CES94_RS00005	SM00382	ATPases associated with a variety of cellular activities
CES94_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CES94_RS00010	SM00480	DNA polymerase III beta subunit
CES94_RS00020	SM00387	Histidine kinase-like ATPases
CES94_RS00020	SM00433	TopoisomeraseII
CES94_RS00040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CES94_RS00040	SM00895	CES94_RS00040
CES94_RS00055	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CES94_RS00110	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS00185	SM00421	helix_turn_helix, Lux Regulon
CES94_RS00185	SM00448	cheY-homologous receiver domain
CES94_RS00190	SM00387	Histidine kinase-like ATPases
CES94_RS00305	SM00487	DEAD-like helicases superfamily
CES94_RS00305	SM00490	helicase superfamily c-terminal domain
CES94_RS00315	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CES94_RS00315	SM00954	Region found in RelA / SpoT proteins
CES94_RS00320	SM01409	CES94_RS00320
CES94_RS00325	SM00072	Guanylate kinase homologues.
CES94_RS00330	SM00532	Ligase N family
CES94_RS00395	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CES94_RS00395	SM01232	CES94_RS00395
CES94_RS00475	SM00829	Enoylreductase
CES94_RS00505	SM00450	Rhodanese Homology Domain
CES94_RS00525	SM00971	Serine acetyltransferase, N-terminal
CES94_RS00540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CES94_RS00540	SM00895	CES94_RS00540
CES94_RS00715	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS00720	SM01007	Class II Aldolase and Adducin N-terminal domain
CES94_RS00730	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CES94_RS00765	SM00346	helix_turn_helix isocitrate lyase regulation
CES94_RS00780	SM00642	Alpha-amylase domain
CES94_RS00785	SM00047	Lysozyme subfamily 2
CES94_RS00790	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS00800	SM00382	ATPases associated with a variety of cellular activities
CES94_RS00860	SM00357	Cold shock protein domain
CES94_RS00865	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS00950	SM00382	ATPases associated with a variety of cellular activities
CES94_RS00955	SM00382	ATPases associated with a variety of cellular activities
CES94_RS01070	SM00028	Tetratricopeptide repeats
CES94_RS01075	SM00052	Putative diguanylate phosphodiesterase
CES94_RS01075	SM00267	diguanylate cyclase
CES94_RS01110	SM00052	Putative diguanylate phosphodiesterase
CES94_RS01135	SM00421	helix_turn_helix, Lux Regulon
CES94_RS01145	SM01235	CES94_RS01145
CES94_RS01155	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS01160	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS01210	SM00421	helix_turn_helix, Lux Regulon
CES94_RS01240	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CES94_RS01315	SM00382	ATPases associated with a variety of cellular activities
CES94_RS01330	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS01370	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS01370	SM00387	Histidine kinase-like ATPases
CES94_RS01370	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS01375	SM00448	cheY-homologous receiver domain
CES94_RS01375	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS01405	SM00746	metallochaperone-like domain
CES94_RS01460	SM00448	cheY-homologous receiver domain
CES94_RS01460	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS01465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS01465	SM00387	Histidine kinase-like ATPases
CES94_RS01465	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS01520	SM00382	ATPases associated with a variety of cellular activities
CES94_RS01545	SM00382	ATPases associated with a variety of cellular activities
CES94_RS01550	SM00382	ATPases associated with a variety of cellular activities
CES94_RS01625	SM00382	ATPases associated with a variety of cellular activities
CES94_RS01625	SM00962	SRP54-type protein, GTPase domain
CES94_RS01625	SM00963	SRP54-type protein, helical bundle domain
CES94_RS01630	SM00382	ATPases associated with a variety of cellular activities
CES94_RS01675	SM00382	ATPases associated with a variety of cellular activities
CES94_RS01680	SM00382	ATPases associated with a variety of cellular activities
CES94_RS01760	SM00354	helix_turn _helix lactose operon repressor
CES94_RS01780	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CES94_RS01785	SM00642	Alpha-amylase domain
CES94_RS01790	SM00642	Alpha-amylase domain
CES94_RS01840	SM00450	Rhodanese Homology Domain
CES94_RS01850	SM00420	helix_turn_helix, Deoxyribose operon repressor
CES94_RS01850	SM01134	CES94_RS01850
CES94_RS01855	SM00382	ATPases associated with a variety of cellular activities
CES94_RS01870	SM00421	helix_turn_helix, Lux Regulon
CES94_RS01925	SM00899	CES94_RS01925
CES94_RS01935	SM00316	Ribosomal protein S1-like RNA-binding domain
CES94_RS01935	SM00732	Likely ribonuclease with RNase H fold.
CES94_RS01950	SM00448	cheY-homologous receiver domain
CES94_RS01950	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS01955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS01955	SM00387	Histidine kinase-like ATPases
CES94_RS01955	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS01990	SM00363	S4 RNA-binding domain
CES94_RS02035	SM00965	Secretin and TonB N terminus short domain
CES94_RS02120	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CES94_RS02120	SM00866	CES94_RS02120
CES94_RS02210	SM00100	Cyclic nucleotide-monophosphate binding domain
CES94_RS02210	SM00419	helix_turn_helix, cAMP Regulatory protein
CES94_RS02240	SM00382	ATPases associated with a variety of cellular activities
CES94_RS02310	SM00838	Elongation factor G C-terminus
CES94_RS02310	SM00889	Elongation factor G, domain IV
CES94_RS02325	SM00495	Chitin-binding domain type 3
CES94_RS02385	SM00382	ATPases associated with a variety of cellular activities
CES94_RS02415	SM01403	CES94_RS02415
CES94_RS02435	SM01382	CES94_RS02435
CES94_RS02435	SM01383	CES94_RS02435
CES94_RS02450	SM00322	K homology RNA-binding domain
CES94_RS02470	SM01374	CES94_RS02470
CES94_RS02475	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CES94_RS02540	SM00363	S4 RNA-binding domain
CES94_RS02540	SM01390	CES94_RS02540
CES94_RS02545	SM00662	RNA polymerases D
CES94_RS02560	SM00422	helix_turn_helix, mercury resistance
CES94_RS02665	SM00382	ATPases associated with a variety of cellular activities
CES94_RS02680	SM00062	Bacterial periplasmic substrate-binding proteins
CES94_RS02750	SM00878	Biotin carboxylase C-terminal domain
CES94_RS02765	SM00829	Enoylreductase
CES94_RS02770	SM00052	Putative diguanylate phosphodiesterase
CES94_RS02770	SM00267	diguanylate cyclase
CES94_RS02805	SM00316	Ribosomal protein S1-like RNA-binding domain
CES94_RS02860	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CES94_RS02865	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CES94_RS02925	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CES94_RS02925	SM00895	CES94_RS02925
CES94_RS02930	SM01130	CES94_RS02930
CES94_RS02985	SM00729	Elongator protein 3, MiaB family, Radical SAM
CES94_RS02990	SM00073	Histidine Phosphotransfer domain
CES94_RS02990	SM00091	PAS domain
CES94_RS02990	SM00387	Histidine kinase-like ATPases
CES94_RS02990	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS02990	SM00448	cheY-homologous receiver domain
CES94_RS03035	SM00382	ATPases associated with a variety of cellular activities
CES94_RS03065	SM00382	ATPases associated with a variety of cellular activities
CES94_RS03140	SM01103	CES94_RS03140
CES94_RS03150	SM00382	ATPases associated with a variety of cellular activities
CES94_RS03210	SM00316	Ribosomal protein S1-like RNA-binding domain
CES94_RS03230	SM01387	CES94_RS03230
CES94_RS03235	SM00316	Ribosomal protein S1-like RNA-binding domain
CES94_RS03235	SM00322	K homology RNA-binding domain
CES94_RS03240	SM00028	Tetratricopeptide repeats
CES94_RS03250	SM00487	DEAD-like helicases superfamily
CES94_RS03250	SM00490	helicase superfamily c-terminal domain
CES94_RS03285	SM00465	GIY-YIG type nucleases (URI domain)
CES94_RS03300	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CES94_RS03310	SM00749	bacterial OsmY and nodulation domain
CES94_RS03420	SM00420	helix_turn_helix, Deoxyribose operon repressor
CES94_RS03420	SM01134	CES94_RS03420
CES94_RS03435	SM00858	CES94_RS03435
CES94_RS03600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CES94_RS03600	SM00895	CES94_RS03600
CES94_RS03625	SM00858	CES94_RS03625
CES94_RS03680	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS03710	SM01038	Beta galactosidase small chain
CES94_RS03715	SM00354	helix_turn _helix lactose operon repressor
CES94_RS03740	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CES94_RS03740	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CES94_RS03780	SM00400	zinc finger
CES94_RS03780	SM00493	CES94_RS03780
CES94_RS03780	SM00766	DNA primase DnaG DnaB-binding
CES94_RS03825	SM01207	CES94_RS03825
CES94_RS03830	SM00905	Dihydroneopterin aldolase
CES94_RS03845	SM00287	Bacterial SH3 domain homologues
CES94_RS03855	SM01118	CES94_RS03855
CES94_RS03870	SM00244	prohibitin homologues
CES94_RS03980	SM00387	Histidine kinase-like ATPases
CES94_RS03980	SM00433	TopoisomeraseII
CES94_RS04010	SM00387	Histidine kinase-like ATPases
CES94_RS04010	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS04015	SM00448	cheY-homologous receiver domain
CES94_RS04015	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS04025	SM00871	Bacterial transcription activator, effector binding domain
CES94_RS04035	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS04045	SM00434	DNA Topoisomerase IV
CES94_RS04050	SM00563	Phosphate acyltransferases
CES94_RS04125	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CES94_RS04165	SM00849	Metallo-beta-lactamase superfamily
CES94_RS04175	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS04220	SM01038	Beta galactosidase small chain
CES94_RS04225	SM00354	helix_turn _helix lactose operon repressor
CES94_RS04275	SM00965	Secretin and TonB N terminus short domain
CES94_RS04295	SM00382	ATPases associated with a variety of cellular activities
CES94_RS04325	SM00829	Enoylreductase
CES94_RS04370	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS04630	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CES94_RS04630	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS04755	SM00478	endonuclease III
CES94_RS04755	SM00525	CES94_RS04755
CES94_RS04780	SM00870	CES94_RS04780
CES94_RS04790	SM00729	Elongator protein 3, MiaB family, Radical SAM
CES94_RS04800	SM01152	CES94_RS04800
CES94_RS04815	SM00382	ATPases associated with a variety of cellular activities
CES94_RS04820	SM00732	Likely ribonuclease with RNase H fold.
CES94_RS04845	SM00731	SprT homologues.
CES94_RS04895	SM00861	Transketolase, pyrimidine binding domain
CES94_RS04935	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CES94_RS05045	SM01011	Aminopeptidase P, N-terminal domain
CES94_RS05085	SM01022	CES94_RS05085
CES94_RS05185	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CES94_RS05190	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CES94_RS05245	SM00091	PAS domain
CES94_RS05260	SM00382	ATPases associated with a variety of cellular activities
CES94_RS05270	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CES94_RS05275	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CES94_RS05285	SM00257	Lysin motif
CES94_RS05325	SM00857	Resolvase, N terminal domain
CES94_RS05340	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS05440	SM00421	helix_turn_helix, Lux Regulon
CES94_RS05460	SM00028	Tetratricopeptide repeats
CES94_RS05460	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS05495	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS05545	SM00354	helix_turn _helix lactose operon repressor
CES94_RS05550	SM00563	Phosphate acyltransferases
CES94_RS05575	SM00927	DNA mismatch repair enzyme MutH
CES94_RS05585	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CES94_RS05635	SM00382	ATPases associated with a variety of cellular activities
CES94_RS05645	SM00646	CES94_RS05645
CES94_RS05665	SM00925	MltA specific insert domain
CES94_RS05705	SM00420	helix_turn_helix, Deoxyribose operon repressor
CES94_RS05705	SM01134	CES94_RS05705
CES94_RS05730	SM01007	Class II Aldolase and Adducin N-terminal domain
CES94_RS05740	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CES94_RS05740	SM00475	5'-3' exonuclease
CES94_RS05790	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CES94_RS05795	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CES94_RS05800	SM00073	Histidine Phosphotransfer domain
CES94_RS05800	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS05800	SM00387	Histidine kinase-like ATPases
CES94_RS05800	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS05800	SM00448	cheY-homologous receiver domain
CES94_RS05810	SM00954	Region found in RelA / SpoT proteins
CES94_RS05815	SM00966	SpoVT / AbrB like domain 
CES94_RS05835	SM01192	CES94_RS05835
CES94_RS05835	SM01193	CES94_RS05835
CES94_RS05890	SM00893	Electron transfer flavoprotein domain
CES94_RS05950	SM00487	DEAD-like helicases superfamily
CES94_RS06045	SM00257	Lysin motif
CES94_RS06065	SM01007	Class II Aldolase and Adducin N-terminal domain
CES94_RS06080	SM00420	helix_turn_helix, Deoxyribose operon repressor
CES94_RS06080	SM01134	CES94_RS06080
CES94_RS06090	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CES94_RS06090	SM00534	ATPase domain of DNA mismatch repair MUTS family
CES94_RS06100	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CES94_RS06100	SM00382	ATPases associated with a variety of cellular activities
CES94_RS06190	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS06205	SM00354	helix_turn _helix lactose operon repressor
CES94_RS06225	SM00849	Metallo-beta-lactamase superfamily
CES94_RS06230	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CES94_RS06230	SM00382	ATPases associated with a variety of cellular activities
CES94_RS06240	SM00420	helix_turn_helix, Deoxyribose operon repressor
CES94_RS06240	SM01134	CES94_RS06240
CES94_RS06280	SM00382	ATPases associated with a variety of cellular activities
CES94_RS06290	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CES94_RS06355	SM00347	helix_turn_helix multiple antibiotic resistance protein
CES94_RS06385	SM00382	ATPases associated with a variety of cellular activities
CES94_RS06425	SM00528	Domain in histone-like proteins of HNS family
CES94_RS06430	SM00450	Rhodanese Homology Domain
CES94_RS06435	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CES94_RS06445	SM00257	Lysin motif
CES94_RS06445	SM00749	bacterial OsmY and nodulation domain
CES94_RS06450	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CES94_RS06450	SM00895	CES94_RS06450
CES94_RS06565	SM01091	Transporter associated domain
CES94_RS06575	SM00382	ATPases associated with a variety of cellular activities
CES94_RS06575	SM00962	SRP54-type protein, GTPase domain
CES94_RS06575	SM00963	SRP54-type protein, helical bundle domain
CES94_RS06605	SM00267	diguanylate cyclase
CES94_RS06625	SM00830	Chorismate mutase type II
CES94_RS06630	SM00830	Chorismate mutase type II
CES94_RS06650	SM00363	S4 RNA-binding domain
CES94_RS06660	SM00382	ATPases associated with a variety of cellular activities
CES94_RS06660	SM01086	C-terminal, D2-small domain, of ClpB protein
CES94_RS06700	SM00155	Phospholipase D. Active site motifs.
CES94_RS06705	SM00881	CoA binding domain
CES94_RS06710	SM01144	CES94_RS06710
CES94_RS06725	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CES94_RS06730	SM00986	Uracil DNA glycosylase superfamily
CES94_RS06730	SM00987	UreE urease accessory protein, C-terminal domain 
CES94_RS06750	SM00487	DEAD-like helicases superfamily
CES94_RS06750	SM00490	helicase superfamily c-terminal domain
CES94_RS06800	SM00358	Double-stranded RNA binding motif
CES94_RS06800	SM00535	Ribonuclease III family
CES94_RS06860	SM00062	Bacterial periplasmic substrate-binding proteins
CES94_RS06870	SM01211	CES94_RS06870
CES94_RS06875	SM00387	Histidine kinase-like ATPases
CES94_RS06875	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS06885	SM00382	ATPases associated with a variety of cellular activities
CES94_RS06885	SM00448	cheY-homologous receiver domain
CES94_RS06890	SM00938	Nitrogen regulatory protein P-II
CES94_RS06910	SM00028	Tetratricopeptide repeats
CES94_RS06920	SM00382	ATPases associated with a variety of cellular activities
CES94_RS06925	SM00829	Enoylreductase
CES94_RS07015	SM00271	DnaJ molecular chaperone homology domain
CES94_RS07045	SM00450	Rhodanese Homology Domain
CES94_RS07050	SM01359	CES94_RS07050
CES94_RS07050	SM01360	CES94_RS07050
CES94_RS07060	SM00562	CES94_RS07060
CES94_RS07070	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS07090	SM00564	beta-propeller repeat
CES94_RS07110	SM00116	Domain in cystathionine beta-synthase and other proteins.
CES94_RS07110	SM01240	CES94_RS07110
CES94_RS07190	SM00052	Putative diguanylate phosphodiesterase
CES94_RS07190	SM00267	diguanylate cyclase
CES94_RS07255	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CES94_RS07255	SM00382	ATPases associated with a variety of cellular activities
CES94_RS07320	SM01130	CES94_RS07320
CES94_RS07390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS07390	SM00387	Histidine kinase-like ATPases
CES94_RS07410	SM00861	Transketolase, pyrimidine binding domain
CES94_RS07425	SM00919	Malic enzyme, NAD binding domain
CES94_RS07425	SM01274	CES94_RS07425
CES94_RS07430	SM00877	CES94_RS07430
CES94_RS07455	SM00877	CES94_RS07455
CES94_RS07500	SM00877	CES94_RS07500
CES94_RS07505	SM00877	CES94_RS07505
CES94_RS07510	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS07520	SM00646	CES94_RS07520
CES94_RS07560	SM00822	CES94_RS07560
CES94_RS07585	SM00382	ATPases associated with a variety of cellular activities
CES94_RS07630	SM00771	ZipA, C-terminal domain (FtsZ-binding)
CES94_RS07635	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CES94_RS07635	SM00292	breast cancer carboxy-terminal domain
CES94_RS07635	SM00532	Ligase N family
CES94_RS07725	SM00052	Putative diguanylate phosphodiesterase
CES94_RS07750	SM00923	MbtH-like protein
CES94_RS07755	SM00823	Phosphopantetheine attachment site
CES94_RS07755	SM00824	Thioesterase
CES94_RS07765	SM00382	ATPases associated with a variety of cellular activities
CES94_RS07805	SM00822	CES94_RS07805
CES94_RS07835	SM00470	ParB-like nuclease domain
CES94_RS07930	SM00764	Citrate lyase ligase C-terminal domain
CES94_RS07935	SM00091	PAS domain
CES94_RS07935	SM00387	Histidine kinase-like ATPases
CES94_RS07940	SM00448	cheY-homologous receiver domain
CES94_RS07960	SM00357	Cold shock protein domain
CES94_RS07980	SM00729	Elongator protein 3, MiaB family, Radical SAM
CES94_RS08010	SM00936	Penicillin-binding protein 5, C-terminal domain 
CES94_RS08040	SM00855	Phosphoglycerate mutase family
CES94_RS08070	SM00671	Sel1-like repeats.
CES94_RS08080	SM00271	DnaJ molecular chaperone homology domain
CES94_RS08085	SM00671	Sel1-like repeats.
CES94_RS08125	SM00382	ATPases associated with a variety of cellular activities
CES94_RS08140	SM00062	Bacterial periplasmic substrate-binding proteins
CES94_RS08155	SM00116	Domain in cystathionine beta-synthase and other proteins.
CES94_RS08155	SM01091	Transporter associated domain
CES94_RS08170	SM00729	Elongator protein 3, MiaB family, Radical SAM
CES94_RS08335	SM00448	cheY-homologous receiver domain
CES94_RS08335	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS08340	SM00387	Histidine kinase-like ATPases
CES94_RS08340	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS08415	SM00796	Allophanate hydrolase subunit 1
CES94_RS08420	SM00797	Allophanate hydrolase subunit 2
CES94_RS08430	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CES94_RS08430	SM01232	CES94_RS08430
CES94_RS08495	SM00861	Transketolase, pyrimidine binding domain
CES94_RS08510	SM00881	CoA binding domain
CES94_RS08515	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CES94_RS08515	SM00866	CES94_RS08515
CES94_RS08525	SM00872	Alpha mannosidase, middle domain
CES94_RS08655	SM00855	Phosphoglycerate mutase family
CES94_RS08680	SM00382	ATPases associated with a variety of cellular activities
CES94_RS08710	SM00382	ATPases associated with a variety of cellular activities
CES94_RS08765	SM00729	Elongator protein 3, MiaB family, Radical SAM
CES94_RS08765	SM00876	Biotin and Thiamin Synthesis associated domain
CES94_RS08785	SM00487	DEAD-like helicases superfamily
CES94_RS08785	SM00490	helicase superfamily c-terminal domain
CES94_RS08795	SM00729	Elongator protein 3, MiaB family, Radical SAM
CES94_RS08800	SM00852	Probable molybdopterin binding domain
CES94_RS08845	SM00155	Phospholipase D. Active site motifs.
CES94_RS08870	SM00382	ATPases associated with a variety of cellular activities
CES94_RS08885	SM00487	DEAD-like helicases superfamily
CES94_RS08885	SM00490	helicase superfamily c-terminal domain
CES94_RS08900	SM00487	DEAD-like helicases superfamily
CES94_RS08900	SM00488	CES94_RS08900
CES94_RS08900	SM00491	CES94_RS08900
CES94_RS08925	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CES94_RS08950	SM00382	ATPases associated with a variety of cellular activities
CES94_RS08970	SM00062	Bacterial periplasmic substrate-binding proteins
CES94_RS08970	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CES94_RS09015	SM00529	Helix-turn-helix diphteria tox regulatory element
CES94_RS09030	SM00382	ATPases associated with a variety of cellular activities
CES94_RS09065	SM00852	Probable molybdopterin binding domain
CES94_RS09075	SM00382	ATPases associated with a variety of cellular activities
CES94_RS09095	SM00052	Putative diguanylate phosphodiesterase
CES94_RS09100	SM00267	diguanylate cyclase
CES94_RS09105	SM00729	Elongator protein 3, MiaB family, Radical SAM
CES94_RS09125	SM00936	Penicillin-binding protein 5, C-terminal domain 
CES94_RS09130	SM00420	helix_turn_helix, Deoxyribose operon repressor
CES94_RS09130	SM01134	CES94_RS09130
CES94_RS09135	SM00014	Acid phosphatase homologues
CES94_RS09210	SM00382	ATPases associated with a variety of cellular activities
CES94_RS09235	SM00062	Bacterial periplasmic substrate-binding proteins
CES94_RS09235	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CES94_RS09250	SM00062	Bacterial periplasmic substrate-binding proteins
CES94_RS09250	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CES94_RS09255	SM00382	ATPases associated with a variety of cellular activities
CES94_RS09270	SM00644	CES94_RS09270
CES94_RS09335	SM00382	ATPases associated with a variety of cellular activities
CES94_RS09340	SM00357	Cold shock protein domain
CES94_RS09350	SM00382	ATPases associated with a variety of cellular activities
CES94_RS09350	SM01086	C-terminal, D2-small domain, of ClpB protein
CES94_RS09365	SM00316	Ribosomal protein S1-like RNA-binding domain
CES94_RS09380	SM00382	ATPases associated with a variety of cellular activities
CES94_RS09385	SM00382	ATPases associated with a variety of cellular activities
CES94_RS09400	SM00344	helix_turn_helix ASNC type
CES94_RS09405	SM00843	CES94_RS09405
CES94_RS09415	SM00382	ATPases associated with a variety of cellular activities
CES94_RS09425	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CES94_RS09485	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS09535	SM01022	CES94_RS09535
CES94_RS09560	SM00382	ATPases associated with a variety of cellular activities
CES94_RS09680	SM00857	Resolvase, N terminal domain
CES94_RS09765	SM00316	Ribosomal protein S1-like RNA-binding domain
CES94_RS09770	SM00411	bacterial (prokaryotic) histone like domain
CES94_RS09775	SM00849	Metallo-beta-lactamase superfamily
CES94_RS09780	SM00382	ATPases associated with a variety of cellular activities
CES94_RS09855	SM00849	Metallo-beta-lactamase superfamily
CES94_RS09890	SM00382	ATPases associated with a variety of cellular activities
CES94_RS09905	SM00062	Bacterial periplasmic substrate-binding proteins
CES94_RS09960	SM00981	CES94_RS09960
CES94_RS09965	SM00382	ATPases associated with a variety of cellular activities
CES94_RS10040	SM00851	MGS-like domain
CES94_RS10050	SM00881	CoA binding domain
CES94_RS10055	SM00992	Hemimethylated DNA-binding protein YccV like
CES94_RS10060	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CES94_RS10140	SM00226	Low molecular weight phosphatase family
CES94_RS10170	SM00357	Cold shock protein domain
CES94_RS10175	SM00357	Cold shock protein domain
CES94_RS10200	SM00073	Histidine Phosphotransfer domain
CES94_RS10200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS10200	SM00387	Histidine kinase-like ATPases
CES94_RS10200	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS10200	SM00448	cheY-homologous receiver domain
CES94_RS10210	SM00448	cheY-homologous receiver domain
CES94_RS10210	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS10235	SM00271	DnaJ molecular chaperone homology domain
CES94_RS10275	SM00903	Flavin reductase like domain
CES94_RS10385	SM00267	diguanylate cyclase
CES94_RS10415	SM00481	DNA polymerase alpha chain like domain
CES94_RS10445	SM00421	helix_turn_helix, Lux Regulon
CES94_RS10480	SM00506	Appr-1"-p processing enzyme
CES94_RS10485	SM00155	Phospholipase D. Active site motifs.
CES94_RS10535	SM00450	Rhodanese Homology Domain
CES94_RS10540	SM00867	YceI-like domain 
CES94_RS10620	SM00858	CES94_RS10620
CES94_RS10665	SM00047	Lysozyme subfamily 2
CES94_RS10680	SM00316	Ribosomal protein S1-like RNA-binding domain
CES94_RS10690	SM00363	S4 RNA-binding domain
CES94_RS10720	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CES94_RS10725	SM00822	CES94_RS10725
CES94_RS10735	SM00825	Beta-ketoacyl synthase
CES94_RS10830	SM00257	Lysin motif
CES94_RS10835	SM00487	DEAD-like helicases superfamily
CES94_RS10835	SM00490	helicase superfamily c-terminal domain
CES94_RS10835	SM00982	CES94_RS10835
CES94_RS10835	SM01058	CarD-like/TRCF domain
CES94_RS10850	SM00382	ATPases associated with a variety of cellular activities
CES94_RS10895	SM00382	ATPases associated with a variety of cellular activities
CES94_RS10910	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CES94_RS10915	SM00387	Histidine kinase-like ATPases
CES94_RS10920	SM00448	cheY-homologous receiver domain
CES94_RS10920	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS10950	SM01329	CES94_RS10950
CES94_RS10965	SM00422	helix_turn_helix, mercury resistance
CES94_RS10970	SM00052	Putative diguanylate phosphodiesterase
CES94_RS10970	SM01034	Sensors of blue-light using FAD
CES94_RS11000	SM00052	Putative diguanylate phosphodiesterase
CES94_RS11020	SM00869	Autotransporter beta-domain
CES94_RS11140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CES94_RS11155	SM01005	Alanine racemase, C-terminal domain
CES94_RS11160	SM01091	Transporter associated domain
CES94_RS11210	SM01120	CES94_RS11210
CES94_RS11220	SM00091	PAS domain
CES94_RS11220	SM00382	ATPases associated with a variety of cellular activities
CES94_RS11225	SM00869	Autotransporter beta-domain
CES94_RS11260	SM01400	CES94_RS11260
CES94_RS11280	SM00937	CES94_RS11280
CES94_RS11355	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS11355	SM00387	Histidine kinase-like ATPases
CES94_RS11370	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CES94_RS11435	SM00448	cheY-homologous receiver domain
CES94_RS11445	SM00528	Domain in histone-like proteins of HNS family
CES94_RS11490	SM00382	ATPases associated with a variety of cellular activities
CES94_RS11495	SM00382	ATPases associated with a variety of cellular activities
CES94_RS11505	SM00155	Phospholipase D. Active site motifs.
CES94_RS11600	SM00481	DNA polymerase alpha chain like domain
CES94_RS11615	SM00363	S4 RNA-binding domain
CES94_RS11625	SM00822	CES94_RS11625
CES94_RS11645	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CES94_RS11645	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CES94_RS11645	SM00493	CES94_RS11645
CES94_RS11685	SM00014	Acid phosphatase homologues
CES94_RS11695	SM00028	Tetratricopeptide repeats
CES94_RS11700	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CES94_RS11715	SM00420	helix_turn_helix, Deoxyribose operon repressor
CES94_RS11715	SM01134	CES94_RS11715
CES94_RS11735	SM00357	Cold shock protein domain
CES94_RS11735	SM00955	CES94_RS11735
CES94_RS11755	SM00382	ATPases associated with a variety of cellular activities
CES94_RS11760	SM00382	ATPases associated with a variety of cellular activities
CES94_RS11795	SM01230	CES94_RS11795
CES94_RS11805	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS11830	SM00382	ATPases associated with a variety of cellular activities
CES94_RS11855	SM00450	Rhodanese Homology Domain
CES94_RS11915	SM00382	ATPases associated with a variety of cellular activities
CES94_RS11925	SM00354	helix_turn _helix lactose operon repressor
CES94_RS11940	SM00091	PAS domain
CES94_RS11940	SM00382	ATPases associated with a variety of cellular activities
CES94_RS11950	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CES94_RS12000	SM00100	Cyclic nucleotide-monophosphate binding domain
CES94_RS12000	SM00419	helix_turn_helix, cAMP Regulatory protein
CES94_RS12025	SM00463	Small MutS-related domain
CES94_RS12030	SM00091	PAS domain
CES94_RS12030	SM00267	diguanylate cyclase
CES94_RS12045	SM00487	DEAD-like helicases superfamily
CES94_RS12045	SM00490	helicase superfamily c-terminal domain
CES94_RS12125	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS12170	SM00890	Domain of unknown function
CES94_RS12205	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS12330	SM00195	Dual specificity phosphatase, catalytic domain
CES94_RS12330	SM00404	Protein tyrosine phosphatase, catalytic domain motif
CES94_RS12340	SM00382	ATPases associated with a variety of cellular activities
CES94_RS12340	SM00487	DEAD-like helicases superfamily
CES94_RS12340	SM00490	helicase superfamily c-terminal domain
CES94_RS12340	SM00847	Helicase associated domain (HA2)  Add an annotation
CES94_RS12355	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CES94_RS12375	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CES94_RS12375	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS12375	SM00319	Homologues of the ligand binding domain of Tar
CES94_RS12385	SM01150	CES94_RS12385
CES94_RS12450	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS12470	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS12475	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CES94_RS12485	SM00382	ATPases associated with a variety of cellular activities
CES94_RS12540	SM00829	Enoylreductase
CES94_RS12545	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CES94_RS12545	SM00895	CES94_RS12545
CES94_RS12635	SM00903	Flavin reductase like domain
CES94_RS12665	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CES94_RS12690	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CES94_RS12710	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS12715	SM00829	Enoylreductase
CES94_RS12720	SM00919	Malic enzyme, NAD binding domain
CES94_RS12720	SM01274	CES94_RS12720
CES94_RS12745	SM00382	ATPases associated with a variety of cellular activities
CES94_RS12750	SM00382	ATPases associated with a variety of cellular activities
CES94_RS12775	SM00052	Putative diguanylate phosphodiesterase
CES94_RS12775	SM00267	diguanylate cyclase
CES94_RS12785	SM00267	diguanylate cyclase
CES94_RS12815	SM00382	ATPases associated with a variety of cellular activities
CES94_RS12830	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS12900	SM00829	Enoylreductase
CES94_RS12975	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS12985	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS13005	SM00487	DEAD-like helicases superfamily
CES94_RS13045	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CES94_RS13050	SM00450	Rhodanese Homology Domain
CES94_RS13150	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS13155	SM00869	Autotransporter beta-domain
CES94_RS13170	SM00382	ATPases associated with a variety of cellular activities
CES94_RS13190	SM01133	CES94_RS13190
CES94_RS13225	SM00267	diguanylate cyclase
CES94_RS13270	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS13280	SM00347	helix_turn_helix multiple antibiotic resistance protein
CES94_RS13285	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS13325	SM00267	diguanylate cyclase
CES94_RS13360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CES94_RS13360	SM00895	CES94_RS13360
CES94_RS13385	SM00857	Resolvase, N terminal domain
CES94_RS13405	SM00060	Fibronectin type 3 domain
CES94_RS13445	SM00635	Bacterial Ig-like domain 2
CES94_RS13550	SM00357	Cold shock protein domain
CES94_RS13575	SM00357	Cold shock protein domain
CES94_RS13580	SM00357	Cold shock protein domain
CES94_RS13635	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CES94_RS13670	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CES94_RS13675	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CES94_RS13775	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CES94_RS13775	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CES94_RS13805	SM00448	cheY-homologous receiver domain
CES94_RS13805	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS13810	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS13810	SM00387	Histidine kinase-like ATPases
CES94_RS13810	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS13865	SM00354	helix_turn _helix lactose operon repressor
CES94_RS13890	SM00857	Resolvase, N terminal domain
CES94_RS13970	SM00408	Immunoglobulin C-2 Type
CES94_RS13970	SM00409	Immunoglobulin
CES94_RS14155	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS14260	SM00857	Resolvase, N terminal domain
CES94_RS14695	SM00900	CES94_RS14695
CES94_RS14705	SM00478	endonuclease III
CES94_RS14705	SM00525	CES94_RS14705
CES94_RS14730	SM00363	S4 RNA-binding domain
CES94_RS14755	SM00347	helix_turn_helix multiple antibiotic resistance protein
CES94_RS14805	SM00479	CES94_RS14805
CES94_RS14810	SM00382	ATPases associated with a variety of cellular activities
CES94_RS14810	SM00487	DEAD-like helicases superfamily
CES94_RS14810	SM00490	helicase superfamily c-terminal domain
CES94_RS14845	SM00354	helix_turn _helix lactose operon repressor
CES94_RS14920	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
CES94_RS14945	SM00257	Lysin motif
CES94_RS14965	SM00382	ATPases associated with a variety of cellular activities
CES94_RS15075	SM00893	Electron transfer flavoprotein domain
CES94_RS15080	SM00893	Electron transfer flavoprotein domain
CES94_RS15155	SM00382	ATPases associated with a variety of cellular activities
CES94_RS15170	SM00411	bacterial (prokaryotic) histone like domain
CES94_RS15175	SM00873	B3/4 domain
CES94_RS15175	SM00874	tRNA synthetase B5 domain
CES94_RS15175	SM00896	Ferredoxin-fold anticodon binding domain
CES94_RS15200	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CES94_RS15265	SM01060	CES94_RS15265
CES94_RS15280	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS15315	SM00465	GIY-YIG type nucleases (URI domain)
CES94_RS15395	SM00382	ATPases associated with a variety of cellular activities
CES94_RS15400	SM00450	Rhodanese Homology Domain
CES94_RS15420	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CES94_RS15430	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CES94_RS15430	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CES94_RS15430	SM00493	CES94_RS15430
CES94_RS15460	SM00870	CES94_RS15460
CES94_RS15490	SM00420	helix_turn_helix, Deoxyribose operon repressor
CES94_RS15490	SM01134	CES94_RS15490
CES94_RS15520	SM00829	Enoylreductase
CES94_RS15545	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CES94_RS15565	SM00763	PrkA AAA domain
CES94_RS15575	SM00267	diguanylate cyclase
CES94_RS15580	SM00267	diguanylate cyclase
CES94_RS15600	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS15620	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CES94_RS15620	SM00267	diguanylate cyclase
CES94_RS15660	SM01329	CES94_RS15660
CES94_RS15680	SM00341	Helicase and RNase D C-terminal
CES94_RS15680	SM00474	3'-5' exonuclease
CES94_RS15700	SM00487	DEAD-like helicases superfamily
CES94_RS15700	SM00491	CES94_RS15700
CES94_RS15740	SM00052	Putative diguanylate phosphodiesterase
CES94_RS15745	SM01091	Transporter associated domain
CES94_RS15795	SM00357	Cold shock protein domain
CES94_RS15835	SM00346	helix_turn_helix isocitrate lyase regulation
CES94_RS15850	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CES94_RS15850	SM00245	tail specific protease
CES94_RS15855	SM00945	ProQ/FINO family
CES94_RS15860	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CES94_RS15920	SM00479	CES94_RS15920
CES94_RS15985	SM00257	Lysin motif
CES94_RS15995	SM00382	ATPases associated with a variety of cellular activities
CES94_RS16005	SM00382	ATPases associated with a variety of cellular activities
CES94_RS16010	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CES94_RS16095	SM00836	DALR anticodon binding domain
CES94_RS16095	SM01016	Arginyl tRNA synthetase N terminal dom
CES94_RS16125	SM00448	cheY-homologous receiver domain
CES94_RS16130	SM00448	cheY-homologous receiver domain
CES94_RS16135	SM00138	Methyltransferase, chemotaxis proteins 
CES94_RS16140	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CES94_RS16140	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS16140	SM00319	Homologues of the ligand binding domain of Tar
CES94_RS16145	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CES94_RS16145	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS16160	SM00319	Homologues of the ligand binding domain of Tar
CES94_RS16165	SM00260	Two component signalling adaptor domain
CES94_RS16170	SM00073	Histidine Phosphotransfer domain
CES94_RS16170	SM00260	Two component signalling adaptor domain
CES94_RS16170	SM00387	Histidine kinase-like ATPases
CES94_RS16170	SM01231	CES94_RS16170
CES94_RS16225	SM00382	ATPases associated with a variety of cellular activities
CES94_RS16305	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CES94_RS16305	SM00465	GIY-YIG type nucleases (URI domain)
CES94_RS16310	SM00421	helix_turn_helix, Lux Regulon
CES94_RS16310	SM00448	cheY-homologous receiver domain
CES94_RS16335	SM00382	ATPases associated with a variety of cellular activities
CES94_RS16350	SM00062	Bacterial periplasmic substrate-binding proteins
CES94_RS16350	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CES94_RS16390	SM00642	Alpha-amylase domain
CES94_RS16450	SM00382	ATPases associated with a variety of cellular activities
CES94_RS16500	SM00421	helix_turn_helix, Lux Regulon
CES94_RS16525	SM00267	diguanylate cyclase
CES94_RS16560	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CES94_RS16600	SM00387	Histidine kinase-like ATPases
CES94_RS16600	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS16605	SM00448	cheY-homologous receiver domain
CES94_RS16605	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS16610	SM00095	Transthyretin
CES94_RS16735	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS16820	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CES94_RS16820	SM00634	Bacterial Ig-like domain (group 1)
CES94_RS17015	SM00871	Bacterial transcription activator, effector binding domain
CES94_RS17020	SM00936	Penicillin-binding protein 5, C-terminal domain 
CES94_RS17025	SM00479	CES94_RS17025
CES94_RS17125	SM00984	UDP binding domain
CES94_RS17135	SM01350	CES94_RS17135
CES94_RS17290	SM00226	Low molecular weight phosphatase family
CES94_RS17300	SM00116	Domain in cystathionine beta-synthase and other proteins.
CES94_RS17300	SM01091	Transporter associated domain
CES94_RS17320	SM00052	Putative diguanylate phosphodiesterase
CES94_RS17320	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CES94_RS17320	SM00091	PAS domain
CES94_RS17320	SM00267	diguanylate cyclase
CES94_RS17325	SM00478	endonuclease III
CES94_RS17325	SM01009	AlkA N-terminal domain
CES94_RS17345	SM00327	von Willebrand factor (vWF) type A domain
CES94_RS17370	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS17370	SM00387	Histidine kinase-like ATPases
CES94_RS17370	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS17375	SM00448	cheY-homologous receiver domain
CES94_RS17375	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS17410	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CES94_RS17415	SM00420	helix_turn_helix, Deoxyribose operon repressor
CES94_RS17415	SM01134	CES94_RS17415
CES94_RS17420	SM00829	Enoylreductase
CES94_RS17450	SM01133	CES94_RS17450
CES94_RS17470	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CES94_RS17470	SM00866	CES94_RS17470
CES94_RS17475	SM00641	Glycosyl hydrolases family 25
CES94_RS17630	SM00382	ATPases associated with a variety of cellular activities
CES94_RS17640	SM00327	von Willebrand factor (vWF) type A domain
CES94_RS17660	SM00448	cheY-homologous receiver domain
CES94_RS17660	SM00850	LytTr DNA-binding domain
CES94_RS17665	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CES94_RS17670	SM00422	helix_turn_helix, mercury resistance
CES94_RS17685	SM00382	ATPases associated with a variety of cellular activities
CES94_RS17700	SM01217	CES94_RS17700
CES94_RS17795	SM00382	ATPases associated with a variety of cellular activities
CES94_RS17805	SM00354	helix_turn _helix lactose operon repressor
CES94_RS17870	SM00518	AP endonuclease family 2
CES94_RS17890	SM00100	Cyclic nucleotide-monophosphate binding domain
CES94_RS17935	SM00841	Elongation factor P, C-terminal
CES94_RS17935	SM01185	CES94_RS17935
CES94_RS17945	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CES94_RS17950	SM00014	Acid phosphatase homologues
CES94_RS17960	SM00052	Putative diguanylate phosphodiesterase
CES94_RS17980	SM00382	ATPases associated with a variety of cellular activities
CES94_RS18000	SM00363	S4 RNA-binding domain
CES94_RS18010	SM00487	DEAD-like helicases superfamily
CES94_RS18010	SM00490	helicase superfamily c-terminal domain
CES94_RS18040	SM00869	Autotransporter beta-domain
CES94_RS18050	SM00421	helix_turn_helix, Lux Regulon
CES94_RS18050	SM00448	cheY-homologous receiver domain
CES94_RS18090	SM00382	ATPases associated with a variety of cellular activities
CES94_RS18115	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CES94_RS18145	SM00382	ATPases associated with a variety of cellular activities
CES94_RS18155	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS18180	SM00387	Histidine kinase-like ATPases
CES94_RS18185	SM00421	helix_turn_helix, Lux Regulon
CES94_RS18185	SM00448	cheY-homologous receiver domain
CES94_RS18190	SM00387	Histidine kinase-like ATPases
CES94_RS18190	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS18190	SM00448	cheY-homologous receiver domain
CES94_RS18195	SM00091	PAS domain
CES94_RS18195	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS18195	SM00387	Histidine kinase-like ATPases
CES94_RS18195	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS18200	SM00382	ATPases associated with a variety of cellular activities
CES94_RS18200	SM00448	cheY-homologous receiver domain
CES94_RS18205	SM00882	Coenzyme A transferase
CES94_RS18210	SM00882	Coenzyme A transferase
CES94_RS18235	SM01359	CES94_RS18235
CES94_RS18235	SM01360	CES94_RS18235
CES94_RS18250	SM00434	DNA Topoisomerase IV
CES94_RS18260	SM00869	Autotransporter beta-domain
CES94_RS18340	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CES94_RS18350	SM00852	Probable molybdopterin binding domain
CES94_RS18415	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CES94_RS18450	SM00849	Metallo-beta-lactamase superfamily
CES94_RS18505	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CES94_RS18505	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CES94_RS18510	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CES94_RS18550	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CES94_RS18610	SM00905	Dihydroneopterin aldolase
CES94_RS18625	SM00382	ATPases associated with a variety of cellular activities
CES94_RS18640	SM00062	Bacterial periplasmic substrate-binding proteins
CES94_RS18645	SM00062	Bacterial periplasmic substrate-binding proteins
CES94_RS18690	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CES94_RS18715	SM00825	Beta-ketoacyl synthase
CES94_RS18755	SM00463	Small MutS-related domain
CES94_RS18860	SM00857	Resolvase, N terminal domain
CES94_RS19015	SM00778	Zinc-binding domain of primase-helicase
CES94_RS19175	SM00382	ATPases associated with a variety of cellular activities
CES94_RS19200	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS19325	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CES94_RS19410	SM00421	helix_turn_helix, Lux Regulon
CES94_RS19410	SM00448	cheY-homologous receiver domain
CES94_RS19415	SM00062	Bacterial periplasmic substrate-binding proteins
CES94_RS19415	SM00073	Histidine Phosphotransfer domain
CES94_RS19415	SM00387	Histidine kinase-like ATPases
CES94_RS19415	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS19415	SM00448	cheY-homologous receiver domain
CES94_RS19500	SM00387	Histidine kinase-like ATPases
CES94_RS19505	SM00448	cheY-homologous receiver domain
CES94_RS19505	SM00850	LytTr DNA-binding domain
CES94_RS19510	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS19635	SM00448	cheY-homologous receiver domain
CES94_RS19635	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS19640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS19640	SM00387	Histidine kinase-like ATPases
CES94_RS19640	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS19665	SM00028	Tetratricopeptide repeats
CES94_RS19680	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS19690	SM00421	helix_turn_helix, Lux Regulon
CES94_RS19690	SM00448	cheY-homologous receiver domain
CES94_RS19735	SM00840	CES94_RS19735
CES94_RS19760	SM01001	AIR carboxylase
CES94_RS19820	SM00346	helix_turn_helix isocitrate lyase regulation
CES94_RS19835	SM00450	Rhodanese Homology Domain
CES94_RS19850	SM00382	ATPases associated with a variety of cellular activities
CES94_RS19860	SM00822	CES94_RS19860
CES94_RS19875	SM00382	ATPases associated with a variety of cellular activities
CES94_RS19880	SM00244	prohibitin homologues
CES94_RS19890	SM00422	helix_turn_helix, mercury resistance
CES94_RS19915	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS19980	SM00387	Histidine kinase-like ATPases
CES94_RS19985	SM00493	CES94_RS19985
CES94_RS19995	SM00382	ATPases associated with a variety of cellular activities
CES94_RS20060	SM01266	CES94_RS20060
CES94_RS20070	SM00052	Putative diguanylate phosphodiesterase
CES94_RS20105	SM00938	Nitrogen regulatory protein P-II
CES94_RS20110	SM00382	ATPases associated with a variety of cellular activities
CES94_RS20115	SM00382	ATPases associated with a variety of cellular activities
CES94_RS20120	SM00344	helix_turn_helix ASNC type
CES94_RS20145	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CES94_RS20155	SM00411	bacterial (prokaryotic) histone like domain
CES94_RS20160	SM00382	ATPases associated with a variety of cellular activities
CES94_RS20160	SM00464	Found in ATP-dependent protease La (LON)
CES94_RS20165	SM00382	ATPases associated with a variety of cellular activities
CES94_RS20165	SM00994	ClpX C4-type zinc finger
CES94_RS20165	SM01086	C-terminal, D2-small domain, of ClpB protein
CES94_RS20250	SM00981	CES94_RS20250
CES94_RS20270	SM00861	Transketolase, pyrimidine binding domain
CES94_RS20320	SM00507	HNH nucleases
CES94_RS20335	SM01323	CES94_RS20335
CES94_RS20355	SM00642	Alpha-amylase domain
CES94_RS20370	SM00091	PAS domain
CES94_RS20370	SM00387	Histidine kinase-like ATPases
CES94_RS20370	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS20375	SM00448	cheY-homologous receiver domain
CES94_RS20375	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS20450	SM00267	diguanylate cyclase
CES94_RS20460	SM00098	Alkaline phosphatase homologues
CES94_RS20515	SM00869	Autotransporter beta-domain
CES94_RS20540	SM00421	helix_turn_helix, Lux Regulon
CES94_RS20545	SM00421	helix_turn_helix, Lux Regulon
CES94_RS20600	SM00749	bacterial OsmY and nodulation domain
CES94_RS20630	SM01133	CES94_RS20630
CES94_RS20635	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CES94_RS20665	SM00382	ATPases associated with a variety of cellular activities
CES94_RS20670	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS20675	SM00382	ATPases associated with a variety of cellular activities
CES94_RS20700	SM00855	Phosphoglycerate mutase family
CES94_RS20705	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS20705	SM00871	Bacterial transcription activator, effector binding domain
CES94_RS20715	SM00448	cheY-homologous receiver domain
CES94_RS20715	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS20720	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS20720	SM00387	Histidine kinase-like ATPases
CES94_RS20720	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS20730	SM00448	cheY-homologous receiver domain
CES94_RS20730	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS20785	SM00852	Probable molybdopterin binding domain
CES94_RS20810	SM00271	DnaJ molecular chaperone homology domain
CES94_RS20870	SM00904	Riboflavin kinase
CES94_RS20910	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CES94_RS20915	SM00851	MGS-like domain
CES94_RS20915	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CES94_RS20960	SM00893	Electron transfer flavoprotein domain
CES94_RS20965	SM00893	Electron transfer flavoprotein domain
CES94_RS21020	SM00650	Ribosomal RNA adenine dimethylases
CES94_RS21040	SM00271	DnaJ molecular chaperone homology domain
CES94_RS21050	SM00487	DEAD-like helicases superfamily
CES94_RS21050	SM00490	helicase superfamily c-terminal domain
CES94_RS21055	SM00486	DNA polymerase type-B family
CES94_RS21060	SM01007	Class II Aldolase and Adducin N-terminal domain
CES94_RS21080	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS21090	SM00382	ATPases associated with a variety of cellular activities
CES94_RS21130	SM01329	CES94_RS21130
CES94_RS21135	SM00917	LeuA allosteric (dimerisation) domain
CES94_RS21165	SM00354	helix_turn _helix lactose operon repressor
CES94_RS21240	SM00842	Cell division protein FtsA
CES94_RS21245	SM00864	Tubulin/FtsZ family, GTPase domain
CES94_RS21245	SM00865	Tubulin/FtsZ family, C-terminal domain
CES94_RS21260	SM00957	SecA DEAD-like domain
CES94_RS21260	SM00958	SecA preprotein cross-linking domain
CES94_RS21285	SM01240	CES94_RS21285
CES94_RS21315	SM00644	CES94_RS21315
CES94_RS21330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CES94_RS21330	SM00895	CES94_RS21330
CES94_RS21395	SM00564	beta-propeller repeat
CES94_RS21405	SM00947	Carbonic anhydrase
CES94_RS21410	SM00382	ATPases associated with a variety of cellular activities
CES94_RS21535	SM00487	DEAD-like helicases superfamily
CES94_RS21535	SM00490	helicase superfamily c-terminal domain
CES94_RS21535	SM00847	Helicase associated domain (HA2)  Add an annotation
CES94_RS21555	SM00382	ATPases associated with a variety of cellular activities
CES94_RS21600	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CES94_RS21610	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CES94_RS21635	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CES94_RS21690	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CES94_RS21700	SM00935	Outer membrane protein (OmpH-like)
CES94_RS21730	SM00481	DNA polymerase alpha chain like domain
CES94_RS21750	SM00977	TilS substrate C-terminal domain
CES94_RS21765	SM01322	CES94_RS21765
CES94_RS21810	SM00382	ATPases associated with a variety of cellular activities
CES94_RS21810	SM00930	CES94_RS21810
CES94_RS21870	SM00257	Lysin motif
CES94_RS21875	SM00849	Metallo-beta-lactamase superfamily
CES94_RS21890	SM00479	CES94_RS21890
CES94_RS22000	SM00487	DEAD-like helicases superfamily
CES94_RS22000	SM00490	helicase superfamily c-terminal domain
CES94_RS22065	SM00382	ATPases associated with a variety of cellular activities
CES94_RS22065	SM01086	C-terminal, D2-small domain, of ClpB protein
CES94_RS22070	SM00155	Phospholipase D. Active site motifs.
CES94_RS22075	SM00382	ATPases associated with a variety of cellular activities
CES94_RS22115	SM00382	ATPases associated with a variety of cellular activities
CES94_RS22145	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CES94_RS22265	SM01321	CES94_RS22265
CES94_RS22330	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CES94_RS22415	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CES94_RS22465	SM00382	ATPases associated with a variety of cellular activities
CES94_RS22475	SM00382	ATPases associated with a variety of cellular activities
CES94_RS22475	SM01086	C-terminal, D2-small domain, of ClpB protein
CES94_RS22565	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CES94_RS22590	SM00382	ATPases associated with a variety of cellular activities
CES94_RS22655	SM00829	Enoylreductase
CES94_RS22695	SM00382	ATPases associated with a variety of cellular activities
CES94_RS22735	SM00947	Carbonic anhydrase
CES94_RS22740	SM01116	CES94_RS22740
CES94_RS22750	SM01266	CES94_RS22750
CES94_RS22760	SM01038	Beta galactosidase small chain
CES94_RS22770	SM00354	helix_turn _helix lactose operon repressor
CES94_RS22775	SM00346	helix_turn_helix isocitrate lyase regulation
CES94_RS22800	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CES94_RS22825	SM00829	Enoylreductase
CES94_RS22870	SM00062	Bacterial periplasmic substrate-binding proteins
CES94_RS22875	SM00382	ATPases associated with a variety of cellular activities
CES94_RS22890	SM01004	Delta-aminolevulinic acid dehydratase
CES94_RS22925	SM00382	ATPases associated with a variety of cellular activities
CES94_RS22940	SM00829	Enoylreductase
CES94_RS22945	SM00895	CES94_RS22945
CES94_RS22955	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CES94_RS22955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS22955	SM00319	Homologues of the ligand binding domain of Tar
CES94_RS22980	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CES94_RS23075	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CES94_RS23075	SM00895	CES94_RS23075
CES94_RS23215	SM00829	Enoylreductase
CES94_RS23285	SM00822	CES94_RS23285
CES94_RS23325	SM00831	Cation transporter/ATPase, N-terminus
CES94_RS23330	SM00354	helix_turn _helix lactose operon repressor
CES94_RS23340	SM00642	Alpha-amylase domain
CES94_RS23390	SM00382	ATPases associated with a variety of cellular activities
CES94_RS23410	SM00966	SpoVT / AbrB like domain 
CES94_RS23440	SM01091	Transporter associated domain
CES94_RS23535	SM00882	Coenzyme A transferase
CES94_RS23585	SM01007	Class II Aldolase and Adducin N-terminal domain
CES94_RS23595	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CES94_RS23620	SM00420	helix_turn_helix, Deoxyribose operon repressor
CES94_RS23620	SM01134	CES94_RS23620
CES94_RS23675	SM00858	CES94_RS23675
CES94_RS23695	SM01130	CES94_RS23695
CES94_RS23705	SM00346	helix_turn_helix isocitrate lyase regulation
CES94_RS23710	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CES94_RS23715	SM00316	Ribosomal protein S1-like RNA-binding domain
CES94_RS23715	SM00357	Cold shock protein domain
CES94_RS23715	SM00955	CES94_RS23715
CES94_RS23725	SM00788	Adenylosuccinate synthetase
CES94_RS23735	SM00244	prohibitin homologues
CES94_RS23740	SM00244	prohibitin homologues
CES94_RS23760	SM00853	MutL C terminal dimerisation domain
CES94_RS23760	SM01340	CES94_RS23760
CES94_RS23765	SM00646	CES94_RS23765
CES94_RS23800	SM00479	CES94_RS23800
CES94_RS23880	SM00841	Elongation factor P, C-terminal
CES94_RS23880	SM01185	CES94_RS23880
CES94_RS23905	SM00883	Chaperonin 10 Kd subunit
CES94_RS24035	SM00354	helix_turn _helix lactose operon repressor
CES94_RS24050	SM00487	DEAD-like helicases superfamily
CES94_RS24075	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS24130	SM00091	PAS domain
CES94_RS24130	SM00387	Histidine kinase-like ATPases
CES94_RS24135	SM00448	cheY-homologous receiver domain
CES94_RS24175	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS24185	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS24200	SM00448	cheY-homologous receiver domain
CES94_RS24200	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS24205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS24205	SM00387	Histidine kinase-like ATPases
CES94_RS24205	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS24245	SM00382	ATPases associated with a variety of cellular activities
CES94_RS24260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CES94_RS24260	SM00866	CES94_RS24260
CES94_RS24285	SM00382	ATPases associated with a variety of cellular activities
CES94_RS24290	SM00382	ATPases associated with a variety of cellular activities
CES94_RS24300	SM00072	Guanylate kinase homologues.
CES94_RS24325	SM00849	Metallo-beta-lactamase superfamily
CES94_RS24355	SM00671	Sel1-like repeats.
CES94_RS24370	SM00028	Tetratricopeptide repeats
CES94_RS24455	SM00422	helix_turn_helix, mercury resistance
CES94_RS24460	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS24465	SM00052	Putative diguanylate phosphodiesterase
CES94_RS24485	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CES94_RS24625	SM01005	Alanine racemase, C-terminal domain
CES94_RS24630	SM00382	ATPases associated with a variety of cellular activities
CES94_RS24635	SM00829	Enoylreductase
CES94_RS24695	SM00563	Phosphate acyltransferases
CES94_RS24735	SM00382	ATPases associated with a variety of cellular activities
CES94_RS24820	SM00363	S4 RNA-binding domain
CES94_RS24835	SM01018	B12 binding domain
CES94_RS24840	SM00346	helix_turn_helix isocitrate lyase regulation
CES94_RS24900	SM00798	AICARFT/IMPCHase bienzyme
CES94_RS24900	SM00851	MGS-like domain
CES94_RS24905	SM01209	CES94_RS24905
CES94_RS24905	SM01210	CES94_RS24905
CES94_RS24910	SM00382	ATPases associated with a variety of cellular activities
CES94_RS24910	SM00448	cheY-homologous receiver domain
CES94_RS24915	SM00387	Histidine kinase-like ATPases
CES94_RS24915	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS24935	SM00411	bacterial (prokaryotic) histone like domain
CES94_RS24990	SM00876	Biotin and Thiamin Synthesis associated domain
CES94_RS25000	SM00663	RNA polymerase I subunit A N-terminus
CES94_RS25030	SM00649	Ribosomal protein L11/L12
CES94_RS25035	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CES94_RS25035	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CES94_RS25165	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CES94_RS25185	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS25315	SM00487	DEAD-like helicases superfamily
CES94_RS25315	SM00490	helicase superfamily c-terminal domain
CES94_RS25320	SM00354	helix_turn _helix lactose operon repressor
CES94_RS25335	SM00382	ATPases associated with a variety of cellular activities
CES94_RS25335	SM01086	C-terminal, D2-small domain, of ClpB protein
CES94_RS25570	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS25635	SM00448	cheY-homologous receiver domain
CES94_RS25635	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS25640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS25640	SM00387	Histidine kinase-like ATPases
CES94_RS25640	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS25670	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS25675	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS25690	SM01007	Class II Aldolase and Adducin N-terminal domain
CES94_RS25735	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CES94_RS25790	SM00420	helix_turn_helix, Deoxyribose operon repressor
CES94_RS25790	SM01134	CES94_RS25790
CES94_RS25805	SM01133	CES94_RS25805
CES94_RS25850	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CES94_RS25850	SM00866	CES94_RS25850
CES94_RS25865	SM01230	CES94_RS25865
CES94_RS25870	SM00091	PAS domain
CES94_RS25870	SM00387	Histidine kinase-like ATPases
CES94_RS25870	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS25875	SM00382	ATPases associated with a variety of cellular activities
CES94_RS25875	SM00448	cheY-homologous receiver domain
CES94_RS25885	SM00729	Elongator protein 3, MiaB family, Radical SAM
CES94_RS25905	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CES94_RS25905	SM00474	3'-5' exonuclease
CES94_RS25905	SM00475	5'-3' exonuclease
CES94_RS25905	SM00482	DNA polymerase A domain
CES94_RS25915	SM00563	Phosphate acyltransferases
CES94_RS26015	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CES94_RS26105	SM00341	Helicase and RNase D C-terminal
CES94_RS26105	SM00487	DEAD-like helicases superfamily
CES94_RS26105	SM00490	helicase superfamily c-terminal domain
CES94_RS26105	SM00956	CES94_RS26105
CES94_RS26195	SM01219	CES94_RS26195
CES94_RS26300	SM00984	UDP binding domain
CES94_RS26325	SM00357	Cold shock protein domain
CES94_RS26325	SM00382	ATPases associated with a variety of cellular activities
CES94_RS26325	SM00959	Rho termination factor, N-terminal domain
CES94_RS26340	SM00487	DEAD-like helicases superfamily
CES94_RS26340	SM00490	helicase superfamily c-terminal domain
CES94_RS26410	SM00382	ATPases associated with a variety of cellular activities
CES94_RS26455	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CES94_RS26455	SM00895	CES94_RS26455
CES94_RS26465	SM00354	helix_turn _helix lactose operon repressor
CES94_RS26485	SM00382	ATPases associated with a variety of cellular activities
CES94_RS26500	SM00382	ATPases associated with a variety of cellular activities
CES94_RS26505	SM00327	von Willebrand factor (vWF) type A domain
CES94_RS26515	SM00344	helix_turn_helix ASNC type
CES94_RS26525	SM01228	CES94_RS26525
CES94_RS26570	SM00382	ATPases associated with a variety of cellular activities
CES94_RS26625	SM00382	ATPases associated with a variety of cellular activities
CES94_RS26635	SM01061	CAT RNA binding domain
CES94_RS26750	SM01234	CES94_RS26750
CES94_RS26880	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CES94_RS26880	SM00866	CES94_RS26880
CES94_RS26895	SM00062	Bacterial periplasmic substrate-binding proteins
CES94_RS26905	SM00382	ATPases associated with a variety of cellular activities
CES94_RS26950	SM00857	Resolvase, N terminal domain
CES94_RS26965	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS26975	SM00267	diguanylate cyclase
CES94_RS26990	SM00857	Resolvase, N terminal domain
CES94_RS27010	SM00422	helix_turn_helix, mercury resistance
CES94_RS27035	SM00422	helix_turn_helix, mercury resistance
CES94_RS27065	SM00155	Phospholipase D. Active site motifs.
CES94_RS27075	SM00255	Toll - interleukin 1 - resistance
CES94_RS27100	SM00857	Resolvase, N terminal domain
CES94_RS27120	SM00382	ATPases associated with a variety of cellular activities
CES94_RS27185	SM00530	Helix-turn-helix XRE-family like proteins 
CES94_RS27200	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CES94_RS27295	SM00953	CES94_RS27295
CES94_RS27415	SM00470	ParB-like nuclease domain
CES94_RS27505	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CES94_RS27540	SM00966	SpoVT / AbrB like domain 
CES94_RS27600	SM00470	ParB-like nuclease domain
CES94_RS27655	SM00421	helix_turn_helix, Lux Regulon
CES94_RS27710	SM00422	helix_turn_helix, mercury resistance
CES94_RS27735	SM00422	helix_turn_helix, mercury resistance
CES94_RS27775	SM00986	Uracil DNA glycosylase superfamily
CES94_RS27775	SM00987	UreE urease accessory protein, C-terminal domain 
CES94_RS27790	SM00342	helix_turn_helix, arabinose operon control protein
CES94_RS27830	SM00857	Resolvase, N terminal domain
CES94_RS27875	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CES94_RS27920	SM00857	Resolvase, N terminal domain
CES94_RS27935	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS27935	SM00387	Histidine kinase-like ATPases
CES94_RS27935	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS27940	SM00448	cheY-homologous receiver domain
CES94_RS27940	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS27985	SM00746	metallochaperone-like domain
CES94_RS28020	SM00448	cheY-homologous receiver domain
CES94_RS28020	SM00862	Transcriptional regulatory protein, C terminal
CES94_RS28025	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CES94_RS28025	SM00387	Histidine kinase-like ATPases
CES94_RS28025	SM00388	His Kinase A (phosphoacceptor) domain
CES94_RS28050	SM00470	ParB-like nuclease domain
CES94_RS28370	SM00155	Phospholipase D. Active site motifs.
CES94_RS28440	SM00528	Domain in histone-like proteins of HNS family
CES94_RS28490	SM00857	Resolvase, N terminal domain
CES94_RS28630	SM00857	Resolvase, N terminal domain
CES94_RS28780	SM00857	Resolvase, N terminal domain
CES94_RS28815	SM00220	Serine/Threonine protein kinases, catalytic domain
CES94_RS28820	SM00382	ATPases associated with a variety of cellular activities
CES94_RS28870	SM00528	Domain in histone-like proteins of HNS family
CES94_RS28880	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CES94_RS28880	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CES94_RS28880	SM00493	CES94_RS28880
CES94_RS28900	SM00318	Staphylococcal nuclease homologues
CES94_RS28985	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CES94_RS29030	SM00271	DnaJ molecular chaperone homology domain
