 PF00258 Flavodoxin JR895_RS15530 PF01475 Ferric uptake regulator family JR895_RS15535 PF13982 YbfN-like lipoprotein JR895_RS15540 PF03573 outer membrane porin, OprD family JR895_RS15545 PF00749 tRNA synthetases class I (E and Q), catalytic domain JR895_RS15545 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JR895_RS15550 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JR895_RS15550 PF00367 phosphotransferase system, EIIB JR895_RS15550 PF02378 Phosphotransferase system, EIIC JR895_RS15555 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JR895_RS15560 PF01979 Amidohydrolase family JR895_RS15565 PF01047 MarR family JR895_RS15565 PF00480 ROK family JR895_RS15570 PF13344 Haloacid dehalogenase-like hydrolase JR895_RS15575 PF13537 Glutamine amidotransferase domain JR895_RS15575 PF00733 Asparagine synthase JR895_RS15615 PF01494 FAD binding domain JR895_RS15620 PF01938 TRAM domain JR895_RS15620 PF00919 Uncharacterized protein family UPF0004 JR895_RS15620 PF04055 Radical SAM superfamily JR895_RS15625 PF02562 PhoH-like protein JR895_RS15630 PF02130 Uncharacterized protein family UPF0054 JR895_RS15635 PF03471 Transporter associated domain JR895_RS15635 PF00571 CBS domain JR895_RS15640 PF00795 Carbon-nitrogen hydrolase JR895_RS15645 PF01694 Rhomboid family JR895_RS15650 PF00497 Bacterial extracellular solute-binding proteins, family 3 JR895_RS15655 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS15660 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS15665 PF00005 ABC transporter JR895_RS15670 PF01156 Inosine-uridine preferring nucleoside hydrolase JR895_RS15675 PF00012 Hsp70 protein JR895_RS15685 PF06889 Protein of unknown function (DUF1266) JR895_RS15690 PF08238 Sel1 repeat JR895_RS15700 PF06889 Protein of unknown function (DUF1266) JR895_RS15705 PF08238 Sel1 repeat JR895_RS15710 PF07295 Zinc-ribbon containing domain JR895_RS15715 PF08264 Anticodon-binding domain of tRNA JR895_RS15715 PF13603 Leucyl-tRNA synthetase, Domain 2 JR895_RS15715 PF00133 tRNA synthetases class I (I, L, M and V) JR895_RS15720 PF04390 Lipopolysaccharide-assembly JR895_RS15725 PF06144 DNA polymerase III, delta subunit JR895_RS15725 PF14840 Processivity clamp loader gamma complex DNA pol III C-term JR895_RS15730 PF01467 Cytidylyltransferase-like JR895_RS15735 PF00300 Histidine phosphatase superfamily (branch 1) JR895_RS15745 PF02590 Predicted SPOUT methyltransferase JR895_RS15750 PF03717 Penicillin-binding Protein dimerisation domain JR895_RS15750 PF00905 Penicillin binding protein transpeptidase domain JR895_RS15755 PF01098 Cell cycle protein JR895_RS15760 PF03330 Lytic transglycolase JR895_RS15760 PF05036 Sporulation related domain JR895_RS15765 PF07943 Penicillin-binding protein 5, C-terminal domain JR895_RS15765 PF00768 D-alanyl-D-alanine carboxypeptidase JR895_RS15770 PF04359 Protein of unknown function (DUF493) JR895_RS15775 PF03099 Biotin/lipoate A/B protein ligase family JR895_RS15780 PF03466 LysR substrate binding domain JR895_RS15780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS15785 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JR895_RS15785 PF04055 Radical SAM superfamily JR895_RS15790 PF02416 mttA/Hcf106 family JR895_RS15795 PF00795 Carbon-nitrogen hydrolase JR895_RS15800 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JR895_RS15805 PF00313 'Cold-shock' DNA-binding domain JR895_RS15810 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP JR895_RS15815 PF03606 C4-dicarboxylate anaerobic carrier JR895_RS15820 PF12431 Transcriptional regulator JR895_RS15820 PF00072 Response regulator receiver domain JR895_RS15825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS15825 PF17203 Single cache domain 3 JR895_RS15825 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JR895_RS15825 PF00989 PAS fold JR895_RS15830 PF08218 Citrate lyase ligase C-terminal domain JR895_RS15835 PF06857 Malonate decarboxylase delta subunit (MdcD) JR895_RS15840 PF03328 HpcH/HpaI aldolase/citrate lyase family JR895_RS15845 PF04223 Citrate lyase, alpha subunit (CitF) JR895_RS15850 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase JR895_RS15855 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JR895_RS15860 PF00939 Sodium:sulfate symporter transmembrane region JR895_RS15865 PF00445 Ribonuclease T2 family JR895_RS15870 PF01272 Transcription elongation factor, GreA/GreB, C-term JR895_RS15870 PF14760 Rnk N-terminus JR895_RS15875 PF00107 Zinc-binding dehydrogenase JR895_RS15875 PF08240 Alcohol dehydrogenase GroES-like domain JR895_RS15875 PF13823 Alcohol dehydrogenase GroES-associated JR895_RS15880 PF00582 Universal stress protein family JR895_RS15885 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR895_RS15885 PF13192 Thioredoxin domain JR895_RS15890 PF00578 AhpC/TSA family JR895_RS15890 PF10417 C-terminal domain of 1-Cys peroxiredoxin JR895_RS15895 PF13098 Thioredoxin-like domain JR895_RS15900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS15900 PF03466 LysR substrate binding domain JR895_RS15905 PF11922 Domain of unknown function (DUF3440) JR895_RS15905 PF01507 Phosphoadenosine phosphosulfate reductase family JR895_RS15910 PF02195 ParB-like nuclease domain JR895_RS15915 PF00155 Aminotransferase class I and II JR895_RS15920 PF00465 Iron-containing alcohol dehydrogenase JR895_RS15925 PF04328 Selenoprotein, putative JR895_RS15930 PF02554 Carbon starvation protein CstA JR895_RS15930 PF13722 5TM C-terminal transporter carbon starvation CstA JR895_RS15935 PF03061 Thioesterase superfamily JR895_RS15945 PF00857 Isochorismatase family JR895_RS15945 PF00550 Phosphopantetheine attachment site JR895_RS15950 PF13193 AMP-binding enzyme C-terminal domain JR895_RS15950 PF00501 AMP-binding enzyme JR895_RS15955 PF00425 chorismate binding enzyme JR895_RS15960 PF01497 Periplasmic binding protein JR895_RS15965 PF05977 Transmembrane secretion effector JR895_RS15970 PF01032 FecCD transport family JR895_RS15975 PF01032 FecCD transport family JR895_RS15980 PF00005 ABC transporter JR895_RS15985 PF02706 Chain length determinant protein JR895_RS15990 PF00975 Thioesterase domain JR895_RS15990 PF13193 AMP-binding enzyme C-terminal domain JR895_RS15990 PF00550 Phosphopantetheine attachment site JR895_RS15990 PF00501 AMP-binding enzyme JR895_RS15990 PF00668 Condensation domain JR895_RS15995 PF03621 MbtH-like protein JR895_RS16000 PF00756 Putative esterase JR895_RS16000 PF11806 Domain of unknown function (DUF3327) JR895_RS16005 PF00593 TonB dependent receptor JR895_RS16005 PF07715 TonB-dependent Receptor Plug Domain JR895_RS16010 PF17837 4'-phosphopantetheinyl transferase N-terminal domain JR895_RS16010 PF01648 4'-phosphopantetheinyl transferase superfamily JR895_RS16015 PF01609 Transposase DDE domain JR895_RS16020 PF01848 Hok/gef family JR895_RS16025 PF04107 Glutamate-cysteine ligase family 2(GCS2) JR895_RS16030 PF06643 Protein of unknown function (DUF1158) JR895_RS16035 PF04237 YjbR JR895_RS16040 PF00881 Nitroreductase family JR895_RS16045 PF00924 Mechanosensitive ion channel JR895_RS16050 PF00324 Amino acid permease JR895_RS16055 PF00873 AcrB/AcrD/AcrF family JR895_RS16060 PF00529 HlyD membrane-fusion protein of T1SS JR895_RS16060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JR895_RS16065 PF11604 Copper binding periplasmic protein CusF JR895_RS16070 PF02321 Outer membrane efflux protein JR895_RS16075 PF00072 Response regulator receiver domain JR895_RS16075 PF00486 Transcriptional regulatory protein, C terminal JR895_RS16080 PF00672 HAMP domain JR895_RS16080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS16080 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS16085 PF04717 Type VI secretion system, phage-baseplate injector JR895_RS16125 PF05593 RHS Repeat JR895_RS16125 PF05488 PAAR motif JR895_RS16145 PF01609 Transposase DDE domain JR895_RS16145 PF13808 DDE_Tnp_1-associated JR895_RS16150 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JR895_RS16150 PF13632 Glycosyl transferase family group 2 JR895_RS16160 PF14488 Domain of unknown function (DUF4434) JR895_RS16170 PF01278 Omptin family JR895_RS16175 PF12833 Helix-turn-helix domain JR895_RS16185 PF08242 Methyltransferase domain JR895_RS16200 PF02386 Cation transport protein JR895_RS16205 PF06085 Lipoprotein Rz1 precursor JR895_RS16210 PF00959 Phage lysozyme JR895_RS16215 PF04971 Bacteriophage P21 holin S JR895_RS16220 PF12833 Helix-turn-helix domain JR895_RS16225 PF08349 Protein of unknown function (DUF1722) JR895_RS16230 PF08212 Lipocalin-like domain JR895_RS16235 PF06530 Phage antitermination protein Q JR895_RS16245 PF05866 Endodeoxyribonuclease RusA JR895_RS16250 PF07102 Protein of unknown function (DUF1364) JR895_RS16300 PF00589 Phage integrase family JR895_RS16310 PF00072 Response regulator receiver domain JR895_RS16310 PF00196 Bacterial regulatory proteins, luxR family JR895_RS16315 PF00419 Fimbrial protein JR895_RS16320 PF00419 Fimbrial protein JR895_RS16325 PF13953 PapC C-terminal domain JR895_RS16325 PF13954 PapC N-terminal domain JR895_RS16325 PF00577 Outer membrane usher protein JR895_RS16330 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JR895_RS16330 PF02753 Pili assembly chaperone PapD, C-terminal domain JR895_RS16335 PF00419 Fimbrial protein JR895_RS16340 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JR895_RS16340 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JR895_RS16350 PF04307 LexA-binding, inner membrane-associated putative hydrolase JR895_RS16355 PF09190 DALR domain JR895_RS16355 PF01406 tRNA synthetases class I (C) catalytic domain JR895_RS16360 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JR895_RS16365 PF12850 Calcineurin-like phosphoesterase superfamily domain JR895_RS16370 PF00731 AIR carboxylase JR895_RS16375 PF02222 ATP-grasp domain JR895_RS16375 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JR895_RS16380 PF00696 Amino acid kinase family JR895_RS16385 PF11392 Protein of unknown function (DUF2877) JR895_RS16390 PF06545 Protein of unknown function (DUF1116) JR895_RS16395 PF00549 CoA-ligase JR895_RS16395 PF02629 CoA binding domain JR895_RS16400 PF02615 Malate/L-lactate dehydrogenase JR895_RS16405 PF01546 Peptidase family M20/M25/M40 JR895_RS16410 PF05899 Protein of unknown function (DUF861) JR895_RS16410 PF07883 Cupin domain JR895_RS16415 PF02595 Glycerate kinase family JR895_RS16420 PF00860 Permease family JR895_RS16425 PF01979 Amidohydrolase family JR895_RS16430 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JR895_RS16435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JR895_RS16435 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JR895_RS16440 PF01261 Xylose isomerase-like TIM barrel JR895_RS16445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JR895_RS16445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JR895_RS16445 PF00205 Thiamine pyrophosphate enzyme, central domain JR895_RS16450 PF09339 IclR helix-turn-helix domain JR895_RS16450 PF01614 Bacterial transcriptional regulator JR895_RS16460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS16460 PF03466 LysR substrate binding domain JR895_RS16485 PF03527 RHS protein JR895_RS16490 PF15631 NTF2 fold immunity protein JR895_RS16495 PF05593 RHS Repeat JR895_RS16495 PF14220 Domain of unknown function (DUF4329) JR895_RS16495 PF03527 RHS protein JR895_RS16505 PF00005 ABC transporter JR895_RS16510 PF13472 GDSL-like Lipase/Acylhydrolase family JR895_RS16515 PF00106 short chain dehydrogenase JR895_RS16520 PF00085 Thioredoxin JR895_RS16525 PF03649 Uncharacterised protein family (UPF0014) JR895_RS16530 PF00005 ABC transporter JR895_RS16535 PF16200 C-terminal region of band_7 JR895_RS16535 PF01145 SPFH domain / Band 7 family JR895_RS16540 PF01957 NfeD-like C-terminal, partner-binding JR895_RS16545 PF13411 MerR HTH family regulatory protein JR895_RS16550 PF13520 Amino acid permease JR895_RS16555 PF04960 Glutaminase JR895_RS16560 PF00403 Heavy-metal-associated domain JR895_RS16565 PF01381 Helix-turn-helix JR895_RS16570 PF01963 TraB family JR895_RS16575 PF04073 Aminoacyl-tRNA editing domain JR895_RS16580 PF00149 Calcineurin-like phosphoesterase JR895_RS16580 PF02872 5'-nucleotidase, C-terminal domain JR895_RS16585 PF07690 Major Facilitator Superfamily JR895_RS16590 PF00999 Sodium/hydrogen exchanger family JR895_RS16590 PF02254 TrkA-N domain JR895_RS16595 PF00294 pfkB family carbohydrate kinase JR895_RS16600 PF07859 alpha/beta hydrolase fold JR895_RS16605 PF00762 Ferrochelatase JR895_RS16610 PF05191 Adenylate kinase, active site lid JR895_RS16615 PF00183 Hsp90 protein JR895_RS16615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS16620 PF13662 Toprim domain JR895_RS16620 PF02132 RecR protein JR895_RS16625 PF02575 YbaB/EbfC DNA-binding family JR895_RS16630 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JR895_RS16630 PF12169 DNA polymerase III subunits gamma and tau domain III JR895_RS16630 PF12170 DNA polymerase III tau subunit V interacting with alpha JR895_RS16635 PF00156 Phosphoribosyl transferase domain JR895_RS16640 PF04304 Protein of unknown function (DUF454) JR895_RS16645 PF07445 Primosomal replication protein priC JR895_RS16650 PF10689 Protein of unknown function (DUF2496) JR895_RS16655 PF12795 Mechanosensitive ion channel porin domain JR895_RS16655 PF12794 Mechanosensitive ion channel inner membrane domain 1 JR895_RS16655 PF00924 Mechanosensitive ion channel JR895_RS16660 PF08361 MAATS-type transcriptional repressor, C-terminal region JR895_RS16660 PF00440 Bacterial regulatory proteins, tetR family JR895_RS16665 PF00529 HlyD membrane-fusion protein of T1SS JR895_RS16665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JR895_RS16670 PF00873 AcrB/AcrD/AcrF family JR895_RS16675 PF10757 Biofilm formation regulator YbaJ JR895_RS16680 PF05321 Haemolysin expression modulating protein JR895_RS16685 PF12464 Maltose acetyltransferase JR895_RS16685 PF14602 Hexapeptide repeat of succinyl-transferase JR895_RS16690 PF10777 Inner membrane protein YlaC JR895_RS16695 PF12792 CSS motif domain associated with EAL JR895_RS16695 PF00563 EAL domain JR895_RS16700 PF07237 Protein of unknown function (DUF1428) JR895_RS16710 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JR895_RS16715 PF09619 Type III secretion system lipoprotein chaperone (YscW) JR895_RS16725 PF00909 Ammonium Transporter Family JR895_RS16730 PF00543 Nitrogen regulatory protein P-II JR895_RS16735 PF00664 ABC transporter transmembrane region JR895_RS16735 PF00005 ABC transporter JR895_RS16740 PF00005 ABC transporter JR895_RS16740 PF00664 ABC transporter transmembrane region JR895_RS16745 PF13404 AsnC-type helix-turn-helix domain JR895_RS16745 PF01037 Lrp/AsnC ligand binding domain JR895_RS16755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JR895_RS16755 PF12793 Sugar transport-related sRNA regulator N-term JR895_RS16760 PF06508 Queuosine biosynthesis protein QueC JR895_RS16775 PF13145 PPIC-type PPIASE domain JR895_RS16780 PF00216 Bacterial DNA-binding protein JR895_RS16785 PF02190 ATP-dependent protease La (LON) substrate-binding domain JR895_RS16785 PF05362 Lon protease (S16) C-terminal proteolytic domain JR895_RS16785 PF00004 ATPase family associated with various cellular activities (AAA) JR895_RS16790 PF10431 C-terminal, D2-small domain, of ClpB protein JR895_RS16790 PF07724 AAA domain (Cdc48 subfamily) JR895_RS16790 PF06689 ClpX C4-type zinc finger JR895_RS16795 PF00574 Clp protease JR895_RS16800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JR895_RS16800 PF05697 Bacterial trigger factor protein (TF) JR895_RS16800 PF05698 Bacterial trigger factor protein (TF) C-terminus JR895_RS16805 PF01722 BolA-like protein JR895_RS16810 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JR895_RS16810 PF03923 Uncharacterized lipoprotein JR895_RS16815 PF07690 Major Facilitator Superfamily JR895_RS16820 PF06481 COX Aromatic Rich Motif JR895_RS16820 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JR895_RS16825 PF00115 Cytochrome C and Quinol oxidase polypeptide I JR895_RS16830 PF00510 Cytochrome c oxidase subunit III JR895_RS16835 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JR895_RS16840 PF01040 UbiA prenyltransferase family JR895_RS16845 PF07690 Major Facilitator Superfamily JR895_RS16850 PF04461 Protein of unknown function (DUF520) JR895_RS16855 PF02558 Ketopantoate reductase PanE/ApbA JR895_RS16855 PF08546 Ketopantoate reductase PanE/ApbA C terminal JR895_RS16860 PF01965 DJ-1/PfpI family JR895_RS16865 PF02568 Thiamine biosynthesis protein (ThiI) JR895_RS16865 PF02926 THUMP domain JR895_RS16870 PF02609 Exonuclease VII small subunit JR895_RS16875 PF00348 Polyprenyl synthetase JR895_RS16880 PF02779 Transketolase, pyrimidine binding domain JR895_RS16880 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JR895_RS16880 PF02780 Transketolase, C-terminal domain JR895_RS16885 PF00248 Aldo/keto reductase family JR895_RS16890 PF04608 Phosphatidylglycerophosphatase A JR895_RS16895 PF00586 AIR synthase related protein, N-terminal domain JR895_RS16895 PF02769 AIR synthase related protein, C-terminal domain JR895_RS16900 PF01029 NusB family JR895_RS16905 PF00885 6,7-dimethyl-8-ribityllumazine synthase JR895_RS16910 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JR895_RS16910 PF01872 RibD C-terminal domain JR895_RS16915 PF03477 ATP cone domain JR895_RS16920 PF11622 Protein of unknown function (DUF3251) JR895_RS16925 PF03502 Nucleoside-specific channel-forming protein, Tsx JR895_RS16930 PF01844 HNH endonuclease JR895_RS16935 PF02355 Protein export membrane protein JR895_RS16935 PF07549 SecD/SecF GG Motif JR895_RS16940 PF02355 Protein export membrane protein JR895_RS16940 PF13721 SecD export protein N-terminal TM region JR895_RS16940 PF07549 SecD/SecF GG Motif JR895_RS16945 PF02699 Preprotein translocase subunit JR895_RS16950 PF01702 Queuine tRNA-ribosyltransferase JR895_RS16955 PF02547 Queuosine biosynthesis protein JR895_RS16960 PF04336 Acyl carrier protein phosphodiesterase JR895_RS16965 PF00128 Alpha amylase, catalytic domain JR895_RS16965 PF02903 Alpha amylase, N-terminal ig-like domain JR895_RS16970 PF00324 Amino acid permease JR895_RS16975 PF05525 Branched-chain amino acid transport protein JR895_RS16980 PF11808 Phosphate regulon sensor protein PhoR JR895_RS16980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS16980 PF00989 PAS fold JR895_RS16980 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS16985 PF00072 Response regulator receiver domain JR895_RS16985 PF00486 Transcriptional regulatory protein, C terminal JR895_RS16990 PF00149 Calcineurin-like phosphoesterase JR895_RS16990 PF12320 Type 5 capsule protein repressor C-terminal domain JR895_RS16995 PF13476 AAA domain JR895_RS17000 PF07690 Major Facilitator Superfamily JR895_RS17005 PF00480 ROK family JR895_RS17010 PF04381 Putative exonuclease, RdgC JR895_RS17025 PF06865 Pyrimidine/purine nucleoside phosphorylase JR895_RS17030 PF07302 AroM protein JR895_RS17035 PF16362 YaiA protein JR895_RS17040 PF01202 Shikimate kinase JR895_RS17045 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JR895_RS17050 PF14748 Pyrroline-5-carboxylate reductase dimerisation JR895_RS17050 PF03807 NADP oxidoreductase coenzyme F420-dependent JR895_RS17055 PF05230 MASE2 domain JR895_RS17055 PF00990 Diguanylate cyclase, GGDEF domain JR895_RS17060 PF07769 psiF repeat JR895_RS17065 PF00245 Alkaline phosphatase JR895_RS17070 PF10796 Sigma-S stabilisation anti-adaptor protein JR895_RS17080 PF01820 D-ala D-ala ligase N-terminus JR895_RS17080 PF07478 D-ala D-ala ligase C-terminus JR895_RS17085 PF10953 Protein of unknown function (DUF2754) JR895_RS17090 PF10954 Protein of unknown function (DUF2755) JR895_RS17095 PF07759 Protein of unknown function (DUF1615) JR895_RS17100 PF05992 SbmA/BacA-like family JR895_RS17105 PF00144 Beta-lactamase JR895_RS17110 PF15977 Winged helix-turn-helix DNA binding JR895_RS17115 PF03212 Pertactin JR895_RS17115 PF03797 Autotransporter beta-domain JR895_RS17120 PF00490 Delta-aminolevulinic acid dehydratase JR895_RS17125 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JR895_RS17130 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS17135 PF00005 ABC transporter JR895_RS17145 PF02585 GlcNAc-PI de-N-acetylase JR895_RS17150 PF00535 Glycosyl transferase family 2 JR895_RS17155 PF00132 Bacterial transferase hexapeptide (six repeats) JR895_RS17165 PF02583 Metal-sensitive transcriptional repressor JR895_RS17170 PF00107 Zinc-binding dehydrogenase JR895_RS17170 PF08240 Alcohol dehydrogenase GroES-like domain JR895_RS17175 PF00756 Putative esterase JR895_RS17180 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) JR895_RS17185 PF07690 Major Facilitator Superfamily JR895_RS17190 PF07836 DmpG-like communication domain JR895_RS17190 PF00682 HMGL-like JR895_RS17195 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation JR895_RS17195 PF01118 Semialdehyde dehydrogenase, NAD binding domain JR895_RS17200 PF01557 Fumarylacetoacetate (FAA) hydrolase family JR895_RS17205 PF12697 Alpha/beta hydrolase family JR895_RS17210 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JR895_RS17215 PF01494 FAD binding domain JR895_RS17220 PF09339 IclR helix-turn-helix domain JR895_RS17220 PF01614 Bacterial transcriptional regulator JR895_RS17225 PF00356 Bacterial regulatory proteins, lacI family JR895_RS17230 PF02929 Beta galactosidase small chain JR895_RS17230 PF16353 Domain of unknown function(DUF4981) JR895_RS17230 PF00703 Glycosyl hydrolases family 2 JR895_RS17230 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JR895_RS17230 PF02837 Glycosyl hydrolases family 2, sugar binding domain JR895_RS17235 PF01306 LacY proton/sugar symporter JR895_RS17245 PF07690 Major Facilitator Superfamily JR895_RS17250 PF02560 Cyanate lyase C-terminal domain JR895_RS17255 PF00484 Carbonic anhydrase JR895_RS17260 PF03466 LysR substrate binding domain JR895_RS17260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS17265 PF07969 Amidohydrolase family JR895_RS17270 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JR895_RS17275 PF16177 Acetyl-coenzyme A synthetase N-terminus JR895_RS17275 PF00501 AMP-binding enzyme JR895_RS17275 PF13193 AMP-binding enzyme C-terminal domain JR895_RS17280 PF03972 MmgE/PrpD family JR895_RS17285 PF00285 Citrate synthase, C-terminal domain JR895_RS17295 PF02954 Bacterial regulatory protein, Fis family JR895_RS17295 PF06506 Propionate catabolism activator JR895_RS17295 PF00158 Sigma-54 interaction domain JR895_RS17300 PF07338 Protein of unknown function (DUF1471) JR895_RS17305 PF01810 LysE type translocator JR895_RS17320 PF00107 Zinc-binding dehydrogenase JR895_RS17320 PF08240 Alcohol dehydrogenase GroES-like domain JR895_RS17325 PF07969 Amidohydrolase family JR895_RS17330 PF00696 Amino acid kinase family JR895_RS17340 PF06545 Protein of unknown function (DUF1116) JR895_RS17345 PF02629 CoA binding domain JR895_RS17345 PF00549 CoA-ligase JR895_RS17350 PF11392 Protein of unknown function (DUF2877) JR895_RS17355 PF12796 Ankyrin repeats (3 copies) JR895_RS17360 PF06496 Protein of unknown function (DUF1097) JR895_RS17365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS17365 PF03466 LysR substrate binding domain JR895_RS17370 PF00563 EAL domain JR895_RS17370 PF00196 Bacterial regulatory proteins, luxR family JR895_RS17380 PF02028 BCCT, betaine/carnitine/choline family transporter JR895_RS17385 PF00440 Bacterial regulatory proteins, tetR family JR895_RS17385 PF13977 BetI-type transcriptional repressor, C-terminal JR895_RS17390 PF00171 Aldehyde dehydrogenase family JR895_RS17395 PF05199 GMC oxidoreductase JR895_RS17395 PF00732 GMC oxidoreductase JR895_RS17405 PF02589 LUD domain JR895_RS17410 PF02589 LUD domain JR895_RS17410 PF11870 Domain of unknown function (DUF3390) JR895_RS17410 PF13183 4Fe-4S dicluster domain JR895_RS17415 PF02754 Cysteine-rich domain JR895_RS17420 PF12852 Cupin JR895_RS17420 PF12833 Helix-turn-helix domain JR895_RS17425 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR895_RS17425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JR895_RS17430 PF07338 Protein of unknown function (DUF1471) JR895_RS17435 PF04224 Protein of unknown function, DUF417 JR895_RS17445 PF12833 Helix-turn-helix domain JR895_RS17450 PF11924 Inverse autotransporter, beta-domain JR895_RS17460 PF01197 Ribosomal protein L31 JR895_RS17465 PF00444 Ribosomal protein L36 JR895_RS17475 PF00196 Bacterial regulatory proteins, luxR family JR895_RS17480 PF16449 Fimbrillin MatB JR895_RS17485 PF18649 EcpB C-terminal domain JR895_RS17490 PF15976 CS1-pili formation C-terminal JR895_RS17490 PF16967 E-set like domain JR895_RS17505 PF03692 Putative zinc- or iron-chelating domain JR895_RS17530 PF02413 Caudovirales tail fibre assembly protein, lambda gpK JR895_RS17535 PF07471 Phage DNA packaging protein Nu1 JR895_RS17540 PF13132 Domain of unknown function (DUF3950) JR895_RS17545 PF07166 Protein of unknown function (DUF1398) JR895_RS17555 PF03245 Bacteriophage Rz lysis protein JR895_RS17560 PF00959 Phage lysozyme JR895_RS17565 PF04971 Bacteriophage P21 holin S JR895_RS17570 PF00267 Gram-negative porin JR895_RS17575 PF06530 Phage antitermination protein Q JR895_RS17585 PF05866 Endodeoxyribonuclease RusA JR895_RS17590 PF07102 Protein of unknown function (DUF1364) JR895_RS17620 PF07508 Recombinase JR895_RS17620 PF00239 Resolvase, N terminal domain JR895_RS17620 PF13408 Recombinase zinc beta ribbon domain JR895_RS17630 PF00893 Small Multidrug Resistance protein JR895_RS17645 PF00589 Phage integrase family JR895_RS17650 PF00665 Integrase core domain JR895_RS17650 PF13936 Helix-turn-helix domain JR895_RS17655 PF00589 Phage integrase family JR895_RS17690 PF01381 Helix-turn-helix JR895_RS17705 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JR895_RS17715 PF00171 Aldehyde dehydrogenase family JR895_RS17720 PF01472 PUA domain JR895_RS17720 PF00696 Amino acid kinase family JR895_RS17725 PF00267 Gram-negative porin JR895_RS17730 PF07417 Sigma factor-binding transcriptional regulator Crl JR895_RS17735 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) JR895_RS17740 PF00156 Phosphoribosyl transferase domain JR895_RS17745 PF07687 Peptidase dimerisation domain JR895_RS17745 PF01546 Peptidase family M20/M25/M40 JR895_RS17760 PF13673 Acetyltransferase (GNAT) domain JR895_RS17765 PF13957 Toxin YafO, type II toxin-antitoxin system JR895_RS17775 PF00817 impB/mucB/samB family JR895_RS17775 PF11799 impB/mucB/samB family C-terminal domain JR895_RS17775 PF11798 IMS family HHH motif JR895_RS17780 PF13677 Membrane MotB of proton-channel complex MotA/MotB JR895_RS17780 PF00691 OmpA family JR895_RS17795 PF00877 NlpC/P60 family JR895_RS17800 PF04221 RelB antitoxin JR895_RS17805 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ JR895_RS17810 PF03734 L,D-transpeptidase catalytic domain JR895_RS17815 PF13230 Glutamine amidotransferases class-II JR895_RS17820 PF13580 SIS domain JR895_RS17825 PF09317 Domain of unknown function (DUF1974) JR895_RS17825 PF02770 Acyl-CoA dehydrogenase, middle domain JR895_RS17825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JR895_RS17825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JR895_RS17835 PF00795 Carbon-nitrogen hydrolase JR895_RS17840 PF01609 Transposase DDE domain JR895_RS17840 PF13808 DDE_Tnp_1-associated JR895_RS17855 PF04717 Type VI secretion system, phage-baseplate injector JR895_RS17860 PF05638 Type VI secretion system effector, Hcp JR895_RS17875 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JR895_RS17895 PF05638 Type VI secretion system effector, Hcp JR895_RS17915 PF13356 Arm DNA-binding domain JR895_RS17915 PF00589 Phage integrase family JR895_RS17930 PF13148 Protein of unknown function (DUF3987) JR895_RS17965 PF17782 DprA winged helix domain JR895_RS17965 PF02481 DNA recombination-mediator protein A JR895_RS17975 PF08479 POTRA domain, ShlB-type JR895_RS17975 PF17287 POTRA domain JR895_RS17975 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JR895_RS17980 PF03737 Aldolase/RraA JR895_RS17985 PF00171 Aldehyde dehydrogenase family JR895_RS17985 PF00465 Iron-containing alcohol dehydrogenase JR895_RS17990 PF02779 Transketolase, pyrimidine binding domain JR895_RS17990 PF02780 Transketolase, C-terminal domain JR895_RS17995 PF00456 Transketolase, thiamine diphosphate binding domain JR895_RS18005 PF07690 Major Facilitator Superfamily JR895_RS18010 PF03466 LysR substrate binding domain JR895_RS18010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS18015 PF00392 Bacterial regulatory proteins, gntR family JR895_RS18015 PF07702 UTRA domain JR895_RS18020 PF01380 SIS domain JR895_RS18025 PF00294 pfkB family carbohydrate kinase JR895_RS18030 PF03605 Anaerobic c4-dicarboxylate membrane transporter JR895_RS18035 PF00710 Asparaginase, N-terminal JR895_RS18035 PF17763 Glutaminase/Asparaginase C-terminal domain JR895_RS18065 PF00005 ABC transporter JR895_RS18065 PF08402 TOBE domain JR895_RS18070 PF02574 Homocysteine S-methyltransferase JR895_RS18075 PF00324 Amino acid permease JR895_RS18095 PF01926 50S ribosome-binding GTPase JR895_RS18100 PF06067 Domain of unknown function (DUF932) JR895_RS18105 PF13280 WYL domain JR895_RS18105 PF08220 DeoR-like helix-turn-helix domain JR895_RS18125 PF06006 Bacterial protein of unknown function (DUF905) JR895_RS18130 PF03230 Antirestriction protein JR895_RS18135 PF04002 RadC-like JAB domain JR895_RS18140 PF06174 Protein of unknown function (DUF987) JR895_RS18145 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A JR895_RS18155 PF06755 CbtA_toxin of type IV toxin-antitoxin system JR895_RS18180 PF00929 Exonuclease JR895_RS18185 PF00075 RNase H JR895_RS18190 PF08241 Methyltransferase domain JR895_RS18195 PF00753 Metallo-beta-lactamase superfamily JR895_RS18195 PF16123 Hydroxyacylglutathione hydrolase C-terminus JR895_RS18200 PF01476 LysM domain JR895_RS18200 PF01464 Transglycosylase SLT domain JR895_RS18210 PF03372 Endonuclease/Exonuclease/phosphatase family JR895_RS18215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS18215 PF03466 LysR substrate binding domain JR895_RS18220 PF00248 Aldo/keto reductase family JR895_RS18260 PF09383 NIL domain JR895_RS18260 PF00005 ABC transporter JR895_RS18265 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS18270 PF03180 NLPA lipoprotein JR895_RS18275 PF16358 RcsF lipoprotein JR895_RS18280 PF01980 tRNA-methyltransferase O JR895_RS18280 PF18389 TrmO C-terminal domain JR895_RS18285 PF04073 Aminoacyl-tRNA editing domain JR895_RS18285 PF03129 Anticodon binding domain JR895_RS18285 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JR895_RS18290 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family JR895_RS18295 PF17185 NlpE C-terminal OB domain JR895_RS18295 PF04170 NlpE N-terminal domain JR895_RS18300 PF00472 RF-1 domain JR895_RS18305 PF07152 YaeQ protein JR895_RS18310 PF06786 Uncharacterised protein family (UPF0253) JR895_RS18315 PF07073 Modulator of Rho-dependent transcription termination (ROF) JR895_RS18320 PF11734 TilS substrate C-terminal domain JR895_RS18320 PF09179 TilS substrate binding domain JR895_RS18320 PF01171 PP-loop family JR895_RS18325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JR895_RS18330 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JR895_RS18330 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JR895_RS18330 PF01276 Orn/Lys/Arg decarboxylase, major domain JR895_RS18335 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JR895_RS18340 PF07733 Bacterial DNA polymerase III alpha NTPase domain JR895_RS18340 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JR895_RS18340 PF14579 Helix-hairpin-helix motif JR895_RS18340 PF02811 PHP domain JR895_RS18340 PF01336 OB-fold nucleic acid binding domain JR895_RS18345 PF01351 Ribonuclease HII JR895_RS18350 PF02684 Lipid-A-disaccharide synthetase JR895_RS18355 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JR895_RS18355 PF00132 Bacterial transferase hexapeptide (six repeats) JR895_RS18360 PF07977 FabA-like domain JR895_RS18365 PF00132 Bacterial transferase hexapeptide (six repeats) JR895_RS18365 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JR895_RS18370 PF03938 Outer membrane protein (OmpH-like) JR895_RS18375 PF07244 Surface antigen variable number repeat JR895_RS18375 PF01103 Surface antigen JR895_RS18380 PF02163 Peptidase family M50 JR895_RS18380 PF17820 PDZ domain JR895_RS18390 PF01255 Putative undecaprenyl diphosphate synthase JR895_RS18395 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JR895_RS18395 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JR895_RS18395 PF13288 DXP reductoisomerase C-terminal domain JR895_RS18400 PF01765 Ribosome recycling factor JR895_RS18405 PF00696 Amino acid kinase family JR895_RS18410 PF00889 Elongation factor TS JR895_RS18415 PF00318 Ribosomal protein S2 JR895_RS18420 PF00557 Metallopeptidase family M24 JR895_RS18425 PF01842 ACT domain JR895_RS18425 PF08335 GlnD PII-uridylyltransferase JR895_RS18425 PF01909 Nucleotidyltransferase domain JR895_RS18425 PF01966 HD domain JR895_RS18430 PF14602 Hexapeptide repeat of succinyl-transferase JR895_RS18430 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JR895_RS18430 PF00132 Bacterial transferase hexapeptide (six repeats) JR895_RS18435 PF00149 Calcineurin-like phosphoesterase JR895_RS18440 PF11944 Protein of unknown function (DUF3461) JR895_RS18445 PF05651 Putative sugar diacid recognition JR895_RS18445 PF17853 GGDEF-like domain JR895_RS18445 PF13556 PucR C-terminal helix-turn-helix domain JR895_RS18450 PF00595 PDZ domain JR895_RS18455 PF13286 Phosphohydrolase-associated domain JR895_RS18455 PF01966 HD domain JR895_RS18460 PF01048 Phosphorylase superfamily JR895_RS18465 PF01497 Periplasmic binding protein JR895_RS18470 PF03458 UPF0126 domain JR895_RS18475 PF01521 Iron-sulphur cluster biosynthesis JR895_RS18485 PF00654 Voltage gated chloride channel JR895_RS18490 PF00202 Aminotransferase class-III JR895_RS18495 PF01032 FecCD transport family JR895_RS18500 PF01497 Periplasmic binding protein JR895_RS18505 PF00005 ABC transporter JR895_RS18510 PF07715 TonB-dependent Receptor Plug Domain JR895_RS18510 PF00593 TonB dependent receptor JR895_RS18515 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal JR895_RS18515 PF00912 Transglycosylase JR895_RS18515 PF14814 Bifunctional transglycosylase second domain JR895_RS18515 PF00905 Penicillin binding protein transpeptidase domain JR895_RS18520 PF08482 ATP-dependent helicase C-terminal JR895_RS18520 PF00271 Helicase conserved C-terminal domain JR895_RS18520 PF04408 Helicase associated domain (HA2) JR895_RS18520 PF00270 DEAD/DEAH box helicase JR895_RS18525 PF02834 LigT like Phosphoesterase JR895_RS18530 PF17746 SfsA N-terminal OB domain JR895_RS18530 PF03749 Sugar fermentation stimulation protein RE domain JR895_RS18535 PF01258 Prokaryotic dksA/traR C4-type zinc finger JR895_RS18540 PF00749 tRNA synthetases class I (E and Q), catalytic domain JR895_RS18545 PF12626 Polymerase A arginine-rich C-terminus JR895_RS18545 PF01743 Poly A polymerase head domain JR895_RS18545 PF12627 Probable RNA and SrmB- binding site of polymerase A JR895_RS18550 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JR895_RS18555 PF00419 Fimbrial protein JR895_RS18560 PF02753 Pili assembly chaperone PapD, C-terminal domain JR895_RS18560 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JR895_RS18565 PF00577 Outer membrane usher protein JR895_RS18565 PF13954 PapC N-terminal domain JR895_RS18565 PF13953 PapC C-terminal domain JR895_RS18570 PF00419 Fimbrial protein JR895_RS18575 PF00419 Fimbrial protein JR895_RS18580 PF00419 Fimbrial protein JR895_RS18585 PF00419 Fimbrial protein JR895_RS18590 PF02548 Ketopantoate hydroxymethyltransferase JR895_RS18595 PF02569 Pantoate-beta-alanine ligase JR895_RS18600 PF04754 Putative transposase, YhgA-like JR895_RS18605 PF02261 Aspartate decarboxylase JR895_RS18610 PF01522 Polysaccharide deacetylase JR895_RS18615 PF03610 PTS system fructose IIA component JR895_RS18620 PF01061 ABC-2 type transporter JR895_RS18625 PF00005 ABC transporter JR895_RS18630 PF00484 Carbonic anhydrase JR895_RS18635 PF00156 Phosphoribosyl transferase domain JR895_RS18640 PF01011 PQQ enzyme repeat JR895_RS18645 PF07732 Multicopper oxidase JR895_RS18645 PF00394 Multicopper oxidase JR895_RS18645 PF07731 Multicopper oxidase JR895_RS18650 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) JR895_RS18655 PF17284 Spermidine synthase tetramerisation domain JR895_RS18660 PF02675 S-adenosylmethionine decarboxylase JR895_RS18665 PF06062 Uncharacterised protein family (UPF0231) JR895_RS18670 PF11791 Aconitate B N-terminal domain JR895_RS18670 PF06434 Aconitate hydratase 2 N-terminus JR895_RS18670 PF00330 Aconitase family (aconitate hydratase) JR895_RS18675 PF11737 Protein of unknown function (DUF3300) JR895_RS18680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JR895_RS18680 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR895_RS18685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JR895_RS18685 PF00364 Biotin-requiring enzyme JR895_RS18685 PF02817 e3 binding domain JR895_RS18690 PF00456 Transketolase, thiamine diphosphate binding domain JR895_RS18690 PF17831 Pyruvate dehydrogenase E1 component middle domain JR895_RS18695 PF07729 FCD domain JR895_RS18695 PF00392 Bacterial regulatory proteins, gntR family JR895_RS18700 PF00324 Amino acid permease JR895_RS18705 PF17113 Regulatory signalling modulator protein AmpE JR895_RS18710 PF01510 N-acetylmuramoyl-L-alanine amidase JR895_RS18715 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JR895_RS18715 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JR895_RS18720 PF07963 Prokaryotic N-terminal methylation motif JR895_RS18730 PF00482 Type II secretion system (T2SS), protein F JR895_RS18735 PF00478 IMP dehydrogenase / GMP reductase domain JR895_RS18745 PF01121 Dephospho-CoA kinase JR895_RS18750 PF07072 Cell division protein JR895_RS18755 PF03884 DNA gyrase inhibitor YacG JR895_RS18760 PF00293 NUDIX domain JR895_RS18765 PF02810 SEC-C motif JR895_RS18765 PF07517 SecA DEAD-like domain JR895_RS18765 PF01043 SecA preprotein cross-linking domain JR895_RS18765 PF07516 SecA Wing and Scaffold domain JR895_RS18770 PF06558 Secretion monitor precursor protein (SecM) JR895_RS18775 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JR895_RS18780 PF00091 Tubulin/FtsZ family, GTPase domain JR895_RS18780 PF12327 FtsZ family, C-terminal domain JR895_RS18785 PF02491 SHS2 domain inserted in FTSA JR895_RS18790 PF08478 POTRA domain, FtsQ-type JR895_RS18790 PF03799 Cell division protein FtsQ JR895_RS18795 PF07478 D-ala D-ala ligase C-terminus JR895_RS18795 PF01820 D-ala D-ala ligase N-terminus JR895_RS18800 PF01225 Mur ligase family, catalytic domain JR895_RS18800 PF02875 Mur ligase family, glutamate ligase domain JR895_RS18800 PF08245 Mur ligase middle domain JR895_RS18805 PF04101 Glycosyltransferase family 28 C-terminal domain JR895_RS18805 PF03033 Glycosyltransferase family 28 N-terminal domain JR895_RS18810 PF01098 Cell cycle protein JR895_RS18815 PF08245 Mur ligase middle domain JR895_RS18815 PF02875 Mur ligase family, glutamate ligase domain JR895_RS18820 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JR895_RS18820 PF00953 Glycosyl transferase family 4 JR895_RS18825 PF08245 Mur ligase middle domain JR895_RS18825 PF02875 Mur ligase family, glutamate ligase domain JR895_RS18825 PF01225 Mur ligase family, catalytic domain JR895_RS18830 PF01225 Mur ligase family, catalytic domain JR895_RS18830 PF08245 Mur ligase middle domain JR895_RS18830 PF02875 Mur ligase family, glutamate ligase domain JR895_RS18835 PF03717 Penicillin-binding Protein dimerisation domain JR895_RS18835 PF00905 Penicillin binding protein transpeptidase domain JR895_RS18840 PF04999 Cell division protein FtsL JR895_RS18845 PF01795 MraW methylase family JR895_RS18850 PF02381 MraZ protein, putative antitoxin-like JR895_RS18855 PF00356 Bacterial regulatory proteins, lacI family JR895_RS18855 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JR895_RS18865 PF10369 Small subunit of acetolactate synthase JR895_RS18870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JR895_RS18870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JR895_RS18870 PF00205 Thiamine pyrophosphate enzyme, central domain JR895_RS18880 PF03466 LysR substrate binding domain JR895_RS18880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS18885 PF08054 Leucine operon leader peptide JR895_RS18890 PF08502 LeuA allosteric (dimerisation) domain JR895_RS18890 PF00682 HMGL-like JR895_RS18895 PF00180 Isocitrate/isopropylmalate dehydrogenase JR895_RS18900 PF00330 Aconitase family (aconitate hydratase) JR895_RS18905 PF00694 Aconitase C-terminal domain JR895_RS18910 PF07690 Major Facilitator Superfamily JR895_RS18920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JR895_RS18920 PF12793 Sugar transport-related sRNA regulator N-term JR895_RS18930 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS18935 PF00005 ABC transporter JR895_RS18940 PF09335 SNARE associated Golgi protein JR895_RS18945 PF12833 Helix-turn-helix domain JR895_RS18945 PF02311 AraC-like ligand binding domain JR895_RS18950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JR895_RS18955 PF02610 L-arabinose isomerase JR895_RS18955 PF11762 L-arabinose isomerase C-terminal domain JR895_RS18960 PF00596 Class II Aldolase and Adducin N-terminal domain JR895_RS18965 PF00136 DNA polymerase family B JR895_RS18965 PF03104 DNA polymerase family B, exonuclease domain JR895_RS18970 PF18337 RapA N-terminal Tudor like domain JR895_RS18970 PF12137 RNA polymerase recycling family C-terminal JR895_RS18970 PF00271 Helicase conserved C-terminal domain JR895_RS18970 PF00176 SNF2 family N-terminal domain JR895_RS18970 PF18339 RapA N-terminal Tudor like domain 1 JR895_RS18975 PF00849 RNA pseudouridylate synthase JR895_RS18980 PF00226 DnaJ domain JR895_RS18980 PF05099 Tellurite resistance protein TerB JR895_RS18985 PF04453 LPS transport system D JR895_RS18985 PF03968 OstA-like protein JR895_RS18990 PF09312 SurA N-terminal domain JR895_RS18990 PF00639 PPIC-type PPIASE domain JR895_RS18995 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JR895_RS19000 PF00398 Ribosomal RNA adenine dimethylase JR895_RS19005 PF04379 ApaG domain JR895_RS19010 PF00149 Calcineurin-like phosphoesterase JR895_RS19015 PF00186 Dihydrofolate reductase JR895_RS19020 PF00999 Sodium/hydrogen exchanger family JR895_RS19020 PF02254 TrkA-N domain JR895_RS19025 PF02525 Flavodoxin-like fold JR895_RS19030 PF00083 Sugar (and other) transporter JR895_RS19040 PF01494 FAD binding domain JR895_RS19045 PF01012 Electron transfer flavoprotein domain JR895_RS19045 PF00766 Electron transfer flavoprotein FAD-binding domain JR895_RS19050 PF01012 Electron transfer flavoprotein domain JR895_RS19055 PF02028 BCCT, betaine/carnitine/choline family transporter JR895_RS19060 PF02770 Acyl-CoA dehydrogenase, middle domain JR895_RS19060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JR895_RS19060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JR895_RS19065 PF02515 CoA-transferase family III JR895_RS19070 PF13193 AMP-binding enzyme C-terminal domain JR895_RS19070 PF00501 AMP-binding enzyme JR895_RS19075 PF00378 Enoyl-CoA hydratase/isomerase JR895_RS19080 PF00132 Bacterial transferase hexapeptide (six repeats) JR895_RS19085 PF07180 CaiF/GrlA transcriptional regulator JR895_RS19090 PF02142 MGS-like domain JR895_RS19090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JR895_RS19090 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JR895_RS19095 PF00117 Glutamine amidotransferase class-I JR895_RS19095 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JR895_RS19100 PF05173 Dihydrodipicolinate reductase, C-terminus JR895_RS19100 PF01113 Dihydrodipicolinate reductase, N-terminus JR895_RS19105 PF01156 Inosine-uridine preferring nucleoside hydrolase JR895_RS19110 PF02401 LytB protein JR895_RS19115 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JR895_RS19120 PF01252 Signal peptidase (SPase) II JR895_RS19125 PF00133 tRNA synthetases class I (I, L, M and V) JR895_RS19125 PF08264 Anticodon-binding domain of tRNA JR895_RS19125 PF06827 Zinc finger found in FPG and IleRS JR895_RS19130 PF06574 FAD synthetase JR895_RS19130 PF01687 Riboflavin kinase JR895_RS19135 PF10837 Protein of unknown function (DUF2575) JR895_RS19140 PF01649 Ribosomal protein S20 JR895_RS19160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS19160 PF03466 LysR substrate binding domain JR895_RS19165 PF06965 Na+/H+ antiporter 1 JR895_RS19170 PF01848 Hok/gef family JR895_RS19175 PF01609 Transposase DDE domain JR895_RS19180 PF00684 DnaJ central domain JR895_RS19180 PF01556 DnaJ C terminal domain JR895_RS19180 PF00226 DnaJ domain JR895_RS19185 PF00012 Hsp70 protein JR895_RS19190 PF10807 Protein of unknown function (DUF2541) JR895_RS19195 PF13099 Domain of unknown function (DUF3944) JR895_RS19195 PF03981 Ubiquinol-cytochrome C chaperone JR895_RS19200 PF01184 GPR1/FUN34/yaaH family JR895_RS19205 PF00994 Probable molybdopterin binding domain JR895_RS19210 PF00923 Transaldolase/Fructose-6-phosphate aldolase JR895_RS19215 PF01235 Sodium:alanine symporter family JR895_RS19220 PF03883 Peroxide stress protein YaaA JR895_RS19225 PF10697 Protein of unknown function (DUF2502) JR895_RS19230 PF00291 Pyridoxal-phosphate dependent enzyme JR895_RS19230 PF14821 Threonine synthase N terminus JR895_RS19235 PF00288 GHMP kinases N terminal domain JR895_RS19235 PF08544 GHMP kinases C terminal JR895_RS19240 PF13840 ACT domain JR895_RS19240 PF01842 ACT domain JR895_RS19240 PF00696 Amino acid kinase family JR895_RS19240 PF03447 Homoserine dehydrogenase, NAD binding domain JR895_RS19240 PF00742 Homoserine dehydrogenase JR895_RS19245 PF08254 Threonine leader peptide JR895_RS19250 PF00588 SpoU rRNA Methylase family JR895_RS19260 PF00072 Response regulator receiver domain JR895_RS19260 PF00486 Transcriptional regulatory protein, C terminal JR895_RS19265 PF06123 Inner membrane protein CreD JR895_RS19270 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS19270 PF00672 HAMP domain JR895_RS19270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS19275 PF00486 Transcriptional regulatory protein, C terminal JR895_RS19275 PF00072 Response regulator receiver domain JR895_RS19280 PF05981 CreA protein JR895_RS19285 PF12833 Helix-turn-helix domain JR895_RS19285 PF06445 GyrI-like small molecule binding domain JR895_RS19290 PF00300 Histidine phosphatase superfamily (branch 1) JR895_RS19295 PF01931 Protein of unknown function DUF84 JR895_RS19300 PF01371 Trp repressor protein JR895_RS19305 PF14718 Soluble lytic murein transglycosylase L domain JR895_RS19305 PF01464 Transglycosylase SLT domain JR895_RS19310 PF12848 ABC transporter JR895_RS19310 PF00005 ABC transporter JR895_RS19315 PF01381 Helix-turn-helix JR895_RS19315 PF13521 AAA domain JR895_RS19320 PF18073 Rubredoxin metal binding domain JR895_RS19325 PF18429 Domain of unknown function (DUF5609) JR895_RS19330 PF10144 Bacterial virulence factor haemolysin JR895_RS19335 PF10437 Bacterial lipoate protein ligase C-terminus JR895_RS19335 PF03099 Biotin/lipoate A/B protein ligase family JR895_RS19345 PF01048 Phosphorylase superfamily JR895_RS19350 PF01676 Metalloenzyme superfamily JR895_RS19355 PF02885 Glycosyl transferase family, helical bundle domain JR895_RS19355 PF00591 Glycosyl transferase family, a/b domain JR895_RS19355 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JR895_RS19360 PF01791 DeoC/LacD family aldolase JR895_RS19365 PF11230 Protein of unknown function (DUF3029) JR895_RS19370 PF04055 Radical SAM superfamily JR895_RS19375 PF01026 TatD related DNase JR895_RS19380 PF01734 Patatin-like phospholipase JR895_RS19385 PF07043 Protein of unknown function (DUF1328) JR895_RS19390 PF04972 BON domain JR895_RS19395 PF00009 Elongation factor Tu GTP binding domain JR895_RS19395 PF03144 Elongation factor Tu domain 2 JR895_RS19395 PF16658 Class II release factor RF3, C-terminal domain JR895_RS19400 PF13419 Haloacid dehalogenase-like hydrolase JR895_RS19405 PF00583 Acetyltransferase (GNAT) family JR895_RS19410 PF03603 DNA polymerase III psi subunit JR895_RS19415 PF05175 Methyltransferase small domain JR895_RS19415 PF08468 Methyltransferase small domain N-terminal JR895_RS19435 PF07256 Protein of unknown function (DUF1435) JR895_RS19440 PF06276 Ferric iron reductase FhuF-like transporter JR895_RS19440 PF11575 FhuF 2Fe-2S C-terminal domain JR895_RS19445 PF00196 Bacterial regulatory proteins, luxR family JR895_RS19450 PF00196 Bacterial regulatory proteins, luxR family JR895_RS19455 PF06738 Putative threonine/serine exporter JR895_RS19460 PF12821 Threonine/Serine exporter, ThrE JR895_RS19465 PF17948 DnaT DNA-binding domain JR895_RS19470 PF01695 IstB-like ATP binding protein JR895_RS19475 PF10696 Protein of unknown function (DUF2501) JR895_RS19480 PF00884 Sulfatase JR895_RS19485 PF08240 Alcohol dehydrogenase GroES-like domain JR895_RS19485 PF00107 Zinc-binding dehydrogenase JR895_RS19490 PF00392 Bacterial regulatory proteins, gntR family JR895_RS19490 PF07729 FCD domain JR895_RS19495 PF00999 Sodium/hydrogen exchanger family JR895_RS19500 PF03480 Bacterial extracellular solute-binding protein, family 7 JR895_RS19510 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JR895_RS19515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JR895_RS19515 PF00672 HAMP domain JR895_RS19515 PF02203 Tar ligand binding domain homologue JR895_RS19520 PF01047 MarR family JR895_RS19525 PF01557 Fumarylacetoacetate (FAA) hydrolase family JR895_RS19530 PF00171 Aldehyde dehydrogenase family JR895_RS19535 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JR895_RS19540 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase JR895_RS19545 PF01557 Fumarylacetoacetate (FAA) hydrolase family JR895_RS19550 PF03328 HpcH/HpaI aldolase/citrate lyase family JR895_RS19555 PF07690 Major Facilitator Superfamily JR895_RS19565 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JR895_RS19565 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JR895_RS19570 PF01613 Flavin reductase like domain JR895_RS19575 PF13722 5TM C-terminal transporter carbon starvation CstA JR895_RS19575 PF02554 Carbon starvation protein CstA JR895_RS19580 PF04328 Selenoprotein, putative JR895_RS19585 PF07683 Cobalamin synthesis protein cobW C-terminal domain JR895_RS19585 PF02492 CobW/HypB/UreG, nucleotide-binding domain JR895_RS19600 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) JR895_RS19600 PF00271 Helicase conserved C-terminal domain JR895_RS19600 PF08463 EcoEI R protein C-terminal JR895_RS19600 PF04851 Type III restriction enzyme, res subunit JR895_RS19610 PF01420 Type I restriction modification DNA specificity domain JR895_RS19615 PF08845 Toxin SymE, type I toxin-antitoxin system JR895_RS19625 PF06568 Domain of unknown function (DUF1127) JR895_RS19630 PF00155 Aminotransferase class I and II JR895_RS19630 PF00392 Bacterial regulatory proteins, gntR family JR895_RS19635 PF04754 Putative transposase, YhgA-like JR895_RS19640 PF07690 Major Facilitator Superfamily JR895_RS19645 PF04286 Protein of unknown function (DUF445) JR895_RS19650 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component JR895_RS19655 PF01869 BadF/BadG/BcrA/BcrD ATPase family JR895_RS19660 PF11823 Protein of unknown function (DUF3343) JR895_RS19665 PF06977 SdiA-regulated JR895_RS19670 PF06779 Uncharacterised MFS-type transporter YbfB JR895_RS19675 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family JR895_RS19680 PF07670 Nucleoside recognition JR895_RS19685 PF07670 Nucleoside recognition JR895_RS19690 PF01979 Amidohydrolase family JR895_RS19695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS19695 PF03466 LysR substrate binding domain JR895_RS19700 PF04965 Gene 25-like lysozyme JR895_RS19710 PF10887 Protein of unknown function (DUF2686) JR895_RS19715 PF07729 FCD domain JR895_RS19715 PF00392 Bacterial regulatory proteins, gntR family JR895_RS19720 PF08125 Mannitol dehydrogenase C-terminal domain JR895_RS19720 PF01232 Mannitol dehydrogenase Rossmann domain JR895_RS19725 PF03786 D-mannonate dehydratase (UxuA) JR895_RS19735 PF09160 FimH, mannose binding JR895_RS19735 PF00419 Fimbrial protein JR895_RS19745 PF00419 Fimbrial protein JR895_RS19750 PF13953 PapC C-terminal domain JR895_RS19750 PF00577 Outer membrane usher protein JR895_RS19750 PF13954 PapC N-terminal domain JR895_RS19755 PF02753 Pili assembly chaperone PapD, C-terminal domain JR895_RS19755 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JR895_RS19760 PF00419 Fimbrial protein JR895_RS19765 PF01609 Transposase DDE domain JR895_RS19770 PF00419 Fimbrial protein JR895_RS19775 PF00589 Phage integrase family JR895_RS19780 PF00589 Phage integrase family JR895_RS19785 PF06178 Oligogalacturonate-specific porin protein (KdgM) JR895_RS19795 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase JR895_RS19805 PF01381 Helix-turn-helix JR895_RS19820 PF00239 Resolvase, N terminal domain JR895_RS19820 PF02796 Helix-turn-helix domain of resolvase JR895_RS19845 PF00107 Zinc-binding dehydrogenase JR895_RS19845 PF08240 Alcohol dehydrogenase GroES-like domain JR895_RS19850 PF05872 Bacterial protein of unknown function (DUF853) JR895_RS19855 PF03739 Lipopolysaccharide export system permease LptF/LptG JR895_RS19860 PF03739 Lipopolysaccharide export system permease LptF/LptG JR895_RS19865 PF02789 Cytosol aminopeptidase family, N-terminal domain JR895_RS19865 PF00883 Cytosol aminopeptidase family, catalytic domain JR895_RS19870 PF04364 DNA polymerase III chi subunit, HolC JR895_RS19875 PF08264 Anticodon-binding domain of tRNA JR895_RS19875 PF00133 tRNA synthetases class I (I, L, M and V) JR895_RS19875 PF10458 Valyl tRNA synthetase tRNA binding arm JR895_RS19880 PF05987 Bacterial protein of unknown function (DUF898) JR895_RS19885 PF00583 Acetyltransferase (GNAT) family JR895_RS19890 PF06877 Regulator of ribonuclease activity B JR895_RS19895 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JR895_RS19895 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JR895_RS19905 PF04074 YhcH/YjgK/YiaL JR895_RS19910 PF00440 Bacterial regulatory proteins, tetR family JR895_RS19920 PF01042 Endoribonuclease L-PSP JR895_RS19925 PF08052 PyrBI operon leader peptide JR895_RS19930 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JR895_RS19930 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JR895_RS19935 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain JR895_RS19935 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain JR895_RS19940 PF01042 Endoribonuclease L-PSP JR895_RS19945 PF00689 Cation transporting ATPase, C-terminus JR895_RS19945 PF00690 Cation transporter/ATPase, N-terminus JR895_RS19950 PF17059 MgtA leader peptide JR895_RS19955 PF00356 Bacterial regulatory proteins, lacI family JR895_RS19960 PF02378 Phosphotransferase system, EIIC JR895_RS19960 PF00367 phosphotransferase system, EIIB JR895_RS19965 PF00128 Alpha amylase, catalytic domain JR895_RS19965 PF11941 Domain of unknown function (DUF3459) JR895_RS19970 PF03477 ATP cone domain JR895_RS19970 PF13597 Anaerobic ribonucleoside-triphosphate reductase JR895_RS19980 PF07361 Cytochrome b562 JR895_RS19985 PF01523 Putative modulator of DNA gyrase JR895_RS19990 PF04751 Protein of unknown function (DUF615) JR895_RS19995 PF02875 Mur ligase family, glutamate ligase domain JR895_RS19995 PF08245 Mur ligase middle domain JR895_RS19995 PF01225 Mur ligase family, catalytic domain JR895_RS20000 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JR895_RS20005 PF02653 Branched-chain amino acid transport system / permease component JR895_RS20010 PF02653 Branched-chain amino acid transport system / permease component JR895_RS20015 PF00005 ABC transporter JR895_RS20020 PF13407 Periplasmic binding protein domain JR895_RS20025 PF00719 Inorganic pyrophosphatase JR895_RS20030 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like JR895_RS20035 PF04357 TamB, inner membrane protein subunit of TAM complex JR895_RS20040 PF17243 POTRA domain TamA domain 1 JR895_RS20040 PF01103 Surface antigen JR895_RS20040 PF07244 Surface antigen variable number repeat JR895_RS20045 PF01625 Peptide methionine sulfoxide reductase JR895_RS20050 PF00571 CBS domain JR895_RS20050 PF03471 Transporter associated domain JR895_RS20050 PF01595 Cyclin M transmembrane N-terminal domain JR895_RS20055 PF06526 Protein of unknown function (DUF1107) JR895_RS20060 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) JR895_RS20065 PF00459 Inositol monophosphatase family JR895_RS20075 PF01638 HxlR-like helix-turn-helix JR895_RS20080 PF05368 NmrA-like family JR895_RS20085 PF00892 EamA-like transporter family JR895_RS20090 PF04405 Domain of Unknown function (DUF542) JR895_RS20090 PF01814 Hemerythrin HHE cation binding domain JR895_RS20095 PF00324 Amino acid permease JR895_RS20100 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JR895_RS20100 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JR895_RS20105 PF04225 Opacity-associated protein A LysM-like domain JR895_RS20105 PF08525 Opacity-associated protein A N-terminal motif JR895_RS20110 PF17938 Tetracyclin repressor-like, C-terminal domain JR895_RS20125 PF00378 Enoyl-CoA hydratase/isomerase JR895_RS20130 PF01144 Coenzyme A transferase JR895_RS20135 PF00890 FAD binding domain JR895_RS20135 PF02910 Fumarate reductase flavoprotein C-term JR895_RS20140 PF07690 Major Facilitator Superfamily JR895_RS20145 PF10887 Protein of unknown function (DUF2686) JR895_RS20150 PF01281 Ribosomal protein L9, N-terminal domain JR895_RS20150 PF03948 Ribosomal protein L9, C-terminal domain JR895_RS20155 PF01084 Ribosomal protein S18 JR895_RS20160 PF00436 Single-strand binding protein family JR895_RS20165 PF01250 Ribosomal protein S6 JR895_RS20170 PF07338 Protein of unknown function (DUF1471) JR895_RS20175 PF00596 Class II Aldolase and Adducin N-terminal domain JR895_RS20180 PF01261 Xylose isomerase-like TIM barrel JR895_RS20185 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JR895_RS20190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JR895_RS20195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JR895_RS20200 PF03611 PTS system sugar-specific permease component JR895_RS20210 PF00455 DeoR C terminal sensor domain JR895_RS20210 PF08220 DeoR-like helix-turn-helix domain JR895_RS20215 PF00326 Prolyl oligopeptidase family JR895_RS20220 PF07338 Protein of unknown function (DUF1471) JR895_RS20225 PF07338 Protein of unknown function (DUF1471) JR895_RS20230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JR895_RS20230 PF18158 Adaptive response protein AidB N-terminal domain JR895_RS20230 PF02770 Acyl-CoA dehydrogenase, middle domain JR895_RS20235 PF03738 Glutathionylspermidine synthase preATP-grasp JR895_RS20240 PF06693 Protein of unknown function (DUF1190) JR895_RS20245 PF03994 Domain of Unknown Function (DUF350) JR895_RS20250 PF10679 Protein of unknown function (DUF2491) JR895_RS20255 PF04012 PspA/IM30 family JR895_RS20260 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) JR895_RS20265 PF08032 RNA 2'-O ribose methyltransferase substrate binding JR895_RS20265 PF00588 SpoU rRNA Methylase family JR895_RS20270 PF00575 S1 RNA binding domain JR895_RS20270 PF08461 Ribonuclease R winged-helix domain JR895_RS20270 PF17876 Cold shock domain JR895_RS20270 PF00773 RNB domain JR895_RS20270 PF08206 Ribonuclease B OB domain JR895_RS20275 PF02082 Transcriptional regulator JR895_RS20280 PF00709 Adenylosuccinate synthetase JR895_RS20285 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) JR895_RS20290 PF01145 SPFH domain / Band 7 family JR895_RS20295 PF12221 Bacterial membrane protein N terminal JR895_RS20295 PF01145 SPFH domain / Band 7 family JR895_RS20300 PF01926 50S ribosome-binding GTPase JR895_RS20300 PF13167 GTP-binding GTPase N-terminal JR895_RS20300 PF16360 GTP-binding GTPase Middle Region JR895_RS20305 PF17209 Hfq protein JR895_RS20315 PF01119 DNA mismatch repair protein, C-terminal domain JR895_RS20315 PF08676 MutL C terminal dimerisation domain JR895_RS20320 PF01520 N-acetylmuramoyl-L-alanine amidase JR895_RS20325 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JR895_RS20330 PF01256 Carbohydrate kinase JR895_RS20330 PF03853 YjeF-related protein N-terminus JR895_RS20335 PF08331 Domain of unknown function (DUF1730) JR895_RS20360 PF00929 Exonuclease JR895_RS20365 PF03193 RsgA GTPase JR895_RS20370 PF02666 Phosphatidylserine decarboxylase JR895_RS20375 PF12795 Mechanosensitive ion channel porin domain JR895_RS20375 PF00924 Mechanosensitive ion channel JR895_RS20375 PF12794 Mechanosensitive ion channel inner membrane domain 1 JR895_RS20380 PF13520 Amino acid permease JR895_RS20385 PF00152 tRNA synthetases class II (D, K and N) JR895_RS20390 PF00890 FAD binding domain JR895_RS20390 PF02910 Fumarate reductase flavoprotein C-term JR895_RS20395 PF13183 4Fe-4S dicluster domain JR895_RS20395 PF13085 2Fe-2S iron-sulfur cluster binding domain JR895_RS20400 PF02300 Fumarate reductase subunit C JR895_RS20405 PF02313 Fumarate reductase subunit D JR895_RS20410 PF00144 Beta-lactamase JR895_RS20415 PF08212 Lipocalin-like domain JR895_RS20420 PF00893 Small Multidrug Resistance protein JR895_RS20425 PF08085 Entericidin EcnA/B family JR895_RS20430 PF08085 Entericidin EcnA/B family JR895_RS20435 PF08207 Elongation factor P (EF-P) KOW-like domain JR895_RS20435 PF01132 Elongation factor P (EF-P) OB domain JR895_RS20435 PF09285 Elongation factor P, C-terminal JR895_RS20440 PF04055 Radical SAM superfamily JR895_RS20445 PF15922 YjeJ-like JR895_RS20450 PF13698 Domain of unknown function (DUF4156) JR895_RS20455 PF00118 TCP-1/cpn60 chaperonin family JR895_RS20460 PF00166 Chaperonin 10 Kd subunit JR895_RS20465 PF13520 Amino acid permease JR895_RS20470 PF04186 FxsA cytoplasmic membrane protein JR895_RS20475 PF00206 Lyase JR895_RS20475 PF10415 Fumarase C C-terminus JR895_RS20480 PF03605 Anaerobic c4-dicarboxylate membrane transporter JR895_RS20485 PF03091 CutA1 divalent ion tolerance protein JR895_RS20490 PF02683 Cytochrome C biogenesis protein transmembrane region JR895_RS20490 PF11412 Disulphide bond corrector protein DsbC JR895_RS20505 PF00486 Transcriptional regulatory protein, C terminal JR895_RS20505 PF18500 CadC C-terminal domain 1 JR895_RS20510 PF13520 Amino acid permease JR895_RS20515 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JR895_RS20515 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JR895_RS20515 PF01276 Orn/Lys/Arg decarboxylase, major domain JR895_RS20520 PF00854 POT family JR895_RS20525 PF00152 tRNA synthetases class II (D, K and N) JR895_RS20525 PF01336 OB-fold nucleic acid binding domain JR895_RS20530 PF10753 Toxin GhoT_OrtT JR895_RS20535 PF11080 Endoribonuclease GhoS JR895_RS20540 PF14542 GCN5-related N-acetyl-transferase JR895_RS20545 PF06902 Divergent 4Fe-4S mono-cluster JR895_RS20550 PF00989 PAS fold JR895_RS20550 PF17203 Single cache domain 3 JR895_RS20550 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JR895_RS20550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS20555 PF00072 Response regulator receiver domain JR895_RS20560 PF03605 Anaerobic c4-dicarboxylate membrane transporter JR895_RS20565 PF05681 Fumarate hydratase (Fumerase) JR895_RS20565 PF05683 Fumarase C-terminus JR895_RS20570 PF09997 Predicted membrane protein (DUF2238) JR895_RS20580 PF02056 Family 4 glycosyl hydrolase JR895_RS20580 PF11975 Family 4 glycosyl hydrolase C-terminal domain JR895_RS20585 PF12833 Helix-turn-helix domain JR895_RS20590 PF01276 Orn/Lys/Arg decarboxylase, major domain JR895_RS20590 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JR895_RS20590 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JR895_RS20595 PF12833 Helix-turn-helix domain JR895_RS20600 PF13520 Amino acid permease JR895_RS20605 PF08019 Phosphoethanolamine transferase EptA/EptB JR895_RS20605 PF00884 Sulfatase JR895_RS20610 PF00486 Transcriptional regulatory protein, C terminal JR895_RS20610 PF00072 Response regulator receiver domain JR895_RS20615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS20615 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS20625 PF08946 Osmosensory transporter coiled coil JR895_RS20625 PF00083 Sugar (and other) transporter JR895_RS20630 PF13990 YjcZ-like protein JR895_RS20635 PF00350 Dynamin family JR895_RS20640 PF08274 PhnA Zinc-Ribbon JR895_RS20640 PF03831 PhnA domain JR895_RS20645 PF06983 3-demethylubiquinone-9 3-methyltransferase JR895_RS20650 PF00005 ABC transporter JR895_RS20665 PF07702 UTRA domain JR895_RS20665 PF00392 Bacterial regulatory proteins, gntR family JR895_RS20670 PF06754 Phosphonate metabolism protein PhnG JR895_RS20675 PF05845 Bacterial phosphonate metabolism protein (PhnH) JR895_RS20680 PF06007 Phosphonate metabolism protein PhnJ JR895_RS20685 PF00005 ABC transporter JR895_RS20690 PF00005 ABC transporter JR895_RS20695 PF07969 Amidohydrolase family JR895_RS20705 PF00583 Acetyltransferase (GNAT) family JR895_RS20710 PF12706 Beta-lactamase superfamily domain JR895_RS20720 PF02502 Ribose/Galactose Isomerase JR895_RS20725 PF01418 Helix-turn-helix domain, rpiR family JR895_RS20725 PF01380 SIS domain JR895_RS20730 PF13407 Periplasmic binding protein domain JR895_RS20735 PF00005 ABC transporter JR895_RS20740 PF02653 Branched-chain amino acid transport system / permease component JR895_RS20745 PF00834 Ribulose-phosphate 3 epimerase family JR895_RS20750 PF00480 ROK family JR895_RS20755 PF14864 Alkyl sulfatase C-terminal JR895_RS20755 PF00753 Metallo-beta-lactamase superfamily JR895_RS20755 PF14863 Alkyl sulfatase dimerisation JR895_RS20760 PF17090 Uncharacterised protein family JR895_RS20765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JR895_RS20765 PF00529 HlyD membrane-fusion protein of T1SS JR895_RS20770 PF04632 Fusaric acid resistance protein family JR895_RS20775 PF02321 Outer membrane efflux protein JR895_RS20785 PF08238 Sel1 repeat JR895_RS20790 PF00375 Sodium:dicarboxylate symporter family JR895_RS20800 PF03918 Cytochrome C biogenesis protein JR895_RS20805 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JR895_RS20805 PF01578 Cytochrome C assembly protein JR895_RS20810 PF03916 Polysulphide reductase, NrfD JR895_RS20815 PF00037 4Fe-4S binding domain JR895_RS20815 PF13247 4Fe-4S dicluster domain JR895_RS20820 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) JR895_RS20820 PF13435 Cytochrome c554 and c-prime JR895_RS20825 PF02335 Cytochrome c552 JR895_RS20830 PF16177 Acetyl-coenzyme A synthetase N-terminus JR895_RS20830 PF00501 AMP-binding enzyme JR895_RS20830 PF13193 AMP-binding enzyme C-terminal domain JR895_RS20835 PF04341 Protein of unknown function, DUF485 JR895_RS20840 PF00474 Sodium:solute symporter family JR895_RS20845 PF00805 Pentapeptide repeats (8 copies) JR895_RS20850 PF00999 Sodium/hydrogen exchanger family JR895_RS20855 PF00860 Permease family JR895_RS20860 PF09278 MerR, DNA binding JR895_RS20860 PF00376 MerR family regulatory protein JR895_RS20865 PF12833 Helix-turn-helix domain JR895_RS20870 PF12792 CSS motif domain associated with EAL JR895_RS20870 PF00563 EAL domain JR895_RS20875 PF15940 Family of unknown function JR895_RS20880 PF00436 Single-strand binding protein family JR895_RS20885 PF00005 ABC transporter JR895_RS20885 PF17755 UvrA DNA-binding domain JR895_RS20885 PF17760 UvrA interaction domain JR895_RS20890 PF04237 YjbR JR895_RS20895 PF01894 Uncharacterised protein family UPF0047 JR895_RS20900 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JR895_RS20910 PF00155 Aminotransferase class I and II JR895_RS20915 PF00842 Alanine racemase, C-terminal domain JR895_RS20915 PF01168 Alanine racemase, N-terminal domain JR895_RS20920 PF00772 DnaB-like helicase N terminal domain JR895_RS20920 PF03796 DnaB-like helicase C terminal domain JR895_RS20925 PF00107 Zinc-binding dehydrogenase JR895_RS20925 PF08240 Alcohol dehydrogenase GroES-like domain JR895_RS20930 PF09583 Phage shock protein G (Phageshock_PspG) JR895_RS20935 PF01207 Dihydrouridine synthase (Dus) JR895_RS20940 PF10897 Protein of unknown function (DUF2713) JR895_RS20945 PF01475 Ferric uptake regulator family JR895_RS20950 PF05532 CsbD-like JR895_RS20955 PF01554 MatE JR895_RS20960 PF01726 LexA DNA binding domain JR895_RS20960 PF00717 Peptidase S24-like JR895_RS20965 PF01219 Prokaryotic diacylglycerol kinase JR895_RS20970 PF01553 Acyltransferase JR895_RS20975 PF01040 UbiA prenyltransferase family JR895_RS20980 PF04345 Chorismate lyase JR895_RS20990 PF07148 Maltose operon periplasmic protein precursor (MalM) JR895_RS20995 PF02264 LamB porin JR895_RS21000 PF00005 ABC transporter JR895_RS21000 PF17912 MalK OB fold domain JR895_RS21005 PF01547 Bacterial extracellular solute-binding protein JR895_RS21010 PF14785 Maltose transport system permease protein MalF P2 domain JR895_RS21010 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS21015 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS21020 PF00083 Sugar (and other) transporter JR895_RS21025 PF06146 Phosphate-starvation-inducible E JR895_RS21035 PF17089 Uncharacterised protein family JR895_RS21040 PF06082 Exopolysaccharide biosynthesis protein YbjH JR895_RS21045 PF06251 Capsule biosynthesis GfcC JR895_RS21050 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF JR895_RS21055 PF11106 Exopolysaccharide production protein YjbE JR895_RS21060 PF00342 Phosphoglucose isomerase JR895_RS21065 PF01842 ACT domain JR895_RS21065 PF00696 Amino acid kinase family JR895_RS21070 PF11656 YjbD family (DUF3811) JR895_RS21075 PF00849 RNA pseudouridylate synthase JR895_RS21075 PF01479 S4 domain JR895_RS21080 PF04198 Putative sugar-binding domain JR895_RS21080 PF13936 Helix-turn-helix domain JR895_RS21090 PF03610 PTS system fructose IIA component JR895_RS21100 PF03609 PTS system sorbose-specific iic component JR895_RS21105 PF03613 PTS system mannose/fructose/sorbose family IID component JR895_RS21110 PF00107 Zinc-binding dehydrogenase JR895_RS21110 PF08240 Alcohol dehydrogenase GroES-like domain JR895_RS21115 PF03575 Peptidase family S51 JR895_RS21120 PF02690 Na+/Pi-cotransporter JR895_RS21125 PF02965 Vitamin B12 dependent methionine synthase, activation domain JR895_RS21125 PF02310 B12 binding domain JR895_RS21125 PF02607 B12 binding domain JR895_RS21125 PF02574 Homocysteine S-methyltransferase JR895_RS21125 PF00809 Pterin binding enzyme JR895_RS21130 PF01614 Bacterial transcriptional regulator JR895_RS21130 PF09339 IclR helix-turn-helix domain JR895_RS21135 PF07906 ShET2 enterotoxin, N-terminal region JR895_RS21135 PF07906 ShET2 enterotoxin, N-terminal region JR895_RS21140 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) JR895_RS21145 PF00463 Isocitrate lyase family JR895_RS21150 PF01274 Malate synthase JR895_RS21155 PF04204 Homoserine O-succinyltransferase JR895_RS21160 PF13673 Acetyltransferase (GNAT) domain JR895_RS21185 PF01808 AICARFT/IMPCHase bienzyme JR895_RS21185 PF02142 MGS-like domain JR895_RS21190 PF02844 Phosphoribosylglycinamide synthetase, N domain JR895_RS21190 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JR895_RS21190 PF02843 Phosphoribosylglycinamide synthetase, C domain JR895_RS21195 PF02954 Bacterial regulatory protein, Fis family JR895_RS21195 PF00072 Response regulator receiver domain JR895_RS21195 PF00158 Sigma-54 interaction domain JR895_RS21200 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS21200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS21205 PF13801 Heavy-metal resistance JR895_RS21210 PF07356 Protein of unknown function (DUF1481) JR895_RS21215 PF00216 Bacterial DNA-binding protein JR895_RS21220 PF04222 Protein of unknown function (DUF416) JR895_RS21225 PF04493 Endonuclease V JR895_RS21230 PF01208 Uroporphyrinogen decarboxylase (URO-D) JR895_RS21235 PF00293 NUDIX domain JR895_RS21235 PF09297 NADH pyrophosphatase zinc ribbon domain JR895_RS21240 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ JR895_RS21245 PF13667 ThiC-associated domain JR895_RS21245 PF01964 Radical SAM ThiC family JR895_RS21250 PF02581 Thiamine monophosphate synthase JR895_RS21255 PF00899 ThiF family JR895_RS21260 PF02597 ThiS family JR895_RS21265 PF05690 Thiazole biosynthesis protein ThiG JR895_RS21270 PF04055 Radical SAM superfamily JR895_RS21270 PF06968 Biotin and Thiamin Synthesis associated domain JR895_RS21280 PF04998 RNA polymerase Rpb1, domain 5 JR895_RS21280 PF05000 RNA polymerase Rpb1, domain 4 JR895_RS21280 PF04983 RNA polymerase Rpb1, domain 3 JR895_RS21280 PF00623 RNA polymerase Rpb1, domain 2 JR895_RS21280 PF04997 RNA polymerase Rpb1, domain 1 JR895_RS21285 PF04563 RNA polymerase beta subunit JR895_RS21285 PF10385 RNA polymerase beta subunit external 1 domain JR895_RS21285 PF04565 RNA polymerase Rpb2, domain 3 JR895_RS21285 PF04561 RNA polymerase Rpb2, domain 2 JR895_RS21285 PF00562 RNA polymerase Rpb2, domain 6 JR895_RS21285 PF04560 RNA polymerase Rpb2, domain 7 JR895_RS21290 PF16320 Ribosomal protein L7/L12 dimerisation domain JR895_RS21290 PF00542 Ribosomal protein L7/L12 C-terminal domain JR895_RS21295 PF00466 Ribosomal protein L10 JR895_RS21300 PF00687 Ribosomal protein L1p/L10e family JR895_RS21305 PF00298 Ribosomal protein L11, RNA binding domain JR895_RS21305 PF03946 Ribosomal protein L11, N-terminal domain JR895_RS21310 PF00467 KOW motif JR895_RS21310 PF02357 Transcription termination factor nusG JR895_RS21315 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JR895_RS21320 PF00009 Elongation factor Tu GTP binding domain JR895_RS21320 PF03144 Elongation factor Tu domain 2 JR895_RS21320 PF03143 Elongation factor Tu C-terminal domain JR895_RS21345 PF00485 Phosphoribulokinase / Uridine kinase family JR895_RS21350 PF08279 HTH domain JR895_RS21350 PF03099 Biotin/lipoate A/B protein ligase family JR895_RS21350 PF02237 Biotin protein ligase C terminal domain JR895_RS21355 PF01565 FAD binding domain JR895_RS21355 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JR895_RS21380 PF01177 Asp/Glu/Hydantoin racemase JR895_RS21385 PF00593 TonB dependent receptor JR895_RS21385 PF07715 TonB-dependent Receptor Plug Domain JR895_RS21390 PF05958 tRNA (Uracil-5-)-methyltransferase JR895_RS21395 PF07226 Protein of unknown function (DUF1422) JR895_RS21400 PF00440 Bacterial regulatory proteins, tetR family JR895_RS21405 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR895_RS21405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JR895_RS21410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS21410 PF03466 LysR substrate binding domain JR895_RS21415 PF14698 Argininosuccinate lyase C-terminal JR895_RS21415 PF00206 Lyase JR895_RS21420 PF00696 Amino acid kinase family JR895_RS21425 PF01118 Semialdehyde dehydrogenase, NAD binding domain JR895_RS21425 PF02774 Semialdehyde dehydrogenase, dimerisation domain JR895_RS21430 PF01546 Peptidase family M20/M25/M40 JR895_RS21430 PF07687 Peptidase dimerisation domain JR895_RS21435 PF00311 Phosphoenolpyruvate carboxylase JR895_RS21440 PF00884 Sulfatase JR895_RS21445 PF12833 Helix-turn-helix domain JR895_RS21450 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JR895_RS21455 PF04055 Radical SAM superfamily JR895_RS21460 PF02901 Pyruvate formate lyase-like JR895_RS21460 PF01228 Glycine radical JR895_RS21465 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JR895_RS21475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JR895_RS21475 PF00391 PEP-utilising enzyme, mobile domain JR895_RS21475 PF05524 PEP-utilising enzyme, N-terminal JR895_RS21475 PF02896 PEP-utilising enzyme, TIM barrel domain JR895_RS21475 PF00381 PTS HPr component phosphorylation site JR895_RS21480 PF00923 Transaldolase/Fructose-6-phosphate aldolase JR895_RS21485 PF00465 Iron-containing alcohol dehydrogenase JR895_RS21490 PF06940 Domain of unknown function (DUF1287) JR895_RS21495 PF00892 EamA-like transporter family JR895_RS21500 PF00141 Peroxidase JR895_RS21505 PF02219 Methylenetetrahydrofolate reductase JR895_RS21510 PF00742 Homoserine dehydrogenase JR895_RS21510 PF03447 Homoserine dehydrogenase, NAD binding domain JR895_RS21510 PF00696 Amino acid kinase family JR895_RS21515 PF01053 Cys/Met metabolism PLP-dependent enzyme JR895_RS21520 PF01340 Met Apo-repressor, MetJ JR895_RS21525 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family JR895_RS21530 PF01197 Ribosomal protein L31 JR895_RS21535 PF18074 Primosomal protein N C-terminal domain JR895_RS21535 PF17764 3′ DNA-binding domain (3′BD) JR895_RS21535 PF00271 Helicase conserved C-terminal domain JR895_RS21535 PF00270 DEAD/DEAH box helicase JR895_RS21535 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JR895_RS21540 PF00356 Bacterial regulatory proteins, lacI family JR895_RS21545 PF05036 Sporulation related domain JR895_RS21550 PF00227 Proteasome subunit JR895_RS21555 PF00004 ATPase family associated with various cellular activities (AAA) JR895_RS21555 PF07724 AAA domain (Cdc48 subfamily) JR895_RS21555 PF10431 C-terminal, D2-small domain, of ClpB protein JR895_RS21560 PF01040 UbiA prenyltransferase family JR895_RS21565 PF03737 Aldolase/RraA JR895_RS21570 PF06005 Cell division protein ZapB JR895_RS21575 PF00230 Major intrinsic protein JR895_RS21580 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JR895_RS21580 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JR895_RS21585 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JR895_RS21590 PF00175 Oxidoreductase NAD-binding domain JR895_RS21590 PF00970 Oxidoreductase FAD-binding domain JR895_RS21595 PF00582 Universal stress protein family JR895_RS21600 PF04175 Protein of unknown function (DUF406) JR895_RS21605 PF05656 Protein of unknown function (DUF805) JR895_RS21610 PF07305 Protein of unknown function (DUF1454) JR895_RS21615 PF00121 Triosephosphate isomerase JR895_RS21620 PF02611 CDP-diacylglycerol pyrophosphatase JR895_RS21630 PF00365 Phosphofructokinase JR895_RS21635 PF01545 Cation efflux family JR895_RS21635 PF16916 Dimerisation domain of Zinc Transporter JR895_RS21640 PF07813 LTXXQ motif family protein JR895_RS21645 PF00486 Transcriptional regulatory protein, C terminal JR895_RS21645 PF00072 Response regulator receiver domain JR895_RS21650 PF16527 Two-component sensor protein CpxA, periplasmic domain JR895_RS21650 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS21650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS21650 PF00672 HAMP domain JR895_RS21655 PF03473 MOSC domain JR895_RS21655 PF03475 3-alpha domain JR895_RS21660 PF03812 2-keto-3-deoxygluconate permease JR895_RS21665 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JR895_RS21665 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JR895_RS21670 PF06379 L-rhamnose-proton symport protein (RhaT) JR895_RS21675 PF02311 AraC-like ligand binding domain JR895_RS21675 PF12833 Helix-turn-helix domain JR895_RS21680 PF12833 Helix-turn-helix domain JR895_RS21680 PF02311 AraC-like ligand binding domain JR895_RS21685 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JR895_RS21685 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JR895_RS21690 PF06134 L-rhamnose isomerase (RhaA) JR895_RS21695 PF00596 Class II Aldolase and Adducin N-terminal domain JR895_RS21700 PF05336 L-rhamnose mutarotase JR895_RS21710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JR895_RS21715 PF02378 Phosphotransferase system, EIIC JR895_RS21715 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JR895_RS21720 PF05343 M42 glutamyl aminopeptidase JR895_RS21725 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JR895_RS21725 PF08279 HTH domain JR895_RS21730 PF12889 Protein of unknown function (DUF3829) JR895_RS21735 PF02634 FdhD/NarQ family JR895_RS21745 PF09163 Formate dehydrogenase N, transmembrane JR895_RS21745 PF13247 4Fe-4S dicluster domain JR895_RS21750 PF01292 Prokaryotic cytochrome b561 JR895_RS21755 PF04216 Protein involved in formate dehydrogenase formation JR895_RS21765 PF01402 Ribbon-helix-helix protein, copG family JR895_RS21770 PF09500 Putative thioesterase (yiiD_Cterm) JR895_RS21770 PF00583 Acetyltransferase (GNAT) family JR895_RS21775 PF02580 D-Tyr-tRNA(Tyr) deacylase JR895_RS21780 PF03631 Virulence factor BrkB JR895_RS21785 PF13419 Haloacid dehalogenase-like hydrolase JR895_RS21790 PF08220 DeoR-like helix-turn-helix domain JR895_RS21790 PF00455 DeoR C terminal sensor domain JR895_RS21795 PF00294 pfkB family carbohydrate kinase JR895_RS21800 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JR895_RS21800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JR895_RS21805 PF01791 DeoC/LacD family aldolase JR895_RS21815 PF01263 Aldose 1-epimerase JR895_RS21820 PF01055 Glycosyl hydrolases family 31 JR895_RS21835 PF06178 Oligogalacturonate-specific porin protein (KdgM) JR895_RS21840 PF07690 Major Facilitator Superfamily JR895_RS21845 PF01261 Xylose isomerase-like TIM barrel JR895_RS21850 PF00392 Bacterial regulatory proteins, gntR family JR895_RS21850 PF07702 UTRA domain JR895_RS21855 PF03144 Elongation factor Tu domain 2 JR895_RS21855 PF00679 Elongation factor G C-terminus JR895_RS21855 PF00009 Elongation factor Tu GTP binding domain JR895_RS21860 PF00120 Glutamine synthetase, catalytic domain JR895_RS21860 PF03951 Glutamine synthetase, beta-Grasp domain JR895_RS21865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS21865 PF00989 PAS fold JR895_RS21865 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS21870 PF00072 Response regulator receiver domain JR895_RS21870 PF02954 Bacterial regulatory protein, Fis family JR895_RS21870 PF00158 Sigma-54 interaction domain JR895_RS21880 PF04055 Radical SAM superfamily JR895_RS21880 PF06969 HemN C-terminal domain JR895_RS21885 PF04220 Der GTPase activator (YihI) JR895_RS21890 PF01926 50S ribosome-binding GTPase JR895_RS21895 PF01612 3'-5' exonuclease JR895_RS21895 PF00476 DNA polymerase family A JR895_RS21895 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JR895_RS21895 PF01367 5'-3' exonuclease, C-terminal SAM fold JR895_RS21900 PF01553 Acyltransferase JR895_RS21905 PF06097 Bacterial protein of unknown function (DUF945) JR895_RS21910 PF01323 DSBA-like thioredoxin domain JR895_RS21915 PF01636 Phosphotransferase enzyme family JR895_RS21920 PF06288 Protein of unknown function (DUF1040) JR895_RS21925 PF12804 MobA-like NTP transferase domain JR895_RS21930 PF03205 Molybdopterin guanine dinucleotide synthesis protein B JR895_RS21960 PF12724 Flavodoxin domain JR895_RS21965 PF02386 Cation transport protein JR895_RS21970 PF01205 Uncharacterized protein family UPF0029 JR895_RS21970 PF09186 Domain of unknown function (DUF1949) JR895_RS21975 PF00557 Metallopeptidase family M24 JR895_RS21980 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JR895_RS21980 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JR895_RS21980 PF00378 Enoyl-CoA hydratase/isomerase JR895_RS21985 PF02803 Thiolase, C-terminal domain JR895_RS21985 PF00108 Thiolase, N-terminal domain JR895_RS21990 PF00175 Oxidoreductase NAD-binding domain JR895_RS21990 PF00970 Oxidoreductase FAD-binding domain JR895_RS21995 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JR895_RS22000 PF02357 Transcription termination factor nusG JR895_RS22005 PF01026 TatD related DNase JR895_RS22010 PF00902 Sec-independent protein translocase protein (TatC) JR895_RS22020 PF02416 mttA/Hcf106 family JR895_RS22025 PF03109 ABC1 family JR895_RS22030 PF02036 SCP-2 sterol transfer family JR895_RS22035 PF01209 ubiE/COQ5 methyltransferase family JR895_RS22040 PF02646 RmuC family JR895_RS22045 PF01614 Bacterial transcriptional regulator JR895_RS22045 PF09339 IclR helix-turn-helix domain JR895_RS22050 PF05035 2-keto-3-deoxy-galactonokinase JR895_RS22055 PF01081 KDPG and KHG aldolase JR895_RS22060 PF03401 Tripartite tricarboxylate transporter family receptor JR895_RS22075 PF00535 Glycosyl transferase family 2 JR895_RS22100 PF01943 Polysaccharide biosynthesis protein JR895_RS22110 PF01467 Cytidylyltransferase-like JR895_RS22115 PF02397 Bacterial sugar transferase JR895_RS22130 PF01048 Phosphorylase superfamily JR895_RS22135 PF01738 Dienelactone hydrolase family JR895_RS22140 PF00857 Isochorismatase family JR895_RS22150 PF02629 CoA binding domain JR895_RS22150 PF00549 CoA-ligase JR895_RS22155 PF06545 Protein of unknown function (DUF1116) JR895_RS22160 PF00696 Amino acid kinase family JR895_RS22170 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JR895_RS22175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS22175 PF03466 LysR substrate binding domain JR895_RS22180 PF01717 Cobalamin-independent synthase, Catalytic domain JR895_RS22180 PF08267 Cobalamin-independent synthase, N-terminal domain JR895_RS22185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS22185 PF03466 LysR substrate binding domain JR895_RS22190 PF00892 EamA-like transporter family JR895_RS22200 PF12146 Serine aminopeptidase, S33 JR895_RS22205 PF01810 LysE type translocator JR895_RS22210 PF01810 LysE type translocator JR895_RS22215 PF00271 Helicase conserved C-terminal domain JR895_RS22215 PF09382 RQC domain JR895_RS22215 PF00270 DEAD/DEAH box helicase JR895_RS22215 PF00570 HRDC domain JR895_RS22215 PF16124 RecQ zinc-binding JR895_RS22220 PF02253 Phospholipase A1 JR895_RS22225 PF03061 Thioesterase superfamily JR895_RS22230 PF00892 EamA-like transporter family JR895_RS22240 PF10947 Protein of unknown function (DUF2628) JR895_RS22245 PF13936 Helix-turn-helix domain JR895_RS22245 PF00665 Integrase core domain JR895_RS22255 PF01544 CorA-like Mg2+ transporter protein JR895_RS22260 PF09992 Phosphodiester glycosidase JR895_RS22265 PF00580 UvrD/REP helicase N-terminal domain JR895_RS22265 PF13361 UvrD-like helicase C-terminal domain JR895_RS22270 PF13419 Haloacid dehalogenase-like hydrolase JR895_RS22275 PF00589 Phage integrase family JR895_RS22275 PF02899 Phage integrase, N-terminal SAM-like domain JR895_RS22280 PF04340 Protein of unknown function, DUF484 JR895_RS22285 PF01678 Diaminopimelate epimerase JR895_RS22290 PF13627 Prokaryotic lipoprotein-attachment site JR895_RS22295 PF01491 Frataxin-like domain JR895_RS22300 PF12633 Adenylate cyclase NT domain JR895_RS22300 PF01295 Adenylate cyclase, class-I JR895_RS22305 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JR895_RS22305 PF03900 Porphobilinogen deaminase, C-terminal domain JR895_RS22310 PF02602 Uroporphyrinogen-III synthase HemD JR895_RS22315 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase JR895_RS22320 PF07719 Tetratricopeptide repeat JR895_RS22320 PF07219 HemY protein N-terminus JR895_RS22325 PF00884 Sulfatase JR895_RS22330 PF04055 Radical SAM superfamily JR895_RS22330 PF13186 Iron-sulfur cluster-binding domain JR895_RS22355 PF00324 Amino acid permease JR895_RS22360 PF03808 Glycosyl transferase WecB/TagA/CpsF family JR895_RS22365 PF06899 WzyE protein, O-antigen assembly polymerase JR895_RS22370 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 JR895_RS22375 PF01943 Polysaccharide biosynthesis protein JR895_RS22380 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JR895_RS22390 PF00483 Nucleotidyl transferase JR895_RS22395 PF16363 GDP-mannose 4,6 dehydratase JR895_RS22400 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JR895_RS22400 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JR895_RS22400 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JR895_RS22405 PF02350 UDP-N-acetylglucosamine 2-epimerase JR895_RS22410 PF02706 Chain length determinant protein JR895_RS22415 PF00953 Glycosyl transferase family 4 JR895_RS22420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JR895_RS22420 PF07498 Rho termination factor, N-terminal domain JR895_RS22420 PF07497 Rho termination factor, RNA-binding domain JR895_RS22430 PF00085 Thioredoxin JR895_RS22435 PF00270 DEAD/DEAH box helicase JR895_RS22435 PF00271 Helicase conserved C-terminal domain JR895_RS22440 PF02541 Ppx/GppA phosphatase family JR895_RS22445 PF13361 UvrD-like helicase C-terminal domain JR895_RS22445 PF00580 UvrD/REP helicase N-terminal domain JR895_RS22450 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JR895_RS22460 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JR895_RS22460 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JR895_RS22465 PF03466 LysR substrate binding domain JR895_RS22465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS22470 PF00291 Pyridoxal-phosphate dependent enzyme JR895_RS22470 PF00585 C-terminal regulatory domain of Threonine dehydratase JR895_RS22475 PF00920 Dehydratase family JR895_RS22480 PF01063 Amino-transferase class IV JR895_RS22490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JR895_RS22490 PF00205 Thiamine pyrophosphate enzyme, central domain JR895_RS22490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JR895_RS22500 PF08046 IlvGEDA operon leader peptide JR895_RS22505 PF13335 Magnesium chelatase, subunit ChlI C-terminal JR895_RS22505 PF01078 Magnesium chelatase, subunit ChlI JR895_RS22510 PF04219 Protein of unknown function, DUF JR895_RS22515 PF03466 LysR substrate binding domain JR895_RS22515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS22550 PF07729 FCD domain JR895_RS22550 PF00392 Bacterial regulatory proteins, gntR family JR895_RS22555 PF07690 Major Facilitator Superfamily JR895_RS22560 PF00356 Bacterial regulatory proteins, lacI family JR895_RS22565 PF00294 pfkB family carbohydrate kinase JR895_RS22570 PF13407 Periplasmic binding protein domain JR895_RS22575 PF02653 Branched-chain amino acid transport system / permease component JR895_RS22580 PF00005 ABC transporter JR895_RS22585 PF05025 RbsD / FucU transport protein family JR895_RS22590 PF02705 K+ potassium transporter JR895_RS22595 PF12592 Protein of unknown function (DUF3763) JR895_RS22595 PF07728 AAA domain (dynein-related subfamily) JR895_RS22595 PF17868 AAA lid domain JR895_RS22600 PF05762 VWA domain containing CoxE-like protein JR895_RS22605 PF03590 Aspartate-ammonia ligase JR895_RS22610 PF01037 Lrp/AsnC ligand binding domain JR895_RS22615 PF00258 Flavodoxin JR895_RS22620 PF01134 Glucose inhibited division protein A JR895_RS22620 PF13932 GidA associated domain JR895_RS22625 PF02527 rRNA small subunit methyltransferase G JR895_RS22630 PF03899 ATP synthase I chain JR895_RS22635 PF00119 ATP synthase A chain JR895_RS22640 PF00137 ATP synthase subunit C JR895_RS22645 PF00430 ATP synthase B/B' CF(0) JR895_RS22650 PF00213 ATP synthase delta (OSCP) subunit JR895_RS22655 PF02874 ATP synthase alpha/beta family, beta-barrel domain JR895_RS22655 PF00306 ATP synthase alpha/beta chain, C terminal domain JR895_RS22655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JR895_RS22660 PF00231 ATP synthase JR895_RS22665 PF02874 ATP synthase alpha/beta family, beta-barrel domain JR895_RS22665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JR895_RS22670 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JR895_RS22670 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JR895_RS22675 PF00132 Bacterial transferase hexapeptide (six repeats) JR895_RS22675 PF12804 MobA-like NTP transferase domain JR895_RS22675 PF14602 Hexapeptide repeat of succinyl-transferase JR895_RS22680 PF01380 SIS domain JR895_RS22685 PF12849 PBP superfamily domain JR895_RS22690 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS22695 PF00528 Binding-protein-dependent transport system inner membrane component JR895_RS22700 PF00005 ABC transporter JR895_RS22705 PF01895 PhoU domain JR895_RS22710 PF00874 PRD domain JR895_RS22710 PF03123 CAT RNA binding domain JR895_RS22715 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JR895_RS22715 PF02378 Phosphotransferase system, EIIC JR895_RS22715 PF00367 phosphotransferase system, EIIB JR895_RS22720 PF00232 Glycosyl hydrolase family 1 JR895_RS22725 PF11471 Maltoporin periplasmic N-terminal extension JR895_RS22725 PF02264 LamB porin JR895_RS22730 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JR895_RS22730 PF00756 Putative esterase JR895_RS22735 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JR895_RS22740 PF03691 Uncharacterised protein family (UPF0167) JR895_RS22750 PF13419 Haloacid dehalogenase-like hydrolase JR895_RS22755 PF00860 Permease family JR895_RS22760 PF03358 NADPH-dependent FMN reductase JR895_RS22770 PF03466 LysR substrate binding domain JR895_RS22770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS22775 PF07690 Major Facilitator Superfamily JR895_RS22780 PF03222 Tryptophan/tyrosine permease family JR895_RS22785 PF01212 Beta-eliminating lyase JR895_RS22790 PF08053 Tryptophanase operon leader peptide JR895_RS22795 PF01926 50S ribosome-binding GTPase JR895_RS22795 PF12631 MnmE helical domain JR895_RS22795 PF10396 GTP-binding protein TrmE N-terminus JR895_RS22800 PF14849 YidC periplasmic domain JR895_RS22800 PF02096 60Kd inner membrane protein JR895_RS22805 PF01809 Putative membrane protein insertion efficiency factor JR895_RS22810 PF00825 Ribonuclease P JR895_RS22815 PF00468 Ribosomal protein L34 JR895_RS22850 PF06406 StbA protein JR895_RS22890 PF06834 TraU protein JR895_RS22900 PF01797 Transposase IS200 like JR895_RS22910 PF00580 UvrD/REP helicase N-terminal domain JR895_RS22910 PF13361 UvrD-like helicase C-terminal domain JR895_RS23040 PF05321 Haemolysin expression modulating protein JR895_RS23050 PF01051 Initiator Replication protein JR895_RS23065 PF00582 Universal stress protein family JR895_RS23070 PF00916 Sulfate permease family JR895_RS23070 PF01740 STAS domain JR895_RS23095 PF13610 DDE domain JR895_RS23110 PF13599 Pentapeptide repeats (9 copies) JR895_RS23125 PF13610 DDE domain JR895_RS23140 PF07690 Major Facilitator Superfamily JR895_RS23145 PF03466 LysR substrate binding domain JR895_RS23145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR895_RS23155 PF13610 DDE domain JR895_RS23190 PF03389 MobA/MobL family JR895_RS23195 PF13610 DDE domain JR895_RS23205 PF00106 short chain dehydrogenase JR895_RS23215 PF00809 Pterin binding enzyme JR895_RS23230 PF00893 Small Multidrug Resistance protein JR895_RS23235 PF01909 Nucleotidyltransferase domain JR895_RS23235 PF13427 Domain of unknown function (DUF4111) JR895_RS23240 PF00561 alpha/beta hydrolase fold JR895_RS23245 PF13610 DDE domain JR895_RS23250 PF13700 Domain of unknown function (DUF4158) JR895_RS23250 PF01526 Tn3 transposase DDE domain JR895_RS23255 PF00239 Resolvase, N terminal domain JR895_RS23255 PF02796 Helix-turn-helix domain of resolvase JR895_RS23265 PF13610 DDE domain JR895_RS23275 PF00512 His Kinase A (phospho-acceptor) domain JR895_RS23275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR895_RS23275 PF00672 HAMP domain JR895_RS23280 PF00072 Response regulator receiver domain JR895_RS23280 PF00486 Transcriptional regulatory protein, C terminal JR895_RS23285 PF02321 Outer membrane efflux protein JR895_RS23290 PF11604 Copper binding periplasmic protein CusF JR895_RS23295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JR895_RS23300 PF00873 AcrB/AcrD/AcrF family JR895_RS23310 PF04945 YHS domain JR895_RS23325 PF13737 Transposase DDE domain JR895_RS23335 PF02796 Helix-turn-helix domain of resolvase JR895_RS23335 PF00239 Resolvase, N terminal domain JR895_RS23340 PF13700 Domain of unknown function (DUF4158) JR895_RS23340 PF01526 Tn3 transposase DDE domain JR895_RS23345 PF12729 Four helix bundle sensory module for signal transduction JR895_RS23345 PF00672 HAMP domain JR895_RS23345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JR895_RS23380 PF18284 DNA methylase N-terminal domain JR895_RS23380 PF00145 C-5 cytosine-specific DNA methylase JR895_RS23385 PF00565 Staphylococcal nuclease homologue JR895_RS23475 PF00665 Integrase core domain JR895_RS23475 PF13936 Helix-turn-helix domain JR895_RS23535 PF01051 Initiator Replication protein JR895_RS23565 PF02086 D12 class N6 adenine-specific DNA methyltransferase JR895_RS23590 PF01051 Initiator Replication protein JR895_RS23635 PF13932 GidA associated domain JR895_RS23635 PF01134 Glucose inhibited division protein A JR895_RS23645 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer JR895_RS23670 PF13614 AAA domain JR895_RS23670 PF00376 MerR family regulatory protein JR895_RS23680 PF01076 Plasmid recombination enzyme